Query lcl|Aclame:protein:vir:9702|NCBI_annot:hypothetical protein|genbank:acc:NP_795464;genbank:gi:28876227;genbank:GeneID:1257772 Match_columns 406 No_of_seqs 129 out of 1076 Neff 9.9 Searched_HMMs 1612 Date Sat Nov 30 07:59:35 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_36 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_36_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:9702 Length: 406 # 100.0 4E-108 2E-111 609.4 44.7 406 1-406 1-406 (406) 2 protein:vir:3868 Length: 417 # 100.0 2E-101 1E-104 573.0 44.1 406 1-406 1-409 (417) 3 protein:vir:100249 Length: 431 100.0 2.1E-95 1.3E-98 539.7 41.7 387 1-390 1-431 (431) 4 protein:vir:98396 Length: 441 100.0 3.9E-95 2.4E-98 538.1 42.8 396 1-401 26-441 (441) 5 protein:vir:4598 Length: 416 # 100.0 5.7E-95 3.5E-98 537.3 43.3 396 1-401 1-416 (416) 6 protein:vir:81095 Length: 416 100.0 5.7E-95 3.5E-98 537.3 43.3 396 1-401 1-416 (416) 7 protein:vir:79984 Length: 441 100.0 9.4E-95 5.8E-98 536.1 43.5 396 1-401 26-441 (441) 8 protein:vir:9408 Length: 441 # 100.0 9.4E-95 5.8E-98 536.1 43.5 396 1-401 26-441 (441) 9 protein:vir:1380 Length: 422 # 100.0 1.6E-94 1E-97 534.7 42.6 392 1-402 1-422 (422) 10 protein:vir:4454 Length: 414 # 100.0 2.9E-94 1.8E-97 533.4 43.0 394 1-406 1-412 (414) 11 protein:vir:100150 Length: 437 100.0 6.8E-94 4.2E-97 531.4 43.1 402 1-406 1-433 (437) 12 protein:vir:81072 Length: 432 100.0 8.2E-94 5.1E-97 530.9 42.5 398 1-405 7-432 (432) 13 protein:vir:105064 Length: 421 100.0 9.4E-94 5.8E-97 530.6 42.2 398 1-406 1-421 (421) 14 protein:vir:483 Length: 413 # 100.0 3.5E-93 2.2E-96 527.5 43.7 396 1-406 4-413 (413) 15 protein:vir:4337 Length: 434 # 100.0 3.2E-93 2E-96 527.7 42.8 399 1-406 18-434 (434) 16 protein:vir:102080 Length: 429 100.0 6.1E-93 3.8E-96 526.1 44.0 397 1-406 1-424 (429) 17 protein:vir:81152 Length: 411 100.0 2.9E-93 1.8E-96 527.9 42.1 386 1-399 1-411 (411) 18 protein:vir:105002 Length: 432 100.0 6E-93 3.7E-96 526.2 43.5 401 1-406 1-431 (432) 19 protein:vir:102855 Length: 432 100.0 6E-93 3.7E-96 526.2 43.5 401 1-406 1-431 (432) 20 protein:vir:107605 Length: 432 100.0 6E-93 3.7E-96 526.2 43.5 401 1-406 1-431 (432) 21 protein:vir:10362 Length: 432 100.0 3.4E-93 2.1E-96 527.5 42.1 398 1-405 7-432 (432) 22 protein:vir:97060 Length: 432 100.0 8.4E-93 5.2E-96 525.4 42.0 398 1-405 7-432 (432) 23 protein:vir:102118 Length: 409 100.0 2.5E-92 1.6E-95 522.8 42.9 390 1-399 1-409 (409) 24 protein:vir:5737 Length: 419 # 100.0 2.2E-92 1.4E-95 523.1 40.7 398 1-406 1-419 (419) 25 protein:vir:1431 Length: 419 # 100.0 7.5E-92 4.7E-95 520.2 42.2 393 1-406 1-414 (419) 26 protein:vir:189 Length: 424 # 100.0 6E-92 3.7E-95 520.7 41.3 388 1-398 14-424 (424) 27 protein:vir:1266 Length: 416 # 100.0 1.9E-91 1.2E-94 517.9 43.7 396 1-403 1-416 (416) 28 protein:vir:1884 Length: 424 # 100.0 1.4E-91 8.4E-95 518.7 41.5 387 1-398 14-424 (424) 29 protein:vir:4509 Length: 424 # 100.0 1.8E-91 1.1E-94 518.1 42.0 390 1-401 16-424 (424) 30 protein:vir:2683 Length: 412 # 100.0 2.5E-91 1.5E-94 517.3 41.9 390 1-404 1-412 (412) 31 protein:vir:6240 Length: 457 # 100.0 4.2E-91 2.6E-94 516.0 43.0 404 1-406 1-451 (457) 32 protein:vir:93610 Length: 454 100.0 7.9E-91 4.9E-94 514.5 43.8 400 1-406 2-433 (454) 33 protein:vir:80333 Length: 419 100.0 1.1E-90 6.9E-94 513.7 41.2 390 1-406 1-411 (419) 34 protein:vir:96980 Length: 409 100.0 1.6E-90 1E-93 512.8 41.5 390 1-404 4-409 (409) 35 protein:vir:1326 Length: 457 # 100.0 3.2E-90 2E-93 511.2 42.9 403 1-406 1-457 (457) 36 protein:vir:94426 Length: 409 100.0 2E-89 1.2E-92 506.9 41.8 390 1-404 1-409 (409) 37 protein:vir:93943 Length: 409 100.0 2.6E-89 1.6E-92 506.3 41.4 390 1-404 1-409 (409) 38 protein:vir:7853 Length: 518 # 100.0 9.9E-89 6.1E-92 503.1 42.4 404 1-406 1-436 (518) 39 protein:vir:101648 Length: 518 100.0 1.4E-88 8.7E-92 502.2 42.5 404 1-406 1-436 (518) 40 protein:vir:8418 Length: 409 # 100.0 1.4E-88 9E-92 502.2 42.0 391 1-403 1-409 (409) 41 protein:vir:101647 Length: 460 100.0 2.8E-87 1.7E-90 495.1 43.3 396 1-403 1-460 (460) 42 protein:vir:81218 Length: 423 100.0 2.2E-86 1.3E-89 490.2 39.7 389 1-402 1-423 (423) 43 protein:vir:6210 Length: 394 # 100.0 3.1E-86 1.9E-89 489.4 38.3 381 1-402 1-394 (394) 44 protein:vir:94666 Length: 723 100.0 1.2E-85 7.5E-89 486.1 39.0 396 1-406 1-446 (723) 45 protein:vir:3843 Length: 397 # 100.0 1.7E-84 1E-87 479.9 41.9 381 1-405 1-397 (397) 46 protein:vir:80134 Length: 403 100.0 4.5E-84 2.8E-87 477.5 39.7 385 1-406 1-402 (403) 47 protein:vir:95378 Length: 406 100.0 2.1E-83 1.3E-86 473.9 41.4 385 1-406 1-405 (406) 48 protein:vir:8100 Length: 466 # 100.0 2.1E-83 1.3E-86 473.9 40.4 394 1-402 1-466 (466) 49 protein:vir:104259 Length: 403 100.0 1.7E-83 1.1E-86 474.3 39.7 382 1-406 1-403 (403) 50 protein:vir:960 Length: 413 # 100.0 2.7E-83 1.7E-86 473.2 40.5 377 1-399 13-413 (413) 51 protein:vir:102727 Length: 945 100.0 6.4E-83 4E-86 471.2 41.3 402 1-406 62-533 (945) 52 protein:vir:8317 Length: 409 # 100.0 5.9E-83 3.6E-86 471.4 37.2 362 1-378 1-409 (409) 53 protein:vir:9359 Length: 348 # 100.0 7.6E-81 4.7E-84 459.8 38.9 340 52-404 1-348 (348) 54 protein:vir:95965 Length: 385 100.0 3.6E-81 2.2E-84 461.6 35.6 370 1-402 1-385 (385) 55 protein:vir:100187 Length: 385 100.0 2.6E-80 1.6E-83 456.9 40.2 368 1-402 1-385 (385) 56 protein:vir:4854 Length: 386 # 100.0 2.6E-80 1.6E-83 456.9 39.9 373 1-403 1-386 (386) 57 protein:vir:9507 Length: 395 # 100.0 1.6E-80 9.9E-84 458.1 38.3 381 1-404 1-395 (395) 58 protein:vir:100650 Length: 395 100.0 1.6E-80 9.9E-84 458.1 38.3 381 1-404 1-395 (395) 59 protein:vir:101289 Length: 395 100.0 1.6E-80 9.9E-84 458.1 38.3 381 1-404 1-395 (395) 60 protein:vir:4089 Length: 395 # 100.0 2.5E-79 1.5E-82 451.5 35.2 382 1-406 1-395 (395) 61 protein:vir:1082 Length: 359 # 100.0 1.8E-78 1.1E-81 446.8 38.4 345 1-364 1-359 (359) 62 protein:vir:9641 Length: 395 # 100.0 8.1E-79 5E-82 448.7 35.9 379 1-405 1-395 (395) 63 protein:vir:100882 Length: 383 100.0 1E-77 6.2E-81 442.7 39.9 366 1-400 1-383 (383) 64 protein:vir:7407 Length: 392 # 100.0 7.9E-78 4.9E-81 443.3 38.9 372 1-404 3-392 (392) 65 protein:vir:78310 Length: 376 100.0 4.3E-78 2.7E-81 444.7 35.8 366 1-401 1-376 (376) 66 protein:vir:4828 Length: 382 # 100.0 2.5E-77 1.6E-80 440.5 39.7 369 1-403 1-382 (382) 67 protein:vir:98643 Length: 395 100.0 8.9E-78 5.5E-81 443.0 36.7 380 1-405 1-395 (395) 68 protein:vir:80796 Length: 574 100.0 1.2E-76 7.1E-80 436.9 41.5 400 1-406 63-521 (574) 69 protein:vir:94002 Length: 378 100.0 1.2E-77 7.5E-81 442.3 35.2 355 1-402 1-378 (378) 70 protein:vir:1023 Length: 392 # 100.0 5.9E-77 3.7E-80 438.5 38.9 369 1-404 3-392 (392) 71 protein:vir:3989 Length: 392 # 100.0 5.9E-77 3.7E-80 438.5 38.9 369 1-404 3-392 (392) 72 protein:vir:1661 Length: 378 # 100.0 2.3E-77 1.4E-80 440.8 35.0 355 1-402 1-378 (378) 73 protein:vir:93867 Length: 378 100.0 2.8E-77 1.7E-80 440.3 34.9 355 1-402 1-378 (378) 74 protein:vir:4952 Length: 386 # 100.0 1E-75 6.5E-79 431.7 40.1 373 1-403 1-386 (386) 75 protein:vir:100691 Length: 535 100.0 4E-74 2.5E-77 423.0 41.0 400 1-406 53-524 (535) 76 protein:vir:80644 Length: 551 100.0 8.3E-74 5.1E-77 421.2 41.9 401 1-406 31-525 (551) 77 protein:vir:96579 Length: 576 100.0 1.2E-73 7.3E-77 420.4 39.6 402 1-406 32-518 (576) 78 protein:vir:4995 Length: 384 # 100.0 7.4E-74 4.6E-77 421.5 37.5 359 1-372 1-384 (384) 79 protein:vir:63755 Length: 547 100.0 1.4E-72 8.9E-76 414.5 41.8 401 1-406 31-512 (547) 80 protein:vir:858 Length: 378 # 100.0 1.4E-73 8.5E-77 420.0 34.8 351 1-402 1-378 (378) 81 protein:vir:94869 Length: 378 100.0 2.3E-73 1.5E-76 418.8 33.9 354 1-402 1-378 (378) 82 protein:vir:95599 Length: 563 100.0 8.3E-72 5.1E-75 410.3 40.5 402 1-406 43-532 (563) 83 protein:vir:99312 Length: 563 100.0 8.3E-72 5.1E-75 410.3 40.5 402 1-406 43-532 (563) 84 protein:vir:4194 Length: 540 # 100.0 2.4E-70 1.5E-73 402.3 36.2 390 1-406 6-461 (540) 85 protein:vir:4156 Length: 542 # 100.0 2.7E-69 1.7E-72 396.5 36.9 390 3-406 1-455 (542) 86 protein:vir:3153 Length: 467 # 100.0 2.2E-68 1.4E-71 391.5 37.9 371 31-406 1-451 (467) 87 protein:vir:99452 Length: 651 100.0 8.2E-66 5.1E-69 377.4 34.7 391 1-406 1-530 (651) 88 protein:vir:79772 Length: 648 100.0 6.8E-65 4.2E-68 372.4 36.4 398 1-406 34-502 (648) 89 protein:vir:78641 Length: 278 100.0 2.5E-61 1.6E-64 352.8 32.2 274 52-332 1-278 (278) 90 protein:vir:100328 Length: 346 100.0 5.2E-52 3.2E-55 301.8 29.3 316 1-337 1-346 (346) 91 protein:vir:267 Length: 348 # 100.0 5.6E-52 3.5E-55 301.5 28.3 322 1-340 1-348 (348) 92 protein:vir:79150 Length: 368 100.0 7.9E-52 4.9E-55 300.8 28.4 324 1-344 1-368 (368) 93 protein:vir:4698 Length: 251 # 100.0 5.1E-52 3.2E-55 301.8 26.8 239 1-241 1-251 (251) 94 protein:vir:78749 Length: 337 100.0 9.3E-52 5.8E-55 300.4 27.7 318 1-333 1-337 (337) 95 protein:vir:103971 Length: 376 100.0 1.8E-50 1.1E-53 293.3 31.4 326 1-339 26-376 (376) 96 protein:vir:79207 Length: 351 100.0 5.4E-50 3.3E-53 290.7 30.2 321 1-339 1-351 (351) 97 protein:vir:78191 Length: 351 100.0 1.1E-49 6.5E-53 289.1 30.2 321 1-339 1-351 (351) 98 protein:vir:98567 Length: 340 100.0 2.6E-49 1.6E-52 287.0 30.3 315 1-336 1-340 (340) 99 protein:vir:1150 Length: 350 # 100.0 5.1E-50 3.2E-53 290.8 26.3 317 1-332 1-350 (350) 100 protein:vir:6058 Length: 344 # 100.0 6.8E-49 4.2E-52 284.7 31.6 305 1-332 1-344 (344) 101 protein:vir:3780 Length: 345 # 100.0 5.3E-49 3.3E-52 285.2 30.5 323 1-334 1-345 (345) 102 protein:vir:3743 Length: 345 # 100.0 2.9E-49 1.8E-52 286.7 28.2 319 1-334 1-345 (345) 103 protein:vir:5691 Length: 344 # 100.0 1.1E-48 6.8E-52 283.5 30.2 304 1-334 1-344 (344) 104 protein:vir:2013 Length: 344 # 100.0 5.7E-48 3.5E-51 279.6 29.8 303 1-334 1-344 (344) 105 protein:vir:98853 Length: 219 100.0 8.9E-43 5.5E-46 251.1 21.7 205 129-338 1-219 (219) 106 protein:vir:5249 Length: 437 # 99.9 1E-24 6.5E-28 152.1 29.4 387 1-405 1-437 (437) 107 protein:vir:94049 Length: 532 99.9 2.1E-22 1.3E-25 139.4 28.6 393 1-406 55-516 (532) 108 protein:vir:107742 Length: 537 99.9 4.1E-22 2.6E-25 137.8 27.9 389 1-406 55-524 (537) 109 protein:vir:99563 Length: 862 99.8 1.3E-20 7.8E-24 129.7 28.4 393 1-406 101-583 (862) 110 protein:vir:103860 Length: 528 99.8 4.7E-19 2.9E-22 121.1 35.9 390 1-406 1-449 (528) 111 protein:vir:108215 Length: 469 99.8 2.9E-19 1.8E-22 122.2 34.1 396 1-406 1-458 (469) 112 protein:vir:79647 Length: 435 99.8 2.5E-20 1.5E-23 128.1 27.2 374 1-400 1-435 (435) 113 protein:vir:99232 Length: 526 99.8 5.4E-18 3.4E-21 115.2 35.7 389 1-406 1-448 (526) 114 protein:vir:79233 Length: 526 99.8 6E-18 3.7E-21 115.0 33.8 388 1-406 1-447 (526) 115 protein:vir:96068 Length: 765 99.8 1.3E-18 8.3E-22 118.6 27.8 391 1-406 44-556 (765) 116 protein:vir:104338 Length: 422 99.8 7.8E-19 4.8E-22 119.9 26.2 364 1-404 1-422 (422) 117 protein:vir:99853 Length: 488 99.8 3.5E-17 2.2E-20 110.8 34.6 372 1-406 17-411 (488) 118 protein:vir:79063 Length: 491 99.7 1.1E-16 6.7E-20 108.1 34.9 377 1-406 1-423 (491) 119 protein:vir:80040 Length: 461 99.7 2.7E-18 1.7E-21 116.9 25.2 379 1-403 1-461 (461) 120 protein:vir:107662 Length: 427 99.7 4.1E-18 2.5E-21 115.9 25.3 369 1-406 1-427 (427) 121 protein:vir:107880 Length: 491 99.7 2.9E-16 1.8E-19 105.8 34.7 377 1-406 1-423 (491) 122 protein:vir:1986 Length: 512 # 99.7 1.9E-16 1.2E-19 106.7 32.9 386 1-406 1-446 (512) 123 protein:vir:79538 Length: 502 99.7 1.6E-17 1E-20 112.7 25.4 401 1-404 1-502 (502) 124 protein:vir:98816 Length: 446 99.6 4.7E-16 2.9E-19 104.6 26.1 359 1-368 1-446 (446) 125 protein:vir:96738 Length: 505 99.6 4.5E-16 2.8E-19 104.7 24.3 396 1-405 8-505 (505) 126 protein:vir:3420 Length: 533 # 99.6 4.3E-15 2.6E-18 99.4 24.6 401 1-406 3-531 (533) 127 protein:vir:95542 Length: 548 99.5 6.7E-15 4.1E-18 98.3 22.8 404 1-406 1-518 (548) 128 protein:vir:389 Length: 530 # 99.5 8.3E-15 5.2E-18 97.8 23.0 402 1-406 1-529 (530) 129 protein:vir:77981 Length: 448 99.5 2.6E-13 1.6E-16 89.6 29.7 384 1-406 1-439 (448) 130 protein:vir:3648 Length: 695 # 99.5 5.1E-14 3.2E-17 93.4 25.6 388 1-406 67-546 (695) 131 protein:vir:79511 Length: 448 99.5 2E-13 1.3E-16 90.1 28.8 384 1-406 1-439 (448) 132 protein:vir:101541 Length: 694 99.5 6.6E-14 4.1E-17 92.8 26.2 382 1-406 91-545 (694) 133 protein:vir:106716 Length: 698 99.5 3.7E-14 2.3E-17 94.2 24.5 389 1-406 67-547 (698) 134 protein:vir:10321 Length: 495 99.5 6.5E-14 4E-17 92.9 25.8 398 1-405 1-495 (495) 135 protein:vir:78589 Length: 695 99.5 9E-14 5.6E-17 92.1 26.3 388 1-406 67-546 (695) 136 protein:vir:95254 Length: 488 99.5 4.9E-12 3E-15 82.6 33.5 400 1-405 1-488 (488) 137 protein:vir:6382 Length: 553 # 99.5 2.5E-13 1.5E-16 89.7 25.9 404 1-405 1-553 (553) 138 protein:vir:78161 Length: 355 99.5 4.1E-13 2.6E-16 88.5 27.0 296 104-406 1-334 (355) 139 protein:vir:105782 Length: 449 99.4 5E-13 3.1E-16 88.0 23.1 364 1-406 23-447 (449) 140 protein:vir:106491 Length: 646 99.3 6.1E-13 3.8E-16 87.5 20.8 399 1-406 1-500 (646) 141 protein:vir:102426 Length: 631 99.3 3.9E-13 2.4E-16 88.6 18.4 400 1-406 5-511 (631) 142 protein:vir:8654 Length: 629 # 99.2 1.9E-12 1.2E-15 84.8 18.6 398 1-406 1-516 (629) 143 protein:vir:99088 Length: 629 99.2 2.5E-12 1.6E-15 84.2 18.3 397 1-406 1-516 (629) 144 protein:vir:106027 Length: 629 99.1 4.3E-11 2.6E-14 77.4 19.4 399 1-406 1-503 (629) 145 protein:vir:107517 Length: 639 99.1 1.1E-10 7E-14 75.1 19.9 398 1-406 1-512 (639) 146 protein:vir:97900 Length: 639 99.1 1.1E-10 7E-14 75.1 19.9 398 1-406 1-512 (639) 147 protein:vir:98444 Length: 434 98.7 4E-08 2.5E-11 61.1 22.9 365 21-406 1-432 (434) 148 protein:vir:2427 Length: 485 # 98.7 1.8E-08 1.1E-11 63.0 20.8 387 1-406 6-484 (485) 149 protein:vir:7768 Length: 484 # 98.6 3.7E-08 2.3E-11 61.3 19.6 389 1-406 1-483 (484) 150 protein:vir:99072 Length: 479 98.6 2.5E-07 1.6E-10 56.7 25.3 382 1-406 9-466 (479) 151 protein:vir:104082 Length: 485 98.5 1.3E-07 8.1E-11 58.3 20.9 388 1-406 1-480 (485) 152 protein:vir:99916 Length: 504 98.5 3.6E-07 2.2E-10 55.9 22.9 394 1-406 1-490 (504) 153 protein:vir:7987 Length: 456 # 98.5 1E-07 6.3E-11 58.9 19.2 375 1-403 1-456 (456) 154 protein:vir:95113 Length: 474 98.5 4.5E-07 2.8E-10 55.4 25.8 371 1-405 7-474 (474) 155 protein:vir:4223 Length: 486 # 98.5 1.7E-07 1E-10 57.7 20.2 390 1-406 1-480 (486) 156 protein:vir:5839 Length: 533 # 98.5 1.4E-07 8.9E-11 58.1 19.7 394 1-406 4-526 (533) 157 protein:vir:4898 Length: 502 # 98.5 5.2E-07 3.2E-10 55.1 25.3 394 1-406 31-497 (502) 158 protein:vir:94101 Length: 474 98.5 5.3E-07 3.3E-10 55.0 28.6 379 1-406 4-473 (474) 159 protein:vir:105889 Length: 474 98.5 5.3E-07 3.3E-10 55.0 28.6 379 1-406 4-473 (474) 160 protein:vir:5961 Length: 503 # 98.5 5.5E-07 3.4E-10 54.9 29.3 381 1-406 27-502 (503) 161 protein:vir:2341 Length: 488 # 98.4 4.8E-07 3E-10 55.2 21.1 392 1-406 1-487 (488) 162 protein:vir:78537 Length: 480 98.4 5.4E-07 3.4E-10 54.9 21.3 387 1-406 1-469 (480) 163 protein:vir:9751 Length: 422 # 98.4 1.1E-06 6.8E-10 53.3 25.3 349 1-396 1-422 (422) 164 protein:vir:9306 Length: 511 # 98.3 1.2E-06 7.5E-10 53.0 25.4 391 1-406 27-503 (511) 165 protein:vir:99522 Length: 470 98.3 1.3E-06 8.1E-10 52.8 24.9 381 1-404 1-470 (470) 166 protein:vir:78907 Length: 518 98.3 1.3E-06 8.4E-10 52.8 24.9 381 1-397 1-518 (518) 167 protein:vir:80680 Length: 441 98.3 1.4E-06 8.7E-10 52.7 21.6 368 1-406 1-441 (441) 168 protein:vir:93747 Length: 472 98.3 1.7E-06 1E-09 52.3 25.7 375 1-406 5-470 (472) 169 protein:vir:94805 Length: 492 98.3 1.7E-06 1E-09 52.3 25.5 376 1-406 43-489 (492) 170 protein:vir:78227 Length: 480 98.3 1.1E-06 7E-10 53.2 19.9 387 1-406 1-469 (480) 171 protein:vir:94742 Length: 409 98.3 1.8E-06 1.1E-09 52.1 26.9 339 1-364 1-409 (409) 172 protein:vir:99781 Length: 511 98.3 1.9E-06 1.2E-09 52.0 24.3 395 1-406 27-510 (511) 173 protein:vir:80959 Length: 499 98.3 1.9E-06 1.2E-09 52.0 26.6 375 1-403 16-499 (499) 174 protein:vir:106639 Length: 481 98.2 2.2E-06 1.4E-09 51.6 26.5 388 1-404 6-481 (481) 175 protein:vir:102602 Length: 456 98.2 2E-06 1.2E-09 51.8 20.3 377 1-403 1-456 (456) 176 protein:vir:105819 Length: 456 98.2 2E-06 1.2E-09 51.8 20.3 377 1-403 1-456 (456) 177 protein:vir:96839 Length: 474 98.2 2.4E-06 1.5E-09 51.4 25.8 370 1-406 20-474 (474) 178 protein:vir:97336 Length: 492 98.2 3.3E-06 2E-09 50.6 25.2 372 1-406 42-491 (492) 179 protein:vir:95806 Length: 440 98.1 3.6E-06 2.2E-09 50.4 26.5 379 3-402 1-440 (440) 180 protein:vir:103951 Length: 511 98.1 3.7E-06 2.3E-09 50.3 25.3 391 1-406 27-506 (511) 181 protein:vir:105292 Length: 478 98.1 4E-06 2.5E-09 50.2 25.8 373 1-406 23-475 (478) 182 protein:vir:97171 Length: 512 98.1 4.9E-06 3.1E-09 49.7 26.0 391 1-406 31-504 (512) 183 protein:vir:96240 Length: 511 98.1 5.4E-06 3.3E-09 49.5 27.3 391 1-406 46-503 (511) 184 protein:vir:97447 Length: 474 98.1 5.8E-06 3.6E-09 49.3 26.7 376 1-406 13-470 (474) 185 protein:vir:94498 Length: 474 98.1 5.8E-06 3.6E-09 49.3 26.7 376 1-406 13-470 (474) 186 protein:vir:2500 Length: 501 # 98.1 5.9E-06 3.7E-09 49.3 20.0 375 1-406 33-495 (501) 187 protein:vir:1236 Length: 483 # 98.0 6.1E-06 3.8E-09 49.2 25.2 371 1-405 34-483 (483) 188 protein:vir:96366 Length: 511 98.0 6.1E-06 3.8E-09 49.2 25.1 391 1-406 27-503 (511) 189 protein:vir:78805 Length: 511 98.0 6.1E-06 3.8E-09 49.2 25.1 391 1-406 27-503 (511) 190 protein:vir:95899 Length: 474 98.0 6.5E-06 4E-09 49.0 24.1 377 1-406 7-473 (474) 191 protein:vir:96266 Length: 474 98.0 6.5E-06 4E-09 49.0 24.1 377 1-406 7-473 (474) 192 protein:vir:3964 Length: 453 # 98.0 6.6E-06 4.1E-09 49.0 23.0 382 1-405 1-453 (453) 193 protein:vir:9568 Length: 410 # 98.0 8.5E-06 5.3E-09 48.4 23.0 343 1-398 1-410 (410) 194 protein:vir:79043 Length: 479 97.9 1E-05 6.3E-09 48.0 29.8 374 1-406 20-479 (479) 195 protein:vir:4073 Length: 279 # 97.9 1.5E-07 9.3E-11 58.0 8.5 277 1-370 1-279 (279) 196 protein:vir:103219 Length: 201 97.9 1E-06 6.2E-10 53.5 12.9 179 204-405 1-201 (201) 197 protein:vir:96494 Length: 501 97.9 1.3E-05 8E-09 47.4 28.5 393 1-406 38-498 (501) 198 protein:vir:106571 Length: 499 97.8 1.5E-05 9.2E-09 47.1 27.3 383 1-406 1-496 (499) 199 protein:vir:38 Length: 496 # N 97.8 1.5E-05 9.3E-09 47.0 27.1 379 1-403 16-496 (496) 200 protein:vir:3609 Length: 452 # 97.8 1.7E-05 1.1E-08 46.7 21.9 377 1-406 1-451 (452) 201 protein:vir:733 Length: 453 # 97.7 2.6E-05 1.6E-08 45.7 21.4 382 1-406 1-451 (453) 202 protein:vir:4782 Length: 522 # 97.7 2.7E-05 1.7E-08 45.6 22.0 384 1-401 1-522 (522) 203 protein:vir:97376 Length: 320 97.6 3.1E-06 1.9E-09 50.8 11.7 311 1-402 1-320 (320) 204 protein:vir:2732 Length: 501 # 97.6 3.7E-05 2.3E-08 44.9 27.5 397 1-406 38-500 (501) 205 protein:vir:98883 Length: 517 97.6 3.9E-05 2.4E-08 44.7 24.1 376 1-404 1-517 (517) 206 protein:vir:1634 Length: 409 # 97.6 4.1E-05 2.6E-08 44.6 27.8 333 1-364 1-409 (409) 207 protein:vir:8184 Length: 474 # 97.5 4.9E-05 3E-08 44.2 23.1 381 1-405 17-474 (474) 208 protein:vir:9871 Length: 429 # 97.5 6.1E-05 3.8E-08 43.7 23.2 367 1-405 1-429 (429) 209 protein:vir:96179 Length: 468 97.3 9.3E-05 5.8E-08 42.7 27.0 369 1-403 14-468 (468) 210 protein:vir:78083 Length: 537 97.3 0.0001 6.3E-08 42.5 32.1 386 1-406 11-524 (537) 211 protein:vir:94546 Length: 506 97.3 0.0001 6.5E-08 42.4 24.1 386 1-406 1-501 (506) 212 protein:vir:1587 Length: 508 # 97.3 0.00012 7.2E-08 42.2 24.9 381 1-405 1-508 (508) 213 protein:vir:105461 Length: 470 97.2 0.00012 7.5E-08 42.1 25.2 368 1-403 1-470 (470) 214 protein:vir:107112 Length: 478 97.1 0.00016 9.8E-08 41.4 27.1 371 1-406 12-472 (478) 215 protein:vir:9922 Length: 489 # 96.8 0.00036 2.2E-07 39.5 25.7 388 1-406 1-485 (489) 216 protein:vir:102950 Length: 471 96.6 0.00048 3E-07 38.8 27.3 369 1-404 1-471 (471) 217 protein:vir:79703 Length: 505 96.3 0.00072 4.4E-07 37.8 27.3 375 1-398 12-505 (505) 218 protein:vir:9815 Length: 500 # 95.9 0.0013 8.3E-07 36.3 24.7 377 1-398 1-500 (500) 219 protein:vir:3028 Length: 500 # 95.9 0.0013 8.3E-07 36.3 24.7 377 1-398 1-500 (500) 220 protein:vir:94709 Length: 522 94.7 0.0037 2.3E-06 33.9 18.0 382 1-406 1-521 (522) 221 protein:vir:97265 Length: 513 93.7 0.0065 4.1E-06 32.6 23.8 383 1-406 1-513 (513) 222 protein:vir:1538 Length: 535 # 93.3 0.008 4.9E-06 32.1 15.4 384 1-406 1-519 (535) 223 protein:vir:3361 Length: 535 # 92.9 0.0096 6E-06 31.6 15.5 385 1-406 1-524 (535) 224 protein:vir:106999 Length: 564 92.7 0.01 6.3E-06 31.5 25.4 398 1-406 1-563 (564) 225 protein:vir:8883 Length: 543 # 91.7 0.015 9.2E-06 30.6 15.2 385 1-406 1-536 (543) 226 protein:vir:78393 Length: 489 90.6 0.02 1.2E-05 29.9 23.4 378 1-405 22-489 (489) 227 protein:vir:105154 Length: 525 89.9 0.024 1.5E-05 29.5 15.2 384 1-406 51-520 (525) 228 protein:vir:101189 Length: 516 88.8 0.03 1.9E-05 28.9 19.8 380 1-406 1-515 (516) 229 protein:vir:101806 Length: 516 88.8 0.03 1.9E-05 28.9 19.8 380 1-406 1-515 (516) 230 protein:vir:10447 Length: 536 87.6 0.038 2.3E-05 28.4 14.2 385 1-406 1-534 (536) 231 protein:vir:94956 Length: 452 87.0 0.042 2.6E-05 28.1 29.1 364 1-400 1-452 (452) 232 protein:vir:100598 Length: 516 86.6 0.044 2.8E-05 28.0 21.8 380 1-406 1-515 (516) 233 protein:vir:102668 Length: 547 85.4 0.053 3.3E-05 27.6 21.6 357 1-406 1-485 (547) 234 protein:vir:95149 Length: 501 85.3 0.054 3.4E-05 27.5 24.7 383 1-404 1-501 (501) 235 protein:vir:102330 Length: 451 85.2 0.054 3.4E-05 27.5 24.4 364 1-400 1-451 (451) 236 protein:vir:2198 Length: 536 # 84.3 0.061 3.8E-05 27.2 13.8 385 1-406 1-534 (536) 237 protein:vir:104892 Length: 558 83.8 0.066 4.1E-05 27.1 21.8 397 1-406 5-555 (558) 238 protein:vir:80453 Length: 535 82.6 0.076 4.7E-05 26.7 26.2 386 1-406 32-531 (535) 239 protein:vir:94572 Length: 535 82.2 0.079 4.9E-05 26.6 17.0 385 1-406 1-522 (535) 240 protein:vir:106282 Length: 521 73.6 0.17 0.0001 24.8 23.5 380 1-405 1-521 (521) 241 protein:vir:103765 Length: 549 69.4 0.22 0.00014 24.1 19.0 385 1-406 1-546 (549) 242 protein:vir:80165 Length: 651 68.8 0.23 0.00014 24.1 21.2 386 1-406 26-612 (651) 243 protein:vir:95014 Length: 491 65.9 0.28 0.00017 23.6 26.7 380 1-405 1-491 (491) 244 protein:vir:104500 Length: 537 59.9 0.38 0.00024 22.9 24.2 391 1-399 1-537 (537) 245 protein:vir:98265 Length: 524 57.5 0.43 0.00027 22.6 23.9 381 1-405 17-524 (524) 246 protein:vir:7017 Length: 515 # 55.7 0.47 0.00029 22.4 19.2 385 1-406 6-515 (515) 247 protein:vir:96783 Length: 488 50.8 0.6 0.00037 21.8 22.4 364 1-394 10-488 (488) 248 protein:vir:101418 Length: 569 50.0 0.62 0.00039 21.7 13.7 391 1-400 53-569 (569) 249 protein:vir:78696 Length: 542 48.6 0.66 0.00041 21.6 19.6 378 1-406 1-535 (542) 250 protein:vir:99672 Length: 532 46.5 0.73 0.00045 21.3 18.9 382 1-405 1-532 (532) 251 protein:vir:81017 Length: 521 44.4 0.81 0.0005 21.1 24.3 383 1-405 8-521 (521) 252 protein:vir:108049 Length: 524 42.7 0.87 0.00054 20.9 24.0 380 1-406 11-522 (524) 253 protein:vir:107404 Length: 555 42.7 0.87 0.00054 20.9 17.3 384 1-406 1-545 (555) 254 protein:vir:98506 Length: 555 42.7 0.87 0.00054 20.9 17.3 384 1-406 1-545 (555) 255 protein:vir:107822 Length: 555 42.7 0.87 0.00054 20.9 17.3 384 1-406 1-545 (555) 256 protein:vir:102239 Length: 527 41.9 0.91 0.00056 20.8 19.3 384 1-406 1-521 (527) 257 protein:vir:101494 Length: 527 41.5 0.93 0.00057 20.8 19.2 384 1-406 1-521 (527) 258 protein:vir:100039 Length: 522 41.3 0.93 0.00058 20.8 16.2 374 1-406 1-509 (522) 259 protein:vir:1785 Length: 555 # 40.6 0.96 0.0006 20.7 16.7 376 1-406 1-548 (555) 260 protein:vir:5665 Length: 511 # 40.2 0.98 0.00061 20.6 23.9 378 1-405 1-511 (511) 261 protein:vir:103177 Length: 533 37.2 1.1 0.0007 20.3 22.0 386 1-406 1-531 (533) 262 protein:vir:94599 Length: 641 34.7 1.3 0.00079 20.0 17.4 386 1-406 30-604 (641) 263 protein:vir:572 Length: 506 # 33.8 1.3 0.00083 19.9 12.9 378 1-406 34-496 (506) 264 protein:vir:6322 Length: 510 # 30.6 1.6 0.00097 19.5 13.6 365 1-405 29-510 (510) 265 protein:vir:105641 Length: 516 26.8 1.9 0.0012 19.0 17.5 377 1-406 5-516 (516) 266 protein:vir:103330 Length: 517 23.3 2.3 0.0014 18.6 18.6 377 1-405 1-517 (517) No 1 >protein:vir:9702 Length: 406 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795464;genbank:gi:28876227;genbank:GeneID:1257772 Probab=100.00 E-value=4e-108 Score=609.39 Aligned_cols=406 Identities=100% Similarity=1.401 Sum_probs=391.6 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKS 80 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~P 80 (406) ||||+++++...+.++++..++++..+..++..+||++++||+||++||++||+||+++++.+++....|++.+||+.+| T Consensus 1 m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Al~~~~V~~~i~~Ia~~iA~lp~~~~~~~g~~~~~~~~~~lL~~~P 80 (406) T protein:vir:97 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKS 80 (406) T ss_pred CccccccCCCCCCcchHHHHHhcCCCCcccccchhhccHHHHHHHHHHHHhhhhCeeEEEecCccccccchHHHHhhccC Confidence 99999999999999999999998888888999999999999999999999999999999999999889999999999999 Q ss_pred cccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeEee Q lcl|Aclame:pro 81 TSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHW 160 (406) Q Consensus 81 n~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~ 160 (406) |++||+++||+.++.+++++||+|++++|+..+|++.+|+|++|+.|++..++++.++|.+....++..+.+++++|||| T Consensus 81 N~~~t~~~f~~~~~~~l~l~Gnay~~i~r~~~~g~~~~L~~i~p~~v~v~~~~~~~~~y~~~~~~~~~~~~~~~~evih~ 160 (406) T protein:vir:97 81 TSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHW 160 (406) T ss_pred CCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCCCeEEEEEEECCCeeEEEEcCCceEEEEEEecCCceEEEEccccEEEe Confidence 99999999999999999999999999999888899999999999999999998899999888888899999999999999 Q ss_pred ccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccC Q lcl|Aclame:pro 161 KFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDS 240 (406) Q Consensus 161 r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~ 240 (406) |+++.++++|+||+.++..+|..+.++.++..++|+||++|++++..+..+++++.++++++|++.++|.++|+++||++ T Consensus 161 r~~~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~~i~~~~~~l~~e~~~~~~~~~~~~~~g~n~g~~~vl~~ 240 (406) T protein:vir:97 161 KFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDS 240 (406) T ss_pred cCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEecCCCCCHHHHHHHHHHHHHHhcccccCceeecCC Confidence 99988999999999999999999999999999999999999999999999999999999999999999989999999999 Q ss_pred CceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccch Q lcl|Aclame:pro 241 TMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDR 320 (406) Q Consensus 241 g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~ 320 (406) |++|+++++++.|+||+|++++++++||++|||||.+||..++++|++++.+.|++.||.||+++||++|+++|++..++ T Consensus 241 g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~~~~~~~~e~~~~~f~~~~l~P~~~~ie~~l~~kll~~~~~ 320 (406) T protein:vir:97 241 TMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDR 320 (406) T ss_pred CceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhcChhhc Confidence 99999999999999999999999999999999999999998899999999999999999999999999999999998887 Q ss_pred hhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccC Q lcl|Aclame:pro 321 RLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVN 400 (406) Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~ 400 (406) ..++++|+++++++.+++++.+++++|++|+||+|+++|+||+++|+||++++|+|++|++...++++..+...+|||+| T Consensus 321 ~~~~i~fd~~~~~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p~~~~~gD~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~ 400 (406) T protein:vir:97 321 RLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVN 400 (406) T ss_pred cceeEEEecCccchhhHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeEeeccCccchhcccccccccccccCCCCCC Confidence 78889999999999999999999999999999999999999999999999999999999999999999888899999999 Q ss_pred CCCCCC Q lcl|Aclame:pro 401 AEEDKS 406 (406) Q Consensus 401 ~~~~~~ 406 (406) +++|+| T Consensus 401 ~~~~~~ 406 (406) T protein:vir:97 401 AEEDKS 406 (406) T ss_pred CCCCCC Confidence 999999 No 2 >protein:vir:3868 Length: 417 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680485;swissprot:trembl:q8ltc2;genbank:gi:22296525;interpro:IPR006427;interpro:IPR006944;uniprot:Q8LTC2;genbank:GeneID:951699 Probab=100.00 E-value=1.7e-101 Score=573.02 Aligned_cols=406 Identities=53% Similarity=0.858 Sum_probs=365.5 Q ss_pred CcccccccCCCCc-chhhHH-HhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc-ccccchHHHHhh Q lcl|Aclame:pro 1 MSFFQPLGTSKVS-YDDYIS-SVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD-IIHDEDINYLLN 77 (406) Q Consensus 1 M~~f~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~-~~~~~~~~~lL~ 77 (406) |+||+.+.....+ +...+. .....+....++..+||++++||+||++||++||++|+++++.+++ ....|++.++|+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Al~~~~V~~cv~~ia~~iA~lp~~~~~~~~~~~~~~~~~~~lL~ 80 (417) T protein:vir:38 1 MKLFRGLATEVDPHWADHLLDSGVIPSFRGGYLGISALRNSDVLTAVSIVSGDVSRFPLVITDSSTDEVIDLANIEYLMN 80 (417) T ss_pred CccccccccCCCccchhhhcccccccccCCceechhhcccHHHHHHHHHHHHhhccCeeEEEEcCCcceeccchHHHHHh Confidence 9999876554333 222111 1111122223455689999999999999999999999999987654 345678999999 Q ss_pred hhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcceee Q lcl|Aclame:pro 78 VKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDV 157 (406) Q Consensus 78 ~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~v 157 (406) .+|||+||+++||+.++.+++++||+|++++|+..+|.|..++|++|+.|.+..+..+.++|.+.....+....+++++| T Consensus 81 ~~PN~~~t~~~f~~~~~~~lll~Gn~y~~i~r~~~g~~~~~l~~l~p~~v~v~~~~~~~~~y~~~~~~~~~~~~~~~~dv 160 (417) T protein:vir:38 81 TKVNKRLSAYQWKFPMMVNAILTGNAYSRIVRDPITNEPAMFEFYAPSQTQVDTSDPDNIIYRFTPYNSSMQKVCGFEDV 160 (417) T ss_pred cccCcCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCEEEEEEEeCCceEEEEEcCCCeEEEEEEEcCCcEEEEecCcce Confidence 99999999999999999999999999999999988899999999999999999888899988888777777888999999 Q ss_pred EeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceee Q lcl|Aclame:pro 158 IHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLV 237 (406) Q Consensus 158 ih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~v 237 (406) ||||+++.++++|+||+.++.++|..+.++.++..++|+||++|++++..++.+++++.++++++|++.++|.|+|++++ T Consensus 161 iH~r~~~~d~~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~l~~e~~~~~~~~~~~~~~g~n~g~~~v 240 (417) T protein:vir:38 161 IHWKFFSYDTIMGRSPLLSLGDEIGLQESGVSTLQKFFKSGLKGSIIKAKESRLSAEARQKIREDFERAQAGADAGSPII 240 (417) T ss_pred EEecCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHHHHHHhcccccCCcee Confidence 99999888999999999999999999999999999999999999999999999999999999999999999989999999 Q ss_pred ccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 238 FDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLND 317 (406) Q Consensus 238 l~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~ 317 (406) +++|++|++++++++|+||+|++++++++||++|||||++||..++++|++++.+.|+++||.|++++||++|+++|+++ T Consensus 241 l~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~s~~e~~~~~~~~~tl~P~~~~ie~~l~~~Ll~~ 320 (417) T protein:vir:38 241 VDATMDYQPLEVDTNVLNLINSNNYSTAQIAKALRVPAYRLAQNSPNQSVKQLADDYIRNDLPFYFEPITSEFELKLLDD 320 (417) T ss_pred ccCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCh Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999998 Q ss_pred cchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCC Q lcl|Aclame:pro 318 KDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGG 397 (406) Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg 397 (406) .++..++++||+........+.+++++++|++|+||+|+++|+||++++++|++++|+|++|++...+.+.+.....||| T Consensus 321 ~~~~~~~~~fd~~~l~~~~~~~~~~~~~~G~~T~NE~R~~~gl~pi~~g~~d~~~~~~n~~~~d~~~~~~~~~~~~~kgg 400 (417) T protein:vir:38 321 AQRHQYCIGFDTKSVNGLPIADVNTAVNGGLWTGNEGRAELGKKPLKDPNMDRIQSTLNTVFLDQKEAYQAEHAAELKGG 400 (417) T ss_pred hhcccceEEechhhhhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeecccccccccccccccccccccCCC Confidence 88777889999877777777788999999999999999999999999989999999999999999988888888888999 Q ss_pred ccCCCCCCC Q lcl|Aclame:pro 398 EVNAEEDKS 406 (406) Q Consensus 398 ~~~~~~~~~ 406 (406) ++++++++| T Consensus 401 ~~~~~~~~~ 409 (417) T protein:vir:38 401 DTNAKGNQN 409 (417) T ss_pred CCCCCCCCc Confidence 988887766 No 3 >protein:vir:100249 Length: 431 # NCBI annotation: gp78 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355414;genbank:gi:77864704;genbank:GeneID:3725971 Probab=100.00 E-value=2.1e-95 Score=539.66 Aligned_cols=387 Identities=19% Similarity=0.249 Sum_probs=338.9 Q ss_pred CcccccccCCCCc-----------------------------chhhHHHhhcCC--cccccchhhhhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MSFFQPLGTSKVS-----------------------------YDDYISSVLAGD--VSQKYLGVSALKNSDILTATSIIA 49 (406) Q Consensus 1 M~~f~~~~~~~~~-----------------------------~~~~~~~~~~~~--~~~~~~~~~a~~~~~v~~~i~~ia 49 (406) ||+|+++..++.+ .+.++..++.+. .+..++..+||++++||+||++|| T Consensus 1 Mgl~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~V~~ci~~Ia 80 (431) T protein:vir:10 1 MGLFDFIRREKQPEAQARPHVEPSFQASTPTTSIPGETFEGLDDPRLKEYIRRGELNGGTGRETRALRNMAVLRCVTLIS 80 (431) T ss_pred CcchhhhhcCcccccccccccccccccccccccccccccccccchHHHHhhccCccCcceechhhhhccHHHHHHHHHHH Confidence 9988765321110 012233444333 245688899999999999999999 Q ss_pred HhhccceeEEEecC--CcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeE Q lcl|Aclame:pro 50 GDIARFPLVKKDVN--GDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSET 127 (406) Q Consensus 50 ~~ia~~~~~~~~~~--~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~ 127 (406) ++||++|+++|+.+ ++....|++.++|+.+||++||+++||+.++.+++++||+|++++++ +|++++|+|++|..+ T Consensus 81 ~~iA~lp~~v~~~~~~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~--~g~~~~L~pl~~~~v 158 (431) T protein:vir:10 81 GTIGMLPMNLISSDDSKQVLTDDPAHRLLKYKPNDWQTPMEFKSLMQLRALLDGESMARIVWS--GNRPIRLIPMDRGSA 158 (431) T ss_pred HhhccCceEEEEecCceeeeccchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEc--CCceEEEEEEcCcee Confidence 99999999998864 34567799999999999999999999999999999999999999997 388999999999999 Q ss_pred EEEEccCcceEEEEEeecCCeEEEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEee Q lcl|Aclame:pro 128 TVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMK 207 (406) Q Consensus 128 ~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~ 207 (406) ++..+.+|.++|.+. ..+|..+.|++++|+|||+++.++++|+||+..+..+|..+.+++++..++|+||++|+++++. T Consensus 159 ~~~~~~~~~~~y~~~-~~~g~~~~~~~~dViHir~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~ 237 (431) T protein:vir:10 159 KGRLTSTWQIVYDYT-TPTGDKIELPAREVFHLRDLSIDGVSGVSRVKLSGNALELAEQAERAASRTFRTGVMAGGAIEV 237 (431) T ss_pred EEEEcCCCeEEEEEE-eCCceEEEEchhhEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEec Confidence 999888888877655 4577888999999999999888999999999999999999999999999999999999999999 Q ss_pred cCCCCHHHHHHHHHHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccc Q lcl|Aclame:pro 208 GAQLSGDARQRARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPN 284 (406) Q Consensus 208 ~~~~~~e~~~~~~~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~ 284 (406) ++.+++|+.++++++|++.++| .|+|+++++++|++|++++++++|+||+|++++++++||++|||||++||. .+++ T Consensus 238 ~~~ls~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~r~~~~~~Ia~~fgVPp~~lg~~~~~t~ 317 (431) T protein:vir:10 238 PKELSDNAYGRMKASVQENHTGSENAGSWMLLEEGATAKQFSNTAASAQQIENRNHQIEEVARMYGVPRPLLMMDDTSWG 317 (431) T ss_pred CCCCCHHHHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCCCCCcc Confidence 9999999999999999999988 688999999999999999999999999999999999999999999999996 4578 Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCC----CcCHHHHHH Q lcl|Aclame:pro 285 QSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQ----ILTPNQGLV 356 (406) Q Consensus 285 ~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g----~~t~NE~R~ 356 (406) +|+|++.+.|+++||.||+++||++||++|++..++..++++|++ +.|.+++++.+.+++..| +||+||+|+ T Consensus 318 sn~eq~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~~g~lT~NE~R~ 397 (431) T protein:vir:10 318 SGIEQLAIFFIQYGLSHWFVSWEQAAARAFLPEKMLGQRQFKFNEGALLRGTLNDQAAFFSKALGAGGQSPWMKQNEVRE 397 (431) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhcCCceEEEechhhhccCHHHHHHHHHHHHhcccccCccCHHHHHH Confidence 999999999999999999999999999999998777677888875 456788999998888654 599999999 Q ss_pred HhCCCCCCCCCCCeeeeccCccchhhcccccccc Q lcl|Aclame:pro 357 ELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKV 390 (406) Q Consensus 357 ~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~ 390 (406) ++|+||+++|+||++++|.|+.+.+..++.+... T Consensus 398 ~~gl~p~~~~~gD~~~~p~n~~~~~~~~~~p~~~ 431 (431) T protein:vir:10 398 MLDLPRADDPVADQLRNPMTQKQKGSGDEPPATT 431 (431) T ss_pred HhCCCCCCCccccceecccccccCCCCCCCCCCC Confidence 9999999999999999999998776544322221 No 4 >protein:vir:98396 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1581 # MgeName: phiPVL(108) # Cross-refs: genbank:acc:YP_918929;genbank:gi:119443691;genbank:GeneID:4594558 Probab=100.00 E-value=3.9e-95 Score=538.15 Aligned_cols=396 Identities=27% Similarity=0.376 Sum_probs=340.8 Q ss_pred CcccccccCCCCc-----chhhHHHh--hcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHH Q lcl|Aclame:pro 1 MSFFQPLGTSKVS-----YDDYISSV--LAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDIN 73 (406) Q Consensus 1 M~~f~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~ 73 (406) ||+|++..++... ...++..+ ..+.....+++.+||++++||+||++||++||++|+++++. ++....|+++ T Consensus 26 ~~~f~~~e~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~acv~~Ia~~iA~lpl~~~~~-~~~~~~~~~~ 104 (441) T protein:vir:98 26 VGIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVN-GQINYSDRIV 104 (441) T ss_pred cccccccccccccCCCcchHHHHHHhhcccccCccccchhhhhccHHHHHHHHHHHHhhccCceEEecC-CcccccchHH Confidence 7777654433211 11222222 22334556899999999999999999999999999999974 4566788999 Q ss_pred HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEee---cCCeEE Q lcl|Aclame:pro 74 YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDM---LTAKQV 150 (406) Q Consensus 74 ~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~---~~g~~~ 150 (406) ++|+.+||++||+++||+.++.+++++||+|++++|+ ..|+|++|+|++|+.|++..+.+|.+.|++... ..+..+ T Consensus 105 ~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~-~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~ 183 (441) T protein:vir:98 105 NLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRD-KTGEPMNLTFRKTSEIELKLDARGRLYYFHQRIDSNGNNIER 183 (441) T ss_pred HHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEEc-CCCcEEEEEEEcCceeEEEECCCCcEEEEEEEeccCcceeeE Confidence 9999999999999999999999999999999999998 458999999999999999999999887766542 344567 Q ss_pred EEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCC-HHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 151 KCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLS-GDARQRARQEFEKMREG 229 (406) Q Consensus 151 ~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~g 229 (406) .+++++|||+|+++.++++|+||+.++..+|..+.++.++..++|+||+.|+++++.++.++ +++++++++.|++.++| T Consensus 184 ~~~~~dviHir~~~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~~~~~~e~~~~~~~~~~~~~~G 263 (441) T protein:vir:98 184 NVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSG 263 (441) T ss_pred EEccccEEEeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHHHHHHHHHhcC Confidence 89999999999999999999999999999999999999999999999999999999988874 77889999999999988 Q ss_pred -cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 -SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITS 308 (406) Q Consensus 230 -~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~ 308 (406) .++|++++|++|++|++++.+++|+||+|++++++++||++|||||.+||....+.+.+++...|. +||.||+++||+ T Consensus 264 ~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~~~~s~~q~~~~y~-~tl~P~~~~ie~ 342 (441) T protein:vir:98 264 TKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETANMSITDANLDYL-STLKPYITCVCA 342 (441) T ss_pred ccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCCCCccHHHHHHHHH-HHHHHHHHHHHH Confidence 678999999999999999999999999999999999999999999999997666666677766665 699999999999 Q ss_pred HHHhhccCccchhhhhhhhc----ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcc Q lcl|Aclame:pro 309 ELGLKTLNDKDRRLYHIEFD----TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE 384 (406) Q Consensus 309 ~l~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~ 384 (406) +|+++|++..++ ++++|+ ++.|.+++++.+..++++|++|+||+|+++|+||+++++++.+++|+|++|++..+ T Consensus 343 ~ln~~L~~~~~~--~~~~fd~~~llr~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~pi~gGd~~~~~~~~n~~~~~~~~ 420 (441) T protein:vir:98 343 ELNFKFNDEYVN--REFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHVNIELVD 420 (441) T ss_pred HHHhhccccccC--ceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeeccccccccccc Confidence 999999876543 456676 45678899999999999999999999999999999887777999999999999888 Q ss_pred ccccccC----cccCCCccCC Q lcl|Aclame:pro 385 EYQDKVG----IKGKGGEVNA 401 (406) Q Consensus 385 ~~~~~~~----~~~~gg~~~~ 401 (406) +++.+.. ...||||+|+ T Consensus 421 ~~q~~~~~~~~~~~kgGe~ne 441 (441) T protein:vir:98 421 EYQMNKSRATDKKLKGGEENE 441 (441) T ss_pred ccccccccccccccCCCCCCC Confidence 7665553 3468888777 No 5 >protein:vir:4598 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:101 # MgeName: PVL # Cross-refs: genbank:acc:NP_058443;genbank:gi:9635169;genbank:GeneID:1262702 Probab=100.00 E-value=5.7e-95 Score=537.26 Aligned_cols=396 Identities=27% Similarity=0.368 Sum_probs=341.2 Q ss_pred CcccccccCCCCc-----chhhHHHhhc--CCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHH Q lcl|Aclame:pro 1 MSFFQPLGTSKVS-----YDDYISSVLA--GDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDIN 73 (406) Q Consensus 1 M~~f~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~ 73 (406) ||||+++.++... ...++..+.+ +..+..++...||++++||+||++||+++|++||++++. ++....|+++ T Consensus 1 Mg~f~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~v~~cv~~Ia~~iA~~p~~~~~~-~~~~~~~~~~ 79 (416) T protein:vir:45 1 MGIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVN-GQINYSDRIV 79 (416) T ss_pred CCcccccccccccCCCcchhHHHHHhccccccCccccchhhhhcchHHHHHHHHHHHhhccCceEEecC-ccccccchHH Confidence 9999876554322 1222322222 334567888999999999999999999999999999864 4566778999 Q ss_pred HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEee---cCCeEE Q lcl|Aclame:pro 74 YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDM---LTAKQV 150 (406) Q Consensus 74 ~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~---~~g~~~ 150 (406) ++|+.+||++||+++||+.++.+++++||+|++++++ ..|+|++|+|++|+.|++..+.+|.+.|.+... ..+..+ T Consensus 80 ~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~-~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~ 158 (416) T protein:vir:45 80 NLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRD-KTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGNNIER 158 (416) T ss_pred HHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEEcCceeEEEECCCccEEEEEEEecCCCceeEE Confidence 9999999999999999999999999999999999998 458999999999999999999889887665532 234557 Q ss_pred EEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCC-CHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 151 KCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQL-SGDARQRARQEFEKMREG 229 (406) Q Consensus 151 ~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~g 229 (406) .+++++|||||+++.++++|+||+.++..+|+.+.++.++..++|+||+.|+++++.++.. ++++++++++.|++.++| T Consensus 159 ~~~~~evihir~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~~~~~~~~~~g 238 (416) T protein:vir:45 159 NVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSG 238 (416) T ss_pred EEccccEEEeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHHHHHHHHHhcC Confidence 8999999999999989999999999999999999999999999999999999999998876 467889999999999988 Q ss_pred -cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 -SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITS 308 (406) Q Consensus 230 -~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~ 308 (406) .++|++++|++|++|++++.+++|+||+|.+++++++||++|||||.+||....+.+.+++... +..||.|++++||+ T Consensus 239 ~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~~~~~-~~~~l~P~~~~ie~ 317 (416) T protein:vir:45 239 TKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETANMSITDANLD-YLSTLKPYITCVCA 317 (416) T ss_pred ccccCceeecCCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCccHHHHHHH-HHHHHHHHHHHHHH Confidence 6789999999999999999999999999999999999999999999999976555555555554 55699999999999 Q ss_pred HHHhhccCccchhhhhhhhc----ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcc Q lcl|Aclame:pro 309 ELGLKTLNDKDRRLYHIEFD----TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE 384 (406) Q Consensus 309 ~l~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~ 384 (406) +|+++|++..++ ++++|+ ++.|.+++++.+.+++++|++|+||+|+++|+||+++++++++++++|++|++..+ T Consensus 318 ~ln~~l~~~~~~--~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~~gd~~~~~~~~n~~~~~~~~ 395 (416) T protein:vir:45 318 ELNFKFNDEYVN--REFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHVNIELVD 395 (416) T ss_pred HHhhhccccccC--ceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeeccccccccccc Confidence 999999876543 455665 45678899999999999999999999999999999988888999999999999888 Q ss_pred ccccccCc----ccCCCccCC Q lcl|Aclame:pro 385 EYQDKVGI----KGKGGEVNA 401 (406) Q Consensus 385 ~~~~~~~~----~~~gg~~~~ 401 (406) +++...+. +.||||+|+ T Consensus 396 ~~~~~~~~~~~~~~kgGe~n~ 416 (416) T protein:vir:45 396 EYQMNKSRATDKKLKGGEENE 416 (416) T ss_pred ccCcccccccccccCCCCCCC Confidence 76655443 568899877 No 6 >protein:vir:81095 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1891 # MgeName: tp310-1 # Cross-refs: genbank:acc:YP_001429872;genbank:gi:156603925;genbank:GeneID:5525315 Probab=100.00 E-value=5.7e-95 Score=537.26 Aligned_cols=396 Identities=27% Similarity=0.368 Sum_probs=341.2 Q ss_pred CcccccccCCCCc-----chhhHHHhhc--CCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHH Q lcl|Aclame:pro 1 MSFFQPLGTSKVS-----YDDYISSVLA--GDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDIN 73 (406) Q Consensus 1 M~~f~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~ 73 (406) ||||+++.++... ...++..+.+ +..+..++...||++++||+||++||+++|++||++++. ++....|+++ T Consensus 1 Mg~f~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~v~~cv~~Ia~~iA~~p~~~~~~-~~~~~~~~~~ 79 (416) T protein:vir:81 1 MGIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVN-GQINYSDRIV 79 (416) T ss_pred CCcccccccccccCCCcchhHHHHHhccccccCccccchhhhhcchHHHHHHHHHHHhhccCceEEecC-ccccccchHH Confidence 9999876554322 1222322222 334567888999999999999999999999999999864 4566778999 Q ss_pred HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEee---cCCeEE Q lcl|Aclame:pro 74 YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDM---LTAKQV 150 (406) Q Consensus 74 ~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~---~~g~~~ 150 (406) ++|+.+||++||+++||+.++.+++++||+|++++++ ..|+|++|+|++|+.|++..+.+|.+.|.+... ..+..+ T Consensus 80 ~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~-~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~ 158 (416) T protein:vir:81 80 NLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRD-KTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGNNIER 158 (416) T ss_pred HHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEEcCceeEEEECCCccEEEEEEEecCCCceeEE Confidence 9999999999999999999999999999999999998 458999999999999999999889887665532 234557 Q ss_pred EEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCC-CHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 151 KCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQL-SGDARQRARQEFEKMREG 229 (406) Q Consensus 151 ~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~g 229 (406) .+++++|||||+++.++++|+||+.++..+|+.+.++.++..++|+||+.|+++++.++.. ++++++++++.|++.++| T Consensus 159 ~~~~~evihir~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~~~~~~~~~~g 238 (416) T protein:vir:81 159 NVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSG 238 (416) T ss_pred EEccccEEEeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHHHHHHHHHhcC Confidence 8999999999999989999999999999999999999999999999999999999998876 467889999999999988 Q ss_pred -cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 -SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITS 308 (406) Q Consensus 230 -~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~ 308 (406) .++|++++|++|++|++++.+++|+||+|.+++++++||++|||||.+||....+.+.+++... +..||.|++++||+ T Consensus 239 ~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~~~~~-~~~~l~P~~~~ie~ 317 (416) T protein:vir:81 239 TKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETANMSITDANLD-YLSTLKPYITCVCA 317 (416) T ss_pred ccccCceeecCCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCccHHHHHHH-HHHHHHHHHHHHHH Confidence 6789999999999999999999999999999999999999999999999976555555555554 55699999999999 Q ss_pred HHHhhccCccchhhhhhhhc----ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcc Q lcl|Aclame:pro 309 ELGLKTLNDKDRRLYHIEFD----TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE 384 (406) Q Consensus 309 ~l~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~ 384 (406) +|+++|++..++ ++++|+ ++.|.+++++.+.+++++|++|+||+|+++|+||+++++++++++++|++|++..+ T Consensus 318 ~ln~~l~~~~~~--~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~~gd~~~~~~~~n~~~~~~~~ 395 (416) T protein:vir:81 318 ELNFKFNDEYVN--REFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHVNIELVD 395 (416) T ss_pred HHhhhccccccC--ceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeeccccccccccc Confidence 999999876543 455665 45678899999999999999999999999999999988888999999999999888 Q ss_pred ccccccCc----ccCCCccCC Q lcl|Aclame:pro 385 EYQDKVGI----KGKGGEVNA 401 (406) Q Consensus 385 ~~~~~~~~----~~~gg~~~~ 401 (406) +++...+. +.||||+|+ T Consensus 396 ~~~~~~~~~~~~~~kgGe~n~ 416 (416) T protein:vir:81 396 EYQMNKSRATDKKLKGGEENE 416 (416) T ss_pred ccCcccccccccccCCCCCCC Confidence 76655443 568899877 No 7 >protein:vir:79984 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1875 # MgeName: tp310-3 # Cross-refs: genbank:acc:YP_001430000;genbank:gi:156604055;genbank:GeneID:5525444 Probab=100.00 E-value=9.4e-95 Score=536.08 Aligned_cols=396 Identities=27% Similarity=0.372 Sum_probs=337.7 Q ss_pred CcccccccCCCC-----cchhhHHHhhc--CCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHH Q lcl|Aclame:pro 1 MSFFQPLGTSKV-----SYDDYISSVLA--GDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDIN 73 (406) Q Consensus 1 M~~f~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~ 73 (406) ||+|++..++.. ....++..+.+ +.....+++..||++++||+||++||++||+||+++++. ++....|+++ T Consensus 26 ~~lf~~~e~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~~cv~~Ia~~iA~lp~~~~~~-~~~~~~~~~~ 104 (441) T protein:vir:79 26 VGIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVN-GQINYSDRIV 104 (441) T ss_pred cccccccccccccCCCcchHHHHHHhcccCcccccccchhhhhccHHHHHHHHHHHHhhccCceeeecC-ccccccchHH Confidence 666655433321 11122222222 233456888999999999999999999999999999864 4566788999 Q ss_pred HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEee---cCCeEE Q lcl|Aclame:pro 74 YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDM---LTAKQV 150 (406) Q Consensus 74 ~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~---~~g~~~ 150 (406) ++|+.+||++||+++||+.++.+++++||+|++++|+ ..|+|++|+|++|+.|++..+.+|.+.|.+... ..+..+ T Consensus 105 ~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~G~~~~L~~i~~~~v~v~~d~~g~~~~~~~~~~~~~~~~~~ 183 (441) T protein:vir:79 105 NLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRD-KTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGNNIER 183 (441) T ss_pred HHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEEcCceeEEEECCCccEEEEEEEeccCCceeEE Confidence 9999999999999999999999999999999999998 458999999999999999999889887665532 334567 Q ss_pred EEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCC-CHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 151 KCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQL-SGDARQRARQEFEKMREG 229 (406) Q Consensus 151 ~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~g 229 (406) .+++++|||+|+++.++++|+||+.++..+|..+.++.++..++|+||+.|++++..++.+ ++++++++++.|++.++| T Consensus 184 ~~~~~dvih~k~~~~dg~~G~spl~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~e~~e~~r~~~~~~~~G 263 (441) T protein:vir:79 184 NVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSG 263 (441) T ss_pred EEccccEEEeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCCHHHHHHHHHHHHHHhcC Confidence 8999999999999999999999999999999999999999999999999999999998887 578889999999999998 Q ss_pred -cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 -SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITS 308 (406) Q Consensus 230 -~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~ 308 (406) .|+|+++||++|++|++++.+++|+||+|++++++++||++|||||.+||....+.+.+++...| ..||.|++++||+ T Consensus 264 ~~nag~~~vl~~G~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~s~~q~~~~~-~~tl~P~~~~ie~ 342 (441) T protein:vir:79 264 TKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETANMSITDANLDY-LSTLKPYITCVCA 342 (441) T ss_pred ccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCCCCccHHHHHHHH-HHHHHHHHHHHHH Confidence 67899999999999999999999999999999999999999999999999765555666665555 5699999999999 Q ss_pred HHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcc Q lcl|Aclame:pro 309 ELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE 384 (406) Q Consensus 309 ~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~ 384 (406) +|+++|++... .++++|++ +.|.+++++.+..++++|++|+||+|+++|+||+++++++.+++++|++|++..+ T Consensus 343 eln~kl~~~~~--~~~~~fd~~~llr~D~~~~~~~~~~~i~~G~~T~NE~R~~~gl~Pi~ggd~~~~~~~~n~~~~~~~~ 420 (441) T protein:vir:79 343 ELNFKFNDEYV--NREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHVNIELVD 420 (441) T ss_pred HHhhhcccccc--CceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeeccccccccccc Confidence 99999987554 34566764 5678899999999999999999999999999999887777899999999999887 Q ss_pred cccccc----CcccCCCccCC Q lcl|Aclame:pro 385 EYQDKV----GIKGKGGEVNA 401 (406) Q Consensus 385 ~~~~~~----~~~~~gg~~~~ 401 (406) +++.+. ....||||+|+ T Consensus 421 ~~~~~~~~~~~~~~kgGe~~e 441 (441) T protein:vir:79 421 EYQMNKSRATDKKLKGGEENE 441 (441) T ss_pred ccccccccccccccCCCCCCC Confidence 766554 34567888777 No 8 >protein:vir:9408 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:167 # MgeName: phi 13 # Cross-refs: genbank:acc:NP_803386;genbank:gi:29028698;genbank:GeneID:1258164 Probab=100.00 E-value=9.4e-95 Score=536.08 Aligned_cols=396 Identities=27% Similarity=0.372 Sum_probs=337.7 Q ss_pred CcccccccCCCC-----cchhhHHHhhc--CCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHH Q lcl|Aclame:pro 1 MSFFQPLGTSKV-----SYDDYISSVLA--GDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDIN 73 (406) Q Consensus 1 M~~f~~~~~~~~-----~~~~~~~~~~~--~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~ 73 (406) ||+|++..++.. ....++..+.+ +.....+++..||++++||+||++||++||+||+++++. ++....|+++ T Consensus 26 ~~lf~~~e~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~~cv~~Ia~~iA~lp~~~~~~-~~~~~~~~~~ 104 (441) T protein:vir:94 26 VGIFYKNEKRDLQYNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVN-GQINYSDRIV 104 (441) T ss_pred cccccccccccccCCCcchHHHHHHhcccCcccccccchhhhhccHHHHHHHHHHHHhhccCceeeecC-ccccccchHH Confidence 666655433321 11122222222 233456888999999999999999999999999999864 4566788999 Q ss_pred HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEee---cCCeEE Q lcl|Aclame:pro 74 YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDM---LTAKQV 150 (406) Q Consensus 74 ~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~---~~g~~~ 150 (406) ++|+.+||++||+++||+.++.+++++||+|++++|+ ..|+|++|+|++|+.|++..+.+|.+.|.+... ..+..+ T Consensus 105 ~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~G~~~~L~~i~~~~v~v~~d~~g~~~~~~~~~~~~~~~~~~ 183 (441) T protein:vir:94 105 NLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRD-KTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGNNIER 183 (441) T ss_pred HHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEEcCceeEEEECCCccEEEEEEEeccCCceeEE Confidence 9999999999999999999999999999999999998 458999999999999999999889887665532 334567 Q ss_pred EEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCC-CHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 151 KCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQL-SGDARQRARQEFEKMREG 229 (406) Q Consensus 151 ~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~g 229 (406) .+++++|||+|+++.++++|+||+.++..+|..+.++.++..++|+||+.|++++..++.+ ++++++++++.|++.++| T Consensus 184 ~~~~~dvih~k~~~~dg~~G~spl~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~e~~e~~r~~~~~~~~G 263 (441) T protein:vir:94 184 NVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFHKSFSG 263 (441) T ss_pred EEccccEEEeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCCHHHHHHHHHHHHHHhcC Confidence 8999999999999999999999999999999999999999999999999999999998887 578889999999999998 Q ss_pred -cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 -SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITS 308 (406) Q Consensus 230 -~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~ 308 (406) .|+|+++||++|++|++++.+++|+||+|++++++++||++|||||.+||....+.+.+++...| ..||.|++++||+ T Consensus 264 ~~nag~~~vl~~G~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~s~~q~~~~~-~~tl~P~~~~ie~ 342 (441) T protein:vir:94 264 TKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETANMSITDANLDY-LSTLKPYITCVCA 342 (441) T ss_pred ccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCCCCccHHHHHHHH-HHHHHHHHHHHHH Confidence 67899999999999999999999999999999999999999999999999765555666665555 5699999999999 Q ss_pred HHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcc Q lcl|Aclame:pro 309 ELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE 384 (406) Q Consensus 309 ~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~ 384 (406) +|+++|++... .++++|++ +.|.+++++.+..++++|++|+||+|+++|+||+++++++.+++++|++|++..+ T Consensus 343 eln~kl~~~~~--~~~~~fd~~~llr~D~~~~~~~~~~~i~~G~~T~NE~R~~~gl~Pi~ggd~~~~~~~~n~~~~~~~~ 420 (441) T protein:vir:94 343 ELNFKFNDEYV--NREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHVNIELVD 420 (441) T ss_pred HHhhhcccccc--CceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeeccccccccccc Confidence 99999987554 34566764 5678899999999999999999999999999999887777899999999999887 Q ss_pred cccccc----CcccCCCccCC Q lcl|Aclame:pro 385 EYQDKV----GIKGKGGEVNA 401 (406) Q Consensus 385 ~~~~~~----~~~~~gg~~~~ 401 (406) +++.+. ....||||+|+ T Consensus 421 ~~~~~~~~~~~~~~kgGe~~e 441 (441) T protein:vir:94 421 EYQMNKSRATDKKLKGGEENE 441 (441) T ss_pred ccccccccccccccCCCCCCC Confidence 766554 34567888777 No 9 >protein:vir:1380 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612832;genbank:gi:20065966;genbank:GeneID:935782 Probab=100.00 E-value=1.6e-94 Score=534.73 Aligned_cols=392 Identities=19% Similarity=0.244 Sum_probs=342.7 Q ss_pred CcccccccCCCCc----------------chhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC Q lcl|Aclame:pro 1 MSFFQPLGTSKVS----------------YDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG 64 (406) Q Consensus 1 M~~f~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 64 (406) ||||+++.+++.+ .+..+...++...+..++...||++++||+||++||++||++|+++++.+ T Consensus 1 MG~f~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~al~~~~v~~ci~~ia~~iA~lp~~~~~~~- 79 (422) T protein:vir:13 1 MGFLRGLFNKKNNNDEKRSNYDEDIGIDISDSNFWEKFGIKLNFSVRGKRALKENTVYVCTKIRAESIGKLSLKIYKDK- 79 (422) T ss_pred CchhhhhhhccCCccchhhhhhhccccccCcchhhhhccccCCcccchhhhhccHHHHHHHHHHHHhhhhCceEEEecC- Confidence 9999864332111 11223344444556678999999999999999999999999999999854 Q ss_pred cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcce-----EE Q lcl|Aclame:pro 65 DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI-----VY 139 (406) Q Consensus 65 ~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~-----~~ 139 (406) +....|++.++|+.+||++||+++||+.++.+++++||+|++++++. .|+|++|+|++|+.|++..+.+|.. .+ T Consensus 80 ~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~-~G~~~~L~~i~~~~v~~~~~~~~~~~~~~~~~ 158 (422) T protein:vir:13 80 EEYKEHELYYLLRYKPNPLMSSINFWKCLETQRTLKGNAYAYIERDR-KGKIIGLYPINSDNVTKIIDDDNFLSSLSKVW 158 (422) T ss_pred cccccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECC-CCcEEEEEEECCcceEEEEcCCcceeccceEE Confidence 44567899999999999999999999999999999999999999985 5899999999999999998887632 23 Q ss_pred EEEeecCCeEEEEcceeeEeecc-CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHH Q lcl|Aclame:pro 140 TFTDMLTAKQVKCFAHDVIHWKF-FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQR 218 (406) Q Consensus 140 ~~~~~~~g~~~~~~~~~vih~r~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~ 218 (406) +.....+|....+++++|||+|. ++.++++|+||+..+..+|..+.++.+++.++|+||+.|+++++.++.+++++.++ T Consensus 159 y~~~~~~g~~~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~ 238 (422) T protein:vir:13 159 YVVTDKNGKEHKLLPDEMLHFIGDITLDGLIGIKPLDYLRCTIENGRATQEFINKFFKNGLSIKGIVQYVGDLDEKAKKI 238 (422) T ss_pred EEEEeCCCeEEEEcccceEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHH Confidence 34445678888999999999996 47789999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHH Q lcl|Aclame:pro 219 ARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYV 295 (406) Q Consensus 219 ~~~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~ 295 (406) +++.|++.++| .++++++|+++|++|++++.++.|+||+|.+++++++||++|||||.+||. .++++|++++.+.|+ T Consensus 239 ~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVpp~~lg~~~~~~~sn~e~~~~~f~ 318 (422) T protein:vir:13 239 FKKEFESMSNGLENAHSISLLPFGYQFQPISLSMADAQFLENSKLTKRELAATFGMKSYHLNDLERATFNNLTEQQKDFY 318 (422) T ss_pred HHHHHHHHhcCccccCCceecCCCceeeeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHH Confidence 99999999988 577899999999999999999999999999999999999999999999986 457899999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccCccchh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCe Q lcl|Aclame:pro 296 TNDLPFYFDAITSELGLKTLNDKDRR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDR 370 (406) Q Consensus 296 ~~~i~P~~~~ie~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~ 370 (406) ++||.|++++||++|+++|++..++. .++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||+ T Consensus 319 ~~~l~P~~~~ie~~l~~~Ll~~~~~~~g~~i~fd~~~l~r~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~--~ggD~ 396 (422) T protein:vir:13 319 VTTLQSSLTVYEQEIQDKLFSQYETLQDVKAEFNVDTILRSDIKTRYEAYRIGIQGGFIEANEARRRENLPPV--EGGDR 396 (422) T ss_pred HHHHHHHHHHHHHHHHHhhCChhhhcCCceEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcCe Confidence 99999999999999999999988754 46677765 4567889999999999999999999999999999 66999 Q ss_pred eeeccCccchhhccccccccCcccCCCccCCC Q lcl|Aclame:pro 371 YQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAE 402 (406) Q Consensus 371 ~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~ 402 (406) +++|+|++|++...+. ..+||+++++ T Consensus 397 ~~~~~n~~~l~~~~~~------~~~~g~~~g~ 422 (422) T protein:vir:13 397 LLVNGNMIPIEMAGEQ------YKKGGEKGGK 422 (422) T ss_pred eeeccCccchhhcccc------cccCCCcCCC Confidence 9999999999976642 2356666666 No 10 >protein:vir:4454 Length: 414 # NCBI annotation: Portal Protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700377;genbank:gi:23505449;genbank:GeneID:955656 Probab=100.00 E-value=2.9e-94 Score=533.40 Aligned_cols=394 Identities=16% Similarity=0.263 Sum_probs=339.8 Q ss_pred CcccccccCCC----CcchhhHHHhhc----CCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc---cccc Q lcl|Aclame:pro 1 MSFFQPLGTSK----VSYDDYISSVLA----GDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD---IIHD 69 (406) Q Consensus 1 M~~f~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~---~~~~ 69 (406) ||||+++..++ .+....+...++ ...+..+++..++++++||+||++||++||++|+++++.++. .... T Consensus 1 Mg~f~~lf~r~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~Ia~~ia~~p~~~~~~~~~~~~~~~~ 80 (414) T protein:vir:44 1 MVFFSGLFQRKSDAPVTTPAELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRATG 80 (414) T ss_pred CchhhhhhccCccCcccchhhHhHhhccCccccCCceechhhhhccHHHHHHHHHHHHHhccCceEEEEecCCceeeccc Confidence 99998543221 112222333322 223456788899999999999999999999999999986543 5567 Q ss_pred chHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeE Q lcl|Aclame:pro 70 EDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQ 149 (406) Q Consensus 70 ~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~ 149 (406) |++.++|+.+||++|++++||+.++.+++++||+|++++++ +|+|.+|+|++|..|++..+.++.++|.+. ..+|.. T Consensus 81 ~~~~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gna~~~i~~~--~g~~~~L~~l~~~~v~~~~~~~~~~~y~~~-~~~g~~ 157 (414) T protein:vir:44 81 ERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKA--FGEVAELLPVDPGCVVPKLNSSWEPVYQVT-FPDGST 157 (414) T ss_pred chHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEeC--CCcEEEEEEEcCceEEEEECCCCcEEEEEE-ecCceE Confidence 99999999999999999999999999999999999999875 489999999999999999988888877655 446778 Q ss_pred EEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 150 VKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG 229 (406) Q Consensus 150 ~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g 229 (406) ..+++++|||+|+++.++++|+||+..+..+++.+.++.++..++|+||++|++++..++.+++|+.++++++|++.++| T Consensus 158 ~~~~~~evih~~~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~~~~~~g 237 (414) T protein:vir:44 158 DVLSQEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTG 237 (414) T ss_pred EEEccccEEEecCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCHHHHHHHHHHHHHHhcC Confidence 89999999999998889999999999999999999999999999999999999999999999999999999999999988 Q ss_pred -cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 -SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYFDAI 306 (406) Q Consensus 230 -~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~~~i 306 (406) .|+|+++++++|++|++++.++.|+||+|.+++++++||++|||||.+||. .++++|++++.+.|+++||+|++++| T Consensus 238 ~~n~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~~~~~~t~~n~e~~~~~~~~~~l~P~~~~i 317 (414) T protein:vir:44 238 LGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRI 317 (414) T ss_pred ccccCcceecCCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHHHHHHH Confidence 678999999999999999999999999999999999999999999999986 45789999999999999999999999 Q ss_pred HHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhh Q lcl|Aclame:pro 307 TSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDK 382 (406) Q Consensus 307 e~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~ 382 (406) |++||++|++..++..++++|+. +.|.+++++.+.+++++|++|+||+|+++|+||+ ||||++++|.|+++... T Consensus 318 e~~ln~~L~~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~--~ggD~~~~~~n~~~~~~ 395 (414) T protein:vir:44 318 EQRINTGLVRKSKQGVFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPR--PGGDVYLTPMNMTTKPS 395 (414) T ss_pred HHHHHhhcCCccccCceEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcceecccccccccCC Confidence 99999999998887777788875 4567899999999999999999999999999999 67999999999875542 Q ss_pred ccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 383 KEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 383 ~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) .. ....+++ +++++|++ T Consensus 396 ~~------~~~~~~~-~~~~~d~~ 412 (414) T protein:vir:44 396 DG------SKAGKQK-DNANADET 412 (414) T ss_pred cc------ccCCCCC-CCCCCCCC Confidence 11 1111222 23334444 No 11 >protein:vir:100150 Length: 437 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945033;genbank:gi:38707893;genbank:GeneID:2744197 Probab=100.00 E-value=6.8e-94 Score=531.37 Aligned_cols=402 Identities=18% Similarity=0.262 Sum_probs=342.4 Q ss_pred Ccc-----c--------ccccCCCCcchhhHHHhhcCC---cccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC Q lcl|Aclame:pro 1 MSF-----F--------QPLGTSKVSYDDYISSVLAGD---VSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG 64 (406) Q Consensus 1 M~~-----f--------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 64 (406) |.- | ++++...+..+..+...+++. .+..++..+|+++++||+||++||++||+|||++|+.+. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~ci~~Ia~~ia~lp~~~~~~~~ 80 (437) T protein:vir:10 1 MKQGKQRALGRIKSSFLKWLGVPISLTDGSFWSAWGGMGSSSGETVTADSALQLSAVWSCVRLIAETIATLPLNLYQTKP 80 (437) T ss_pred CCcchhhhhhhhHHhhhhhcCCcccCCchhHHHhhcccccCCCceechHhhhccHHHHHHHHHHHHHHhhCceeEEEEcC Confidence 441 1 111112222233333443332 345688899999999999999999999999999997643 Q ss_pred ----cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEE Q lcl|Aclame:pro 65 ----DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYT 140 (406) Q Consensus 65 ----~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~ 140 (406) .....|++.++|+.+||++||+++||+.++.+++++||+|++++++ . |++++|||++|+.|++..+.+|.+.|. T Consensus 81 ~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~-g~~~~L~~l~p~~v~i~~~~~g~~~y~ 158 (437) T protein:vir:10 81 DGTRVLAKQHRLYTVIHSQPNAENTAAEFWEVIVASMLLWGNGYARKLRS-A-GVLIGLELMLPQRTTVKRLTSGALQYT 158 (437) T ss_pred CCceeeccccHHHHHhhccCCcCCCHHHHHHHHHHHHhhcCCeEEEEEec-C-CcEEEEEEEcCcceEEEECCCCeEEEE Confidence 3456799999999999999999999999999999999999999997 3 899999999999999999888888776 Q ss_pred EEeecCCeEEEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHH Q lcl|Aclame:pro 141 FTDMLTAKQVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRAR 220 (406) Q Consensus 141 ~~~~~~g~~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~ 220 (406) +. ..+|....+++++|+|||+++.++++|+||+.+++.+|..+.++.++..++|+||++|++++..++.+++++.++++ T Consensus 159 ~~-~~~g~~~~~~~~dIih~r~~~~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~ 237 (437) T protein:vir:10 159 YR-NVDGTVSTLAEDDVFHVRGFSLDGLMGLTPIQYAREVLGNSTAANKTSASVFRNGLRPSGVLSTDQILQKEKRAEIR 237 (437) T ss_pred EE-ecCceEEEEccccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHHHH Confidence 55 45678889999999999998889999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc----cchhHHHHHHHHH Q lcl|Aclame:pro 221 QEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS----PNQSVAQLMEDYV 295 (406) Q Consensus 221 ~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~----~~~n~~~~~~~~~ 295 (406) ++|++.++| .|+|+++|+++|++|+++++++.|+||+|++++++++||++|||||.+||... +++|++++.+.|+ T Consensus 238 ~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~e~~~~~f~ 317 (437) T protein:vir:10 238 TDLAEQFGGAMQAGKTMVLEAGMKYQAITMNPGDVQLLETRAFNIEEICRWYRVPPFMVGHSEKSTSWGTGIEQQTLGFL 317 (437) T ss_pred HHHHHHhcCccccCcceeccCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccchHHHHHHHHH Confidence 999999988 67899999999999999999999999999999999999999999999998643 3588999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCee Q lcl|Aclame:pro 296 TNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRY 371 (406) Q Consensus 296 ~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~ 371 (406) ++||.||+.+||++|+++||+..++..++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+++ +++.+ T Consensus 318 ~~tl~P~~~~ie~~l~~kll~~~e~~~~~~~fd~~~ll~~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~g-g~~~~ 396 (437) T protein:vir:10 318 TFTLRPWLTRIEQAARRSLLRPGERDQFYAEFSVEGLLRADSAGRAAFYSTMTQNGLMTRDECRAKENLPPMGG-NAAVL 396 (437) T ss_pred HHHHHHHHHHHHHHHHhhccCccccCceEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC-CcceE Confidence 9999999999999999999998887777788875 456789999999999999999999999999999963 34567 Q ss_pred eeccCccchhhccccccccCc--ccCCCccCCCCCCC Q lcl|Aclame:pro 372 QSSLNYVFLDKKEEYQDKVGI--KGKGGEVNAEEDKS 406 (406) Q Consensus 372 ~~~~n~~~~~~~~~~~~~~~~--~~~gg~~~~~~~~~ 406 (406) +++.|++|++...+.+.+.+. ..++++.+.++++. T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (437) T protein:vir:10 397 TVQSALLPIDKLGEHTTATAAQDALKAWLYQEEKTRA 433 (437) T ss_pred eecCcccchhhccCcCCCcchhccccccCCCCCCCCc Confidence 799999999987664443322 34555544444444 No 12 >protein:vir:81072 Length: 432 # NCBI annotation: p07 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285677;genbank:gi:148727185;genbank:GeneID:5247117 Probab=100.00 E-value=8.2e-94 Score=530.91 Aligned_cols=398 Identities=16% Similarity=0.192 Sum_probs=337.9 Q ss_pred CcccccccC---CCC--cc--------hhh---HHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecC- Q lcl|Aclame:pro 1 MSFFQPLGT---SKV--SY--------DDY---ISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVN- 63 (406) Q Consensus 1 M~~f~~~~~---~~~--~~--------~~~---~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~- 63 (406) ||||++.+. +.+ +. ..+ .........+..++..+||++++||+||++||++||+||+++|+.+ T Consensus 7 mg~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~V~~~i~~Ia~~ia~lp~~~y~~~~ 86 (432) T protein:vir:81 7 LGLFGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAIAAMPLTMYMRTP 86 (432) T ss_pred cchhhhhhhhcccccccccccccccccCccchhhhcccccccCcccchHhhhccHHHHHHHHHHHHhhhhCceeeEEecC Confidence 999987431 111 11 111 1122223456678999999999999999999999999999998753 Q ss_pred --CcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEE Q lcl|Aclame:pro 64 --GDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTF 141 (406) Q Consensus 64 --~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~ 141 (406) +.....|++.++|+.+||++||+++||+.++.+++++||||++++++ +|++.+|||++|+.|++..+.+|.++|.+ T Consensus 87 ~g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnayv~i~~~--~g~~~~L~~l~~~~v~v~~~~~g~~~y~~ 164 (432) T protein:vir:81 87 DGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT--DGRIESLQYLANDRLTITTDPKGNTAYRY 164 (432) T ss_pred CcceecccchHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec--CCcEEEEEEEcCCceEEEECCCCcEEEEE Confidence 23456799999999999999999999999999999999999999885 48999999999999999999888887766 Q ss_pred EeecCCeEEEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHH Q lcl|Aclame:pro 142 TDMLTAKQVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQ 221 (406) Q Consensus 142 ~~~~~g~~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~ 221 (406) . ..+|..+.+++++|+|+|+++.++++|+||+..+..+|..+.+++++..++|+||++|++++..++.+++++++++++ T Consensus 165 ~-~~~g~~~~~~~~~iih~r~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~~~ 243 (432) T protein:vir:81 165 R-RTDGQMIDIPKQQIWKIMGYSLDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDDQYDSFAK 243 (432) T ss_pred E-ecCceEEEEccccEEEecCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCCCCHHHHHHHHH Confidence 5 447888999999999999999999999999999999999999999999999999999999999999999999999888 Q ss_pred HHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc-----cchhHHHHHHHHHH Q lcl|Aclame:pro 222 EFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS-----PNQSVAQLMEDYVT 296 (406) Q Consensus 222 ~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~-----~~~n~~~~~~~~~~ 296 (406) +|.. +.++|++++|++|++|++++++++|+||+|.+++++++||++|||||.+||... +++|+|++.+.|++ T Consensus 244 ~~~~---~~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~sn~eq~~~~f~~ 320 (432) T protein:vir:81 244 KVSG---SVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQLGFLT 320 (432) T ss_pred HHhh---hhcCCCceecCCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCccccccchHHHHHHHHHH Confidence 8753 357789999999999999999999999999999999999999999999998632 34789999999999 Q ss_pred HHHHHHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeee Q lcl|Aclame:pro 297 NDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQ 372 (406) Q Consensus 297 ~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~ 372 (406) +||.||+++||++|+++|++..++..++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||++ ++++.++ T Consensus 321 ~tl~P~~~~ie~~l~~kLl~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~t~NE~R~~~glpp~~-g~~~~~~ 399 (432) T protein:vir:81 321 MTLSPWLRRIEQSIALNLLSPAERRRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLG-GNAAVLT 399 (432) T ss_pred HHHHHHHHHHHHHHHhhccCccccCceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC-CCcceEe Confidence 999999999999999999998887777888875 56788999999999999999999999999999995 3457778 Q ss_pred eccCccchhhccccccccCcccCCCccCCCCCC Q lcl|Aclame:pro 373 SSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 373 ~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~ 405 (406) ++.|++|++.......+......+++++++..| T Consensus 400 ~~~~~~pl~~~~~~~~~~~~~~~~n~~~~~~~~ 432 (432) T protein:vir:81 400 VQSAMVPLDSIGLQASPEPASGLGNQQQDKVSK 432 (432) T ss_pred ecCcccchhhhccCCCCCCCCCCCCcccccccC Confidence 999999998776543333322233333333333 No 13 >protein:vir:105064 Length: 421 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1465 # MgeName: phiKO2 # Cross-refs: genbank:acc:YP_006584;genbank:gi:46402090;genbank:GeneID:2777930 Probab=100.00 E-value=9.4e-94 Score=530.60 Aligned_cols=398 Identities=17% Similarity=0.157 Sum_probs=341.5 Q ss_pred CcccccccCCC--CcchhhHHHhhcCC------cccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC----cccc Q lcl|Aclame:pro 1 MSFFQPLGTSK--VSYDDYISSVLAGD------VSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG----DIIH 68 (406) Q Consensus 1 M~~f~~~~~~~--~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~----~~~~ 68 (406) |.|++++++++ .+...++..++++. .+..+++.+||++++||+||++||++||+|||++|+.++ +... T Consensus 1 m~~~~~~~~~~~~~s~~~~w~~~~~~~~~~~~~~g~~vt~~~al~~~~v~~~i~~Ia~~iA~lp~~~~~~~~~g~~~~~~ 80 (421) T protein:vir:10 1 MFIPQMFEGKKRSVSGGGFWEAMLGGVRSSHSKAGVMITPETALALSAVRACVTLLAESVAQLPVELYRRDKNGGRQRAT 80 (421) T ss_pred CCCcchhcccccccCcchhhHHHhhhhccCcccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEEcCCCceeecc Confidence 99988765433 34444554444322 235689999999999999999999999999999997543 2456 Q ss_pred cchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCe Q lcl|Aclame:pro 69 DEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAK 148 (406) Q Consensus 69 ~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~ 148 (406) +|++.++|+.+||++||+++||+.++.+++++||+|++++++ ..|+|.+|||++|+.|++..+.+|.++|.+. ..| T Consensus 81 ~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~-~~G~~~~L~~l~~~~v~v~~~~~g~~~y~~~--~~g- 156 (421) T protein:vir:10 81 DHPIYDLIHSQPNKKDTSFEYFEQQQGLLGLEGNCYSIIDRD-GKGYPKELIPINPKKVIVLKGPDGMPYYEIP--EIG- 156 (421) T ss_pred cchHHHHHhhcccCCCCHHHHHHHHHHHHhhcCCeEEEEEEc-CCCcEEEEEEecCceEEEEECCCceEEEEEc--CCC- Confidence 789999999999999999999999999999999999999998 4589999999999999999988887766542 333 Q ss_pred EEEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCC----CHHHHHHHHHHHH Q lcl|Aclame:pro 149 QVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQL----SGDARQRARQEFE 224 (406) Q Consensus 149 ~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~----~~e~~~~~~~~~~ 224 (406) ..+++++|+|+|+++.++++|+||+..+..+|..+.++.++..++|+||+.|++++..+... ++|+.+++++.|+ T Consensus 157 -~~~~~~eiih~~~~~~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~e~~~~~~~~~~ 235 (421) T protein:vir:10 157 -ETLPMRMMHHVKVFSLDGYIGSSPIQTNADVLGLNLAVEEHASAVFRRGATMSGVIERPKEAPAIKSQEKIDQLLAKWT 235 (421) T ss_pred -cEEchhhEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCccCccCCHHHHHHHHHHHH Confidence 36899999999999999999999999999999999999999999999999999999887654 8999999999999 Q ss_pred HHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 225 KMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPF 301 (406) Q Consensus 225 ~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P 301 (406) +.++| .+++++++|++|++|++++.++.|+||+|.+++++++||++|||||.+||. .++++|+|++.+.|+++||.| T Consensus 236 ~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~~tl~P 315 (421) T protein:vir:10 236 DRYSGINNMFSVALLQEGMSYKQMSQDNEKAQLLQSRQWGVEEVCRLYKIPPHMVQMLAKATNNNIEHQGLQFVMYTLLA 315 (421) T ss_pred HHhcCccccCcceecCCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCcCCccccHHHHHHHHHHHHHHH Confidence 99988 577899999999999999999999999999999999999999999999986 457899999999999999999 Q ss_pred HHHHHHHHHHhhccCccchhhhhhhhccc----chhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCc Q lcl|Aclame:pro 302 YFDAITSELGLKTLNDKDRRLYHIEFDTR----SVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNY 377 (406) Q Consensus 302 ~~~~ie~~l~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~ 377 (406) ++++||++|+++|++..++..++++|+++ .|.+++++.+.+++++|++|+||+|+++|+||+ ||||++++|+|+ T Consensus 316 ~~~~ie~~ln~kL~~~~~~~~~~v~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~--~ggD~~~~~~n~ 393 (421) T protein:vir:10 316 WLKRHEGALQRDLLLPSERRDLYIEFNVSGLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLPPI--AGGDKYLTPLNM 393 (421) T ss_pred HHHHHHHHHhhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcceeeecccc Confidence 99999999999999988877778888764 578899999999999999999999999999999 679999999999 Q ss_pred cchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 378 VFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 378 ~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) ++++.....+.. ....+++|+|.-...+ T Consensus 394 ~~~~~~~~~~~~-~~~~~~~e~d~~~~~~ 421 (421) T protein:vir:10 394 VDSAQIIPGDKK-PTAQQMAEIDTILSRT 421 (421) T ss_pred ccccccccCCCC-cccccCcccccccccC Confidence 988765443322 2222333322222222 No 14 >protein:vir:483 Length: 413 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543090;swissprot:trembl:q8w629;genbank:gi:18249902;uniprot:Q8W629;genbank:GeneID:929685 Probab=100.00 E-value=3.5e-93 Score=527.46 Aligned_cols=396 Identities=15% Similarity=0.260 Sum_probs=343.2 Q ss_pred CcccccccCCCCcchhhHHHhhcC----CcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc---ccccchHH Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAG----DVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD---IIHDEDIN 73 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~---~~~~~~~~ 73 (406) ++||++++..+.+....+..++++ ..+..++.+.++++++||+||++||++||++|+++++.++. ....|++. T Consensus 4 ~~~f~r~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~l~~~~v~~~i~~Ia~~iA~~p~~~~~~~~~~~~~~~~~~~~ 83 (413) T protein:vir:48 4 SGLFQRKSDAPVTTPAELAEAIGLSYDTYTGKRISSQRAMRLTAVYSCVRVLAESVGMLPCSLYKISGTLKTRVVDERLH 83 (413) T ss_pred chhhccCccCCccchHHHHHhhhcCcccccCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCcceeecccHHH Confidence 567777665554444444444432 34567888999999999999999999999999999986433 45679999 Q ss_pred HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEc Q lcl|Aclame:pro 74 YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCF 153 (406) Q Consensus 74 ~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~ 153 (406) ++|+.+||++||+++||+.++.+++++||+|++++++ .|+|++|||++|+.|++..+.++.++|.+. ..+|..+.++ T Consensus 84 ~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~--~g~~~~L~~l~~~~v~~~~~~~~~~~y~~~-~~~g~~~~~~ 160 (413) T protein:vir:48 84 KLVSAKPNGYMTPQEFWELVIVCLCLRGNFYAYKVKA--LGEVVELLPIDPGCVEPKLNSQWQPVYQVT-FPDGSVDVLT 160 (413) T ss_pred HHHHhhccCCCCHHHHHHHHHHHHhhcCceEEEEEeC--CCcEEEEEEEcCceEEEEEcCCceEEEEEE-ecCceEEEEc Confidence 9999999999999999999999999999999999986 489999999999999999988888776654 4467788899 Q ss_pred ceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc-ccc Q lcl|Aclame:pro 154 AHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG-SVG 232 (406) Q Consensus 154 ~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g-~~~ 232 (406) +++|||+|+++.++++|+||+..+..+|+.+.++.++..++|+||+.|+++++.++.+++|+.+++++.|++.++| .|+ T Consensus 161 ~~evih~~~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g~~n~ 240 (413) T protein:vir:48 161 QDEIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFGNGAVTSGVLRTEQKLTPDAYERLKKDFEERHTGLGNA 240 (413) T ss_pred cccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcCcccc Confidence 9999999998889999999999999999999999999999999999999999999999999999999999999988 688 Q ss_pred CceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 233 GSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYFDAITSEL 310 (406) Q Consensus 233 ~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l 310 (406) |+++++++|++|++++.+++|+||+|.+++++++||++|||||.+||. .++++|++++.+.|++.||.|++++||++| T Consensus 241 g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~n~e~~~~~f~~~~i~P~~~~ie~~l 320 (413) T protein:vir:48 241 HRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRIEQRI 320 (413) T ss_pred CcceecCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcCCCcccHHHHHHHHHHHHHHHHHHHHHHHH Confidence 999999999999999999999999999999999999999999999996 467899999999999999999999999999 Q ss_pred HhhccCccchhhhhhhhccc----chhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcccc Q lcl|Aclame:pro 311 GLKTLNDKDRRLYHIEFDTR----SVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEY 386 (406) Q Consensus 311 ~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~ 386 (406) |++|+++.++..++++|+++ .|.+++++++.+++++|++|+||+|+++|+||+ ||||++++|+|+++++..... T Consensus 321 ~~~L~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p~--~ggD~~~~~~n~~~~~~~~~~ 398 (413) T protein:vir:48 321 NTGLVRESKQGKFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPR--PGGDVYLTPMNMTTSPSAGDD 398 (413) T ss_pred HhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcceeecccccccccccccc Confidence 99999988877778888764 467889999999999999999999999999999 679999999999988754321 Q ss_pred ccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 387 QDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 387 ~~~~~~~~~gg~~~~~~~~~ 406 (406) . ..+.++| +.+++.+ T Consensus 399 ~---~~~~~~~--~~~~~~~ 413 (413) T protein:vir:48 399 N---GKKKESG--DADKTAS 413 (413) T ss_pred C---CCCCCCC--CccccCC Confidence 1 1111112 2222222 No 15 >protein:vir:4337 Length: 434 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061500;genbank:gi:9635589;genbank:GeneID:1262858 Probab=100.00 E-value=3.2e-93 Score=527.71 Aligned_cols=399 Identities=17% Similarity=0.214 Sum_probs=342.9 Q ss_pred CcccccccCCCC-cchhhHHHhhcCC--cccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC----cccccchHH Q lcl|Aclame:pro 1 MSFFQPLGTSKV-SYDDYISSVLAGD--VSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG----DIIHDEDIN 73 (406) Q Consensus 1 M~~f~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~----~~~~~~~~~ 73 (406) .++|.+.+...+ +.+.++..++++. .+..++..+||++++||+||++||++||++|+++|+.++ .....|+++ T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~v~~~~al~~~~V~~~i~~ia~~ia~lp~~~~~~~~~g~~~~~~~~~l~ 97 (434) T protein:vir:43 18 SSLFGWGGKTIRLTDGAFWSQFLGRESSSGKKVTVDKAMKLSAVWACVRLISTSVAGLPLGVYERKADGSRVDARSFPLY 97 (434) T ss_pred hhhhcccccccccCchHHHHHHhcCCccCCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEEcCCCccccccccHHH Confidence 334443332222 3344455555443 345788999999999999999999999999999997643 245689999 Q ss_pred HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEc Q lcl|Aclame:pro 74 YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCF 153 (406) Q Consensus 74 ~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~ 153 (406) +||+.+||++||+++||+.++.+++++||+|+++.++ +|+|++|+|++|+.|++..+.+|.+.|++. ..+|..+.|+ T Consensus 98 ~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~~~--~G~~~~L~~l~p~~v~~~~~~~g~~~y~~~-~~~g~~~~~~ 174 (434) T protein:vir:43 98 DVVHNSPNDDMTAFQFWQAMVASMLLWGNAYAEIRRA--AGRPAALDFLLPSRVDLECDENGRLKYFYT-TKKGARREIE 174 (434) T ss_pred HHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC--CCcEEEEEEEcCcceEEEEcCCCeEEEEEE-ecCceEEEEc Confidence 9999999999999999999999999999999998875 599999999999999999998888876554 5677889999 Q ss_pred ceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccC Q lcl|Aclame:pro 154 AHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGG 233 (406) Q Consensus 154 ~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~ 233 (406) +++|||+|+++.++++|+||+..++.+|..+.++.++..++|+||++|+++++.++.+++++.+++++.|++..++.|+| T Consensus 175 ~~eVih~~~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~r~~~~~~~g~~nag 254 (434) T protein:vir:43 175 RTNMLHIPAFTLDGRIGLSAIRYGVDVFGSVMSAEDAANGTFKNGLLPTVAFKVDRILQPAQREEFREYVKSVSGAMNSG 254 (434) T ss_pred cccEEEecCcCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEecCCCCCHHHHHHHHHHHHHhcCccccC Confidence 99999999989899999999999999999999999999999999999999999999999999999999998877778899 Q ss_pred ceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc----cchhHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 234 SPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS----PNQSVAQLMEDYVTNDLPFYFDAITSE 309 (406) Q Consensus 234 ~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~----~~~n~~~~~~~~~~~~i~P~~~~ie~~ 309 (406) +++|+++|++|++++.++.|+||+|.+++++++||++|||||.+||... +++|.+++...|+++||.||+.+||++ T Consensus 255 ~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s~~e~~~~~f~~~~L~P~~~~ie~~ 334 (434) T protein:vir:43 255 RSPVLEQGITPETIGINPVDAQLLETREHGVIEICRWFGVPPWMIGQTDKGSNWGTGLEQQMLAFLTFSISSITNQIQQC 334 (434) T ss_pred CccccCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcCCccccchHHHHHHHHHHHHHHHHHHHHHHH Confidence 9999999999999999999999999999999999999999999998632 368899999999999999999999999 Q ss_pred HHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccc Q lcl|Aclame:pro 310 LGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEE 385 (406) Q Consensus 310 l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~ 385 (406) ||++|++..++..++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++|+|++|++...+ T Consensus 335 ln~kL~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~p~--~ggD~~~~~~n~~~~~~~~~ 412 (434) T protein:vir:43 335 VNKRLLTAPERIRYYAEFSLEGFLKADSAGRAAWYSTMAQNGFMTRNEGRRKENLPEL--PGGDILTVQSNLVPIDQLGQ 412 (434) T ss_pred HHhhcCChhhhcCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCeEeeccCccchhhhhc Confidence 99999998887777888875 4578899999999999999999999999999999 66999999999999998775 Q ss_pred cccccCcccCCCccC---CCCCCC Q lcl|Aclame:pro 386 YQDKVGIKGKGGEVN---AEEDKS 406 (406) Q Consensus 386 ~~~~~~~~~~gg~~~---~~~~~~ 406 (406) .+.+... +++..+ .++.+- T Consensus 413 ~~~~~~~--~~~~~~~~~~~~~~~ 434 (434) T protein:vir:43 413 SNKSQAV--RAALMNWFSQPEPQE 434 (434) T ss_pred cCCCcch--hhhhhccCCCCCCCC Confidence 4444322 222221 111111 No 16 >protein:vir:102080 Length: 429 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512313;genbank:gi:89152482;genbank:GeneID:3953073 Probab=100.00 E-value=6.1e-93 Score=526.12 Aligned_cols=397 Identities=18% Similarity=0.224 Sum_probs=341.6 Q ss_pred Cccccccc---CCC-------CcchhhHHHhhcCC-cccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC---cc Q lcl|Aclame:pro 1 MSFFQPLG---TSK-------VSYDDYISSVLAGD-VSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG---DI 66 (406) Q Consensus 1 M~~f~~~~---~~~-------~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~---~~ 66 (406) ||||+++. ++. .....++..+++.+ ++..++..+|+++++||+||++||++||++||++|+.++ +. T Consensus 1 M~~~~~~f~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~l~~~~~~~~~~~~~~ 80 (429) T protein:vir:10 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGIQR 80 (429) T ss_pred CchhhhhhcccccCcccccccCCChHHHHHHhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEEecCCceee Confidence 99885432 111 12344556665543 345678889999999999999999999999999997542 35 Q ss_pred cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcce----EEEEE Q lcl|Aclame:pro 67 IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI----VYTFT 142 (406) Q Consensus 67 ~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~----~~~~~ 142 (406) ...|+++++|+.+||++||+++||+.++.+++++||+|++++++ ..|++++|+|++|+.|++..+..+.+ ..++. T Consensus 81 ~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~G~~~~L~~i~~~~v~v~~~~~~~~~~~~~~~~~ 159 (429) T protein:vir:10 81 GTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD-RKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWYV 159 (429) T ss_pred ccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEEcCceeEEEEcCcccccccceEEEE Confidence 67789999999999999999999999999999999999999998 45889999999999999988876532 23445 Q ss_pred eecCCeEEEEcceeeEeecc-CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHH Q lcl|Aclame:pro 143 DMLTAKQVKCFAHDVIHWKF-FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQ 221 (406) Q Consensus 143 ~~~~g~~~~~~~~~vih~r~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~ 221 (406) ...+|..+.|++++|||||+ ++.++++|+||+..+..++..+.++.++..++|+||+.|+++++.++.+++++.+++++ T Consensus 160 ~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~l~~e~~~~~~~ 239 (429) T protein:vir:10 160 VNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFRE 239 (429) T ss_pred EccCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHHHHH Confidence 56778888999999999996 47789999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHH Q lcl|Aclame:pro 222 EFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTND 298 (406) Q Consensus 222 ~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~ 298 (406) .|++.++| .|+++++++++|++|++++.++.|+|++|.+++++++||++|||||.+||. .++++|++++.+.|++.+ T Consensus 240 ~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~sn~e~~~~~f~~~~ 319 (429) T protein:vir:10 240 NFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTDT 319 (429) T ss_pred HHHHHhccccccCceeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHH Confidence 99999988 678899999999999999999999999999999999999999999999985 557899999999999999 Q ss_pred HHHHHHHHHHHHHhhccCccchh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeee Q lcl|Aclame:pro 299 LPFYFDAITSELGLKTLNDKDRR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQS 373 (406) Q Consensus 299 i~P~~~~ie~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~ 373 (406) |.||+++||++||++|++..++. .++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++ T Consensus 320 l~P~~~~ie~~ln~kl~~~~~~~~g~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~--~ggD~~~~ 397 (429) T protein:vir:10 320 LQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE--AGGDRLLV 397 (429) T ss_pred HHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcCeeee Confidence 99999999999999999887653 46677765 5578899999999999999999999999999999 67999999 Q ss_pred ccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 374 SLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 374 ~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) |+|++|++..++.+ .|||+++++.++. T Consensus 398 ~~n~~~~d~~~~~~------~k~g~~~~~~~~~ 424 (429) T protein:vir:10 398 NGNMLPIDMAGQAY------LKGGDTNGEVSKE 424 (429) T ss_pred cccccchhhccccc------cCCCCCCCCCCCC Confidence 99999998765432 2334433333332 No 17 >protein:vir:81152 Length: 411 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285809;genbank:gi:148747730;genbank:GeneID:5247195 Probab=100.00 E-value=2.9e-93 Score=527.92 Aligned_cols=386 Identities=18% Similarity=0.235 Sum_probs=339.8 Q ss_pred CcccccccC----C---CCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC---cccccc Q lcl|Aclame:pro 1 MSFFQPLGT----S---KVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG---DIIHDE 70 (406) Q Consensus 1 M~~f~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~---~~~~~~ 70 (406) ||||++++. + .....+.+..+++ ...+++.+|+++++||+||++||++||++|+++|+.++ .+...| T Consensus 1 MG~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~~~~~~~~~ 77 (411) T protein:vir:81 1 MGWWSRLTRFFRPRNETVDMTNPLLLQWLG---VDPDTPRNQLSEATYFACLKILSESLGKLPLKMYQKTERGIVKSDRE 77 (411) T ss_pred CchHHHHHhhccCcccccccchHHHHHHhc---CcccChhhhhccHHHHHHHHHHHHhHhhCceeEEEecCCceeeeccc Confidence 999976422 1 1123344555543 34577889999999999999999999999999998643 245678 Q ss_pred hHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCc------ceEEEEEee Q lcl|Aclame:pro 71 DINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNH------EIVYTFTDM 144 (406) Q Consensus 71 ~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g------~~~~~~~~~ 144 (406) +++++|+.+||++||+++||+.++.+++++||+|++++++ +|++.++||++|+.|++..++.+ .++|.+... T Consensus 78 ~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~--~g~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 155 (411) T protein:vir:81 78 ELYNLLKLRPNPYMTSSVFWSTVEMNRNHYGNAYVWCQYS--GPQLQALWILPSQYVTIVVDDRGLLGEKNAIWYRYNDP 155 (411) T ss_pred HHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEec--CCceEEEEEECCceEEEEEcCcccccccceEEEEEEec Confidence 9999999999999999999999999999999999999987 48999999999999999887665 345666667 Q ss_pred cCCeEEEEcceeeEeecc-CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHH Q lcl|Aclame:pro 145 LTAKQVKCFAHDVIHWKF-FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEF 223 (406) Q Consensus 145 ~~g~~~~~~~~~vih~r~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~ 223 (406) .+|..+.+++++|||+|. ++.++++|+||+.++..++..+.++.++..++|+||+.|+++++.++.+++++.++++++| T Consensus 156 ~~g~~~~~~~~eiih~k~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~ 235 (411) T protein:vir:81 156 YDGKMYVFRNDEILHFKTSVTFDGITGLSVRDVLKHTVDGALESQKFMNNLYKTGLTGKAVLEYTGDLNQEARDRLVKGF 235 (411) T ss_pred CCceEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCHHHHHHHHHHH Confidence 788889999999999996 5778999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHH Q lcl|Aclame:pro 224 EKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLP 300 (406) Q Consensus 224 ~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~ 300 (406) ++.++| +++|+++++++|++|+++++++.|+||+|++++++++||++|||||++||. .++++|++++.+.|++++|. T Consensus 236 ~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~n~e~~~~~f~~~~l~ 315 (411) T protein:vir:81 236 EQFANGSKNAGKIIPVPLGMKLVPLDIKLTDSQFFELKKYTALQIAAAFGIKPNQINDYEKSSYASAEAQNLAFYVDTLL 315 (411) T ss_pred HHHhcCccccCCceecCCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCchhHHHHHHHHHHHHHH Confidence 999988 578899999999999999999999999999999999999999999999986 35789999999999999999 Q ss_pred HHHHHHHHHHHhhccCccchh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeecc Q lcl|Aclame:pro 301 FYFDAITSELGLKTLNDKDRR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSL 375 (406) Q Consensus 301 P~~~~ie~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~ 375 (406) |++++||++|+++|++..+.. .++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++++ T Consensus 316 P~~~~ie~~l~~~ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~--~ggD~~~~~~ 393 (411) T protein:vir:81 316 YVLKQYEEEITYKILSNDLISQGHYFKFNVNVILRADIKTQMDSLSTAVQNGIMTPNEARDYLDMPAD--DYGNNLMANG 393 (411) T ss_pred HHHHHHHHHHHhhcCChhhcCCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCeeeecc Confidence 999999999999999887643 46677765 5577889999999999999999999999999999 6799999999 Q ss_pred CccchhhccccccccCcccCCCcc Q lcl|Aclame:pro 376 NYVFLDKKEEYQDKVGIKGKGGEV 399 (406) Q Consensus 376 n~~~~~~~~~~~~~~~~~~~gg~~ 399 (406) |++|++...+ +..||||+ T Consensus 394 n~~pl~~~~~------~~~kgGd~ 411 (411) T protein:vir:81 394 NYIPLSMLGA------NYGKGGDS 411 (411) T ss_pred Cccchhhhhh------hhccCCCC Confidence 9999986442 34467776 No 18 >protein:vir:105002 Length: 432 # NCBI annotation: putative phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459967;genbank:gi:85701382;genbank:GeneID:3882143 Probab=100.00 E-value=6e-93 Score=526.17 Aligned_cols=401 Identities=17% Similarity=0.220 Sum_probs=341.4 Q ss_pred Cccccccc------CCC-------CcchhhHHHhhcCC-cccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC-- Q lcl|Aclame:pro 1 MSFFQPLG------TSK-------VSYDDYISSVLAGD-VSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG-- 64 (406) Q Consensus 1 M~~f~~~~------~~~-------~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~-- 64 (406) ||||+++. ++. ......+..+++++ .+..++..+|+++++||+||++||++||++|+++++.++ T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 80 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhCCCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 99876531 111 12334555666543 345788889999999999999999999999999997643 Q ss_pred -cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcce----EE Q lcl|Aclame:pro 65 -DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI----VY 139 (406) Q Consensus 65 -~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~----~~ 139 (406) +....|++++||+.+||++||+++||+.++.+++++||+|++++++ ..|+|++|+|++|+.|++..+..+.+ .. T Consensus 81 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~ 159 (432) T protein:vir:10 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD-RKGKVQALWPIDASKVTVYIDDVGLLNSKTKM 159 (432) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEEcCceeEEEEcCcccccccceE Confidence 3457899999999999999999999999999999999999999998 55899999999999999988765432 23 Q ss_pred EEEeecCCeEEEEcceeeEeecc-CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHH Q lcl|Aclame:pro 140 TFTDMLTAKQVKCFAHDVIHWKF-FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQR 218 (406) Q Consensus 140 ~~~~~~~g~~~~~~~~~vih~r~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~ 218 (406) ++....+|..+.|++++|||+|+ ++.++++|+||+..+..+|..+.++.++..++|+||+.|+++++.++.+++++.++ T Consensus 160 ~y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~~ 239 (432) T protein:vir:10 160 WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 239 (432) T ss_pred EEEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHH Confidence 44556778888999999999996 57889999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHH Q lcl|Aclame:pro 219 ARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYV 295 (406) Q Consensus 219 ~~~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~ 295 (406) ++++|++.++| .++++++++++|++|+++++++.|+||++.+++++++||++|||||.+||. .++++|++++.+.|+ T Consensus 240 ~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~~~ 319 (432) T protein:vir:10 240 FRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 319 (432) T ss_pred HHHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHH Confidence 99999999988 678999999999999999999999999999999999999999999999985 567899999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccCccchh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCe Q lcl|Aclame:pro 296 TNDLPFYFDAITSELGLKTLNDKDRR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDR 370 (406) Q Consensus 296 ~~~i~P~~~~ie~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~ 370 (406) +++|.|++++||++||++|++..++. .++++|+. +.|.+++++++.+++++|++|+||+|+++|+||+ |+||+ T Consensus 320 ~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi--~ggD~ 397 (432) T protein:vir:10 320 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE--AGGDR 397 (432) T ss_pred HHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCe Confidence 99999999999999999999887653 45667764 4578899999999999999999999999999999 67999 Q ss_pred eeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 371 YQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 371 ~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) +++|+|++|++...+.+.. +..++++.+.+++++ T Consensus 398 ~~~~~n~~~~~~~~~~~~k--~~~~~~~~~~~~~~~ 431 (432) T protein:vir:10 398 LLVNGNMLPIDMAGQAYLK--GGDTNGEVSKEGNEG 431 (432) T ss_pred EeecccccchhhccccccC--CCCCCCCCCCCCCCC Confidence 9999999999876643221 111222222333333 No 19 >protein:vir:102855 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338135;genbank:gi:77020228;genbank:GeneID:3703764 Probab=100.00 E-value=6e-93 Score=526.17 Aligned_cols=401 Identities=17% Similarity=0.220 Sum_probs=341.4 Q ss_pred Cccccccc------CCC-------CcchhhHHHhhcCC-cccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC-- Q lcl|Aclame:pro 1 MSFFQPLG------TSK-------VSYDDYISSVLAGD-VSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG-- 64 (406) Q Consensus 1 M~~f~~~~------~~~-------~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~-- 64 (406) ||||+++. ++. ......+..+++++ .+..++..+|+++++||+||++||++||++|+++++.++ T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 80 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhCCCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 99876531 111 12334555666543 345788889999999999999999999999999997643 Q ss_pred -cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcce----EE Q lcl|Aclame:pro 65 -DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI----VY 139 (406) Q Consensus 65 -~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~----~~ 139 (406) +....|++++||+.+||++||+++||+.++.+++++||+|++++++ ..|+|++|+|++|+.|++..+..+.+ .. T Consensus 81 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~ 159 (432) T protein:vir:10 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD-RKGKVQALWPIDASKVTVYIDDVGLLNSKTKM 159 (432) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEEcCceeEEEEcCcccccccceE Confidence 3457899999999999999999999999999999999999999998 55899999999999999988765432 23 Q ss_pred EEEeecCCeEEEEcceeeEeecc-CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHH Q lcl|Aclame:pro 140 TFTDMLTAKQVKCFAHDVIHWKF-FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQR 218 (406) Q Consensus 140 ~~~~~~~g~~~~~~~~~vih~r~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~ 218 (406) ++....+|..+.|++++|||+|+ ++.++++|+||+..+..+|..+.++.++..++|+||+.|+++++.++.+++++.++ T Consensus 160 ~y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~~ 239 (432) T protein:vir:10 160 WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 239 (432) T ss_pred EEEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHH Confidence 44556778888999999999996 57889999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHH Q lcl|Aclame:pro 219 ARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYV 295 (406) Q Consensus 219 ~~~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~ 295 (406) ++++|++.++| .++++++++++|++|+++++++.|+||++.+++++++||++|||||.+||. .++++|++++.+.|+ T Consensus 240 ~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~~~ 319 (432) T protein:vir:10 240 FRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 319 (432) T ss_pred HHHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHH Confidence 99999999988 678999999999999999999999999999999999999999999999985 567899999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccCccchh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCe Q lcl|Aclame:pro 296 TNDLPFYFDAITSELGLKTLNDKDRR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDR 370 (406) Q Consensus 296 ~~~i~P~~~~ie~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~ 370 (406) +++|.|++++||++||++|++..++. .++++|+. +.|.+++++++.+++++|++|+||+|+++|+||+ |+||+ T Consensus 320 ~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi--~ggD~ 397 (432) T protein:vir:10 320 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE--AGGDR 397 (432) T ss_pred HHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCe Confidence 99999999999999999999887653 45667764 4578899999999999999999999999999999 67999 Q ss_pred eeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 371 YQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 371 ~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) +++|+|++|++...+.+.. +..++++.+.+++++ T Consensus 398 ~~~~~n~~~~~~~~~~~~k--~~~~~~~~~~~~~~~ 431 (432) T protein:vir:10 398 LLVNGNMLPIDMAGQAYLK--GGDTNGEVSKEGNEG 431 (432) T ss_pred EeecccccchhhccccccC--CCCCCCCCCCCCCCC Confidence 9999999999876643221 111222222333333 No 20 >protein:vir:107605 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338186;genbank:gi:77020175;genbank:GeneID:3703736 Probab=100.00 E-value=6e-93 Score=526.17 Aligned_cols=401 Identities=17% Similarity=0.220 Sum_probs=341.4 Q ss_pred Cccccccc------CCC-------CcchhhHHHhhcCC-cccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC-- Q lcl|Aclame:pro 1 MSFFQPLG------TSK-------VSYDDYISSVLAGD-VSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG-- 64 (406) Q Consensus 1 M~~f~~~~------~~~-------~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~-- 64 (406) ||||+++. ++. ......+..+++++ .+..++..+|+++++||+||++||++||++|+++++.++ T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 80 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhCCCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 99876531 111 12334555666543 345788889999999999999999999999999997643 Q ss_pred -cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcce----EE Q lcl|Aclame:pro 65 -DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI----VY 139 (406) Q Consensus 65 -~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~----~~ 139 (406) +....|++++||+.+||++||+++||+.++.+++++||+|++++++ ..|+|++|+|++|+.|++..+..+.+ .. T Consensus 81 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~ 159 (432) T protein:vir:10 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFD-RKGKVQALWPIDASKVTVYIDDVGLLNSKTKM 159 (432) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEEcCceeEEEEcCcccccccceE Confidence 3457899999999999999999999999999999999999999998 55899999999999999988765432 23 Q ss_pred EEEeecCCeEEEEcceeeEeecc-CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHH Q lcl|Aclame:pro 140 TFTDMLTAKQVKCFAHDVIHWKF-FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQR 218 (406) Q Consensus 140 ~~~~~~~g~~~~~~~~~vih~r~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~ 218 (406) ++....+|..+.|++++|||+|+ ++.++++|+||+..+..+|..+.++.++..++|+||+.|+++++.++.+++++.++ T Consensus 160 ~y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~~ 239 (432) T protein:vir:10 160 WYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKV 239 (432) T ss_pred EEEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHH Confidence 44556778888999999999996 57889999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHH Q lcl|Aclame:pro 219 ARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYV 295 (406) Q Consensus 219 ~~~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~ 295 (406) ++++|++.++| .++++++++++|++|+++++++.|+||++.+++++++||++|||||.+||. .++++|++++.+.|+ T Consensus 240 ~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~~~ 319 (432) T protein:vir:10 240 FRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFY 319 (432) T ss_pred HHHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHH Confidence 99999999988 678999999999999999999999999999999999999999999999985 567899999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccCccchh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCe Q lcl|Aclame:pro 296 TNDLPFYFDAITSELGLKTLNDKDRR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDR 370 (406) Q Consensus 296 ~~~i~P~~~~ie~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~ 370 (406) +++|.|++++||++||++|++..++. .++++|+. +.|.+++++++.+++++|++|+||+|+++|+||+ |+||+ T Consensus 320 ~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi--~ggD~ 397 (432) T protein:vir:10 320 TDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPE--AGGDR 397 (432) T ss_pred HHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCe Confidence 99999999999999999999887653 45667764 4578899999999999999999999999999999 67999 Q ss_pred eeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 371 YQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 371 ~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) +++|+|++|++...+.+.. +..++++.+.+++++ T Consensus 398 ~~~~~n~~~~~~~~~~~~k--~~~~~~~~~~~~~~~ 431 (432) T protein:vir:10 398 LLVNGNMLPIDMAGQAYLK--GGDTNGEVSKEGNEG 431 (432) T ss_pred EeecccccchhhccccccC--CCCCCCCCCCCCCCC Confidence 9999999999876643221 111222222333333 No 21 >protein:vir:10362 Length: 432 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858954;genbank:gi:32128419;genbank:GeneID:2648396 Probab=100.00 E-value=3.4e-93 Score=527.52 Aligned_cols=398 Identities=15% Similarity=0.193 Sum_probs=335.3 Q ss_pred CcccccccC---CCC-----------cchhhH--HHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC Q lcl|Aclame:pro 1 MSFFQPLGT---SKV-----------SYDDYI--SSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG 64 (406) Q Consensus 1 M~~f~~~~~---~~~-----------~~~~~~--~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 64 (406) ||+|.+.++ .+. +..... ........+..+++.+||++++||+||++||++||+|||++|++++ T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~v~~~~al~~~~V~~~i~~Ia~~ia~lp~~~y~~~~ 86 (432) T protein:vir:10 7 LGLLGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAIAAMPLTMYMRTP 86 (432) T ss_pred cchhhhhHhhcCCccccccccccccccCcchhhhhcccccccCcccchhhhhcchHHHHHHHHHHHhhhhCceeEEEecC Confidence 999966322 111 111111 1122233567789999999999999999999999999999997643 Q ss_pred ---cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEE Q lcl|Aclame:pro 65 ---DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTF 141 (406) Q Consensus 65 ---~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~ 141 (406) .....|+++++|+.+||++||+++||+.++.+++++||||++++++ +|++.+|+|++|+.|++..+.+|.+.|.+ T Consensus 87 ~g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~--~g~~~~L~~l~~~~v~v~~~~~g~~~y~~ 164 (432) T protein:vir:10 87 DGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT--DGRIESLQYLANDRLTITTDTKGNTAYRY 164 (432) T ss_pred CCcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec--CCcEEEEEEEcCCceEEEEcCCCcEEEEE Confidence 3456799999999999999999999999999999999999999985 48999999999999999999889887766 Q ss_pred EeecCCeEEEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHH Q lcl|Aclame:pro 142 TDMLTAKQVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQ 221 (406) Q Consensus 142 ~~~~~g~~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~ 221 (406) . ..+|..+.+++++|+|+|+++.++++|+||+..+..+|..+.++.++..++|+||++|+++++.++.+++|+++++++ T Consensus 165 ~-~~~g~~~~~~~~~iih~~~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~~~ 243 (432) T protein:vir:10 165 R-RTDGQMIDIPKQQIWKIMGYSLDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDDQYDSFAK 243 (432) T ss_pred E-ecCceEEEEcCccEEEecCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCCCCHHHHHHHHH Confidence 5 457888999999999999999999999999999999999999999999999999999999999999999999999888 Q ss_pred HHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc-----cchhHHHHHHHHHH Q lcl|Aclame:pro 222 EFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS-----PNQSVAQLMEDYVT 296 (406) Q Consensus 222 ~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~-----~~~n~~~~~~~~~~ 296 (406) +|.. +.++|++++|++|++|++++++++|+||+|++++++++||++|||||++||... +++|+|++++.|++ T Consensus 244 ~~~~---~~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~~~~~t~~~~sn~e~~~~~f~~ 320 (432) T protein:vir:10 244 KVSG---SVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQLGFLS 320 (432) T ss_pred HHhh---hhhCCCceecCCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCcccccchHHHHHHHHHH Confidence 8753 357789999999999999999999999999999999999999999999998632 35789999999999 Q ss_pred HHHHHHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeee Q lcl|Aclame:pro 297 NDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQ 372 (406) Q Consensus 297 ~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~ 372 (406) +||.||+++||++|+++|++..++..++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+++ +++.++ T Consensus 321 ~tl~P~~~~ie~~ln~kL~~~~~~~~~~~~fd~~~ll~~d~~~r~~~~~~~~~~G~~T~NE~R~~~glppi~g-~~~~~~ 399 (432) T protein:vir:10 321 MTLSPWLRRIEQSIALNLLSPAERRRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGG-NAAVLT 399 (432) T ss_pred HHHHHHHHHHHHHHHhhhcCccccCceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCC-CcceEe Confidence 999999999999999999998887777888875 567889999999999999999999999999999963 456777 Q ss_pred eccCccchhhccccccccCcccCCCccCCCCCC Q lcl|Aclame:pro 373 SSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 373 ~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~ 405 (406) ++.|++|++.......+......+++++++..+ T Consensus 400 ~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (432) T protein:vir:10 400 VQSAMVPLDSIGLQASPEPASGLGNQQQDKVSK 432 (432) T ss_pred ecCcccchhhhcccCCCCCCCCCCCcccccccC Confidence 999999998765433222222222222222222 No 22 >protein:vir:97060 Length: 432 # NCBI annotation: putative head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453563;genbank:gi:84662598;genbank:GeneID:5142475 Probab=100.00 E-value=8.4e-93 Score=525.37 Aligned_cols=398 Identities=15% Similarity=0.192 Sum_probs=333.8 Q ss_pred CcccccccC---CCC----------cchhhHH---HhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC Q lcl|Aclame:pro 1 MSFFQPLGT---SKV----------SYDDYIS---SVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG 64 (406) Q Consensus 1 M~~f~~~~~---~~~----------~~~~~~~---~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 64 (406) ||||.+.++ .+. +...... .......+..+++.+||++++||+||++||++||+||+++|+.+. T Consensus 7 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~a~~~~aV~~~v~~Ia~~ia~lp~~~y~~~~ 86 (432) T protein:vir:97 7 LGLLGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAVAAMPLMMYMRTP 86 (432) T ss_pred CchhhhhHhhcCCccccccccccccccCchhhhhhcccccccCcccchHhhhcchHHHHHHHHHHHhhccCceEEEEecC Confidence 999976332 111 1111111 112223456789999999999999999999999999999997643 Q ss_pred ---cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEE Q lcl|Aclame:pro 65 ---DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTF 141 (406) Q Consensus 65 ---~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~ 141 (406) .....|+++++|+.+||++||+++||+.++.+++++||||++++++ +|++.+|||++|+.|++..+.+|.++|.+ T Consensus 87 ~g~~~~~~~pl~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~--~g~~~~L~~l~p~~v~v~~~~~g~~~y~~ 164 (432) T protein:vir:97 87 DGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT--DGRIESLQYLANDRLTITTDTKGNTAYRY 164 (432) T ss_pred CCcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec--CCcEEEEEEEcCcceEEEEcCCCcEEEEE Confidence 3556799999999999999999999999999999999999999986 48999999999999999999889887766 Q ss_pred EeecCCeEEEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHH Q lcl|Aclame:pro 142 TDMLTAKQVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQ 221 (406) Q Consensus 142 ~~~~~g~~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~ 221 (406) . ..+|..+.+++++|+|+|+++.++++|+||+..++..|..+.++.++..++|+||++|++++..++.+++++++++++ T Consensus 165 ~-~~~g~~~~~~~~~iih~r~~~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~~~ 243 (432) T protein:vir:97 165 R-RTDGQMIDIPRQQIWKIMGYSLDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDDQYDSFSK 243 (432) T ss_pred E-ecCceEEEEccccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeEecCCCCCHHHHHHHHH Confidence 5 457888899999999999999999999999999999999999999999999999999999999999999999888877 Q ss_pred HHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc-----cchhHHHHHHHHHH Q lcl|Aclame:pro 222 EFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS-----PNQSVAQLMEDYVT 296 (406) Q Consensus 222 ~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~-----~~~n~~~~~~~~~~ 296 (406) +|.. ..++|++++|++|++|+++++++.|+||+|++++++++||++|||||++||... +++|+|++.+.|++ T Consensus 244 ~~~~---~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~~s~~e~~~~~f~~ 320 (432) T protein:vir:97 244 KVSG---SVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQLGFLT 320 (432) T ss_pred HHhh---hhcCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCcccccchhHHHHHHHHHH Confidence 7753 257789999999999999999999999999999999999999999999998632 34789999999999 Q ss_pred HHHHHHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeee Q lcl|Aclame:pro 297 NDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQ 372 (406) Q Consensus 297 ~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~ 372 (406) +||.||++.||++|+++|+++.++..++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||++ ++++.++ T Consensus 321 ~tl~P~~~~ie~~ln~kLl~~~e~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~glpp~~-g~~~~~~ 399 (432) T protein:vir:97 321 MTLSPWLRRIEQSIALNLLTPAERRRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLG-GNAAVLT 399 (432) T ss_pred HHHHHHHHHHHHHHhhhccCccccCceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCC-CCcceEe Confidence 999999999999999999998887777888875 45778999999999999999999999999999995 3456677 Q ss_pred eccCccchhhccccccccCcccCCCccCCCCCC Q lcl|Aclame:pro 373 SSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 373 ~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~ 405 (406) ++.|++|++.......+......+++++++..+ T Consensus 400 ~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (432) T protein:vir:97 400 VQSAMVPLDSIGLQASPEPASGLGNQQQDKVSK 432 (432) T ss_pred ecccccchhhhcccCCCCCCCCCCCcccccccC Confidence 999999998776432222211111111222222 No 23 >protein:vir:102118 Length: 409 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699943;genbank:gi:110804051;genbank:GeneID:4206661 Probab=100.00 E-value=2.5e-92 Score=522.77 Aligned_cols=390 Identities=17% Similarity=0.218 Sum_probs=341.1 Q ss_pred CcccccccCCCC--c-chhhHHHhhcCCc-ccccchhhhhccHHHHHHHHHHHHhhccceeEEEecC--CcccccchHHH Q lcl|Aclame:pro 1 MSFFQPLGTSKV--S-YDDYISSVLAGDV-SQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVN--GDIIHDEDINY 74 (406) Q Consensus 1 M~~f~~~~~~~~--~-~~~~~~~~~~~~~-~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~--~~~~~~~~~~~ 74 (406) |-|.++++.+.. + .+..+..+++.+. +.+++..+||++++|++||++||++||+||+++|+.+ ++....|++.+ T Consensus 1 m~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~~~~~~~~l~~ 80 (409) T protein:vir:10 1 MLFRKGFKNQSQEISIDDKKILEWLGINPSETYVNGKSCLKQATVFGCIRILSDNISKLPIKIYQKKDGIKRVPDHYLEY 80 (409) T ss_pred CcccccccCcCCCCCCChHHHHHHhcCCcCcceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCeeeccCchHHH Confidence 887665544332 2 3344566665443 4578889999999999999999999999999998753 34566789999 Q ss_pred HhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcce-----EEEEEeecCCeE Q lcl|Aclame:pro 75 LLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI-----VYTFTDMLTAKQ 149 (406) Q Consensus 75 lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~-----~~~~~~~~~g~~ 149 (406) +|+.+||++||+++||+.++.+++++||+|++++++ ..|++++|+|++|+.|++..+.+|.. +.+......|.. T Consensus 81 lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~-~~G~~~~L~~i~~~~V~v~~~~~~~~~~~~~~~y~~~~~~g~~ 159 (409) T protein:vir:10 81 LLKLRPNPYMSSSDFWKCIEVQRNIYGNAYVALDFK-KNGEIKGLYPLKSDGMKIFVDDTGLLNSENNVWYLYTDDLGQR 159 (409) T ss_pred HHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEc-CCCcEEEEEEEcCCceEEEEcCCccccccceEEEEEEeCCcee Confidence 999999999999999999999999999999999998 55899999999999999988766532 223344567788 Q ss_pred EEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 150 VKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG 229 (406) Q Consensus 150 ~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g 229 (406) +.+++++|||+|+++.++++|+||+..+..++..+.++.+++.++|+||++|+++++.++.+++++.+++++.|++.++| T Consensus 160 ~~~~~~evih~r~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~~~~~~~~~~g 239 (409) T protein:vir:10 160 HKFMSDEILHFKGLTADGLAGLSVIELLNHLIENGKSSETYLNNFFKNGLQVKGLVQYAGDLNPEAEEVFKENFERMSSG 239 (409) T ss_pred EEeccccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCHHHHHHHHHHHHHHhcc Confidence 89999999999998889999999999999999999999999999999999999999999999999999999999999988 Q ss_pred -cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 -SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYFDAI 306 (406) Q Consensus 230 -~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~~~i 306 (406) .++++++++++|++|++++.++.|+|++|.+++++++||++|||||.+||. .++++|++++.+.|+++||.|++++| T Consensus 240 ~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~e~~~~~f~~~~l~P~~~~i 319 (409) T protein:vir:10 240 LKNAHRIAMLPIGYKFEPISQKLVDAQFLENSQLTIRQIASVFGVKMHQLNDLDRATHSNITEQNREFYIDTLQSILNMY 319 (409) T ss_pred ccccCCceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCccccHHHHHHHHHHHHHHHHHHHH Confidence 568889999999999999999999999999999999999999999999986 45789999999999999999999999 Q ss_pred HHHHHhhccCccch-hhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchh Q lcl|Aclame:pro 307 TSELGLKTLNDKDR-RLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLD 381 (406) Q Consensus 307 e~~l~~~l~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~ 381 (406) |++|+++|++..+. ..++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ ||||++++|+|++|++ T Consensus 320 e~~ln~kL~~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~lgl~p~--~ggD~~~~~~n~~~~~ 397 (409) T protein:vir:10 320 ELEINYKLFLISEIKNGFYSKFNVDTILRADIKTRYESYKEAIQNGFKTPNEIRELEEDEPL--EGGDVLLINGNMIPVK 397 (409) T ss_pred HHHHHHhhcCchhccCCcEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcCeeeeccCccchh Confidence 99999999987764 346677775 4578889999999999999999999999999999 6799999999999998 Q ss_pred hccccccccCcccCCCcc Q lcl|Aclame:pro 382 KKEEYQDKVGIKGKGGEV 399 (406) Q Consensus 382 ~~~~~~~~~~~~~~gg~~ 399 (406) ...+ +..+|||. T Consensus 398 ~~~~------~~~kgGe~ 409 (409) T protein:vir:10 398 MAGE------QYSKGGEK 409 (409) T ss_pred hccc------cccccCCC Confidence 6542 33466766 No 24 >protein:vir:5737 Length: 419 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:122 # MgeName: PY54 # Cross-refs: genbank:acc:NP_892048;genbank:gi:33770511;goa:Q7Y412;interpro:IPR006427;interpro:IPR006944;uniprot:Q7Y412;genbank:GeneID:1732929;interpro:IPR010994 Probab=100.00 E-value=2.2e-92 Score=523.08 Aligned_cols=398 Identities=18% Similarity=0.148 Sum_probs=338.1 Q ss_pred CcccccccCCCCc-chhh--H-HHhh--cCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc----ccccc Q lcl|Aclame:pro 1 MSFFQPLGTSKVS-YDDY--I-SSVL--AGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD----IIHDE 70 (406) Q Consensus 1 M~~f~~~~~~~~~-~~~~--~-~~~~--~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~----~~~~~ 70 (406) |+||+++++++.. ...+ + ..+. ....+..+++.+||++++||+||++||++||+||+++|+.+++ ....| T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~g~~~~~~~~ 80 (419) T protein:vir:57 1 MFIPQFWKGRPSENRVNWQVVPGGMRSSSSQAGVIITPETALALSAVRACVTLLAESVAQLPCVLYRRTENGGREIAFDH 80 (419) T ss_pred CcchhhhccCCccccccccccccccccccccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEEcCCCceeccccc Confidence 9998876544322 1111 1 1211 1223456888999999999999999999999999999975432 44688 Q ss_pred hHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEE Q lcl|Aclame:pro 71 DINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQV 150 (406) Q Consensus 71 ~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~ 150 (406) ++.++|+.+||+++|+++||+.++.+++++||+|++|+++ ..|+|++|+|++|+.|++..+.+|.++|.+. .. .. T Consensus 81 ~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~-~~G~~~~L~pl~~~~v~v~~~~~g~~~y~~~--~~--~~ 155 (419) T protein:vir:57 81 PLHDLIRYQPNRKDTAFEYHEQTQGVLGLEGNSYSLIDRN-GRGDITELIPINPHKVIVLKGPDGMPYYDIP--SI--GE 155 (419) T ss_pred hHHHHHhhccccCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEEcCcceEEEECCCceEEEEEc--CC--ce Confidence 9999999999999999999999999999999999999998 5589999999999999999988887665442 23 34 Q ss_pred EEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec----CCCCHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 KCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG----AQLSGDARQRARQEFEKM 226 (406) Q Consensus 151 ~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~----~~~~~e~~~~~~~~~~~~ 226 (406) .++.++|+|+|+++.++++|+||+..+..+|..+.++.+++.++|+||++|++++..+ +..++++++++++.|.+. T Consensus 156 ~~~~~~vih~r~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~e~~~~~~~~~~~~ 235 (419) T protein:vir:57 156 ILPMRMVHHIKSFSLDGYIGTSPIQTNPDVLGLGIAVEQHAAQVFARGTTMSGVIERPFEAKAIASQAAVDAILAKWTER 235 (419) T ss_pred EEchhhEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEecCcCCcccCHHHHHHHHHHHHHH Confidence 7899999999999999999999999999999999999999999999999999999874 456889999999999999 Q ss_pred hcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 227 REG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYF 303 (406) Q Consensus 227 ~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~ 303 (406) ++| .++|+++++++|++|++++.+++|+||+|++++++++||++|||||.+||. .++++|+|++.+.|+++||+|++ T Consensus 236 ~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~~~l~P~~ 315 (419) T protein:vir:57 236 YGGVRNAFSVGMLQEGMTYKQLSQDNEKAQLLQSRQYTVNEVCRLYKVPPHMIQDLQKSTNNNIEHQGLQYVIYTMLAIL 315 (419) T ss_pred hccccccccceecCCCceEEEcCCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCccccHHHHHHHHHHHHHHHHH Confidence 988 578899999999999999999999999999999999999999999999986 45789999999999999999999 Q ss_pred HHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccc Q lcl|Aclame:pro 304 DAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVF 379 (406) Q Consensus 304 ~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~ 379 (406) ++||++|+++|+++.++..++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++|+|+++ T Consensus 316 ~~ie~~l~~~ll~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~--~ggD~~~~~~n~~~ 393 (419) T protein:vir:57 316 KRHESAMMRDLLLPSERRDFYIEFNVSSLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLTPI--PGGDKYLTPLNMVD 393 (419) T ss_pred HHHHHHHHhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcCeeeecccccc Confidence 99999999999998887778888875 4578899999999999999999999999999999 67999999999998 Q ss_pred hhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 380 LDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 380 ~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) ++.....+.+..++.++.+. ....+| T Consensus 394 ~~~~~~~~~~~~~~~~~~~~-~~~~~~ 419 (419) T protein:vir:57 394 SKALTGIGKATPQQLKDIEA-ILCTRN 419 (419) T ss_pred ccccccccCCCcccCcchhh-hhhccC Confidence 87666544443333333331 111222 No 25 >protein:vir:1431 Length: 419 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536360;genbank:gi:17975165;genbank:GeneID:929165 Probab=100.00 E-value=7.5e-92 Score=520.16 Aligned_cols=393 Identities=18% Similarity=0.171 Sum_probs=340.7 Q ss_pred CcccccccC----CCCcchhhHHHhhcCCc---ccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC---cccccc Q lcl|Aclame:pro 1 MSFFQPLGT----SKVSYDDYISSVLAGDV---SQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG---DIIHDE 70 (406) Q Consensus 1 M~~f~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~---~~~~~~ 70 (406) |=|.++..+ ...+..+|+..++++.. +..++..+||++++||+||++||++||++|+++|+.++ .....| T Consensus 1 ~~~~r~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~vt~~~al~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~~~~~~~~ 80 (419) T protein:vir:14 1 MFFSRQLLSNLGQTQMSAGGWVSALLGSSRSDSGQVVTPASALALTVLQNCVTLLAESIAQLPIELYERSGEDRKPATDH 80 (419) T ss_pred CcccccccccccccccCcchhhHHhhcCCCccCCcccchHHhhccHHHHHHHHHHHHhhccCceEEEEecCCcccccccc Confidence 644333222 23455567776665443 45689999999999999999999999999999997643 355689 Q ss_pred hHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEE Q lcl|Aclame:pro 71 DINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQV 150 (406) Q Consensus 71 ~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~ 150 (406) +++++|+.+||++||+++||+.++.+++++||+|++++++. +|+|+++||++|+.|++..+.++.++|.+... . T Consensus 81 ~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~-~G~~~~l~pl~~~~v~v~~~~~~~~~y~~~~~-----~ 154 (419) T protein:vir:14 81 PLYSILKYEPNSWQTPFEYQEQSQVAVGLRGNSYSFIDRDS-DGVIQGLYPLDNEAVTVMRGSDLKPVYRVRGS-----D 154 (419) T ss_pred HHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECC-CCcEEEEEEecCceEEEEECCCceEEEEEccC-----c Confidence 99999999999999999999999999999999999999984 58999999999999999998888877665422 2 Q ss_pred EEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCC----CHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 KCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQL----SGDARQRARQEFEKM 226 (406) Q Consensus 151 ~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~----~~e~~~~~~~~~~~~ 226 (406) .++.++|+|+|+++.++++|+||+..+..+|..+.++.++..++|+||+.|+++++.+... ++++.+++++.|++. T Consensus 155 ~~~~~~i~h~~~~~~dg~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (419) T protein:vir:14 155 PMPQRLVHHVRWMSINGYTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPKDAPALKDQASVDRITDGWNAK 234 (419) T ss_pred ccchhheeEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCcccCHHHHHHHHHHHHHH Confidence 4789999999999999999999999999999999999999999999999999999987655 588999999999999 Q ss_pred hcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 227 REG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYF 303 (406) Q Consensus 227 ~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~ 303 (406) ++| .++++++++++|++|++++.++.|+||+|++++++++||++|||||.+||. .++++|+|++++.|+++||.|++ T Consensus 235 ~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~t~s~~E~~~~~f~~~~L~P~~ 314 (419) T protein:vir:14 235 FGGSGNAKKVALLQEGMTFRPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELERATFSNIEHQSLQFVIYTLLPWV 314 (419) T ss_pred hcCccccCCceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCCCCcccHHHHHHHHHHHHHHHHH Confidence 998 577899999999999999999999999999999999999999999999986 46789999999999999999999 Q ss_pred HHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccc Q lcl|Aclame:pro 304 DAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVF 379 (406) Q Consensus 304 ~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~ 379 (406) ++||++|+++|+++.++..++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++|+|+++ T Consensus 315 ~~ie~~l~~kll~~~~~~~~~i~fd~~~l~r~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~--~gGD~~~~~~n~~~ 392 (419) T protein:vir:14 315 KRHEQAKTRDLLLPSERKQYFIEYNLAGLLRGDQSSRYAAYAVGRQWGWLSINDIRRLENMPPV--KGGDIYLSPMNMVD 392 (419) T ss_pred HHHHHHHhhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcCeeeecccccc Confidence 99999999999998887777888875 4578899999999999999999999999999999 67999999999998 Q ss_pred hhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 380 LDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 380 ~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) ++.....+.. +.++.++..+++ T Consensus 393 ~~~~~~~~~~-----~~~~~~~~~~e~ 414 (419) T protein:vir:14 393 ASKPQQLPVG-----KSEPTKAAIDEI 414 (419) T ss_pred ccccccccCC-----CCCCccccccch Confidence 8765432222 223344555555 No 26 >protein:vir:189 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037699;genbank:gi:9634156;genbank:GeneID:1262529 Probab=100.00 E-value=6e-92 Score=520.71 Aligned_cols=388 Identities=15% Similarity=0.207 Sum_probs=328.3 Q ss_pred Cccccccc----CC-CCcchh--hHHHhhc--CCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc-----c Q lcl|Aclame:pro 1 MSFFQPLG----TS-KVSYDD--YISSVLA--GDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD-----I 66 (406) Q Consensus 1 M~~f~~~~----~~-~~~~~~--~~~~~~~--~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~-----~ 66 (406) =|||++++ .+ ..+... ....+.. ...+..+++.+|+++++||+||++||++||+||+++|+.+++ . T Consensus 14 ~g~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~cv~~Ia~~iA~lp~~vy~~~~~~~~~~~ 93 (424) T protein:vir:18 14 NGWWARLKSWFVGGRLVTPNQGSQTGPVSAHGYLGDSSINDERILQISTVWRCVSLISTLTACLPLDVFETDQNDNRKKV 93 (424) T ss_pred CchHHHHHhhccccccccccchhhccccccccccccccccHHHhhccHHHHHHHHHHHHhhccCceEEEEeccCCceeee Confidence 23443322 11 111111 1111111 112355888999999999999999999999999999985432 2 Q ss_pred cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecC Q lcl|Aclame:pro 67 IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLT 146 (406) Q Consensus 67 ~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~ 146 (406) ...|+++++|+.+||++||+++||+.++.+++++||+|++++|+ ..|++++|+|++|..|++..+ .+.++|.+ ..+ T Consensus 94 ~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~G~~~~L~~l~~~~v~v~~~-~~~~~y~~--~~~ 169 (424) T protein:vir:18 94 DLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRN-SAGDVISLLPLQSANMDVKLV-GKKVVYRY--QRD 169 (424) T ss_pred ccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEecCcceEEEEc-CCeEEEEE--EeC Confidence 35799999999999999999999999999999999999999997 558999999999999998764 45565554 356 Q ss_pred CeEEEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCC-CCHHHHHHHHHHHHH Q lcl|Aclame:pro 147 AKQVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQ-LSGDARQRARQEFEK 225 (406) Q Consensus 147 g~~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~-~~~e~~~~~~~~~~~ 225 (406) |..+.|++++|||+|+++.++++|+||+..++.+|..+.+++++..++|+||+.|+++++.+.. +++++++++++.|++ T Consensus 170 g~~~~~~~~eVihir~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e~~~~~~~~~~~ 249 (424) T protein:vir:18 170 SEYADFSQKEIFHLKGFGFTGLVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQRSQVEENFKE 249 (424) T ss_pred CeEEEeccccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCcCCCHHHHHHHHHHHHH Confidence 7788999999999999888999999999999999999999999999999999999999998765 799999999999999 Q ss_pred HhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc----cchhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 226 MREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS----PNQSVAQLMEDYVTNDLPF 301 (406) Q Consensus 226 ~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~----~~~n~~~~~~~~~~~~i~P 301 (406) .++|.+++++++|++|++|+++++++.|+||+|++++++++||++|||||++||... .++|++++...|+++||.| T Consensus 250 ~~~~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq~~~~f~~~tl~P 329 (424) T protein:vir:18 250 IAGGPVKKRLWILEAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQQNLGFLQYTLQP 329 (424) T ss_pred HhCCcccCCceeccCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCCCCcccccccHHHHHHHHHHHHHHH Confidence 998888999999999999999999999999999999999999999999999998632 3478999999999999999 Q ss_pred HHHHHHHHHHhhccCccchhhhhhhhccc----chhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCc Q lcl|Aclame:pro 302 YFDAITSELGLKTLNDKDRRLYHIEFDTR----SVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNY 377 (406) Q Consensus 302 ~~~~ie~~l~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~ 377 (406) ++++||++|+++|++..++..++++|+++ .|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++++|+ T Consensus 330 ~~~~ie~~ln~~L~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi--~ggD~~~~~~n~ 407 (424) T protein:vir:18 330 YISRWENSIQRWLIPSKDVGRLHAEHNLDGLLRGDSASRAAFMKAMGESGLRTINEMRRTDNMPPL--PGGDVAMRQAQY 407 (424) T ss_pred HHHHHHHHHHhhcCCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcCeeeeccCc Confidence 99999999999999988877778888754 578899999999999999999999999999999 669999999999 Q ss_pred cchhhccccccccCcccCCCc Q lcl|Aclame:pro 378 VFLDKKEEYQDKVGIKGKGGE 398 (406) Q Consensus 378 ~~~~~~~~~~~~~~~~~~gg~ 398 (406) +|++.......+. .+|. T Consensus 408 ~~l~~~~~~~~~~----~n~a 424 (424) T protein:vir:18 408 VPITDLGTNKEPR----NNGA 424 (424) T ss_pred cchhhhhccCCcc----ccCC Confidence 9998654322111 1111 No 27 >protein:vir:1266 Length: 416 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690758;genbank:gi:22854998;genbank:GeneID:955213 Probab=100.00 E-value=1.9e-91 Score=517.92 Aligned_cols=396 Identities=22% Similarity=0.335 Sum_probs=343.6 Q ss_pred Ccc---cccccCCC---CcchhhHHHhhcCCc---ccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC---cccc Q lcl|Aclame:pro 1 MSF---FQPLGTSK---VSYDDYISSVLAGDV---SQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG---DIIH 68 (406) Q Consensus 1 M~~---f~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~---~~~~ 68 (406) |=| |+++.... ....+.+..++++.. +..++...++++++||+||++||++||+||+++|+.++ +... T Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~Ia~~ia~l~~~~~~~~~~~~~~~~ 80 (416) T protein:vir:12 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) T ss_pred CccchhcccccCccccCccchhHHHHhhcCcccccCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCcccccc Confidence 633 44443222 223445666666544 35678889999999999999999999999999997543 2446 Q ss_pred cchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCe Q lcl|Aclame:pro 69 DEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAK 148 (406) Q Consensus 69 ~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~ 148 (406) .|+++++|+.+||++||+++||+.++.+++++||+|+++.++ ..|+|.+|||++|+.|++..+.++...++ ....+|. T Consensus 81 ~~~l~~~l~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~-~~G~~~~L~~l~~~~v~v~~~~~~~~~~~-~~~~~g~ 158 (416) T protein:vir:12 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG-SHGYPEALFPLRPDYTNAYVHPTTGMLWY-QTVLNGK 158 (416) T ss_pred ccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEECCcceEEEEeCCCcEEEE-EEecCCe Confidence 689999999999999999999999999999999999999998 45899999999999999988776655443 3356778 Q ss_pred EEEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 149 QVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMRE 228 (406) Q Consensus 149 ~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 228 (406) .+.+++++|+|+|+++.++++|+||+.++..++..+.++.++..++|+||+.|+++++.++.++++++++++++|+.... T Consensus 159 ~~~~~~~eiih~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~e~~~~~~~~~~~~~~ 238 (416) T protein:vir:12 159 AIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNK 238 (416) T ss_pred EEEecCccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecCCCCCHHHHHHHHHHHHHHhc Confidence 88999999999999888999999999999999999999999999999999999999999999999999999999997754 Q ss_pred ccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 229 GSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYFDAI 306 (406) Q Consensus 229 g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~~~i 306 (406) +++++++++|++|+++++++.|+||+|.+++++++||++|||||++||. .++++|.+++.+.|+++||.|++++| T Consensus 239 ---~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~~~l~P~~~~i 315 (416) T protein:vir:12 239 ---VENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNF 315 (416) T ss_pred ---CCCeeecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCccCCCcccHHHHHHHHHHHHHHHHHHHH Confidence 4779999999999999999999999999999999999999999999985 45789999999999999999999999 Q ss_pred HHHHHhhccCccchh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchh Q lcl|Aclame:pro 307 TSELGLKTLNDKDRR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLD 381 (406) Q Consensus 307 e~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~ 381 (406) |++|+++|++..++. .++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++|+|++|++ T Consensus 316 e~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~Pi--~ggd~~~~~~n~~~~~ 393 (416) T protein:vir:12 316 EQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPI--ENGDKYISSLNYVFLD 393 (416) T ss_pred HHHHHHhhcCchhhcCCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcceeeecccccccc Confidence 999999999887653 46677765 4578899999999999999999999999999999 6699999999999999 Q ss_pred hccccccccC-cccCCCccCCCC Q lcl|Aclame:pro 382 KKEEYQDKVG-IKGKGGEVNAEE 403 (406) Q Consensus 382 ~~~~~~~~~~-~~~~gg~~~~~~ 403 (406) ...+++.... ...+|||+++++ T Consensus 394 ~~~~~~~~~~~~~~~gge~~~~g 416 (416) T protein:vir:12 394 FLEEYQRLKAGGAMKGGDNKNEG 416 (416) T ss_pred ccchhhccccccccCCCCCcCCC Confidence 8877665443 456788866666 No 28 >protein:vir:1884 Length: 424 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037664;genbank:gi:9634122;genbank:GeneID:1262519 Probab=100.00 E-value=1.4e-91 Score=518.74 Aligned_cols=387 Identities=15% Similarity=0.210 Sum_probs=329.1 Q ss_pred CcccccccC-----CCC-c----chhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc----- Q lcl|Aclame:pro 1 MSFFQPLGT-----SKV-S----YDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD----- 65 (406) Q Consensus 1 M~~f~~~~~-----~~~-~----~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~----- 65 (406) =|||+++++ +.. + ....+ .......+..+++..|+++++||+||++||++||+||+++|+.+++ T Consensus 14 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~al~~~~v~~cv~~Ia~~iA~lp~~~~~~~~~~~~~~ 92 (424) T protein:vir:18 14 NGWWARLQSWFVGGRLVTPNQGSQTGPV-SAHGHLGDSSINDERILQISTVWRCVSLISTLTACLPLDVFETDQNDNRKK 92 (424) T ss_pred CchHHHHHhhhccccccccccccccccc-ccccccccccccHHHhhccHHHHHHHHHHHHhhccCceEEEEeecCCceee Confidence 345544321 111 1 11111 1111223456899999999999999999999999999999975432 Q ss_pred ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeec Q lcl|Aclame:pro 66 IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDML 145 (406) Q Consensus 66 ~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~ 145 (406) ....|+++++|+.+||++||+++||+.++.+++++||+|++++++ ..|++++|+|++|+.|++..+ .+.++|.+ .. T Consensus 93 ~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~G~~~~L~pl~~~~V~v~~~-~~~~~y~~--~~ 168 (424) T protein:vir:18 93 VDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRN-SAGDVISLLPLQSANMDVKLV-GKKVVYRY--QR 168 (424) T ss_pred eccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEecCcceEEEEc-CCeEEEEE--Ee Confidence 235799999999999999999999999999999999999999998 458999999999999998765 45565554 45 Q ss_pred CCeEEEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCC-CCHHHHHHHHHHHH Q lcl|Aclame:pro 146 TAKQVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQ-LSGDARQRARQEFE 224 (406) Q Consensus 146 ~g~~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~-~~~e~~~~~~~~~~ 224 (406) +|..+.|++++|||+|+++.++++|+||+..++.+|..+.+++++..++|+||+.|++++..+.. +++++++++++.|+ T Consensus 169 ~g~~~~~~~~eIih~r~~~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~~~~~~ 248 (424) T protein:vir:18 169 DSEYADFSQKEIFHLKGFGFTGLVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQRSQVEENFK 248 (424) T ss_pred CCeEEEeccccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCcCCCHHHHHHHHHHHH Confidence 67788999999999999888999999999999999999999999999999999999999988764 79999999999999 Q ss_pred HHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc----cchhHHHHHHHHHHHHHH Q lcl|Aclame:pro 225 KMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS----PNQSVAQLMEDYVTNDLP 300 (406) Q Consensus 225 ~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~----~~~n~~~~~~~~~~~~i~ 300 (406) +.++|.+++++++|++|++|+++++++.|+||+|++++++++||++|||||.+||... .++|++++.+.|+++||. T Consensus 249 ~~~~g~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq~~~~f~~~tl~ 328 (424) T protein:vir:18 249 EIAGGPVKKRLWILEAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQQNLGFLQYTLQ 328 (424) T ss_pred HHhCCcccCCceeccCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccccHHHHHHHHHHHHHH Confidence 9999888999999999999999999999999999999999999999999999998632 348899999999999999 Q ss_pred HHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccC Q lcl|Aclame:pro 301 FYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLN 376 (406) Q Consensus 301 P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n 376 (406) ||+++||++|+++|++..++..++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++++| T Consensus 329 P~~~~ie~~l~~~L~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi--~gGD~~~~~~n 406 (424) T protein:vir:18 329 PYISRWENSIQRWLIPAKDVGRIHAEHNLDGLLRGDSASRAAFMKAMGEAGLRTINEMRRTDNLPPL--PGGDVAMRQSQ 406 (424) T ss_pred HHHHHHHHHHHhhcCCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcCeeeeccC Confidence 99999999999999998887777788875 5678899999999999999999999999999999 67999999999 Q ss_pred ccchhhccccccccCcccCCCc Q lcl|Aclame:pro 377 YVFLDKKEEYQDKVGIKGKGGE 398 (406) Q Consensus 377 ~~~~~~~~~~~~~~~~~~~gg~ 398 (406) ++|++.......+ ..+|. T Consensus 407 ~~~l~~~~~~~~p----~~~ga 424 (424) T protein:vir:18 407 YVPITDLGTNKEP----RNNGA 424 (424) T ss_pred ccchHhhhccCCC----ccCCC Confidence 9999865431111 11111 No 29 >protein:vir:4509 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599035;genbank:gi:19548993;genbank:GeneID:935206 Probab=100.00 E-value=1.8e-91 Score=518.13 Aligned_cols=390 Identities=13% Similarity=0.189 Sum_probs=326.9 Q ss_pred Cccccc----ccCC--CCcchhhHHHhh-cCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecC---Ccccccc Q lcl|Aclame:pro 1 MSFFQP----LGTS--KVSYDDYISSVL-AGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVN---GDIIHDE 70 (406) Q Consensus 1 M~~f~~----~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~---~~~~~~~ 70 (406) +.||++ +... ..+......... ....+..++..+||++++||+||++||++||++|+++|+.+ .+....| T Consensus 16 ~~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~vs~~~al~~~~v~~cv~~Ia~~iA~lp~~v~~~~~~~~~~~~~~ 95 (424) T protein:vir:45 16 RVLLDALFRSKSLENPSTPITGDAVDTDGLFRADVYVSPETAMKLAAVYSCIYVLSSSLAQMPLHVMRRHKGKVEPARDH 95 (424) T ss_pred hHHHHhhccccCCCCCccccchhhhhhhccccCCceechHHhhccHHHHHHHHHHHHHHhhCceEEEEecCCceeecccc Confidence 444433 3211 111222222222 12234678999999999999999999999999999999753 2345678 Q ss_pred hHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEE Q lcl|Aclame:pro 71 DINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQV 150 (406) Q Consensus 71 ~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~ 150 (406) +++++|+.+|||+||+++||+.++.+++++||+|++++++ ..|+|++|+|++|+.+++..+ .+.++|.+.. .+... T Consensus 96 ~l~~lL~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~-~~G~~~~L~~l~~~~v~i~~~-~~~~~y~~~~--~~~~~ 171 (424) T protein:vir:45 96 PAFYLVHDEPNTWQTSYKWRELKQRHILGWGNGYTWVKRN-RRGEVISLDCCMPWETTLMNT-GGRYTYGLYN--EYGAF 171 (424) T ss_pred hHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEEc-CCCcEEEEEEecCceEEEEEc-CCeEEEEEEe--cCceE Confidence 9999999999999999999999999999999999999998 458999999999999998654 4566665543 33456 Q ss_pred EEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc- Q lcl|Aclame:pro 151 KCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG- 229 (406) Q Consensus 151 ~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g- 229 (406) .+++++|||||+++.++++|+||+..++.+|..+.++.+++.++|+||++|++++..++.+++|+.+++++.|++.++| T Consensus 172 ~~~~~eVih~r~~~~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~~~~~~g~ 251 (424) T protein:vir:45 172 AISPDDMIHIRALGNNQKMGLSPIMQHAETIGMGMSGQKYTESFFSGNARPAGIVSVKSGLNKESWGWLKDQWQKASQAL 251 (424) T ss_pred EECcccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHHHHHHHHHhccc Confidence 7999999999998889999999999999999999999999999999999999999999999999999999999999987 Q ss_pred -cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 -SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYFDAI 306 (406) Q Consensus 230 -~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~~~i 306 (406) .++|+++++++|++|+++++++.|+||+|++++++++||++|||||.+||. .++++|++++.+.|+++||.||+++| T Consensus 252 ~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~eq~~~~f~~~tL~P~~~~i 331 (424) T protein:vir:45 252 RRQENKTMLLPADLDYKALTVSPVDAQIIDMMKLNRSMIAGIFNIPAHMINDLEKATFSNISAQAIQFVRYTMMPWVTNW 331 (424) T ss_pred cccCCceeEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHHHHHHH Confidence 478999999999999999999999999999999999999999999999996 46789999999999999999999999 Q ss_pred HHHHHhhccCccchh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchh Q lcl|Aclame:pro 307 TSELGLKTLNDKDRR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLD 381 (406) Q Consensus 307 e~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~ 381 (406) |++||++|++..++. .++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++|+|+++.. T Consensus 332 e~~ln~kLl~~~e~~~g~~i~fd~~~llr~d~~~r~~~~~~~~~~g~~T~NE~R~~~gl~pi--~ggD~~~~~~n~~~~~ 409 (424) T protein:vir:45 332 EQELNRRLFTRAELAAGYYVRFNLTGLLRGTPQERAQFYHFAITDGWMSRNEARAFEDMNPV--EGLDEMLVSVNAANPA 409 (424) T ss_pred HHHHHHhcCChhhhcCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcceeeecccccccc Confidence 999999999987654 46677775 4568899999999999999999999999999999 6799999999997643 Q ss_pred hccccccccCcccCCCccCC Q lcl|Aclame:pro 382 KKEEYQDKVGIKGKGGEVNA 401 (406) Q Consensus 382 ~~~~~~~~~~~~~~gg~~~~ 401 (406) .. .......+|++|+ T Consensus 410 ~~-----~~~~~~~~~~~~~ 424 (424) T protein:vir:45 410 GD-----FKPPKNDEGKTNE 424 (424) T ss_pred cc-----cCCCCCCCCCCCC Confidence 21 1111111122222 No 30 >protein:vir:2683 Length: 412 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:57 # MgeName: phiSLT # Cross-refs: genbank:acc:NP_075502;genbank:gi:12719431;genbank:GeneID:920150 Probab=100.00 E-value=2.5e-91 Score=517.34 Aligned_cols=390 Identities=18% Similarity=0.213 Sum_probs=333.4 Q ss_pred Ccccccc--cCC-CCc-chhh----------HHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcc Q lcl|Aclame:pro 1 MSFFQPL--GTS-KVS-YDDY----------ISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDI 66 (406) Q Consensus 1 M~~f~~~--~~~-~~~-~~~~----------~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 66 (406) |+||++- .++ ..+ ...+ +..+. +.....++..+++++|+||+||++||++||++||++++.++ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~a~~~~~v~~~i~~ia~~iA~lp~~~~~~~~-- 77 (412) T protein:vir:26 1 MNVIAKENIVTRIKKKLIDNWIDQSTSKLYDFSPWK-NRSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK-- 77 (412) T ss_pred CccchhhhhhhhhhhhHhhhhhcccccccccccccC-CccccccchhhhhccHHHHHHHHHHHHhHhhCceeEeeccc-- Confidence 9999651 111 000 0111 11111 12334578889999999999999999999999999998654 Q ss_pred cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecC Q lcl|Aclame:pro 67 IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLT 146 (406) Q Consensus 67 ~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~ 146 (406) ...|+++++|+.+||++||+++||+.++.+++++||+|++++|+ ..|++.+|+|++|+.|++..+.++...++.....+ T Consensus 78 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~G~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~ 156 (412) T protein:vir:26 78 VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERD-IYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAAT 156 (412) T ss_pred cccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCceEEEEEEC-CCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcCC Confidence 35788999999999999999999999999999999999999998 45899999999999999998877765555556677 Q ss_pred CeEEEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHH Q lcl|Aclame:pro 147 AKQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEK 225 (406) Q Consensus 147 g~~~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~ 225 (406) |..+.|++++|+|||++ +.++++|+||+.++..++.++.++.++. ++.++..+++++..+..+++++.++++++|++ T Consensus 157 g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~a~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~~~ 234 (412) T protein:vir:26 157 GNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQVLEDFKQ 234 (412) T ss_pred ceEEEEccccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecCCCCCHHHHHHHHHHHHH Confidence 88889999999999975 6788999999999999999999998884 56666677888889999999999999999999 Q ss_pred HhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 226 MREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYF 303 (406) Q Consensus 226 ~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~ 303 (406) .++ ++++++++++|++|+++++++.|+||+|++++++++||++|||||.+||. .++++|++++.+.|+++||.|++ T Consensus 235 ~~~--~~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~sn~e~~~~~f~~~~l~P~~ 312 (412) T protein:vir:26 235 YYE--ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPIV 312 (412) T ss_pred Hhh--cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHHHH Confidence 875 46789999999999999999999999999999999999999999999996 44789999999999999999999 Q ss_pred HHHHHHHHhhccCccchh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCcc Q lcl|Aclame:pro 304 DAITSELGLKTLNDKDRR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYV 378 (406) Q Consensus 304 ~~ie~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~ 378 (406) ++||++|+++|++..++. .++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++++|++ T Consensus 313 ~~ie~~ln~kLl~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~--~ggD~~~~~~n~~ 390 (412) T protein:vir:26 313 KQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPV--EGGDKPLISGDLY 390 (412) T ss_pred HHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcCeeeeccccc Confidence 999999999999987753 45677775 4578899999999999999999999999999999 6799999999999 Q ss_pred chhhccccccccCcccCCCccCCCCC Q lcl|Aclame:pro 379 FLDKKEEYQDKVGIKGKGGEVNAEED 404 (406) Q Consensus 379 ~~~~~~~~~~~~~~~~~gg~~~~~~~ 404 (406) |++.... .+...+|||+|+++. T Consensus 391 ~~~~~~~----~~~~~~gG~~n~~e~ 412 (412) T protein:vir:26 391 PIDTPLE----LRKSLKGGDKNVNES 412 (412) T ss_pred ccccchh----hcccccCCCCCcCCC Confidence 9986543 234568888888888 No 31 >protein:vir:6240 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:131 # MgeName: phi-BT1 # Cross-refs: genbank:acc:NP_813694;swissprot:trembl:q859c3;genbank:gi:29366754;interpro:IPR006427;interpro:IPR006944;uniprot:Q859C3;genbank:GeneID:1258894 Probab=100.00 E-value=4.2e-91 Score=516.05 Aligned_cols=404 Identities=15% Similarity=0.185 Sum_probs=328.2 Q ss_pred CcccccccCCCC----------cc---hhhHHHhhcC-CcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC-- Q lcl|Aclame:pro 1 MSFFQPLGTSKV----------SY---DDYISSVLAG-DVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG-- 64 (406) Q Consensus 1 M~~f~~~~~~~~----------~~---~~~~~~~~~~-~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~-- 64 (406) ||||+++.++.. ++ ...+..+... ..+..+++.+||++++||+||++||++||+||+++|+.++ T Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~ia~~iA~lp~~~~~~~~~~ 80 (457) T protein:vir:62 1 MGFWSALFGRGHSPALDAAEGRAWEPYDPSIYNLGATASSGERVTPHDALQVSAVFASVRLLSETIATLPLSTYSKRGGT 80 (457) T ss_pred CchhhhhhccccccccccccccccccchhhhhhccccccCCceechHHhhccHHHHHHHHHHHHhHhhCceEEEEecCCc Confidence 999975432211 11 1122222222 2345788999999999999999999999999999997643 Q ss_pred cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc----eEEE Q lcl|Aclame:pro 65 DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE----IVYT 140 (406) Q Consensus 65 ~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~----~~~~ 140 (406) .....++....|+.+||++||+++||+.++.+++++||+|++|.++ +|++.+|+|++|..|++..+..+. +++. T Consensus 81 ~~~~~~~~~~~ll~~pn~~~t~~~f~~~~~~~l~l~Gna~~~i~~~--~g~~~~l~~l~p~~v~v~~~~~~~~~~~~~~~ 158 (457) T protein:vir:62 81 RKEIDTPEWLDFPNAEPGGMGRIDILSQTVLSLLLQGNAFLAVRWA--GPNIAGLDVLDPTKIHVHMVMVDGLRRKVFEA 158 (457) T ss_pred cccccchHHHHhccccCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC--CCcEEEEEEEcCcceEEEEeccCCccceeEEE Confidence 2344555555555689999999999999999999999999999764 589999999999999987654432 3333 Q ss_pred EEeecCCe---EEEEcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHH Q lcl|Aclame:pro 141 FTDMLTAK---QVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDAR 216 (406) Q Consensus 141 ~~~~~~g~---~~~~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~ 216 (406) |.....|. ...|++++|||||+++.++ ++|+||+.+++.+|..+.++.++..++|+||++|+++++.++.+++|++ T Consensus 159 y~~~~~g~~~~~~~~~~~eiih~r~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~ls~e~~ 238 (457) T protein:vir:62 159 YDIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGAHFFRNGAMPGAVVEVPGTMSEEGL 238 (457) T ss_pred EEEccCCceeEEEeeCccceEEecCCCCCCceecccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEcCCCCCHHHH Confidence 44343333 2468899999999887766 8999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc----cchhHHHHH Q lcl|Aclame:pro 217 QRARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS----PNQSVAQLM 291 (406) Q Consensus 217 ~~~~~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~----~~~n~~~~~ 291 (406) +++++.|++.++| .|++++++|++|++|+++++++.|+||+|++++++++||++|||||.+||... +++|++++. T Consensus 239 ~~~~~~~~~~~~G~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~eq~~ 318 (457) T protein:vir:62 239 ARAREAWRAANSGVDNAHRVALLTEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLISDATNSTSWGSGLAEQN 318 (457) T ss_pred HHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCcccccchHHHHH Confidence 9999999999998 57899999999999999999999999999999999999999999999998633 247899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Q lcl|Aclame:pro 292 EDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPN 367 (406) Q Consensus 292 ~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~ 367 (406) +.|+++||.||+++||++||++|++..+...++++|++ +.|.+++++.+.+++++|+||+||+|+++|+||+++++ T Consensus 319 ~~f~~~~l~P~~~~ie~~ln~~L~~~~~~~~~~i~fd~~~l~~~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~~g~ 398 (457) T protein:vir:62 319 IAFTMFSLRPWLERIEAGFNRLLFAETADRFRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLPDGL 398 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCccccCceEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Confidence 99999999999999999999999998887767778875 45778999999999999999999999999999999888 Q ss_pred CCeeeeccCccchhhccccccccCccc--------------CCCccCCCCCCC Q lcl|Aclame:pro 368 MDRYQSSLNYVFLDKKEEYQDKVGIKG--------------KGGEVNAEEDKS 406 (406) Q Consensus 368 gd~~~~~~n~~~~~~~~~~~~~~~~~~--------------~gg~~~~~~~~~ 406 (406) ||++++|+|+++++...+.+....+.. .+.+.+.+++++ T Consensus 399 ~D~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 451 (457) T protein:vir:62 399 GEKYRVPLNLGEIGEEPEPEPAPAPPAIDPPAEEPADDEEPDNAEGDPDEGET 451 (457) T ss_pred cceeeeccccccccccccccccCCCccCCCCccCCCCCCCCCCCCCCCccccc Confidence 999999999998886544322111100 000111111111 No 32 >protein:vir:93610 Length: 454 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449295;genbank:gi:157166043;interpro:IPR006427;interpro:IPR006944;uniprot:Q6H9U6;genbank:GeneID:5580432 Probab=100.00 E-value=7.9e-91 Score=514.54 Aligned_cols=400 Identities=17% Similarity=0.220 Sum_probs=331.2 Q ss_pred CcccccccCC-C----Cc---chh---hHHHhhcCC--cccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc-- Q lcl|Aclame:pro 1 MSFFQPLGTS-K----VS---YDD---YISSVLAGD--VSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD-- 65 (406) Q Consensus 1 M~~f~~~~~~-~----~~---~~~---~~~~~~~~~--~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~-- 65 (406) -+||++.+.. + .+ +.. ++.+.+.+. .+..+++.+||++++||+||++||++||+|||++|+.+++ T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~g~ 81 (454) T protein:vir:93 2 WNLLRRTRKNQKSGRDVREAGWTSLFQAVAEPFAGAWQQGVKADPEAVLSFHAVFACISLISQDIAKMRLRLMQTDAQGI 81 (454) T ss_pred CCccccCcccccccccccchhhhhhhhhhhhhhcchhhcCcccChHHhhccHHHHHHHHHHHHhhccCceEEEEeccCCc Confidence 5666552221 1 11 111 122223332 3456889999999999999999999999999999986432 Q ss_pred -ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEee Q lcl|Aclame:pro 66 -IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDM 144 (406) Q Consensus 66 -~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~ 144 (406) ....+++.++|+.+||++||+++||+.++.+++++||+|++++++. .|++++|+|++|+.|++..+.+|.+.|.+... T Consensus 82 ~~~~~~~~~~~L~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~-~G~~~~L~~i~~~~v~v~~~~~g~~~y~~~~~ 160 (454) T protein:vir:93 82 RRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNA-RGQIKELRILDWNRVEPLVADDGEVFYRITPD 160 (454) T ss_pred cchhhhHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEECC-CCcEEEEEEEcCcceEEEEcCCCcEEEEEEec Confidence 3344555667778999999999999999999999999999999984 48999999999999999999999988877654 Q ss_pred cC---CeEEEEcceeeEeecc-CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHH Q lcl|Aclame:pro 145 LT---AKQVKCFAHDVIHWKF-FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRAR 220 (406) Q Consensus 145 ~~---g~~~~~~~~~vih~r~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~ 220 (406) .. +....+++++|||+|. ++.++++|+||+..+..++..+.++.++..++|+||++|+++++.++.+++++.++++ T Consensus 161 ~~~~~~~~~~~~~~eViH~k~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~ 240 (454) T protein:vir:93 161 RNCGITEAVTVPAREVIHDRFNCFFHPLIGLPPVYAAGLAATQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKLK 240 (454) T ss_pred cccccceeEEecCcceEEeccCCCCCCceeccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEecCCCCCHHHHHHHH Confidence 43 4567899999999996 5678999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHH Q lcl|Aclame:pro 221 QEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTND 298 (406) Q Consensus 221 ~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~ 298 (406) +.|++.++|.++|+++||++|++|++++.++.|+||+|++++++++||++|||||++||. .++++|++++.+.|++++ T Consensus 241 ~~~~~~~~g~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~~~ 320 (454) T protein:vir:93 241 SNWDSGYTGENAGKTAILSNGAKYNPTTFSPVDSQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQQYYSQC 320 (454) T ss_pred HHHHHHhcccccCCceeccCCceEEEcccChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCcchhHHHHHHHHHHHH Confidence 999999999899999999999999999999999999999999999999999999999986 457899999999999999 Q ss_pred HHHHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeec Q lcl|Aclame:pro 299 LPFYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSS 374 (406) Q Consensus 299 i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~ 374 (406) |.||++.||++||++|++..+ ++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||+++++ T Consensus 321 l~P~~~~ie~~ln~~L~~~~~---~~~~f~~~~ll~~D~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi--~ggD~~~~~ 395 (454) T protein:vir:93 321 LQTLIESIELLLDEALETGEN---ESTEFDVTTLLRMDSERRMKTLGDAVKNTLLTPNEARKRENLPPL--AGGDALYLQ 395 (454) T ss_pred HHHHHHHHHHHHHHhhcCCCC---cEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCeeeec Confidence 999999999999999987544 3456654 5678899999999999999999999999999999 679999999 Q ss_pred cCccchhhccccccccCc---ccCCC---ccCCCCCCC Q lcl|Aclame:pro 375 LNYVFLDKKEEYQDKVGI---KGKGG---EVNAEEDKS 406 (406) Q Consensus 375 ~n~~~~~~~~~~~~~~~~---~~~gg---~~~~~~~~~ 406 (406) .|.+|++.....+..... .++.+ +++.+.|.| T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 433 (454) T protein:vir:93 396 QQNYSLEALSRRDAREDPFASSGKTASVPQAVAASDGN 433 (454) T ss_pred cCccchHhhhccCcccCCCCCCccCCCCCCCCCCCCCC Confidence 999998876543322111 11100 011111111 No 33 >protein:vir:80333 Length: 419 # NCBI annotation: gp4, phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111083;genbank:gi:134288632;genbank:GeneID:4960580 Probab=100.00 E-value=1.1e-90 Score=513.75 Aligned_cols=390 Identities=17% Similarity=0.154 Sum_probs=335.7 Q ss_pred CcccccccCC---CCc-chhhHHHhhcCCc---ccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC---cccccc Q lcl|Aclame:pro 1 MSFFQPLGTS---KVS-YDDYISSVLAGDV---SQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG---DIIHDE 70 (406) Q Consensus 1 M~~f~~~~~~---~~~-~~~~~~~~~~~~~---~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~---~~~~~~ 70 (406) |-|.+++++. .++ ...|+..++++.. +..+++.+||++++||+||++||++||++|+++|+.++ +....| T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~v~~~~al~~~~v~~cv~~ia~~ia~lp~~~~~~~~~~~~~~~~~ 80 (419) T protein:vir:80 1 MFFSRQLLSNLGQTQPGSGGWVSALLGSARSEAGQVVTPASALSLTVLQNCVTLLAESIAQLPVELYERSGDDRKPATDH 80 (419) T ss_pred CCcccccccccCcCCCCcchhhHHhhcccccccCcccChHHhhccHHHHHHHHHHHHhhccCceEEEEecCCCccccccc Confidence 8766554332 222 3556666665433 46789999999999999999999999999999998643 355689 Q ss_pred hHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEE Q lcl|Aclame:pro 71 DINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQV 150 (406) Q Consensus 71 ~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~ 150 (406) +++++|+.+||++||+++||+.++.+++++||+|++++++. .|+|++|||++|+.|++..+.++.++|.+.. .. T Consensus 81 ~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~-~G~~~~L~~i~~~~v~i~~~~~~~~~y~~~~-----~~ 154 (419) T protein:vir:80 81 PLYSILKYEPNPWQTPFEYQEQSQVAVGLRGNSYSFIDRDQ-DGVIQGLYPLDNEAVTVMKGPDLKPMYRVAG-----AD 154 (419) T ss_pred HHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECC-CCcEEEEEEecCceEEEEECCCceEEEEEcC-----cc Confidence 99999999999999999999999999999999999999985 5899999999999999999888887766532 12 Q ss_pred EEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCC----CCHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 KCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQ----LSGDARQRARQEFEKM 226 (406) Q Consensus 151 ~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~----~~~e~~~~~~~~~~~~ 226 (406) .+++++|+|+|+++.++++|+||+..+..+|..+.++.++..++|+||+.|+++++.+.. .++++.+++++.|++. T Consensus 155 ~~~~~~i~h~~~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (419) T protein:vir:80 155 PLPQRLVHHVRWMSINGYTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPTDAPALKDQASVDRITDGWNAK 234 (419) T ss_pred ccchhheEEecCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCHHHHHHHHHHHHHH Confidence 488999999999999999999999999999999999999999999999999999987653 3788999999999999 Q ss_pred hcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 227 REG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYF 303 (406) Q Consensus 227 ~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~ 303 (406) ++| .++|+++++++|++|++++.++.|+||+|.+++++++||++|||||.+||. .++++|++++.+.|+++||.|++ T Consensus 235 ~~g~~n~g~~~vl~~g~~~~~l~~s~~d~q~~e~~~~~~~~Ia~~fgVPp~llg~~~~~t~~n~e~~~~~f~~~~l~P~~ 314 (419) T protein:vir:80 235 FGGSGNAKKVALLQEGMKFKPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELERATFSNIEHQSLQFVIYTLLPWV 314 (419) T ss_pred hcCccccCCceecCCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCCCCcccHHHHHHHHHHHHHHHHH Confidence 988 577899999999999999999999999999999999999999999999986 46789999999999999999999 Q ss_pred HHHHHHHHhhccCccchhhhhhhhccc----chhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccc Q lcl|Aclame:pro 304 DAITSELGLKTLNDKDRRLYHIEFDTR----SVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVF 379 (406) Q Consensus 304 ~~ie~~l~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~ 379 (406) ++||++|+++|+++.++..++++|+++ .|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++|+|+++ T Consensus 315 ~~ie~~l~~kll~~~~~~~~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~--~gGD~~~~~~n~~~ 392 (419) T protein:vir:80 315 KRHEQAKTRDLLLPSERKQYFIEYNLAGLLRGDQSSRYAAYAVGRQWGWLSINDIRRLENMPPV--KGGDIYLSPMNMVD 392 (419) T ss_pred HHHHHHHhhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcceeeecccccc Confidence 999999999999988877778888754 478899999999999999999999999999999 67999999999987 Q ss_pred hhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 380 LDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 380 ~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) .+.... .++|+.+..+... T Consensus 393 ~~~~~~--------~~~~~~~~~~~~~ 411 (419) T protein:vir:80 393 ASKPQP--------IPMGKTEPTKAAL 411 (419) T ss_pred cccccc--------ccCCCCCchhhhH Confidence 664332 2223322221111 No 34 >protein:vir:96980 Length: 409 # NCBI annotation: ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1643 # MgeName: 42e # Cross-refs: genbank:acc:YP_239857;genbank:gi:66395516;genbank:GeneID:5133013 Probab=100.00 E-value=1.6e-90 Score=512.85 Aligned_cols=390 Identities=18% Similarity=0.203 Sum_probs=335.3 Q ss_pred CcccccccCCC------Ccchhh--HHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchH Q lcl|Aclame:pro 1 MSFFQPLGTSK------VSYDDY--ISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDI 72 (406) Q Consensus 1 M~~f~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~ 72 (406) |++|.++++.- .+.... +..+. +.....++...++++++||+||++||++||+||+++++.++ ...|++ T Consensus 4 ~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~a~~~~~V~~ci~~ia~~ia~lp~~~~~~~~--~~~~~l 80 (409) T protein:vir:96 4 ENIVTRIKKKLIDNWIDQSASKLYDFSPWK-NKSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK--VVNTEV 80 (409) T ss_pred ccchhhhhhHHhhhhhcccccccccccccc-CccccccchhhHhhhHHHHHHHHHHHHhhhhCceEEeeccc--ccchhH Confidence 77888766531 111111 11121 22345578888999999999999999999999999998654 356899 Q ss_pred HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEE Q lcl|Aclame:pro 73 NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKC 152 (406) Q Consensus 73 ~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~ 152 (406) .++|+.+||++||+++||+.++.+++++||+|++++++ ..|+|++|||++|+.|++..+.++..+++.....+|..+.+ T Consensus 81 ~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~G~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~g~~~~~ 159 (409) T protein:vir:96 81 SDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERD-IYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATGNKLIV 159 (409) T ss_pred HHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEEC-CCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcCCceEEEE Confidence 99999999999999999999999999999999999998 45899999999999999998887776666666777888999 Q ss_pred cceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccc Q lcl|Aclame:pro 153 FAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSV 231 (406) Q Consensus 153 ~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~ 231 (406) ++++|||||++ +.++++|+||+..+..+++.+.++.++. ++.++..+++++..+..++++++++++++|++.++ + T Consensus 160 ~~~evih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~~~~~~--n 235 (409) T protein:vir:96 160 HNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVSTEKRQQVLEDFKQYYE--E 235 (409) T ss_pred ccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCceeEEecCCCCCHHHHHHHHHHHHHHhh--c Confidence 99999999974 7789999999999999999999988774 45555566778888999999999999999999885 5 Q ss_pred cCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 232 GGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYFDAITSE 309 (406) Q Consensus 232 ~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~~~ie~~ 309 (406) +++++++++|++|+++++++.|+|++|++++++++||++|||||++||. .++++|+|++.+.|++++|.|++++||++ T Consensus 236 ~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~ie~~ 315 (409) T protein:vir:96 236 NGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSNTNFAKNEELNRFYLQHTLLPIVKQYEEE 315 (409) T ss_pred CCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH Confidence 6789999999999999999999999999999999999999999999986 45789999999999999999999999999 Q ss_pred HHhhccCccchh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcc Q lcl|Aclame:pro 310 LGLKTLNDKDRR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE 384 (406) Q Consensus 310 l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~ 384 (406) |+++|++..++. .++++|++ +.|.+++++++.+++++|++|+||+|+++|+||+ ||||++++++|++|++... T Consensus 316 l~~~Ll~~~~~~~g~~i~fd~~~ll~~d~~~~~e~~~~~~~~G~~T~NE~R~~~g~~pi--~ggD~~~~~~n~~~~~~~~ 393 (409) T protein:vir:96 316 FNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPV--EGGDKPLISGDLYPIDTPL 393 (409) T ss_pred HHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCC--CCcceeeecccccccccch Confidence 999999987753 46677775 4568899999999999999999999999999999 6799999999999998644 Q ss_pred ccccccCcccCCCccCCCCC Q lcl|Aclame:pro 385 EYQDKVGIKGKGGEVNAEED 404 (406) Q Consensus 385 ~~~~~~~~~~~gg~~~~~~~ 404 (406) . .+...+|||+|++++ T Consensus 394 ~----~~~~~~gG~~n~~e~ 409 (409) T protein:vir:96 394 E----LRKSLKGGDKNVNES 409 (409) T ss_pred h----hcccccCCCCCcCCC Confidence 3 234578899888888 No 35 >protein:vir:1326 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:28 # MgeName: phi-C31 # Cross-refs: genbank:acc:NP_047925;swissprot:trembl:q9zxb2;genbank:gi:9631143;uniprot:Q9ZXB2;genbank:GeneID:2715872 Probab=100.00 E-value=3.2e-90 Score=511.23 Aligned_cols=403 Identities=16% Similarity=0.200 Sum_probs=330.1 Q ss_pred CcccccccCCCCc-------------chhhHHHhhcC-CcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC-- Q lcl|Aclame:pro 1 MSFFQPLGTSKVS-------------YDDYISSVLAG-DVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG-- 64 (406) Q Consensus 1 M~~f~~~~~~~~~-------------~~~~~~~~~~~-~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~-- 64 (406) ||||+++.++... .+..+..+.+. ..+..|++.+||++++||+||++||++||+||+++|+.++ T Consensus 1 Mg~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~~ 80 (457) T protein:vir:13 1 MGFWSALFGRGHSPALDGIEARAWEPYDPSIYNLGAVAASGETVTPHDALQVSAVFASVRLLSETIATLPLSTYSKRGGS 80 (457) T ss_pred CchhhhhhcccccccccccccccccccchHHHhhcccccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 9998765433211 22333333322 2356789999999999999999999999999999998643 Q ss_pred -cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc----eEE Q lcl|Aclame:pro 65 -DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE----IVY 139 (406) Q Consensus 65 -~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~----~~~ 139 (406) +....|.+..+|+.+|| .|++++||+.++.+++++||+|++|+++ +|+|++|||++|+.|++..+..+. +++ T Consensus 81 ~~~~~~~~l~~~ln~~~n-~~t~~~f~~~~~~~lll~Gna~~~i~~~--~g~~~~l~~l~p~~v~v~~~~~~~~~~~~~~ 157 (457) T protein:vir:13 81 RKEIVTPEWLDYPNAEPG-GMGRIDILSQTVLSLLLQGNAFLAVRWQ--GPNIVGLDVLDPTKIHVHMVMVDGLRRKVFE 157 (457) T ss_pred ccccccchHHHhccccCC-CCCHHHHHHHHHHHHhhcCCeEEEEEec--CCcEEEEEEEccCceEEEEecCCCccceeEE Confidence 35567788888876555 7999999999999999999999999774 489999999999999987665543 333 Q ss_pred EEEeecCCe---EEEEcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHH Q lcl|Aclame:pro 140 TFTDMLTAK---QVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDA 215 (406) Q Consensus 140 ~~~~~~~g~---~~~~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~ 215 (406) .|.....+. ...|++++|||+|+++.++ ++|+||+.++..+|..+.++.++..++|+||++|+++++.++.+++++ T Consensus 158 ~y~~~~~~~~~~~~~~~~~diih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~ls~e~ 237 (457) T protein:vir:13 158 AYDIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGSKFFANGAMPGAVVEVPGTMSEEG 237 (457) T ss_pred EEEEecCCceeeEEeeCccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcCCCCCHHH Confidence 344443433 3468899999999987765 899999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc----cchhHHHH Q lcl|Aclame:pro 216 RQRARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS----PNQSVAQL 290 (406) Q Consensus 216 ~~~~~~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~----~~~n~~~~ 290 (406) ++++++.|++.++| .|+|+++||++|++|+++++++.|+||+|++++++++||++|||||++||... +++|++++ T Consensus 238 ~~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~eq~ 317 (457) T protein:vir:13 238 LARAREAWRAANSGVDNAHRVALLTEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLISDATNSTSWGSGLAEQ 317 (457) T ss_pred HHHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCcccccchHHHH Confidence 99999999999988 57899999999999999999999999999999999999999999999998633 34789999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Q lcl|Aclame:pro 291 MEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDP 366 (406) Q Consensus 291 ~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~ 366 (406) .+.|+.+||.||+++||++|+++|++..+...++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||++++ T Consensus 318 ~~~f~~~tl~P~~~~ie~~ln~~L~~~~~~~~~~i~fd~~~l~~~D~~~r~~~~~~~~~~G~~T~NE~R~~~gl~Pi~~g 397 (457) T protein:vir:13 318 NIAFTMFSLRPWLERIEAGFNRLLFAETADRFRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLPDG 397 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCccccCceeEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 999999999999999999999999998877667778875 4577899999999999999999999999999999988 Q ss_pred CCCeeeeccCccchhhcccccc---c------cCc----ccCCCccC-------CCCCCC Q lcl|Aclame:pro 367 NMDRYQSSLNYVFLDKKEEYQD---K------VGI----KGKGGEVN-------AEEDKS 406 (406) Q Consensus 367 ~gd~~~~~~n~~~~~~~~~~~~---~------~~~----~~~gg~~~-------~~~~~~ 406 (406) +||++++|+|+++++...+.+. + ... ..++|..+ +++|.+ T Consensus 398 ~~d~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~~~~~~~ 457 (457) T protein:vir:13 398 LGEKYRVPLNLGEVGEEPEPEPAPAPPAIEPPAEEPDEEPEPEGKPDDEGATEEDDEDDA 457 (457) T ss_pred cccceeeccccccccccccccccCCCCCCCCCccccCCCCCCCCCCccccCCCCcccccC Confidence 8899999999999875433211 0 001 11111111 111111 No 36 >protein:vir:94426 Length: 409 # NCBI annotation: ORF009 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1506 # MgeName: 47 # Cross-refs: genbank:acc:YP_240003;genbank:gi:66395665;genbank:GeneID:5133086 Probab=100.00 E-value=2e-89 Score=506.86 Aligned_cols=390 Identities=18% Similarity=0.202 Sum_probs=333.3 Q ss_pred Cc---ccccccCCC------Ccchh--hHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCccccc Q lcl|Aclame:pro 1 MS---FFQPLGTSK------VSYDD--YISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHD 69 (406) Q Consensus 1 M~---~f~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 69 (406) |. ++.++++.. .+... .+..+. +.....++...|+++++||+||++||++||+||+++++.++ ... T Consensus 1 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~a~~~~~v~~~i~~Ia~~ia~lp~~~~~~~~--~~~ 77 (409) T protein:vir:94 1 MAKENIVTRIKKKLIDNWIDQSASKLYDFSPWK-NKSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK--VVN 77 (409) T ss_pred CcccccchhhhhHHhhhhhcCCccccccccccc-CccccccchhhhhccHHHHHHHHHHHHhhhhCceeEeeccc--ccc Confidence 65 455544421 01111 111111 22334578888999999999999999999999999998654 356 Q ss_pred chHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeE Q lcl|Aclame:pro 70 EDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQ 149 (406) Q Consensus 70 ~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~ 149 (406) |++.++|+.+||++||+++||+.++.+++++||+|++++++ ..|+|++|+|++|+.+++..+.++..+++.....+|.. T Consensus 78 ~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~G~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~g~~ 156 (409) T protein:vir:94 78 TEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERD-IYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATGNK 156 (409) T ss_pred hhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcCCceE Confidence 89999999999999999999999999999999999999998 55899999999999999988877766555556677888 Q ss_pred EEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 150 VKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMRE 228 (406) Q Consensus 150 ~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 228 (406) +.+++++|||||++ +.++++|+||+.++..+++.+.++.++. ++.++..+++++..+..+++++++++++.|++.++ T Consensus 157 ~~~~~~dvih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~~~~~~ 234 (409) T protein:vir:94 157 LIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQVLEDFKQYYE 234 (409) T ss_pred EEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCeeEEecCCCCCHHHHHHHHHHHHHHhh Confidence 89999999999975 6789999999999999999999998874 55566667788889999999999999999999885 Q ss_pred ccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 229 GSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYFDAI 306 (406) Q Consensus 229 g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~~~i 306 (406) ++++++++++|++|++++++++|+||+|.+++++++||++|||||++||. .++++|++++.+.|+++||.|++++| T Consensus 235 --~~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~sn~e~~~~~f~~~~l~P~~~~i 312 (409) T protein:vir:94 235 --ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPIVKQY 312 (409) T ss_pred --cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHHHHHHH Confidence 56789999999999999999999999999999999999999999999996 45789999999999999999999999 Q ss_pred HHHHHhhccCccchh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchh Q lcl|Aclame:pro 307 TSELGLKTLNDKDRR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLD 381 (406) Q Consensus 307 e~~l~~~l~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~ 381 (406) |++|+++|++..++. .++++|++ +.|.+++++++.+++++|++|+||+|+++|+||+ |+||++++++|++|++ T Consensus 313 e~~ln~~Ll~~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~--~ggD~~~~~~n~~~~~ 390 (409) T protein:vir:94 313 EEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPV--EGGDKPLISGDLYPID 390 (409) T ss_pred HHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcCeEeecccccccc Confidence 999999999987754 46678775 4568899999999999999999999999999999 6799999999999998 Q ss_pred hccccccccCcccCCCccCCCCC Q lcl|Aclame:pro 382 KKEEYQDKVGIKGKGGEVNAEED 404 (406) Q Consensus 382 ~~~~~~~~~~~~~~gg~~~~~~~ 404 (406) ..... ....||||+|++++ T Consensus 391 ~~~~~----~~~~kGG~~n~~e~ 409 (409) T protein:vir:94 391 TPLEL----RKSLKGGDKNVNES 409 (409) T ss_pred cchhh----cccccCCCCCcCCC Confidence 75432 34578999888888 No 37 >protein:vir:93943 Length: 409 # NCBI annotation: ORF010 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1485 # MgeName: 3A # Cross-refs: genbank:acc:YP_239936;genbank:gi:66395598;genbank:GeneID:5131009 Probab=100.00 E-value=2.6e-89 Score=506.28 Aligned_cols=390 Identities=18% Similarity=0.198 Sum_probs=330.8 Q ss_pred Cc---ccccccCC--------CCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCccccc Q lcl|Aclame:pro 1 MS---FFQPLGTS--------KVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHD 69 (406) Q Consensus 1 M~---~f~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 69 (406) |. ++.++++. +.+...-...+.. .....++..+++++++||+||++||++||++|+++++.++ ... T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~V~~ci~~Ia~~ia~lp~~~~~~~~--~~~ 77 (409) T protein:vir:93 1 MAKENIVTRIKKKLIDNWIDQSTSKLYDFSPWKN-RSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK--VVN 77 (409) T ss_pred CCccchhhhhhhhhhhhhhccccccccccccccC-ccccccchhhhhccHHHHHHHHHHHHhhhhCceeEeeccc--ccc Confidence 54 33332221 1110011111111 2334577788999999999999999999999999998654 347 Q ss_pred chHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeE Q lcl|Aclame:pro 70 EDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQ 149 (406) Q Consensus 70 ~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~ 149 (406) |++.++|+.+||++||+++||+.++.+++++||+|++++++ ..|++.+|+|++|+.|++..+.+++.+++.....+|.. T Consensus 78 ~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~G~~~~L~~l~~~~v~~~~~~~~~~~~y~~~~~~g~~ 156 (409) T protein:vir:93 78 TEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERD-IYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATGNK 156 (409) T ss_pred chHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEEC-CCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcCCceE Confidence 88999999999999999999999999999999999999998 55899999999999999988877765555555677888 Q ss_pred EEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 150 VKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMRE 228 (406) Q Consensus 150 ~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 228 (406) +.+++++|||+|++ +.++++|+||+.++..++..+.++.++. ++.++..+++++..+..++++++++++++|++.++ T Consensus 157 ~~~~~~eVih~r~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~~~~~~ 234 (409) T protein:vir:93 157 LIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQVLEDFKQYYE 234 (409) T ss_pred EEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecCCCCCHHHHHHHHHHHHHHhh Confidence 89999999999975 7789999999999999999999998874 56666677888889999999999999999999875 Q ss_pred ccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 229 GSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYFDAI 306 (406) Q Consensus 229 g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~~~i 306 (406) ++++++++++|++|+++++++.|+||+|++++++++||++|||||++||. .++++|+|++.+.|++.||.|++++| T Consensus 235 --~~g~~~vl~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~~~~~sn~e~~~~~f~~~~l~P~~~~i 312 (409) T protein:vir:93 235 --ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPIVKQY 312 (409) T ss_pred --cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHHHHHHH Confidence 46789999999999999999999999999999999999999999999996 45789999999999999999999999 Q ss_pred HHHHHhhccCccchh-hhhhhhccc----chhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchh Q lcl|Aclame:pro 307 TSELGLKTLNDKDRR-LYHIEFDTR----SVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLD 381 (406) Q Consensus 307 e~~l~~~l~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~ 381 (406) |++|+++|++..++. .++++|+++ .|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++++|++|++ T Consensus 313 e~~l~~~Ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~--~ggD~~~~~~n~~~~~ 390 (409) T protein:vir:93 313 EEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPV--EGGDKPLISGDLYPID 390 (409) T ss_pred HHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcCeeeecccccccc Confidence 999999999987754 466787754 568889999999999999999999999999999 6799999999999998 Q ss_pred hccccccccCcccCCCccCCCCC Q lcl|Aclame:pro 382 KKEEYQDKVGIKGKGGEVNAEED 404 (406) Q Consensus 382 ~~~~~~~~~~~~~~gg~~~~~~~ 404 (406) .... .....+|||+|++++ T Consensus 391 ~~~~----~~~~~~gG~~n~~e~ 409 (409) T protein:vir:93 391 TPLE----LRKSLKGGDKNVNES 409 (409) T ss_pred cchh----hcccccCCCCCcCCC Confidence 6543 234568898888888 No 38 >protein:vir:7853 Length: 518 # NCBI annotation: gp10 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817460;genbank:gi:29565889;genbank:GeneID:1259085 Probab=100.00 E-value=9.9e-89 Score=503.05 Aligned_cols=404 Identities=17% Similarity=0.195 Sum_probs=324.5 Q ss_pred Cccccccc-CCCC--cchhhHHHhhcCCccc--------ccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc--cc Q lcl|Aclame:pro 1 MSFFQPLG-TSKV--SYDDYISSVLAGDVSQ--------KYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD--II 67 (406) Q Consensus 1 M~~f~~~~-~~~~--~~~~~~~~~~~~~~~~--------~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~--~~ 67 (406) |=+=+-.. +.+. ....++...+.+.+.. .+....++++++||+||++||++||++||++|+.+++ .. T Consensus 1 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~acV~~IA~~iA~lp~~l~~~~~~~~~~ 80 (518) T protein:vir:78 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) T ss_pred CcccCceeeccchhhhhhhhhhhcccccceeceecccccchhhHHhhhhHHHHHHHHHHHHhhccCceEEEEEcCCcccc Confidence 32222111 1111 1123333333332221 2333457899999999999999999999999986433 33 Q ss_pred ccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccC-cceEEEEEee-- Q lcl|Aclame:pro 68 HDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN-HEIVYTFTDM-- 144 (406) Q Consensus 68 ~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~-g~~~~~~~~~-- 144 (406) ..++...+|+.+||++||+++||+.++.+++++||+|++++++ ..|+|++|||++|+.|++..+.+ +.+.|.+... T Consensus 81 ~~~~~~~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~-~~G~~~~L~~l~p~~Vtv~~~~~~~~~~y~~~~~~~ 159 (518) T protein:vir:78 81 EHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN-KSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) T ss_pred ccchHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEc-CCCcEEEEEEECCCceEEEEcCCCCEEEEEEEecCC Confidence 4555666777899999999999999999999999999999997 55899999999999999988765 4455544432 Q ss_pred cCCeEEEEcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHH Q lcl|Aclame:pro 145 LTAKQVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEF 223 (406) Q Consensus 145 ~~g~~~~~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~ 223 (406) ..+..+.|++++|||||+++.++ .+|+||+.++...|..+.++.++..++|+||++|+++++.++.+++++.+++++.| T Consensus 160 ~~~~~~~~~~~eIiHir~~~~dg~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~Ng~~p~gvl~~~~~ls~e~~~~~k~~~ 239 (518) T protein:vir:78 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRLREQF 239 (518) T ss_pred ccceeEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHHHHHHH Confidence 23466789999999999887777 48999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHH Q lcl|Aclame:pro 224 EKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLP 300 (406) Q Consensus 224 ~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~ 300 (406) ++.++| .|+|++++|++|++|+++++++.|+||+|.+++++++||++|||||.+||. .++++|++++.+.|+++||. T Consensus 240 ~~~~~G~~nag~~~vL~~G~~~~~l~~~~~d~q~le~r~~~~~eIa~afgVPp~~lg~~~~st~sn~e~~~~~f~~~tL~ 319 (518) T protein:vir:78 240 DRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMA 319 (518) T ss_pred HHHhcCcccCCceeEcCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccCCCCCchhHHHHHHHHHHHHHH Confidence 999988 578999999999999999999999999999999999999999999999996 45789999999999999999 Q ss_pred HHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccC Q lcl|Aclame:pro 301 FYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLN 376 (406) Q Consensus 301 P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n 376 (406) ||+.+||++||++|++..+. .++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+++|+||+++++.| T Consensus 320 P~~~~ie~eln~~L~~~~~~-~~~~~fd~~~Llr~D~~~r~~~~~~~~~~G~lT~NE~R~~~gl~pie~~~gD~~~v~~n 398 (518) T protein:vir:78 320 IPIARIQSAMDKYVGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSA 398 (518) T ss_pred HHHHHHHHHHHHhhcccccC-cceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeeccc Confidence 99999999999999886654 34567764 56788999999999999999999999999999999999999999999 Q ss_pred ccchhhccccccccCc--------ccCCCccCCCCCCC Q lcl|Aclame:pro 377 YVFLDKKEEYQDKVGI--------KGKGGEVNAEEDKS 406 (406) Q Consensus 377 ~~~~~~~~~~~~~~~~--------~~~gg~~~~~~~~~ 406 (406) ++|++........... ....++.++..++. T Consensus 399 ~~pl~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) T protein:vir:78 399 LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) T ss_pred ceecccccccccCCCCCCCCCCCCcccccccccCcccc Confidence 9998754322111000 00001111111111 No 39 >protein:vir:101648 Length: 518 # NCBI annotation: gp11 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654766;genbank:gi:109302764;genbank:GeneID:4156082 Probab=100.00 E-value=1.4e-88 Score=502.21 Aligned_cols=404 Identities=16% Similarity=0.190 Sum_probs=323.0 Q ss_pred Cccccc--ccCCCC-cchhhHHHhhcCCcc--------cccchhhhhccHHHHHHHHHHHHhhccceeEEEecC--Cccc Q lcl|Aclame:pro 1 MSFFQP--LGTSKV-SYDDYISSVLAGDVS--------QKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVN--GDII 67 (406) Q Consensus 1 M~~f~~--~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~--~~~~ 67 (406) |=+=+- +.+... ....++...+.+.+. ..+....++++++||+||++||++||++|+++|+.+ +... T Consensus 1 ~~~~~~~~~~~p~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~V~acV~~IA~~iA~lpl~l~~~~~~~~~~ 80 (518) T protein:vir:10 1 MLLANGQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGDTETE 80 (518) T ss_pred CcccCceeecCchhhhhhhhhhcccccccccceecccccchhhHHHhhhHHHHHHHHHHHHhhccCceEEEEEcCCCcee Confidence 432221 111110 111222222222221 123334578999999999999999999999999863 3333 Q ss_pred ccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccC-cceEEEEEee-- Q lcl|Aclame:pro 68 HDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN-HEIVYTFTDM-- 144 (406) Q Consensus 68 ~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~-g~~~~~~~~~-- 144 (406) ..++..++|+.+||++||+++||+.++.+++++||+|++++++ ..|+|++|+|++|+.|++..+.+ +.+.|.+... T Consensus 81 ~~~~~~~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~-~~G~~~~L~~l~p~~v~v~~~~~~~~~~y~~~~~~~ 159 (518) T protein:vir:10 81 ESDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKN-KSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQAGAG 159 (518) T ss_pred ccchHHHHHHcCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEECCCceEEEEcCCCCEEEEEEEecCC Confidence 4455556677899999999999999999999999999999998 45899999999999999988755 4555554432 Q ss_pred cCCeEEEEcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHH Q lcl|Aclame:pro 145 LTAKQVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEF 223 (406) Q Consensus 145 ~~g~~~~~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~ 223 (406) ..++.++|++++|||||+++.++ ++|+||+.++..+|..+.++.+++.++|+||++|+++++.++.+++++++++++.| T Consensus 160 ~~~~~~~~~~~eViHir~~s~dg~~~G~spi~~a~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~ls~e~~~~~k~~~ 239 (518) T protein:vir:10 160 VGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSEAAQQRLREQF 239 (518) T ss_pred ccceEEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHHHHHHH Confidence 23456789999999999988777 58999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHH Q lcl|Aclame:pro 224 EKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLP 300 (406) Q Consensus 224 ~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~ 300 (406) ++.++| .|+|+++||++|++|+++++++.|+||+|.+++++++||++|||||.+||. .++++|++++.+.|+++||. T Consensus 240 ~~~~~G~~nag~v~vL~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~lg~~~~~t~sn~eq~~~~f~~~tL~ 319 (518) T protein:vir:10 240 DRAHSGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYRDTMA 319 (518) T ss_pred HHHhcCccccCcceEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccCCCCCchhHHHHHHHHHHHHHH Confidence 999998 688999999999999999999999999999999999999999999999995 46789999999999999999 Q ss_pred HHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccC Q lcl|Aclame:pro 301 FYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLN 376 (406) Q Consensus 301 P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n 376 (406) ||+++||++|+++|++..+. .++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+++|+||+++++.| T Consensus 320 P~l~~ie~~ln~~L~~~~~~-~~~~~fd~~~llr~D~~~r~~~~~~~~~~G~lT~NE~R~~~Gl~pie~~~gD~~~~~~n 398 (518) T protein:vir:10 320 IPIARIQSAMDKYVGQYWVR-KNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYANSA 398 (518) T ss_pred HHHHHHHHHHHHhhcccccC-CceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccc Confidence 99999999999999887654 34667764 56788999999999999999999999999999999999999999999 Q ss_pred ccchhhccccccccCc--------ccCCCccCCCCCCC Q lcl|Aclame:pro 377 YVFLDKKEEYQDKVGI--------KGKGGEVNAEEDKS 406 (406) Q Consensus 377 ~~~~~~~~~~~~~~~~--------~~~gg~~~~~~~~~ 406 (406) ++|++........... ....++.+....+. T Consensus 399 ~~pl~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) T protein:vir:10 399 LQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPTS 436 (518) T ss_pred ceecccccccccCCCCCCCCCCCCcccccccccccccc Confidence 9998754322111100 00000100000010 No 40 >protein:vir:8418 Length: 409 # NCBI annotation: gp13 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818314;genbank:gi:29566750;genbank:GeneID:1260067 Probab=100.00 E-value=1.4e-88 Score=502.15 Aligned_cols=391 Identities=15% Similarity=0.166 Sum_probs=322.2 Q ss_pred CcccccccCCCC---cchh--hHH-H-hhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecC-CcccccchH Q lcl|Aclame:pro 1 MSFFQPLGTSKV---SYDD--YIS-S-VLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVN-GDIIHDEDI 72 (406) Q Consensus 1 M~~f~~~~~~~~---~~~~--~~~-~-~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~-~~~~~~~~~ 72 (406) ||||+++.+++. .... .+. . ......+..++..+|+++++||+||++||++||+|||++|+.+ +.....|++ T Consensus 1 Mgl~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~~~~~~~l 80 (409) T protein:vir:84 1 MSLFTRIFSGPSEERTLTKISGIPSPAEDWAMHGDRPGANSAMTLGAFYACVTLLADTVASLSIDAYRKKDNVRIPVSPA 80 (409) T ss_pred CchhhhhhcCCCcccccccccccccccchhhccCcccchhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCcccccchH Confidence 999986433221 1111 111 0 1112234567888999999999999999999999999999864 345567999 Q ss_pred HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc-eEEEEEeecCCeEEE Q lcl|Aclame:pro 73 NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE-IVYTFTDMLTAKQVK 151 (406) Q Consensus 73 ~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~-~~~~~~~~~~g~~~~ 151 (406) +++|+.+||++||+++||+.++.+++++||+|+++.+...+|+|++|+|++|+.+++....++. ..+++....+| .+ T Consensus 81 ~~lL~~~PN~~~t~~~f~~~l~~~l~l~Gn~~~~i~~~~~~g~~~~L~~l~p~~v~v~~~~~~~~~~~~~~~~~~g--~~ 158 (409) T protein:vir:84 81 PKLLESTPYPGLTWFDWLWMLMESLAVTGNAFGYISARDEANRPTAIMPIHPDCIHVTDAKDEDGDWIEPVYRIDG--KV 158 (409) T ss_pred HHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEECCCCceEEEEEEcCceeEEEEcCCCcceEEEEEecCCc--eE Confidence 9999999999999999999999999999999999986557799999999999999987654433 33333344444 46 Q ss_pred EcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 152 CFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGS 230 (406) Q Consensus 152 ~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~ 230 (406) +++++|||+|+++.++ ++|+||+..+..+|..+.++.+++.++|+||+.|+++++.++.+++++.++++++|.+.+. T Consensus 159 ~~~~dvih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~~~~~~-- 236 (409) T protein:vir:84 159 VPNHRIMHIKRYPVAGCALGMSPIEKAASAIGLGLAAERYGLRWFRDSANPSGILSSDADLTPDQVKQTQKQWIQSHH-- 236 (409) T ss_pred EchhhEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHHHHHHHHHHhc-- Confidence 8999999999877665 7999999999999999999999999999999999999999999999999999999998874 Q ss_pred ccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc----cchhHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 231 VGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS----PNQSVAQLMEDYVTNDLPFYFDAI 306 (406) Q Consensus 231 ~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~----~~~n~~~~~~~~~~~~i~P~~~~i 306 (406) ++|+++++++|++|++++.++.|+||+|.+++++++||++|||||++||... +++|++++.+.|+++||.||+++| T Consensus 237 n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~~l~P~~~~i 316 (409) T protein:vir:84 237 NRRLPAVMSAGIKWQSVSITPNESQFLETRSFQRSEIAMWFRIPPHMIGDVEKSTSWGTGIEEQGINFVRHTLLPWLRCI 316 (409) T ss_pred cCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccchHHHHHHHHHHHHHHHHHHHH Confidence 5688999999999999999999999999999999999999999999998632 347899999999999999999999 Q ss_pred HHHHHhhccCccchhhhhhhhc----ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhh Q lcl|Aclame:pro 307 TSELGLKTLNDKDRRLYHIEFD----TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDK 382 (406) Q Consensus 307 e~~l~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~ 382 (406) |++|+++|.. .++++|+ ++.|.+++++++.+++++|++|+||+|+++|+||+ |+||++++|+|++|++. T Consensus 317 e~~l~~~L~~-----g~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~p~--~ggD~~~~~~n~~~~~~ 389 (409) T protein:vir:84 317 EQALDTFLPR-----GQFVKFNVDGLMRGDVTARFTAYQMGLQNGIWSVNEVRAWEDAPPI--PEGDIHLQPMNFVPLGY 389 (409) T ss_pred HHHHHHhccC-----CCeEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcceeeeccccccccc Confidence 9999998732 2345555 45678899999999999999999999999999999 66999999999999986 Q ss_pred ccccccccCcccCCCccCCCC Q lcl|Aclame:pro 383 KEEYQDKVGIKGKGGEVNAEE 403 (406) Q Consensus 383 ~~~~~~~~~~~~~gg~~~~~~ 403 (406) ....+.. ....++++.++++ T Consensus 390 ~~~~~~~-~~~~~~~~~~gn~ 409 (409) T protein:vir:84 390 VPPEEPA-QEPQPNSATEGNK 409 (409) T ss_pred CCccccC-cCCCCCCccCCCC Confidence 5543332 2222233333333 No 41 >protein:vir:101647 Length: 460 # NCBI annotation: phage portal protein # Family: family:all:26542 # MgeID: mge:1646 # MgeName: 11b # Cross-refs: genbank:acc:YP_112492;genbank:gi:53793592;uniprot:Q5ZGG1;genbank:GeneID:3101755 Probab=100.00 E-value=2.8e-87 Score=495.09 Aligned_cols=396 Identities=15% Similarity=0.154 Sum_probs=326.9 Q ss_pred Cc-cccc----ccCCCCcchhhHHHhhcCC------cccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcc--- Q lcl|Aclame:pro 1 MS-FFQP----LGTSKVSYDDYISSVLAGD------VSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDI--- 66 (406) Q Consensus 1 M~-~f~~----~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~--- 66 (406) |- ++.+ ......+..+.+..+++.. .+..++...++++|+||+||++||++||+|||++|+.+... T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~v~~~v~~ia~~iA~lp~~v~~~~~~g~~~ 80 (460) T protein:vir:10 1 MANRIIRALRELTGLDNKFNDAFIKYIGQTFTKYDNNGKTYLEQGYNINPDVYSCISQMAAKTVAVPYTIKVVKDTKAYQ 80 (460) T ss_pred CchhHHHHHhhhhccCCCchHHHHHhhccccCCCccchhhhhHHHHhcchHHHHHHHHHHHhhhhCceEEEeccCCccch Confidence 43 3333 2222333222233333222 22346778899999999999999999999999999865432 Q ss_pred ---------------------------cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC---Ccee Q lcl|Aclame:pro 67 ---------------------------IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK---TNQA 116 (406) Q Consensus 67 ---------------------------~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~---~g~~ 116 (406) ...+.+..+|+.+||++||+++||+.++.+++++||+|++++++.. .|+| T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~~~~~G~~ 160 (460) T protein:vir:10 81 QLNNLNISTKGLYSFTQSLQKNRLDTKAFSETEKAFPLESPNPTQTWADIYSLYKTYMRLNGNCYFYLMSPDDGINAGVP 160 (460) T ss_pred hhhhhhhhhhhhHHHHHHhhcchhhhcccchhHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCCccCcee Confidence 2234455667889999999999999999999999999999999643 4899 Q ss_pred EEEeecCCeeEEEEEccCcceEE------EEEeecCCeEEEEcceeeEeeccCCC------CCccccCHHHHHHHHHHHH Q lcl|Aclame:pro 117 LQFQFYRPSETTVEETDNHEIVY------TFTDMLTAKQVKCFAHDVIHWKFFSH------DTILGRSPLLSLGDEIDLQ 184 (406) Q Consensus 117 ~~l~~l~p~~~~~~~~~~g~~~~------~~~~~~~g~~~~~~~~~vih~r~~~~------~~~~G~s~~~~~~~~i~~~ 184 (406) .+|||++|+.+++..+.++...+ .+....+|....+++++|||||+++. ++++|+||+..++.+|..+ T Consensus 161 ~~L~~l~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~r~~~~~~~~~~~~~~G~sp~~~~~~~i~~~ 240 (460) T protein:vir:10 161 SQMYVLPAHLIKIVLKDDINLLSTDSPIKSYMLIQGDQFIEFNEDEVIHTKYANPNFDLQGSHLYGMSPIRAILRNINSQ 240 (460) T ss_pred EEEEEEcCceEEEEEcCCCceeeeeeeeeEEEEecCceeEEecccceEEEecCCCCcccccCccccccHHHHHHHHHHHH Confidence 99999999999999888775432 23445678889999999999997543 3579999999999999999 Q ss_pred HHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHH Q lcl|Aclame:pro 185 TGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFS 263 (406) Q Consensus 185 ~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~ 263 (406) .++.++..++|+||++|+++++.+..+++++++++++.|++.++| .++|+++++++|++|+++++++.|+||+|.++++ T Consensus 241 ~~~~~~~~~~f~ng~~~~~i~~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~ 320 (460) T protein:vir:10 241 NSTIDNNVKTMQNGGVFGFIHGGSTGLTQPQADSLKQRLTEMDKSPDRLSQIAGASGEIAFTKISLNTDELKPFDYLKYD 320 (460) T ss_pred HHHHHHHHHHHhcCCCcceeeecCCCCCHHHHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhHHHHHHHHHHH Confidence 999999999999999999999999999999999999999999988 5788999999999999999999999999999999 Q ss_pred HHHHHHHhcCCHHHhccc----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchh-hhhhhhcccch--hHHH Q lcl|Aclame:pro 264 TAQIAKALRVPSYKLGVN----SPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRR-LYHIEFDTRSV--TGRN 336 (406) Q Consensus 264 ~~~Ia~~fgvpp~~lg~~----~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~-~~~~~~~~~~~--~~~~ 336 (406) +++||++|||||++||.. .+++|+|++.+.|++.||.|++++||++||++|++..+.. .++++|+...+ ++.+ T Consensus 321 ~~~Ia~~fgVPp~~lg~~~~~t~~~sn~e~~~~~f~~~~l~P~~~~ie~~ln~kl~~~~~~~~~~~i~~d~~~l~~l~~d 400 (460) T protein:vir:10 321 QKAICNALGWSDKLLNNNEGGGLNTGNLEEERKRVVTDNIQPDLVILKQAFDKKFIKRFKGYENAVIEWDISELPEMQTD 400 (460) T ss_pred HHHHHHHhCCCHHHhCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCceEEeecchhhhHHHH Confidence 999999999999999853 3578999999999999999999999999999999877653 46677776654 5667 Q ss_pred HHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCC Q lcl|Aclame:pro 337 VDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEE 403 (406) Q Consensus 337 ~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~ 403 (406) .++...++++|++|+||+|+++|+||+++++||++++|+|++|++...+ +..++.+|.+. T Consensus 401 ~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~-------~~~~~~~nq~~ 460 (460) T protein:vir:10 401 MVAMASWLNTIPVTPNEIRIAMKYETLNQDGMDIVFMPSNKVRIDDVSN-------NLIDSAFNQNQ 460 (460) T ss_pred HHHHHHHHhCCCCCHHHHHHHhCCCCCCCCCCCeeeecccccchhhccc-------ccCCCcccCCC Confidence 7778889999999999999999999999999999999999999985432 11111222222 No 42 >protein:vir:81218 Length: 423 # NCBI annotation: gp3, phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456733;genbank:gi:157168376;interpro:IPR006427;interpro:IPR006944;uniprot:Q9MBK2;genbank:GeneID:5580341 Probab=100.00 E-value=2.2e-86 Score=490.24 Aligned_cols=389 Identities=16% Similarity=0.172 Sum_probs=316.2 Q ss_pred CcccccccCCCCc---chh-hHHHhhcCC-c--ccc-cchhhhhccHHHHHHHHHHHHhhccceeEEEecC--C--cccc Q lcl|Aclame:pro 1 MSFFQPLGTSKVS---YDD-YISSVLAGD-V--SQK-YLGVSALKNSDILTATSIIAGDIARFPLVKKDVN--G--DIIH 68 (406) Q Consensus 1 M~~f~~~~~~~~~---~~~-~~~~~~~~~-~--~~~-~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~--~--~~~~ 68 (406) ||||++++.++.. ... ++.+..... . +.. .....++++|+|++||++||++||++|+++|+.+ + +... T Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~ia~~ia~lp~~~~~~~~dg~~~~~~ 80 (423) T protein:vir:81 1 MGFLQKLGLAPSVVATPEPIELVGPIFESLKLSTKNMTVEQIWEDQPHLRTVTTFIARNVASLQLQAFERVEDGGRERVR 80 (423) T ss_pred CchhHhhccccccccCccccccccccccccccccchhhHHHHHHhhhHHHHHHHHHHHhHhhCceEEEEEecCCceeeec Confidence 9999987554432 111 222221111 1 122 2333456899999999999999999999998743 2 3456 Q ss_pred cchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC-CceeEEEeecCCeeEEEEEccC--cceEEEEE--e Q lcl|Aclame:pro 69 DEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK-TNQALQFQFYRPSETTVEETDN--HEIVYTFT--D 143 (406) Q Consensus 69 ~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~-~g~~~~l~~l~p~~~~~~~~~~--g~~~~~~~--~ 143 (406) .|++.+||. +||++||+++||+.++.+++++||+|+++.++.. .+.+..++|+++..+++....+ +.+.|.+. . T Consensus 81 ~~~~~~ll~-~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~rd~~~~~~~~~l~p~~~~~v~~~~~~~~~~~~~Y~~~~~~ 159 (423) T protein:vir:81 81 EGHLARVCK-LANSDMTMYDLLERTMFDLCLYDEFFWLLPGDLGVDTPTLDIRPIPVSWVQRRAYKDGWGSLDYIIIESG 159 (423) T ss_pred cchHHHHhh-cCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCcCcceEEEeecccceeeeeeccCCCcceEEEEEEec Confidence 788888886 8999999999999999999999999999998742 3467788888888887765544 45555554 3 Q ss_pred ecCCeEEEEcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecC-----CCCHHHHH Q lcl|Aclame:pro 144 MLTAKQVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGA-----QLSGDARQ 217 (406) Q Consensus 144 ~~~g~~~~~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-----~~~~e~~~ 217 (406) ..+|..+.+++++|||+|.++.++ ++|+||+..++++|..+.++.++..++|+||+.|++++..+. .+++|+++ T Consensus 160 ~~~g~~~~~~~~evih~r~~~~~~~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gvi~~~~~~~~~~l~~e~~~ 239 (423) T protein:vir:81 160 DNDGRSVKVPGERVIHRHGYNPKTMKRGKSPVQSLRDILGEQIEAAIFRAQMWRNGPRPGMVIMRDPESKAGKWDAESRT 239 (423) T ss_pred CCCceEEEEcccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcccCccCCHHHHH Confidence 457788899999999999776655 689999999999999999999999999999999999997653 57899999 Q ss_pred HHHHHHHHHhcc--cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHHHHHHH Q lcl|Aclame:pro 218 RARQEFEKMREG--SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMED 293 (406) Q Consensus 218 ~~~~~~~~~~~g--~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~~~~~~ 293 (406) +++++|++.+++ .++|++++|++|++|++++++++|+||+|++++++++||++|||||.+||. .++++|+|++.+. T Consensus 240 ~~~~~~~~~~~~~~~n~g~~~vl~~g~~~~~l~~s~~d~q~~e~~~~~~~eIa~~fgVPp~~lg~~~~~t~sn~e~~~~~ 319 (423) T protein:vir:81 240 RFMANLRASFSPKSSDVGGTLLLEDGMKAENFHTTSKDEQTVETTKLSLQTVAQVYGINPTMVGQLDNANYSNVREFRKA 319 (423) T ss_pred HHHHHHHHHhccccccCCcceecCCCceEEeccCChhhHHHHHHHHhhHHHHHHHhCCCHHHhcCCCCCCcccHHHHHHH Confidence 999999999854 577899999999999999999999999999999999999999999999996 4578999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhccCccch--hhhhhhhcc----cchhHHHHHHHHHHHh-CCCcCHHHHHHHhCCCCCCCC Q lcl|Aclame:pro 294 YVTNDLPFYFDAITSELGLKTLNDKDR--RLYHIEFDT----RSVTGRNVDEIVKLVN-NQILTPNQGLVELGKQKSTDP 366 (406) Q Consensus 294 ~~~~~i~P~~~~ie~~l~~~l~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~-~g~~t~NE~R~~~g~~p~~~~ 366 (406) |+++||.|++++||++|+++|++..+. ..++++|+. +.|.+++++.+.+++. .||+|+||+|+++|+||+ | T Consensus 320 f~~~~L~P~~~~ie~~l~~~L~~~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~l~~~G~~T~NE~R~~~gl~p~--~ 397 (423) T protein:vir:81 320 LYGDNLGSWIRIIQDVMNLFLLPRVGIDNEKFYFEFNLEEKLRASFEEAAEIKRAAVGNVAWMTINEVRAMDNLPSI--D 397 (423) T ss_pred HHHHHHHHHHHHHHHHHhhhhcCccccccCccEEEecchhhhccCHHHHHHHHHHHHhCCCCcCHHHHHHHhCCCCC--C Confidence 999999999999999999999987653 456677764 5677888888888874 699999999999999999 6 Q ss_pred CCCeeeeccCccchhhccccccccCcccCCCccCCC Q lcl|Aclame:pro 367 NMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAE 402 (406) Q Consensus 367 ~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~ 402 (406) |||++++|.|+.+.+..+. .||+.+. T Consensus 398 gGD~~~~p~n~~~~~~~~~----------~~~~~~t 423 (423) T protein:vir:81 398 GGDDLARPLNTEFGDSEDA----------PGEEVET 423 (423) T ss_pred CcceeecccccccCccCCC----------CCCCCCC Confidence 7999999999987653221 1111111 No 43 >protein:vir:6210 Length: 394 # NCBI annotation: Portal protein # Family: family:all:10882 # MgeID: mge:128 # MgeName: phBC6A52 # Cross-refs: genbank:acc:NP_852590;genbank:gi:31415850;genbank:GeneID:1489208 Probab=100.00 E-value=3.1e-86 Score=489.38 Aligned_cols=381 Identities=16% Similarity=0.127 Sum_probs=318.7 Q ss_pred CcccccccC---CCCcchhhHHHhhcCC---cccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHH Q lcl|Aclame:pro 1 MSFFQPLGT---SKVSYDDYISSVLAGD---VSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINY 74 (406) Q Consensus 1 M~~f~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~ 74 (406) ||||+++.. +......++..++++. .+..++..+++++++|++||++||++||+|||++++++++....|++.. T Consensus 1 MGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vt~~~al~~~~v~~~i~~Ia~~iA~lp~~v~~~~g~~~~~~~~~~ 80 (394) T protein:vir:62 1 MGLRDRFSNYLFKKAEKRGYLDNVLGKSIRYSGVYVTDSNILQSSDVYELLQDISNQMVLADIVVEDEFGNEIKDDIALQ 80 (394) T ss_pred CchhhhhhhhccCCCCchhhhhhhhhcccccCccccChhhhhccHHHHHHHHHHHHhhcccceEEEcCCCcccchhhHHH Confidence 999876542 2223334455444443 3345888999999999999999999999999999998888777777766 Q ss_pred HhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcc Q lcl|Aclame:pro 75 LLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFA 154 (406) Q Consensus 75 lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~ 154 (406) || .+||++||+++||+.++.+++++||+|+++.++. ..+ +..+.+..++.+... +. .. .++|++ T Consensus 81 Ll-~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~~-----~~~----~~~~~~~~~~~~~~~--~~--~~--~~~~~~ 144 (394) T protein:vir:62 81 IL-RNPNNYLTQSEFIKLMTNTYLLEGETFPILNGAQ-----IHL----ASNVFTELDDNLVEH--FN--IG--GHEIPP 144 (394) T ss_pred Hh-ccCCCCCCHHHHHHHHHHHHHhcCCeEEEEecce-----eec----cccceEEECCceEEE--Ee--eC--CEEech Confidence 55 6999999999999999999999999999987642 222 234555555554332 22 12 367999 Q ss_pred eeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCC--HHHHHHHHHHHHHHhcc-cc Q lcl|Aclame:pro 155 HDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLS--GDARQRARQEFEKMREG-SV 231 (406) Q Consensus 155 ~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~g-~~ 231 (406) ++|+|+|+++.++++|+||+..+..+|..+.++.++..++|+||++|+++++.+...+ ++++++++++|++.++| .+ T Consensus 145 ~eiih~r~~~~d~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~g~~n 224 (394) T protein:vir:62 145 CMIRHVKNIGADHLRGKGILDLGRDTLEGVMSAEKTLTDKYKKGGLLTFLLNLDAHINPQNGAQSKLINAILDQLESIDE 224 (394) T ss_pred hheEEecCcCCCCccccChHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCcCHHHHHHHHHHHHHHhccccc Confidence 9999999988899999999999999999999999999999999999999999988765 55689999999999988 67 Q ss_pred cCceeeccCCc--eeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 232 GGSPLVFDSTM--EYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSE 309 (406) Q Consensus 232 ~~~~~vl~~g~--~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~ 309 (406) +|+++|++.|. ++++++.++.|+|++|.+++++++||++|||||.+||.. +++|++++.+.|+++||.|++++||++ T Consensus 225 ~g~~~vl~~g~~~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~-~~sn~e~~~~~~~~~~l~P~~~~ie~~ 303 (394) T protein:vir:62 225 ARSVKMIPLGKGYSIDTLKSPLDDEKTLAYLNVYKKDLGKFLGINVDTYTEL-IKEDIEKAMMYIHNKAVRPIMKNFEDH 303 (394) T ss_pred cCceeEeeCCCceeEEecCCCcchHHHHHHHHHHHHHHHHHhCCCHHHcCCC-CCcCHHHHHHHHHHHHHHHHHHHHHHH Confidence 78888887765 666889999999999999999999999999999999854 578999999999999999999999999 Q ss_pred HHhhccCccchhhhhhhhcccch--hHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccc Q lcl|Aclame:pro 310 LGLKTLNDKDRRLYHIEFDTRSV--TGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQ 387 (406) Q Consensus 310 l~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~ 387 (406) |+++|+++.++..++++|+.... ...+++++.+++++|++|+||+|+++|+||+++|+||++++++|++|++.... T Consensus 304 l~~kll~~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~~g~~T~NE~R~~~gl~p~~~~~gd~~~~~~n~~~~~~~~~-- 381 (394) T protein:vir:62 304 LSLLFYAQNSGKRIKFKINILDFVTYSNKTNIGYNLVRTAITSPDNVADMLGFPKQNTKESQAIYISNDVTEIGKKEA-- 381 (394) T ss_pred HhhhhcCccccCceEEEechhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeccccccccccccc-- Confidence 99999998887778888876443 44677888999999999999999999999999999999999999999875432 Q ss_pred cccCcccCCCccCCC Q lcl|Aclame:pro 388 DKVGIKGKGGEVNAE 402 (406) Q Consensus 388 ~~~~~~~~gg~~~~~ 402 (406) ...+.||||+|++ T Consensus 382 --~~~~~kgge~~en 394 (394) T protein:vir:62 382 --TDGSLGGGEENEN 394 (394) T ss_pred --ccccCCCCCCCCC Confidence 3456788887777 No 44 >protein:vir:94666 Length: 723 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1527 # MgeName: mu1/6 # Cross-refs: genbank:acc:YP_579205;genbank:gi:93007441;genbank:GeneID:5076785 Probab=100.00 E-value=1.2e-85 Score=486.13 Aligned_cols=396 Identities=14% Similarity=0.123 Sum_probs=318.8 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKS 80 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~P 80 (406) |+=|..- .+.+ ..| +......++...++++++||+||++||++||++||++|+.+++....|++.++|+.+| T Consensus 1 ~~~~~~~------~g~~-~~~-~~~~~~~~~~~~~~~~~~V~acV~~Ia~~iA~lpl~l~~~~~~~~~~~~l~~lL~~~P 72 (723) T protein:vir:94 1 MTTFPSG------AGGW-NAW-SADSVFGNGAKGWSNSAVAYRCISMLANNAASVDLVVRGPDGELDELHPLSQLWNVMP 72 (723) T ss_pred CcccccC------CCcc-ccc-cccccccccHHHHhhhHHHHHHHHHHHHhhccceeEEEcCCCccchhhHHHHHHhhCC Confidence 4322211 1111 111 1223344566778999999999999999999999999998888888899999999999 Q ss_pred cccCCHHHHHHHHHHHHHhcCCceEEEEecC--CCceeEEEeecCCeeEEEEEccCcceE------EEEEeecCCeEEEE Q lcl|Aclame:pro 81 TSNASARTWKFAMAVNAILTGNSFSRILRDP--KTNQALQFQFYRPSETTVEETDNHEIV------YTFTDMLTAKQVKC 152 (406) Q Consensus 81 n~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~--~~g~~~~l~~l~p~~~~~~~~~~g~~~------~~~~~~~~g~~~~~ 152 (406) |++||+++||+.++.+++++||+|++++++. ..|.|.+++|++|+.+.+.....+... .+.....+|..+.+ T Consensus 73 N~~~t~~~f~~~~~~~lll~Gnay~~i~r~~r~~~g~p~~l~~l~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~G~~~~~ 152 (723) T protein:vir:94 73 NRAMPAQVLKALSMTRLQLDGQCHLWLNYNGRTPAGVPDEIWYVYDRVTTIVATRAADAVPQAQIIGYVIERTDGVRVPV 152 (723) T ss_pred CCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCccccceeEEEEecCcceEEeecCCCccceeeeeeEEEEEecCceeEEe Confidence 9999999999999999999999999999753 458999999999988887665554321 12234567888899 Q ss_pred cceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc-c Q lcl|Aclame:pro 153 FAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG-S 230 (406) Q Consensus 153 ~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g-~ 230 (406) ++++|||||.+ +.++++|+||+.++..+|..+.++.++..++|+||++|++++..+ .+++++.++++++|++.++| . T Consensus 153 ~~~dIiHir~~~~~dg~~G~Spi~~a~~~i~~~~aa~~~~~~~f~NG~~p~giL~~~-~l~~e~~~~~~~~~~~~~~G~~ 231 (723) T protein:vir:94 153 LADEMLWLRFSDPYDPLAVMAPWKAARAAVDADFYAATWQRQSFKNGARPGGVVNLG-DMDEQTFTKTVAAFRSQVEGVQ 231 (723) T ss_pred cccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcC-CCCHHHHHHHHHHHHHHhhchh Confidence 99999999976 578999999999999999999999999999999999999999975 68999999999999999988 6 Q ss_pred ccCceeecc----------CCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHH Q lcl|Aclame:pro 231 VGGSPLVFD----------STMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLP 300 (406) Q Consensus 231 ~~~~~~vl~----------~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~ 300 (406) |+|+++||+ .|++|++++++++|+||+|++++++++||++|||||.+||..++++|++++.+.|+++||. T Consensus 232 Nagk~~vL~g~~~~~~vl~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~i~~~st~sN~e~~~~~f~~~tL~ 311 (723) T protein:vir:94 232 NAGRHLLIAGQGSDGGAAGKGATFTSLSMSPAEMDYINSRMHSAEEVMLAFGIRKDALLGGSTYENQAEAKAAVWTETLI 311 (723) T ss_pred hcCcceeecccccccccccCCceEEEccCCHHHHHHHHHHHHhHHHHHHHhCCChhHcCCCCCcccHHHHHHHHHHHHHH Confidence 889998885 5999999999999999999999999999999999999999888999999999999999999 Q ss_pred HHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeecc- Q lcl|Aclame:pro 301 FYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSL- 375 (406) Q Consensus 301 P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~- 375 (406) ||++.||++|+++|++..+ ..++++|+. +.|.+++++.+..++++|++|+||+|+++|+||+++++|+.++.|. T Consensus 312 P~~~~ie~~ln~~Ll~~~g-~~~~~~f~~~~lLr~D~~~r~~~~~~~v~~G~~T~NE~R~~lglpPi~gGd~~~~~~p~~ 390 (723) T protein:vir:94 312 PQMEVMASITDLQLLPDIG-WTVEWDFNSVPALQEDLEAQAGRNQGYLVNDVLMVDEVRATIGLDPLPGGIGQMTLTPYR 390 (723) T ss_pred HHHHHHHHHHhHhhccccc-CceEEeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCcccceecccc Confidence 9999999999999997543 345667753 5788999999999999999999999999999999887777777775 Q ss_pred -CccchhhccccccccC------------------cccCC-----Ccc-CCCCCCC Q lcl|Aclame:pro 376 -NYVFLDKKEEYQDKVG------------------IKGKG-----GEV-NAEEDKS 406 (406) Q Consensus 376 -n~~~~~~~~~~~~~~~------------------~~~~g-----g~~-~~~~~~~ 406 (406) +++|.+.......... .+.++ -+. .+.+++. T Consensus 391 ~~~a~~~~~~p~~~e~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 446 (723) T protein:vir:94 391 AQFAPAPAPAPAVEEGAARMLALLERVAADRPLPELPVRATTVLHHDPGPDPQQTL 446 (723) T ss_pred ccccCCCCCCccchhhhHhhhhhccccccccCcCCCCCCCCCCCCCCcccCCchhH Confidence 4444332111000000 00000 000 1111111 No 45 >protein:vir:3843 Length: 397 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:322 # MgeName: phi adh # Cross-refs: genbank:acc:NP_050149;swissprot:trembl:q9t1f8;genbank:gi:9633041;uniprot:Q9T1F8;genbank:GeneID:1262206 Probab=100.00 E-value=1.7e-84 Score=479.85 Aligned_cols=381 Identities=21% Similarity=0.266 Sum_probs=317.1 Q ss_pred CcccccccCCCC--cc--hhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHh Q lcl|Aclame:pro 1 MSFFQPLGTSKV--SY--DDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLL 76 (406) Q Consensus 1 M~~f~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL 76 (406) |+||++.++... +. ..|+..+.++..+..++..+||++++|++||++||++||++|+++. ++..++| T Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~V~~~v~~ia~~ia~~p~~~~---------~~~~~~l 71 (397) T protein:vir:38 1 MPLLKLNKSHSQGFSLNDPDWVNFLTGGEAQKYVSADTALKNSDIFSLIMQLSGDLAMVRYTSE---------SDRSQSI 71 (397) T ss_pred CcchhhhhcccCcccCCchhhhhhhcCCcCCceechHHhhccHHHHHHHHHHHHHHhhCccccc---------ccHHHHH Confidence 999987544322 22 2344444555567789999999999999999999999999999753 4567788 Q ss_pred hhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc-eEEEEEe--ecCCeEEEEc Q lcl|Aclame:pro 77 NVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE-IVYTFTD--MLTAKQVKCF 153 (406) Q Consensus 77 ~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~-~~~~~~~--~~~g~~~~~~ 153 (406) +.+||++||+++||+.++.+++++||||++++++ ..|.+++++|++|+.+++..+.+|+ +.|.+.. ...+..+.++ T Consensus 72 ~~~PN~~~s~~~f~~~~~~~lll~Gna~~~i~r~-~~g~~~~l~~l~~~~v~i~~~~~~~~~~y~~~~~~~~~~~~~~~~ 150 (397) T protein:vir:38 72 ISNPSVTANGYSFWQGMFAQLLLDGNCYAYRHKN-TNGVDLSWEYLRPSQVQPMLLQDGSGLIYNINFDEPAIGYMENVP 150 (397) T ss_pred HhcCCCCCCHHHHHHHHHHHhhhcCCEEEEEEEC-CCCcEEEEEEEcCceeEEEEcCCCceEEEEEEeccccccceeEec Confidence 8999999999999999999999999999999998 5589999999999999998877764 4454443 3456678899 Q ss_pred ceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhccccc Q lcl|Aclame:pro 154 AHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVG 232 (406) Q Consensus 154 ~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~ 232 (406) +++|||+|+++.++ ++|.||+.++..+|..+.++.++..++|+||+.|+++++.+..+++++.+++++.|+..+++.|+ T Consensus 151 ~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~e~~~~~~~~~~~~~~~~n~ 230 (397) T protein:vir:38 151 AADVIHIRLLSKNGGKTGISPLSALINEQQIKDASNELTLKALKQSVTASAVLTIQKGGLLDAETRIARSKEISKQIHNS 230 (397) T ss_pred CccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHHHHHHHHHhccccc Confidence 99999999887665 78999999999999999999999999999999999999999999999999999999999998899 Q ss_pred CceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccccc-chhHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 233 GSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSP-NQSVAQLMEDYVTNDLPFYFDAITSELG 311 (406) Q Consensus 233 ~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~-~~n~~~~~~~~~~~~i~P~~~~ie~~l~ 311 (406) ++++++++|++|++++.++.|+||++.+++.+++||++|||||.+||...+ ++|.+ +...|++.||.|++++||++|+ T Consensus 231 ~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~afgVp~~~lg~~~~~~~~~e-~~~~~~~~~l~P~~~~ie~~ln 309 (397) T protein:vir:38 231 DGPVVIDALEDYKPLEVKGNIASLLNQVDWTRDQIAKVYGVPDSYLNGQGDQQSSIT-QISGQYAKSLNRYVQAIVGELN 309 (397) T ss_pred CCceecCCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccHHH-HHHHHHHHHHHHHHHHHHHHHH Confidence 999999999999999999999999999999999999999999999997543 45555 5577889999999999999999 Q ss_pred hhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccC Q lcl|Aclame:pro 312 LKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVG 391 (406) Q Consensus 312 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~ 391 (406) ++|++..+ +.+++.++.+.+++++.+.+++++|++|+||+|+++|++|+ ++||.+.......+.... T Consensus 310 ~~l~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~G~~t~nE~R~~lg~~p~--~~~d~~~~~~~~~~~~~~-------- 376 (397) T protein:vir:38 310 DKLHANIS---ANIRFAIDAMGDQYASTISSSVKGGTIAGNQARFILQNSGY--LAKDLPDPEKEPQQAIQL-------- 376 (397) T ss_pred HhccChhc---ccccccccCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCccccccccccccccc-------- Confidence 99998654 46677888999999999999999999999999999999999 557755444333322111 Q ss_pred cccCCCcc-------CCCCCC Q lcl|Aclame:pro 392 IKGKGGEV-------NAEEDK 405 (406) Q Consensus 392 ~~~~gg~~-------~~~~~~ 405 (406) ...+||++ .+++++ T Consensus 377 ~~~~~g~~~~~~~~e~~~~~~ 397 (397) T protein:vir:38 377 IQQEGGENDGNNSDERGSDPE 397 (397) T ss_pred cccccCCCCCCCCCCCCCCCC Confidence 11122221 111111 No 46 >protein:vir:80134 Length: 403 # NCBI annotation: Phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1877 # MgeName: bacteriophage bv1 # Cross-refs: genbank:acc:YP_001425602;genbank:gi:155042935;genbank:GeneID:5469563 Probab=100.00 E-value=4.5e-84 Score=477.54 Aligned_cols=385 Identities=17% Similarity=0.217 Sum_probs=314.9 Q ss_pred CcccccccCCCCcch-hhHHHhhcCCc--ccccchh-hhhccHHHHHHHHHHHHhhccceeEEEec--CCcccccchHHH Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYD-DYISSVLAGDV--SQKYLGV-SALKNSDILTATSIIAGDIARFPLVKKDV--NGDIIHDEDINY 74 (406) Q Consensus 1 M~~f~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~-~a~~~~~v~~~i~~ia~~ia~~~~~~~~~--~~~~~~~~~~~~ 74 (406) ||||++++++..+.. .....+..+.. ....... .+..+|+||+||++||++||++|+++|+. ++.....|++.+ T Consensus 1 Mg~~~~f~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~I~~ia~~iA~~p~~~~~~~~~g~~~~~~~~~~ 80 (403) T protein:vir:80 1 MGLFNFFRRKTRSEPTNAISWFLTQEAYDTLAIPGYTRLSDNPEVRMAVHKIAELISSMTIHLMQNTDNGDIRIKNELSR 80 (403) T ss_pred CcccccccccccccccchhhhhcccccccccccchhhhhhhhHHHHHHHHHHHHhhhhCceEEEEecCCceeecCChHHH Confidence 999987655432211 11222222221 1112222 34568999999999999999999999975 344556889999 Q ss_pred HhhhhccccCCHHHHHHHHHHHHHhc--CCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEE Q lcl|Aclame:pro 75 LLNVKSTSNASARTWKFAMAVNAILT--GNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKC 152 (406) Q Consensus 75 lL~~~Pn~~~~~~~f~~~~~~~~~l~--G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~ 152 (406) +|+.+||++||+++||+.+++++++. ||||+++.++ ..|+|.+|||++|+.|++..+.+|..+ +|. ...+ T Consensus 81 lL~~~PN~~~t~~~f~~~~v~~~ll~~~Gna~i~~~~~-~~g~~~~L~~l~p~~v~~~~~~~g~~~-~y~------~~~~ 152 (403) T protein:vir:80 81 KIDINPYSLMTRKAWMYNIVYTMLLDGEGNSVVFPKYT-TSGLIDELIPLAPSKVSFVDTDTGYQI-WYQ------GKAY 152 (403) T ss_pred HHhccCCcCCCHHHHHHHHHHHHhhcCCccEEEEEEEc-CCCcEEEEEEEcCCeeEEEEcCCceEE-EEe------eccc Confidence 99999999999999999999999985 7789999987 458999999999999999888877433 221 2468 Q ss_pred cceeeEeecc--CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc- Q lcl|Aclame:pro 153 FAHDVIHWKF--FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG- 229 (406) Q Consensus 153 ~~~~vih~r~--~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g- 229 (406) ++++|+||+. ++.++++|+||+..+..++..+.++.++..++|+||+.|++++..+..+++++.++.+++|.+.+.| T Consensus 153 ~~~eiih~~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (403) T protein:vir:80 153 NYDEVLHFIVNPDPEKPYMGRGYRVVLKDIVNNLKQATTTKKSFMSGKYMPSLIVKVDAATAELSSEEGRNAVFKKYLEA 232 (403) T ss_pred chhhEEEEeccCCCcCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCChHHHHHHHHHHHHHHhhh Confidence 9999999994 4667899999999999999999999999999999999999999999999999999999999999866 Q ss_pred cccCceeeccCC-ceeeecc-CChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 SVGGSPLVFDST-MEYTPLE-IDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAIT 307 (406) Q Consensus 230 ~~~~~~~vl~~g-~~~~~l~-~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie 307 (406) .++|++++++.+ .++.++. +++.|+|++|.+++++.+||++|||||++||... +.++....|+++||.|++++|| T Consensus 233 ~~~g~~~~~~~~~~~~~~~~~l~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~---~~~~~~~~f~~~~l~P~~~~ie 309 (403) T protein:vir:80 233 SEAGQPWIIPAELLDVEQVKPLSLKDLAIHETVELDKRTVAGIFGVPAFLLGVGK---YDKDEYNNFINSTILPIAKGIE 309 (403) T ss_pred hhcCCeeeecccccccceeccCCHHHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC---ccHHHHHHHHHHHHHHHHHHHH Confidence 577888888665 4566554 5789999999999999999999999999998532 2245567899999999999999 Q ss_pred HHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhc Q lcl|Aclame:pro 308 SELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKK 383 (406) Q Consensus 308 ~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~ 383 (406) ++|+++|++..+ ++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++++|++|++.. T Consensus 310 ~~l~~kll~~~~---~~~~f~~~~ll~~d~~~~~~~~~~~~~~Gi~t~NE~R~~~gl~p~--~ggd~~~~~~n~~pl~~~ 384 (403) T protein:vir:80 310 QELTRKLLISPD---LYFKFNPRSLYAYDLKELAEVGSNMYVRGLMEGNEVRDWLGLSPK--EGLSELVILENYIPLDKI 384 (403) T ss_pred HHHHHhccCCCC---cEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCeEeecccccchhhc Confidence 999999998765 3566664 4578899999999999999999999999999999 669999999999999865 Q ss_pred cccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 384 EEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 384 ~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) .+ .+..||||+++.++|+ T Consensus 385 ~~-----~~~~k~ge~~~~~~~~ 402 (403) T protein:vir:80 385 GD-----QNKLKGGEKGGADGQT 402 (403) T ss_pred cc-----hhhccCCCCCCCCCCC Confidence 54 2345677777777777 No 47 >protein:vir:95378 Length: 406 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1567 # MgeName: GBSV1 # Cross-refs: genbank:acc:YP_764474;genbank:gi:115334628;genbank:GeneID:5179265 Probab=100.00 E-value=2.1e-83 Score=473.86 Aligned_cols=385 Identities=16% Similarity=0.206 Sum_probs=319.6 Q ss_pred CcccccccC---C-C-CcchhhHHHhhcCCc--ccccchhhhhccHHHHHHHHHHHHhhccceeEEEecC--Ccccccch Q lcl|Aclame:pro 1 MSFFQPLGT---S-K-VSYDDYISSVLAGDV--SQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVN--GDIIHDED 71 (406) Q Consensus 1 M~~f~~~~~---~-~-~~~~~~~~~~~~~~~--~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~--~~~~~~~~ 71 (406) ||||+++.. + . .....+...+..+.. ...+....++++++|++||++||++||++||++|+.+ +.....|+ T Consensus 1 Mg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~ 80 (406) T protein:vir:95 1 MGLFDRWRRTKRKSKIRADTGYVGLFMSGEDVSFLVPGYVRLSDNPEVRMAVHKIADLISSMTIYLMQNTEDGDIRIRNE 80 (406) T ss_pred CcchhhhccccccccccccchhhhhhccCcccCccccCHHHHhhcHHHHHHHHHHHHhhccCceEEEEecCCcceeecch Confidence 999976532 1 1 122222222322222 2345567789999999999999999999999999754 34556788 Q ss_pred HHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEE--EEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeE Q lcl|Aclame:pro 72 INYLLNVKSTSNASARTWKFAMAVNAILTGNSFSR--ILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQ 149 (406) Q Consensus 72 ~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~--i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~ 149 (406) +.++|+.+||++||+++||+.++.+++++|++|++ +.++ ..|+|+++||++|+.|++..+.+| |.+.. ++ T Consensus 81 ~~~~l~~~PN~~~t~~~f~~~~~~~~ll~g~g~a~~~~~~~-~~g~~~~l~~i~~~~v~~~~~~~~---~~~~~--~~-- 152 (406) T protein:vir:95 81 LSRKIDITPYSLMTRKSWMYNIVYTMLLDGEGNSVVFPKYT-ADGLIDELVPLTPSKVNFLDTPDG---YQVLY--GG-- 152 (406) T ss_pred HHHHHhhccCCCCCHHHHHHHHHHHHHhcCCceEEEEEEEC-CCCcEEEEEEEcCceeEEEEcCCe---EEEEe--cc-- Confidence 99999999999999999999999999999877555 5565 458999999999999999888765 22221 22 Q ss_pred EEEcceeeEeecc--CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHh Q lcl|Aclame:pro 150 VKCFAHDVIHWKF--FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMR 227 (406) Q Consensus 150 ~~~~~~~vih~r~--~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 227 (406) ..|++++|||+|+ ++.++++|.||+.++..++..+.++.++..++|+||+.|++++..++.+++++.++++++|.+.+ T Consensus 153 ~~~~~~evih~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~l~~e~~~~~~~~~~~~~ 232 (406) T protein:vir:95 153 QTFNYDEVLHFIYNPDPERPYIGRGYRVVLKDIADNLKQATATKKSFMSGKYMPSLIVKVDAATAELSSEEGRNAVFKKY 232 (406) T ss_pred EEEchhHEEEeeccCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHh Confidence 4689999999995 35678999999999999999999999999999999999999999999999999999999999999 Q ss_pred cc-cccCceeecc-CCceeeecc-CChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 228 EG-SVGGSPLVFD-STMEYTPLE-IDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFD 304 (406) Q Consensus 228 ~g-~~~~~~~vl~-~g~~~~~l~-~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~ 304 (406) +| .++++++|+. +|.+++++. ++++|+|++|.+++++++||++|||||++||... +.+++...|+++||.|+++ T Consensus 233 ~g~~n~~~~~v~~~~~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~~---~~~~~~~~~~~~~l~P~~~ 309 (406) T protein:vir:95 233 LQATEAGQPWIIPAELLEVEQVKPLSLKDIAINEAVELDKRTVAGMFGVPAFLLGIGE---FNRDEYNNFINSTILPIAK 309 (406) T ss_pred ccccccCCceeecCCCccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCC---chHHHHHHHHHHHHHHHHH Confidence 88 5778887775 456777765 6899999999999999999999999999998542 3578889999999999999 Q ss_pred HHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccch Q lcl|Aclame:pro 305 AITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFL 380 (406) Q Consensus 305 ~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~ 380 (406) +||++|+++|++..+ ++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++|+|++|+ T Consensus 310 ~ie~~l~~~l~~~~~---~~~~fd~~~l~~~d~~~~~~~~~~l~~~G~~t~NE~R~~~gl~p~--~~gd~~~~~~n~~~~ 384 (406) T protein:vir:95 310 GIEQELTRKLLISPD---LYFKFNPRSLYAYDLKELAEVGSNMYVRGIMEGNEVRDWLGLSPK--EGLSELVILENYIPL 384 (406) T ss_pred HHHHHHHHhcCCCCC---cEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcceeeeccCccch Confidence 999999999998655 3455654 4568889999999999999999999999999999 669999999999999 Q ss_pred hhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 381 DKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 381 ~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) +.... ....|||+++++++++ T Consensus 385 ~~~~~-----~~~~k~g~~~~~~~~~ 405 (406) T protein:vir:95 385 DKIGD-----QSKLKGGDNSGADGQT 405 (406) T ss_pred hhccc-----ccccCCCCCCCCCCCC Confidence 86553 3345778888888888 No 48 >protein:vir:8100 Length: 466 # NCBI annotation: gp4 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817681;genbank:gi:29566112;genbank:GeneID:1259306 Probab=100.00 E-value=2.1e-83 Score=473.86 Aligned_cols=394 Identities=12% Similarity=0.067 Sum_probs=318.4 Q ss_pred CcccccccCCCCcc---------------------------hhhHHHhhcCC-------cccccchhhhhccHHHHHHHH Q lcl|Aclame:pro 1 MSFFQPLGTSKVSY---------------------------DDYISSVLAGD-------VSQKYLGVSALKNSDILTATS 46 (406) Q Consensus 1 M~~f~~~~~~~~~~---------------------------~~~~~~~~~~~-------~~~~~~~~~a~~~~~v~~~i~ 46 (406) ||||+++.+...+. .+.+..++.|. .+..++...++++++||+||+ T Consensus 1 M~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~~~a~~~~~v~~~i~ 80 (466) T protein:vir:81 1 MRLIDRLLSTRGAAPRMSIDDYAQMLNEFAFNGIGYGFGGGVPRIQQTLAGPSTELAPDTFVGLATQAYQANGPVFACML 80 (466) T ss_pred CchhHHHhhccCcccccchhhhhhhhhhhhccccccccccccHHHHHhhccccccccCccccccchhhhhccHHHHHHHH Confidence 99998754432110 11233333332 234578888999999999999 Q ss_pred HHHHhhccceeEEEecCCc--ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC-------CceeE Q lcl|Aclame:pro 47 IIAGDIARFPLVKKDVNGD--IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK-------TNQAL 117 (406) Q Consensus 47 ~ia~~ia~~~~~~~~~~~~--~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~-------~g~~~ 117 (406) +||++||+||+++++.+.. ....++..+.|+.+||++||+++||+.++.+++++||+|++++++.. .|.++ T Consensus 81 ~Ia~~ia~lp~~~~~~~~~~~~~~~~~~~~~L~~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~g~l~~~~~g~~~ 160 (466) T protein:vir:81 81 VRQLVFSSVRFRWQRLRDGKPSDTFGSRDLQILETPWKGGTTQDMLSRMIQDADLAGNSYWTIVDGEFVRMRPDWVDVVV 160 (466) T ss_pred HHHHhhccCceEEEEecCCceeeccccHHHHHhhCCCCCCCHHHHHHHHHHHHHhcCCeEEEEEecCccccccccCccee Confidence 9999999999999976422 22333344555579999999999999999999999999999998643 36799 Q ss_pred EEeecCCeeEEEEEccCcceEEEEEeecC-----CeEEEEcceeeEeeccC--CCCCccccCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 118 QFQFYRPSETTVEETDNHEIVYTFTDMLT-----AKQVKCFAHDVIHWKFF--SHDTILGRSPLLSLGDEIDLQTGGINT 190 (406) Q Consensus 118 ~l~~l~p~~~~~~~~~~g~~~~~~~~~~~-----g~~~~~~~~~vih~r~~--~~~~~~G~s~~~~~~~~i~~~~~~~~~ 190 (406) +++|++|+.+++..+.++...+.|....+ +..+.+++++|||||.+ +.++++|+||+.+++++|..+.++.++ T Consensus 161 ~l~~l~~~~v~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~dviHir~~~~~~d~~~G~s~i~~~~~~i~~~~a~~~~ 240 (466) T protein:vir:81 161 EERMVRGGRGELGGGQLGWRKVGYLYTEGGRQSGNESVGFLAEDVVHFAPIPDPLASYRGMSWLTPILREIRADQAMSKH 240 (466) T ss_pred EEEEecCcceEEEEcCCCceEEEEEEEecCcccccceeeeccccEEEEcCCCCcccccccccHHHHHHHHHHHHHHHHHH Confidence 99999999999999888765544443333 34578999999999964 578899999999999999999999999 Q ss_pred HHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 191 LIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAK 269 (406) Q Consensus 191 ~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~ 269 (406) ..++|+||+.|+++++.++.+++++.+++++.|++.++| .|+|+++||++|++|++++.++.|+||+|++++++++||+ T Consensus 241 ~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~ 320 (466) T protein:vir:81 241 QAKFFDNGATVNLVIKHNPMADPAAVKKWADEVNSKHAGVDNAWKNLNLYPGADADVVGSNLQEIDFKNVRGGGETRIAA 320 (466) T ss_pred HHHHHhcCCCcceEEecCCCCCHHHHHHHHHHHHHHhcCccccccceEcCCCceEEEccCChhHHHHHHHHHHHHHHHHH Confidence 999999999999999999999999999999999999988 5789999999999999999999999999999999999999 Q ss_pred HhcCCHHHhcc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhccc----chhHHHHHH- Q lcl|Aclame:pro 270 ALRVPSYKLGV-----NSPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTR----SVTGRNVDE- 339 (406) Q Consensus 270 ~fgvpp~~lg~-----~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~- 339 (406) +|||||++||. .++++|+|++.+.|+++||.|++++||++|+++|++..++..++++|+.. .|.+++++. T Consensus 321 ~fgVPp~~lG~~~~~~~st~sn~eq~~~~f~~~tl~P~~~~ie~~l~~~L~~~~~~~~~~~~f~~~~llr~d~~~r~~~~ 400 (466) T protein:vir:81 321 AAGVPPVIVGLSEGLAAATYSNYGQARRRLADGTAHPLWQNLSGCIGHVMPDMGPDVRLWYDADDVPFLREDEKDAADIQ 400 (466) T ss_pred HhCCCHHHcccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccCcceEEEecchhhhccCHHHHHHHH Confidence 99999999984 35788999999999999999999999999999999988777778888754 455655543 Q ss_pred ------HHHHHhCCCcCHHHHHHHhCCCCCCCCCCCee-eeccCccchhhccccc----cccCcccCCCccCCC Q lcl|Aclame:pro 340 ------IVKLVNNQILTPNQGLVELGKQKSTDPNMDRY-QSSLNYVFLDKKEEYQ----DKVGIKGKGGEVNAE 402 (406) Q Consensus 340 ------~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~-~~~~n~~~~~~~~~~~----~~~~~~~~gg~~~~~ 402 (406) +..++++|+ |+||+|+. + ++||.. +.+.++.|++.....+ .......+|||+|++ T Consensus 401 ~~~~~~~~~~~~~g~-t~nE~r~~-----~--~~gd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gg~~ngn 466 (466) T protein:vir:81 401 KVRAETINTLITAGY-EPESVVAA-----V--NSGDLRLLKHTGLTSVQLLPPGVSASASSDTPTSGGADDNGN 466 (466) T ss_pred HHHHHHHHHHHHcCC-Chhhcccc-----c--cCCccccccCCCcchhhhcccccccccCCCCcccCCCCcCCC Confidence 566788896 99999964 3 346654 4556666666443222 222334567777777 No 49 >protein:vir:104259 Length: 403 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1504 # MgeName: T5 # Cross-refs: genbank:acc:YP_006980;genbank:gi:46401881;genbank:GeneID:2777676 Probab=100.00 E-value=1.7e-83 Score=474.30 Aligned_cols=382 Identities=17% Similarity=0.164 Sum_probs=311.3 Q ss_pred CcccccccCCCCcchhhHHHhh----cCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEec-----CCcccccch Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVL----AGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDV-----NGDIIHDED 71 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~-----~~~~~~~~~ 71 (406) |||++|+.....+....+.... ........+.+.++++++||+||++||++||+||+++++. +++....|+ T Consensus 1 mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~v~~cv~~Ia~~ia~~p~~v~~~~~~~~~~~~~~~~~ 80 (403) T protein:vir:10 1 MGFKSWITEKLNPGQRIIRDMEPVSHRTNRKPFTTGQAYSKIEILNRTANMVIDSAAECSYTVGDKYNIVTYANGVKTKT 80 (403) T ss_pred CcchhhhhhccchhhhhhhcccccccccCCcccccHHHHHHHHHHHHHHHHHHHHHhhCceeEeecccccccccccccch Confidence 9999988765544333322221 1123344567788999999999999999999999999865 334456788 Q ss_pred HHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEE Q lcl|Aclame:pro 72 INYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVK 151 (406) Q Consensus 72 ~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~ 151 (406) ++++|+.+||++||+++||+.++.+++++||||+++.+ ..+++++|+.+++..+..+.+ +.+... .... T Consensus 81 l~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gnayi~~~~-------~~l~~l~~~~~~v~~~~~~~~-~~~~~~---~~~~ 149 (403) T protein:vir:10 81 LDTLLNVRPNPFMDISTFRRLVVTDLLFEGCAYIYWDG-------TSLYHVPAALMQVEADANKFI-KKFIFN---NQIN 149 (403) T ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEeC-------ceeEeecCcceEEEEcCCceE-EEEEec---Ccee Confidence 99999999999999999999999999999999987643 258999999999877655543 433322 2356 Q ss_pred EcceeeEeeccCC-----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHH Q lcl|Aclame:pro 152 CFAHDVIHWKFFS-----HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKM 226 (406) Q Consensus 152 ~~~~~vih~r~~~-----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 226 (406) +++++|+|||.++ .++++|+||+.++..+++.+.++.++..++|+||++|+++++.++.++++++++++++|++. T Consensus 150 ~~~~eiih~~~~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~~~~~~~~ 229 (403) T protein:vir:10 150 YRVDEIIFIKDNSYVCGTNSQISGQSRVATVIDSLEKRSKMLNFKEKFLDNGTVIGLILETDEILNKKLRERKQEELQLD 229 (403) T ss_pred ecccceEEecccccccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHH Confidence 8899999999543 37899999999999999999999999999999999999999999999999999999999999 Q ss_pred hcc-cccCceeeccCCceeeeccC--ChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 227 REG-SVGGSPLVFDSTMEYTPLEI--DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYF 303 (406) Q Consensus 227 ~~g-~~~~~~~vl~~g~~~~~l~~--~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~ 303 (406) ++| .|+|++++|++|++|+++++ ++.|+||+|.+++++++||++|||||.+||. ++++|++++.+.|+++||.||+ T Consensus 230 ~~g~~n~g~~~vl~~g~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~-~~~sn~e~~~~~f~~~tl~P~~ 308 (403) T protein:vir:10 230 YNPSTGQSSVLILDGGMKAKPYSQISSFKDLDFKEDIEGFNKSICLAFGVPQVLLDG-GNNANIRPNIELFYYMTIIPML 308 (403) T ss_pred hCCcccCcceeecCCCceeEEecccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCC-CCCcCHHHHHHHHHHHHHHHHH Confidence 988 57899999999999999985 5789999999999999999999999999984 4688999999999999999999 Q ss_pred HHHHHHHHhhccCccchhhhhhhhc----ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccc Q lcl|Aclame:pro 304 DAITSELGLKTLNDKDRRLYHIEFD----TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVF 379 (406) Q Consensus 304 ~~ie~~l~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~ 379 (406) ++||++|+++|... +.++++ ++.|.+++++++.+++++|++|+||+|+++|+||+++++||++++|.|++. T Consensus 309 ~~ie~~l~~~L~~~-----~~~d~~~~~~l~~D~~~~~~~~~~~~~~G~lT~NE~R~~~gl~pi~~~~~d~~~~p~n~~~ 383 (403) T protein:vir:10 309 NKLTSSLTFFFGYK-----ITPNTKEVAALTPDKEAEAKHLTSLVNNGIITGNEARSELNLEPLDDEQMNKIRIPANVAG 383 (403) T ss_pred HHHHHHHHHhcCce-----eeeccchhhhcccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCccccccccccccccc Confidence 99999999988431 222222 456789999999999999999999999999999999999999999999864 Q ss_pred hhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 380 LDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 380 ~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) ... +. ...+||+.++...-+ T Consensus 384 ~~~------~~-~~~e~~~~~~~~~g~ 403 (403) T protein:vir:10 384 SAT------GV-SGQEGGRPKGSTEGD 403 (403) T ss_pred ccc------cC-CCCcCCCCCCCcCCC Confidence 321 11 112222221111111 No 50 >protein:vir:960 Length: 413 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:19 # MgeName: bIL285 # Cross-refs: genbank:acc:NP_076614;genbank:gi:13095722;genbank:GeneID:920279 Probab=100.00 E-value=2.7e-83 Score=473.21 Aligned_cols=377 Identities=14% Similarity=0.191 Sum_probs=310.6 Q ss_pred CcccccccCCCCc---chhh---------HHHhhcCCcccccch-hhhhccHHHHHHHHHHHHhhccceeEEEecC--Cc Q lcl|Aclame:pro 1 MSFFQPLGTSKVS---YDDY---------ISSVLAGDVSQKYLG-VSALKNSDILTATSIIAGDIARFPLVKKDVN--GD 65 (406) Q Consensus 1 M~~f~~~~~~~~~---~~~~---------~~~~~~~~~~~~~~~-~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~--~~ 65 (406) |+||+++++.... .... ...+... ..... ..++++++|++||++||++||++||++++.+ ++ T Consensus 13 m~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~cI~~ia~~ia~~~~~~~~~~~~~~ 89 (413) T protein:vir:96 13 LKFFNNKRSPTEESKAKDEIPKAPQVVMTLPNFFKE---LISDGYTKLSDSPEVRMAVDCIADLVSNMTIQLMQNGETGD 89 (413) T ss_pred CCccccCCCcchhhhhhccccccccccccchhhHhh---hccchhHHHhhchHHHHHHHHHHHhhccCceEEEEecCCCc Confidence 9999876432111 0000 0000000 01111 2367899999999999999999999998754 44 Q ss_pred ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeec Q lcl|Aclame:pro 66 IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDML 145 (406) Q Consensus 66 ~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~ 145 (406) ....|++.++|+.+||++||+++||+.++.+++++||+|++++++..++.+.+|||++|+.+++..+. +.+.|.+.. T Consensus 90 ~~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~r~~~g~~~~~L~~l~~~~v~~~~~~-~~~~y~~~~-- 166 (413) T protein:vir:96 90 KRIKNDLSRVVDIEPNKYLSRKTFIQWLVRSMLLEGNGNAVVKPQVSGDKIIGLTPISPYKVTFNVSD-DDLDYSITF-- 166 (413) T ss_pred cccccHHHHHHHhccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCceEEEEEecCceeEEEEcC-CeEEEEEee-- Confidence 56679999999999999999999999999999999999999999988778999999999999988764 555555432 Q ss_pred CCeEEEEcceeeEeeccC--CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHH Q lcl|Aclame:pro 146 TAKQVKCFAHDVIHWKFF--SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEF 223 (406) Q Consensus 146 ~g~~~~~~~~~vih~r~~--~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~ 223 (406) .+ .++++++|||||.+ +.++++|.||+.++..+|..+.++.++..++|+||+.|+++++.++.+++++.++++++| T Consensus 167 ~~--~~~~~~evih~k~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~~~~~~~ 244 (413) T protein:vir:96 167 DN--KEYDPSTLLHFVLNPSIERPFIGTGYKVALKDIVGNLKQASVTKKGFMASEYMPNLIVSVDSDSDELSDEEGRENF 244 (413) T ss_pred cC--cEEchhhEEEEeccCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHHHHHH Confidence 22 36799999999963 346789999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhcc-cccCceeeccCCc-eeeec-cCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHH Q lcl|Aclame:pro 224 EKMREG-SVGGSPLVFDSTM-EYTPL-EIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLP 300 (406) Q Consensus 224 ~~~~~g-~~~~~~~vl~~g~-~~~~l-~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~ 300 (406) ++.++| .++|++++++.|. ++.++ +++++|+||+|.+++++++||++|||||.+||.. ++.+++...|+++||. T Consensus 245 ~~~~~g~~n~g~~~vl~~~~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~---~~~~~~~~~~~~~~l~ 321 (413) T protein:vir:96 245 EEMYLKRKEAGKPWIIPEGMVNVQQIKPLTLNDLAINDAVTLDKKTVAGIFGVPAFLLGVG---TYNKDEFNNFINTKIM 321 (413) T ss_pred HHHhcCccccCceeeecCCcccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCC---cchHHHHHHHHHHHHH Confidence 999988 5788888886664 55666 4689999999999999999999999999999853 2357888999999999 Q ss_pred HHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccC Q lcl|Aclame:pro 301 FYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLN 376 (406) Q Consensus 301 P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n 376 (406) ||+++||++|+++|++.. ++++|++ +.|.+++++++.+++++|++|+||+|+++|+||+ |+||++++++| T Consensus 322 P~~~~ie~~ln~~ll~~~----~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~p~--~~gd~~~~~~n 395 (413) T protein:vir:96 322 SIAQVIQQTYNKLIVEED----MYFSLNPRSLYNYSLTEMVSAGAQMTQLNALRRNEFRNWVGMPPD--AEMDDLLVLEN 395 (413) T ss_pred HHHHHHHHHHHHhhCCCC----cEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCcceeeeccc Confidence 999999999999998753 3556654 5577889999999999999999999999999999 66999999999 Q ss_pred ccchhhccccccccCcccCCCcc Q lcl|Aclame:pro 377 YVFLDKKEEYQDKVGIKGKGGEV 399 (406) Q Consensus 377 ~~~~~~~~~~~~~~~~~~~gg~~ 399 (406) ++|++.....+ ..++||. T Consensus 396 ~~~~~~~~~~~-----~~~~~dt 413 (413) T protein:vir:96 396 YLQQKDLVNQK-----KLIQDET 413 (413) T ss_pred ccchhhccccc-----CCCCCCC Confidence 99998765433 2344444 No 51 >protein:vir:102727 Length: 945 # NCBI annotation: portal protein # Family: family:all:2446 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874016;genbank:gi:118197623;genbank:GeneID:4495919 Probab=100.00 E-value=6.4e-83 Score=471.19 Aligned_cols=402 Identities=13% Similarity=0.100 Sum_probs=316.4 Q ss_pred Cccccc------------ccCCCCcchhhHHHhhc-------------CCcccccchhhhhccHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 1 MSFFQP------------LGTSKVSYDDYISSVLA-------------GDVSQKYLGVSALKNSDILTATSIIAGDIARF 55 (406) Q Consensus 1 M~~f~~------------~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~ 55 (406) .=+|++ ++++..++..-+....+ ......+....++.+++|++||++||++||++ T Consensus 62 ~~~~~~~~~~kk~~i~~pfkkk~~~~~~d~f~~s~es~s~vtsls~pdaf~~vnVs~~~AlknsaV~scI~~IA~sIAsL 141 (945) T protein:vir:10 62 IIIFRKNQVLKKEKIIVPYNHQEPPFKFNLFEYSPESLMYLPSISDPDAFFLINLFRKYRFNNDSKLIKVSEIPKKLTSK 141 (945) T ss_pred eeeehhhhHHHhhcccccccccccchhhhhhhccCccceecccccCccceeeehhhhhhhhccHHHHHHHHHHHhhhccC Confidence 112321 01000111110111100 00123466788999999999999999999999 Q ss_pred eeEEEecCCc---------ccccchHHHHhhhhccccCCHHH----HHHHHHHHHHhcCCceEEEEecCCCceeEEEeec Q lcl|Aclame:pro 56 PLVKKDVNGD---------IIHDEDINYLLNVKSTSNASART----WKFAMAVNAILTGNSFSRILRDPKTNQALQFQFY 122 (406) Q Consensus 56 ~~~~~~~~~~---------~~~~~~~~~lL~~~Pn~~~~~~~----f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l 122 (406) |+++|+...+ ....|++..+|+ +||++||+++ |++.++.+++++||+|++++|+ .+|+|++++|+ T Consensus 142 PlklYrr~edG~~~~~~kk~~~~hpL~~LL~-rPNp~mT~~eFwqsFl~~Lv~dLLL~GNAYieIiRd-~~G~ii~L~pL 219 (945) T protein:vir:10 142 ELEIYKHIEDKHVNYYLKRIRDARNILEFLE-RPDPYFSEVNSWEYLLGMVLDDILTIDRGAIVKIRD-EQGNLVAITPV 219 (945) T ss_pred ceEEEEecccCcccccccccccchHHHHHHh-CCCcccChhHHHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEE Confidence 9999975322 235678888886 9999999988 5567889999999999999997 56899999999 Q ss_pred CCeeEEEEEccCcceEEEEEeecCCe-EEEEcceeeE-eeccCCCCCc---cccCHHHHHHHHHHHHHHHHHHHHHHHh- Q lcl|Aclame:pro 123 RPSETTVEETDNHEIVYTFTDMLTAK-QVKCFAHDVI-HWKFFSHDTI---LGRSPLLSLGDEIDLQTGGINTLIKFFK- 196 (406) Q Consensus 123 ~p~~~~~~~~~~g~~~~~~~~~~~g~-~~~~~~~~vi-h~r~~~~~~~---~G~s~~~~~~~~i~~~~~~~~~~~~~~~- 196 (406) +|+.|++..+.+|...+.+....+|. ...++++++| |+|.++.++. +|+||+.+++.++..+.++.+++.++|. T Consensus 220 dPs~Vti~~ddDG~~~y~Yv~~idG~~~~~v~a~DvIlhirn~s~DG~~~GyGlSPIeaa~~aI~~alAaek~aar~Fsk 299 (945) T protein:vir:10 220 DGTTIKPILSEDTGIVVGYVQEVDGAIVAHFDKRDVVLFRQNLTPDVYMYGYSLPPIEILYKVILSDIFIDKGNLDYYRK 299 (945) T ss_pred CCcceEEEEcCCCcEEEEEEEecCCceEEEecCCceEEEeccCCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 99999999999888877666555554 4568888865 5666666653 5999999999999999999999999995 Q ss_pred cCCCcceEEeec----------CCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHH Q lcl|Aclame:pro 197 DGFSSGILTMKG----------AQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQ 266 (406) Q Consensus 197 ng~~~~~~~~~~----------~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~ 266 (406) ||++|++++..+ +.+++++++++++.|++.++|.++++++++++|++|++++.++.|+||++++++++++ T Consensus 300 NGa~PsGILsvkg~~~~d~k~~~~LseEq~erlKe~wee~~sG~NnG~piVLdeGmef~pLs~s~~DaQfLEsrkfs~ee 379 (945) T protein:vir:10 300 GGSIPEGILAIEPPSYKEGDIYPQLSREQLESIQRQLQAIMMGDYTQVPILSGGKFTWIDFKGKRRDMQFKELAEFVARK 379 (945) T ss_pred CCCccceEEEecCccccccccccccCHHHHHHHHHHHHHHhCCcccccceecCCCceEEEccCChhHHHHHHHHHHHHHH Confidence 789999999753 5679999999999999999998888899999999999999999999999999999999 Q ss_pred HHHHhcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcc--cchhHHHHHHHHH Q lcl|Aclame:pro 267 IAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT--RSVTGRNVDEIVK 342 (406) Q Consensus 267 Ia~~fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 342 (406) ||++|||||++||. ..+++|++++...|++++|+|++++||++||++|+...++..++++|+. ..+.+++++.+.+ T Consensus 380 IArAFGVPP~lLG~~e~st~SNiEqq~~~Fv~~tL~Pil~~IEqeLNrkLl~~~eg~~i~fdFd~ldl~D~ksraEal~k 459 (945) T protein:vir:10 380 ICAVYQVSPQDVGILEGSNKATAEVMASLTKAKGLEPLMATISKGFDEVVSEFRNEKDIKLWFKEDDLEKERDWWNIIQG 459 (945) T ss_pred HHHHhCCCHHHcccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeEEEecchhccCHHHHHHHHHH Confidence 99999999999986 3468999999999999999999999999999999876666666667654 3466789999999 Q ss_pred HHhCCCcCHHHHHHHhCCCCCCCCCCCeeeecc-Cccchhhcccccc-----------ccCcccCCCccCCCCCCC Q lcl|Aclame:pro 343 LVNNQILTPNQGLVELGKQKSTDPNMDRYQSSL-NYVFLDKKEEYQD-----------KVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 343 ~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~-n~~~~~~~~~~~~-----------~~~~~~~gg~~~~~~~~~ 406 (406) ++++|++|+||+|+++|+||+ ||||+++++. |++|.+.....+. ..+...+||+.+++++.+ T Consensus 460 li~sGiLTiNEvRe~lGLpPI--eGGD~lli~~nn~~P~d~~~ka~~ga~p~q~aq~~~dqp~~kGGe~dEns~~p 533 (945) T protein:vir:10 460 QLNTGFRSINEARMEKGLEPV--PWGDVPFSGLRNWKPEDEQAKAQQGAMPPQLAQAMADQPSQQGGGVDENSSVP 533 (945) T ss_pred HHhCCCcCHHHHHHHhCCCCC--CCcceeeeccccccccccccccccCCCCcccccCCCCCCCCCCCCCCCCCCCC Confidence 999999999999999999999 6799999987 5667664432110 111123444444443332 No 52 >protein:vir:8317 Length: 409 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:154 # MgeName: Corndog # Cross-refs: genbank:acc:NP_817885;genbank:gi:29566318;genbank:GeneID:1259513 Probab=100.00 E-value=5.9e-83 Score=471.41 Aligned_cols=362 Identities=14% Similarity=0.111 Sum_probs=301.5 Q ss_pred CcccccccCC---------------------------CCc-ch----hhH--HHh------hcCCcccccchhhhhccHH Q lcl|Aclame:pro 1 MSFFQPLGTS---------------------------KVS-YD----DYI--SSV------LAGDVSQKYLGVSALKNSD 40 (406) Q Consensus 1 M~~f~~~~~~---------------------------~~~-~~----~~~--~~~------~~~~~~~~~~~~~a~~~~~ 40 (406) ||||+..+.- +.. .. .+. ..+ .....+..++...++++++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~t~~~~~~~~~ 80 (409) T protein:vir:83 1 MGFWSNLFGIPSIPDLPNDNGPVDYNPGDPDMVEFRGPEEEPEARALPWIRPTAWSGYPESWATPSWGSAQDKLRTLIDV 80 (409) T ss_pred CchhhhhcccccCCCcccccccccccCCCCceeeccCCCcchhhhhcccccccccccccccccccCccccchhhHhhhHH Confidence 9998654331 110 00 000 011 1122345678888999999 Q ss_pred HHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEe Q lcl|Aclame:pro 41 ILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQ 120 (406) Q Consensus 41 v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~ 120 (406) ||+||++||++||++|+++++.+.. .+.+.++|+.+||++||+++||+.++.++++ ||+|++++.....|+|++|+ T Consensus 81 v~acV~~Ia~~iA~lpl~~~~~~~~---~~~~~~ll~~~PN~~~t~~~f~~~l~~~lll-Gnay~~~i~r~~~G~~~~L~ 156 (409) T protein:vir:83 81 AWACIDLNASVLSSMPIYRMRNGRI---IDSVAWMSNPDPEVYTSWQEFAKQLFWDFQL-GEAFVLPMAHGSDGYPIRFR 156 (409) T ss_pred HHHHHHHHHHhhccCceEEeeCCcc---ccchhhhcccCCCCCCCHHHHHHHHHHHHhh-CCcEEEEEEECCCCcEEEEE Confidence 9999999999999999999976543 3456778999999999999999999999987 99999876444679999999 Q ss_pred ecCCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 121 FYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGF 199 (406) Q Consensus 121 ~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~ 199 (406) ||+|+.+++..+.+|.+.|.+.. ...+++|||+|.+ +.++++|+||+++++.+|..+.++.++..++|+||+ T Consensus 157 pl~p~~v~v~~~~~g~~~y~~~~-------~~~~~eiiHir~~~~~~~~~G~spi~~~~~~i~~~~a~~~~~~~~f~nga 229 (409) T protein:vir:83 157 VVPPWLVNVELKKGARREYRIGG-------LNVTDEILHIRYQGNTADAHGHGPLESAAPRQVVIGLLQKYVQNLAETGG 229 (409) T ss_pred EECCcceEEEEcCCceEEEEEcc-------ccCccceEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCC Confidence 99999999999888877666532 2346899999976 557799999999999999999999999999999999 Q ss_pred CcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCcee-eeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHh Q lcl|Aclame:pro 200 SSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEY-TPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKL 278 (406) Q Consensus 200 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~-~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~l 278 (406) +|+++++.++.+++|++++++++|++.++| |+|+++++.+|+++ ++++++++|+||+|++++++++||++|||||++| T Consensus 230 ~p~gil~~~~~ls~e~~~~~~~~~~~~~~~-nag~~~il~~g~~~~~~~~~s~~d~q~le~r~~~~~eIa~~fgVPp~ll 308 (409) T protein:vir:83 230 VPLYWLGVERRLSETEAVDLMDRWIESRSK-YAGHPALVTGGATLNQAKSMSAQDLSLMELTQFNEARIAILLGVPPFLV 308 (409) T ss_pred CcceEeecCCCCCHHHHHHHHHHHHHhhCC-ccCccceecCCcccccccCCCHHHHHHHHHHHhhHHHHHHHhCCCHHHc Confidence 999999999999999999999999999876 77888999999987 5699999999999999999999999999999999 Q ss_pred ccc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHH Q lcl|Aclame:pro 279 GVN-----SPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQ 353 (406) Q Consensus 279 g~~-----~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE 353 (406) |.. .+++|+|++.+.|++.||.||+++||++|+++|++..+...+.++..++.|++++++.++.++++|++|+|| T Consensus 309 g~~~~~~~~tysn~eq~~~~f~~~tL~P~~~~ie~~l~~~Ll~~~~~~~f~~~~llr~d~~~r~~~~~~~~~~G~lT~NE 388 (409) T protein:vir:83 309 GLPGATGSLTYSNIEQLFSFHDRSSLRPKATAVMAALDRWALPSPQHLELNRDDYTRPSLVERATAYKIMIEAGVMEPNE 388 (409) T ss_pred cCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEeehhhhhccCHHHHHHHHHHHHhCCCcCHHH Confidence 852 357999999999999999999999999999999987553223333335678889999999999999999999 Q ss_pred HHHHhCCCCCCCCCCCeeeeccCcc Q lcl|Aclame:pro 354 GLVELGKQKSTDPNMDRYQSSLNYV 378 (406) Q Consensus 354 ~R~~~g~~p~~~~~gd~~~~~~n~~ 378 (406) +|+++||||+ ++||++- .+-| T Consensus 389 ~R~~~glpp~--~ggd~l~--~~gv 409 (409) T protein:vir:83 389 ARAMERLHSE--AAAVRLS--GGGV 409 (409) T ss_pred HHHHhCCCCC--CCCcccC--CCCC Confidence 9999999998 5687762 2111 No 53 >protein:vir:9359 Length: 348 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:166 # MgeName: phi 12 # Cross-refs: genbank:acc:NP_803337;genbank:gi:29028648;genbank:GeneID:1258089 Probab=100.00 E-value=7.6e-81 Score=459.83 Aligned_cols=340 Identities=19% Similarity=0.223 Sum_probs=301.6 Q ss_pred hccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEE Q lcl|Aclame:pro 52 IARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEE 131 (406) Q Consensus 52 ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~ 131 (406) ||++|+++++.++ ...|++.++|+.+||++||+++||+.++.+++++||+|++++|+ ..|+|++|+|++|+.+++.. T Consensus 1 ia~lp~~~~~~~~--~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~-~~G~~~~L~~l~~~~v~~~~ 77 (348) T protein:vir:93 1 MASLPLKMYEDYK--VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERD-IYHQPSKLFLLNPDVVEMLI 77 (348) T ss_pred CcccceEeEecCc--CcccHHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEC-CCCcEEEEEEEcCCceEEEE Confidence 9999999997553 45799999999999999999999999999999999999999998 55899999999999999988 Q ss_pred ccCcceEEEEEeecCCeEEEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCC Q lcl|Aclame:pro 132 TDNHEIVYTFTDMLTAKQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQ 210 (406) Q Consensus 132 ~~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~ 210 (406) +.++...++.....+|..+.|++++|||||++ +.++++|+||+.++..++..+.++.++. +..++..+++++..+.. T Consensus 78 ~~~~~~~~y~~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~ 155 (348) T protein:vir:93 78 ENQSRELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSN 155 (348) T ss_pred eCCCcEEEEEEEcCCCeEEEEccccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHH--HHhcCCCceeEEecCCC Confidence 88776655555677788889999999999975 6688999999999999999999998886 44455566788888999 Q ss_pred CCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHH Q lcl|Aclame:pro 211 LSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVA 288 (406) Q Consensus 211 ~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~ 288 (406) +++|+.++++++|++.+. ++++++++++|++|+++++++.|+||+|++++++++||++|||||.+||. .++++|++ T Consensus 156 l~~e~~~~~~~~~~~~~~--n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~e 233 (348) T protein:vir:93 156 VSTEKRQQVLEDFKQYYE--ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSNTNFAKNE 233 (348) T ss_pred CCHHHHHHHHHHHHHHhh--cCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHH Confidence 999999999999999885 56789999999999999999999999999999999999999999999986 45689999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCccchh-hhhhhhccc----chhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC Q lcl|Aclame:pro 289 QLMEDYVTNDLPFYFDAITSELGLKTLNDKDRR-LYHIEFDTR----SVTGRNVDEIVKLVNNQILTPNQGLVELGKQKS 363 (406) Q Consensus 289 ~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~ 363 (406) ++.+.|+++||.|++++||++|+++|++..++. .++++|+.. .|.+++++.+.+++++|++|+||+|+++|+||+ T Consensus 234 ~~~~~~~~~~l~P~~~~ie~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~a~~~~~~~~~G~~T~NE~R~~~g~~p~ 313 (348) T protein:vir:93 234 ELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPV 313 (348) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCC Confidence 999999999999999999999999999987653 456777654 467889999999999999999999999999999 Q ss_pred CCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCC Q lcl|Aclame:pro 364 TDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEED 404 (406) Q Consensus 364 ~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~ 404 (406) ||||++++++|++|++..... ....+|||+|++++ T Consensus 314 --~ggD~~~~~~n~~~~~~~~~~----~~~~~gg~~n~~~~ 348 (348) T protein:vir:93 314 --EGGDKPLISGDLYPIDTPLEL----RKSLKGGDKNVNES 348 (348) T ss_pred --CCcCeEeecccccccccchhh----cccccCCCCCcCCC Confidence 669999999999999875432 34567888888887 No 54 >protein:vir:95965 Length: 385 # NCBI annotation: ORF011 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1594 # MgeName: 2638A # Cross-refs: genbank:acc:YP_239800;genbank:gi:66395461;genbank:GeneID:5132882 Probab=100.00 E-value=3.6e-81 Score=461.63 Aligned_cols=370 Identities=15% Similarity=0.115 Sum_probs=302.8 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKS 80 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~P 80 (406) ||||+++.++........ .......++...++++++|++||++||++||++|+++++.+++ ..|+++++|+.+| T Consensus 1 Mg~f~~~f~~~~~~~~~~----~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~--~~~~l~~lL~~~P 74 (385) T protein:vir:95 1 MGLFDSVFKRHSELSWMY----DLEFLQDKSKKAYLKQIALNTVVEMVARTISQSEFRVMKNNTK--EKGTLYYLLNVRP 74 (385) T ss_pred CchhhhhhccCccccccc----chhhhhccchhhhhhhHHHHHHHHHHHHHHcccceeeeecCcc--ccchHHHHHhccc Confidence 999998765443332211 1223345677789999999999999999999999999986644 4689999999999 Q ss_pred cccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeEee Q lcl|Aclame:pro 81 TSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHW 160 (406) Q Consensus 81 n~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~ 160 (406) |++||+++||+.++.+++++||||+++.++ ++.+...+++.+..+..... .++.......+....+++++|||+ T Consensus 75 N~~~t~~~f~~~~~~~l~l~Gna~i~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~eiih~ 148 (385) T protein:vir:95 75 NRNQNAVDFWQKFIFKLIMDNEVLVVKNDE--GHFFVADDFEKEDELGLYSH----RFTNVLVNDFEFKRVFTMDDVIYL 148 (385) T ss_pred CcCCCHHHHHHHHHHHHhhcCceEEEEecC--CCeeeccccccccccccccc----cceeeeecccceeeeeccccEEEe Confidence 999999999999999999999999887664 45666666666665554322 223333334455678999999999 Q ss_pred ccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec--CCCCHHHHHHHHHHHHHHhccc--ccCce Q lcl|Aclame:pro 161 KFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG--AQLSGDARQRARQEFEKMREGS--VGGSP 235 (406) Q Consensus 161 r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~--~~~~~e~~~~~~~~~~~~~~g~--~~~~~ 235 (406) |+++.++ .+|.||+..+..++..+.++.. .+++ |++++..+ ..+++++.+++++.|++.++|. +.+++ T Consensus 149 ~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~------~~~~-~~g~l~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~i 221 (385) T protein:vir:95 149 KYNNQKLDAFSLGLFEDYGEIFGRMIDLQM------LNNQ-IRGILKVDATKFYNKEKQKELQAYIDTLFDAFQNNTIAV 221 (385) T ss_pred cCCCCCcccccchHHHHHHHHHHHHHHHHH------hcCC-CceEEEeCCccCCCHHHHHHHHHHHHHHhhhhhhcCCce Confidence 9887665 7899999999999887665432 2333 45556553 4678999999999999999873 34558 Q ss_pred eeccCCceeeeccC------ChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 236 LVFDSTMEYTPLEI------DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSE 309 (406) Q Consensus 236 ~vl~~g~~~~~l~~------~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~ 309 (406) +++++|++|+++++ ++.|+||+|.+++++++||++|||||++|+ ++++|.+++.+.|+++||.|++++||++ T Consensus 222 ~~l~~g~~~~~l~~~~~~~~s~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~--~~~sn~e~~~~~~~~~~l~P~~~~ie~~ 299 (385) T protein:vir:95 222 VPLTEGLAYEEHSNRGAAQSAQQFSELNELKKTVLTDVARMIGVPPSLVL--GEMADLEKTIESYLQFCINPLLRKIEAE 299 (385) T ss_pred EEcCCCceeEeecccccccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhc--CCCcCHHHHHHHHHHHHHHHHHHHHHHH Confidence 88999999999974 667999999999999999999999999995 6789999999999999999999999999 Q ss_pred HHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccc Q lcl|Aclame:pro 310 LGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEE 385 (406) Q Consensus 310 l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~ 385 (406) ||++|++..++...+++|++ +.|.+++++++.+++++|++|+||+|+++|+||+++|+||++++|+|++|++ T Consensus 300 l~~~L~~~~~~~~~~~~fd~~~l~~~D~~~~~~~~~~~~~~g~lt~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~---- 375 (385) T protein:vir:95 300 LNSKFFYQDEYLNDDMHIKVVGIDKRDPLKLSEAIDKLVASGTFTRNQVRIMTGEEPADDPELDKFIITKNLQSAD---- 375 (385) T ss_pred HHhhcCChhhcccceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeecccceecc---- Confidence 99999998877666777765 4567889999999999999999999999999999999999999999999885 Q ss_pred cccccCcccCCCccCCC Q lcl|Aclame:pro 386 YQDKVGIKGKGGEVNAE 402 (406) Q Consensus 386 ~~~~~~~~~~gg~~~~~ 402 (406) ..||||+|++ T Consensus 376 -------~~kgge~~~e 385 (385) T protein:vir:95 376 -------AFKGGESNEE 385 (385) T ss_pred -------cccCCCCCCC Confidence 3578888777 No 55 >protein:vir:100187 Length: 385 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025029;genbank:gi:48697262;genbank:GeneID:2948285 Probab=100.00 E-value=2.6e-80 Score=456.89 Aligned_cols=368 Identities=21% Similarity=0.295 Sum_probs=307.6 Q ss_pred CcccccccCC-------CCcch-hhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchH Q lcl|Aclame:pro 1 MSFFQPLGTS-------KVSYD-DYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDI 72 (406) Q Consensus 1 M~~f~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~ 72 (406) ||||+++... ..+.. .++....++.....+++..|+++++|++||++||++||++|+++++ |.. T Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~~p~~v~~--------~~~ 72 (385) T protein:vir:10 1 MGLLTPRNFNKRKAKNMVYPSNPAFFTTTVGGMQLSYVSALSALQNTNVYSVINRIASDVASAHFKTEN--------TAT 72 (385) T ss_pred CccccchhcccccccccccccchhhhhhhccccCccccCHHHhhccHHHHHHHHHHHHHHhhCceeeec--------cch Confidence 9999764221 11222 2333444445567889999999999999999999999999999974 345 Q ss_pred HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEE Q lcl|Aclame:pro 73 NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKC 152 (406) Q Consensus 73 ~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~ 152 (406) ..+|+ +||++||+++||+.++.+++++||+|++++++ +.+++|+++..+++..+.. .++|.+.....+..++| T Consensus 73 ~~ll~-~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~r~-----~~~~~p~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~ 145 (385) T protein:vir:10 73 LNRLE-SPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ-----NLEHIPNSDVQINYLPGNM-GIVYTVLESNDRPQMVL 145 (385) T ss_pred hhhhh-cCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC-----ceeEeecCCceEEEEEcCC-ceEEEEEEcCCceEEEE Confidence 56665 99999999999999999999999999999875 4678999999998876554 45677777777888999 Q ss_pred cceeeEeeccCC---CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCC-CHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 153 FAHDVIHWKFFS---HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQL-SGDARQRARQEFEKMRE 228 (406) Q Consensus 153 ~~~~vih~r~~~---~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~ 228 (406) ++++|||||+++ .++++|+||+.+++.+|..+.++.++..++|+||+.|+++++.++.. ++++.+++++.|++.++ T Consensus 146 ~~~eiihik~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~gil~~~~~~~~~e~~~~~~~~~~~~~~ 225 (385) T protein:vir:10 146 RQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKDLESAREEFEKANT 225 (385) T ss_pred ccccEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHHHHHHHHHhC Confidence 999999999754 45679999999999999999999999999999999999999998766 57899999999999999 Q ss_pred ccccCceeeccCCceeeeccCChhHHHHH-HHHHHHHHHHHHHhcCCHHHhccc----ccchhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 229 GSVGGSPLVFDSTMEYTPLEIDTNVLQLI-TSNNFSTAQIAKALRVPSYKLGVN----SPNQSVAQLMEDYVTNDLPFYF 303 (406) Q Consensus 229 g~~~~~~~vl~~g~~~~~l~~~~~d~~~~-e~~~~~~~~Ia~~fgvpp~~lg~~----~~~~n~~~~~~~~~~~~i~P~~ 303 (406) |.++|+++++++|++|++++.++.|+|++ |.+++++++||++|||||++||.. .+++|.|++ ..++..||.|++ T Consensus 226 ~~n~~~~~vl~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~sn~eq~-~~~~~~~l~P~~ 304 (385) T protein:vir:10 226 GDNSGRLMVLPDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHSNIDQI-KATYLANLNSYV 304 (385) T ss_pred ccccCCccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCcccccHHHH-HHHHHHHHHHHH Confidence 98999999999999999999999999975 999999999999999999999853 356787765 445567999999 Q ss_pred HHHHHHHHhhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhc Q lcl|Aclame:pro 304 DAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKK 383 (406) Q Consensus 304 ~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~ 383 (406) +.||++|+++|++.. ..+.+...++.|.+++++.+.+++++|++|+||+|+++|++|++++++|.+.++.+. T Consensus 305 ~~ie~~l~~~l~~~~--~~f~~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~p~~~~~~~~~~~~~------ 376 (385) T protein:vir:10 305 NPIVDELRLKMNAPD--LELDIKDMLDVDDSALINQVSNLAKSGVLGAEQAQFILTRSGFLPDNLPEFKPLTTQ------ 376 (385) T ss_pred HHHHHHHHHhhCCce--EEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCccCCCCCccccCcccc------ Confidence 999999999998642 112222234678899999999999999999999999999999998888888766653 Q ss_pred cccccccCcccCCCccCCC Q lcl|Aclame:pro 384 EEYQDKVGIKGKGGEVNAE 402 (406) Q Consensus 384 ~~~~~~~~~~~~gg~~~~~ 402 (406) .+|||++++ T Consensus 377 ----------~~~g~~~dn 385 (385) T protein:vir:10 377 ----------VKGGDEGDN 385 (385) T ss_pred ----------cCCCCCCCC Confidence 356666666 No 56 >protein:vir:4854 Length: 386 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049394;genbank:gi:9632422;genbank:GeneID:1258515 Probab=100.00 E-value=2.6e-80 Score=456.86 Aligned_cols=373 Identities=24% Similarity=0.332 Sum_probs=311.1 Q ss_pred CcccccccCCCCcch----hhHH----Hhhc-CCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccch Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYD----DYIS----SVLA-GDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDED 71 (406) Q Consensus 1 M~~f~~~~~~~~~~~----~~~~----~~~~-~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 71 (406) ||||++.+..+.+.. .++. .+.+ ...+..++..+++++|+|++||++||++||+||+++++. T Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~i~~ia~~ia~~p~~~~~~--------- 71 (386) T protein:vir:48 1 MPIFNITNLATESPPISQGGFFDITDPDFLSTLNGSEWVSAESALRNSDLFSIINQLSNDLATVKLTASRK--------- 71 (386) T ss_pred CcccccccccccccccccccccccccchhcccccCCceechhhhhcchHHHHHHHHHHHhhccCceeeccc--------- Confidence 999988654432221 1111 1111 123456888999999999999999999999999999853 Q ss_pred HHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcce-EEEEEee--cCCe Q lcl|Aclame:pro 72 INYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI-VYTFTDM--LTAK 148 (406) Q Consensus 72 ~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~-~~~~~~~--~~g~ 148 (406) ....|+.+||++||+++||+.++.+++++||+|++++++ ..|++.+|+|++|+.|++..+.+|.. +|.+... ..+. T Consensus 72 ~~~~l~~~pN~~~t~~~f~~~~~~~lll~Gna~~~i~r~-~~g~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~~~~~~ 150 (386) T protein:vir:48 72 QLQGIIDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRN-ENGRDMKWEYLRPSQVSFNRLDNKDGIYYNITFDDPRIPP 150 (386) T ss_pred hhHHHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEEC-CCCcEEEEEEecCceeEEEEcCCCceEEEEEEecCccccc Confidence 244567899999999999999999999999999999998 56899999999999999988877754 4444332 3456 Q ss_pred EEEEcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHh Q lcl|Aclame:pro 149 QVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMR 227 (406) Q Consensus 149 ~~~~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 227 (406) .+.+++++|||+|+++.++ ++|+||+..+..++..+.++.++..++|+||+.|+++++.++.+++++.+++++.|.... T Consensus 151 ~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ii~~~~~~~~e~~~~~~~~~~~~~ 230 (386) T protein:vir:48 151 KQHVPQGDVLHFKLLSVDGGLTSVSPLMALSRELNIQKASDKLTLNSLKNALNANGILKIKGGGLLDFKTKLSRSRQAMK 230 (386) T ss_pred eeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHhh Confidence 6789999999999887665 899999999999999999999999999999999999999999999999999999988755 Q ss_pred cccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 228 EGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAIT 307 (406) Q Consensus 228 ~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie 307 (406) .++|+++++++|++|++++.+++|+||+|++++++++||++|||||.+||..+++++++++.+.|++.+|.|+++.|| T Consensus 231 --~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~e~~~~~~~~~~l~P~~~~ie 308 (386) T protein:vir:48 231 --QMQGGPLVLDDLEEFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPENVVGGQGDQQSSLEMSLDLYNKAVSRYLRPFL 308 (386) T ss_pred --cCCCCceecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccHHHHHHHHHHHHHHHHHHHHH Confidence 467889999999999999999999999999999999999999999999999889999999999999999999999999 Q ss_pred HHHHhhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccc Q lcl|Aclame:pro 308 SELGLKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQ 387 (406) Q Consensus 308 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~ 387 (406) ++|+++|++..+. .+...++.+.......+.+++++|++|+||+|+++|++|++. ++.... + T Consensus 309 ~~l~~~l~~~~~~---~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~lg~~~~~~--~~~~~~-------------~ 370 (386) T protein:vir:48 309 SELSQKLSCDVDA---DILPAVDPTGSNSVSRINSMVKSGTLAQNQGLYILQQAEILP--KELPEG-------------E 370 (386) T ss_pred HHHHHhhcchhhc---chhhhhccChHHHHHHHHHHHhCCCcCHHHHHHHhhcCCCCC--ccchhh-------------c Confidence 9999999875432 222234456667778888999999999999999999999853 442211 1 Q ss_pred cccCcccCCCccCCCC Q lcl|Aclame:pro 388 DKVGIKGKGGEVNAEE 403 (406) Q Consensus 388 ~~~~~~~~gg~~~~~~ 403 (406) .....+.+|||+|++| T Consensus 371 ~~~~~~~~gGd~~~~~ 386 (386) T protein:vir:48 371 NPNKTTLKGGEINGED 386 (386) T ss_pred CCCCCccCCCCCCCCC Confidence 2223456788888877 No 57 >protein:vir:9507 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:170 # MgeName: phiN315 # Cross-refs: genbank:acc:NP_835554;genbank:gi:30043953;genbank:GeneID:1260535 Probab=100.00 E-value=1.6e-80 Score=458.06 Aligned_cols=381 Identities=15% Similarity=0.123 Sum_probs=306.4 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKS 80 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~P 80 (406) ||||+++.++......+ ........++...++++++|++||++||++||++|+++++.+ ....|+++++|+.+| T Consensus 1 Mg~f~~lf~~~~~~~~~----~~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~--~~~~~~~~~ll~~~P 74 (395) T protein:vir:95 1 MSILEKIFKTRKDITYM----LDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGN--RIQKNDVYYKLNIKP 74 (395) T ss_pred CchhhhhhccCcccccc----ccchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCC--ccccchHHHHHHhcc Confidence 99998765544332221 122344567778899999999999999999999999999754 456789999999999 Q ss_pred cccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeEee Q lcl|Aclame:pro 81 TSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHW 160 (406) Q Consensus 81 n~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~ 160 (406) |++||+++||+.++.++++.|++|+++.++ . .++++++..+++....+. .++.+.....+....+++++|||+ T Consensus 75 N~~~t~~~f~~~~~~~lll~g~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~evih~ 147 (395) T protein:vir:95 75 NTDLSSDSFWQQVIYKLIYDNEVLIVVSDS-K-----ELLIADSFYREEYALYDD-IFKDVTVKDYTYQRTFTMQEVIYL 147 (395) T ss_pred CcCCCHHHHHHHHHHHHhhCCceEEEEecC-C-----CeEecCCccceeEeecCc-ceeEEEEcCceeeeeeccccEEEE Confidence 999999999999999999999988776543 2 245565555554433332 333444455566778999999999 Q ss_pred ccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecC-CCCHHHHHHHHHHHHHHhcccccCc--ee Q lcl|Aclame:pro 161 KFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGA-QLSGDARQRARQEFEKMREGSVGGS--PL 236 (406) Q Consensus 161 r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g~~~~~--~~ 236 (406) |+++ ....+|.||+..+..+++.+.+ .|.+++.+++++..+. ..++++.+++++.|++.+++.++++ ++ T Consensus 148 ~~~~~~~~~~G~spi~~~~~~~~~~~~-------~~~~~~~~~gii~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~v~ 220 (395) T protein:vir:95 148 KYNNNKVTHFVESLFEDYGKIFGRMIG-------AQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIA 220 (395) T ss_pred ccCCCCcccccchHHHHHHHHHHHHHH-------HHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHHhccccccCcceE Confidence 9765 4557899999999888876553 3556666667666554 5789999999999999998866655 44 Q ss_pred eccCCceeeeccCChhHH-----HHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 237 VFDSTMEYTPLEIDTNVL-----QLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSELG 311 (406) Q Consensus 237 vl~~g~~~~~l~~~~~d~-----~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~ 311 (406) ++++|++|++++.++.++ ||+|++++++++||++|||||++|| ++++|.+++.+.|++++|.|++.+||++|+ T Consensus 221 ~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~--~~~sn~e~~~~~~~~~~l~P~~~~ie~~l~ 298 (395) T protein:vir:95 221 PLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY--GETADLEKNTLVFEKFCLTPLLKKIQNELN 298 (395) T ss_pred EcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc--CcccCHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 579999999999887765 9999999999999999999999996 578899999999999999999999999999 Q ss_pred hhccCccchhhhhhhhc----ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccc Q lcl|Aclame:pro 312 LKTLNDKDRRLYHIEFD----TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQ 387 (406) Q Consensus 312 ~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~ 387 (406) ++|+++.++.. .++|+ .+.|.+++++++.+++++|++|+||+|+++|+||+++++||++++|+|++|++.....+ T Consensus 299 ~kL~~~~~~~~-~~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g~~d~~~~~~n~~~~~~~~~~~ 377 (395) T protein:vir:95 299 AKLITQSMYLK-DTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLITKNYEKANSGENDE 377 (395) T ss_pred HhhcChhhhcc-cceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeecccccccccccccc Confidence 99998766432 23444 45678899999999999999999999999999999999999999999999998766544 Q ss_pred c-ccCcccCCCccCCCCC Q lcl|Aclame:pro 388 D-KVGIKGKGGEVNAEED 404 (406) Q Consensus 388 ~-~~~~~~~gg~~~~~~~ 404 (406) . ......+|||+|+++| T Consensus 378 ~~~~~~~~kgg~~~~~g~ 395 (395) T protein:vir:95 378 KEKDENTLKGGDEDESGD 395 (395) T ss_pred CcccccccCCCCCCCCCC Confidence 3 3334578899998888 No 58 >protein:vir:100650 Length: 395 # NCBI annotation: 77ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1476 # MgeName: 77 # Cross-refs: genbank:acc:NP_958604;genbank:gi:41189523;genbank:GeneID:2743796 Probab=100.00 E-value=1.6e-80 Score=458.06 Aligned_cols=381 Identities=15% Similarity=0.123 Sum_probs=306.4 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKS 80 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~P 80 (406) ||||+++.++......+ ........++...++++++|++||++||++||++|+++++.+ ....|+++++|+.+| T Consensus 1 Mg~f~~lf~~~~~~~~~----~~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~--~~~~~~~~~ll~~~P 74 (395) T protein:vir:10 1 MSILEKIFKTRKDITYM----LDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGN--RIQKNDVYYKLNIKP 74 (395) T ss_pred CchhhhhhccCcccccc----ccchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCC--ccccchHHHHHHhcc Confidence 99998765544332221 122344567778899999999999999999999999999754 456789999999999 Q ss_pred cccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeEee Q lcl|Aclame:pro 81 TSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHW 160 (406) Q Consensus 81 n~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~ 160 (406) |++||+++||+.++.++++.|++|+++.++ . .++++++..+++....+. .++.+.....+....+++++|||+ T Consensus 75 N~~~t~~~f~~~~~~~lll~g~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~evih~ 147 (395) T protein:vir:10 75 NTDLSSDSFWQQVIYKLIYDNEVLIVVSDS-K-----ELLIADSFYREEYALYDD-IFKDVTVKDYTYQRTFTMQEVIYL 147 (395) T ss_pred CcCCCHHHHHHHHHHHHhhCCceEEEEecC-C-----CeEecCCccceeEeecCc-ceeEEEEcCceeeeeeccccEEEE Confidence 999999999999999999999988776543 2 245565555554433332 333444455566778999999999 Q ss_pred ccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecC-CCCHHHHHHHHHHHHHHhcccccCc--ee Q lcl|Aclame:pro 161 KFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGA-QLSGDARQRARQEFEKMREGSVGGS--PL 236 (406) Q Consensus 161 r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g~~~~~--~~ 236 (406) |+++ ....+|.||+..+..+++.+.+ .|.+++.+++++..+. ..++++.+++++.|++.+++.++++ ++ T Consensus 148 ~~~~~~~~~~G~spi~~~~~~~~~~~~-------~~~~~~~~~gii~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~v~ 220 (395) T protein:vir:10 148 KYNNNKVTHFVESLFEDYGKIFGRMIG-------AQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIA 220 (395) T ss_pred ccCCCCcccccchHHHHHHHHHHHHHH-------HHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHHhccccccCcceE Confidence 9765 4557899999999888876553 3556666667666554 5789999999999999998866655 44 Q ss_pred eccCCceeeeccCChhHH-----HHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 237 VFDSTMEYTPLEIDTNVL-----QLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSELG 311 (406) Q Consensus 237 vl~~g~~~~~l~~~~~d~-----~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~ 311 (406) ++++|++|++++.++.++ ||+|++++++++||++|||||++|| ++++|.+++.+.|++++|.|++.+||++|+ T Consensus 221 ~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~--~~~sn~e~~~~~~~~~~l~P~~~~ie~~l~ 298 (395) T protein:vir:10 221 PLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY--GETADLEKNTLVFEKFCLTPLLKKIQNELN 298 (395) T ss_pred EcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc--CcccCHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 579999999999887765 9999999999999999999999996 578899999999999999999999999999 Q ss_pred hhccCccchhhhhhhhc----ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccc Q lcl|Aclame:pro 312 LKTLNDKDRRLYHIEFD----TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQ 387 (406) Q Consensus 312 ~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~ 387 (406) ++|+++.++.. .++|+ .+.|.+++++++.+++++|++|+||+|+++|+||+++++||++++|+|++|++.....+ T Consensus 299 ~kL~~~~~~~~-~~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g~~d~~~~~~n~~~~~~~~~~~ 377 (395) T protein:vir:10 299 AKLITQSMYLK-DTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLITKNYEKANSGENDE 377 (395) T ss_pred HhhcChhhhcc-cceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeecccccccccccccc Confidence 99998766432 23444 45678899999999999999999999999999999999999999999999998766544 Q ss_pred c-ccCcccCCCccCCCCC Q lcl|Aclame:pro 388 D-KVGIKGKGGEVNAEED 404 (406) Q Consensus 388 ~-~~~~~~~gg~~~~~~~ 404 (406) . ......+|||+|+++| T Consensus 378 ~~~~~~~~kgg~~~~~g~ 395 (395) T protein:vir:10 378 KEKDENTLKGGDEDESGD 395 (395) T ss_pred CcccccccCCCCCCCCCC Confidence 3 3334578899998888 No 59 >protein:vir:101289 Length: 395 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1591 # MgeName: phiNM3 # Cross-refs: genbank:acc:YP_908829;genbank:gi:118725093;genbank:GeneID:4555860 Probab=100.00 E-value=1.6e-80 Score=458.06 Aligned_cols=381 Identities=15% Similarity=0.123 Sum_probs=306.4 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKS 80 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~P 80 (406) ||||+++.++......+ ........++...++++++|++||++||++||++|+++++.+ ....|+++++|+.+| T Consensus 1 Mg~f~~lf~~~~~~~~~----~~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~--~~~~~~~~~ll~~~P 74 (395) T protein:vir:10 1 MSILEKIFKTRKDITYM----LDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGN--RIQKNDVYYKLNIKP 74 (395) T ss_pred CchhhhhhccCcccccc----ccchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCC--ccccchHHHHHHhcc Confidence 99998765544332221 122344567778899999999999999999999999999754 456789999999999 Q ss_pred cccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeEee Q lcl|Aclame:pro 81 TSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHW 160 (406) Q Consensus 81 n~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~ 160 (406) |++||+++||+.++.++++.|++|+++.++ . .++++++..+++....+. .++.+.....+....+++++|||+ T Consensus 75 N~~~t~~~f~~~~~~~lll~g~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~evih~ 147 (395) T protein:vir:10 75 NTDLSSDSFWQQVIYKLIYDNEVLIVVSDS-K-----ELLIADSFYREEYALYDD-IFKDVTVKDYTYQRTFTMQEVIYL 147 (395) T ss_pred CcCCCHHHHHHHHHHHHhhCCceEEEEecC-C-----CeEecCCccceeEeecCc-ceeEEEEcCceeeeeeccccEEEE Confidence 999999999999999999999988776543 2 245565555554433332 333444455566778999999999 Q ss_pred ccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecC-CCCHHHHHHHHHHHHHHhcccccCc--ee Q lcl|Aclame:pro 161 KFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGA-QLSGDARQRARQEFEKMREGSVGGS--PL 236 (406) Q Consensus 161 r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g~~~~~--~~ 236 (406) |+++ ....+|.||+..+..+++.+.+ .|.+++.+++++..+. ..++++.+++++.|++.+++.++++ ++ T Consensus 148 ~~~~~~~~~~G~spi~~~~~~~~~~~~-------~~~~~~~~~gii~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~v~ 220 (395) T protein:vir:10 148 KYNNNKVTHFVESLFEDYGKIFGRMIG-------AQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIA 220 (395) T ss_pred ccCCCCcccccchHHHHHHHHHHHHHH-------HHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHHhccccccCcceE Confidence 9765 4557899999999888876553 3556666667666554 5789999999999999998866655 44 Q ss_pred eccCCceeeeccCChhHH-----HHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 237 VFDSTMEYTPLEIDTNVL-----QLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSELG 311 (406) Q Consensus 237 vl~~g~~~~~l~~~~~d~-----~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~ 311 (406) ++++|++|++++.++.++ ||+|++++++++||++|||||++|| ++++|.+++.+.|++++|.|++.+||++|+ T Consensus 221 ~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~--~~~sn~e~~~~~~~~~~l~P~~~~ie~~l~ 298 (395) T protein:vir:10 221 PLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY--GETADLEKNTLVFEKFCLTPLLKKIQNELN 298 (395) T ss_pred EcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc--CcccCHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 579999999999887765 9999999999999999999999996 578899999999999999999999999999 Q ss_pred hhccCccchhhhhhhhc----ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccc Q lcl|Aclame:pro 312 LKTLNDKDRRLYHIEFD----TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQ 387 (406) Q Consensus 312 ~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~ 387 (406) ++|+++.++.. .++|+ .+.|.+++++++.+++++|++|+||+|+++|+||+++++||++++|+|++|++.....+ T Consensus 299 ~kL~~~~~~~~-~~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g~~d~~~~~~n~~~~~~~~~~~ 377 (395) T protein:vir:10 299 AKLITQSMYLK-DTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLITKNYEKANSGENDE 377 (395) T ss_pred HhhcChhhhcc-cceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeecccccccccccccc Confidence 99998766432 23444 45678899999999999999999999999999999999999999999999998766544 Q ss_pred c-ccCcccCCCccCCCCC Q lcl|Aclame:pro 388 D-KVGIKGKGGEVNAEED 404 (406) Q Consensus 388 ~-~~~~~~~gg~~~~~~~ 404 (406) . ......+|||+|+++| T Consensus 378 ~~~~~~~~kgg~~~~~g~ 395 (395) T protein:vir:10 378 KEKDENTLKGGDEDESGD 395 (395) T ss_pred CcccccccCCCCCCCCCC Confidence 3 3334578899998888 No 60 >protein:vir:4089 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:86 # MgeName: 2389 # Cross-refs: genbank:acc:NP_510984;swissprot:trembl:q8w606;genbank:gi:17488506;uniprot:Q8W606;genbank:GeneID:1260314 Probab=100.00 E-value=2.5e-79 Score=451.52 Aligned_cols=382 Identities=13% Similarity=0.080 Sum_probs=291.7 Q ss_pred CcccccccCCCCc--chhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhh Q lcl|Aclame:pro 1 MSFFQPLGTSKVS--YDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNV 78 (406) Q Consensus 1 M~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~ 78 (406) ||||++++..... .......+........++...++++++|++||++||+++|++||++++.++ ...|++.++|+. T Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~v~~Ia~~ia~~p~~~~~~~~--~~~~~~~~lL~~ 78 (395) T protein:vir:40 1 MGFKSWVSGFFNEEQRTLNLTDTVWCSIPSEKLKELSIKKWAIDSCANKIANTLSCAEVLTYEKGE--EVRKKNWYMFNV 78 (395) T ss_pred CchHHHHHhhhcccccccccccchhhccccccchhhhhhhHHHHHHHHHHHHHHhhCceeeccCCc--cccchHHHHHHh Confidence 9998765322111 111122233333455677788999999999999999999999999998654 356889999999 Q ss_pred hccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeE Q lcl|Aclame:pro 79 KSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVI 158 (406) Q Consensus 79 ~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vi 158 (406) +||++||+++||+.++.+++++||||+++.++. +++..+..... .......+..+.....+..+.+++++|+ T Consensus 79 ~PN~~~t~~~f~~~~~~~lll~Gnay~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~evi 150 (395) T protein:vir:40 79 EANQNQNATEFWKKAIYKLVYDNEALIFMQDEY-------IYVADSFTKND-KSLYENTYTEVTLKDLTLKKEFKESEVL 150 (395) T ss_pred cCCCCCCHHHHHHHHHHHHhhcCceEEEEecCc-------eeecCCccccc-cccccceeeeeeecCceeeeeeccccEE Confidence 999999999999999999999999999987753 23333222111 1111112222222223335679999999 Q ss_pred eeccCCCCCc-cccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc--cccCce Q lcl|Aclame:pro 159 HWKFFSHDTI-LGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG--SVGGSP 235 (406) Q Consensus 159 h~r~~~~~~~-~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g--~~~~~~ 235 (406) |+|+++..+. ++.+.+..+...+.... ....+.++.++.+++.....+++++.+++++.|++.+.| .+++++ T Consensus 151 h~r~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (395) T protein:vir:40 151 HLTLNNESIKSIIDGFYLLYGDLLTAAV-----NKYKKLNSRKIIVKLKAMFGQTPEAEEKLRLMLSERMKKFLAEGDSA 225 (395) T ss_pred EeecCCCCccccchhHHHHHHHHHHHHH-----HHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHHHHhhccCCce Confidence 9997654432 33333343333332222 222345556666666677889999999999999999976 467789 Q ss_pred eeccCCceeeeccCChhHHHHHHHHHHHH---HHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 236 LVFDSTMEYTPLEIDTNVLQLITSNNFST---AQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSELGL 312 (406) Q Consensus 236 ~vl~~g~~~~~l~~~~~d~~~~e~~~~~~---~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~ 312 (406) +++++|++|++++++++|+|++|+++++. ++||++|||||.+|| ++++|++++.+.|++++|.|++++||++|++ T Consensus 226 ~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~Ia~~fgVPp~~l~--~~~sn~e~~~~~f~~~~L~P~~~~ie~~l~~ 303 (395) T protein:vir:40 226 LPVEDGMEIDELAGDSKIAESRDIKKMIDDVFEMVANSFNIPLGLAK--GDTVGLSEQVNSFLMFSINPIAEMFTDEGNR 303 (395) T ss_pred eecCCCceEEeccCChhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhc--CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 99999999999999999999999998875 799999999999996 5688999999999999999999999999999 Q ss_pred hccCccchh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccc Q lcl|Aclame:pro 313 KTLNDKDRR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQ 387 (406) Q Consensus 313 ~l~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~ 387 (406) +||+..++. .++++|++ +.|.+++++.+.+++++|++|+||+|+++|+||+++|+||++++|+|++|++... T Consensus 304 kLl~~~~~~~g~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~--- 380 (395) T protein:vir:40 304 KFYGRDSVLERTYMKLDTTRIKVQDIQEIASSMDVLFHIGVNTIDDNLRMIGREPVMSPETQERFVTKNYAPLGENE--- 380 (395) T ss_pred hcCChhhhcCCceEEEechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCCCCceeeeccccccccccc--- Confidence 999987754 35666664 5578899999999999999999999999999999999999999999999997533 Q ss_pred cccCcccCCCccCCCCCCC Q lcl|Aclame:pro 388 DKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 388 ~~~~~~~~gg~~~~~~~~~ 406 (406) ...||||+|+++..| T Consensus 381 ----~~~kgge~~~~~~~~ 395 (395) T protein:vir:40 381 ----EDLKGGDINENKGDS 395 (395) T ss_pred ----cccCCCCCCCCcCCC Confidence 346888888887777 No 61 >protein:vir:1082 Length: 359 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:21 # MgeName: bIL309 # Cross-refs: genbank:acc:NP_076736;genbank:gi:13095846;genbank:GeneID:920394 Probab=100.00 E-value=1.8e-78 Score=446.79 Aligned_cols=345 Identities=21% Similarity=0.300 Sum_probs=289.7 Q ss_pred CcccccccCCCC-cchhhHHHhhcCC---cccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHh Q lcl|Aclame:pro 1 MSFFQPLGTSKV-SYDDYISSVLAGD---VSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLL 76 (406) Q Consensus 1 M~~f~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL 76 (406) ||||++++++.. +...++..+..++ .+..+++.+||++++||+||++||++||++|+. .+++.++| T Consensus 1 M~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~av~~cv~~ia~~ia~~p~~----------~~~~~~~L 70 (359) T protein:vir:10 1 MSILNPFERRSSITPNNYYPFMVQNGSIVPNSLVDATEALKNSDLYAVTSLISSDIAGTRFI----------GNQVFTSV 70 (359) T ss_pred CcccchhhccccCCCCcchhhhhccccccCCcccCHHHhhcchHHHHHHHHHHHhhhcCccc----------cchHHHHH Confidence 999987665433 2333333333222 345788899999999999999999999999983 45677778 Q ss_pred hhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEccee Q lcl|Aclame:pro 77 NVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHD 156 (406) Q Consensus 77 ~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~ 156 (406) +.+||++||+++||+.++.+++++||+|++++++ ..|+|.+++|++|+.+++..+ ++.++|.+....++..+++++++ T Consensus 71 ~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~~g~~~~l~~l~~~~v~i~~~-~~~~~y~~~~~~~~~~~~~~~~e 148 (359) T protein:vir:10 71 LNNPSHLTNAFSFWQTAILNLLLNGNVFLAILKG-DNSLMKELRLIPSNAITIDLT-DDTLTYEVNQFDDYPSAKYNASE 148 (359) T ss_pred hhcccccCCHHHHHHHHHHhccccCceEEEEEEC-CCCeEEEEEEeCCceEEEEEc-CCeEEEEEEecCCceEEEEcccc Confidence 8899999999999999999999999999999998 568999999999999998765 45677888777788889999999 Q ss_pred eEeeccCC-----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecC-CCCHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 157 VIHWKFFS-----HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGA-QLSGDARQRARQEFEKMREGS 230 (406) Q Consensus 157 vih~r~~~-----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g~ 230 (406) |+|||.++ .++++|+||+.++..++..+.++.++..++|+||++|+++++.++ .+++++.+++++.|++.++|. T Consensus 149 vih~~~~~~~~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e~~~~~~~~~~~~~~~~ 228 (359) T protein:vir:10 149 MIHVKIMAYGVDTLHNLVGHSPLESLTSEIGQQKEANRLSLSTLKGALNPTSVVKVPQGTLSSEAKDSIRKEFEKANGGN 228 (359) T ss_pred eEEeccCCCCCCccCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHHHHHHHHHhCcc Confidence 99999754 367899999999999999999999999999999999999999865 789999999999999999888 Q ss_pred ccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc----cchhHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 231 VGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS----PNQSVAQLMEDYVTNDLPFYFDAI 306 (406) Q Consensus 231 ~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~----~~~n~~~~~~~~~~~~i~P~~~~i 306 (406) |+|+++||++|++|++++.++.|+||+|.+++++++||++|||||++||..+ ++++++++...|+..+|.||++.| T Consensus 229 n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~~~e~~~~~~l~~~l~p~~~~l 308 (359) T protein:vir:10 229 NSGRVMVLDQSADFSTVSINADVANYLNSMNWGRTQIAKAFGVSDSYLNGTGDQQSSLDQIKDLYVNALNRFIEPLISEL 308 (359) T ss_pred ccCCceecCCCcceeeecCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCcccccHHHHHHHHHHHHHHHHHHHHHHH Confidence 9999999999999999999999999999999999999999999999998643 445667777777777777777777 Q ss_pred HHHHHhhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 307 TSELGLKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKST 364 (406) Q Consensus 307 e~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~ 364 (406) +.+|++++..... ..++++ .......+.+++++|++|+||+|+++|++|+= T Consensus 309 ~~~l~~~~~~~~~---~~~~~d----~~~~~~~~~~~~~~G~~t~NE~R~~l~~~pv~ 359 (359) T protein:vir:10 309 RIKCDSSIGVDMS---PITDYS----NSVFKADILNWVKEGIIEPTEAKTLLESKGII 359 (359) T ss_pred HHHhhhhhcccch---hhhhcC----HHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 7777665532221 122332 33345567789999999999999999999994 No 62 >protein:vir:9641 Length: 395 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:173 # MgeName: 315.1 # Cross-refs: genbank:acc:NP_795403;genbank:gi:28876176;genbank:GeneID:1257709 Probab=100.00 E-value=8.1e-79 Score=448.72 Aligned_cols=379 Identities=13% Similarity=0.047 Sum_probs=286.1 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKS 80 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~P 80 (406) ||||++++.+......... .+.....++...++++++||+||++||++||+||+++++.+++....|++.+||+.+| T Consensus 1 Mgl~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~v~~~i~~Ia~~ia~lp~~v~~~~~~~~~~~~~~~lL~~~P 77 (395) T protein:vir:96 1 MGILDFFSFKKSGTLSDDD---SGSTTSEKLTNVVLKEDALYKCVNYLARIISKSTFRIKAPEKLTENQKDWLYWINTKA 77 (395) T ss_pred CcchhhhcCCCCccccccc---cccchhhhcchhhhhhHHHHHHHHHHHHhhccceeEEEeCCccccccchHHHHHhhcC Confidence 9999987665433222211 1112234677789999999999999999999999999999888888999999999999 Q ss_pred cccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeEee Q lcl|Aclame:pro 81 TSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHW 160 (406) Q Consensus 81 n~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~ 160 (406) |++||+++||+.++.+++++||+|+++.++. .+ ++.+..... ..-.+..++.+........+.+++++|+|| T Consensus 78 N~~~t~~~f~~~l~~~lll~Gna~~~~~~~~-~~-----~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~dvih~ 149 (395) T protein:vir:96 78 NPNQSASQFWVEVVQKLLVDGETLIFVIPGK-GI-----YVADAFTQD--KKLSGNKFKVSRVQGQTYEKIFTFDQVIYL 149 (395) T ss_pred CCCCCHHHHHHHHHHHHhhcCceEEEEEcCC-ce-----ecCCccccc--cccccceeeeeeeccceeeeEeccCceEEe Confidence 9999999999999999999999999998863 22 222211111 111122222222223334567999999999 Q ss_pred ccCCCCC-ccccCHHHHHHHHHH------HHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccC Q lcl|Aclame:pro 161 KFFSHDT-ILGRSPLLSLGDEID------LQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGG 233 (406) Q Consensus 161 r~~~~~~-~~G~s~~~~~~~~i~------~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~ 233 (406) |+++.+. .++.+++......+. ....+.++..+++++++.+.+++...+...++..+++.+++.....+ +++ T Consensus 150 k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 228 (395) T protein:vir:96 150 KNDNSDLMLKVESLWEEYGELLGHVINNQKIANQIRFTMTPPKDKVRERAQENSDGGRQPKSDKDFFKRTIEKIRT-ESV 228 (395) T ss_pred cccCCccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhcccccccceeeccCchhhHHHHHHHHHHHHHHhhc-CCc Confidence 9765432 334433333333322 22334467888899999999998877766665555554444444332 345 Q ss_pred ceeeccCCceeeeccCChhHHHHHHHHHHH------HHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 234 SPLVFDSTMEYTPLEIDTNVLQLITSNNFS------TAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAIT 307 (406) Q Consensus 234 ~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~------~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie 307 (406) +++++++|++|++++.++.|+|+++.+++. .++||++|||||++|| ++++|.+++.+.|+++||.||+++|| T Consensus 229 ~v~~l~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~~~eIa~~fgVPp~~l~--~~~sn~e~~~~~f~~~~L~P~~~~ie 306 (395) T protein:vir:96 229 VGIPVTANTNYEEYGSKNTGSVKSYVDDIKKLKDQYMAEFAEMLGIPISLLH--GDIADNQKNYELLLEGPIESLITNIV 306 (395) T ss_pred ceEEccCCceeEecccChhhhhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhc--CCCccHHHHHHHHHHHHHHHHHHHHH Confidence 578899999999999999999999988776 4789999999999996 57889999999999999999999999 Q ss_pred HHHHhhccCccchhh-hhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcc Q lcl|Aclame:pro 308 SELGLKTLNDKDRRL-YHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE 384 (406) Q Consensus 308 ~~l~~~l~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~ 384 (406) ++|+++|+++.++.. +++++ .++.|.+++++.+..++++|++|+||+|+++|+||+++|+||++++|+|++|++. T Consensus 307 ~~l~~~Ll~~~e~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~pi~~~~gD~~~~~~N~~~~~~-- 384 (395) T protein:vir:96 307 DGLEYAIFDKSETLEGSFIKVTGLKNYDLFSISSQADKLISSGFVFIDEVREEIGLPELPDGLGKVLYMTKNYESVLE-- 384 (395) T ss_pred HHHHhhcCChhhhcCceeEeecchhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeecccceechh-- Confidence 999999999776532 33333 3567889999999999999999999999999999999999999999999998862 Q ss_pred ccccccCcccCCCccCCCCCC Q lcl|Aclame:pro 385 EYQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 385 ~~~~~~~~~~~gg~~~~~~~~ 405 (406) +|||+|++.+. T Consensus 385 ----------~gge~~~~~~~ 395 (395) T protein:vir:96 385 ----------RGGEVDEEVET 395 (395) T ss_pred ----------ccCCCCCCCCC Confidence 46664444444 No 63 >protein:vir:100882 Length: 383 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358762;genbank:gi:78000027;genbank:GeneID:3726153 Probab=100.00 E-value=1e-77 Score=442.73 Aligned_cols=366 Identities=20% Similarity=0.281 Sum_probs=301.1 Q ss_pred Cccccccc---CCC----Ccc-hhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchH Q lcl|Aclame:pro 1 MSFFQPLG---TSK----VSY-DDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDI 72 (406) Q Consensus 1 M~~f~~~~---~~~----~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~ 72 (406) ||||+++. ... .+. ..++....++.....++..+++++++|++||++||++||++|+++++ |.. T Consensus 1 Mg~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~v~~~i~~ia~~ia~~~~~~~~--------~~~ 72 (383) T protein:vir:10 1 MGLLTPKNFSKRNAKNMVYPSNPAFFTTTVGGMQLSYVSALSALQNTNVYSVINRIASDVSSAHFKTEN--------TAT 72 (383) T ss_pred CCcccccccccccccccccccchhhhhhhccCccccccchhHhhcchHHHHHHHHHHHhhccCceeecc--------cch Confidence 99997531 111 112 23444455556677889999999999999999999999999999874 345 Q ss_pred HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEE Q lcl|Aclame:pro 73 NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKC 152 (406) Q Consensus 73 ~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~ 152 (406) ..+|+ +||++||+++||+.++.+++++||+|++++++ +.+++|+++..+++..+.. .++|.+....++..++| T Consensus 73 ~~ll~-~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~~~-----~~~~~p~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~ 145 (383) T protein:vir:10 73 LNRLE-SPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ-----NLEHIPNSDVQINYLPGNM-GIVYTVLESNDRPKMVL 145 (383) T ss_pred hhhhh-CCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC-----ceeEeecCcceEEEEEcCC-ceEEEEEEcCCceEEEE Confidence 56665 89999999999999999999999999999875 4678899999888876554 45677777788889999 Q ss_pred cceeeEeeccCC---CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCC-CHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 153 FAHDVIHWKFFS---HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQL-SGDARQRARQEFEKMRE 228 (406) Q Consensus 153 ~~~~vih~r~~~---~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~ 228 (406) ++++|+|||+++ .++.+|+||+.++...|..+.++.+++.++|+||++|++++..++.. ++++.+++++.|++.++ T Consensus 146 ~~~evih~r~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~~e~~~~~~~~~~~~~~ 225 (383) T protein:vir:10 146 RQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKDLESAREEFEKANT 225 (383) T ss_pred cccceEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHHHHHHHHHhC Confidence 999999999754 34679999999999999999999999999999999999999998766 58899999999999999 Q ss_pred ccccCceeeccCCceeeeccCChhHHHHH-HHHHHHHHHHHHHhcCCHHHhccc----ccchhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 229 GSVGGSPLVFDSTMEYTPLEIDTNVLQLI-TSNNFSTAQIAKALRVPSYKLGVN----SPNQSVAQLMEDYVTNDLPFYF 303 (406) Q Consensus 229 g~~~~~~~vl~~g~~~~~l~~~~~d~~~~-e~~~~~~~~Ia~~fgvpp~~lg~~----~~~~n~~~~~~~~~~~~i~P~~ 303 (406) |.|+|+++++++|++|++++.+++|+|++ +.+++++++||++|||||++||.. .+++|.+++...| ..||.|++ T Consensus 226 ~~n~~~~~vl~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~~~sn~eq~~~~~-~~~l~P~~ 304 (383) T protein:vir:10 226 GDNSGRLMVLPDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHSNIDQIKATY-LANLNSYV 304 (383) T ss_pred ccccCCccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCCccccHHHHHHHH-HHHHHHHH Confidence 98999999999999999999999999975 899999999999999999999853 3567877776655 56999999 Q ss_pred HHHHHHHHhhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhc Q lcl|Aclame:pro 304 DAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKK 383 (406) Q Consensus 304 ~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~ 383 (406) +.||++|+++|++.. ..+.+...++.|.+++++.+.+++++|++|+||+|+++|++|+++ ||......+ T Consensus 305 ~~ie~~l~~~l~~~~--~~f~~~~l~~~d~~~~~~~~~~~~~~G~~t~nE~R~~lg~~p~~~--~d~~~~~~~------- 373 (383) T protein:vir:10 305 NPIVDELRLKMNAPD--LELDIKDMLDVDDSILINQVSNLAKSGVLGAEQAQFILTRSGFLP--DNLPEFKPL------- 373 (383) T ss_pred HHHHHHHHHhhCCce--EEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCcccC--CcccccCCC------- Confidence 999999999998642 112222234578899999999999999999999999999999954 554332222 Q ss_pred cccccccCcccCCCccC Q lcl|Aclame:pro 384 EEYQDKVGIKGKGGEVN 400 (406) Q Consensus 384 ~~~~~~~~~~~~gg~~~ 400 (406) ..+.+|||+. T Consensus 374 -------~~~~~gGd~e 383 (383) T protein:vir:10 374 -------TNETKGGDDK 383 (383) T ss_pred -------cccCCCCCCC Confidence 1244566644 No 64 >protein:vir:7407 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839924;genbank:gi:30089894;genbank:GeneID:1260681 Probab=100.00 E-value=7.9e-78 Score=443.29 Aligned_cols=372 Identities=21% Similarity=0.247 Sum_probs=297.2 Q ss_pred CcccccccCCCCc-------------chhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCccc Q lcl|Aclame:pro 1 MSFFQPLGTSKVS-------------YDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDII 67 (406) Q Consensus 1 M~~f~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 67 (406) ||||+++++...+ .+..+.+.+.+..+..+++.+||++++||+||++||++||++|+++++... T Consensus 3 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~v~~ia~~ia~lp~~~~~~~~--- 79 (392) T protein:vir:74 3 LPILNFINQTNDPPEAGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) T ss_pred chhhhhhhcccCcccccccccccccCchhhhhhhccCCCCcccchhhhhcchHHHHHHHHHHHhhccCceeeccchh--- Confidence 9998765443211 123455666667788899999999999999999999999999999986542 Q ss_pred ccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc-eEEEEEeec- Q lcl|Aclame:pro 68 HDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE-IVYTFTDML- 145 (406) Q Consensus 68 ~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~-~~~~~~~~~- 145 (406) ..|+.+||++||+++||+.++.+++++||+|++++++ ..|++++|+|++|+.|++..+.++. +.|.+.... T Consensus 80 ------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~-~~G~~~~L~~i~~~~v~v~~~~~~~~~~y~~~~~~~ 152 (392) T protein:vir:74 80 ------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRN-ANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDP 152 (392) T ss_pred ------hhhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEEC-CCCcEEEEEEEcCceeEEEEcCCCceEEEEEEecCC Confidence 2356799999999999999999999999999999998 4589999999999999999877664 455544332 Q ss_pred -CCeEEEEcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHH Q lcl|Aclame:pro 146 -TAKQVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEF 223 (406) Q Consensus 146 -~g~~~~~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~ 223 (406) .+..+.+++++|||+|+++.++ ++|+||+.++..+|..+.++.+++.++|+||+.|+++++.++...+++ +.+++| T Consensus 153 ~~~~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~~~~~~--~~~~~~ 230 (392) T protein:vir:74 153 KIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KDKASR 230 (392) T ss_pred ccceeEEEcCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchH--HHHHHH Confidence 3346789999999999887776 789999999999999999999999999999999999999877654433 334566 Q ss_pred HHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 224 EKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFY 302 (406) Q Consensus 224 ~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~ 302 (406) .+.+.| .++|+++||++|++|++++++++|+||+|++++++++||++|||||.+||..++..+.+++.++|++++|.|+ T Consensus 231 ~~~~~~~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~e~~~~~~~~~l~p~ 310 (392) T protein:vir:74 231 SRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRY 310 (392) T ss_pred HHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccHHHHHHHHHHHHHHHH Confidence 666655 5778899999999999999999999999999999999999999999999987766666788999999999999 Q ss_pred HHHHHHHHHhhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhh Q lcl|Aclame:pro 303 FDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDK 382 (406) Q Consensus 303 ~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~ 382 (406) +++||++|+++|++..+ +......+.+..++.+.+..++++|++|+||+|+++...++. + +......|+. T Consensus 311 ~~~ie~~l~~~l~~~~~---~~~~~~~~~d~~~~~~~~~~l~~~g~~t~near~~~~~~g~~-p--ne~r~~enl~---- 380 (392) T protein:vir:74 311 LRPAISELEYKLSDHIS---VNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYI-P--KDLPAPENTN---- 380 (392) T ss_pred HHHHHHHHHHhccchhc---ccchhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCC-c--cccchhcCCC---- Confidence 99999999999987532 222333456777888999999999999999999987322221 1 1122222322 Q ss_pred ccccccccCcccCCCccCCCCC Q lcl|Aclame:pro 383 KEEYQDKVGIKGKGGEVNAEED 404 (406) Q Consensus 383 ~~~~~~~~~~~~~gg~~~~~~~ 404 (406) +.+|||+|+.=. T Consensus 381 ----------~~~~Gd~~~p~p 392 (392) T protein:vir:74 381 ----------KKTTGQSNEPVP 392 (392) T ss_pred ----------CCCCCCCCCCCC Confidence 223444333333 No 65 >protein:vir:78310 Length: 376 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1850 # MgeName: B025 # Cross-refs: genbank:acc:YP_001468642;genbank:gi:157325220;genbank:GeneID:5601655 Probab=100.00 E-value=4.3e-78 Score=444.72 Aligned_cols=366 Identities=14% Similarity=0.087 Sum_probs=288.4 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKS 80 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~P 80 (406) ||||+++.++.... .+.. .......++...++++++|++||++||+++|++|+++++++ ....|+++++|+.+| T Consensus 1 Mg~f~~l~~~~~~~-~~~~---~~~~~~~~~~~~~l~~~~v~~~i~~Ia~~ia~~p~~~~~~~--~~~~~~l~~ll~~~P 74 (376) T protein:vir:78 1 MGFFSELFKRNKEI-EWMW---DLDFLEDKTTKVYLKKMALNTCVKHIARTIAKSDFRLKNGE--TSVRDKLYYKLNIRP 74 (376) T ss_pred CchhhhhhccCCcc-cccc---chhhccccchhhhhhhHHHHHHHHHHHHhhcccceeecccc--ccccchHHHHHhhcc Confidence 99998765443221 1111 11233457788899999999999999999999999999754 455789999999999 Q ss_pred cccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeEee Q lcl|Aclame:pro 81 TSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHW 160 (406) Q Consensus 81 n~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~ 160 (406) |++||+++||+.++.++++.||+|+++.++ ..|.+..++|+.+..+..... +.+.....+....+++++|+|+ T Consensus 75 N~~~t~~~f~~~~~~~lll~Gn~~~~~~r~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~evih~ 147 (376) T protein:vir:78 75 NTDMSSSSFWEKVIYKLIYDNECLIVLSDT-DDFLIADSYVRKEFAFFPDVF------EGVTVKDYRYNRNFSMDDVIFL 147 (376) T ss_pred ccCCCHHHHHHHHHHHHhHcCcEEEEEEeC-CCeeeccceeecccceeeeee------eeeeeecceeeeeeccccEEEe Confidence 999999999999999999999999999987 458899999999877654331 2222222333467999999999 Q ss_pred ccCCCCCcccc-CHHHHHHHHHHHHHHHHHHHHHH-HhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhccc--ccCcee Q lcl|Aclame:pro 161 KFFSHDTILGR-SPLLSLGDEIDLQTGGINTLIKF-FKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGS--VGGSPL 236 (406) Q Consensus 161 r~~~~~~~~G~-s~~~~~~~~i~~~~~~~~~~~~~-~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~--~~~~~~ 236 (406) |+...++.-.. ++...+...+. .....+ +.++.++.+++.....+++++.+++++.|++.++|. +.++++ T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~v~ 221 (376) T protein:vir:78 148 EYGNERLSAFTDGMFEDYGELFG------KMIRAQMRNFQIRGAVNFKMAGVADKDKQTKLQEYIDKVYASFNNNEIAIV 221 (376) T ss_pred ccCCCCchhhhhHHHHHHHHHHH------HHHHHHHhcCCCceeEEEccCCCCCHHHHHHHHHHHHHHhccccccCcceE Confidence 97655432222 22222222221 222233 344555555666778899999999999999999884 334477 Q ss_pred eccCCceeeeccCChhH-----HHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 237 VFDSTMEYTPLEIDTNV-----LQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSELG 311 (406) Q Consensus 237 vl~~g~~~~~l~~~~~d-----~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~ 311 (406) ++++|++|+++++++.+ +||+|.+++++++||++|||||.+|| ++++|++++.+.|+++||.|++++||++|| T Consensus 222 ~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVPp~~l~--~~~s~~e~~~~~f~~~~l~P~~~~ie~~l~ 299 (376) T protein:vir:78 222 PQLEGFNYEEFGTTSVNNSQSFDEVKKLRKEMIDYVASILGIPSSLLH--GDMADLSNNMKAYMEYCIDPLTKKLEDELN 299 (376) T ss_pred EcCCCceEEeeccCccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 89999999999988865 49999999999999999999999996 578899999999999999999999999999 Q ss_pred hhccCccchh-hhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcccccccc Q lcl|Aclame:pro 312 LKTLNDKDRR-LYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKV 390 (406) Q Consensus 312 ~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~ 390 (406) ++|+++.+.. .+++.+.++.|.+++++++.+++++|++|+||+|+++|+||+++++||++++|+|++|++... T Consensus 300 ~kll~~~~~~~~~~~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~lg~~p~~~g~~d~~~~~~n~~~~~~~~------ 373 (376) T protein:vir:78 300 AKLFTFSEFLAGEHIKIIHKKDIIENAEAVDKLVASGSFNRNEVRELLGAERVDNPELDKYLITKNYQSADEGG------ 373 (376) T ss_pred hhhCCcccceecccchhhcccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeeccCceehhccc------ Confidence 9999987653 356666678899999999999999999999999999999999999999999999999887321 Q ss_pred CcccCCCccCC Q lcl|Aclame:pro 391 GIKGKGGEVNA 401 (406) Q Consensus 391 ~~~~~gg~~~~ 401 (406) +|+ T Consensus 374 --------e~g 376 (376) T protein:vir:78 374 --------EDG 376 (376) T ss_pred --------cCC Confidence 122 No 66 >protein:vir:4828 Length: 382 # NCBI annotation: ORF24 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038325;genbank:gi:9634651;genbank:GeneID:1262630 Probab=100.00 E-value=2.5e-77 Score=440.51 Aligned_cols=369 Identities=24% Similarity=0.347 Sum_probs=301.3 Q ss_pred CcccccccCCCC-cch---hhHHHhhcCC--cccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHH Q lcl|Aclame:pro 1 MSFFQPLGTSKV-SYD---DYISSVLAGD--VSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINY 74 (406) Q Consensus 1 M~~f~~~~~~~~-~~~---~~~~~~~~~~--~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~ 74 (406) ||||+++..++. +.. ......+.+. ++..++..+++++++||+||++||++||++|+++++.. .. T Consensus 1 Mg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~v~~~i~~ia~~ia~~~~~~~~~~---------~~ 71 (382) T protein:vir:48 1 MPIFNLATESPPDNQGGFFDVVDSDFLASLKGNEWVSAETALRNSDLFSIINQLSNDLATVKLITSRKK---------LQ 71 (382) T ss_pred CccccccccCCcccccccccchhhhccccccCCcccchHhhhccHHHHHHHHHHHHhhccCceeeecch---------hh Confidence 999988654332 221 1111212221 34568888999999999999999999999999999653 23 Q ss_pred HhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcce-EEEEEee--cCCeEEE Q lcl|Aclame:pro 75 LLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI-VYTFTDM--LTAKQVK 151 (406) Q Consensus 75 lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~-~~~~~~~--~~g~~~~ 151 (406) .|+.+||++||+++||+.++.+++++||+|++++++ ..|++++|+|++|+.|++..+.++.. .|.+... ..+..+. T Consensus 72 ~L~~~PN~~~t~~~f~~~l~~~l~l~Gna~~~i~rd-~~G~~~~l~~i~~~~v~v~~~~~~~~~~y~~~~~~~~~~~~~~ 150 (382) T protein:vir:48 72 GIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRN-ENGRDMKWEYLRPSQVSFNRLDNKDGIYYNITFDDPRIPPKQH 150 (382) T ss_pred hhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEEC-CCCcEEEEEEEcCceeEEEEcCCCCeEEEEEEecCccccceeE Confidence 577899999999999999999999999999999998 55899999999999999988777654 4444332 2356788 Q ss_pred EcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 152 CFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGS 230 (406) Q Consensus 152 ~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~ 230 (406) +++++|||+|+++.++ ++|.||+.++..+|..+.++.++..++|+||+.|+++++.++.+++++.+++++.|.... . T Consensus 151 ~~~~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~e~~~~~~~~~~~~~--~ 228 (382) T protein:vir:48 151 VPQNDVLHFRLLSVDGGMTSVSPLMALSRELDIQKASGNLTINSLKNALNANGILKIKGGGLLDFKTKLSRSRQAMK--Q 228 (382) T ss_pred EcCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCChHHHHHHHHHHHhhc--c Confidence 9999999999887665 899999999999999999999999999999999999999999999999999999888754 4 Q ss_pred ccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 231 VGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSEL 310 (406) Q Consensus 231 ~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l 310 (406) ++|+++|+++|++|++++.++.|+||+|.+++.+++||++|||||.+||..+++++.+++.+.|++.+|.|++++|+++| T Consensus 229 n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVp~~~lg~~~~~~~~~~~~~~~~~~~l~p~~~~i~~~l 308 (382) T protein:vir:48 229 MQGGPLVLDDLEDFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPDNVVGGQGDQQSSLEMSSDLYSKAVSRYLRPFLSEL 308 (382) T ss_pred CCCCeeEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH Confidence 67899999999999999999999999999999999999999999999998888888899999999999999999999999 Q ss_pred HhhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC---CCCCCCeeeeccCccchhhccccc Q lcl|Aclame:pro 311 GLKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKS---TDPNMDRYQSSLNYVFLDKKEEYQ 387 (406) Q Consensus 311 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~---~~~~gd~~~~~~n~~~~~~~~~~~ 387 (406) +++|++..+.. ....+ +.+.......+..++.+|++|+||+|+.++..++ +.+.++. T Consensus 309 ~~~l~~~~~~~-~~~~~--~~~~~~~~~~~~~l~~~g~~t~~e~r~~l~~~g~~~~~~~~~~~----------------- 368 (382) T protein:vir:48 309 SQKLSCDVDAD-IFPAV--DPTGSNYISRINSLVKTGTLAQNQGLYILQQAEILPKELPNGEN----------------- 368 (382) T ss_pred HHHhcChhhhh-hhhhh--ccchhHHHHHHHHHhhcCccCHHHHHHHHhhCCCCCcchhhhhc----------------- Confidence 99998865432 12222 2233444556678899999999999999854332 1122211 Q ss_pred cccCcccCCCccCCCC Q lcl|Aclame:pro 388 DKVGIKGKGGEVNAEE 403 (406) Q Consensus 388 ~~~~~~~~gg~~~~~~ 403 (406) ...+.+|||+|+++ T Consensus 369 --~~~~~~GGd~~~~~ 382 (382) T protein:vir:48 369 --PNSTLKGGEEDGQD 382 (382) T ss_pred --CCCCCCCCCCCCCC Confidence 12346788887777 No 67 >protein:vir:98643 Length: 395 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1601 # MgeName: phi3396 # Cross-refs: genbank:acc:YP_001039921;genbank:gi:126011096;genbank:GeneID:4818479 Probab=100.00 E-value=8.9e-78 Score=443.01 Aligned_cols=380 Identities=14% Similarity=0.077 Sum_probs=291.9 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKS 80 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~P 80 (406) ||||+++..+........ ..+.....++...++++++||+||++||++||++|+++++.+++....|++.++|+.+| T Consensus 1 MGlf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~I~~ia~~iA~lp~~~~~~~~~~~~~~~~~~lL~~~P 77 (395) T protein:vir:98 1 MGILDFFSFKKSGTLSDD---DSGSTTSEKLTNVVLKEDALYKCVNYLARIISKSTFRLKTPEKLTENQKDWLYWINTKA 77 (395) T ss_pred CcchhhhcCCCccccccc---ccchhhhhhcchhhhhhHHHHHHHHHHHHHHhhCceeEEecCCcccccchHHHHHhhcC Confidence 999998765443222111 11222344677788999999999999999999999999998888888899999999999 Q ss_pred cccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeEee Q lcl|Aclame:pro 81 TSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHW 160 (406) Q Consensus 81 n~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~ 160 (406) ||+||+++||+.++.+++++||||++++++. . +++.+ ..+. .....+..++.+........+++++++|||+ T Consensus 78 N~~~t~~~f~~~~~~~lll~Gnayi~~~~~~-~-----~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~evih~ 149 (395) T protein:vir:98 78 NPNQSASQFWVEVIQKLLVDGETLIFVIPGK-G-----IYVAD-SFTQ-DKKISGSQFKVSRVQGQTYEKTFTFDQVIYL 149 (395) T ss_pred CCCCCHHHHHHHHHHHHhhcCceEEEEEeCC-c-----eecCC-cccc-cccccCcccceeeecCceeeeEecCccEEEe Confidence 9999999999999999999999999998863 2 22222 2221 1112222233333333334578999999999 Q ss_pred ccCCCCC-ccccCHHHHHHHHHHHHHHHH--HHHHHHHhcCCCcceEEeecCC-CCHHHHHHHHHHHHHHhccc--ccCc Q lcl|Aclame:pro 161 KFFSHDT-ILGRSPLLSLGDEIDLQTGGI--NTLIKFFKDGFSSGILTMKGAQ-LSGDARQRARQEFEKMREGS--VGGS 234 (406) Q Consensus 161 r~~~~~~-~~G~s~~~~~~~~i~~~~~~~--~~~~~~~~ng~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~g~--~~~~ 234 (406) |+++.++ .++.+++......+....... ....+++.++..+.+++..... .++++.++.++.+++.+++. ++++ T Consensus 150 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (395) T protein:vir:98 150 KNDNSDLMSKVESLWEEYGELLGHVINNQKIANQIRFTMIPPKDKVRERAQENSDGGRQSKSDKDFFKRTVEKIRTESVV 229 (395) T ss_pred cCCCCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHhhhhcCCcc Confidence 9876555 345555565555555444333 3445677777777777755544 45667778888888888764 3445 Q ss_pred eeeccCCceeeeccC------ChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 235 PLVFDSTMEYTPLEI------DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITS 308 (406) Q Consensus 235 ~~vl~~g~~~~~l~~------~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~ 308 (406) ++++++|++|+++++ +++++|+.+.+++++++||++|||||++|| ++++|.+++.+.|+++||.|++++||+ T Consensus 230 v~~l~~g~~~~~l~~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVP~~~l~--~~~sn~e~~~~~f~~~tl~P~~~~ie~ 307 (395) T protein:vir:98 230 GIPVTANTNYEEYGSKNTGAVKSYVDDIKKLKDQYMAEFAEMLGIPISLLH--GDIADNQKNYELLLEGPIESLITNIVD 307 (395) T ss_pred eeecCCCceeEecccccccccChhHHHHHHHHHHHHHHHHHHhCCCHHHhc--CCcccHHHHHHHHHHHHHHHHHHHHHH Confidence 778999999999985 467889999999999999999999999996 678899999999999999999999999 Q ss_pred HHHhhccCccchh-hhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccc Q lcl|Aclame:pro 309 ELGLKTLNDKDRR-LYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEE 385 (406) Q Consensus 309 ~l~~~l~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~ 385 (406) +|+++|+++.++. .++|+++ ++.|.+++++.+.+++++|++|+||+|+++|+||+++++||++++++|++|++. T Consensus 308 ~l~~kll~~~~~~~g~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~Pi~~~~gD~~~~~~n~~~~~~--- 384 (395) T protein:vir:98 308 GLEYAIFDKSETLQGSFIKVTGLKNYDLFSISNQADKLISSGFVFIDEVREEIGLPELPDGLGKVLYMTKNYESVLE--- 384 (395) T ss_pred HHHHhcCChhhhcCcceeeehhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeecccceeccc--- Confidence 9999999987643 2334443 567889999999999999999999999999999999999999999999999862 Q ss_pred cccccCcccCCCccCCCCCC Q lcl|Aclame:pro 386 YQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 386 ~~~~~~~~~~gg~~~~~~~~ 405 (406) +|||+|++.+. T Consensus 385 ---------~gge~~~~~~~ 395 (395) T protein:vir:98 385 ---------RGGEVDEEVET 395 (395) T ss_pred ---------ccCCCCCCCCC Confidence 56775554444 No 68 >protein:vir:80796 Length: 574 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504121;genbank:gi:158079308;genbank:GeneID:5666445 Probab=100.00 E-value=1.2e-76 Score=436.90 Aligned_cols=400 Identities=11% Similarity=0.055 Sum_probs=301.2 Q ss_pred Cccccc---ccCCC--CcchhhHHHhhcC-CcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc-------cc Q lcl|Aclame:pro 1 MSFFQP---LGTSK--VSYDDYISSVLAG-DVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD-------II 67 (406) Q Consensus 1 M~~f~~---~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~-------~~ 67 (406) |++.+. ...++ .++.+ +...+.. ..+..+.....+...+|++|+.+|+.++|+|||+++..+.+ .. T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~iv~~~i~~~~~~V~~~~~~i~~~ia~lp~~i~~kd~~~~~~~~~~~ 141 (574) T protein:vir:80 63 IGEMSVNPGYKTKPSIRNSQD-LHKTLKKFGNNIILNAIINTRSNQVSMYCKPARNSETGVGYEIRLKDIEAEPTSHDIA 141 (574) T ss_pred hhhccccccccCcCccCCccc-HHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEeccCCCccchhhh Confidence 222111 11111 11111 1111111 11222344445677889999999999999999999876432 33 Q ss_pred ccchHHHHhhh---hccccC-CHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcce----EE Q lcl|Aclame:pro 68 HDEDINYLLNV---KSTSNA-SARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI----VY 139 (406) Q Consensus 68 ~~~~~~~lL~~---~Pn~~~-~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~----~~ 139 (406) ..|++..+|.. .|||++ ++.+||+.++.+++++||+|++++++ ..|+|++|||++|..|++..+.++.. .. T Consensus 142 ~~~~l~~ll~~~~~~~nP~~~s~~ef~~~lv~~lll~Gnayi~i~r~-~~G~~~~L~pl~p~~V~v~~d~~~~~~~~~~~ 220 (574) T protein:vir:80 142 NIKRIESFLENTAQFRDPNRDNFTTFCKKLVRATYMYDQVNFEKVFD-KDGNFIKFDTVDPTTIFLATNGEGKLIKNGER 220 (574) T ss_pred hhhHHHHHHhccCCCCCCccccHHHHHHHHHHHHHhcCCeEEEEEEC-CCCcEEEEEEEcCceeEEEEcCccccccCceE Confidence 45777777742 466665 77899999999999999999999998 55899999999999999988766532 22 Q ss_pred EEEeecCCeEEEEcceeeEeeccCCC----CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecC--CCCH Q lcl|Aclame:pro 140 TFTDMLTAKQVKCFAHDVIHWKFFSH----DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGA--QLSG 213 (406) Q Consensus 140 ~~~~~~~g~~~~~~~~~vih~r~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~--~~~~ 213 (406) ++....++....+++++|||+|+++. ++.||+||+.++..+|..+.++.+++.++|+||+.|++++..+. .+++ T Consensus 221 y~~~~~g~~~~~~~~~eiih~~~~~~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~~ls~ 300 (574) T protein:vir:80 221 FVQVIDNRIVAKFNERELAFAVRNPRADIEVGQYGYPELEIALKQFIAHENTEVFNDRFFSHGGTTRGILHVKTGQQQSQ 300 (574) T ss_pred EEEEeCCceEEEEccccEEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCCH Confidence 34445566778899999999997653 35789999999999999999999999999999999999998753 4799 Q ss_pred HHHHHHHHHHHHHhcc-cccCce-eeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc--------- Q lcl|Aclame:pro 214 DARQRARQEFEKMREG-SVGGSP-LVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS--------- 282 (406) Q Consensus 214 e~~~~~~~~~~~~~~g-~~~~~~-~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~--------- 282 (406) ++++++++.|++.++| .++|++ +++++|++|+++++++.|+||+|++++++++||++|||||.+||... T Consensus 301 e~~~~lk~~~~~~~~G~~n~g~~~vl~~~G~~~~~l~~s~~D~qfle~~~~~~~~Ia~afgVPp~~lG~~~~~t~~gs~~ 380 (574) T protein:vir:80 301 QALDIFRREWRSSLAGINGSWQIPVVSAEDVKFVNMTPSANDMQFEKWLNYLINVISALYGIDPAEINFPNNGGATGSKG 380 (574) T ss_pred HHHHHHHHHHHHHhccccccccceeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccccccccccccc Confidence 9999999999999988 577885 56689999999999999999999999999999999999999998532 Q ss_pred ---cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhHHHHH--HHHHHHhCCCcCHHHHHHH Q lcl|Aclame:pro 283 ---PNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVD--EIVKLVNNQILTPNQGLVE 357 (406) Q Consensus 283 ---~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~t~NE~R~~ 357 (406) +++|++++.+.|++.||.|++++||++||++|++..+. .++++|+..+ +..+.+ .+..++.+||||+||+|++ T Consensus 381 ~~~n~sn~E~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~~-~~~~~f~~~d-~~~~~~~~~~~~~~~~G~lT~NE~R~~ 458 (574) T protein:vir:80 381 GSLNEGNSKEKMQASQNKGLQPLLRFIEDTVNTYIVAEFGE-KYQFQFRGGD-LSAQLDKLKIIEQEGKVFRTVNEIRHD 458 (574) T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC-ceEEEecccc-hhhHHHHHHHHHHHhCCccCHHHHHHH Confidence 45889999999999999999999999999999976543 4677777543 333322 3345788999999999999 Q ss_pred hCCCCCCCCCCCeeeeccCccchhhccccccccC----------cccCCCccC-----CCC-CCC Q lcl|Aclame:pro 358 LGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVG----------IKGKGGEVN-----AEE-DKS 406 (406) Q Consensus 358 ~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~----------~~~~gg~~~-----~~~-~~~ 406 (406) +|+||+ +|||++++|.|+++++.......... ....+++.. ... .++ T Consensus 459 lgl~Pi--~gGD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 521 (574) T protein:vir:80 459 KGLEPI--KGGDVILNGVHIQAIGQALQEEQLEYQRSQDRLNRLLELSGGDVEQPEPEEPKDSQN 521 (574) T ss_pred hCCCCC--CCCCEeeeccceeecccccccccCCccchhccccccccccCCCCCCCCCCCCCCccc Confidence 999999 67999999999999986543211100 000111100 000 001 No 69 >protein:vir:94002 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1487 # MgeName: jj50 # Cross-refs: genbank:acc:YP_764318;genbank:gi:115315632;genbank:GeneID:5176589 Probab=100.00 E-value=1.2e-77 Score=442.29 Aligned_cols=355 Identities=16% Similarity=0.115 Sum_probs=280.8 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc--------ccccchH Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD--------IIHDEDI 72 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~--------~~~~~~~ 72 (406) ||||++..+......... ............++..++|++||++||++||++|+++++.++. ....|++ T Consensus 1 Mg~f~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~v~~IA~~iA~lp~~~~~~~~~~~~~~~~~~~~~~~l 76 (378) T protein:vir:94 1 MNLFGKVVSFSRGKLNND----TQRVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGSDTLISMAGSDL 76 (378) T ss_pred CCccccchhcccccccCC----cceeeeeccchhHHHHHHHHHHHHHHHhhhhhCceeeEEEcccCcccccccccccchH Confidence 999988643221111100 0011112223345678899999999999999999998764321 3456999 Q ss_pred HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEE Q lcl|Aclame:pro 73 NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKC 152 (406) Q Consensus 73 ~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~ 152 (406) ++||+.+||++||+++||+.++.+++++||+|++++++...|.++.++|.. ..+.| T Consensus 77 ~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~~~~~g~~~~l~p~~------------------------~~~~~ 132 (378) T protein:vir:94 77 DEVLNWSPKGERNSMDFWRKVIKKLLSAPYVDLYAVFDDNTGELLDLLFAD------------------------DKKEY 132 (378) T ss_pred HHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeeCCCceEEEEEecC------------------------CeeEe Confidence 999999999999999999999999999999999998877777777665521 12457 Q ss_pred cceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHh----c Q lcl|Aclame:pro 153 FAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMR----E 228 (406) Q Consensus 153 ~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~----~ 228 (406) ++++|||+|. +.++..|.||++.+...+..+ ++++ .++++++.+..+++++.++++++|++.+ + T Consensus 133 ~~~diiH~~~-~~~~~~g~s~l~~~~~~i~~~----------~~~~-~~~gil~~~~~l~~~~~~~~~~~~~~~~~~~~~ 200 (378) T protein:vir:94 133 KPEELVRLTS-PFYINEDTSILDNALASIQTK----------LEQG-KLRGLLKINAFLDIDNTQEYREKALTTIKNMQE 200 (378) T ss_pred eeeeeEEecC-cCCccchhHHHHHHHHHHHHH----------Hhcc-cccceeeeCCcCCHHHHHHHHHHHHHHHHHhhc Confidence 8899999996 356778999999888876533 3444 5778899999999887777666666655 5 Q ss_pred ccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 229 GSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITS 308 (406) Q Consensus 229 g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~ 308 (406) |++++++++|++|++|+++++++.++++ +.+++++++||++|||||.+|+ +++++++.+.|++++|.||+++||+ T Consensus 201 ~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVP~~~l~----~~~se~~~~~f~~~tL~P~~~~ie~ 275 (378) T protein:vir:94 201 GSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILL----GTASQEQQIYFYNSTIIPLLIQLEK 275 (378) T ss_pred ccccccceecCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhc----CChHHHHHHHHHHHHHHHHHHHHHH Confidence 6778889999999999999999999996 6678999999999999999994 3345789999999999999999999 Q ss_pred HHHhhccCccchhhh-------hhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCc Q lcl|Aclame:pro 309 ELGLKTLNDKDRRLY-------HIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNY 377 (406) Q Consensus 309 ~l~~~l~~~~~~~~~-------~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~ 377 (406) +|+++||++.++... .++|++ +.+.+++++.+.+++++||+|+||+|+++|+||+ |+||++++|+|+ T Consensus 276 ~l~~~Ll~~~er~~g~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~--~gGD~~~~~~n~ 353 (378) T protein:vir:94 276 ELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGEQPI--EGGDVYIANLNA 353 (378) T ss_pred HHHhhcCChhHhhhhhhcccccceeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCeeeecccc Confidence 999999998765321 244553 5677899999999999999999999999999999 569999999999 Q ss_pred cchhhccccccccCcccCCCccCCC Q lcl|Aclame:pro 378 VFLDKKEEYQDKVGIKGKGGEVNAE 402 (406) Q Consensus 378 ~~~~~~~~~~~~~~~~~~gg~~~~~ 402 (406) +|++.....+...++..+++|+|++ T Consensus 354 ~~~~~~~~~~~~~~~~~~~~e~~n~ 378 (378) T protein:vir:94 354 VAVKNLSDLQGSRKDVTSTDETNNQ 378 (378) T ss_pred cccccchhhcCCcCCCCCCCCCCCC Confidence 9999887766665555556665555 No 70 >protein:vir:1023 Length: 392 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076677;genbank:gi:13095786;genbank:GeneID:920364 Probab=100.00 E-value=5.9e-77 Score=438.50 Aligned_cols=369 Identities=21% Similarity=0.247 Sum_probs=296.6 Q ss_pred CcccccccCCCC-------------cchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCccc Q lcl|Aclame:pro 1 MSFFQPLGTSKV-------------SYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDII 67 (406) Q Consensus 1 M~~f~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 67 (406) ||||+++.+... .....+.+.+.+.++..++...||++++|++||++||++||++|+++++.+. T Consensus 3 m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~--- 79 (392) T protein:vir:10 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) T ss_pred chhhhhhhcccccccccccccccccCchhhhhhhhcCCCCceechHHhhccHHHHHHHHHHHHhhccCceeeccchh--- Confidence 999986543211 1223345666677788899999999999999999999999999999986542 Q ss_pred ccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc-eEEEEEeec- Q lcl|Aclame:pro 68 HDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE-IVYTFTDML- 145 (406) Q Consensus 68 ~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~-~~~~~~~~~- 145 (406) ..|+.+||++||+++||+.++.+++++||+|++++++ ..|++++|+|++|+.|++..+.++. +.|.+.... T Consensus 80 ------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~-~~g~~~~L~~l~~~~v~~~~~~~~~~~~y~~~~~~~ 152 (392) T protein:vir:10 80 ------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRN-ANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDP 152 (392) T ss_pred ------hhHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEEC-CCCcEEEEEEEcCceeEEEEcCCCceEEEEEEecCc Confidence 3466799999999999999999999999999999998 5589999999999999998877664 444444332 Q ss_pred -CCeEEEEcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHH Q lcl|Aclame:pro 146 -TAKQVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEF 223 (406) Q Consensus 146 -~g~~~~~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~ 223 (406) .+....+++++|||+|+++.++ ++|+||+.++..+|..+.++.++..++|+||+.|+++++.++....++ +.+++| T Consensus 153 ~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~--~~~~~~ 230 (392) T protein:vir:10 153 KIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KDKASR 230 (392) T ss_pred ccceeEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchH--HHHHHH Confidence 3346789999999999987776 789999999999999999999999999999999999999877654332 334566 Q ss_pred HHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 224 EKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFY 302 (406) Q Consensus 224 ~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~ 302 (406) .+.+.| .++|+++++++|++|++++.+++|+||++.+++++++||++|||||.+||...++.+.+++.++|+++||.|+ T Consensus 231 ~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~~~~~~~~f~~~~l~P~ 310 (392) T protein:vir:10 231 SRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRY 310 (392) T ss_pred HHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccHHHHHHHHHHHHHHHH Confidence 666655 5778899999999999999999999999999999999999999999999987766667788999999999999 Q ss_pred HHHHHHHHHhhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCCCCCCCeeeeccCccc Q lcl|Aclame:pro 303 FDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVEL---GKQKSTDPNMDRYQSSLNYVF 379 (406) Q Consensus 303 ~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~---g~~p~~~~~gd~~~~~~n~~~ 379 (406) ++.||++++++|++..+ +......+.+..++.+.+.+++++|++|+||+|+++ |+.|.+ +....|+- T Consensus 311 ~~~ie~~l~~~L~~~~~---~d~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~g~~p~e------~r~~e~l~- 380 (392) T protein:vir:10 311 LRPAISELEYKLSDHIS---VNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD------LPAPENTN- 380 (392) T ss_pred HHHHHHHHHHhcccccc---ccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHHhcCCCccc------cchhcCCC- Confidence 99999999999987532 222333455677888899999999999999999987 554421 11122221 Q ss_pred hhhccccccccCcccCCCccCCCCC Q lcl|Aclame:pro 380 LDKKEEYQDKVGIKGKGGEVNAEED 404 (406) Q Consensus 380 ~~~~~~~~~~~~~~~~gg~~~~~~~ 404 (406) +.+|||+|+.-. T Consensus 381 -------------~~~~Gd~~~p~p 392 (392) T protein:vir:10 381 -------------KKTTGQSNEPVP 392 (392) T ss_pred -------------CCCCCCCCCCCC Confidence 233444444444 No 71 >protein:vir:3989 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116497;genbank:gi:14251130;genbank:GeneID:921299 Probab=100.00 E-value=5.9e-77 Score=438.50 Aligned_cols=369 Identities=21% Similarity=0.247 Sum_probs=296.6 Q ss_pred CcccccccCCCC-------------cchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCccc Q lcl|Aclame:pro 1 MSFFQPLGTSKV-------------SYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDII 67 (406) Q Consensus 1 M~~f~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 67 (406) ||||+++.+... .....+.+.+.+.++..++...||++++|++||++||++||++|+++++.+. T Consensus 3 m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~--- 79 (392) T protein:vir:39 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) T ss_pred chhhhhhhcccccccccccccccccCchhhhhhhhcCCCCceechHHhhccHHHHHHHHHHHHhhccCceeeccchh--- Confidence 999986543211 1223345666677788899999999999999999999999999999986542 Q ss_pred ccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc-eEEEEEeec- Q lcl|Aclame:pro 68 HDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE-IVYTFTDML- 145 (406) Q Consensus 68 ~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~-~~~~~~~~~- 145 (406) ..|+.+||++||+++||+.++.+++++||+|++++++ ..|++++|+|++|+.|++..+.++. +.|.+.... T Consensus 80 ------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~-~~g~~~~L~~l~~~~v~~~~~~~~~~~~y~~~~~~~ 152 (392) T protein:vir:39 80 ------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRN-ANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDP 152 (392) T ss_pred ------hhHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEEC-CCCcEEEEEEEcCceeEEEEcCCCceEEEEEEecCc Confidence 3466799999999999999999999999999999998 5589999999999999998877664 444444332 Q ss_pred -CCeEEEEcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHH Q lcl|Aclame:pro 146 -TAKQVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEF 223 (406) Q Consensus 146 -~g~~~~~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~ 223 (406) .+....+++++|||+|+++.++ ++|+||+.++..+|..+.++.++..++|+||+.|+++++.++....++ +.+++| T Consensus 153 ~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~--~~~~~~ 230 (392) T protein:vir:39 153 KIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KDKASR 230 (392) T ss_pred ccceeEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchH--HHHHHH Confidence 3346789999999999987776 789999999999999999999999999999999999999877654332 334566 Q ss_pred HHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 224 EKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFY 302 (406) Q Consensus 224 ~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~ 302 (406) .+.+.| .++|+++++++|++|++++.+++|+||++.+++++++||++|||||.+||...++.+.+++.++|+++||.|+ T Consensus 231 ~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~~~~~~~~f~~~~l~P~ 310 (392) T protein:vir:39 231 SRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRY 310 (392) T ss_pred HHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccHHHHHHHHHHHHHHHH Confidence 666655 5778899999999999999999999999999999999999999999999987766667788999999999999 Q ss_pred HHHHHHHHHhhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCCCCCCCeeeeccCccc Q lcl|Aclame:pro 303 FDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVEL---GKQKSTDPNMDRYQSSLNYVF 379 (406) Q Consensus 303 ~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~---g~~p~~~~~gd~~~~~~n~~~ 379 (406) ++.||++++++|++..+ +......+.+..++.+.+.+++++|++|+||+|+++ |+.|.+ +....|+- T Consensus 311 ~~~ie~~l~~~L~~~~~---~d~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~g~~p~e------~r~~e~l~- 380 (392) T protein:vir:39 311 LRPAISELEYKLSDHIS---VNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD------LPAPENTN- 380 (392) T ss_pred HHHHHHHHHHhcccccc---ccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHHhcCCCccc------cchhcCCC- Confidence 99999999999987532 222333455677888899999999999999999987 554421 11122221 Q ss_pred hhhccccccccCcccCCCccCCCCC Q lcl|Aclame:pro 380 LDKKEEYQDKVGIKGKGGEVNAEED 404 (406) Q Consensus 380 ~~~~~~~~~~~~~~~~gg~~~~~~~ 404 (406) +.+|||+|+.-. T Consensus 381 -------------~~~~Gd~~~p~p 392 (392) T protein:vir:39 381 -------------KKTTGQSNEPVP 392 (392) T ss_pred -------------CCCCCCCCCCCC Confidence 233444444444 No 72 >protein:vir:1661 Length: 378 # NCBI annotation: unknown # Family: family:all:2379 # MgeID: mge:34 # MgeName: sk1 # Cross-refs: genbank:acc:NP_044950;genbank:gi:9629657;genbank:GeneID:1261302 Probab=100.00 E-value=2.3e-77 Score=440.75 Aligned_cols=355 Identities=16% Similarity=0.110 Sum_probs=279.6 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc--------ccccchH Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD--------IIHDEDI 72 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~--------~~~~~~~ 72 (406) ||||++..+-...... ..............++..++|++||++||++||+|||++++.++. ....|++ T Consensus 1 Mg~f~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~i~~Ia~~iA~l~~~~~~~~~~~~~~~~~~~~~~~~l 76 (378) T protein:vir:16 1 MNLFGKVVSFSRGKLN----NDTQRVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGSDTLISMAGSDL 76 (378) T ss_pred Cccchhhhhhhccccc----CCcceeeecccchhhHHHHHHHHHHHHHHhhhhhCceeEEEEcccccccccccccccchH Confidence 9999886542211111 001111112233356788899999999999999999998865332 2356999 Q ss_pred HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEE Q lcl|Aclame:pro 73 NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKC 152 (406) Q Consensus 73 ~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~ 152 (406) +++|+.+||++||+++||+.++.+++++||+|++++++...|.++.++|.. ..+.| T Consensus 77 ~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~d~~~g~~~~l~~~~------------------------~~~~~ 132 (378) T protein:vir:16 77 DEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFAD------------------------DKKEY 132 (378) T ss_pred HHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEecC------------------------CeeEe Confidence 999999999999999999999999999999999999987666666555432 13457 Q ss_pred cceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHh----c Q lcl|Aclame:pro 153 FAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMR----E 228 (406) Q Consensus 153 ~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~----~ 228 (406) ++++|||||. +.++..|.|++..+...+.. .++++ .+++++..+..+++++.++.+++|++.+ + T Consensus 133 ~~~diih~r~-~~~~~~~~s~l~~~~~~i~~----------~~~~~-~~~g~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 200 (378) T protein:vir:16 133 KPEELVRLTS-PFYINEDTSILDNALASIQT----------KLEQG-KLRGLLKINAFLDIDNTQEYREKALTTIKNMQE 200 (378) T ss_pred cccceEEecC-ccCccchhHHHHHHHHHHHH----------HHhcC-ccceeeEeCCcCCHHHHHHHHHHHHHHHHHhhc Confidence 8899999995 45667789998888776542 34444 5678888888888887666666666554 6 Q ss_pred ccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 229 GSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITS 308 (406) Q Consensus 229 g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~ 308 (406) |.++|++++|++|++|+++++++.++++ +.+++++++||++|||||.+|+ +++.+++.++|+++||.||+++||+ T Consensus 201 ~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~----g~~~e~~~~~f~~~tl~P~~~~ie~ 275 (378) T protein:vir:16 201 GSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILL----GTASQEQQIYFYNSTIIPLLIQLEK 275 (378) T ss_pred ccccccceEcCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhc----CCchHHHHHHHHHHHHHHHHHHHHH Confidence 6788899999999999999999999997 4568999999999999999994 3445789999999999999999999 Q ss_pred HHHhhccCccchhhh-------hhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCc Q lcl|Aclame:pro 309 ELGLKTLNDKDRRLY-------HIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNY 377 (406) Q Consensus 309 ~l~~~l~~~~~~~~~-------~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~ 377 (406) +|+++||++.++... .++|++ +.+.+++++.+.+++++|++|+||+|+++|+||+ |+||++++|+|+ T Consensus 276 ~l~~kLl~~~e~~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~--~ggD~~~~~~n~ 353 (378) T protein:vir:16 276 ELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGEQPI--EGGDVYIANLNA 353 (378) T ss_pred HHHhhcCChhhhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCeEeecccc Confidence 999999998765321 245554 5567899999999999999999999999999999 669999999999 Q ss_pred cchhhccccccccCcccCCCccCCC Q lcl|Aclame:pro 378 VFLDKKEEYQDKVGIKGKGGEVNAE 402 (406) Q Consensus 378 ~~~~~~~~~~~~~~~~~~gg~~~~~ 402 (406) +|++.....+...++..+|+|+|++ T Consensus 354 ~~~~~~~~~~~~~~~~~~~~e~~ne 378 (378) T protein:vir:16 354 VAVKNLSDLQGSRKDVTSTDETNNQ 378 (378) T ss_pred ccccchhhhcCccCCCCCCCCCCCC Confidence 9999887766665555666666665 No 73 >protein:vir:93867 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1479 # MgeName: 712 # Cross-refs: genbank:acc:YP_764264;genbank:gi:115315577;genbank:GeneID:5141561 Probab=100.00 E-value=2.8e-77 Score=440.28 Aligned_cols=355 Identities=16% Similarity=0.111 Sum_probs=279.9 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc--------ccccchH Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD--------IIHDEDI 72 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~--------~~~~~~~ 72 (406) ||||++..+-...... ..............++..++|++||++||++||++|+++++.++. ....|++ T Consensus 1 Mg~f~~~~~f~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~i~~Ia~~iA~lp~~~~~~~~~~~~~~~~~~~~~~~l 76 (378) T protein:vir:93 1 MNLFGKVVSFSRGKLN----NDTQRVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGSDTLISMAGSDL 76 (378) T ss_pred CccchhhhhhhccccC----CCcceeeecccchhHHHHHHHHHHHHHHHhhhhhCceeeEEEcccccccccccccccchH Confidence 9999886532111100 000111112223346778899999999999999999998875332 2356899 Q ss_pred HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEE Q lcl|Aclame:pro 73 NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKC 152 (406) Q Consensus 73 ~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~ 152 (406) ++||+.+||++||+++||+.++.+++++||+|++++++...|.++.++|.. ..++| T Consensus 77 ~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~i~~~~~~~~g~~~~l~~~~------------------------~~~~~ 132 (378) T protein:vir:93 77 DEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFAD------------------------DKKEY 132 (378) T ss_pred HHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEecC------------------------CeeEe Confidence 999999999999999999999999999999999999886667666655421 23467 Q ss_pred cceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHh----c Q lcl|Aclame:pro 153 FAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMR----E 228 (406) Q Consensus 153 ~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~----~ 228 (406) ++++|||+|. +.++..|.|++..+...+. +++++| .++++++.+..+++++.++.+++|++.+ + T Consensus 133 ~~~diih~r~-~~~~~~~~s~l~~~~~~i~----------~~~~~~-~~~g~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 200 (378) T protein:vir:93 133 KTEELVRLTS-PFYINEDTSILDNALASIQ----------TKLEQG-KLRGLLKINAFLDIDNTQEYREKALTTIKNMQE 200 (378) T ss_pred ccceeEEecC-ccccchhhHHHHHHHHHHH----------HHHhcC-cccceeeeCCcCCHHHHHHHHHHHHHHHHHhhc Confidence 8999999995 4566778999888776653 345555 4778888888888887777666666654 5 Q ss_pred ccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 229 GSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITS 308 (406) Q Consensus 229 g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~ 308 (406) |.++++++++++|++|++++.++.++|+ +.+++++++||++|||||.+|+ +++.+++...|++.+|.|++++||+ T Consensus 201 ~~~~~~~~~l~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~----g~~~e~~~~~f~~~tl~P~~~~ie~ 275 (378) T protein:vir:93 201 GSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILL----GTATQEQQIYFYNSTIIPLLIQLEK 275 (378) T ss_pred ccccccceEcCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhc----CCcHHHHHHHHHHHHHHHHHHHHHH Confidence 6678889999999999999999999997 6678999999999999999994 3445789999999999999999999 Q ss_pred HHHhhccCccchhh-------hhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCc Q lcl|Aclame:pro 309 ELGLKTLNDKDRRL-------YHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNY 377 (406) Q Consensus 309 ~l~~~l~~~~~~~~-------~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~ 377 (406) +|+++||+..++.. ..++|++ +.|.+++++++.+++++|++|+||+|+++|+||+ |+||++++|+|+ T Consensus 276 ~l~~kLl~~~er~~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~--~ggD~~~~~~n~ 353 (378) T protein:vir:93 276 ELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGEQPI--EGGDVYIANLNA 353 (378) T ss_pred HHHhhcCChhHhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCeeeecccc Confidence 99999999876542 2255554 5677899999999999999999999999999999 569999999999 Q ss_pred cchhhccccccccCcccCCCccCCC Q lcl|Aclame:pro 378 VFLDKKEEYQDKVGIKGKGGEVNAE 402 (406) Q Consensus 378 ~~~~~~~~~~~~~~~~~~gg~~~~~ 402 (406) +|++.....+...++..+++|+|++ T Consensus 354 ~~~~~~~~~~~~~~~~~~~~e~~n~ 378 (378) T protein:vir:93 354 VAVKNLSDLQGSRKDVTSTDETNNQ 378 (378) T ss_pred ccccchhhhcCccCCCCCCCCCCCC Confidence 9999887766655555555555555 No 74 >protein:vir:4952 Length: 386 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049928;genbank:gi:9632899;genbank:GeneID:1262075 Probab=100.00 E-value=1e-75 Score=431.65 Aligned_cols=373 Identities=22% Similarity=0.332 Sum_probs=301.8 Q ss_pred CcccccccCCCCc---chhhHHHhh------cCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccch Q lcl|Aclame:pro 1 MSFFQPLGTSKVS---YDDYISSVL------AGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDED 71 (406) Q Consensus 1 M~~f~~~~~~~~~---~~~~~~~~~------~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 71 (406) |+||+++++.+.+ ..+.+.... ....+..++..+++++|+|++||++||++||++|+++++.. T Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~~p~~~~~~~-------- 72 (386) T protein:vir:49 1 MPIFNITNLATESPPINQESFFDIADSDFLASLNSSEWVSAENALKNSDLFSIISQLSNDLATAKITTSRKQ-------- 72 (386) T ss_pred CchhhhhccCCCCcccchhhhhhhhhccccccccCCceechhhhhccHHHHHHHHHHHHHhhhCceeeccch-------- Confidence 9999876543321 122222211 11134568899999999999999999999999999998643 Q ss_pred HHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc-eEEEEEe--ecCCe Q lcl|Aclame:pro 72 INYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE-IVYTFTD--MLTAK 148 (406) Q Consensus 72 ~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~-~~~~~~~--~~~g~ 148 (406) ...|+.+||++||+++||+.++.+++++||+|++++++ ..|++++++|++|+.|++..+.++. ++|.+.. ...+. T Consensus 73 -~~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~-~~g~~~~l~~i~~~~v~v~~~~~~~~~~y~~~~~~~~~~~ 150 (386) T protein:vir:49 73 -LQGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRN-DNGRDMKWEYLRPSQVSFNRLDNQNGLYYNITFDDPHIAP 150 (386) T ss_pred -hhhhhhccCCCCCHHHHHHHHHHHhhhcCCEEEEEEEC-CCCcEEEEEEecCceeEEEEcCCCceEEEEEEEcCccccc Confidence 23466799999999999999999999999999999998 5589999999999999998877664 4454443 24566 Q ss_pred EEEEcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHh Q lcl|Aclame:pro 149 QVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMR 227 (406) Q Consensus 149 ~~~~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 227 (406) .+.+++++|||||.++.++ ++|+||+.++..++..+.++.+++.++|+||+.|+++++.++..++++.+++++.|.... T Consensus 151 ~~~~~~~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~ 230 (386) T protein:vir:49 151 KQHVPQNDILHFRLLSVDGGLTSVSPLMALGREFNIQKASDKLTISALKNALNANGILKIKGGGLLDFKTKVSRSRQAMK 230 (386) T ss_pred eeEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEeCCCCChHHHHHHHHHHHHhc Confidence 7899999999999876665 899999999999999999999999999999999999999999999999999999887654 Q ss_pred cccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 228 EGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAIT 307 (406) Q Consensus 228 ~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie 307 (406) .++|+++++++|++|++++.+++|+||+|++++++++||++|||||.+||...+..+..++.+.|+..+|.|+++.|+ T Consensus 231 --~n~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~~~~~~~~~~i~~~l~~i~ 308 (386) T protein:vir:49 231 --QMQGGPLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESIVGGDGDQQSSLEMIYNIYFKSVSRYLRPFV 308 (386) T ss_pred --cCCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCccchHHHHHHHHHHHHHHHHHHHH Confidence 578899999999999999999999999999999999999999999999997554333345667899999999999999 Q ss_pred HHHHhhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccc Q lcl|Aclame:pro 308 SELGLKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQ 387 (406) Q Consensus 308 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~ 387 (406) ++|+++|++..+ +.....++.+.+.+...+.+++++|++|+||+|++++..++.. .+.. .. . T Consensus 309 ~~~~~~l~~~~~---~~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~~~~~--~~~~---~~----------~ 370 (386) T protein:vir:49 309 SEMSKKLSCEVD---VDISPAVDPTGSNYISLINSMVKSGTLAQNQGLYILQQAEILP--KELP---DG----------K 370 (386) T ss_pred HHHHHHhcchhc---ccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhhCCCCC--CcCc---ch----------h Confidence 999999975321 1222234556778888899999999999999999998766522 2211 10 1 Q ss_pred cccCcccCCCccCCCC Q lcl|Aclame:pro 388 DKVGIKGKGGEVNAEE 403 (406) Q Consensus 388 ~~~~~~~~gg~~~~~~ 403 (406) .......||||+|+++ T Consensus 371 ~~~~~~~~gGd~~~~~ 386 (386) T protein:vir:49 371 NPNRTSLKGGEINEQD 386 (386) T ss_pred ccCCCCCCCCCCCCCC Confidence 2223467788877665 No 75 >protein:vir:100691 Length: 535 # NCBI annotation: hypothetical protein # Family: family:all:2446 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164747;genbank:gi:56693160;genbank:GeneID:3197324 Probab=100.00 E-value=4e-74 Score=422.99 Aligned_cols=400 Identities=11% Similarity=0.041 Sum_probs=292.1 Q ss_pred Cc----ccccccCC--CCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC-----ccccc Q lcl|Aclame:pro 1 MS----FFQPLGTS--KVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG-----DIIHD 69 (406) Q Consensus 1 M~----~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~-----~~~~~ 69 (406) |. +|+.+.+. ..++.+++ ..+.+.+.....-..+....++|+|+.++++.++++|+++++.+. +.... T Consensus 53 ~~~~~~g~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~i~t~~~~va~~~~i~~~s~~~~~~~i~l~~~~~~~~~~~~~~~ 131 (535) T protein:vir:10 53 ADGNVAGQYSVASISDVLSTKKLL-KAYADNDIVQAIIRTRTNQVLTYSNPSRYNRNGVGFKVELKDATKVMSKAQIKRA 131 (535) T ss_pred ccCCcccccccCccccccCHHHHH-HHhccChhHHHHHHHHHHHHHHHHHHHHHhcccCcceeEEEeccCCCcchhhhhh Confidence 22 34333222 22333332 223333322222345567788999999999999999999997643 24456 Q ss_pred chHHHHhhhhccccCCHHH----HHHHHHHHHHhc-CCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc--eEEEEE Q lcl|Aclame:pro 70 EDINYLLNVKSTSNASART----WKFAMAVNAILT-GNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE--IVYTFT 142 (406) Q Consensus 70 ~~~~~lL~~~Pn~~~~~~~----f~~~~~~~~~l~-G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~--~~~~~~ 142 (406) |++.++|+.+||+++++++ |++.++.+++++ |++|++++++ ..|+|++|||++|..|++..+..+. ..+++. T Consensus 132 ~~l~~lL~~~PN~~~~~~~~~~~~~~~lv~d~l~~~g~ay~~i~r~-~~G~~~~L~~l~p~~V~v~~d~~~~~~~~~~~~ 210 (535) T protein:vir:10 132 HEIEDFIYNTGSEYYEWRDTFPRLLTKIINDMYVQDQINIERIFKN-DSNELDHFNAVDASKVVISYSPRSKDQPRKFEQ 210 (535) T ss_pred hHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHhhCCceEEEEEEC-CCCcEEEEEEeCCceeEEEEcCccccCceEEEE Confidence 8888999999999999876 556667776655 5789999997 5589999999999999998875552 223444 Q ss_pred eecCCeEEEEcceeeEeeccCCC----CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecC----CCCHH Q lcl|Aclame:pro 143 DMLTAKQVKCFAHDVIHWKFFSH----DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGA----QLSGD 214 (406) Q Consensus 143 ~~~~g~~~~~~~~~vih~r~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~----~~~~e 214 (406) ...++....|++++|||||+++. ++.+|+||+.++..+|..+.++.++..++|+||++|++++..+. .++++ T Consensus 211 ~~~~~~~~~~~~~eiih~~~~~~~~~~~~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~ng~~p~giL~~~~~~~~~ls~e 290 (535) T protein:vir:10 211 FVSETKSVKFSERNLTFINYWNLSDTDRRGYGYSPVEASIPLIRAIYDTEQFNARFFSQGGTTRGILVIDQDGDAQANQM 290 (535) T ss_pred EecCceeEEECcccEEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCcccCHH Confidence 45566778899999999997653 35689999999999999999999999999999999999998764 47899 Q ss_pred HHHHHHHHHHHHhcc-cccCceeec-cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc--cc------ Q lcl|Aclame:pro 215 ARQRARQEFEKMREG-SVGGSPLVF-DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS--PN------ 284 (406) Q Consensus 215 ~~~~~~~~~~~~~~g-~~~~~~~vl-~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~--~~------ 284 (406) +++++++.|++.++| .++++++|+ ++|++|+++++++.|+||+|++++++++||++|||||.+||... ++ T Consensus 291 ~~e~lk~~~~~~~~G~~nag~~~vl~~~g~~~~~l~~~~~D~qfle~~~~~~~eIa~afgVPp~~lG~~~~at~sn~~~~ 370 (535) T protein:vir:10 291 MLAGIRRQWTSQGSGLGGAWKIPILAAKDAKFVNMTQNSRDMEFDKFLNFMIYDTAAIFQMQPEEINFPNNGGSTGKSGT 370 (535) T ss_pred HHHHHHHHHHHHhcCcccccccccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccccCcccccchhh Confidence 999999999999988 577886655 57999999999999999999999999999999999999999632 22 Q ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 285 ------QSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLV 356 (406) Q Consensus 285 ------~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~ 356 (406) +++|++...|++.+|.||+++||++||++|++..+. .++++|+ .+.+.+++.+.++. ..+|+||+||+|+ T Consensus 371 ~~~~~~s~~E~~~~~~~~~~L~P~l~~ie~~ln~~Ll~~~~~-~~~f~f~~l~~~d~~~r~~~~~~-~~~g~lT~NE~R~ 448 (535) T protein:vir:10 371 KSVNEGSTAKAKLESSKDKGLTPLLSFIEQVINDKIMRYVDT-DYRFSFTLGDAQDKLQEEQVWKL-KLANGYFINEYRK 448 (535) T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC-eEEEEeccccccCHHHHHHHHHH-HHcCCCCHHHHHH Confidence 456888889999999999999999999999986554 3444553 45566677766654 4467899999999 Q ss_pred HhCCCCCCCCCCCeeeecc---CccchhhccccccccCcc--------------------cCCCccCCCCCC-----C Q lcl|Aclame:pro 357 ELGKQKSTDPNMDRYQSSL---NYVFLDKKEEYQDKVGIK--------------------GKGGEVNAEEDK-----S 406 (406) Q Consensus 357 ~~g~~p~~~~~gd~~~~~~---n~~~~~~~~~~~~~~~~~--------------------~~gg~~~~~~~~-----~ 406 (406) ++|+||+ ||||++++.. +++......+...+.... .++|.++.+... | T Consensus 449 ~~gl~pi--egGD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~q~~~~~~~~~~~g~~~~~~~~~~~~~~ 524 (535) T protein:vir:10 449 DHGLKTV--DGLDVPGFIGSAENFINATGFGQPNVPDSSDDSGSTLGERERQERIQHSKDYEKGKDDPKSPLPKPSES 524 (535) T ss_pred HhCCCCC--CCccccccccchhhcccccccccccCCCCCCCccccCCccccCcccccccccccCCCCCCCCCCcCCCC Confidence 9999999 6799766433 222111111100000000 001111100000 0 No 76 >protein:vir:80644 Length: 551 # NCBI annotation: gp23 # Family: family:all:2446 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468463;genbank:gi:157325038;genbank:GeneID:5601615 Probab=100.00 E-value=8.3e-74 Score=421.25 Aligned_cols=401 Identities=11% Similarity=0.029 Sum_probs=288.3 Q ss_pred Cccc---------ccccC-CCCcchhhHH---HhhcCCcc--cccch-------hhhhccHHHHHHHHHHHHhhccc--- Q lcl|Aclame:pro 1 MSFF---------QPLGT-SKVSYDDYIS---SVLAGDVS--QKYLG-------VSALKNSDILTATSIIAGDIARF--- 55 (406) Q Consensus 1 M~~f---------~~~~~-~~~~~~~~~~---~~~~~~~~--~~~~~-------~~a~~~~~v~~~i~~ia~~ia~~--- 55 (406) -.++ ++.+. +......... .+-.+... ..... ..+..+|+|++||+.||+.||++ T Consensus 31 ~~~~~~~~~~~~~~k~~~~~~~a~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~~~~~~~npiv~~~I~~ia~~IA~~~~~ 110 (551) T protein:vir:80 31 YSIAIQQREQEQISKAMNNKEVAYSQPVIGSMSANPGFKTKPSIRNNQDLHGVLKKFGGNIILNAIINTRSNQVSMYCKP 110 (551) T ss_pred eeeecccccHHHHHHhhccCcceeecccccceecCcccccCccccChhHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhhh Confidence 1111 11100 1111111110 00000000 11111 12346799999999999999984 Q ss_pred --------eeEEEecCCccc-------ccchHHHHhhhhcccc-----CCHHHHHHHHHHHHHhcCCceEEEEecCCCce Q lcl|Aclame:pro 56 --------PLVKKDVNGDII-------HDEDINYLLNVKSTSN-----ASARTWKFAMAVNAILTGNSFSRILRDPKTNQ 115 (406) Q Consensus 56 --------~~~~~~~~~~~~-------~~~~~~~lL~~~Pn~~-----~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~ 115 (406) +|.+.-.+.... ..+.+..+| .+||+. +|+.+|++.++.+++++||+|++++++ ..|+ T Consensus 111 ~~~~~~g~~~~i~~kd~~~~~~~~~~~~~~~i~~~l-~~pn~~~~p~~~s~~~f~~~lv~dlll~Gnay~~i~rd-~~G~ 188 (551) T protein:vir:80 111 ARHSEKGVGFEVRLKDLDKKPTSHDEATIKRIESFI-EKTGVDNDINRDSFSSFVKKIVRDTYMYDQVNFEKVFN-RNQS 188 (551) T ss_pred hhhhcCCCCceEEecccCcccChhHHHHHHHHHHHH-HhcCCCCCCccchHHHHHHHHHHHHHhcCCEEEEEEEC-CCCc Confidence 444432222111 112334445 589987 488999999999999999999999998 4589 Q ss_pred eEEEeecCCeeEEEEEccCcce----EEEEEeecCCeEEEEcceeeEeeccCCC----CCccccCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 116 ALQFQFYRPSETTVEETDNHEI----VYTFTDMLTAKQVKCFAHDVIHWKFFSH----DTILGRSPLLSLGDEIDLQTGG 187 (406) Q Consensus 116 ~~~l~~l~p~~~~~~~~~~g~~----~~~~~~~~~g~~~~~~~~~vih~r~~~~----~~~~G~s~~~~~~~~i~~~~~~ 187 (406) |++||||+|..|++..+.+|.. .+++....++..+.|++++|||+|+++. .+.+|+||+.+++.+|..+.++ T Consensus 189 ~~~L~~l~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~eiiH~~~n~~~~~~~~~~G~spi~~a~~~i~~~~a~ 268 (551) T protein:vir:80 189 MVRFVAKDPTTIFFATTADGKIPDNGNRFVQVIDQKIVATFNAREMAFAVRNPRSDIYATGYGYPELEIALKQFIAHENT 268 (551) T ss_pred EEEEEEeCCceeEEEECCccccccCceEEEEEeCCcEEEEEcccceEEecccCCCCcccccccccHHHHHHHHHHHHHHH Confidence 9999999999999998888753 2344444555677899999999997653 2578999999999999999999 Q ss_pred HHHHHHHHhcCCCcceEEeecC--CCCHHHHHHHHHHHHHHhcc-cccCceeec-cCCceeeeccCChhHHHHHHHHHHH Q lcl|Aclame:pro 188 INTLIKFFKDGFSSGILTMKGA--QLSGDARQRARQEFEKMREG-SVGGSPLVF-DSTMEYTPLEIDTNVLQLITSNNFS 263 (406) Q Consensus 188 ~~~~~~~~~ng~~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~g-~~~~~~~vl-~~g~~~~~l~~~~~d~~~~e~~~~~ 263 (406) .+++.++|+||++|++++..+. .+++++++++++.|++.++| .++|+++++ ++|++|+++++++.|+||+|+++++ T Consensus 269 ~~~~~~~f~Ng~~p~giL~~~~~~~lt~e~~~~lk~~~~~~~~G~~nag~~~vl~~~g~~~~~l~~~~~D~qfle~~~~~ 348 (551) T protein:vir:80 269 EAFNDRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVVSAEDVKFVNMTPSARDMEFEKWLNYL 348 (551) T ss_pred HHHHHHHHHcCCCcceEEEEcCCCCCCHHHHHHHHHHHHHHhcCccccCccccccCCCceEEEccCChhHHHHHHHHHHH Confidence 9999999999999999998754 48999999999999999988 578887555 6899999999999999999999999 Q ss_pred HHHHHHHhcCCHHHhccc------------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhccc- Q lcl|Aclame:pro 264 TAQIAKALRVPSYKLGVN------------SPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTR- 330 (406) Q Consensus 264 ~~~Ia~~fgvpp~~lg~~------------~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~- 330 (406) +++||++|||||.+||.. .+++|++++...|++.||.||+++||++|+++|++..+ ..++++|+.. T Consensus 349 ~~~Ia~aFgVPp~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~-~~~~f~f~~~~ 427 (551) T protein:vir:80 349 INVISALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGFIEDFINKHIVAEFG-DKYTFQFVGGD 427 (551) T ss_pred HHHHHHHhcCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccC-CceEEEeeccC Confidence 999999999999999852 25689999999999999999999999999999987654 3456666532 Q ss_pred -chhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcccccccc---------------Cc-- Q lcl|Aclame:pro 331 -SVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKV---------------GI-- 392 (406) Q Consensus 331 -~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~---------------~~-- 392 (406) .+...++ .+..++.+|+||+||+|+++|+||. .|+||+++.|.++++++.....+... ++ T Consensus 428 ~~~~~~~~-~~~~~~~~g~lT~NE~R~~~gl~P~-~egGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (551) T protein:vir:80 428 IKSELESV-KILAEKAKVAMTVNEVRKELNLPGD-VIGGDIPLNGVIVQRIGQLMQQEQFEHEKQQSNLQMLQEQTGNRV 505 (551) T ss_pred hhhHHHHH-HHHHHHhcCCcCHHHHHHHhCCCCC-CCCCceeecccccccccccccccCcchhhhhhccccccCcCCCCC Confidence 1222333 3456777899999999999999983 27899999999988765433211000 00 Q ss_pred ----ccC--CCccCCCCCCC Q lcl|Aclame:pro 393 ----KGK--GGEVNAEEDKS 406 (406) Q Consensus 393 ----~~~--gg~~~~~~~~~ 406 (406) +.+ +.+.+++.+++ T Consensus 506 ~~~~~~~p~~~~~~~~~~~~ 525 (551) T protein:vir:80 506 STDVEDIPDGKDTTGDIGKD 525 (551) T ss_pred CCCCCCCCCccccCCCcccc Confidence 000 00000000000 No 77 >protein:vir:96579 Length: 576 # NCBI annotation: ORF012 # Family: family:all:2446 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238542;genbank:gi:66391267;genbank:GeneID:5130361 Probab=100.00 E-value=1.2e-73 Score=420.40 Aligned_cols=402 Identities=10% Similarity=0.056 Sum_probs=292.2 Q ss_pred Ccccccc-------c----CCCCcchhhHHHhhcCCcccccch-------------hhhhccHHHHHHHHHHHHhhccc- Q lcl|Aclame:pro 1 MSFFQPL-------G----TSKVSYDDYISSVLAGDVSQKYLG-------------VSALKNSDILTATSIIAGDIARF- 55 (406) Q Consensus 1 M~~f~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~~-------------~~a~~~~~v~~~i~~ia~~ia~~- 55 (406) =++|... . +...+..+.+...+.+..+....+ .....+|.|++||++||+.||++ T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~npiv~~~I~~ia~~vA~~~ 111 (576) T protein:vir:96 32 QANIRNIEEKSKELNKSLYGKQQAYAEPFLEVMDTNPEFRTKRSYMKNSDNLHDVLKQFGNNPILNAIILTRSNQVAMYC 111 (576) T ss_pred hHHHHHhhhhhhhhccccCCccchhhcceeeeeecCCCccccCcchhhhhhhHHHHHHhhcCHHHHHHHHHHHHHHHhhh Confidence 1122211 0 111222222222233322221111 11225788999999999999973 Q ss_pred ------------eeEEEecCCccc-----ccchHHHHh---hhhcccc-CCHHHHHHHHHHHHHhcCCceEEEEecCC-C Q lcl|Aclame:pro 56 ------------PLVKKDVNGDII-----HDEDINYLL---NVKSTSN-ASARTWKFAMAVNAILTGNSFSRILRDPK-T 113 (406) Q Consensus 56 ------------~~~~~~~~~~~~-----~~~~~~~lL---~~~Pn~~-~~~~~f~~~~~~~~~l~G~~~~~i~~~~~-~ 113 (406) ++.+++.+.... ..+.+...| +..|||. +|+++||+.++.+++++||+|++++++.. . T Consensus 112 ~~~~~~~~~~~~~i~lk~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~dlll~Gna~~~i~~~rd~~ 191 (576) T protein:vir:96 112 QPSRYNERGLGFEVRMRDLDAEPGKKEKEEIKRIENFILNTGRDKDIDRDSFQSFCRKIVRDTYTYDQVNFEKVFNKKNA 191 (576) T ss_pred hhhhhccccccceeEEecCcCccchhhhHhhhhHHhhHhhccCCCCCccccHHHHHHHHHHHHHhcCCeEEEEEEecCCC Confidence 344444432211 112222222 2456665 58899999999999999999999987543 4 Q ss_pred ceeEEEeecCCeeEEEEEccCcceEEE----EEeecCCeEEEEcceeeEeeccC-CCC---CccccCHHHHHHHHHHHHH Q lcl|Aclame:pro 114 NQALQFQFYRPSETTVEETDNHEIVYT----FTDMLTAKQVKCFAHDVIHWKFF-SHD---TILGRSPLLSLGDEIDLQT 185 (406) Q Consensus 114 g~~~~l~~l~p~~~~~~~~~~g~~~~~----~~~~~~g~~~~~~~~~vih~r~~-~~~---~~~G~s~~~~~~~~i~~~~ 185 (406) |++++|+|++|..|++..+.+|.+++. +....++....+++++|||++.+ ..+ +.+|+||+.++..+|..+. T Consensus 192 g~~~~L~pl~p~~V~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~ 271 (576) T protein:vir:96 192 TTMDKFIAVDPSTIFYATDKNGKIIKGGKRFVQVINKKVVASFTSREMAMGIRNPRTELSSSGYGLSEVEIAMKQFIAYN 271 (576) T ss_pred CceEEEEEeCCceeEEEECCCCceeeeeeEEEEecCCceEEEecccceEEEeecCCCCcccCcccccHHHHHHHHHHHHH Confidence 789999999999999999998866432 33445556778999999877654 333 6789999999999999999 Q ss_pred HHHHHHHHHHhcCCCcceEEeecC--CCCHHHHHHHHHHHHHHhcc-cccCc-eeeccCCceeeeccCChhHHHHHHHHH Q lcl|Aclame:pro 186 GGINTLIKFFKDGFSSGILTMKGA--QLSGDARQRARQEFEKMREG-SVGGS-PLVFDSTMEYTPLEIDTNVLQLITSNN 261 (406) Q Consensus 186 ~~~~~~~~~~~ng~~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~g-~~~~~-~~vl~~g~~~~~l~~~~~d~~~~e~~~ 261 (406) ++.+++.++|+||+.|++++..+. .+++++++++++.|++.++| .++|+ ++|+++|++|+++++++.|+||+|+++ T Consensus 272 ~~~~~~~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lr~~~~~~~~G~~nag~~p~vl~~G~~~~~ls~~~~d~qfle~~~ 351 (576) T protein:vir:96 272 NTETFNDRFFSHGGTTRGILQIKSEQQQSQRALENFKREWKSSFSGINGSWQVPVVMADDIKFVNMTPTANDMQFEKWLT 351 (576) T ss_pred HHHHHHHHHHhccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceeecCCCceEEeccCChhhHHHHHHHH Confidence 999999999999999999998764 57999999999999999998 57777 589999999999999999999999999 Q ss_pred HHHHHHHHHhcCCHHHhcccc-------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhc Q lcl|Aclame:pro 262 FSTAQIAKALRVPSYKLGVNS-------------PNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFD 328 (406) Q Consensus 262 ~~~~~Ia~~fgvpp~~lg~~~-------------~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~ 328 (406) +++++||++|||||.+||... +++|++++.+.|++.||.||++.||++|+++|++..+ ..++++|+ T Consensus 352 ~~~~~Ia~afgVPp~~lG~~~~~~~~g~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~-~~~~~~f~ 430 (576) T protein:vir:96 352 YLINIISALYGIDPAEIGFPNRGGATGGKGGNTLNEADPGKKQQQSQNKGLQPLLRFIEDLINTHIISEYS-DKYVFQFV 430 (576) T ss_pred HhHHHHHHHhCCCHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcc-CceEEEec Confidence 999999999999999998632 5789999999999999999999999999999997654 33455654 Q ss_pred ccchhHHHHHHHH--HHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcccccc-----cc------CcccC Q lcl|Aclame:pro 329 TRSVTGRNVDEIV--KLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQD-----KV------GIKGK 395 (406) Q Consensus 329 ~~~~~~~~~~~~~--~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~-----~~------~~~~~ 395 (406) +.+.+.+++.+. ..+.+|+||+||+|+++|+||+ |+||+++.|.++.+++....... .. ....+ T Consensus 431 -r~d~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~pi--egGD~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 507 (576) T protein:vir:96 431 -GGDTKSELDKIKILQEEVKTYKTVNEARKEKGLKPI--EGGDVLLDGSFIQSMSLNTQKEQYEDTKQKERFDMIQQFLN 507 (576) T ss_pred -cCCHHHHHHHHHHHHHHhcCccCHHHHHHHhCCCCC--CCcceeccccccccccccccCCCCCCccccccccccccccC Confidence 456666666554 3466799999999999999999 67999999999987764321100 00 00112 Q ss_pred CCccCCCCCCC Q lcl|Aclame:pro 396 GGEVNAEEDKS 406 (406) Q Consensus 396 gg~~~~~~~~~ 406 (406) +++.+..+.++ T Consensus 508 ~~~~~~~~~~s 518 (576) T protein:vir:96 508 SPDDEEPQQES 518 (576) T ss_pred CCCCCCCCCCC Confidence 22211111111 No 78 >protein:vir:4995 Length: 384 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049969;genbank:gi:9632941;genbank:GeneID:1262104 Probab=100.00 E-value=7.4e-74 Score=421.50 Aligned_cols=359 Identities=19% Similarity=0.254 Sum_probs=293.4 Q ss_pred CcccccccCC-CCc--chhhHHH-----hhc-CCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccch Q lcl|Aclame:pro 1 MSFFQPLGTS-KVS--YDDYISS-----VLA-GDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDED 71 (406) Q Consensus 1 M~~f~~~~~~-~~~--~~~~~~~-----~~~-~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 71 (406) ||||+++... ..+ ...++.. +++ ...+.+++..+|+++++|++||++||++||++|+++++... T Consensus 1 Mglf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~V~~~i~~Ia~~ia~l~~~~~~~~~------- 73 (384) T protein:vir:49 1 MPIFNITNLATESPPSNQDSFFDITDPEFLDALNGSEWVSAETALKNSDLFSIISQLSNDLATAKITTSRKQL------- 73 (384) T ss_pred CccccccccCcccccccchhhccccchhhcccccCCceechhhhhccHHHHHHHHHHHHHHhhCceeeecchh------- Confidence 9999875332 211 1111111 111 12345688899999999999999999999999999986532 Q ss_pred HHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCc-ceEEEEEee--cCCe Q lcl|Aclame:pro 72 INYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNH-EIVYTFTDM--LTAK 148 (406) Q Consensus 72 ~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g-~~~~~~~~~--~~g~ 148 (406) ..|+.+||++||+++||+.++.+++++||+|++++++ ..|++.+|+|++|+.+++..+.++ .++|.+... ..+. T Consensus 74 --~~l~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~-~~g~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~~~~~~ 150 (384) T protein:vir:49 74 --QGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRN-ENGRDMKWEYLRPSQVSFNRLDNQNGLYYNITFDDPRIPP 150 (384) T ss_pred --hhhhhccCCCCCHHHHHHHHHHHhhhcCCeEEEEEEC-CCCcEEEEEEEcCceeEEEEcCCCceEEEEEEecCccccc Confidence 2466899999999999999999999999999999998 458999999999999999876654 455555433 3456 Q ss_pred EEEEcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHh Q lcl|Aclame:pro 149 QVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMR 227 (406) Q Consensus 149 ~~~~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 227 (406) .+.+++++|||+|+++.++ ++|+||+.++..++..+.++.++..++|+||+.|+++++.++..++++.++. ...... T Consensus 151 ~~~~~~~eVih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~--~~~~~~ 228 (384) T protein:vir:49 151 KQHVPQGDILHFRLLSVDGGLTSVSPLMALGRELNIQKASDKLTLNALKNALNANGILKIKGGGLLDFKTKQ--SRSRQA 228 (384) T ss_pred eeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCChHHHHHH--HHHHHh Confidence 7889999999999876665 8999999999999999999999999999999999999999998887765543 223333 Q ss_pred cccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc----ccchhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 228 EGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN----SPNQSVAQLMEDYVTNDLPFYF 303 (406) Q Consensus 228 ~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~----~~~~n~~~~~~~~~~~~i~P~~ 303 (406) .+.++|+++++++|++|+++++++.|+|++|.+++++++||++|||||++||.. .++++.+++...|++.+|.|++ T Consensus 229 ~~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~~~~~~~~~~~i~~~l~pi~ 308 (384) T protein:vir:49 229 MKQMQGGPLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESVVGGEGDKQSSLEMIYNIYFKAVSRFLRPFV 308 (384) T ss_pred cccCCccceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHH Confidence 457889999999999999999999999999999999999999999999999863 3456778888999999999999 Q ss_pred HHHHHHHHhhccCcc----chhhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeee Q lcl|Aclame:pro 304 DAITSELGLKTLNDK----DRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQ 372 (406) Q Consensus 304 ~~ie~~l~~~l~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~ 372 (406) ..|+++|++++.... .....+++|++ +.+..++.+++..+.+.|+++ ||+|+.+|++|++|++.+..| T Consensus 309 ~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~e~~~~l~~~g~~~-ne~r~~~~~~p~~gGd~~~~~ 384 (384) T protein:vir:49 309 SELSKKLSCEVDADILPAVDPTGSNYIGLINSMVKTGTLAQNQGLYVLQQAEILP-KDLPEGETDSTLKGGETNEQY 384 (384) T ss_pred HHHHHHhchhhhhhhhhhhhccchHHHHHHHHHhhcCcccHHHHHHHHhhCCCCC-hhHHHHcCCCCCCCCCCCCCC Confidence 999999999874321 12234555554 456778889999999999986 999999999999888777777 No 79 >protein:vir:63755 Length: 547 # NCBI annotation: gp14 # Family: family:all:2446 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547619;genbank:GeneID:3783506 Probab=100.00 E-value=1.4e-72 Score=414.45 Aligned_cols=401 Identities=11% Similarity=0.037 Sum_probs=288.6 Q ss_pred Cc-----cccccc-CCCCcchhhHHHhh---cCCcc--cccch-------hhhhccHHHHHHHHHHHHhhccc------- Q lcl|Aclame:pro 1 MS-----FFQPLG-TSKVSYDDYISSVL---AGDVS--QKYLG-------VSALKNSDILTATSIIAGDIARF------- 55 (406) Q Consensus 1 M~-----~f~~~~-~~~~~~~~~~~~~~---~~~~~--~~~~~-------~~a~~~~~v~~~i~~ia~~ia~~------- 55 (406) |. -..+-+ ....+......... .+... ..... ..+..+|.|++||+.||+.||.+ T Consensus 31 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~npiv~~~I~~~a~~ia~~~~~~~~~ 110 (547) T protein:vir:63 31 IQQREQEQISKAMNNKEVAYSQPVIGSMSANPGFKTKPSIRNNQDLHGVLKKFGGNIILNAIINTRSNQVSMYCKPARHS 110 (547) T ss_pred hhhhhHHHHHHhhcccchhhhchhhheeecccccccCCccCChhHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhhhhhhh Confidence 11 111110 11111111111111 11010 01111 12346899999999999999974 Q ss_pred ------eeEEEecCCccc-----ccchHHHHhhhhccccC-----CHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEE Q lcl|Aclame:pro 56 ------PLVKKDVNGDII-----HDEDINYLLNVKSTSNA-----SARTWKFAMAVNAILTGNSFSRILRDPKTNQALQF 119 (406) Q Consensus 56 ------~~~~~~~~~~~~-----~~~~~~~lL~~~Pn~~~-----~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l 119 (406) .+.++..+++.. ..+.+..+|+ +||+++ |+++||+.++.+++++||+|++++++ ..|+|++| T Consensus 111 ~~~~~~~ir~k~~~~~~~~~~~~~~~~l~~~l~-~pn~~~~p~~~s~~~f~~~lv~d~ll~Gn~~~~i~rd-~~G~~~~L 188 (547) T protein:vir:63 111 EKGVGFEVRLKDLDKKPTSHDEATIKRIESFIE-KTGVDNDINRDSFSSFVKKIVRDTYMYDQVNFEKVFN-RNQSMVRF 188 (547) T ss_pred ccCCCceeEecccccccChhhHHHHHHHHHHHH-hhCCCCCCccchHHHHHHHHHHHHHhhCCEEEEEEEC-CCCcEEEE Confidence 233333222211 1234555554 788874 88999999999999999999999998 55899999 Q ss_pred eecCCeeEEEEEccCcce----EEEEEeecCCeEEEEcceeeEeeccCCCC----CccccCHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 120 QFYRPSETTVEETDNHEI----VYTFTDMLTAKQVKCFAHDVIHWKFFSHD----TILGRSPLLSLGDEIDLQTGGINTL 191 (406) Q Consensus 120 ~~l~p~~~~~~~~~~g~~----~~~~~~~~~g~~~~~~~~~vih~r~~~~~----~~~G~s~~~~~~~~i~~~~~~~~~~ 191 (406) |||+|..|++..+.+|.. .+++....++..+.|++++|||+|+++.. +.||+||+.++..+|..+.++.+++ T Consensus 189 ~~l~p~~V~~~~~~~g~~~~~~~~y~~~~~~~~~~~~~~~eiih~r~n~~~~~~~~~~G~Spi~~~~~~i~~~~~a~~~~ 268 (547) T protein:vir:63 189 VAKDPTTIFFATTADGKIPDNGNRFVQVIDQKIVATFNAREMAFAVRNPRSDIYATGYGYPELEIALKQFIAHENTEAFN 268 (547) T ss_pred EEecCceeEEEECCccccccCceEEEEEcCCcEEEEeccccEEEecccCCCCcccccccccHHHHHHHHHHHHHHHHHHH Confidence 999999999998877743 23344455566778999999999976543 5689999999999999999999999 Q ss_pred HHHHhcCCCcceEEeecC--CCCHHHHHHHHHHHHHHhcc-cccCceeec-cCCceeeeccCChhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 192 IKFFKDGFSSGILTMKGA--QLSGDARQRARQEFEKMREG-SVGGSPLVF-DSTMEYTPLEIDTNVLQLITSNNFSTAQI 267 (406) Q Consensus 192 ~~~~~ng~~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~g-~~~~~~~vl-~~g~~~~~l~~~~~d~~~~e~~~~~~~~I 267 (406) .++|+||++|++++..+. .+++++++++++.|++.++| .|+|+++++ ++|++|+++++++.|+||+|++++++++| T Consensus 269 ~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lk~~~~~~~~G~~nagk~~vl~~~g~~~~~l~~~~~d~qfle~~~~~~~~I 348 (547) T protein:vir:63 269 DRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVVSAEDVKFVNMTPSARDMEFEKWLNYLINVI 348 (547) T ss_pred HHHHHcCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEcCCChhHHHHHHHHHHHHHHH Confidence 999999999999997654 48999999999999999988 578887554 68999999999999999999999999999 Q ss_pred HHHhcCCHHHhccc------------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhccc--chh Q lcl|Aclame:pro 268 AKALRVPSYKLGVN------------SPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTR--SVT 333 (406) Q Consensus 268 a~~fgvpp~~lg~~------------~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~--~~~ 333 (406) |++|||||++||.. .+++|++++.+.|++.||.|+++.||++||++|++..+ ..++++|+.. .+. T Consensus 349 a~afgVPP~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~~~~~tL~P~~~~ie~~ln~~L~~~~~-~~~~~~f~~~~~~~~ 427 (547) T protein:vir:63 349 SALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGFIEDFINKHIVAEFG-DKYTFQFVGGDIKSE 427 (547) T ss_pred HHHhCCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC-CceEEEeeccccccH Confidence 99999999999852 25789999999999999999999999999999987544 3455666532 222 Q ss_pred HHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcccccccc----------CcccCCCcc---- Q lcl|Aclame:pro 334 GRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKV----------GIKGKGGEV---- 399 (406) Q Consensus 334 ~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~----------~~~~~gg~~---- 399 (406) ..++ .+..++.+|+||+||+|+++|+||. .|+||+++.|.++.+++.....+... ..+..++++ T Consensus 428 ~~~~-~~~~~~~~g~lT~NE~R~~~gl~P~-~egGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (547) T protein:vir:63 428 LESV-KILAEKAKVAMTVNEVRKELNLPGD-VIGGDIPLNGVIVQRIGQLMQQEQFEHEKQQSNLQMLQEQTGNRVSTDV 505 (547) T ss_pred HHHH-HHHHHHhCCCcCHHHHHHHhCCCCC-CCCCceeecccccccccccccccCCccccchhhccccccccCCCCCCCC Confidence 2333 3456778899999999999999983 27899999999988876432211000 000001110 Q ss_pred CCCCCCC Q lcl|Aclame:pro 400 NAEEDKS 406 (406) Q Consensus 400 ~~~~~~~ 406 (406) +.+.+.+ T Consensus 506 ~~~~~~~ 512 (547) T protein:vir:63 506 EDIPDGK 512 (547) T ss_pred CCCCCCc Confidence 0000000 No 80 >protein:vir:858 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:18 # MgeName: bIL170 # Cross-refs: genbank:acc:NP_047117;genbank:gi:9630570;genbank:GeneID:1261758 Probab=100.00 E-value=1.4e-73 Score=420.04 Aligned_cols=351 Identities=17% Similarity=0.123 Sum_probs=266.1 Q ss_pred CcccccccCCC---CcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc--------cccc Q lcl|Aclame:pro 1 MSFFQPLGTSK---VSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD--------IIHD 69 (406) Q Consensus 1 M~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~--------~~~~ 69 (406) ||||++..+.. ...+. ...........++..++|++||++||++||++|+++++.+++ .... T Consensus 1 M~~f~k~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~~~~~~~~~~~~ 73 (378) T protein:vir:85 1 MNLFGKVVSFSRGKLNNDT-------QRVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGSDTLISMAG 73 (378) T ss_pred CchhhhhhhhhhcccccCC-------cceeeeeccchhhhhHHHHHHHHHHHHhHhhCceeEEEEecccccccccccccc Confidence 99998753211 10000 001112333456888999999999999999999999876432 3467 Q ss_pred chHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeE Q lcl|Aclame:pro 70 EDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQ 149 (406) Q Consensus 70 ~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~ 149 (406) |++++||+.+||++||+++||+.++.+++++||||++++.+..+|.+...++. .+ . T Consensus 74 ~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~~----------------------~~--~ 129 (378) T protein:vir:85 74 SDLDEVLNWSYKGEHNSMEFWQKVIKKLLCTRYVDLYPIFDSETGELLDLLFA----------------------ND--K 129 (378) T ss_pred chHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEeecCCCceEEEEEec----------------------CC--C Confidence 99999999999999999999999999999999999987665555544433321 12 2 Q ss_pred EEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHh- Q lcl|Aclame:pro 150 VKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMR- 227 (406) Q Consensus 150 ~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~- 227 (406) +.+.+++|+|++.+ +.++ +.+.+..+... ....+++| .++++++.+..+++++.++++++|++.+ T Consensus 130 ~~~~~~dvih~~~~~~~~~--~~~~~~~a~~~----------~~~~~~~~-~~~g~l~~~~~l~~~~~~~~~~~~~~~~~ 196 (378) T protein:vir:85 130 KEYKPEELVRLVSPFYINE--DTSILDNALAS----------IQTKLEQG-KLRGLLKINAFLDIDNTQEYREKALATIK 196 (378) T ss_pred EEEcccceEEEecCcCccc--hhhHHHHHHHH----------HHHHHhcC-CcceEEEeCCcCCHHHHHHHHHHHHHHHH Confidence 35678899999842 2222 23344333332 23334454 6778899899999888777777776654 Q ss_pred ---cccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 228 ---EGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFD 304 (406) Q Consensus 228 ---~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~ 304 (406) ++.+++++++|++|++|+++++++.++++ +.+++.+++||++|||||.+|+ +++.+++..+|+++||.||++ T Consensus 197 ~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~----~s~~e~~~~~f~~~tL~P~~~ 271 (378) T protein:vir:85 197 NMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIELIKSELLTGYFMNENILL----GTATQEQQIYFYNSTIIPLLI 271 (378) T ss_pred HhhcccccccceecCCCceEEeccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhc----CCchHHHHHHHHHHHHHHHHH Confidence 55678899999999999999999999996 6778999999999999999994 345678899999999999999 Q ss_pred HHHHHHHhhccCccchhh-------hhhhhc----ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeee Q lcl|Aclame:pro 305 AITSELGLKTLNDKDRRL-------YHIEFD----TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQS 373 (406) Q Consensus 305 ~ie~~l~~~l~~~~~~~~-------~~~~~~----~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~ 373 (406) +||++|+++||++.++.. ..++|+ .+.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++ T Consensus 272 ~ie~~l~~kLl~~~er~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~lgl~p~--~gGD~~~~ 349 (378) T protein:vir:85 272 QLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGEQPI--EGGDIYIA 349 (378) T ss_pred HHHHHHHhhcCChhhhhhhhhccccceeeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCeEee Confidence 999999999999876532 124444 35678899999999999999999999999999999 56999999 Q ss_pred ccCccchhhccccccccCcccCCCccCCC Q lcl|Aclame:pro 374 SLNYVFLDKKEEYQDKVGIKGKGGEVNAE 402 (406) Q Consensus 374 ~~n~~~~~~~~~~~~~~~~~~~gg~~~~~ 402 (406) |+|++|++.....+...++..+++++|++ T Consensus 350 ~~N~~~~~~~~~~~~~~~~~~~~~e~~n~ 378 (378) T protein:vir:85 350 NLNAVAVKNLSDLQGSRKDVASTDETNNQ 378 (378) T ss_pred cccccccccchhhcCccCCCCCCCCCCCC Confidence 99999999877655544443333333333 No 81 >protein:vir:94869 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1532 # MgeName: P008 # Cross-refs: genbank:acc:YP_762515;genbank:gi:115304214;genbank:GeneID:5141182 Probab=100.00 E-value=2.3e-73 Score=418.77 Aligned_cols=354 Identities=17% Similarity=0.114 Sum_probs=269.4 Q ss_pred CcccccccCCCCcchhhHHHhhc-CCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCc--------ccccch Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLA-GDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD--------IIHDED 71 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~--------~~~~~~ 71 (406) ||+|+++.+-... ....+ ......+....++..++|++||++||++||++|+++++.++. ....|+ T Consensus 1 M~if~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~Ia~~iA~lp~~~~~~~~~~~~~~~~~~~~~~~ 75 (378) T protein:vir:94 1 MNLFGKVVSFSRG-----KLNNDTQRVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGSDTLISMAGSD 75 (378) T ss_pred CchhHHhHhhhhc-----ccccCcceeeeeecchhhhhhHHHHHHHHHHHHhHhhCceeeeeecccccccccccccccch Confidence 9999876431110 00000 111122334456788899999999999999999998875432 346799 Q ss_pred HHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEE Q lcl|Aclame:pro 72 INYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVK 151 (406) Q Consensus 72 ~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~ 151 (406) +.+||+.+||++||+++||+.++.+++++||+|++++.+..+|.+..+++. .++ .+ T Consensus 76 l~~lLn~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~~----------------------~~~--~~ 131 (378) T protein:vir:94 76 LDEVLNWSSKGERNSMEFWQKVIKKLLTTRYIDLYPIFDSETGELLDLLFA----------------------NDK--KE 131 (378) T ss_pred HHHHHhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCCcEEEEEEe----------------------cCc--EE Confidence 999999999999999999999999999999999987665555655443332 122 45 Q ss_pred EcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHH----HHHh Q lcl|Aclame:pro 152 CFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEF----EKMR 227 (406) Q Consensus 152 ~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~----~~~~ 227 (406) +++++|+|+|.+... ..+.+++..+...+. ..++++ .++++++.+..+++++.++.+++| ++.+ T Consensus 132 ~~~~dvih~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~-~~~g~l~~~~~l~~~~~~~~~e~~~~~~~~~~ 199 (378) T protein:vir:94 132 YKPEELVRLTSPFYI-NEDTSILDNALASIQ----------TKLEQG-KLRGLLKINAFLDIDNTQEYREKALATIKNMQ 199 (378) T ss_pred echhceeeecCcCCc-ccchhHHHHHHHHHH----------HHHhhC-CcccceeeCCcCCHHHHHHHHHHHHHHHHHhh Confidence 789999999954321 124566665554433 233444 466788888888877655555544 5555 Q ss_pred cccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 228 EGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAIT 307 (406) Q Consensus 228 ~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie 307 (406) +|.+++++++|++|++|+++++++.++++ +.+++++++||++|||||.+|+. .+.+++..+|+++||.||+++|| T Consensus 200 ~~~n~~~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgvPp~~l~g----~~~e~~~~~f~~~tl~P~~~~ie 274 (378) T protein:vir:94 200 EGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG----TATQEQQIYFYNSTIIPLLIQLE 274 (378) T ss_pred cccccccceeccCCceEEEccCChHHhhH-HHHHHHHHHHHHHhCCCHHHhcC----CchHHHHHHHHHHHHHHHHHHHH Confidence 67788899999999999999999999996 77789999999999999999953 33378889999999999999999 Q ss_pred HHHHhhccCccchhh-------hhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccC Q lcl|Aclame:pro 308 SELGLKTLNDKDRRL-------YHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLN 376 (406) Q Consensus 308 ~~l~~~l~~~~~~~~-------~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n 376 (406) ++|+++||+..++.. ..+.|++ +.|.+++++.+.+++++|++|+||+|+++|+||+ |+||++++|+| T Consensus 275 ~~l~~~Ll~~~e~~~g~~~~~~~~~~f~~~~l~~~d~~~~~e~~~~~~~~G~~t~NE~R~~~g~~p~--~ggd~~~~~~n 352 (378) T protein:vir:94 275 KELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGEQPI--EGGDVYIANLN 352 (378) T ss_pred HHHHhhcCChhHhhhhhhhcccceeEeecchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCeeeeccc Confidence 999999999876532 1244543 5678899999999999999999999999999999 66999999999 Q ss_pred ccchhhccccccccCcccCCCccCCC Q lcl|Aclame:pro 377 YVFLDKKEEYQDKVGIKGKGGEVNAE 402 (406) Q Consensus 377 ~~~~~~~~~~~~~~~~~~~gg~~~~~ 402 (406) ++|++...+.+...++..+|+|+|++ T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~e~~n~ 378 (378) T protein:vir:94 353 AVAVKNLSDLQGNRKDVTSTDETNNQ 378 (378) T ss_pred ccchhcchhcccccCCCCCCCCCCCC Confidence 99999888776666555556665555 No 82 >protein:vir:95599 Length: 563 # NCBI annotation: ORF014 # Family: family:all:2446 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240900;genbank:gi:66394963;genbank:GeneID:5132540 Probab=100.00 E-value=8.3e-72 Score=410.28 Aligned_cols=402 Identities=11% Similarity=0.044 Sum_probs=293.6 Q ss_pred CcccccccC-CCCcchhhHHHhhcCCcccc---------cchh----hhhccHHHHHHHHHHHHhhcc------------ Q lcl|Aclame:pro 1 MSFFQPLGT-SKVSYDDYISSVLAGDVSQK---------YLGV----SALKNSDILTATSIIAGDIAR------------ 54 (406) Q Consensus 1 M~~f~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~----~a~~~~~v~~~i~~ia~~ia~------------ 54 (406) ++++.+... +.......+...+....+.. .+.. ....++.|.+||+.+++.||. T Consensus 43 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~n~i~~~~I~t~~~~vA~~~~~~~~~~~~~ 122 (563) T protein:vir:95 43 YQDLTKSLYGQQQAYAEPFIEMMDTNPEFRDKRSYMKNEHNLHDVLKKFGNNPILNAIILTRSNQVAMYCQPARYSEKGL 122 (563) T ss_pred HHHHHhhhccCCCcchhhhHhhhcccccccccccCCCCcccHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhhhhhcccc Confidence 556655332 22222333333322221111 1111 112467789999999998885 Q ss_pred -ceeEEEecCCcc-----cccchHHHHhh---hhcccc-CCHHHHHHHHHHHHHhcCCceEEEEec-CCCceeEEEeecC Q lcl|Aclame:pro 55 -FPLVKKDVNGDI-----IHDEDINYLLN---VKSTSN-ASARTWKFAMAVNAILTGNSFSRILRD-PKTNQALQFQFYR 123 (406) Q Consensus 55 -~~~~~~~~~~~~-----~~~~~~~~lL~---~~Pn~~-~~~~~f~~~~~~~~~l~G~~~~~i~~~-~~~g~~~~l~~l~ 123 (406) +++++++.+... ...+.+..+|. ..|||. +|+++||+.++.+++++||+|+++++. ...|+|++|||++ T Consensus 123 ~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~~lll~Gn~~~~~~~~rd~~G~~~~L~pl~ 202 (563) T protein:vir:95 123 GFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDVDRDSFQTFCKKIVRDTYIYDQVNFEKVFNKNNKTKLEKFIAVD 202 (563) T ss_pred cceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHhcCCeEEEEEEEecCCCceEEEEEeC Confidence 577777655332 22344544432 233443 588999999999999999999987632 2458999999999 Q ss_pred CeeEEEEEccCcceEE----EEEeecCCeEEEEcceeeEeec-cCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 124 PSETTVEETDNHEIVY----TFTDMLTAKQVKCFAHDVIHWK-FFSHD---TILGRSPLLSLGDEIDLQTGGINTLIKFF 195 (406) Q Consensus 124 p~~~~~~~~~~g~~~~----~~~~~~~g~~~~~~~~~vih~r-~~~~~---~~~G~s~~~~~~~~i~~~~~~~~~~~~~~ 195 (406) |+.|++..+.+|.+.+ +++...++....+++++|||++ +++.+ +.||+||+.++..+|..+.++.+++.++| T Consensus 203 p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~evI~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~~~~~~~~~f 282 (563) T protein:vir:95 203 PSTIFYATDKKGKIIKGGKRFVQVVDKRVVASFTSRELAMGIRNPRTELSSSGYGLSEVEIAMKEFIAYNNTESFNDRFF 282 (563) T ss_pred CceeEEEECCCCceeccceeEEEEeCCceeEEecCcceEEEeccCCCCcccCcccchHHHHHHHHHHHHHHHHHHHHHHH Confidence 9999999988876532 2333444556688999987655 44444 67899999999999999999999999999 Q ss_pred hcCCCcceEEeecC--CCCHHHHHHHHHHHHHHhcc-cccCce-eeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 196 KDGFSSGILTMKGA--QLSGDARQRARQEFEKMREG-SVGGSP-LVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKAL 271 (406) Q Consensus 196 ~ng~~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~g-~~~~~~-~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~f 271 (406) +||+.|+++++.+. .+++++++++++.|++.++| .++|++ +|+++|++|+++++++.|+||+|++++++++||++| T Consensus 283 ~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl~~G~~~~~l~~~~~d~qfle~~~~~~~~Ia~af 362 (563) T protein:vir:95 283 SHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGINGSWQIPVVMADDIKFVNMTPTANDMQFEKWLNYLINIISALY 362 (563) T ss_pred HccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceEEcCCCceEEeccCChhHHHHHHHHHHHHHHHHHHh Confidence 99999999998764 47999999999999999988 577775 789999999999999999999999999999999999 Q ss_pred cCCHHHhcccc-------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhHHHHH Q lcl|Aclame:pro 272 RVPSYKLGVNS-------------PNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVD 338 (406) Q Consensus 272 gvpp~~lg~~~-------------~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 338 (406) ||||.+||... +++|++++.+.|++.||.||++.||++|+++|++..+ ..+.++|+ +.+.+.+.+ T Consensus 363 gVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~~~tL~P~l~~ie~~ln~~L~~~~~-~~~~~~f~-r~D~~~~~e 440 (563) T protein:vir:95 363 GIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQNKGLQPLLRFIEDLVNRHIISEYG-DKYTFQFV-GGDTKSATD 440 (563) T ss_pred CCCHHHccccccccccccccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcc-cccEEEec-cCCHHHHHH Confidence 99999998532 3468899999999999999999999999999997654 34455553 556777766 Q ss_pred HH--HHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccc-------------------cCc-ccCC Q lcl|Aclame:pro 339 EI--VKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDK-------------------VGI-KGKG 396 (406) Q Consensus 339 ~~--~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~-------------------~~~-~~~g 396 (406) .+ ..++++|+||+||+|+++|+||+ ++||++++|.++++++........ ... +.++ T Consensus 441 ~~~~~~~~~~G~lT~NE~R~~~gl~Pi--~gGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (563) T protein:vir:95 441 KLNILKLETQIFKTVNEAREEQGKKPI--EGGDIILDASFLQGTAQLQQDKQYNDGKQKERLQMMMSLLEGDNDDSEEGQ 518 (563) T ss_pred HHHHHHHhcCCccCHHHHHHHhCCCCC--CCcceeecccccccccccccccCCCccccchhhhhcccccCCCCCCCCCCC Confidence 54 35688999999999999999999 679999999999887654321100 000 0000 Q ss_pred C-c---cCCCCCCC Q lcl|Aclame:pro 397 G-E---VNAEEDKS 406 (406) Q Consensus 397 g-~---~~~~~~~~ 406 (406) . + ++.+.++. T Consensus 519 ~~~~~~~~~~~~~~ 532 (563) T protein:vir:95 519 STDSSNDDKEIGTD 532 (563) T ss_pred CCCCCCCccccccc Confidence 0 0 11111111 No 83 >protein:vir:99312 Length: 563 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024471;genbank:gi:48696430;genbank:GeneID:2948040 Probab=100.00 E-value=8.3e-72 Score=410.28 Aligned_cols=402 Identities=11% Similarity=0.044 Sum_probs=293.6 Q ss_pred CcccccccC-CCCcchhhHHHhhcCCcccc---------cchh----hhhccHHHHHHHHHHHHhhcc------------ Q lcl|Aclame:pro 1 MSFFQPLGT-SKVSYDDYISSVLAGDVSQK---------YLGV----SALKNSDILTATSIIAGDIAR------------ 54 (406) Q Consensus 1 M~~f~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~----~a~~~~~v~~~i~~ia~~ia~------------ 54 (406) ++++.+... +.......+...+....+.. .+.. ....++.|.+||+.+++.||. T Consensus 43 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~n~i~~~~I~t~~~~vA~~~~~~~~~~~~~ 122 (563) T protein:vir:99 43 YQDLTKSLYGQQQAYAEPFIEMMDTNPEFRDKRSYMKNEHNLHDVLKKFGNNPILNAIILTRSNQVAMYCQPARYSEKGL 122 (563) T ss_pred HHHHHhhhccCCCcchhhhHhhhcccccccccccCCCCcccHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhhhhhcccc Confidence 556655332 22222333333322221111 1111 112467789999999998885 Q ss_pred -ceeEEEecCCcc-----cccchHHHHhh---hhcccc-CCHHHHHHHHHHHHHhcCCceEEEEec-CCCceeEEEeecC Q lcl|Aclame:pro 55 -FPLVKKDVNGDI-----IHDEDINYLLN---VKSTSN-ASARTWKFAMAVNAILTGNSFSRILRD-PKTNQALQFQFYR 123 (406) Q Consensus 55 -~~~~~~~~~~~~-----~~~~~~~~lL~---~~Pn~~-~~~~~f~~~~~~~~~l~G~~~~~i~~~-~~~g~~~~l~~l~ 123 (406) +++++++.+... ...+.+..+|. ..|||. +|+++||+.++.+++++||+|+++++. ...|+|++|||++ T Consensus 123 ~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~~lll~Gn~~~~~~~~rd~~G~~~~L~pl~ 202 (563) T protein:vir:99 123 GFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDVDRDSFQTFCKKIVRDTYIYDQVNFEKVFNKNNKTKLEKFIAVD 202 (563) T ss_pred cceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHhcCCeEEEEEEEecCCCceEEEEEeC Confidence 577777655332 22344544432 233443 588999999999999999999987632 2458999999999 Q ss_pred CeeEEEEEccCcceEE----EEEeecCCeEEEEcceeeEeec-cCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 124 PSETTVEETDNHEIVY----TFTDMLTAKQVKCFAHDVIHWK-FFSHD---TILGRSPLLSLGDEIDLQTGGINTLIKFF 195 (406) Q Consensus 124 p~~~~~~~~~~g~~~~----~~~~~~~g~~~~~~~~~vih~r-~~~~~---~~~G~s~~~~~~~~i~~~~~~~~~~~~~~ 195 (406) |+.|++..+.+|.+.+ +++...++....+++++|||++ +++.+ +.||+||+.++..+|..+.++.+++.++| T Consensus 203 p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~evI~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~~~~~~~~~f 282 (563) T protein:vir:99 203 PSTIFYATDKKGKIIKGGKRFVQVVDKRVVASFTSRELAMGIRNPRTELSSSGYGLSEVEIAMKEFIAYNNTESFNDRFF 282 (563) T ss_pred CceeEEEECCCCceeccceeEEEEeCCceeEEecCcceEEEeccCCCCcccCcccchHHHHHHHHHHHHHHHHHHHHHHH Confidence 9999999988876532 2333444556688999987655 44444 67899999999999999999999999999 Q ss_pred hcCCCcceEEeecC--CCCHHHHHHHHHHHHHHhcc-cccCce-eeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 196 KDGFSSGILTMKGA--QLSGDARQRARQEFEKMREG-SVGGSP-LVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKAL 271 (406) Q Consensus 196 ~ng~~~~~~~~~~~--~~~~e~~~~~~~~~~~~~~g-~~~~~~-~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~f 271 (406) +||+.|+++++.+. .+++++++++++.|++.++| .++|++ +|+++|++|+++++++.|+||+|++++++++||++| T Consensus 283 ~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl~~G~~~~~l~~~~~d~qfle~~~~~~~~Ia~af 362 (563) T protein:vir:99 283 SHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGINGSWQIPVVMADDIKFVNMTPTANDMQFEKWLNYLINIISALY 362 (563) T ss_pred HccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceEEcCCCceEEeccCChhHHHHHHHHHHHHHHHHHHh Confidence 99999999998764 47999999999999999988 577775 789999999999999999999999999999999999 Q ss_pred cCCHHHhcccc-------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhHHHHH Q lcl|Aclame:pro 272 RVPSYKLGVNS-------------PNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVD 338 (406) Q Consensus 272 gvpp~~lg~~~-------------~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 338 (406) ||||.+||... +++|++++.+.|++.||.||++.||++|+++|++..+ ..+.++|+ +.+.+.+.+ T Consensus 363 gVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~~~tL~P~l~~ie~~ln~~L~~~~~-~~~~~~f~-r~D~~~~~e 440 (563) T protein:vir:99 363 GIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQNKGLQPLLRFIEDLVNRHIISEYG-DKYTFQFV-GGDTKSATD 440 (563) T ss_pred CCCHHHccccccccccccccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcc-cccEEEec-cCCHHHHHH Confidence 99999998532 3468899999999999999999999999999997654 34455553 556777766 Q ss_pred HH--HHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccc-------------------cCc-ccCC Q lcl|Aclame:pro 339 EI--VKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDK-------------------VGI-KGKG 396 (406) Q Consensus 339 ~~--~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~-------------------~~~-~~~g 396 (406) .+ ..++++|+||+||+|+++|+||+ ++||++++|.++++++........ ... +.++ T Consensus 441 ~~~~~~~~~~G~lT~NE~R~~~gl~Pi--~gGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (563) T protein:vir:99 441 KLNILKLETQIFKTVNEAREEQGKKPI--EGGDIILDASFLQGTAQLQQDKQYNDGKQKERLQMMMSLLEGDNDDSEEGQ 518 (563) T ss_pred HHHHHHHhcCCccCHHHHHHHhCCCCC--CCcceeecccccccccccccccCCCccccchhhhhcccccCCCCCCCCCCC Confidence 54 35688999999999999999999 679999999999887654321100 000 0000 Q ss_pred C-c---cCCCCCCC Q lcl|Aclame:pro 397 G-E---VNAEEDKS 406 (406) Q Consensus 397 g-~---~~~~~~~~ 406 (406) . + ++.+.++. T Consensus 519 ~~~~~~~~~~~~~~ 532 (563) T protein:vir:99 519 STDSSNDDKEIGTD 532 (563) T ss_pred CCCCCCCccccccc Confidence 0 0 11111111 No 84 >protein:vir:4194 Length: 540 # NCBI annotation: putative portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:88 # MgeName: psiM100 # Cross-refs: genbank:acc:NP_071819;genbank:gi:11863102;genbank:GeneID:1257604 Probab=100.00 E-value=2.4e-70 Score=402.27 Aligned_cols=390 Identities=16% Similarity=0.098 Sum_probs=280.5 Q ss_pred Ccc-----cccccCCCCcchhhHHHhhcCCcccccc----hhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccch Q lcl|Aclame:pro 1 MSF-----FQPLGTSKVSYDDYISSVLAGDVSQKYL----GVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDED 71 (406) Q Consensus 1 M~~-----f~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 71 (406) |++ ++..++...+..-+ .+-+.....+.++ ...+..+++|++||++||++||++|++++..+.. T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pp~~~~~La~~~~~n~~v~scI~~ia~~ia~~~~~i~~~~~~------ 78 (540) T protein:vir:41 6 LSIKSLEKYRAIKGDTDSQALK-EDRFEEYVEPKVHPLVLLSLLQVNPYHASACSIKANDILRTGYLIDGDDGG------ 78 (540) T ss_pred cChhhccchhhhhccccccccc-cCCCCccccCCCCHHHHHHHHHhcHHHHHHHHHHHHHHhcCCceEecCccc------ Confidence 333 21222221111100 1111111111222 2334578899999999999999999999754432 Q ss_pred HHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc-------eEEEEE-- Q lcl|Aclame:pro 72 INYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE-------IVYTFT-- 142 (406) Q Consensus 72 ~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~-------~~~~~~-- 142 (406) +..+ .||+++|+++||+.++.+++++||+|++++++ ..|+|++|+|++|..|++..+..+. ..+++. T Consensus 79 ~~~~---lpN~~~t~~~f~~~~v~dlll~Gnayv~i~r~-~~G~~~~L~~i~~~~V~v~~~~~~~~~~~d~~~~~~~~~~ 154 (540) T protein:vir:41 79 VEEL---LRACRPSFEFILLQALEDLQVFNYCTLEVVRD-DQGEPVRLDYIPAHTVRVHRDGSRYMQTWDGIHVTYFKDY 154 (540) T ss_pred hhhh---ccCCCCCHHHHHHHHHHHHHhcCCeEEEEEEC-CCCcEEEEEEeCCcceEEeEcCceeEeeecCceeeeeecc Confidence 2332 49999999999999999999999999999998 4589999999999999986654321 111111 Q ss_pred -------eecCCeEEEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHH Q lcl|Aclame:pro 143 -------DMLTAKQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGD 214 (406) Q Consensus 143 -------~~~~g~~~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e 214 (406) .......+.+++++|||+|.+ +.++++|+||+.++..+|..+.++.+++.++|+||++|++++..++.++++ T Consensus 155 ~~~~~~~~~~g~~~~~~~~~eViHir~~~~~~~~~G~Spi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~giL~~~g~l~~e 234 (540) T protein:vir:41 155 RYEGEVNPDNGEDQDGVGANEIIFIHLPSPICSYYGVPRYLSAAPSILAMQKIDEYNYAFFDNYTIPSYVITVTGEFEDE 234 (540) T ss_pred cccceeeccccccceeecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCcccCch Confidence 011223467899999999976 478899999999999999999999999999999999999999987766543 Q ss_pred H----------HHHHHHHHHHHhcc--cccCceeecc------CCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHH Q lcl|Aclame:pro 215 A----------RQRARQEFEKMREG--SVGGSPLVFD------STMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSY 276 (406) Q Consensus 215 ~----------~~~~~~~~~~~~~g--~~~~~~~vl~------~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~ 276 (406) + .+++++.|+..++| .++|+++||. +|++|++++++++|+||+|++++++++||++|||||. T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~nag~~~vLe~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~~eIa~afgVPp~ 314 (540) T protein:vir:41 235 MELGSDGEPTGRTVLQGLIEDNFKYLKEAPHTPLVFSIPGGDTVEVTFTPLNTSQKELSFREYAAEKKHDIAAAHMIDPY 314 (540) T ss_pred hccchHHHHHHHHHHHHHHHHHhccccccccceEEEecCCCcccceeEEecccchhHHHHHHHHHHHHHHHHHHhCCCHH Confidence 2 35566777777765 4778898884 7999999999999999999999999999999999999 Q ss_pred Hhccc----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhHH-HHHHHHHHHhCCCcCH Q lcl|Aclame:pro 277 KLGVN----SPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGR-NVDEIVKLVNNQILTP 351 (406) Q Consensus 277 ~lg~~----~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~t~ 351 (406) +||.. .+++|++++.+.|+++||.|++++||++||++|++..+. .++++|+....+.. ..+.+..++++|++|+ T Consensus 315 ~lG~~~~~~~n~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~~-~~~i~f~~~~ll~~D~~~~~~~lv~~G~lT~ 393 (540) T protein:vir:41 315 RLGITDVGPLGGNFAEVARRTYYESVVRPQQEIVSSVLTDFIQLKLDP-GARFVFNEEILMESEFVHNYALLVQCGVLTP 393 (540) T ss_pred HcCcccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC-ceEEEecchhhcchHHHHHHHHHHhCCCCCH Confidence 99853 346899999999999999999999999999999875543 56788887655443 3445677899999999 Q ss_pred HHHHHHh-CCCCCCCCCCCeeeeccCccchhhccccccccC-cc-------cCCCccCC--------CCCCC Q lcl|Aclame:pro 352 NQGLVEL-GKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVG-IK-------GKGGEVNA--------EEDKS 406 (406) Q Consensus 352 NE~R~~~-g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~-~~-------~~gg~~~~--------~~~~~ 406 (406) ||+|+.+ |++| ++|.++.|.|+.+.+.......... +. .+.....+ .++++ T Consensus 394 NE~Re~L~g~e~----gdd~~l~p~n~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 461 (540) T protein:vir:41 394 SEVREKLFGLDG----GPDMFMVPSSIGKSAMKRQKRNYEKNQINEIKRTYAKYKPRIQEIISSESPLEDKK 461 (540) T ss_pred HHHHHHhCcCcC----CCcccccccccccccccccccccCCCCccccccccchhcccccCcccccccccccc Confidence 9999854 5554 3566778888866443222110000 00 00000000 01101 No 85 >protein:vir:4156 Length: 542 # NCBI annotation: portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:87 # MgeName: psiM2 # Cross-refs: genbank:acc:NP_046965;genbank:gi:9630535;genbank:GeneID:1261709 Probab=100.00 E-value=2.7e-69 Score=396.53 Aligned_cols=390 Identities=16% Similarity=0.088 Sum_probs=283.2 Q ss_pred ccccccC------------CCCcchhhHHHhhcCCcccccchh----hhhccHHHHHHHHHHHHhhccceeEEEecCCcc Q lcl|Aclame:pro 3 FFQPLGT------------SKVSYDDYISSVLAGDVSQKYLGV----SALKNSDILTATSIIAGDIARFPLVKKDVNGDI 66 (406) Q Consensus 3 ~f~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~----~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 66 (406) +|+...+ ............+.+.....++.. .+..+++|++||++||++||++|++++..+.. T Consensus 1 ~~~~~~~i~s~~~~~~i~~~~~~s~~~~~~~~~~~~~pp~~~~~la~l~~~n~~v~scI~~ia~~IA~l~~~~~~~~~~- 79 (542) T protein:vir:41 1 MFNYHLSIRSLEKYKAIKREEVESQALGETRFEEYVEPKVNPLVLLSLLQVNPYHASACSIKANDIIRTGYILEGDDEG- 79 (542) T ss_pred CccccccccccccchhhhhccccccccccccCCccccCCCCHHHHHHHHhhcHHHHHHHHHHHHHHhhCceeeecccch- Confidence 4542111 111111100111111111223332 23457899999999999999999999754322 Q ss_pred cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceE-------- Q lcl|Aclame:pro 67 IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIV-------- 138 (406) Q Consensus 67 ~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~-------- 138 (406) .+++..||+++++++||+.++.+++++||+|++++++. .|++++|+|++|+.+++..+..+... T Consensus 80 -------~l~~~lpN~~~s~~~f~~~~v~~lll~Gnayi~i~rd~-~G~~~~L~~l~~~~v~v~~d~~~~~~~~~~~~~~ 151 (542) T protein:vir:41 80 -------VVDEFIRACKPSFEYVLLRALEDLQVFNYCTLEVVRDD-RGDPIRFEYIPSHTIRVHKDGSRYRQTWDGVNIT 151 (542) T ss_pred -------hhhhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcC-CCcEEEEEEEcCcceEEEEcCCeeEeeecCCcce Confidence 23345699999999999999999999999999999984 48999999999999998766443211 Q ss_pred EEEEe--------ecCCeEEEEcceeeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecC Q lcl|Aclame:pro 139 YTFTD--------MLTAKQVKCFAHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGA 209 (406) Q Consensus 139 ~~~~~--------~~~g~~~~~~~~~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~ 209 (406) +...+ ........+++++|||+|.++ .++++|+||+..+..++..+.++.+++.++|+||++|++++..++ T Consensus 152 ~~~~y~~~~~~~~~~g~~~~~~~~~eIiHir~~~~~~~~~Glspi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~gIL~~~~ 231 (542) T protein:vir:41 152 HFKDYRYEGEINPETGEDQDSVGANELVFIHIPSPVCSYYGVPRYVSAAPAILAMQKIDEYNYAFFDNYTIPSYVITVTG 231 (542) T ss_pred eEEeecccccccccccccccccCcccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCC Confidence 11000 011123457889999999765 688999999999999999999999999999999999999997653 Q ss_pred ----------CCCHHHHHHHHHHHHHHhcc--cccCceeec------cCCceeeeccCChhHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 210 ----------QLSGDARQRARQEFEKMREG--SVGGSPLVF------DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKAL 271 (406) Q Consensus 210 ----------~~~~e~~~~~~~~~~~~~~g--~~~~~~~vl------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~f 271 (406) ..++++++++++.|++.+.| .++|+++|+ ++|++|++++.+++|++|++++++++++||++| T Consensus 232 ~l~de~~~~~~~~~e~~~~lk~~~~~~~~g~~~n~gk~~vL~~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~~~Ia~af 311 (542) T protein:vir:41 232 EFEDELEEDPDGNPTGRTVIQALIEDNFKHLKEAPHTPLVFSIPGGDTVKVTFTPLNTSQKELSFREYAAEKKYDIAAAH 311 (542) T ss_pred ccccccccccccCHHHHHHHHHHHHHHHhhhhcccCceeEeeccCCcccceeEEEcCCChhHHHHHHHHHHHHHHHHHHh Confidence 56889999999999999976 467788888 479999999999999999999999999999999 Q ss_pred cCCHHHhcccc----cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhH-HHHHHHHHHHhC Q lcl|Aclame:pro 272 RVPSYKLGVNS----PNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTG-RNVDEIVKLVNN 346 (406) Q Consensus 272 gvpp~~lg~~~----~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 346 (406) ||||.+||... +++|+|++.+.|+++||.|+++.||++||++|++..+. .++++|+....++ .+.+.+..++++ T Consensus 312 gVPp~~lG~~~~~t~n~sn~Eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~~-~~~~~f~~~~ll~~d~~~~~~~~v~~ 390 (542) T protein:vir:41 312 MIDPYRLGIADTGPLGGNFAEVTRRTYYESVVRPQQNIISSILTDFFQVKFNP-KTRFKFNDETLLESDSVRNCALLVQS 390 (542) T ss_pred CCCHHHhCcCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC-ceEEEecchhhcchHHHHHHHHHHhC Confidence 99999999642 34789999999999999999999999999998876554 4577887655443 345567788999 Q ss_pred CCcCHHHHHHHh-CCCCCCCCCCCeeeeccCccchhhccc---cccc-----cCcccCCCccCCCCCCC Q lcl|Aclame:pro 347 QILTPNQGLVEL-GKQKSTDPNMDRYQSSLNYVFLDKKEE---YQDK-----VGIKGKGGEVNAEEDKS 406 (406) Q Consensus 347 g~~t~NE~R~~~-g~~p~~~~~gd~~~~~~n~~~~~~~~~---~~~~-----~~~~~~gg~~~~~~~~~ 406 (406) |++|+||+|+.+ |++|. +|.++.|.|......... .+.. .+...+++++-++..++ T Consensus 391 GilT~NE~Re~L~g~~pg----dd~~l~p~~~~~~~~~~~~~n~~~~~~~~~~k~~~k~~~~~~~~~~~ 455 (542) T protein:vir:41 391 GVLTPAEARERLFGLDGG----PDIFMVPSKGAAKSVKRQERNYEKNQIREIRKIYAKYRPRFNEIISS 455 (542) T ss_pred CCCCHHHHHHhhCCCCCC----CccccccccccccccccCCcCCCCCchhhhhhcccccCccccccccc Confidence 999999999854 66543 345566777653221111 1100 11122233221111111 No 86 >protein:vir:3153 Length: 467 # NCBI annotation: capsid protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665924;genbank:gi:22091110;genbank:GeneID:951257 Probab=100.00 E-value=2.2e-68 Score=391.52 Aligned_cols=371 Identities=13% Similarity=0.047 Sum_probs=277.1 Q ss_pred chhhhhccHHHHHHHHHHHHhhccceeEEEecCCc-------ccccchHHHHhhhhccccC--------CHHHHHHHHHH Q lcl|Aclame:pro 31 LGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD-------IIHDEDINYLLNVKSTSNA--------SARTWKFAMAV 95 (406) Q Consensus 31 ~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~-------~~~~~~~~~lL~~~Pn~~~--------~~~~f~~~~~~ 95 (406) .+.-+..+++|++||++||++||++|++++...+. ....+....++..+||+.+ ++.+||+.++. T Consensus 1 l~~l~~~n~~v~~ci~~ia~~ia~~p~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~pn~~~~~~~~~~~t~~~~~~~~~~ 80 (467) T protein:vir:31 1 MAELLEHNETHAKCVHAKSRYVAGFGINIIPHPEAEDPDRDGEQYERVWDFWFGDDSNWQVGPMESERATATNVLQTAWT 80 (467) T ss_pred ChhhhhcCHHHHHHHHHHHHhhhcCCeEEEEccCcccccchhhhhhhHHHHhhccCCCccccchhhHhhHHHHHHHHHHH Confidence 44444568999999999999999999999754321 1112223446677888765 66789999999 Q ss_pred HHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCc-------ceEEE---------------------EEeecCC Q lcl|Aclame:pro 96 NAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNH-------EIVYT---------------------FTDMLTA 147 (406) Q Consensus 96 ~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g-------~~~~~---------------------~~~~~~g 147 (406) +++++||+|++++++ ..|+|++++|++|+.|++..+..+ ...|+ +.....+ T Consensus 81 ~l~l~Gn~~i~~~r~-~~G~~~~l~~l~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (467) T protein:vir:31 81 DYEAIGWLTIEILTQ-TDGTPTGLAYVPGHTIRKRMDERGFVQLLEEKEKYFGVAGDRYQTNGNGDLDPVFVDADDGSTG 159 (467) T ss_pred HHHhcCCeEEEEEEC-CCCcEEEEEEeCCceeEeeeecceeEeecCCceeeEEeccccceeecccceeeeeeeecccccc Confidence 999999999999998 458999999999999988665432 11111 1122345 Q ss_pred eEEEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CCCCHHHHHHHHHHHHH Q lcl|Aclame:pro 148 KQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQLSGDARQRARQEFEK 225 (406) Q Consensus 148 ~~~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~~~~~~~~~~ 225 (406) ..+.+++++|||+|.+ +.++++|+||+.++..++..+.++.++..++|+||+.|++++..+ +.+++++.+++++.|++ T Consensus 160 ~~~~~~~~diih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~~~~~~~ 239 (467) T protein:vir:31 160 TSVSNPANELIFKRNHSPLYPHYGAPDIIPAVKTIRGDSAAQDYNIDFFENDGVPRIAIIVKGAELTEKGREEMRNLIED 239 (467) T ss_pred ceeEeccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHHHHHHHHHHHHh Confidence 6778999999999976 467899999999999999999999999999999999999999865 57899999999999998 Q ss_pred Hhcc------------cccCceeeccCCceeee-------cc-CChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc--c Q lcl|Aclame:pro 226 MREG------------SVGGSPLVFDSTMEYTP-------LE-IDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNS--P 283 (406) Q Consensus 226 ~~~g------------~~~~~~~vl~~g~~~~~-------l~-~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~--~ 283 (406) .+++ .+++++++++.|+++++ ++ .++.|+||++++++++++||++|||||.+||... + T Consensus 240 ~~~~~~~~~~~~~~g~~n~~~~~~l~~g~~~~~~~~~~~~ls~~~~~d~qf~e~~~~~~~~Ia~~fgVpp~~lG~~~~~~ 319 (467) T protein:vir:31 240 NNEDNHRTAFIETEKIVQNEDYLNLADGADRSDVEIRLEPLTVGIDEEASFLEFRGRNEHDILKVHDVPPVIAGVVESGA 319 (467) T ss_pred hhcchhhhhhhhhcccccccccccccCCCcccccceeEEeccccChhhHHHHHHHHHHHHHHHHHhCCCHHHcccCCCCC Confidence 7753 46777888887765555 43 3678999999999999999999999999999643 3 Q ss_pred -chhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccch-hhhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHH Q lcl|Aclame:pro 284 -NQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDR-RLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVE 357 (406) Q Consensus 284 -~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~ 357 (406) ++|++++.+.|++.+|.|+++.||++||++|++..+. ..++++|++ +.+.+++++.+..++++|++|+||+|++ T Consensus 320 ~~s~~e~~~~~f~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~i~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~ 399 (467) T protein:vir:31 320 FSTDAEEQRKEFAEETIQPKQHDFGELLYELVHKQGLDAPDWTIEFELAKPDTKLQDVEIASQRVQAMQGLLTVNELRDE 399 (467) T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhccCCceEEEecchhhccCHHHHHHHHHHHHhCCCcCHHHHHHH Confidence 4678999999999999999999999999999986543 345566654 4678889999999999999999999999 Q ss_pred hCCCCCCCCCCCeeeeccCccchhhcc--ccccccC-cccCCCccCCCCC----CC Q lcl|Aclame:pro 358 LGKQKSTDPNMDRYQSSLNYVFLDKKE--EYQDKVG-IKGKGGEVNAEED----KS 406 (406) Q Consensus 358 ~g~~p~~~~~gd~~~~~~n~~~~~~~~--~~~~~~~-~~~~gg~~~~~~~----~~ 406 (406) +|+||+++ + .+.+.+..+..... ....... +..+++++..+++ ++ T Consensus 400 ~Gl~pi~d--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (467) T protein:vir:31 400 FGFEPFPE--E--HVYGGETLVAEVTGGSGPGGGIGDQIEQLVEDRADEIIDSYQA 451 (467) T ss_pred hCCCCCCc--c--cccCCcccccccccccCCCCcccCcCCCCCCCcccchHhhhhh Confidence 99999943 2 23232221111000 0000000 0111111110000 01 No 87 >protein:vir:99452 Length: 651 # NCBI annotation: hypothetical protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:1595 # MgeName: BJ1 # Cross-refs: genbank:acc:YP_919077;genbank:gi:119757035;genbank:GeneID:4606105 Probab=100.00 E-value=8.2e-66 Score=377.41 Aligned_cols=391 Identities=14% Similarity=0.081 Sum_probs=289.4 Q ss_pred CcccccccC---------------------CCCcchhhHHHhhcCCcccccchhh----hhccHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 1 MSFFQPLGT---------------------SKVSYDDYISSVLAGDVSQKYLGVS----ALKNSDILTATSIIAGDIARF 55 (406) Q Consensus 1 M~~f~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~----a~~~~~v~~~i~~ia~~ia~~ 55 (406) |+=-+...+ +..+.+.+ ... .+..-+.+++.. +..++++++||+++++.||.+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~p~~~~~~L~~~~e~~~~~~~~i~~~~~~iag~ 78 (651) T protein:vir:99 1 MTDTTGETQETKVHVEGLGGEADLAKSPNSTQIPDHRI-QSH-NVGVNPPYNPDRLAAFLELNETLATGIRKKSRYEVGF 78 (651) T ss_pred CCCccceeeeeEEEeecccccccccccccccccchhhh-ccc-CCCCCCCCCHHHHHHHHhcChHHHHHHHHHhhhhhcc Confidence 443221000 00111111 111 112223334433 234889999999999999999 Q ss_pred eeEEEec---CCccc-------------ccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEE Q lcl|Aclame:pro 56 PLVKKDV---NGDII-------------HDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQF 119 (406) Q Consensus 56 ~~~~~~~---~~~~~-------------~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l 119 (406) +|.+... +.... ..++.+..+...+|+.++..++++.++.+++.+||+|+.++++.. |.|..+ T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~~t~~~i~~~~~~Dle~tGna~ieiIrn~~-g~pv~L 157 (651) T protein:vir:99 79 GFDLVPAQGVDGDDASDAQREVARNFWRGRSSRWQTGPNQAKTPATPERVKELARQDYHGVGWLALEMLTDIE-GRPVGL 157 (651) T ss_pred CceeeecccCCCCccchHHHHHHHHHhhccchhhcccccccCCCCCHHHHHHHHHHHHHHHhhHhhhhhhcCc-cchhhh Confidence 9987532 11111 112223333355789999999999999999999999999998755 678888 Q ss_pred eecCCeeEEEEEccCc---------------------------------------------------------------- Q lcl|Aclame:pro 120 QFYRPSETTVEETDNH---------------------------------------------------------------- 135 (406) Q Consensus 120 ~~l~p~~~~~~~~~~g---------------------------------------------------------------- 135 (406) +.+++..+++..+... T Consensus 158 ~~lp~~~~Rv~~~~~~~~~~~~~ll~~~pn~~~~~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~d 237 (651) T protein:vir:99 158 AYVPARTVRVRRPQNRFDQPRHPEEGRYVDGDVADIASRGYVQIRNGNRRYFGEAGDRYRGQEVVIDESGDEPTIRYRED 237 (651) T ss_pred hhcChhheeeecccccccchhhhhhhcccccccchhHHHHHHHHHhcCcceEEEeeccccceeeeeccCCcceeEEeccC Confidence 8888776544321100 Q ss_pred -----------ceEEEEEeecCCeEEEEcceeeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcce Q lcl|Aclame:pro 136 -----------EIVYTFTDMLTAKQVKCFAHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGI 203 (406) Q Consensus 136 -----------~~~~~~~~~~~g~~~~~~~~~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ 203 (406) ...+.+.....+....+++++|||||.++ .++++|+||+..+..+|..+.++.+++.++|+||+.|++ T Consensus 238 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~eViHir~~~~~~g~~G~spl~~a~~~i~~a~~a~~~~~~~f~NG~~p~g 317 (651) T protein:vir:99 238 EESEREPIFVDRETGDVTTGDANGLENRPANELIFIPNPSILEDDYGVPDWVSAIRTISADEAAKDYNRDFFDNDTIPRM 317 (651) T ss_pred cceeeeeecccceeeeEEEcCCCceeEecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCce Confidence 00001111222334568899999999875 689999999999999999999999999999999999999 Q ss_pred EEeec-CCCCHHHHHHHHHHHHHHhcccccCceeeccC-----------CceeeeccCCh-hHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 204 LTMKG-AQLSGDARQRARQEFEKMREGSVGGSPLVFDS-----------TMEYTPLEIDT-NVLQLITSNNFSTAQIAKA 270 (406) Q Consensus 204 ~~~~~-~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~-----------g~~~~~l~~~~-~d~~~~e~~~~~~~~Ia~~ 270 (406) ++..+ +.+++++++++++.|++.++ ++|++++|+. |++|+++++++ +|+||+|++++++.+||++ T Consensus 318 il~~~~~~ls~e~~~~lr~~~~~~~~--nagk~~vL~~~~~~~~~~~~~g~~~~pls~~~~~D~qfle~r~~~~~eIa~a 395 (651) T protein:vir:99 318 VIKVTGGELSEESKRDLRQMLNGLRE--ESHRAVVLEVEKFQSQLDEDVEIELEPMGQGISEEMDFRQFREKNEHEIAKV 395 (651) T ss_pred EEEecCCCCCHHHHHHHHHHHHHHhc--cCCceEEeecccccccccccCCceEEEcCcCchhhHHHHHHHHHHHHHHHHH Confidence 99976 46899999999999998775 5678888765 99999999987 5999999999999999999 Q ss_pred hcCCHHHhcc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchh---hhhhhhcc----cchhHHHHHHHH Q lcl|Aclame:pro 271 LRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRR---LYHIEFDT----RSVTGRNVDEIV 341 (406) Q Consensus 271 fgvpp~~lg~--~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~---~~~~~~~~----~~~~~~~~~~~~ 341 (406) |||||.+||. .++++|++++.+.|+++||+|++++||++||++|++..++. .++++|+. +.|.+++++.+. T Consensus 396 fgVPp~~lG~~~~~~~sn~E~~~~~f~~~tL~P~~~~ie~eln~kLl~~~e~~~~~~i~~ef~~~~llr~D~~~~~e~~~ 475 (651) T protein:vir:99 396 LEVPPVKIGVTDSANRSNSDQQDKDFALEVIQPEQHTFAEWLYQIIHQQALGVTDWTIEYELRGADQPKQEAQLAEQRVR 475 (651) T ss_pred hCCCHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCceEEEEeccchhhhccHHHHHHHHH Confidence 9999999996 45789999999999999999999999999999999876643 24556653 567788899999 Q ss_pred HHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 342 KLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 342 ~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) .++++|++|+||+|+++|+||+++++|+.++.+.+....... .+||+++++++.. T Consensus 476 ~~i~~G~~T~NE~R~~lglppi~~~~gd~~l~~~~~~~~g~~----------~~gge~~~~~~~~ 530 (651) T protein:vir:99 476 AMRLAGVGLVDEAREELGLDPLGEPYGEMTLSEFEAEVAGDV----------AGGGETEAVHEPP 530 (651) T ss_pred HHHhCCCcCHHHHHHHhCCCCCCCcccccccccccccccccc----------ccCCCCcccccCc Confidence 999999999999999999999999999999888776554322 2222222111111 No 88 >protein:vir:79772 Length: 648 # NCBI annotation: portal protein # Family: family:all:3222 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429612;genbank:gi:156564103;genbank:GeneID:5525537 Probab=100.00 E-value=6.8e-65 Score=372.38 Aligned_cols=398 Identities=10% Similarity=0.010 Sum_probs=267.1 Q ss_pred Ccccc---------------cccCCCCcch---hhHHHhhcCCc---ccccch----hhhhccHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 1 MSFFQ---------------PLGTSKVSYD---DYISSVLAGDV---SQKYLG----VSALKNSDILTATSIIAGDIARF 55 (406) Q Consensus 1 M~~f~---------------~~~~~~~~~~---~~~~~~~~~~~---~~~~~~----~~a~~~~~v~~~i~~ia~~ia~~ 55 (406) |++=. +...+...+. ..+..-..+.. .+.+.- .....+|.|++||++||++||++ T Consensus 34 ~~~~~~p~~~~~~~~~~~~~~~d~~~~~~~r~g~~~~~~~~g~~~~~epp~d~~~l~~l~~~np~V~~aI~iia~~ia~l 113 (648) T protein:vir:79 34 MQLGEAPGAMPKGGGGGGSAKRDPKMSLVKRIGLAIMDGGGGGRDFEEPEFDFNEITSAYNTEGYVRQAVDKYIEMMFKA 113 (648) T ss_pred cccCCCccccCCCCcccccccccchhHHHHHhHHHHHhhcCCccccccCCcCHHHHHHHHhcChHHHHHHHHHHHHHhhC Confidence 44321 1111111110 01111111111 011111 12236899999999999999999 Q ss_pred eeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCce--------------eEEEee Q lcl|Aclame:pro 56 PLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQ--------------ALQFQF 121 (406) Q Consensus 56 ~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~--------------~~~l~~ 121 (406) ||++...+......++. .++..+||+.+++++||+.++.+++++||+|++++++..++. +..+|| T Consensus 114 ~~~i~~~~~~~~~~~~~-~~ll~rPn~~~t~~~f~~~l~~~lll~GNAYveiiRd~~G~~~~~l~~~~~~~~~~v~~l~p 192 (648) T protein:vir:79 114 DWDFVSKNPNAVEYIRM-RFTLMAEATQIPTNQLFIEIAEDLVKYCNVVIAKSRAKDALPFQGMNVMGVGDSMPVAGYFP 192 (648) T ss_pred cceEEecCCccchhhHH-HHHhhccCCCCCHHHHHHHHHHHHHhcCCeEEEEEecCCCccchhhhhhhhccccceeeeEe Confidence 99987765544444433 344569999999999999999999999999999999866432 477999 Q ss_pred cCCeeEEEEEccCcceEEE-EEeecCCeEEEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 122 YRPSETTVEETDNHEIVYT-FTDMLTAKQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGF 199 (406) Q Consensus 122 l~p~~~~~~~~~~g~~~~~-~~~~~~g~~~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~ 199 (406) ++|..+++..+..|.+.++ +....++..+.|++++|||||++ +.++++|+||+.+++.+|..+.++.++..++|+||+ T Consensus 193 l~p~~v~v~~d~~g~~~~Y~y~~~g~~~~~~~~~~dIIHik~~~~~d~~~GlSpi~~a~~aI~l~~aa~~~~~~fF~NGa 272 (648) T protein:vir:79 193 LNLASMKVKRDKFGMIKGWQQEQEGQDKPQKFKPEDIVHIYYKREKGRAFGTPWLLPALDDIRALRQVEENVLRLVYRNL 272 (648) T ss_pred ecCceeEEEEcCCCceeeeEEEecCCceeEEecCccEEEEccCCCCCCceeccHHHHHHHHHHHHHHHHHHHHHHHhccC Confidence 9999999999888876544 33445556778999999999964 678999999999999999999999999999999999 Q ss_pred CcceEEeec-CCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeecc----CChhHHHHHHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 200 SSGILTMKG-AQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLE----IDTNVLQLITSNNFSTAQIAKALRVP 274 (406) Q Consensus 200 ~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~----~~~~d~~~~e~~~~~~~~Ia~~fgvp 274 (406) +|++++..+ ....+++.++.++.|++.+.+.. +.++++++..+. .+++|+||++++++++++||++|||| T Consensus 273 ~P~gil~~~~~~~~~e~~k~~~e~~~~~~~~~~-----i~gg~v~~~~~~i~~~~s~~dlqfle~rk~~~~eIa~aFgVP 347 (648) T protein:vir:79 273 HPLWHVKVGLEQEGFGAEEGEVDLVRGEVENMD-----VEGGMVTTERVNISSIASNQIIDAKEYLKHFEQRAFTVLGVS 347 (648) T ss_pred CccEEEEeCCCccchHHHHHHHHHHHHhccccc-----ccccccccceeeccccCCHHHHHHHHHHHHHHHHHHHHhCCC Confidence 999999864 33455667777777877775532 233333433332 25689999999999999999999999 Q ss_pred HHHhcccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc----cCccc-----hhhhhhhhcc----cchhHHHHHH Q lcl|Aclame:pro 275 SYKLGVNS--PNQSVAQLMEDYVTNDLPFYFDAITSELGLKT----LNDKD-----RRLYHIEFDT----RSVTGRNVDE 339 (406) Q Consensus 275 p~~lg~~~--~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l----~~~~~-----~~~~~~~~~~----~~~~~~~~~~ 339 (406) |.+||... ++++.+ +...++..++.|++..++..++.++ +.... ....+++|+. +.+.+++++. T Consensus 348 P~lLG~~~~ss~stae-~~~~~~~~~i~~l~~~i~~~le~~~~~~ll~e~~l~~~l~~d~~ieF~~~~Llr~D~~~~a~~ 426 (648) T protein:vir:79 348 ELMMGRGGTASRSTGD-NLSSDFKDRIKALQKVMATFINEFMVKEILMEGGFDPVLNPDDKVEFRFNEIDMDSKIKLENQ 426 (648) T ss_pred HhHcccCCCccchHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccceEEEeecccchhhHHHHHHH Confidence 99999643 344554 4455567788888777766555433 21111 1122344543 4566778888 Q ss_pred HHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccC------cccCCCc----cCCCCCCC Q lcl|Aclame:pro 340 IVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVG------IKGKGGE----VNAEEDKS 406 (406) Q Consensus 340 ~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~------~~~~gg~----~~~~~~~~ 406 (406) +..++++||||+||+|+++|+||++++++ ..++..++.+............ ....+++ +.++++++ T Consensus 427 ~~~l~~~GilT~NEaR~~lGlpPi~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~eg~~~e~~~~~~~ 502 (648) T protein:vir:79 427 AVFLYEHNAISEDEMRELIGRDPVDDGEG-RAKMHLQMVTIAQATALAALAPTPAGGSSASASGDKKKKATDNKTKP 502 (648) T ss_pred HHHHHhCCCcCHHHHHHHhCCCCCCCCCC-ccccccccccchhccccccCCCCCCCCCCCCccccccccccCCCCCC Confidence 88999999999999999999999976554 3345555555433221111000 0001110 11111111 No 89 >protein:vir:78641 Length: 278 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1855 # MgeName: tp310-2 # Cross-refs: genbank:acc:YP_001429941;genbank:gi:156603995;genbank:GeneID:5525387 Probab=100.00 E-value=2.5e-61 Score=352.80 Aligned_cols=274 Identities=18% Similarity=0.259 Sum_probs=249.6 Q ss_pred hccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEE Q lcl|Aclame:pro 52 IARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEE 131 (406) Q Consensus 52 ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~ 131 (406) ||++|+++++.++. ..|+++++|+.+||+++|+++||+.++.+++++||||++++++ ..|++.+++|++|+.|++.. T Consensus 1 ia~l~~~~~~~~~~--~~~~l~~lL~~~PN~~~t~~~f~~~~~~~ll~~Gna~~~i~r~-~~G~~~~l~~l~~~~v~v~~ 77 (278) T protein:vir:78 1 MASLPLKMYEDYKV--VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERD-IYHQPSKLFLLNPDVVEMLI 77 (278) T ss_pred CccceeEEEecCcc--cccHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCCEEEEEEEC-CCCcEEEEEEECCceeEEEE Confidence 99999999986543 4689999999999999999999999999999999999999997 55899999999999999999 Q ss_pred ccCcceEEEEEeecCCeEEEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCC Q lcl|Aclame:pro 132 TDNHEIVYTFTDMLTAKQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQ 210 (406) Q Consensus 132 ~~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~ 210 (406) +.++...++.....+|..+.+++++|+|+|++ +.++++|+||+.++..++..+.++.+++...+.+ .|++++..+.. T Consensus 78 ~~~~~~~~y~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~i~~~~~~ 155 (278) T protein:vir:78 78 ENQSRELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQK--PDSFMLKYGSN 155 (278) T ss_pred cCCCceEEEEEEcCCceEEEEccccEEEECCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHhcC--CCcEEEEeCCC Confidence 88887777767778888999999999999976 6788999999999999999999999887655544 57899999999 Q ss_pred CCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHH Q lcl|Aclame:pro 211 LSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVA 288 (406) Q Consensus 211 ~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~ 288 (406) +++|+.++++++|++.+. ++|+++++++|++|+++++++.|++++|.+++++++||++|||||.+||. .++++|++ T Consensus 156 l~~e~~~~~~~~~~~~~~--~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~sn~~ 233 (278) T protein:vir:78 156 VGKEKRQQVLEDFKQYYE--ENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNE 233 (278) T ss_pred CCHHHHHHHHHHHHHHhc--cCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHH Confidence 999999999999998875 56789999999999999999999999999999999999999999999996 35789999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCccchh-hhhhhhcccch Q lcl|Aclame:pro 289 QLMEDYVTNDLPFYFDAITSELGLKTLNDKDRR-LYHIEFDTRSV 332 (406) Q Consensus 289 ~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~-~~~~~~~~~~~ 332 (406) ++.+.|++.+|+|+++.||++||++|+++.++. .++++|+++.+ T Consensus 234 ~~~~~~~~~~l~P~~~~i~~~ln~~L~~~~e~~~g~~~~f~~~~l 278 (278) T protein:vir:78 234 ELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKIGILNLTLNLI 278 (278) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhcCCceEEEecccC Confidence 999999999999999999999999999988764 58899998877 No 90 >protein:vir:100328 Length: 346 # NCBI annotation: capsid portal protein Q # Family: family:all:196 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655469;genbank:gi:109289937;genbank:GeneID:4157371 Probab=100.00 E-value=5.2e-52 Score=301.75 Aligned_cols=316 Identities=14% Similarity=0.120 Sum_probs=232.6 Q ss_pred CcccccccCCCC-cc--hhhHHHhhcCCcccccchhhhhccHHHHHHHHH----------------HHHhhccceeEEEe Q lcl|Aclame:pro 1 MSFFQPLGTSKV-SY--DDYISSVLAGDVSQKYLGVSALKNSDILTATSI----------------IAGDIARFPLVKKD 61 (406) Q Consensus 1 M~~f~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~----------------ia~~ia~~~~~~~~ 61 (406) |+=.+++..... +. ......+..|. +..+|...+++.|+.. +|+.+-..+.+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~la~l~~~~~~h--- 71 (346) T protein:vir:10 1 MKKQLRKNLTQNDRLQPQAQTEIFSFGD------PIPVLDRADILNYLECSAMYEKWYNPPMSFDGLAKSLRSSTHH--- 71 (346) T ss_pred CCcccCCCCCcccccccccCeEEEecCC------cceecCchhHHHHHHHhhcCCceEecCCCHHHHHHHHHhhhhc--- Confidence 776544322111 10 00011111111 2222222223322222 23222222222 Q ss_pred cCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEE Q lcl|Aclame:pro 62 VNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTF 141 (406) Q Consensus 62 ~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~ 141 (406) ...-....|.+..++ .+||+++|+++|++ ++.+++++||+|++++++ ..|++++|+|++|..+++..+.++ .. ++ T Consensus 72 ~~~i~~k~n~l~~l~-~~Pn~~~t~~~f~~-~~~d~ll~Gnay~~i~r~-~~G~~~~L~pl~~~~v~~~~~~~~-~~-~~ 146 (346) T protein:vir:10 72 ESAIITKANILLSTC-EVDSRYLSRRDLSS-FVKDYLVFGNAYFEVVRN-RLGQVQRIESPLAKYVRKGLEAGQ-FY-YV 146 (346) T ss_pred chhhhhhhhhHHHHH-hCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEc-CCCcEEEEEEecCCceEEEEcCCe-EE-EE Confidence 111122345666666 48999999999986 678999999999999998 458999999999999998766544 32 33 Q ss_pred EeecCCeEEEEcceeeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CCCCHHHHHHH Q lcl|Aclame:pro 142 TDMLTAKQVKCFAHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQLSGDARQRA 219 (406) Q Consensus 142 ~~~~~g~~~~~~~~~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~~~~ 219 (406) ....+|+.+.|++++|||+|.+. .++++|+||+..+..++.+..++..+..++|+||++|++++..+ ..+++++.+++ T Consensus 147 ~~~~~g~~~~~~~~dIih~r~~~~~~~~~G~~~~~~a~~si~l~~~a~~~~~~~~~NG~~~~~il~~~d~~l~~e~~~~i 226 (346) T protein:vir:10 147 PQRFDHQEHEFAKGSIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQKQEDVENI 226 (346) T ss_pred EEccCCeEEEEecccEEEecCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCHHHHHHH Confidence 44567888999999999999875 47899999999999999999999999999999999999999765 57899999999 Q ss_pred HHHHHHHhcccccCceeecc-----CCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc----ccchhHHHH Q lcl|Aclame:pro 220 RQEFEKMREGSVGGSPLVFD-----STMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN----SPNQSVAQL 290 (406) Q Consensus 220 ~~~~~~~~~g~~~~~~~vl~-----~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~----~~~~n~~~~ 290 (406) +++|++.+++.|.++++++. .|+++++++.+++|+||++++++++++||++|||||.++|.. +++++++++ T Consensus 227 ~~~~~~~~g~~n~~~~~vl~~~~~~~gi~~~pis~~~~d~qf~e~k~~~~~~I~~af~VPp~llG~~~~~~~~~s~~e~~ 306 (346) T protein:vir:10 227 RQQLKQSKGVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSRDDVLAAHRVPPQLMGIIPNNTGGFGNVADA 306 (346) T ss_pred HHHHHHhcCccccCceeEecCCCCccceeEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcccHHHH Confidence 99999988778888888885 478999999999999999999999999999999999999952 357899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhHHHH Q lcl|Aclame:pro 291 MEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNV 337 (406) Q Consensus 291 ~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 337 (406) .+.|++++|.|+++.||+ ++.+|... .++|+...+++.+- T Consensus 307 ~~~f~~~~l~P~~~~iee-~n~~L~~e------~i~F~~~~ll~~~~ 346 (346) T protein:vir:10 307 AEVFFITEIEPLQERLKE-FNQWLGQE------VIKFKPSKLLQRTQ 346 (346) T ss_pred HHHHHHHHHHHHHHHHHH-HHhhcccc------eeeechhhhcccCC Confidence 999999999999999986 66666431 35565443333222 No 91 >protein:vir:267 Length: 348 # NCBI annotation: putative capsid portal protein # Family: family:all:196 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536647;genbank:gi:17975125;genbank:GeneID:929081 Probab=100.00 E-value=5.6e-52 Score=301.55 Aligned_cols=322 Identities=12% Similarity=0.063 Sum_probs=232.4 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccc---eeEEE------ecCCcc----- Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARF---PLVKK------DVNGDI----- 66 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~---~~~~~------~~~~~~----- 66 (406) |.==...+........ . ..++.+ ..+...+..+.++.|+..+.+..... |+... +.+... T Consensus 1 ~~~~~~~~~~~~~~~~-~-~~~~~~----~~p~~~~~~~~~~~~~~~~~~~~~~~~epp~~~~~La~l~~~n~~h~~~i~ 74 (348) T protein:vir:26 1 MTEQLIHSHTTDGTES-K-SVYSFD----PNPEPVDTNSWMTRYCELFYNDFDDYWEPPISLKGLAEIANANGYHGSLLK 74 (348) T ss_pred CCccccchhhccccCC-c-eEEEec----CCCeeecCcchHHHHHHHHhcCCCccccCCCCHHHHHHHHhhhhhhhhhHh Confidence 4410000000000000 0 011110 12344555556666766665443332 32111 100000 Q ss_pred cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecC Q lcl|Aclame:pro 67 IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLT 146 (406) Q Consensus 67 ~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~ 146 (406) ...+.+.. .-+||+.+|+++|++. +.+++++||+|++++|+ ..|++++|+|++|..+++..+ +.. |. ...+ T Consensus 75 ~k~N~l~~--~~~Pn~~~t~~~f~~~-~~d~ll~Gnay~~~~rn-~~G~~~~L~~l~~~~v~~~~d--~~~-~~--~~~~ 145 (348) T protein:vir:26 75 ARANYVAG--RFMNGGGLPMYKMNSA-CWDYFGLGMSAFVKIRS-YLKNVIALEPLPMVHMRKRKN--GDF-VQ--LLRN 145 (348) T ss_pred hhhhHHhh--cccCCCCCCHHHHHHH-HHHHHhcCCeEEEEEEc-CCCcEEEEEEecCceeEeeec--CcE-EE--EEec Confidence 00011111 1369999999999765 67999999999999998 458999999999999887643 332 22 2346 Q ss_pred CeEEEEcceeeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CCCCHHHHHHHHHHHH Q lcl|Aclame:pro 147 AKQVKCFAHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQLSGDARQRARQEFE 224 (406) Q Consensus 147 g~~~~~~~~~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~~~~~~~~~ 224 (406) |..+.|++++|+|+|.+. .++++|+||+.++++++.+..++..+..++|+||++|++++..+ ..+++|+.+++++.|+ T Consensus 146 g~~~~f~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il~~~~~~ls~e~~~~lk~~~~ 225 (348) T protein:vir:26 146 NEQKVFKAKDVIFIPQYDPQQQIYGLPDYLGSIQSSLLNRDATLFRRRYYLNGAHMGFIFYATDPNLSEADEKALKEKIA 225 (348) T ss_pred CeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHHHHHHH Confidence 778899999999999764 57899999999999999999999999999999999999999754 5799999999999999 Q ss_pred HHhcccccCceeec-----cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc----cccchhHHHHHHHHH Q lcl|Aclame:pro 225 KMREGSVGGSPLVF-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV----NSPNQSVAQLMEDYV 295 (406) Q Consensus 225 ~~~~g~~~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~----~~~~~n~~~~~~~~~ 295 (406) +..++.|.++++++ ++|+++++++.+++|+||++.+++++++||++|||||.++|. +++++|++++.+.|+ T Consensus 226 ~~~G~~n~~~~~vl~~~g~~~Gi~~~pis~~~~d~qf~e~k~~t~~dIa~af~VPp~llGi~~~~~~~~sn~e~~~~~f~ 305 (348) T protein:vir:26 226 SSKGIGNFRSMFVNIPNGKEKGIQLIPVGDIATKDEFERIKNITAQDIFVGHRFPAGMGGMLPQQGANVPDPLKVSQVYD 305 (348) T ss_pred HhcCcccccceeEEcCCCCccceeEEEccCChhHHHHHHHHHhhHHHHHHHhCCCHHHccccCCCCCccccHHHHHHHHH Confidence 98766788888888 789999999999999999999999999999999999999995 346789999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchh-HHHHHHH Q lcl|Aclame:pro 296 TNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVT-GRNVDEI 340 (406) Q Consensus 296 ~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~ 340 (406) +++|.|+++.||++||++|....+ +.++|+++... .+...++ T Consensus 306 ~~~l~P~~~~ie~~ln~~l~~~~~---~~~~fdl~~~~e~~~~~a~ 348 (348) T protein:vir:26 306 FYEVIPVCKRFMDAVNNDPEIPDN---LKLKFNLNPGVESANGSAV 348 (348) T ss_pred HHHHHHHHHHHHHHHhhhhCCCCc---cEEEEecCcccccchhhcC Confidence 999999999999999998764433 23445444222 2222222 No 92 >protein:vir:79150 Length: 368 # NCBI annotation: bacteriophage gpQ # Family: family:all:196 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165254;genbank:gi:145708079;genbank:GeneID:5247161 Probab=100.00 E-value=7.9e-52 Score=300.76 Aligned_cols=324 Identities=11% Similarity=0.066 Sum_probs=230.1 Q ss_pred CcccccccCCCC------c------------chhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHh-hccceeEE-- Q lcl|Aclame:pro 1 MSFFQPLGTSKV------S------------YDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGD-IARFPLVK-- 59 (406) Q Consensus 1 M~~f~~~~~~~~------~------------~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~-ia~~~~~~-- 59 (406) |+=-+++..+.. + .......+..|.+. ..+....+..|+..+... ...-|+.. T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~p~------~~~~~~~~~~~~~~~~~~~~~~~pi~~~~ 74 (368) T protein:vir:79 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPV------EVLDRRELLDYVECMRMGQWYEPPMPWDG 74 (368) T ss_pred CCccccccchhccCcccccccccCcchhhccccCceEEEEcCCce------eecchhhHHHHHHHHhccchhccCcCHHH Confidence 664432211100 0 00011111122222 122222222222222211 11111110 Q ss_pred ----Eec----CCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEE Q lcl|Aclame:pro 60 ----KDV----NGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEE 131 (406) Q Consensus 60 ----~~~----~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~ 131 (406) ++. .......|++..++ .+||+++|+++|++ ++.+++++||+|++++++. .|++++|+|++|..+++.. T Consensus 75 la~~~~~~~~h~~~~~~~~n~l~l~-~~Pn~~~t~~~f~~-l~~d~ll~Gnay~~~~r~~-~G~~~~L~~l~~~~v~~~~ 151 (368) T protein:vir:79 75 LARSFRAAAHHSSAVYVKRNILVST-FIPHPLLSRATFER-LVLDWQVFGNAYLERRENV-LGGTIRLDTPLAKYVRRGL 151 (368) T ss_pred HHHHHhhccccchhhhhhcchhhhh-cCCCcCCCHHHHHH-HHHHHhhcCCeEEEEEEcC-CCCEEEEEEeCcccceeec Confidence 010 12233446666555 58999999999975 7899999999999999984 5899999999999988654 Q ss_pred ccCcceEEEEEeecCCeEEEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-C Q lcl|Aclame:pro 132 TDNHEIVYTFTDMLTAKQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-A 209 (406) Q Consensus 132 ~~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~ 209 (406) + +..+++ ...++..+.|++++|+|+|.+ +.+++||+||+.++..++.+..++..+..++|+||++|++++..+ . T Consensus 152 ~--~~~~~~--~~~~~~~~~~~~~dIihir~~~~~~~~yGlsp~~~a~~si~l~~aa~~~~~~~~~NGa~~~gil~~~~~ 227 (368) T protein:vir:79 152 D--LNTYFF--VQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDA 227 (368) T ss_pred c--CCEEEE--EecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCC Confidence 4 333332 235678889999999999975 467899999999999999999999999999999999999999765 5 Q ss_pred CCCHHHHHHHHHHHHHHhcccccCceeec-----cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc--- Q lcl|Aclame:pro 210 QLSGDARQRARQEFEKMREGSVGGSPLVF-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN--- 281 (406) Q Consensus 210 ~~~~e~~~~~~~~~~~~~~g~~~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~--- 281 (406) .+++|+.++++++|++..+..|.++++|+ ++|++|++++.+++|+||++++++++++||++|||||.++|.. T Consensus 228 ~l~~e~~~~lk~~~~~~~G~~N~g~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi~~~~ 307 (368) T protein:vir:79 228 AQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNN 307 (368) T ss_pred CCCHHHHHHHHHHHHHhcCCcccCceeEecCCCCccceeEEEcCCCHHHHHHHHHHHHhHHHHHHHhCCCHHHccccCCC Confidence 79999999999999986666788999988 6799999999999999999999999999999999999999963 Q ss_pred -ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcc----cchhHHHHHHHHHHH Q lcl|Aclame:pro 282 -SPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLV 344 (406) Q Consensus 282 -~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 344 (406) ++++|++++.+.|++++|.|+++.|| +++.+|... .++|+. +.|.+.++....+-. T Consensus 308 t~~~sn~e~~~~~f~~~~l~Pl~~~ie-~ln~~l~~e------~~rF~~~~l~~~D~~a~a~~~~rsa 368 (368) T protein:vir:79 308 TGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGDE------VVRFAPYALGGHDQPAAAPGGQRSA 368 (368) T ss_pred CCccccHHHHHHHHHHHHHHHHHHHHH-HHHhccCcc------eeeechhHhhcccccccCCcccccC Confidence 34789999999999999999999998 577766432 234443 334443333111101 No 93 >protein:vir:4698 Length: 251 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:102 # MgeName: phiPV83 # Cross-refs: genbank:acc:NP_061630;genbank:gi:9635717;genbank:GeneID:1262980 Probab=100.00 E-value=5.1e-52 Score=301.78 Aligned_cols=239 Identities=26% Similarity=0.367 Sum_probs=201.0 Q ss_pred CcccccccCCCC-cchhh---HHHh---hcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHH Q lcl|Aclame:pro 1 MSFFQPLGTSKV-SYDDY---ISSV---LAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDIN 73 (406) Q Consensus 1 M~~f~~~~~~~~-~~~~~---~~~~---~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~ 73 (406) ||||+++.++.. +.... .... +.+.....++...|+++|+||+||++||++||++|+++++. ++....|++. T Consensus 1 MglF~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~iA~lp~~~~~~-~~~~~~~~~~ 79 (251) T protein:vir:46 1 MGIFYKNEKRDLQYNEDDLQMMVQTLPSFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVN-GQINYSDRIV 79 (251) T ss_pred CCccccccccccCCCccchhhhhhhhccccCcCcceechhhhhccHHHHHHHHHHHHhHhhCceEEeeC-ccccccchHH Confidence 999976544322 11111 1111 22334456888999999999999999999999999999875 4555679999 Q ss_pred HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEee---cCCeEE Q lcl|Aclame:pro 74 YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDM---LTAKQV 150 (406) Q Consensus 74 ~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~---~~g~~~ 150 (406) ++|+.+||+.+|+++||+.++.+++++||+|++++|+. .|+|.+|+|++|+.|++..+.+|.+.|.+... ..|..+ T Consensus 80 ~ll~~~Pn~~~t~~~f~~~l~~~lll~Gnay~~i~r~~-~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~~~g~~~ 158 (251) T protein:vir:46 80 NLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDK-TGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGNNIER 158 (251) T ss_pred HHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECC-CCcEEEEEEECCceEEEEECCCCcEEEEEEEeccCCcceeE Confidence 99999999999999999999999999999999999984 48999999999999999999888887766533 356778 Q ss_pred EEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCC-CHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 151 KCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQL-SGDARQRARQEFEKMREG 229 (406) Q Consensus 151 ~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~g 229 (406) .+++++|||||+++.++++|+||+.++..+|..+.++++++.++|+||+.|+++++.++.+ +++++++++++|++.++| T Consensus 159 ~~~~~diiH~r~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~~e~~~~~~~~~~~~~~g 238 (251) T protein:vir:46 159 NVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFPKVLVE 238 (251) T ss_pred EECCccEEEecCcCCCCeeecCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcEEEEeCCCCCCHHHHHHHHHHHHHHhcC Confidence 9999999999998899999999999999999999999999999999999999999998887 466789999999999998 Q ss_pred -cccCceeeccCC Q lcl|Aclame:pro 230 -SVGGSPLVFDST 241 (406) Q Consensus 230 -~~~~~~~vl~~g 241 (406) +|+|++++..+. T Consensus 239 ~~n~g~~~~gm~~ 251 (251) T protein:vir:46 239 LNKLGKLSYSMNQ 251 (251) T ss_pred cccccccccccCC Confidence 577776553332 No 94 >protein:vir:78749 Length: 337 # NCBI annotation: putative portal protein # Family: family:all:196 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285643;genbank:gi:148727149;genbank:GeneID:5220095 Probab=100.00 E-value=9.3e-52 Score=300.36 Aligned_cols=318 Identities=12% Similarity=0.073 Sum_probs=234.7 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhcc---ceeEEEecCCcccccchHHHHhh Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIAR---FPLVKKDVNGDIIHDEDINYLLN 77 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~---~~~~~~~~~~~~~~~~~~~~lL~ 77 (406) |+--+.+.....+... ...+..| .++..+....+..|+...-..+.. -|+.....-+-.........+|. T Consensus 1 m~~~~~~~~~~~~~~~-~~~~~~~------~p~~~~~~~~~~~~~~~~~~~~~~~~~pP~~~~~La~l~~~~~~h~~~L~ 73 (337) T protein:vir:78 1 MTKRQQQPAQAAASSP-RPSVVFS------MPEAIDPTAWMTDYTGVFYNPYGEYYQPPIDRKGLAKVARANAHHGAILM 73 (337) T ss_pred CCCcccCcccccccCc-eeEEEec------CcccccCcchhHhhhhhhhccCcceecCCCCHHHHHHHhhcchhhhhHHH Confidence 5543322211111111 1111112 223334444455555554433332 23322111000011111244677 Q ss_pred hhccccCCHH----HHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEc Q lcl|Aclame:pro 78 VKSTSNASAR----TWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCF 153 (406) Q Consensus 78 ~~Pn~~~~~~----~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~ 153 (406) .+||+.++.+ ++++.++.+++++||+|++++|+. .|+|++|+|++|..+++.. ++..+|. ...+..+.|+ T Consensus 74 ~k~N~~~~~f~~~~~~~~~~~~d~ll~GNay~~~~rn~-~G~~~~L~pl~~~~v~~~~--d~~~~~~---~~~~~~~~~~ 147 (337) T protein:vir:78 74 ARRNMVAGRFTNQRATITAFVHNYLQFGDGGLLKLRNS-FGQVVGLHPLSSVYLRRRE--DGCFVYL---QQGKPNLIYR 147 (337) T ss_pred hhhccccccCcCcHHHHHHHHHHHHhhCCeEEEEEECC-CCcEEEEEEeCCceeEeee--CCeEEEE---EcCCceEEEC Confidence 8999876654 789999999999999999999984 5899999999999988764 3443332 2356778899 Q ss_pred ceeeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CCCCHHHHHHHHHHHHHHhcccc Q lcl|Aclame:pro 154 AHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQLSGDARQRARQEFEKMREGSV 231 (406) Q Consensus 154 ~~~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~g~~ 231 (406) +++|||+|.++ .++++|+||+..++.++.+..++..+..++|+||++|++++..+ ..+++++.+++++.|++..++.| T Consensus 148 ~~eIiHik~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~p~~il~~~~~~l~~e~~~~lk~~~~~~~G~~n 227 (337) T protein:vir:78 148 PDDVIWLAQYDPEQQVYGMPDYLGGLQSALLNQDATLFRRRYFLNGAHMGFIFYATDPNMDDDTEEEMKEMIANSKGVGN 227 (337) T ss_pred CccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeEEcCCCCCCHHHHHHHHHHHHHhcCccc Confidence 99999999765 57899999999999999999999999999999999999999865 47999999999999988665577 Q ss_pred cCceeec-----cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc-----cccchhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 232 GGSPLVF-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV-----NSPNQSVAQLMEDYVTNDLPF 301 (406) Q Consensus 232 ~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~-----~~~~~n~~~~~~~~~~~~i~P 301 (406) .++++++ +.|++|++++.+++|+||++++++++++||++|||||.++|. .++++|+|++.+.|++++|.| T Consensus 228 ~~~~~v~~~~g~~~Gi~~~pis~~~~d~qfle~k~~s~~eIa~a~~VPp~llGi~~~~~~~~~~n~e~~~~~f~~~~L~P 307 (337) T protein:vir:78 228 FRSMFVNIPDGKPDGIKLIPVGDIATKDEFAAIKGITAQDVLTAHRYPPALAGIIPTNGGGGLGDPEKYDATYARNEVLP 307 (337) T ss_pred ccceEEEcCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcccccCCCcCccccHHHHHHHHHHHHHHH Confidence 7888777 578999999999999999999999999999999999999995 235678999999999999999 Q ss_pred HHHHHHHHHHhhccCccchhhhhhhhcccchh Q lcl|Aclame:pro 302 YFDAITSELGLKTLNDKDRRLYHIEFDTRSVT 333 (406) Q Consensus 302 ~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~ 333 (406) +++.||+++++++++.... ..+++.....+ T Consensus 308 ~~~~ie~~~n~~ll~~~~~--~~f~~~~~~~~ 337 (337) T protein:vir:78 308 LCELVQDAINSAGLPRALW--VTFRETIGAAV 337 (337) T ss_pred HHHHHHHHHhhhcCChhhc--eeccccccccC Confidence 9999999999988765432 34555555545 No 95 >protein:vir:103971 Length: 376 # NCBI annotation: pbsx family phage portal protein # Family: family:all:196 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293752;genbank:gi:72537722;genbank:GeneID:3608098 Probab=100.00 E-value=1.8e-50 Score=293.30 Aligned_cols=326 Identities=12% Similarity=0.073 Sum_probs=227.0 Q ss_pred CcccccccCCCCcch--hhHHHhhcCC--cccccchhhhhccHHHHHHHHHHHHh-hccceeEEE------ecCCcc--c Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYD--DYISSVLAGD--VSQKYLGVSALKNSDILTATSIIAGD-IARFPLVKK------DVNGDI--I 67 (406) Q Consensus 1 M~~f~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~a~~~~~v~~~i~~ia~~-ia~~~~~~~------~~~~~~--~ 67 (406) |+--+++.....+.. ........+. .-..-.+..++....+..|+...... .-.-|+... +.+... . T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fg~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~La~~~~~~~~h~s~ 105 (376) T protein:vir:10 26 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA 105 (376) T ss_pred chhccCCCcccchhhhhHhhhccCcceeEEEEcCCceeccCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhHHhhhh Confidence 553332211111100 0000000000 00011222223333333333222211 111121110 000000 0 Q ss_pred ccchHHHHh-hhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecC Q lcl|Aclame:pro 68 HDEDINYLL-NVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLT 146 (406) Q Consensus 68 ~~~~~~~lL-~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~ 146 (406) ..-....+. .-+||+++|+++|++ ++.+++++||+|++++++ ..|++++|+|++|..+++..+.++ | ++.... T Consensus 106 l~~k~n~l~~~~~Pnp~lT~~~f~~-~v~d~ll~Gnay~~~~rn-~~G~~~~L~pl~~~~vr~~~d~~~---~-~~~~~~ 179 (376) T protein:vir:10 106 LFFKANVLASTFRPHRWLSRHAFER-WALDFLTFGNGYLERRRN-MVGGTLRLEPALAKYVRRKADFNG---F-VYVNGW 179 (376) T ss_pred HHHHhHHHHhccCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEC-CCCCEEEEEEeCCcceEEEeeCCe---E-EEEEcC Confidence 000001111 247999999999985 567999999999999998 458999999999999998776543 2 222346 Q ss_pred CeEEEEcceeeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CCCCHHHHHHHHHHHH Q lcl|Aclame:pro 147 AKQVKCFAHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQLSGDARQRARQEFE 224 (406) Q Consensus 147 g~~~~~~~~~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~~~~~~~~~ 224 (406) +..+.|++++|||+|.+. .+++||+||+.++..++.+..++..+..++|+||++|++++..+ ..+++|+.+++++.|+ T Consensus 180 ~~~~~~~~~eViHir~~~~~~~~yGls~~~~a~~si~l~~aa~~f~~~~f~NGa~pggIl~~~d~~l~~e~~~~lr~~~~ 259 (376) T protein:vir:10 180 QERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALK 259 (376) T ss_pred CeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHHHHHHH Confidence 778899999999999764 57899999999999999999999999999999999999999765 5799999999999999 Q ss_pred HHhcccccCceeec-----cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc----ccchhHHHHHHHHH Q lcl|Aclame:pro 225 KMREGSVGGSPLVF-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN----SPNQSVAQLMEDYV 295 (406) Q Consensus 225 ~~~~g~~~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~----~~~~n~~~~~~~~~ 295 (406) +..+..|.++++++ ++|++|++++.+++|+||+|++++++++||++|||||.++|.. ++++|++++.+.|+ T Consensus 260 ~~~G~~N~~~~~vl~~~g~~~Gi~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi~~~~t~~~sn~eq~~~~f~ 339 (376) T protein:vir:10 260 NAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFG 339 (376) T ss_pred HhcCccccCceeEecCCCCccceEEEEccCCHHHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcccHHHHHHHHH Confidence 86555788888887 5699999999999999999999999999999999999999963 34789999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhHHHHHH Q lcl|Aclame:pro 296 TNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVDE 339 (406) Q Consensus 296 ~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (406) +++|.|+++.||+ ++.+|... .++|+...+++.+.++ T Consensus 340 ~~~L~Pl~~~iee-ln~~L~~~------~~~F~~~~Llr~d~ka 376 (376) T protein:vir:10 340 RNEIRPLQARFAE-LNDWLGEE------VVRFDDYEIPPAPVAA 376 (376) T ss_pred HHHHHHHHHHHHH-HHhhcccc------ccccChhHhhcccccC Confidence 9999999999985 77776321 3667666555555554 No 96 >protein:vir:79207 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111036;genbank:gi:134288763;genbank:GeneID:4960726 Probab=100.00 E-value=5.4e-50 Score=290.70 Aligned_cols=321 Identities=11% Similarity=0.078 Sum_probs=226.0 Q ss_pred CcccccccCCCCc--chhhHHHhhcCC--cccccchhhhhccHHHHHHHHHHHHh---------------hccceeEEEe Q lcl|Aclame:pro 1 MSFFQPLGTSKVS--YDDYISSVLAGD--VSQKYLGVSALKNSDILTATSIIAGD---------------IARFPLVKKD 61 (406) Q Consensus 1 M~~f~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~a~~~~~v~~~i~~ia~~---------------ia~~~~~~~~ 61 (406) |+=-+++.....+ ............ .-..-.++.++....+..|+.+.... +-.-+.+- . T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~~~~~h~-~ 79 (351) T protein:vir:79 1 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHS-S 79 (351) T ss_pred CCCCCCCCCCCCCCCCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhHhhh-h Confidence 5533322111100 000000000000 00001122223333333333322221 10001000 0 Q ss_pred cCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEE Q lcl|Aclame:pro 62 VNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTF 141 (406) Q Consensus 62 ~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~ 141 (406) --....+.+.. .-+|||.+|+++|+ .++.+++++||+|++++++ ..|++++|+|++|..+++..+.++ | + T Consensus 80 --~l~~k~n~l~~--~~~Pnp~~t~~~f~-~~v~d~ll~Gnay~~~~r~-~~G~~~~L~~l~~~~v~~~~~~~~---~-~ 149 (351) T protein:vir:79 80 --ALFFKANVLAS--TFRPHRWLSRHAFE-RWALDFLTFGNGYLERRRN-MVGGTLRLEPALAKYVRRKADFSG---F-V 149 (351) T ss_pred --hhhhhhhHHhh--cccCCCCCCHHHHH-HHHHHHHhcCCeEEEEEEC-CCCCEEEEEEeCCcceeeeecCCe---E-E Confidence 00000011111 24799999999996 5778999999999999998 458999999999999998766554 2 2 Q ss_pred EeecCCeEEEEcceeeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CCCCHHHHHHH Q lcl|Aclame:pro 142 TDMLTAKQVKCFAHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQLSGDARQRA 219 (406) Q Consensus 142 ~~~~~g~~~~~~~~~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~~~~ 219 (406) ....++..+.|++++|||+|.+. .+++||+||+.+++.++....++..+..++|+||++|++++..+ ..+++++.+++ T Consensus 150 ~~~~~g~~~~~~~~eIihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~il~~~~~~ls~e~~~~l 229 (351) T protein:vir:79 150 YVNGWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNM 229 (351) T ss_pred EEecCceEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHH Confidence 33456778899999999999764 57899999999999999999999999999999999999999765 57999999999 Q ss_pred HHHHHHHhcccccCceeec-----cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc----ccchhHHHH Q lcl|Aclame:pro 220 RQEFEKMREGSVGGSPLVF-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN----SPNQSVAQL 290 (406) Q Consensus 220 ~~~~~~~~~g~~~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~----~~~~n~~~~ 290 (406) +++|++..+..|.++++++ ++|++|++++.+++|+||++++++++++||++|||||.++|.. ++++|++++ T Consensus 230 k~~~~~~~G~~N~~~~~v~~~~g~~~gi~~~pl~~~~~d~ef~e~k~~s~~eI~~a~~VPp~llGi~~~~t~~~~n~e~~ 309 (351) T protein:vir:79 230 RDALKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTA 309 (351) T ss_pred HHHHHHhcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcccHHHH Confidence 9999986555788888887 5789999999999999999999999999999999999999963 347899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhHHHHHH Q lcl|Aclame:pro 291 MEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVDE 339 (406) Q Consensus 291 ~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (406) .+.|++++|.|+++.||+ ++.+|.. + .++|+...+++.++++ T Consensus 310 ~~~f~~~~l~Pl~~~ie~-ln~~lg~--~----~~~F~~~~llr~d~~a 351 (351) T protein:vir:79 310 ARVFGRNEIRPLQARFAE-LNDWLGD--E----VVTFDDYEIPPAPVAA 351 (351) T ss_pred HHHHHHHHHHHHHHHHHH-HHhhcCc--c----eeeeChhhhccccccC Confidence 999999999999999985 7765522 1 3566655555555544 No 97 >protein:vir:78191 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111155;genbank:gi:134288732;genbank:GeneID:4960651 Probab=100.00 E-value=1.1e-49 Score=289.09 Aligned_cols=321 Identities=11% Similarity=0.085 Sum_probs=225.2 Q ss_pred CcccccccCCCCcc--hhhHHHhhcCCc--ccccchhhhhccHHHHHHHHHHHHh---------------hccceeEEEe Q lcl|Aclame:pro 1 MSFFQPLGTSKVSY--DDYISSVLAGDV--SQKYLGVSALKNSDILTATSIIAGD---------------IARFPLVKKD 61 (406) Q Consensus 1 M~~f~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~a~~~~~v~~~i~~ia~~---------------ia~~~~~~~~ 61 (406) |+=-+++.....+- ............ -..-.++.++....+..|+.+.... .-.-+.+- . T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~~~~~h~-~ 79 (351) T protein:vir:78 1 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHS-S 79 (351) T ss_pred CCCCCCCCCCCCCCCCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhccCceecCCCCHHHHHHHHhhhHhhh-h Confidence 55332221111000 000000000000 0001111222222333333222211 10000000 0 Q ss_pred cCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEE Q lcl|Aclame:pro 62 VNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTF 141 (406) Q Consensus 62 ~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~ 141 (406) --....+.+.. .-+||+.+|+++|+ .++.+++++||+|++++++ ..|++++|+|++|..+++..+.++ |++ T Consensus 80 --~l~~k~n~l~~--~~~Pn~~~t~~~f~-~~~~d~ll~Gnay~~~~rn-~~G~~~~L~pl~~~~v~~~~~~~~---~~~ 150 (351) T protein:vir:78 80 --ALFFKANVLAS--TFRPHRWLSRHAFE-RWALDFLTFGNGYLERRRN-MVGGTLRLEPALAKYVRRKADFSG---FVY 150 (351) T ss_pred --hhhhhhhHHhh--cccCCCCCCHHHHH-HHHHHHHhcCCeEEEEEEC-CCCCEEEEEEecCcceEEeeeCCe---EEE Confidence 00000011111 24799999999996 5668999999999999998 458999999999999998776554 222 Q ss_pred EeecCCeEEEEcceeeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CCCCHHHHHHH Q lcl|Aclame:pro 142 TDMLTAKQVKCFAHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQLSGDARQRA 219 (406) Q Consensus 142 ~~~~~g~~~~~~~~~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~~~~ 219 (406) ....+..+.|++++|||+|.+. .+++||+||+..+..++.+..++..+..++|+||++|++++..+ +.+++++.+++ T Consensus 151 -~~~~~~~~~~~~~eVihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~NGa~pggIl~~~~~~ls~e~~~~l 229 (351) T protein:vir:78 151 -VNGWQERHEFAPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNM 229 (351) T ss_pred -EecCCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHH Confidence 2346778899999999999764 67899999999999999999999999999999999999999865 57999999999 Q ss_pred HHHHHHHhcccccCceeec-----cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc----ccchhHHHH Q lcl|Aclame:pro 220 RQEFEKMREGSVGGSPLVF-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN----SPNQSVAQL 290 (406) Q Consensus 220 ~~~~~~~~~g~~~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~----~~~~n~~~~ 290 (406) +++|++..+..|.++++++ ++|+++++++.+++|+||+|++++++++||++|||||.++|.. ++++|++++ T Consensus 230 r~~~~~~~G~~N~~~~~v~~~~g~~~g~k~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~~t~~~sn~e~~ 309 (351) T protein:vir:78 230 RDALKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTA 309 (351) T ss_pred HHHHHHhcCcccccceeeecCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcccHHHH Confidence 9999986555788888887 4789999999999999999999999999999999999999963 347899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhHHHHHH Q lcl|Aclame:pro 291 MEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVDE 339 (406) Q Consensus 291 ~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (406) .+.|++++|.|+++.||+ ++.+|... +++|+...+++.+.++ T Consensus 310 ~~~f~~~~l~P~~~~iee-~n~~l~~~------~~~F~~~~Llr~d~ka 351 (351) T protein:vir:78 310 ARVFGRNEIRPLQARFAE-LNDWLGDE------VVRFDDYEIPPAPVAA 351 (351) T ss_pred HHHHHHHHHHHHHHHHHH-HHhhcCcc------ceecChhhhccccccC Confidence 999999999999999995 66665321 3677766555555444 No 98 >protein:vir:98567 Length: 340 # NCBI annotation: gp1 # Family: family:all:196 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958056;genbank:gi:41057353;genbank:GeneID:2744238 Probab=100.00 E-value=2.6e-49 Score=286.98 Aligned_cols=315 Identities=13% Similarity=0.099 Sum_probs=220.4 Q ss_pred CcccccccCCCCc--chhhHHHhhcCCcccccchhh------------hhccHHHHHHHHHHHHhhccceeEEEecCCcc Q lcl|Aclame:pro 1 MSFFQPLGTSKVS--YDDYISSVLAGDVSQKYLGVS------------ALKNSDILTATSIIAGDIARFPLVKKDVNGDI 66 (406) Q Consensus 1 M~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 66 (406) |+-=+++...... .......+..|.+.+-.+... ..+.|.-+.+ +|+.+...+.+-- --. T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~---la~l~~a~~~h~s---~i~ 74 (340) T protein:vir:98 1 MSKRKPRKAVAMTASAPQKMEAFTFGEPVPVLDKRDILDYVECISNGKWYEPPVSFSG---LAKSLRSAVHHSS---PIY 74 (340) T ss_pred CCCCCCCccccccccCccceeEEEcCCceeecCcchhhhhhhhhhcCceecCCCCHHH---HHHHHHhccccch---hhh Confidence 7722211111110 001111111111111111100 1111111112 2222222221100 000 Q ss_pred cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecC Q lcl|Aclame:pro 67 IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLT 146 (406) Q Consensus 67 ~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~ 146 (406) ...+.+... -+|||++|+++|+ +++.+++++||+|++++++ ..|++++|+|+++..+++.. ++..+|.+ ..+ T Consensus 75 ~k~n~l~~~--~~Pn~~lt~~~f~-~~~~d~ll~Gnay~~~~rn-~~G~~~~L~pl~~~~vr~~~--~~~~~~~~--~~~ 146 (340) T protein:vir:98 75 VKRNVLAST--YIPHPLLSRQDFS-RFALDYLVFGNAFLEQRHS-VTGQLIKLLTSPAKYTRRGV--DDSVFWFV--ENF 146 (340) T ss_pred hhhhHHhhc--cCCCCCCCHHHHH-HHHHHHHhcCCeEEEEEEC-CCCcEEEEEEeCCceEEEcc--cCcEEEEE--ecC Confidence 001112222 3799999999996 5668999999999999998 45899999999999888744 34444433 457 Q ss_pred CeEEEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CCCCHHHHHHHHHHHH Q lcl|Aclame:pro 147 AKQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQLSGDARQRARQEFE 224 (406) Q Consensus 147 g~~~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~~~~~~~~~ 224 (406) +..+.|++++|+|+|.+ +.++++|+||+..++.++....++..+..++|+||++|++++..+ ..+++++.++++++|+ T Consensus 147 ~~~~~~~~~eViHir~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~pg~il~~~~~~ls~e~~~~lk~~~~ 226 (340) T protein:vir:98 147 TQPHEFAPDTVFHLLEPDINQEIYGLPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDPAQSATDVESLRDAMR 226 (340) T ss_pred CeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHHHHHHHHH Confidence 77889999999999975 467899999999999999999999999999999999999999765 4799999999999999 Q ss_pred HHhcccccCceeec-----cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc----ccchhHHHHHHHHH Q lcl|Aclame:pro 225 KMREGSVGGSPLVF-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN----SPNQSVAQLMEDYV 295 (406) Q Consensus 225 ~~~~g~~~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~----~~~~n~~~~~~~~~ 295 (406) +..+..|.++++++ .+|++|++++.+++|+||++++++++.+||++|||||.++|.. ++++|++++.+.|+ T Consensus 227 ~~~G~~n~~~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~~t~~~sn~e~~~~~f~ 306 (340) T protein:vir:98 227 NSKGLGNFKNLFFYSPNGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMGGKPENIGSLGDVEKVAKVFV 306 (340) T ss_pred HhcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcccCCCCCccccHHHHHHHHH Confidence 86555677888887 5799999999999999999999999999999999999999963 34789999999999 Q ss_pred HHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhHHH Q lcl|Aclame:pro 296 TNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRN 336 (406) Q Consensus 296 ~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 336 (406) +++|.|+++.||+ +|.+|... .++|+...++.++ T Consensus 307 ~~~l~Pl~~~iee-~n~~L~~e------~~rF~~~~l~~~d 340 (340) T protein:vir:98 307 RNELSPLQDRFRE-VNDWLGME------VIRFKEYTLDNPE 340 (340) T ss_pred HHHHHHHHHHHHH-HHhccccc------ccccCccccccCC Confidence 9999999999995 88777432 1344433333322 No 99 >protein:vir:1150 Length: 350 # NCBI annotation: predicted capsid packaging protein # Family: family:all:196 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490599;genbank:gi:17313219;genbank:GeneID:927315 Probab=100.00 E-value=5.1e-50 Score=290.81 Aligned_cols=317 Identities=12% Similarity=0.076 Sum_probs=224.5 Q ss_pred CcccccccCCCCcch-------------hhHHHhhcCCcccccchhhhhccHHHHHHH---------HHHHHhhccceeE Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYD-------------DYISSVLAGDVSQKYLGVSALKNSDILTAT---------SIIAGDIARFPLV 58 (406) Q Consensus 1 M~~f~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i---------~~ia~~ia~~~~~ 58 (406) |+=-+++..+..+.. .....+..|.+..-.+....+....++.|- .-||+.+..-+.+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~y~~~~~~~~~~~pp~~~~~la~~~~~~~~h 80 (350) T protein:vir:11 1 MSKRRSHRRQQPVTVQSAQEGEFIPRQGGRAEAFTFGDPMPVLDGRGILDYLECWPNGRWYEPPLSMEGLAKSVGSSVYL 80 (350) T ss_pred CCccccCCCcCccccCCcchhhhccccccceEEEEeCCceeecCcchhhHHHHHhhcCccccCCCCHHHHHHHHhhhhhh Confidence 665443322111100 001111112221111111111111111111 1122222111111 Q ss_pred EEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceE Q lcl|Aclame:pro 59 KKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIV 138 (406) Q Consensus 59 ~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~ 138 (406) - . --....+.+.. .-+||+++|+++|++ ++.+++++||||++++++. .|++++|+|++|..+++..+. ..+ T Consensus 81 ~-~--~l~~k~n~l~~--~~~Pn~~~t~~~f~~-~v~d~ll~Gnay~~~~rn~-~G~~~~L~~l~~~~vr~~~~~--~~~ 151 (350) T protein:vir:11 81 Q-S--GLKFKRNMLAK--TFIPHRLLSRATFEQ-FSLDWLTFGSAYLEQPRSR-LGTRMPLQAPLAKYMRRGTDL--ETF 151 (350) T ss_pred c-c--chhhhhhhhhh--cccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcC-CCCEEEEEEeCCceeEeeecC--CeE Confidence 0 0 00000111111 247999999999975 6789999999999999985 489999999999999876543 333 Q ss_pred EEEEeecCCeEEEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CCCCHHHH Q lcl|Aclame:pro 139 YTFTDMLTAKQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQLSGDAR 216 (406) Q Consensus 139 ~~~~~~~~g~~~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~ 216 (406) |.+ ...+..+.|++++|||+|.+ +.+++||+||+.+++.++.+..++..+..++|+||++|++++..+ ..+++++. T Consensus 152 ~~~--~~~~~~~~~~~~eVihir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~~~gil~~~~~~ls~e~~ 229 (350) T protein:vir:11 152 YQV--RSWKDEHEFEKGSVIQLREADINQEIYGVPEWFCALQSALLNESATLFRRKYYNNGSHAGFILYMTDAAQNEEDI 229 (350) T ss_pred EEE--eeCCeEEEECcccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHH Confidence 333 45778889999999999975 466899999999999999999999999999999999999999876 57999999 Q ss_pred HHHHHHHHHHhcccccCceeec-----cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc----ccchhH Q lcl|Aclame:pro 217 QRARQEFEKMREGSVGGSPLVF-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN----SPNQSV 287 (406) Q Consensus 217 ~~~~~~~~~~~~g~~~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~----~~~~n~ 287 (406) +++++.|++..++.|+++++++ ..|+++++++.+++|+||+|++++++++||++|||||.++|.. ++++|+ T Consensus 230 ~~l~~~~~~~~G~~N~~~~~v~~~~g~~~g~~~~pl~~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~~t~~~sn~ 309 (350) T protein:vir:11 230 DALRTALKTAKGPGNFRNLFVYAPNGKKEGIQLIPVSEVAAKDEFGSIKNISRDDQLAGLRVYPQLMGVVPQNAGGFGSI 309 (350) T ss_pred HHHHHHHHHhcCccccCceeeecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcCCH Confidence 9999999998766888888887 4689999999999999999999999999999999999999962 447899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccch Q lcl|Aclame:pro 288 AQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSV 332 (406) Q Consensus 288 ~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~ 332 (406) +++.+.|++++|.|+++.||+ ++.+|.... ....+|++.++ T Consensus 310 e~~~~~f~~~~L~P~~~~ie~-ln~~l~~~~---~~F~~~~~~~l 350 (350) T protein:vir:11 310 SDAAAVWASLELAPMQTRLQQ-VNEMIGEEV---VRFAQFDAPGL 350 (350) T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhhcCccc---cccCcccccCC Confidence 999999999999999999995 777775422 11345666655 No 100 >protein:vir:6058 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878199;genbank:gi:33438898;genbank:GeneID:1457733 Probab=100.00 E-value=6.8e-49 Score=284.65 Aligned_cols=305 Identities=16% Similarity=0.155 Sum_probs=218.6 Q ss_pred CcccccccCCCCcch-------hhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHh---------------h-----c Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYD-------DYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGD---------------I-----A 53 (406) Q Consensus 1 M~~f~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~---------------i-----a 53 (406) |+ ++++.+..+.. .....+..|. +...+...+++.|+.+.... + . T Consensus 1 m~--~~~~~~~~~~~~~~~~~~~~~~~~~f~~------p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~a~~~h 72 (344) T protein:vir:60 1 MS--KKKGKTLQPAAKKMTASAPKMEAFTFGE------PVPVLDRRDILDYVECISNGRWYEPPISFTGLAKSLRAAVHH 72 (344) T ss_pred CC--cccCCCCCchHHhhcCCcCcEEEEEcCC------ceeecCCcchhHHHHhhhcCccccCCCCHHHHHHHHHhhhhh Confidence 43 22222111110 0011111111 11122222233333222211 1 0 Q ss_pred cceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEcc Q lcl|Aclame:pro 54 RFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETD 133 (406) Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~ 133 (406) .-+++++ .+.+... -+||+.+|+++| +.++.+++++||+|++++++ ..|+|++|+|++|..+++..+. T Consensus 73 ~~~i~~k--------~n~l~~~--~~Pn~~~t~~~f-~~~~~d~ll~Gnay~~i~rn-~~G~~~~L~~l~~~~vr~~~~~ 140 (344) T protein:vir:60 73 SSPIYVK--------RNILAST--FIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYS-TTGKVIRLETSPAKYTRRGVEE 140 (344) T ss_pred ccchhhh--------hhHHHhh--ccCCCCCCHHHH-HHHHHHHHhcCCeEEEEEEC-CCCcEEEEEEcCcceEEEeecC Confidence 1112111 1122222 379999999999 67889999999999999998 4589999999999999886654 Q ss_pred CcceEEEEEeecCCeEEEEcceeeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CCC Q lcl|Aclame:pro 134 NHEIVYTFTDMLTAKQVKCFAHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQL 211 (406) Q Consensus 134 ~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~ 211 (406) + .+ +.....+..+.|++++|||+|.+. .+++||+||+..+..++.+..++..+..++|+||++|++++..+ ..+ T Consensus 141 ~--~~--~~v~~~~~~~~~~~~eIiHir~~~~~~~~yGlsp~~~a~~si~l~~~a~~~~~~~f~NG~~pg~il~~~~~~l 216 (344) T protein:vir:60 141 D--VY--WWVPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQ 216 (344) T ss_pred C--eE--EEEccCCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCC Confidence 3 22 233556788899999999999764 67899999999999999999999999999999999999999865 579 Q ss_pred CHHHHHHHHHHHHHHhcccccCceeec------cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc---- Q lcl|Aclame:pro 212 SGDARQRARQEFEKMREGSVGGSPLVF------DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN---- 281 (406) Q Consensus 212 ~~e~~~~~~~~~~~~~~g~~~~~~~vl------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~---- 281 (406) ++++.++++++|++.+++ ++++.+++ .+|++|++++.+++|+||+|++++++++||++|||||.++|.. T Consensus 217 s~e~~~~ik~~~~~~~g~-~~~r~~~l~~p~g~~~g~~~~pis~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi~~~~t 295 (344) T protein:vir:60 217 DRNDIEMLRENMVKSKGR-NNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENV 295 (344) T ss_pred CHHHHHHHHHHHHHhcCC-CCCcceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcccCCCC Confidence 999999999999998754 56776666 4799999999999999999999999999999999999999963 Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccch Q lcl|Aclame:pro 282 SPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSV 332 (406) Q Consensus 282 ~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~ 332 (406) +.++|++++.+.|++++|.||++.|| +++.+|.... .++.....+.++- T Consensus 296 ~~~~n~e~~~~~f~~~~L~Pl~~~~e-~ln~~lg~~~-i~F~~~~l~~~d~ 344 (344) T protein:vir:60 296 GSLGDIEKVAKVFVRNELIPLQDRIR-EINGWLGQEV-IRFKNYSLDTDNG 344 (344) T ss_pred CccccHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCcc-cccCccccCCCCC Confidence 24689999999999999999999998 5887774321 1221222223222 No 101 >protein:vir:3780 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536820;genbank:gi:17981829;genbank:GeneID:929208 Probab=100.00 E-value=5.3e-49 Score=285.24 Aligned_cols=323 Identities=12% Similarity=0.062 Sum_probs=224.7 Q ss_pred CcccccccCCCCcch--hhHHHhhcCCcccccchhhhhc-----cHHHHH-H--HHHHHHhhccceeEEEecCCcccccc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYD--DYISSVLAGDVSQKYLGVSALK-----NSDILT-A--TSIIAGDIARFPLVKKDVNGDIIHDE 70 (406) Q Consensus 1 M~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~-----~~~v~~-~--i~~ia~~ia~~~~~~~~~~~~~~~~~ 70 (406) |.-.+.......+.. .....+..+.+.. +.--+.++ +...|. . ...+|+.+-.-+.+- .--....+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~~~~y~~~~~~~~~~~~epp~~~~~la~l~~~~~~h~---~~i~~k~n 76 (345) T protein:vir:37 1 MKTNVKTDNKKGIVIAPINDRTFSLNEISA-SPALDYVGIGFDENYNCYLPPVNRHALAKLPHQNAQHG---GILHSRAN 76 (345) T ss_pred CCCCccccchhhcccCcceeEEeecCCccc-ccchhhhhhhhcCCccccCCCCCHHHHHHHhhcccccc---cceeeech Confidence 544332211100000 0000011111110 00000000 000000 0 012222221111110 00000112 Q ss_pred hHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEE-EEeecCCeE Q lcl|Aclame:pro 71 DINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYT-FTDMLTAKQ 149 (406) Q Consensus 71 ~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~-~~~~~~g~~ 149 (406) -+... -+||+++|+++|++ ++.+++++||+|++++|+. .|++++|+|++|..+++..+.+....+. +.....|.. T Consensus 77 ~l~~~--~~Pn~~lt~~~f~~-~~~d~ll~Gnay~~~~rn~-~G~~~~L~pl~~~~vr~~~d~~~~~~~~~~~~~~~g~~ 152 (345) T protein:vir:37 77 MVSSL--YEGGKALSRMDMRA-LCLNLIQFGDVGLLKVRNG-FGQVVRLVPLSSLYLRVRKDGGYSYLMKKSLYDTAQEI 152 (345) T ss_pred HHHhh--ccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcC-CCcEEEEEEEcCceeEEEEeCCeeEEEEEeEecCCceE Confidence 22222 37999999999975 5689999999999999984 5899999999999998876554432222 223456778 Q ss_pred EEEcceeeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CCCCHHHHHHHHHHHHHHh Q lcl|Aclame:pro 150 VKCFAHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQLSGDARQRARQEFEKMR 227 (406) Q Consensus 150 ~~~~~~~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~ 227 (406) +.|++++|||+|.++ .++++|+||+..+..++.+..++..+..++|+||++|++++..+ ..+++|+.++++++|++.. T Consensus 153 ~~~~~~dVihir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NG~~p~~Il~~~d~~l~~e~~~~lk~~~~~~~ 232 (345) T protein:vir:37 153 YRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTDPDLTEEMEEEIARKISESK 232 (345) T ss_pred EEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEecCCCCCHHHHHHHHHHHHHhc Confidence 899999999999754 67899999999999999999999999999999999999999765 6789999999999999976 Q ss_pred cccccCceeec-----cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc----ccchhHHHHHHHHHHHH Q lcl|Aclame:pro 228 EGSVGGSPLVF-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN----SPNQSVAQLMEDYVTND 298 (406) Q Consensus 228 ~g~~~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~----~~~~n~~~~~~~~~~~~ 298 (406) ++.|.++++++ ++|+++++++.+++|+||+|++++++++||++|||||.++|.. ++++|+|++.+.|++++ T Consensus 233 g~~n~~~~~i~~p~g~~~G~~~~pls~~~~d~qf~e~k~~~~~dIa~a~~VPp~llGi~~~~~~~~~~~e~~~~~f~~~~ 312 (345) T protein:vir:37 233 GVGNFRSMFVNIANGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGGLGDPLKYREVYHYDE 312 (345) T ss_pred CcccccceEEEcCCCcccceEEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCccCCCCCCcccHHHHHHHHHHHH Confidence 66777777776 5799999999999999999999999999999999999999962 35688999999999999 Q ss_pred HHHHHHHHHHHHHhhccCccchhhhhhhhcccchhH Q lcl|Aclame:pro 299 LPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTG 334 (406) Q Consensus 299 i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~ 334 (406) |.|+++.||+++|+.+.. .....++|+...+.+ T Consensus 313 l~P~~~~ie~~ln~~~~~---~~~~~i~F~~~~L~~ 345 (345) T protein:vir:37 313 VMPLQEIIAETINQDPEI---KNLLKIKFREQNFAK 345 (345) T ss_pred HHHHHHHHHHHhhhhccC---CCcceEEecchhhcC Confidence 999999999999974321 122456676655555 No 102 >protein:vir:3743 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043484;genbank:gi:9628619;genbank:GeneID:1261113 Probab=100.00 E-value=2.9e-49 Score=286.70 Aligned_cols=319 Identities=12% Similarity=0.085 Sum_probs=221.9 Q ss_pred CcccccccCCCCcchhh--HHHhhcCCccc----ccc------hhhhhccHHHHHHHHHH--HHhhccceeEEEecCCcc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDY--ISSVLAGDVSQ----KYL------GVSALKNSDILTATSII--AGDIARFPLVKKDVNGDI 66 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~--~~~~~~~~~~~----~~~------~~~a~~~~~v~~~i~~i--a~~ia~~~~~~~~~~~~~ 66 (406) |.-.++.-......... ...+..+.+.. .+. .....+-|.-+..+-.+ ++..-+-+++++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~epp~~~~~la~~~~~~~~h~~~i~~k------ 74 (345) T protein:vir:37 1 MKTNVKTDNKKGIVIAPINDRTFSLSEITASPALDYVGIGFDENYNCYLPPVNRHALAKLPHQNAQHGGILHSR------ 74 (345) T ss_pred CCccccccchhhhcCCCceEEEeecCCcccchhhcccceeeecCCccccCCCCHHHHHHHhhcchhhcchhhhh------ Confidence 44332211100000000 00000000000 000 00001111001111111 000000011111 Q ss_pred cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEE-EEEeec Q lcl|Aclame:pro 67 IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVY-TFTDML 145 (406) Q Consensus 67 ~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~-~~~~~~ 145 (406) .+.+. ..-+||+.+|+++|+ .++.+++++||+|++++|+. .|++++|+|++|..+++..+......+ .+.... T Consensus 75 --~n~l~--~~~~Pn~~~t~~~f~-~~v~d~ll~Gnay~~i~rn~-~G~~~~L~pl~~~~vr~~~d~~~~~~~~~~~~~~ 148 (345) T protein:vir:37 75 --ANMVS--ATYEGGKALSKMEMR-ALCLNLIQFGDVGLLKVRNG-FGQVVRLVPLSSLYLRVHKDGGYSYLMKKSLYDT 148 (345) T ss_pred --hhHHh--hccCCCCCCCHHHHH-HHHHHHHhcCCeEEEEEECC-CCCEEEEEEecCceeEEeecCCeeEEEeeeeecc Confidence 01111 234799999999996 56689999999999999984 589999999999999876544322211 122344 Q ss_pred CCeEEEEcceeeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CCCCHHHHHHHHHHH Q lcl|Aclame:pro 146 TAKQVKCFAHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQLSGDARQRARQEF 223 (406) Q Consensus 146 ~g~~~~~~~~~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~~~~e~~~~~~~~~ 223 (406) .|....|++++|+|||.+. .++++|+||+..++.++.+..++..+..++|+||+.|++++..+ ..+++++.++++++| T Consensus 149 ~g~~~~~~~~eViHir~~~~~~~~~Gl~~~~~a~~si~l~~~a~~~~~~~f~NGa~~~~Il~~t~~~l~~e~~~~lk~~~ 228 (345) T protein:vir:37 149 AQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTDPDLTEEMEEEIARKI 228 (345) T ss_pred CceEEEEccccEEEEcCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHHHHHH Confidence 5778899999999999754 57899999999999999999999999999999999999999754 579999999999999 Q ss_pred HHHhcccccCceeec-----cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc----ccchhHHHHHHHH Q lcl|Aclame:pro 224 EKMREGSVGGSPLVF-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN----SPNQSVAQLMEDY 294 (406) Q Consensus 224 ~~~~~g~~~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~----~~~~n~~~~~~~~ 294 (406) ++.+++.|.+.++++ .+|++|++++.+++|+||++++++++++||++|||||.++|.. ++++|++++.+.| T Consensus 229 ~~~~g~~n~~~~~i~~~~g~~~G~~~~pl~~~~~d~qf~e~k~~~~~dI~~a~~VPp~liGi~~~~t~~~s~~e~~~~~f 308 (345) T protein:vir:37 229 SESKGVGNFRSMFVNIAGGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGGLGDPLKYREVY 308 (345) T ss_pred HHhcCccccCceeEecCCCCccceeEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhccccCCCCCcccHHHHHHHH Confidence 999877776666665 4679999999999999999999999999999999999999963 3478999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhH Q lcl|Aclame:pro 295 VTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTG 334 (406) Q Consensus 295 ~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~ 334 (406) ++++|.|+++.||+++|+.+- ......++|+...+++ T Consensus 309 ~~~~l~P~~~~ie~~ln~~~e---~~~~~~i~F~~~~l~k 345 (345) T protein:vir:37 309 HYDEVMPLQEIIAETINQDPE---IKNLLKIKFREQNFAK 345 (345) T ss_pred HHHHHHHHHHHHHHHhhhhhc---cCCcceEEECchhhcC Confidence 999999999999999997431 1234567887776666 No 103 >protein:vir:5691 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839850;genbank:gi:30065705;genbank:GeneID:1260599 Probab=100.00 E-value=1.1e-48 Score=283.51 Aligned_cols=304 Identities=15% Similarity=0.142 Sum_probs=218.4 Q ss_pred CcccccccCCCCcchh--------hHHHhhcCCcccccchhhhhccHHHHHHHHH---------------HHHhhc---- Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDD--------YISSVLAGDVSQKYLGVSALKNSDILTATSI---------------IAGDIA---- 53 (406) Q Consensus 1 M~~f~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~---------------ia~~ia---- 53 (406) |+ ++++++..... ....+..|. +...+...+++.++.. +|+.+- T Consensus 1 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~a~~~ 71 (344) T protein:vir:56 1 MS---KKKGKTPQPAAKTMTASAPKMEAFTFGE------PVPVLDRRDILDYVECISNGRWYEPPVSFTGLAKSLRAAVH 71 (344) T ss_pred CC---CCCCCCCchhhHHhhcCCCceEEEEcCC------ceeecCcchhhhHHHhhhcCccccCCCCHHHHHHHHhhhhh Confidence 44 33322111100 011111111 1112222222222221 111111 Q ss_pred -cceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEc Q lcl|Aclame:pro 54 -RFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEET 132 (406) Q Consensus 54 -~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~ 132 (406) +-+++.+ .+.+... -+|||++|+++| +.++.+++++||+|++++|+ ..|++++|+|++|..+++..+ T Consensus 72 h~s~i~~k--------~n~l~~~--~~Pnp~~t~~~f-~~~~~d~ll~Gnay~~~~rn-~~G~~~~L~pl~~~~v~~~~~ 139 (344) T protein:vir:56 72 HSSPIYVK--------RNILAST--FIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYS-TTGKVIRLETSPAKYTRRGVE 139 (344) T ss_pred hCccceeh--------hhhHHhh--cCCCCCCCHHHH-HHHHHHHHhcCCeEEEEEEC-CCCcEEEEEEeCCceeEEeec Confidence 1122221 1122222 379999999999 67889999999999999998 458999999999999987654 Q ss_pred cCcceEEEEEeecCCeEEEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CC Q lcl|Aclame:pro 133 DNHEIVYTFTDMLTAKQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQ 210 (406) Q Consensus 133 ~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~ 210 (406) .+ .+|. ....|..+.|++++|||+|.+ +.++++|+||+..++.++.+..++..+..++|+||++|++++..+ .. T Consensus 140 ~~--~~~~--~~~~g~~~~~~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il~~~d~~ 215 (344) T protein:vir:56 140 ED--VYWW--VPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAV 215 (344) T ss_pred CC--EEEE--EecCCeEEEEcCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCC Confidence 33 3332 345678889999999999976 467899999999999999999999999999999999999999765 57 Q ss_pred CCHHHHHHHHHHHHHHhcccccCceeec------cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc--- Q lcl|Aclame:pro 211 LSGDARQRARQEFEKMREGSVGGSPLVF------DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN--- 281 (406) Q Consensus 211 ~~~e~~~~~~~~~~~~~~g~~~~~~~vl------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~--- 281 (406) +++++.++++++|++..+ .++++.+++ .+|+++++++.+++|+||+|++++++++||++|||||.++|.. T Consensus 216 ls~e~~~~lk~~~~~~~g-~~~~r~l~l~~p~g~~~G~~~~pis~~~~d~qf~e~k~~s~~eIa~afrVPp~llGi~~~~ 294 (344) T protein:vir:56 216 QDRNDIEMLRENMVKSKG-RNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPEN 294 (344) T ss_pred CCHHHHHHHHHHHHHhcC-CCCccceEEecCCCCccceeEEEcCCChHHHHHHHHHHhhHHHHHHHhCCCHHHhccCCCC Confidence 999999999999999764 467887777 4799999999999999999999999999999999999999963 Q ss_pred -ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhH Q lcl|Aclame:pro 282 -SPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTG 334 (406) Q Consensus 282 -~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~ 334 (406) ++++|++++.+.|++++|.||++.||+ ++.+|..... ++ ..+++..+.. T Consensus 295 t~~~~n~eq~~~~f~~~tL~Pl~~~ie~-~n~~l~~~~~-~F--~~y~l~~~~~ 344 (344) T protein:vir:56 295 VGSLGDIEKVAKVFVRNELIPLQDRIRE-INGWIGQEVI-RF--KNYSLDTDNG 344 (344) T ss_pred CCccccHHHHHHHHHHHHHHHHHHHHHH-HHhhhccccc-cC--CCccccccCC Confidence 346889999999999999999999995 7777753211 11 1112221111 No 104 >protein:vir:2013 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046757;genbank:gi:9630328;genbank:GeneID:1261529 Probab=100.00 E-value=5.7e-48 Score=279.61 Aligned_cols=303 Identities=15% Similarity=0.130 Sum_probs=216.6 Q ss_pred CcccccccCCCCcch--------hhHHHhhcCCcccccchhhhhccHHHHHHHHH---------------HHHhh----- Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYD--------DYISSVLAGDVSQKYLGVSALKNSDILTATSI---------------IAGDI----- 52 (406) Q Consensus 1 M~~f~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~---------------ia~~i----- 52 (406) |+ ++++++.... .....+..|.+ ...+...+++.++.. +|+.+ T Consensus 1 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~f~~p------~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~a~~~ 71 (344) T protein:vir:20 1 MS---KKKGKTPQPAAKTMTASGPKMEAFTFGEP------VPVLDRRDILDYVECISNGRWYEPPVSFTGLAKSLRAAVH 71 (344) T ss_pred CC---cccCCCCcchhhhhhccCCceEEEEcCCc------eEecCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhhh Confidence 54 3322211100 00111111211 112222212211111 11111 Q ss_pred ccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEc Q lcl|Aclame:pro 53 ARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEET 132 (406) Q Consensus 53 a~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~ 132 (406) .+-+++++ .+.+... -+||+.+|+++| +.++.+++++||||++++++ ..|++++|+|+++..+++..+ T Consensus 72 h~~~i~~k--------~n~l~~~--~~Pn~~lt~~~f-~~~~~d~ll~Gnay~~i~rn-~~G~~~~L~pl~~~~vr~~~~ 139 (344) T protein:vir:20 72 HSSPIYVK--------RNILAST--FIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYS-TTGKVIRLETSPAKYTRRGVE 139 (344) T ss_pred hCccceeh--------hhhHHHh--ccCCCCCCHHHH-HHHHHHHHhcCCeEEEEEEC-CCCcEEEEEEcCCceeEeeec Confidence 11122221 1222222 379999999999 67889999999999999997 448999999999999987654 Q ss_pred cCcceEEEEEeecCCeEEEEcceeeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeec-CC Q lcl|Aclame:pro 133 DNHEIVYTFTDMLTAKQVKCFAHDVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKG-AQ 210 (406) Q Consensus 133 ~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~-~~ 210 (406) .+ .+| .....+..+.|++++|||+|.+. .+++||+||+..+..++.+..++..+..++|+||++|++++..+ .. T Consensus 140 ~~--~~~--~~~~~~~~~~~~~~eIiHir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~p~~Il~~~d~~ 215 (344) T protein:vir:20 140 ED--VYW--WVPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAV 215 (344) T ss_pred CC--EEE--EEccCCeEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcC Confidence 43 322 33557788899999999999765 57899999999999999999999999999999999999999764 57 Q ss_pred CCHHHHHHHHHHHHHHhcccccCceeec------cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc--- Q lcl|Aclame:pro 211 LSGDARQRARQEFEKMREGSVGGSPLVF------DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN--- 281 (406) Q Consensus 211 ~~~e~~~~~~~~~~~~~~g~~~~~~~vl------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~--- 281 (406) +++++.++++++|++.+++ ++++.+++ .+|++|++++.+++|+||+|++++++++||++|||||.++|.. T Consensus 216 l~~e~~~~ik~~~~~~~g~-~n~r~l~l~~p~g~~~gi~~~pis~~~~d~qf~e~k~~s~~eIa~af~VPp~llGi~~~~ 294 (344) T protein:vir:20 216 QDRNDIEMLRENMVKSKGR-NNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPEN 294 (344) T ss_pred CCHHHHHHHHHHHHHhcCC-CCccceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhccCCCC Confidence 9999999999999997754 56776666 4699999999999999999999999999999999999999962 Q ss_pred -ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhh-cccchhH Q lcl|Aclame:pro 282 -SPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEF-DTRSVTG 334 (406) Q Consensus 282 -~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~-~~~~~~~ 334 (406) ++++|++++.+.|++++|.|+++.|| +++.+|.... +.|++ ++..+.+ T Consensus 295 t~~~~n~e~~~~~f~~~~l~P~~~~~e-~in~~lg~~~----i~F~~~~l~~~d~ 344 (344) T protein:vir:20 295 VGSLGDIEKVAKVFVRNELIPLQDRIR-EINGWLGQEV----IRFKNYSLDTDND 344 (344) T ss_pred CCccccHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCcc----cccCccccccCCC Confidence 34788999999999999999999998 5777664321 11221 1221122 No 105 >protein:vir:98853 Length: 219 # NCBI annotation: hypothetical protein # Family: family:all:196 # MgeID: mge:1495 # MgeName: F108 # Cross-refs: genbank:acc:YP_654729;genbank:gi:109302914;genbank:GeneID:4156058 Probab=100.00 E-value=8.9e-43 Score=251.11 Aligned_cols=205 Identities=11% Similarity=0.155 Sum_probs=166.8 Q ss_pred EEEccCcceEEEEEee---cCCeEEEEcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceE Q lcl|Aclame:pro 129 VEETDNHEIVYTFTDM---LTAKQVKCFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGIL 204 (406) Q Consensus 129 ~~~~~~g~~~~~~~~~---~~g~~~~~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~ 204 (406) +....+|.+.|.+... ..|..+++++++|+|+|.+ +.++++|+||+.+++.++..+.++.+++.++|+||++|+++ T Consensus 1 ~r~~~dg~~~y~~~~~~~~~~g~~~~~~~~eilH~r~~~~~~~~~Glspi~~a~~~i~~~~aa~~~~~~~f~Ng~~p~gi 80 (219) T protein:vir:98 1 MRVCKDGNYKYLMKKSLYDTKSEIYEYNKNDVIFIKLYDPMQQVYGSPDYVGGITSALLNSDATIFRRRYYSNGAHMGFI 80 (219) T ss_pred CceeecCeEEEEEecceecCCceeEEeccccEEEecCCCCCCCcceecHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceE Confidence 3444556665554322 3467889999999999976 47899999999999999999999999999999999999999 Q ss_pred Eeec-CCCCHHHHHHHHHHHHHHhcccccCceeec-----cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHh Q lcl|Aclame:pro 205 TMKG-AQLSGDARQRARQEFEKMREGSVGGSPLVF-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKL 278 (406) Q Consensus 205 ~~~~-~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~l 278 (406) +..+ ..+++++++++++.|++.+++.|++.++++ .+|++|++++++++|+||+|++++++.+||++|||||.+| T Consensus 81 l~~~~~~l~~e~~~~~~~~~~~~~g~~n~~~~~l~~~gg~~~G~~~~~~~~~~~d~qfle~rk~~~~eIa~~fgVPp~~l 160 (219) T protein:vir:98 81 LYSTDPDMTEEMEDEIAERIRDSKGVGNFRSMFVNIAGGHPDGLKVIPIGDTGQKDEFANIKNISAQDVLTSHRFPPGLS 160 (219) T ss_pred EEeCCCCCCHHHHHHHHHHHHHhcCcccccceeEecCCCCccceeEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHc Confidence 9765 479999999999999987665666656665 5689999999999999999999999999999999999999 Q ss_pred cc----cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhHHHHH Q lcl|Aclame:pro 279 GV----NSPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVD 338 (406) Q Consensus 279 g~----~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 338 (406) |. +.+++|++++.+.|+++||.||++.||++||++++.+.+. .++|+... .++.. T Consensus 161 G~~~~~~~~~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~~~~~~~~---~~~F~~~~--~~d~~ 219 (219) T protein:vir:98 161 GIIPVNTAGLGDPLKIREAYQADEVLPLQEIIAESINSDYEIKSAL---KVNFKQPE--KRDKN 219 (219) T ss_pred ccccCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCcc---EEeecCcc--cccCC Confidence 85 3468999999999999999999999999999886554332 22332111 11111 No 106 >protein:vir:5249 Length: 437 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852754;genbank:gi:31544029;interpro:IPR006445;uniprot:Q7Y5U6;genbank:GeneID:2753529 Probab=99.91 E-value=1e-24 Score=152.06 Aligned_cols=387 Identities=14% Similarity=0.027 Sum_probs=222.7 Q ss_pred CcccccccCC---CCcchhh-HHHhhcCCccccc-chhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHH Q lcl|Aclame:pro 1 MSFFQPLGTS---KVSYDDY-ISSVLAGDVSQKY-LGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYL 75 (406) Q Consensus 1 M~~f~~~~~~---~~~~~~~-~~~~~~~~~~~~~-~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~l 75 (406) |.+.+.+.+- .-+..+. ...+..+...... ...-+.+++.++++|+.+|+++.+.++.+...+.+...-..+... T Consensus 1 ~~~~D~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~a~Y~~~~l~~~~vd~~a~d~~r~~~~i~~~d~~~~~~~~~~~~ 80 (437) T protein:vir:52 1 MKFFDGIKSLALKLGSKQEQTYYSPSLSLTDDLVQLEALWRDNWIANKVCIKRPEDMVRNWREIYSNDLNSKQLDLFTKF 80 (437) T ss_pred CchhhhhHhHHhcCCCccccceeecCccccccHHHHHHHHHhCchhhHHhhcchHHhhcCCceEecCCCCHHHHHHHHHH Confidence 7765543221 1111110 0001000000000 011234788899999999999999999986433222111112222 Q ss_pred hhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC--------CceeEEEeecCCeeEEEEEcc--------CcceEE Q lcl|Aclame:pro 76 LNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK--------TNQALQFQFYRPSETTVEETD--------NHEIVY 139 (406) Q Consensus 76 L~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~--------~g~~~~l~~l~p~~~~~~~~~--------~g~~~~ 139 (406) +. +- ...+-+..++...-++|.+++++..+.. .|.+..+.+++++.+.+.... .|.+.+ T Consensus 81 ~~-~l----~~~~~l~~a~~~~rl~G~a~i~i~~d~~~~~~pl~~~~~~~~~~v~~~~~v~~~~~~~~dp~s~~fg~p~~ 155 (437) T protein:vir:52 81 ER-SL----KLRETLTKALQWSSLYGSVGLLVVTDSQNTSAPLKPTERLKRLIILPKWKISPTGTKDDDVLSPNFGRYSE 155 (437) T ss_pred HH-hh----cHHHHHHHHHHhcccccceEEEEEecCCCcccccccCCceeEEEEechhhccccccccccccccccCcceE Confidence 21 11 1234444555555589999999988754 378889999999888742221 144433 Q ss_pred EEEeecCCeEEEEcceeeEeeccC----CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEe-ecCCCCHH Q lcl|Aclame:pro 140 TFTDMLTAKQVKCFAHDVIHWKFF----SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTM-KGAQLSGD 214 (406) Q Consensus 140 ~~~~~~~g~~~~~~~~~vih~r~~----~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~-~~~~~~~e 214 (406) +.. ...+..+.+.++.|+||... +.+.++|.|+++.+.+.|............++.+...+.+-+. ..+.++.. T Consensus 156 y~v-~~~~~~~~iH~SRii~~~~~~~~~~~~~~~G~s~le~~~~~i~~~~~~~~~~~~l~~~~~~~v~k~~~l~~~l~~~ 234 (437) T protein:vir:52 156 YSI-LGGSQSITVHHSRLIILNANDAPLSDNDIWGVSDLEKIIDVLKRFDSASVNVGDLIFESKIDIFKIAGLSDKIAAG 234 (437) T ss_pred EEE-ecCCcceeEccceeEEecCccCCCccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHcCCCceecchHHHHhcCC Confidence 333 33445678999999999753 2356789999999999999999999988887766544432221 11223332 Q ss_pred HHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccccc--chhHHHHHH Q lcl|Aclame:pro 215 ARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSP--NQSVAQLME 292 (406) Q Consensus 215 ~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~--~~n~~~~~~ 292 (406) ..+.+.++++....+.+.+++++++.+.+|++++.+..++ .+.......+||++++||..+|.+... .++.++..+ T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~e~~~~~~sgl--~~~l~~~~~~iaaa~~iP~t~L~G~s~~Glasge~D~~ 312 (437) T protein:vir:52 235 MENEVASVISAVQEIKSATNSLLLDAENEYDRKELTFTGL--KDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQ 312 (437) T ss_pred cHHHHHHHHHHHHHhcCCCceEEEcCCcceEEEecCcCCH--HHHHHHHHHHHHHHhcCchhhhcCcCcccccccHHHHH Confidence 3344555555555555567899999999999998776654 466677888999999999988844322 234455555 Q ss_pred HHHH-------HHHHHHHHHHHHHHHhhccCccchhhhhhhhc-c-cch-------hHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 293 DYVT-------NDLPFYFDAITSELGLKTLNDKDRRLYHIEFD-T-RSV-------TGRNVDEIVKLVNNQILTPNQGLV 356 (406) Q Consensus 293 ~~~~-------~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~-~-~~~-------~~~~~~~~~~~~~~g~~t~NE~R~ 356 (406) .|+. ..+.|+++.+-..+-+..+.... ..+.++|+ + ..+ .++.++++..++++|+++++|+|+ T Consensus 313 ~yyd~i~~~Qe~~l~p~le~l~~~i~~~~~g~~~-~~~~~~f~pL~~~s~kekae~~~~~a~a~~~~~~~g~i~~~e~r~ 391 (437) T protein:vir:52 313 NYHEAIRRLQETRLRPIFEIIDPLICNELFGGLP-ADWWFEFVPLTTVKQEQQINMLNTFATAANTLIQNGVLNEYQIAN 391 (437) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcceEEeCCcCCcCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH Confidence 5554 56788888887777665554322 23556664 1 122 234566788899999999999999 Q ss_pred HhC----CCCCCCCCCCeeeeccCccchhhccccccccCcccCCCc--cCCCCCC Q lcl|Aclame:pro 357 ELG----KQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE--VNAEEDK 405 (406) Q Consensus 357 ~~g----~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~--~~~~~~~ 405 (406) +|. ++.++++.-. ..+..........++.+..+ .....+| T Consensus 392 ~L~~~g~~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (437) T protein:vir:52 392 ELRESGLFANISAEHIE---------ELKNADEFAGNFEEPEKMEGAQVQNSEDQ 437 (437) T ss_pred HHHhcCCCCCCCccccc---------cccCCCCCCCccCCCCCCCCCCCCCCCCC Confidence 873 3333221110 00000110011111111111 1112222 No 107 >protein:vir:94049 Length: 532 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453629;genbank:gi:84662665;genbank:GeneID:5142559 Probab=99.87 E-value=2.1e-22 Score=139.40 Aligned_cols=393 Identities=11% Similarity=-0.009 Sum_probs=219.6 Q ss_pred Ccccc---cccCCCCcchhhHHHhhcCCcccccch-hhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHh Q lcl|Aclame:pro 1 MSFFQ---PLGTSKVSYDDYISSVLAGDVSQKYLG-VSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLL 76 (406) Q Consensus 1 M~~f~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL 76 (406) +|.|- -+....... ....+........+.- .-+.+++.++.+|+.+|+++.+-.+++...++.... ......| T Consensus 55 ~~~~a~~~g~~~~~~~~--~~~~~~~~~~~~~~~l~a~Y~~~~l~r~~Vd~~aed~~r~~~~i~~~~~~~~~-~~~~~~i 131 (532) T protein:vir:94 55 QNAMAMDYGLQTGRNGR--NALSFVEATSWPGFPTLALLAQLPEYRTMHETPADECVRAWGKITCSSKDELA-ADKATRI 131 (532) T ss_pred ccccccccccCcccccc--cccccccccccchHHHHHHHHcCchhhhhhccchHHHhhCCceEeeCCccccc-hHHHHHH Confidence 11111 000000000 0000110000011111 122468889999999999999999988654443322 2233333 Q ss_pred hhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC------------------CceeEEEeecCCeeEEEEEccC---- Q lcl|Aclame:pro 77 NVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK------------------TNQALQFQFYRPSETTVEETDN---- 134 (406) Q Consensus 77 ~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~------------------~g~~~~l~~l~p~~~~~~~~~~---- 134 (406) ...-..+. ..+-+..++....++|.+++++..+.. .|.+..+.+++|+++.+..... T Consensus 132 ~~~~~~l~-v~~~l~~a~~~~rlyG~a~i~i~v~~~~~~~~~~~p~~l~~~~I~~g~~~~l~vld~~~v~p~~~~~~dp~ 210 (532) T protein:vir:94 132 TQKLEQYN-VRTLVRTVVIHDQAYGGAHVFPHLKMDGDSVPADAPLLLSPSFVQRGCLIGFATIEPMWLSPNAYNATDPT 210 (532) T ss_pred HHHHHhhh-HHHHHHHHHHhhhcccceEEEEEeccCCccccccccccccccccccceeeEEEeechheeccccccccccc Confidence 32222232 234444455555588999988765321 2345678889998887643221 Q ss_pred ----cceEEEEEeecCCeEEEEcceeeEeeccCC-------CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcce Q lcl|Aclame:pro 135 ----HEIVYTFTDMLTAKQVKCFAHDVIHWKFFS-------HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGI 203 (406) Q Consensus 135 ----g~~~~~~~~~~~g~~~~~~~~~vih~r~~~-------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ 203 (406) |.+.++.. ..| ..+.++.|+||...+ ..+++|.|.++.+...|............+......... T Consensus 211 sp~fg~P~~y~v--~~g--~~iH~SRli~f~g~~~p~~~~~~~~~~G~Svlq~~~~~l~~~~~t~~~~~~l~~~~~~~v~ 286 (532) T protein:vir:94 211 LPSFYKPDSWIA--TSG--KKIHSSRIHTVVGRPVGDMLKAAYSFRGVSISQLAMPYVDNWLRTRQSVSDTVKQFSMTNL 286 (532) T ss_pred ccccCCceeEEE--ccC--eeeccceEEEecCCCchhhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCcee Confidence 23333322 223 367899999997543 234579999999999999999988888887666444433 Q ss_pred EEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccC-CceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHh-ccc Q lcl|Aclame:pro 204 LTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDS-TMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKL-GVN 281 (406) Q Consensus 204 ~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~-g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g~~ 281 (406) .+.....++++..+.+.+++.....+..+.+++++++ +.+|++++.+..++ .+........||.+.+||..+| |.+ T Consensus 287 k~~~a~~ls~~~~~~~~~r~~~~~~~~~n~g~~~id~~~e~~e~~~~~lsgl--~~~l~~~~~~iAaa~~IP~t~LfG~s 364 (532) T protein:vir:94 287 ATDMAQLLAPGGAQSLDARLQLFNLYRDNRNIGALDKGTEEIQQTNTPLSGL--DSLQAQSQEQMAAVSHIPLVKLLGIT 364 (532) T ss_pred eechHHhhcchhHHHHHHHHHHHHhhcCCccceEEcCCCceeEEEecccCCH--HHHHHHHHHHHHhHhCCCeeeeecCC Confidence 3333345566777888888887766544556777875 57888887666653 5567777889999999999976 533 Q ss_pred ccc--hhHHHHHHHHHH-------HHHHHHHHHHHHHHHhhccCccchhhhhhhhcc--cchh-------HHHHHHHHHH Q lcl|Aclame:pro 282 SPN--QSVAQLMEDYVT-------NDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT--RSVT-------GRNVDEIVKL 343 (406) Q Consensus 282 ~~~--~n~~~~~~~~~~-------~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~ 343 (406) ..+ ++.+.....|+. ..+.|+++.+-+.|-+..+...+ ..+.++|+. ..+. ++.++++..+ T Consensus 365 p~GlnstGe~D~~~yyd~I~s~Qe~~l~p~le~l~~~l~~s~~g~~~-~d~~~~f~pL~~~s~kEkAei~~~~a~a~~~~ 443 (532) T protein:vir:94 365 PNGLNASSDGEIRVWYDFIAGYQATNLTPLMEWIIDLIQLSEYGQID-PGLAWEWSPLMELDDKELAEVRQLNASTDSTL 443 (532) T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCceEEeCCCCCCCHHHHHHHHHHHHHHHHHH Confidence 222 222333444443 56789988888888766654332 235566641 1222 2345667789 Q ss_pred HhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccc-hh-hcccc-----ccccC-----cccCCCccCCCCCCC Q lcl|Aclame:pro 344 VNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVF-LD-KKEEY-----QDKVG-----IKGKGGEVNAEEDKS 406 (406) Q Consensus 344 ~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~-~~-~~~~~-----~~~~~-----~~~~gg~~~~~~~~~ 406 (406) +++|++++||+|+.++.+|..+ .+.......... .+ ...+. ....+ .+..+++.+..+.++ T Consensus 444 ~~~Gvi~~~Evr~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 516 (532) T protein:vir:94 444 MELGVIDAKMVQQRLAADPTSG--YAGALGERDELDDVEEIAKQLMAAALNPPATAPQTPNPQPDSEDDQTDNQP 516 (532) T ss_pred HhcCCCCHHHHHHHHhcCCccc--cccccccccccccccchhhhhcccccCCCCCCCCCCCCCCCCCCCCCCCcc Confidence 9999999999999999998743 222211111100 00 00000 00000 011111112222222 No 108 >protein:vir:107742 Length: 537 # NCBI annotation: gp28 # Family: family:all:297 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024875;genbank:gi:48697517;genbank:GeneID:2948359 Probab=99.86 E-value=4.1e-22 Score=137.83 Aligned_cols=389 Identities=10% Similarity=-0.014 Sum_probs=209.6 Q ss_pred CcccccccC-----CCCcchhhHHHhh--cCC----------cccccch----hhhhccHHHHHHHHHHHHhhccceeEE Q lcl|Aclame:pro 1 MSFFQPLGT-----SKVSYDDYISSVL--AGD----------VSQKYLG----VSALKNSDILTATSIIAGDIARFPLVK 59 (406) Q Consensus 1 M~~f~~~~~-----~~~~~~~~~~~~~--~~~----------~~~~~~~----~~a~~~~~v~~~i~~ia~~ia~~~~~~ 59 (406) +.......+ ..++.......+. .+. ....+.. .-+.+++.+..+|+.+|+++.+-++++ T Consensus 55 ~~~~~~~~~~~~~~a~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~Y~~~~l~r~iVd~~A~d~~r~~~~i 134 (537) T protein:vir:10 55 IAMMPKVDGSHPDMAMDGLDVEGGTFSAYANPNLSEGLVLWYAQQAFIGHQMCALIATHWLVNKACSQMPRDAMRKGYKI 134 (537) T ss_pred CcccccccccccchhccccccchhhhhhhccccccchhhhhccccCCccHHHHHHHHhCchhhhhhhhhhHHhhcCCcee Confidence 222211110 0000000000000 000 0000111 112468889999999999999999988 Q ss_pred EecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC---------------ceeEEEeecCC Q lcl|Aclame:pro 60 KDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKT---------------NQALQFQFYRP 124 (406) Q Consensus 60 ~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~---------------g~~~~l~~l~p 124 (406) ...+++.... .....|....+.+..+..|.+.+.+.. ++|.+++++..+..+ |....+.+++| T Consensus 135 ~~~~~~~~~~-~~~~~l~~~~~~l~~~~~l~~a~~~~r-lyG~~~i~i~v~~~D~~~~~~Pl~~~~i~kg~~k~l~vidp 212 (537) T protein:vir:10 135 ISDDGNELDP-KDAKFIDRYDRAFNIKKHAIQFVRKGR-IFGIRIALFKVDSPDPYYYEKPFNIDGVMPGAYKGIVQIDP 212 (537) T ss_pred ecCCcccccH-HHHHHHHHHHHHhhHHHHHHHHHHhcc-cccceEEEEeecCcCCcccccccccccccccceeEEEEech Confidence 6554433222 223334434444444444555444444 679999887653322 23456777888 Q ss_pred eeEEEEEc----------cCcceEEEEEeecCCeEEEEcceeeEeeccCC-------CCCccccCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 125 SETTVEET----------DNHEIVYTFTDMLTAKQVKCFAHDVIHWKFFS-------HDTILGRSPLLSLGDEIDLQTGG 187 (406) Q Consensus 125 ~~~~~~~~----------~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~-------~~~~~G~s~~~~~~~~i~~~~~~ 187 (406) .++.+... +.|.+.++.. .| ..+.++.|+||...+ ..++.|.|.++.+...|...... T Consensus 213 ~~~~~~~~~~~~~dp~sp~fg~P~~y~v---~g--~~iH~SRli~f~g~~~p~~~~~~~~~~G~Svlq~~~~~l~~~~~t 287 (537) T protein:vir:10 213 YWCAPLLDAQASSNPVSMHFYEPTYWLI---NG--KKYHRSHLAIYINDEVVDFLKPSYIYGGVPLPQQIMERVYAAERT 287 (537) T ss_pred hhcccccchhhhccCCccccCCceeeee---cC--eEecceeEEEecCCCCchhhhcccCcccccHHHHHHHHHHHHHHH Confidence 77765321 1133322221 23 467899999997542 23567999999999999999998 Q ss_pred HHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccC-CceeeeccCChhHHHHHHHHHHHHHH Q lcl|Aclame:pro 188 INTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDS-TMEYTPLEIDTNVLQLITSNNFSTAQ 266 (406) Q Consensus 188 ~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~-g~~~~~l~~~~~d~~~~e~~~~~~~~ 266 (406) ......++.......+.+.....++.+ +.+.+++.....+.++.++++++. +.+|+.++.+...+ .+........ T Consensus 288 ~~~~~~l~~~~~~~v~k~~~~~~l~~~--~~~~~r~~~~~~~r~n~g~~~id~e~e~~e~~~~~lsgl--~~~l~~~~~~ 363 (537) T protein:vir:10 288 ANEGPMLAMTKRQTVLKVDAAQVLANK--QQFDETMSWWTATRDNYQVRVVDKDNEDVVQIDTTLNDL--DKVIMNQYQL 363 (537) T ss_pred HHHHHHHHHhcCCceeeechHHhhcCH--HHHHHHHHHHHhhcCCcceeEecCCCceeEEEeccCCCH--HHHHHHHHHH Confidence 888888876655554333322333322 234444444444444456777776 58898887666654 4566777788 Q ss_pred HHHHhcCCHHHh-ccccc--chhHHHHHHHHHH------HHHHHHHHHHHHHHHhhccCccchhhhhhhhcc--cchhH- Q lcl|Aclame:pro 267 IAKALRVPSYKL-GVNSP--NQSVAQLMEDYVT------NDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT--RSVTG- 334 (406) Q Consensus 267 Ia~~fgvpp~~l-g~~~~--~~n~~~~~~~~~~------~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~--~~~~~- 334 (406) ||.+.|||..+| |.+.. +++.+...+.|+. ..|.|.++.+.+.+-+..+... ..+.++|.. ..+.+ T Consensus 364 iAa~~~IP~t~L~G~sp~GlnatGe~D~~~yyd~I~~~Qe~l~p~l~~l~~ll~~~~~~~~--~~~~i~f~pL~~~s~kE 441 (537) T protein:vir:10 364 VCAIARTPAPKMLGTVPTGFNSTGDYEEASYHEECESTQDDMRPLIDRHHQLVCRSHLRKR--IRVKVEFPPMDAPKESE 441 (537) T ss_pred HHhhhCCCceeeccCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--cceEEEeCCCCCCCHHH Confidence 999999999965 54322 2333444444442 2478999988888877666532 235555541 22222 Q ss_pred ------HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCC------- Q lcl|Aclame:pro 335 ------RNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNA------- 401 (406) Q Consensus 335 ------~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~------- 401 (406) +.++++..++++|++++||+|+.|+.+|..+. +.+....+....+... .+....+.++.++.. T Consensus 442 kAei~~~~a~a~~~~~~~G~i~~~Evr~~L~~~~~~g~--~~l~~~~~~ed~e~~~--~~~~~~~~~~~~~~~~~~~~~~ 517 (537) T protein:vir:10 442 RADTFLKKMQAAKLAFEMGAVDGVDVNEYLRMDPTLGF--TSITPAMRPTDAEDID--VDDEGKPVRIIEDQPAPSEMFG 517 (537) T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhccCcccc--ccccCCCChhhhhccc--CCccCCcCCCCCCCCCccccCC Confidence 34566888999999999999999998875321 1121111111011000 000000001000000 Q ss_pred --CCCCC Q lcl|Aclame:pro 402 --EEDKS 406 (406) Q Consensus 402 --~~~~~ 406 (406) .++++ T Consensus 518 ~~~~~~~ 524 (537) T protein:vir:10 518 ATSSGES 524 (537) T ss_pred CCccccc Confidence 00000 No 109 >protein:vir:99563 Length: 862 # NCBI annotation: minor head protein-like protein # Family: family:all:297 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039808;genbank:gi:126011058;genbank:GeneID:4818258 Probab=99.83 E-value=1.3e-20 Score=129.70 Aligned_cols=393 Identities=11% Similarity=-0.010 Sum_probs=208.0 Q ss_pred Ccccc---cccCCCC----cchhhHHHhhcCCccccc-chhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchH Q lcl|Aclame:pro 1 MSFFQ---PLGTSKV----SYDDYISSVLAGDVSQKY-LGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDI 72 (406) Q Consensus 1 M~~f~---~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~ 72 (406) +|+-+ ..+...+ ........++.......+ ...-+.+++.+..+|+.+|+++.+-.+++...+......... T Consensus 101 Dgl~n~~~~lG~~~~~s~y~~~~~~~~~~~~~~f~gyql~alY~~~~larkiVd~pAeDatR~g~~I~~~~d~~e~~~e~ 180 (862) T protein:vir:99 101 DDGGGAPVPIGAEGKQSSYAVPEALQDWYLSQGFIGHQACALIAQHWLVDKACSLAGEDAIRNGWHLKSLGEGEEIDEES 180 (862) T ss_pred hcchhhhhhccccccccccccchhccccccccCcccHHHHHHHHhCchhhhhhhhhhHHHhhCCceEeecCcccccCHHH Confidence 11111 1111111 111111111111111111 111234788889999999999999999887432211111122 Q ss_pred HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC---------------ceeEEEeecCCeeEEEEE----c- Q lcl|Aclame:pro 73 NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKT---------------NQALQFQFYRPSETTVEE----T- 132 (406) Q Consensus 73 ~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~---------------g~~~~l~~l~p~~~~~~~----~- 132 (406) ...|...-..+.- .+-+..++...-++|.+++++..+..+ |.+..+..++|.++.+.. . T Consensus 181 ~~~ie~~~~rL~v-~~~l~eair~~RLyGga~ililv~~~D~~~LsqPLn~e~I~kG~lkgl~vlDp~w~~p~~v~~~~~ 259 (862) T protein:vir:99 181 LEKFKAIDVEFKV-KENLIEFNRFKNVFGIRVAIFVVDSEDPDYYEKPFNPDGITPGSYRGISQIDPYWMMPMLTAESTA 259 (862) T ss_pred HHHHHHHHHHhhH-HHHHHHHHHhcccccceEEEEEecCcCchhhhcCcCcccccccceeEEEEechhhhcccccccccc Confidence 2222222222222 233444444444788888776543222 345677778877665421 1 Q ss_pred cC-----cceEEEEEeecCCeEEEEcceeeEeeccCC-------CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCC Q lcl|Aclame:pro 133 DN-----HEIVYTFTDMLTAKQVKCFAHDVIHWKFFS-------HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFS 200 (406) Q Consensus 133 ~~-----g~~~~~~~~~~~g~~~~~~~~~vih~r~~~-------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~ 200 (406) +. |.+.++. ..| ..+.++.|+||...+ ...+.|+|.++.+...|.....+......++.+... T Consensus 260 Dp~sp~yGkP~~y~---I~g--~~IH~SRliif~g~~vpd~lk~ay~f~G~SvLe~iyd~L~~~d~t~~saa~Ll~ka~l 334 (862) T protein:vir:99 260 DPSSQFFYEPEFWI---ISG--QKYHRSHLIIARGPQPADILKPTYIFGGIPLVQRIYERVYAAERTANEAPLLAMNKRT 334 (862) T ss_pred cccccccCCceeee---ecC--eeeccceeEEecCCCchhhhhccCCccCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc Confidence 11 2222221 223 357788888887532 234579999999999999999999999988877554 Q ss_pred cceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHh-c Q lcl|Aclame:pro 201 SGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKL-G 279 (406) Q Consensus 201 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g 279 (406) ..+-+..-..+..+ +.+.+++.....+.++.++++++.+-+|+.++.+...+ .+........||++.+||..+| | T Consensus 335 ~v~ktd~l~~l~~e--d~l~~r~~~~~~~rdN~Gi~liD~eEe~e~ls~slSGL--~dll~~~~q~IAaas~IP~tiLfG 410 (862) T protein:vir:99 335 TAIHTDTAKAIANE--DKFIQRLMFWVRYRDNHAVKVLGTDETMEQFDTSLADF--DAVIMGQYQLVASIAKTPATKLLG 410 (862) T ss_pred ceeechhHhhhccH--HHHHHHHHHHHhccCcceeEEecCCCceeEEecccCCh--HHHHHHHHHHHHhhhCCCceeecc Confidence 43333222233322 34555555555544456689999999999888776654 4556666778999999999965 5 Q ss_pred cc--ccchhHHHHHHHHHH-------HHHHHHHHHHHHHHHhhccCccchhhhhhhhc-c-cchh-------HHHHHHHH Q lcl|Aclame:pro 280 VN--SPNQSVAQLMEDYVT-------NDLPFYFDAITSELGLKTLNDKDRRLYHIEFD-T-RSVT-------GRNVDEIV 341 (406) Q Consensus 280 ~~--~~~~n~~~~~~~~~~-------~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~-~-~~~~-------~~~~~~~~ 341 (406) .+ +.+++.+...+.||. .-|.|+++.+...+...+..+ ..+.++|. + ..+. ++.++++. T Consensus 411 qspaGlnATGE~D~~nYyD~I~s~QE~~L~P~LerL~~li~~~lg~~---~d~~ieFnpL~~~sekEkAEi~kk~Aea~~ 487 (862) T protein:vir:99 411 TAPKGFNSTGEFETISYHEELESIQEHVYMPFLQRHYLISRLSLGIQ---HEIDVVMEPVASMTAQQQADLNKTKAEGGK 487 (862) T ss_pred cCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CcceEEeCCCCCCCHHHHHHHHHHHHHHHH Confidence 43 223444545555553 568899999988776555322 23555553 1 1122 23456678 Q ss_pred HHHhCCCcCHHHHHHHh------CCCCCCCCCCC--eeeeccCccchhhccccccc-----------------------c Q lcl|Aclame:pro 342 KLVNNQILTPNQGLVEL------GKQKSTDPNMD--RYQSSLNYVFLDKKEEYQDK-----------------------V 390 (406) Q Consensus 342 ~~~~~g~~t~NE~R~~~------g~~p~~~~~gd--~~~~~~n~~~~~~~~~~~~~-----------------------~ 390 (406) .++++|+++++|+|++| |++.++++... ....+.+............. . T Consensus 488 ~lv~sGvispdEvR~~L~~~~~~g~~~l~ded~E~d~~~~~e~~~~~e~~g~a~~~ap~de~~aga~~~~~e~d~~~~p~ 567 (862) T protein:vir:99 488 VLIDGGVISPDEERNRIRDDKRSGYNRLTKEDAEETPGASPENLAAYQKAGAAQETASAKETQAGAAVTTAEGDQPNVQM 567 (862) T ss_pred HHHhcCCCCHHHHHHHHHhcCCcCCCCCCcccccccCCCCcccccccccCCcccccccccccccccCCccccCCcccccc Confidence 89999999999999976 45544432211 11112222211111000000 0 Q ss_pred CcccCCCccCCCCCCC Q lcl|Aclame:pro 391 GIKGKGGEVNAEEDKS 406 (406) Q Consensus 391 ~~~~~gg~~~~~~~~~ 406 (406) ....++|....+.+.. T Consensus 568 ~~~~~~g~~~~~t~~~ 583 (862) T protein:vir:99 568 VPSMKPGQMVGPEVGI 583 (862) T ss_pred cCCCCCCCcccccccc Confidence 0011111111111111 No 110 >protein:vir:103860 Length: 528 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1522 # MgeName: D3112 # Cross-refs: genbank:acc:NP_938234;genbank:gi:38229139;genbank:GeneID:2648175 Probab=99.83 E-value=4.7e-19 Score=121.09 Aligned_cols=390 Identities=10% Similarity=-0.017 Sum_probs=233.3 Q ss_pred Ccc-cccccC----C----CCc-chhhHHHhhcCCcccccchhh----------------------hh-ccHHHHHHHHH Q lcl|Aclame:pro 1 MSF-FQPLGT----S----KVS-YDDYISSVLAGDVSQKYLGVS----------------------AL-KNSDILTATSI 47 (406) Q Consensus 1 M~~-f~~~~~----~----~~~-~~~~~~~~~~~~~~~~~~~~~----------------------a~-~~~~v~~~i~~ 47 (406) |+- ++..++ . +.+ .-..+...+.+.++..+++.. .+ +.+.|.+|++. T Consensus 1 ~~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~il~~a~~gd~~~~~~L~~~m~e~D~~i~s~l~~ 80 (528) T protein:vir:10 1 MAAIVDIYGNPLRTQQLRKQQTAHLAGLAKEFANHPAKGLTPAKLAHILIEAEQGHLQAQAELFMDMEERDAHLFAEMSK 80 (528) T ss_pred CCeeECCCCCccccccccchhhhhhhhhhhhhcccCCCCCCHHHHHHHHHhhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 763 322111 0 110 001111122222233333311 11 57889999999 Q ss_pred HHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc--eeEEEeecCCe Q lcl|Aclame:pro 48 IAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN--QALQFQFYRPS 125 (406) Q Consensus 48 ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g--~~~~l~~l~p~ 125 (406) +...|.+++|.|...++........+..++..-+....+.+++..++ +.+.+|-++.++++...+| .|..+.+.++. T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~~f~~~i~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~~~~r~~~ 159 (528) T protein:vir:10 81 RKRAVLGLDWTIEPPRNASAAEKADAEYLHELLLDLEGIEDLMLDCM-DGVGHGYSAIELDWSLQGREWLPQAFDHRPQS 159 (528) T ss_pred HHHHHhcCCceEecCCCCCHHHHHHHHHHHHHHhCCccHHHHHHHHH-hhhhhcceeEEEEEeecCCceeEEEeeeeccc Confidence 99999999999986554433333444444322222222344444443 4557999999998876555 46678888888 Q ss_pred eEEEEEccCcceEEEEEeecCCeEEEEcceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceE Q lcl|Aclame:pro 126 ETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGIL 204 (406) Q Consensus 126 ~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~ 204 (406) ++.+.. +++..+.... .......+++...+..++.... .++|.+.+..|.-..-......+.-..|.+.-|.|-.+ T Consensus 160 ~f~~~~--~~~~~l~~~~-~~~~g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~yG~P~~i 236 (528) T protein:vir:10 160 WFQLNP--DDQDELRLRD-NSIAGEVLQPFGWIMHKPRSRSGYVARSGLFRVLAWPYLFKHYSTADLAEMLEIYGLPIRL 236 (528) T ss_pred ceeecc--CCCcEEeccC-CCCCceeecCCCeEEEeecCCCCCccccchHHHHHHHHHHHHhhHHHHHHHHHHcCCCeEE Confidence 777643 3333333322 2223456677666555665544 47899999999999999999999999999999999888 Q ss_pred EeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCC-hhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc- Q lcl|Aclame:pro 205 TMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEID-TNVLQLITSNNFSTAQIAKALRVPSYKLGVNS- 282 (406) Q Consensus 205 ~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~-~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~- 282 (406) .+++...++++++++.+.+.++.+ ++ .++++.|++++-+..+ ..-..|.+..++..++|+++. ||.+. T Consensus 237 gky~~~a~~~ek~~L~~al~~i~~--~~--~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i------LGqtlT 306 (528) T protein:vir:10 237 GKYPPGTPDEEKVTLLRAVTGLGH--AA--AGIIPESMSIDFQEASKGSAEPFMAMMRWCDDSMSKAI------LGGTLT 306 (528) T ss_pred EecCCCCCHHHHHHHHHHHHHHhh--Cc--EEEecCCceeEEeecCCCChhHHHHHHHHHHHHHHHHH------hhhhhh Confidence 888888899999999988877754 22 4667777777666542 223347788889999998654 44211 Q ss_pred -------cchhH-HHHHHHHHHHHHHHHHHHHHHHHHhhccCccc----------hhhhhhhhc--ccchhHHHHHHHHH Q lcl|Aclame:pro 283 -------PNQSV-AQLMEDYVTNDLPFYFDAITSELGLKTLNDKD----------RRLYHIEFD--TRSVTGRNVDEIVK 342 (406) Q Consensus 283 -------~~~n~-~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~ 342 (406) .+++. .+-........+.-.++.|++.||+.|+.+.- ...-.+.|+ ...|+++.++.+.+ T Consensus 307 s~~~~g~~gS~Alg~vh~~v~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~~~~~e~eDl~~~a~~~~~ 386 (528) T protein:vir:10 307 SQTSESGGGAYALGQVHNEVRHDLLAADARQLAATLSRDLLWPLLVLNRSGNLDARRAPRLVFDLKDRADLAAMATSLPP 386 (528) T ss_pred ccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEecCCCcccHHHHHHHHHH Confidence 12222 23345566778888999999999987744210 111233443 35577888999999 Q ss_pred HHhCCC-cCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 343 LVNNQI-LTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 343 ~~~~g~-~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) +++.|+ ++..++|+.+|+|.- ..++.+..+....+........................++. T Consensus 387 L~~~G~~i~~~~i~e~~gip~p--~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (528) T protein:vir:10 387 LVKLGVQVPVNWVQEQLGIPLP--ANGEAVLGDQAGAGIAQLSRRPGPRIAALAQVIGPRYRDQE 449 (528) T ss_pred HHhCCCCCCHHHHHHHhCCCCC--CCCcccccCCCcccccccCcccccccccccccccccccccc Confidence 999998 899999999999864 34555554443332221111111000000000001111111 No 111 >protein:vir:108215 Length: 469 # NCBI annotation: gp6 # Family: family:all:2372 # MgeID: mge:2004 # MgeName: Giles # Cross-refs: genbank:acc:YP_001552335;genbank:gi:160700655;genbank:GeneID:5758935 Probab=99.82 E-value=2.9e-19 Score=122.21 Aligned_cols=396 Identities=10% Similarity=-0.014 Sum_probs=236.7 Q ss_pred CcccccccCCCC-cchhhHH-HhhcCCc-------------cccc-chhhhh-ccHHHHHHHHHHHHhhccceeEEEecC Q lcl|Aclame:pro 1 MSFFQPLGTSKV-SYDDYIS-SVLAGDV-------------SQKY-LGVSAL-KNSDILTATSIIAGDIARFPLVKKDVN 63 (406) Q Consensus 1 M~~f~~~~~~~~-~~~~~~~-~~~~~~~-------------~~~~-~~~~a~-~~~~v~~~i~~ia~~ia~~~~~~~~~~ 63 (406) |-=.-. ...+. ..+.... ++..+.. ...+ .-+..+ +.+.|.+|++.+...|.+++|.|...+ T Consensus 1 ~~~~~~-~~~p~~~~g~~~~~~~~~~~~~~~~~e~~~~lr~~~~~~ly~~m~e~D~~i~s~l~~rk~av~~~~w~v~p~~ 79 (469) T protein:vir:10 1 MTERVK-TAAPVSEAGYVFGSGVVDGWTVWDPFEQTPELQWPQSVAVYSRMDNEDSRVTSLLEAISLPIRSTPWRIRANG 79 (469) T ss_pred CCCccc-CCCCccchhhhhhcccccchhhccccccccccccccchHHHHHHHhhChHHHHHHHHHHHHHhcCCceEecCC Confidence 210000 00000 0000000 0000000 0000 112233 488899999999999999999997655 Q ss_pred CcccccchHHHHhhhhc------------cccCCHHHHHHHHHHHHHhcCCceEEEEecCC----Cc--eeEEEeecCCe Q lcl|Aclame:pro 64 GDIIHDEDINYLLNVKS------------TSNASARTWKFAMAVNAILTGNSFSRILRDPK----TN--QALQFQFYRPS 125 (406) Q Consensus 64 ~~~~~~~~~~~lL~~~P------------n~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~----~g--~~~~l~~l~p~ 125 (406) ........+...|.... +-..++.+++..++.+.+.+|-++.++++... +| .+..+.+.++. T Consensus 80 ~~~e~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~w~~~l~~~l~~a~~~G~s~~Eivw~~~~~~~dG~~~~~~l~~rp~~ 159 (469) T protein:vir:10 80 ASDEVTEFVSRNLMVPIDGEDDVRNPGRSRGRFSWAEHLEEVTSPTLQFGHAVFEQVYRPRNQSPDGRFWLRKLAPRPQW 159 (469) T ss_pred CCHHHHHHHHHHHHhhhhhhhhhhhhhhhhccccHHHHHHHHHHHhhhhCceeeeeeeecccccCCCceeeeeeeecCcc Confidence 44333333344332111 12346788888888888889999999988643 23 35566666666 Q ss_pred eE-EEEEccCcceEEEEEe-----------ecCCeEEEEcceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 126 ET-TVEETDNHEIVYTFTD-----------MLTAKQVKCFAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLI 192 (406) Q Consensus 126 ~~-~~~~~~~g~~~~~~~~-----------~~~g~~~~~~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~ 192 (406) .+ ....+.++.+...... ...+....+|+...++.++.+.. .++|.|.+..|+-..-......+... T Consensus 160 ~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lp~~k~i~~~~~~~~g~p~g~gLlr~~~~~~~fK~~~~~~w~ 239 (469) T protein:vir:10 160 TISKFNVAPDGGLESIEQIAPPARTRGSLYVANIAPPEIPVNRLVVYTRNKRPGQWQGKSILRSAYKHWLLKDKLLRIEA 239 (469) T ss_pred cceeeeeccCCceeeeeecCcccccccccccCCCCccccccCcEEEEEecCCCCCcccchhHHHHHHHHHHHHHHHHHHH Confidence 54 2334444444332221 11223456788887777776554 47999999999999999999999999 Q ss_pred HHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 193 KFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALR 272 (406) Q Consensus 193 ~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fg 272 (406) .+.+.-|.|-.+.+.+...++++++.+.+.+.....|.++ .++++.|++++-+..+.....|.+..++..++|+++.- T Consensus 240 ~f~EryG~P~~vgky~~~a~~~ek~~l~~a~~~~~~g~~a--~~iip~~~~ie~~ea~g~~~~~~~li~~~d~~Isk~iL 317 (469) T protein:vir:10 240 ATAERNGMGIPVGTASSATDEDEVRKMAALARSVRGGINA--GVGLAQGQILELLGVSGNLPDIRRAIEGHDRSIALSGL 317 (469) T ss_pred HHHHHcCCcceEEecCCCCCHHHHHHHHHHHHHHhcCCce--EEEccCCceEEEeecCCCchHHHHHHHHHHHHHHHHHh Confidence 9999988888888888888999999999988888766554 46689999888887666666788899999999987653 Q ss_pred CCHHHhcccccch-hHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc-------chhhhhhhhc-ccchhHHHHHHHHHH Q lcl|Aclame:pro 273 VPSYKLGVNSPNQ-SVAQLMEDYVTNDLPFYFDAITSELGLKTLNDK-------DRRLYHIEFD-TRSVTGRNVDEIVKL 343 (406) Q Consensus 273 vpp~~lg~~~~~~-n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~ 343 (406) -.---. ....++ +..+.........+.-.++.|++.||+.|+.+. ......+.|+ ...+.+..++.+.++ T Consensus 318 G~tlTs-~~~gGS~a~~~vh~ev~~d~~~sDa~~i~~tln~~li~~l~~lN~g~~~~~P~~~~~~~e~~~~~~a~~i~~l 396 (469) T protein:vir:10 318 AHFLNL-DGKGGSYALASVLEDPFTQAVHAYATSICRIANQHIIEDLVDINFGVDTPAPVLTFDPIGSRQDLTAAAVKLL 396 (469) T ss_pred cccccc-cCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEecCCCCcHHHHHHHHHHH Confidence 221111 111122 234555667778888999999999998775531 1111233443 334566678888999 Q ss_pred HhCCC-----cCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 344 VNNQI-----LTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 344 ~~~g~-----~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) ++.|+ ++.+.+|+.+|+|+-.+ ++....+. .|...... ........+.+..+....+ T Consensus 397 ~~~G~~~~~~~~~~~~~e~~gip~~~~--~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 458 (469) T protein:vir:10 397 YDAGVFDDDPAVKRAIRQRFNLPSELN--DTPSAEPE--EPAAVPNQ--SAAPARTRSSGNADARARA 458 (469) T ss_pred HhcCCccCccccHHHHHHHhCCCCCCC--Ccccccch--hcccCCCC--CccccccCCCCCccccccc Confidence 99998 45678999999997533 33332221 11100000 0001111111111111111 No 112 >protein:vir:79647 Length: 435 # NCBI annotation: PorT # Family: family:all:297 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285520;genbank:gi:148734503;genbank:GeneID:5220005 Probab=99.82 E-value=2.5e-20 Score=128.06 Aligned_cols=374 Identities=13% Similarity=0.075 Sum_probs=203.8 Q ss_pred CcccccccCCCCcchhhHHHhhcC-Ccc--------cccc--hh-h-hhccHHHHHHHHHHHHhhccceeEEEecCCccc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAG-DVS--------QKYL--GV-S-ALKNSDILTATSIIAGDIARFPLVKKDVNGDII 67 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~--~~-~-a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 67 (406) ||+|=.+++++....+.+...+.+ ..+ .... .- . +.+++.+.++|+.+|+++.+..+++...+.+. T Consensus 1 ~~~~m~~~~~~~~~~D~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Y~~~~l~~~~Vd~~aed~~r~g~~i~g~~~~~- 79 (435) T protein:vir:79 1 MGVFMSDKVKAITKEDGYNEIFGSKDGTFRPNAFYMQRAAFKALSQFYEEDGMARRIVDVIPEEMVTPGFKVDGVKNEK- 79 (435) T ss_pred CCcccccccccchhhcchhhhhcccccccccCcccCCcCCHHHHHHHHhcCchhhhhhccchHHhhcCCceecCCChHH- Confidence 999865554444333333232211 111 1111 11 1 24678889999999999999998875322211 Q ss_pred ccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEe-cC--------CCceeEEEeecCCeeEEEEEc------ Q lcl|Aclame:pro 68 HDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILR-DP--------KTNQALQFQFYRPSETTVEET------ 132 (406) Q Consensus 68 ~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~-~~--------~~g~~~~l~~l~p~~~~~~~~------ 132 (406) .+...+. .. ...+-+..++....++|.+++++.. +. ..|.+..+.+++|+.+.+... T Consensus 80 ---~~~~~~~----~l-~~~~~l~~a~~~~rl~G~~~i~i~~~d~~~~~~Pl~~~g~i~~i~v~d~~~i~~~~~~~dp~s 151 (435) T protein:vir:79 80 ---SFKSRWD----EL-RLNAKIIDALSWSRLFGGSAILAVVADNKMLKSPVKPGAQLEDIRVYDRYQITIHERETNARS 151 (435) T ss_pred ---HHHHHHH----Hh-hHHHHHHHHHHhhhccccEEEEEEecCCCCcccccccCCceeeEEeechhhccchhhccCCcc Confidence 1111111 11 1234455555556688998887764 32 124556788888877765332 Q ss_pred -cCcceEEEEEee-cCCeEEEEcceeeEeeccC-------CCCCccccCHH-HHHHHHHHHHHHHHHHHHHHHhcCCCcc Q lcl|Aclame:pro 133 -DNHEIVYTFTDM-LTAKQVKCFAHDVIHWKFF-------SHDTILGRSPL-LSLGDEIDLQTGGINTLIKFFKDGFSSG 202 (406) Q Consensus 133 -~~g~~~~~~~~~-~~g~~~~~~~~~vih~r~~-------~~~~~~G~s~~-~~~~~~i~~~~~~~~~~~~~~~ng~~~~ 202 (406) +.|.+.++.... .......+.++.|+||... +...++|.|++ +.+.+.|............++....... T Consensus 152 p~fg~P~~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~e~~~~~l~~~~~~~~~~~~l~~~~~~~v 231 (435) T protein:vir:79 152 VRYGEPKLYKISPGGDIPEFFVHYSRICIIDGERVSNEKRRQNDGWGASILNKRLIEAIVDYNYCQELATQLLRRKQQAV 231 (435) T ss_pred cccCcceEEEEecCCCCCceEEcceeEEEecCCcchhhhccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc Confidence 224444333322 2234568899999999743 23467899998 6888999999998888888765443332 Q ss_pred eEEe-ecCCC-CHHHHHHHHHHHHHHhccc-ccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHh- Q lcl|Aclame:pro 203 ILTM-KGAQL-SGDARQRARQEFEKMREGS-VGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKL- 278 (406) Q Consensus 203 ~~~~-~~~~~-~~e~~~~~~~~~~~~~~g~-~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~l- 278 (406) ..+. ....+ +++....+++++....... +.+.+++..++.+|+.++.+..+ +.+........||++.+||..+| T Consensus 232 ~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~i~~~~e~~e~~~~~lsg--l~~~~~~~~~~iaaa~~IP~t~L~ 309 (435) T protein:vir:79 232 WKARDLALMCDDEEGRYAARLRLAQVDDESGVGKAIGIDATDEEYEVLNSDVSG--VPEFLQEKIDRIVALTGIHEIIIK 309 (435) T ss_pred ccchhHHHhhcCccchHHHHHHHHHHHHhcCCCCceeEecCCcceEEEecccCC--HHHHHHHHHHHHHhhhCCCeeeec Confidence 2221 11122 2223334445554444332 23445555566789988877665 46677788889999999999876 Q ss_pred cccccc--hhHHHHHHHHHH-------HHHHHHHHHHHHHHHhhccCccchhhhhhhhcc--cchh-------HHHHHHH Q lcl|Aclame:pro 279 GVNSPN--QSVAQLMEDYVT-------NDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT--RSVT-------GRNVDEI 340 (406) Q Consensus 279 g~~~~~--~n~~~~~~~~~~-------~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~--~~~~-------~~~~~~~ 340 (406) |.+..+ ++.+...+.|+. ..+.|.++.+-+.+ ... ..+.++|+. ..+. ++.++++ T Consensus 310 G~s~~glnstgd~d~~~yyd~i~~~Qe~~l~p~l~~l~~li----~~s---~d~~~~f~pL~~~sekEkAei~~~~a~a~ 382 (435) T protein:vir:79 310 NKNTGGVSASQNTALETFYKLIDRKRVEDYKPILEFLLPFM----ISE---TEWSIEFEPLSVPSDKDKAEIMAKNVESV 382 (435) T ss_pred cCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hcC---CCCeEEeCCCCCCCHHHHHHHHHHHHHHH Confidence 433222 233344444443 33455544433332 211 245556641 1222 3456677 Q ss_pred HHHHhCCCcCHHHHHHHh-CCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccC Q lcl|Aclame:pro 341 VKLVNNQILTPNQGLVEL-GKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVN 400 (406) Q Consensus 341 ~~~~~~g~~t~NE~R~~~-g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~ 400 (406) ..++++|+++++|+|+.+ ...+..+-.++ ....++... +.......+||++. T Consensus 383 ~~~~~~g~i~~~e~r~~L~~~~~~~~~~~~------~~~~~~~~~--d~~~~~~~e~g~~~ 435 (435) T protein:vir:79 383 VKLKAEQAINLKETRDTLRSICPDLKIMDN------DNIELPEPE--DLDPEPGQEGGLNK 435 (435) T ss_pred HHHHhcCCCCHHHHHHHHHHhccccCCCCc------ccccCCccc--cCCCCCCCCCCCCC Confidence 889999999999999987 32222111111 111111111 12222333444433 No 113 >protein:vir:99232 Length: 526 # NCBI annotation: putative portal protein # Family: family:all:313 # MgeID: mge:1649 # MgeName: DMS3 # Cross-refs: genbank:acc:YP_950451;genbank:gi:119953652;genbank:GeneID:4643092 Probab=99.80 E-value=5.4e-18 Score=115.24 Aligned_cols=389 Identities=11% Similarity=0.015 Sum_probs=231.8 Q ss_pred Ccc-cccccC--------CCCc-chhhHHHhhcCCcccccchhh----------------------hh-ccHHHHHHHHH Q lcl|Aclame:pro 1 MSF-FQPLGT--------SKVS-YDDYISSVLAGDVSQKYLGVS----------------------AL-KNSDILTATSI 47 (406) Q Consensus 1 M~~-f~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~----------------------a~-~~~~v~~~i~~ 47 (406) |+- ++.-+. ...+ .-..+...+.+.++..+++.. .+ +.+.|.+|++. T Consensus 1 ~~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~iLr~a~~gd~~~~~~L~e~m~e~D~~i~s~l~~ 80 (526) T protein:vir:99 1 MAQIVDVYGNPIRTQQLREPQTSRLAGLAKEFAQHPAKGLTPAKLARILVEAEQGNLQAQAELFMDMEERDAHLFAEMSK 80 (526) T ss_pred CCeeECCCCCccccccccchhhhhhhhhhhhhcccCcCCCCHHHHHHHHHhhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 663 222111 0000 000011111222222222211 12 47889999999 Q ss_pred HHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc--eeEEEeecCCe Q lcl|Aclame:pro 48 IAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN--QALQFQFYRPS 125 (406) Q Consensus 48 ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g--~~~~l~~l~p~ 125 (406) +...|.+++|.|...+++.......+..+...-+....+.+++..++ +.+.+|-++.++++...+| .|..+.+.+|. T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~~~~~~i~~~l-da~~~G~s~~Eivw~~~~g~~~~~~l~~r~~~ 159 (526) T protein:vir:99 81 RKRAILGLDWAVEPPRNASAAEKADADYLHELLLDLEGLEDLLLDAL-DGIGHGYSCIELEWALQGREWMPLAFHHRPQS 159 (526) T ss_pred HHHHHhCCCceEecCCCCCHHHHHHHHHHHHHHhcccCHHHHHHHHH-HhhhhcceeEEEEEeecCCceeEEEeeeeccc Confidence 99999999999986544433333344444332222223556666666 4667999999999876655 46688888888 Q ss_pred eEEEEEccCcceEEEEEeecCCeEEEEcceeeEeeccCCC-CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceE Q lcl|Aclame:pro 126 ETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHWKFFSH-DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGIL 204 (406) Q Consensus 126 ~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~ 204 (406) ++.+..+....+ .+. ........+++...+..++... ..++|.+.+..|.-..-......+....|.+.-|.|-.+ T Consensus 160 ~f~~~~~~~~~l--~~~-~~~~~g~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~yG~P~~i 236 (526) T protein:vir:99 160 WFQLNPEDQNEL--RLR-DNSPAGEALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLEIYGLPIRL 236 (526) T ss_pred ceeeccCCCcEE--Eec-CCCCCceeecCCCeEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHHHcCCceEE Confidence 887654443322 222 2223345567665544455544 458999999999999999999999999999999999888 Q ss_pred EeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCC-hhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc- Q lcl|Aclame:pro 205 TMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEID-TNVLQLITSNNFSTAQIAKALRVPSYKLGVNS- 282 (406) Q Consensus 205 ~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~-~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~- 282 (406) .+++...++++++++.+.+.++.+ + ..++++.|++++-+..+ .....|.+..++..++|+++. ||.+. T Consensus 237 gky~~~a~~~ek~~L~~av~~i~~--d--~~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i------LGqtlT 306 (526) T protein:vir:99 237 GKYPPGTADEEKATLLRAVTGLGH--A--AAGIIPETMAIDFQQAAQGSSEPFLAMMRQSEDAISKAV------LGGTLT 306 (526) T ss_pred EecCCCCCHHHHHHHHHHHHHHhh--C--cEEEecCCceeEEeecCCCCHHHHHHHHHHHHHHHHHHH------hhhhhc Confidence 888888899999999988877743 2 25677888777766543 233447788889999998664 44311 Q ss_pred -------cchhH-HHHHHHHHHHHHHHHHHHHHHHHHhhccCccc----------hhhhhhhhc--ccchhHHHHHHHHH Q lcl|Aclame:pro 283 -------PNQSV-AQLMEDYVTNDLPFYFDAITSELGLKTLNDKD----------RRLYHIEFD--TRSVTGRNVDEIVK 342 (406) Q Consensus 283 -------~~~n~-~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~ 342 (406) .+++. .+....-....+.-.++.|++.||+.|+.+.- ...-.+.|+ ...|++..++.+.+ T Consensus 307 s~~~~g~~gS~a~g~vh~~v~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~~e~eDl~~~a~~~~~ 386 (526) T protein:vir:99 307 STTSQSGGGAFALGQVHNEVRHDLLASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDLREQADITSMAQSIPA 386 (526) T ss_pred cccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCCCCcccHHHHHHHHHH Confidence 12221 23344556777888999999999987754211 011123443 34577888999999 Q ss_pred HHhCCC-cCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 343 LVNNQI-LTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 343 ~~~~g~-~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) +++.|+ ++..++|+.+|+|.- ..++.+..+..-.+...... ................+.+. T Consensus 387 L~~~G~~i~~~~i~e~~Gip~~--~~~e~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 448 (526) T protein:vir:99 387 LVNVGLEIPSAWVYDKLGIPQP--AKNEPVLRSAAQPAILSRQH-GQRVAALATIVGPRYGDQQA 448 (526) T ss_pred HHhCCCccCHHHHHHHhCCCCC--CCcccccCCCCCCccccccc-ccccccccccccccCcchhh Confidence 999998 899999999999764 33444443322111000000 00000000000001111111 No 114 >protein:vir:79233 Length: 526 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1867 # MgeName: Phage MP22 # Cross-refs: genbank:acc:YP_001469155;genbank:gi:157834998;genbank:GeneID:5648814 Probab=99.78 E-value=6e-18 Score=114.99 Aligned_cols=388 Identities=11% Similarity=-0.003 Sum_probs=231.7 Q ss_pred Ccc-cccccCC--------CCcc-hhhHHHhhcCCcccccchh----------------------hhh-ccHHHHHHHHH Q lcl|Aclame:pro 1 MSF-FQPLGTS--------KVSY-DDYISSVLAGDVSQKYLGV----------------------SAL-KNSDILTATSI 47 (406) Q Consensus 1 M~~-f~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~----------------------~a~-~~~~v~~~i~~ 47 (406) |+- ++.-+.. +.+. -..+...+.+.++..+++. ..+ +.+.|.+|+.. T Consensus 1 ~~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~il~~a~~gd~~~~~~L~edm~e~D~~i~s~l~~ 80 (526) T protein:vir:79 1 MAQIVDVYGNPIRPQQLREPQTSRLAGLAKEFAQHPAKGLTPAKLARILVEAEQGNLQAQAELFMDMEERDAHLFAEMSK 80 (526) T ss_pred CCeeeCCCCCccCccccchhhhhhhhhhhhhcccCCCCCcCHHHHHHHHHHhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 653 2221110 0000 0001111111222222221 122 47889999999 Q ss_pred HHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc--eeEEEeecCCe Q lcl|Aclame:pro 48 IAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN--QALQFQFYRPS 125 (406) Q Consensus 48 ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g--~~~~l~~l~p~ 125 (406) +...|.+++|.|...+++.......+..+...-+....+.+++..++. .+.+|-++.++++...+| .|..+.+.+|. T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~~~~~~i~~~ld-A~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~ 159 (526) T protein:vir:79 81 RKRAILGLDWAVEPPRNASAAEKADADYLHELLLDLEGLEDLLLDALD-GIGHGYSCIELEWALQGREWMPLAFHHRPQS 159 (526) T ss_pred HHHHHhCCCceEecCCCCChHHHHHHHHHHHHHhcccCHHHHHHHHHh-hhhhcceeEEEEEeecCCceeEEEeeeeccc Confidence 999999999999865444333333444443222222235566666555 557999999999876655 46678888888 Q ss_pred eEEEEEccCcceEEEEEeecCCeEEEEcceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceE Q lcl|Aclame:pro 126 ETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGIL 204 (406) Q Consensus 126 ~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~ 204 (406) ++.+..+....+ .+. ........+++...+..++.... .++|.+.+..|.-..-......+.-..|.+.-|.|-.+ T Consensus 160 ~F~~~~~~~~~l--~~~-~~~~~g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~F~E~yG~P~~i 236 (526) T protein:vir:79 160 WFQLNPEDQNEL--RLR-DNSPAGEALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLEIYGLPIRL 236 (526) T ss_pred ceEeccCCCcEE--Eec-CCCCCceeecCCceEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHHHcCCceEE Confidence 777654433322 222 22233456777766555665544 47999999999999999998899999999998999888 Q ss_pred EeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCC-hhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc- Q lcl|Aclame:pro 205 TMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEID-TNVLQLITSNNFSTAQIAKALRVPSYKLGVNS- 282 (406) Q Consensus 205 ~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~-~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~- 282 (406) .+++...++++++++.+.+.++.+ + ..++++.|++++-+..+ .....|.+..++..++|+++. ||.+. T Consensus 237 gky~~~a~~~ek~~L~~av~~i~~--d--a~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i------LGqtlT 306 (526) T protein:vir:79 237 GKYPPGTADEEKATLLRAVTGLGH--A--AAGIIPETMAIDFQQAAQGSSEPFLAMMRQSEDAISKAV------LGGTLT 306 (526) T ss_pred EecCCCCCHHHHHHHHHHHHHHhc--C--cEEEecCCceeEEeecCCCCHHHHHHHHHHHHHHHHHHH------hhhhhc Confidence 888888899999999888888753 2 35778888777766543 233457888889999998653 44311 Q ss_pred -------cchhH-HHHHHHHHHHHHHHHHHHHHHHHHhhccCccc----------hhhhhhhhc--ccchhHHHHHHHHH Q lcl|Aclame:pro 283 -------PNQSV-AQLMEDYVTNDLPFYFDAITSELGLKTLNDKD----------RRLYHIEFD--TRSVTGRNVDEIVK 342 (406) Q Consensus 283 -------~~~n~-~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~ 342 (406) .+++. .+....-....+.-.+++|++.||+.|+.+.- ...-.+.|+ ...|+++.++.+.+ T Consensus 307 s~~~~g~~gS~a~g~vh~~v~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~~e~eDl~~~a~~~~~ 386 (526) T protein:vir:79 307 STTSQSGGGAFALGQVHNEVRHDILASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDLREQADITSMAQSIPA 386 (526) T ss_pred cccccCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCCCCcccHHHHHHHHHH Confidence 12221 23345566778888999999999987754211 011123443 45577889999999 Q ss_pred HHhCCC-cCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 343 LVNNQI-LTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 343 ~~~~g~-~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) +++.|+ ++..++|+.+|+|.- ..++.+..|... |............ ...........++. T Consensus 387 L~~~G~~i~~~~i~e~~gip~~--~~~e~~l~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 447 (526) T protein:vir:79 387 LVNVGLEIPSAWVYDKLGIPQP--AKNEPVLRPAAQ-PAILSRQHGQRVA-ALATIVGPRYGDQQ 447 (526) T ss_pred HHhCCCcCCHHHHHHHhCCCCC--CCchhhccccCC-ccccccccccccc-cccccccccCchhh Confidence 999998 899999999999754 234444433221 1000000000000 00000000011111 No 115 >protein:vir:96068 Length: 765 # NCBI annotation: conserved hypothetical protein ORF017 # Family: family:all:297 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294434;genbank:gi:149408331;genbank:GeneID:5237187 Probab=99.77 E-value=1.3e-18 Score=118.57 Aligned_cols=391 Identities=10% Similarity=0.007 Sum_probs=201.1 Q ss_pred Cccccc------------------------------------ccC--CCCcchhhHHHhhcCCccc-ccchhhhhccHHH Q lcl|Aclame:pro 1 MSFFQP------------------------------------LGT--SKVSYDDYISSVLAGDVSQ-KYLGVSALKNSDI 41 (406) Q Consensus 1 M~~f~~------------------------------------~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~v 41 (406) -+|... ... ...........++...... +..-.-+.+++.+ T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~gyql~alY~~~~l~ 123 (765) T protein:vir:96 44 RGWNVEPEKAPVIRSVKDFLEPGLSVAMDSAYGDGPTPAAKAAAGGQNPYVVPTMLQDWYNSQGFIGYQACAIISQHWLV 123 (765) T ss_pred hhcccccccCCCCCCCCcccCcccceeccccccccccchHHHhhhccCccchhhHHHhhhcccCCccHHHHHHHHhCchh Confidence 111100 000 0000111111111110000 1111123468888 Q ss_pred HHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC-------- Q lcl|Aclame:pro 42 LTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKT-------- 113 (406) Q Consensus 42 ~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~-------- 113 (406) ..+|+.+|+++.+-.+++...+.+ ... .....|+..-... ...+-+..++...-++|.+|+++..+..+ T Consensus 124 rkiVd~pAeDa~R~g~~I~~~~~e-~~~-~~~~~l~~~~~rl-~v~~~l~ea~~~~RlyGga~i~i~i~~~D~~~l~~PL 200 (765) T protein:vir:96 124 DKACSMSGEDAARNGWELKSDGRK-LSD-EQSALIARRDMEF-RVKDNLVELNRFKNVFGVRIALFVVESDDPDYYEKPF 200 (765) T ss_pred hhhhhcchHHhhcCCceeecCccc-cCH-HHHHHHHHHHHHh-hHHHHHHHHHHHhhhceeeEEEEEecccCcchhhccc Confidence 999999999999988888543222 111 1112222111111 12455555566666889999887654322 Q ss_pred -------ceeEEEeecCCeeEEEEEc-----c-----CcceEEEEEeecCCeEEEEcceeeEeeccCC-------CCCcc Q lcl|Aclame:pro 114 -------NQALQFQFYRPSETTVEET-----D-----NHEIVYTFTDMLTAKQVKCFAHDVIHWKFFS-------HDTIL 169 (406) Q Consensus 114 -------g~~~~l~~l~p~~~~~~~~-----~-----~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~-------~~~~~ 169 (406) |....+..++|.++.+... + .|.+.++. ..+ ..+.++.|+||...+ ..+++ T Consensus 201 ~~~~I~kg~~kgl~vldp~~~~~~~v~e~~~Dp~sp~fg~P~~y~---i~g--~~IH~SRli~~~g~~lpd~lk~~~~~~ 275 (765) T protein:vir:96 201 NPDGIAPGSYKGISQIDPYWAMPQLTAESTADPSAEHFYEPDFWI---ISG--KKYHRSHLVVVRGPQPPDILKPTYIFG 275 (765) T ss_pred cccccccceeeEEEEechhhcccccchhccccccccccCcceeee---ecC--ceeccceEEEecCCCchhhhccccCcc Confidence 2345566677665554211 1 12222221 123 357788899987543 23567 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccC Q lcl|Aclame:pro 170 GRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEI 249 (406) Q Consensus 170 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~ 249 (406) |.|.++.+...|............++.......+.+.....+.. .+.++++++......++.++++++.+-+|+.++. T Consensus 276 G~Svlq~~yd~I~~~~~t~~~~a~Ll~k~~~~v~k~~~~~~l~~--~~~l~~r~~~~~~~r~n~g~~~id~ee~~e~~s~ 353 (765) T protein:vir:96 276 GIPLTQRIYERVYAAERTANEAPLLAMSKRTSTIHVDVEKAIAN--EDAFNARLAFWIANRDNHGVKVIGIDETMEQFDT 353 (765) T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHhccceeeechHhhhcc--HHHHHHHHHHHHHhcCCceeEEecCCcceeEEec Confidence 99999999999999999998888887765544333322222222 2345555655555544566889999999999987 Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCCHHHh-ccccc--chhHHHHHHHHHH-------HHHHHHHHHHHHHHHhhccCccc Q lcl|Aclame:pro 250 DTNVLQLITSNNFSTAQIAKALRVPSYKL-GVNSP--NQSVAQLMEDYVT-------NDLPFYFDAITSELGLKTLNDKD 319 (406) Q Consensus 250 ~~~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g~~~~--~~n~~~~~~~~~~-------~~i~P~~~~ie~~l~~~l~~~~~ 319 (406) +..++ .+........||.+.+||-.+| |.+.. +++.+...+.||. ..+.|.++.+-+.|-+.- .. T Consensus 354 ~lsgl--~d~l~~~~~~iAaas~IP~t~LfGqsp~GlnATGe~D~~nYyD~I~s~Qe~~l~p~le~L~~li~~s~-~i-- 428 (765) T protein:vir:96 354 NLSDF--DSVIMNQYQLVAAIAKTPATKLLGTSPKGFNATGEHETISYHEELESIQEHIFDPLLERHYLLLAKSE-SI-- 428 (765) T ss_pred ccCCH--HHHHHHHHHHHHhhhCCCeeeeccCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC-- Confidence 76654 5666777889999999999776 43323 3333444454554 456676666666554321 11 Q ss_pred hhhhhhhhcc--cchh-------HHHHHHHHHHHhCCCcCHHHHHHHhCCCCC------CCCCCC--eeeeccCccchhh Q lcl|Aclame:pro 320 RRLYHIEFDT--RSVT-------GRNVDEIVKLVNNQILTPNQGLVELGKQKS------TDPNMD--RYQSSLNYVFLDK 382 (406) Q Consensus 320 ~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~------~~~~gd--~~~~~~n~~~~~~ 382 (406) ...+.++|.. ..+. ++.++++..++++|+++++|+|+.|+.+|. +++..+ ....|.+...++. T Consensus 429 ~~d~~i~FnpL~~~sekEkAei~~k~Aea~~~~~~~Gvis~dEvR~~L~~~~~~g~~~l~d~~~e~~~~~~pe~~~~~~~ 508 (765) T protein:vir:96 429 DVQLEIVWNPVDSTTSQQQAELNNKKAATDEIYINSGVVSPDEVRERLRDDPRSGYNRLTDDQAETEPGMSPENLAELEK 508 (765) T ss_pred CCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccccCCCCCCCccccccccCCCccccccccC Confidence 1235666641 1222 234567788999999999999999866543 211110 1111111111110 Q ss_pred cccc----------ccccCcccCCC-ccC-------------CCCCCC Q lcl|Aclame:pro 383 KEEY----------QDKVGIKGKGG-EVN-------------AEEDKS 406 (406) Q Consensus 383 ~~~~----------~~~~~~~~~gg-~~~-------------~~~~~~ 406 (406) .... .+...+..+|+ +.. ..+... T Consensus 509 ~~~~~~~~~~e~~~~~a~p~~~eg~~~~~~~~p~~~~p~~~~~~~~~g 556 (765) T protein:vir:96 509 AGAQSAKAKGEAERAEAQAGAVEGAGDPVPAAPRGTKPLAKAAEEGAG 556 (765) T ss_pred CCcccccccCccccccCCCCccCCCCcccccCCcccCCccccccccCc Confidence 0000 00000000000 000 000000 No 116 >protein:vir:104338 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398967;genbank:gi:81343951;genbank:GeneID:3778870 Probab=99.77 E-value=7.8e-19 Score=119.87 Aligned_cols=364 Identities=14% Similarity=0.054 Sum_probs=199.4 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcc-------cccch----hhhhccHHHHHHHHHHHHhhccceeEEEecCCccccc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVS-------QKYLG----VSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHD 69 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~----~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 69 (406) |--- +.+...+.++... ...+. .-+.+++.+.++|+.+|+++.+..|++...+.+.... T Consensus 1 ~~~~----------D~~~n~~~gg~~~~~~~~~~~~~~~~~l~a~Y~~~~l~~~~Vd~~aed~~r~g~~i~~~~~~~~~~ 70 (422) T protein:vir:10 1 MVKT----------DSYANIFLGGSDGSEIYGSLQNQAPTILASLYADNALVRRIIDTIPETALAAGFHIDGIDDEPAFW 70 (422) T ss_pred Cccc----------hhhHHHHcCCCCCccccCcccccCHHHHHHHHHhChhhHHHHhhhhHHHhcCCccccCCCHHHHHH Confidence 2111 1111111111100 00111 1134688889999999999999988875332221111 Q ss_pred chHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEe-cC--------CCceeEEEeecCCeeEEEEEc-------c Q lcl|Aclame:pro 70 EDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILR-DP--------KTNQALQFQFYRPSETTVEET-------D 133 (406) Q Consensus 70 ~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~-~~--------~~g~~~~l~~l~p~~~~~~~~-------~ 133 (406) ..+. .|+ ..+-+..++....++|.+++++.. +. ..|.+..+.+++++.+.+... + T Consensus 71 ~~~~-~l~--------~~~~l~~a~~~~rl~G~a~i~i~v~d~~~~~~Pl~~~g~~~~l~v~d~~~i~~~~~~~dp~s~~ 141 (422) T protein:vir:10 71 SRWD-DLE--------MTQNINDAWSWARLFGGAAIVAIVKDNRALTSPVREGAELETVRVYDRTQVKVQTREENPRNAR 141 (422) T ss_pred HHHH-Hhh--------HHHHHHHHHHhhccccceEEEEEecCCCCccccccccCceeeEEeeccccccchhcccCccccc Confidence 1111 121 234455555666688999988875 22 235677888888888776432 2 Q ss_pred CcceEEE-EEeecCCeEEEEcceeeEeeccC-------CCCCccccCHHHH-HHHHHHHHHHHHHHHHHHHhcCCCcceE Q lcl|Aclame:pro 134 NHEIVYT-FTDMLTAKQVKCFAHDVIHWKFF-------SHDTILGRSPLLS-LGDEIDLQTGGINTLIKFFKDGFSSGIL 204 (406) Q Consensus 134 ~g~~~~~-~~~~~~g~~~~~~~~~vih~r~~-------~~~~~~G~s~~~~-~~~~i~~~~~~~~~~~~~~~ng~~~~~~ 204 (406) .|.+.++ +.....+....+.++.|+||... +.+.++|.|++.. +.+.|............++......... T Consensus 142 fg~P~~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~~~~~~~v~~ 221 (422) T protein:vir:10 142 FGEPLTYRITTNESDMFYDVHYSRIHIIDGERIPNVMRRQNDGWGRSVLSSDILDSIKDYTNCERLATQLLKRKQQAVWK 221 (422) T ss_pred cCcceEEEEecCCCCcceeeccceeEEeCCCCchhhhcccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc Confidence 2444333 33334455578889999999643 2345689999986 6798999999888888876554433322 Q ss_pred Ee-ecCCC-CHHHHHHHHHHHHHHhccc-ccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHh-cc Q lcl|Aclame:pro 205 TM-KGAQL-SGDARQRARQEFEKMREGS-VGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKL-GV 280 (406) Q Consensus 205 ~~-~~~~~-~~e~~~~~~~~~~~~~~g~-~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g~ 280 (406) +. ..+.. ..+....+++++....... +.+.+++..++.+|++++.+..+ +.+.......+||++.+||..+| |. T Consensus 222 ~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~e~~e~~~~~lsg--l~~~~~~~~~~iaaa~~IP~t~L~G~ 299 (422) T protein:vir:10 222 AKGLAELCDDSEGFGAARLRLAQVDNNSGVGQAIGIDAESEEYSVLNSDIGG--IDAFLDKKFDRIVALSGIHEIILKNK 299 (422) T ss_pred chhHHHhcCCccchHHHHHHHHHHHHhcCCccceeEecCCcceEEEecccCC--hHHHHHHHHHHHHhhhCCCeeeeccC Confidence 22 11122 2233444555555554332 33445555667899988877765 46677888889999999999987 43 Q ss_pred cccc--hhHHHHHHHHHH-------HHHHHHHHHHHHHHHhhccCccchhhhhhhhcc--cch-------hHHHHHHHHH Q lcl|Aclame:pro 281 NSPN--QSVAQLMEDYVT-------NDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT--RSV-------TGRNVDEIVK 342 (406) Q Consensus 281 ~~~~--~n~~~~~~~~~~-------~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~ 342 (406) +..+ ++.++..+.|+. .-+.|.++.+-..+ ... ..+.++|+. ..+ .++.++++.. T Consensus 300 s~~Glnatgd~d~~~yyd~i~~~Qe~~l~p~l~~l~~~i----~~s---~~~~~~f~pL~~~sekekaei~~~~a~a~~~ 372 (422) T protein:vir:10 300 NVGGVSSSQNTALETFHKLVDRKRNAELLPILEFLIPFI----VNA---EEWSVEFNPLAQESSKDKAEILEKNVNSIAA 372 (422) T ss_pred CcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----ccc---CCcEEEeCCCCCCCHHHHHHHHHHHHHHHHH Confidence 3222 233344444443 34556555444333 211 235556641 111 2345667888 Q ss_pred HHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCC Q lcl|Aclame:pro 343 LVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEED 404 (406) Q Consensus 343 ~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~ 404 (406) ++++|+++++|+|+.|--..... -+..+..+.+.... ......+++.++| T Consensus 373 ~~~~g~i~~~e~r~~L~~~~~~~------~~~~~~~~~~~~~~------~~~~~~~~~~~~d 422 (422) T protein:vir:10 373 LIAAGAMDIDEARDTLRTIAPEV------KINDGSVETEVTIS------ETSNDPLEVPTDD 422 (422) T ss_pred HHhcCCCCHHHHHHHhhhhcccc------cCCCCCCccccchh------hcCCCCCCCCCCC Confidence 99999999999999884332211 11112222211110 0001111122222 No 117 >protein:vir:99853 Length: 488 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1480 # MgeName: B3 # Cross-refs: genbank:acc:YP_164068;genbank:gi:56692600;genbank:GeneID:3192581 Probab=99.76 E-value=3.5e-17 Score=110.82 Aligned_cols=372 Identities=11% Similarity=0.018 Sum_probs=222.2 Q ss_pred CcccccccCCCCc-chhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhh Q lcl|Aclame:pro 1 MSFFQPLGTSKVS-YDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVK 79 (406) Q Consensus 1 M~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~ 79 (406) +.+++...+...+ .+..+..-..++.. .+ ...++.+.|.+|++.+...|.+++|.+...+.. ......+..+... T Consensus 17 ~d~~~~~~~~l~~~~~~il~~a~~g~~~-~y--~~l~~D~~i~s~l~~rk~av~~~~w~i~p~~~~-~~~~~~ae~v~~~ 92 (488) T protein:vir:99 17 RDITRPFISGLQVPNDSILQRRGGNDLR-VY--EEILSDAQVKTVWGQRQLAVVSREWKVEAGGDR-PIDQAAAEHLEQQ 92 (488) T ss_pred hhhhccccCCCCCCChHHHHhhccCCHH-HH--HHHhhChHHHHHHHHHHHHHhcCCceEEcCCCC-hHHHHHHHHHHHH Confidence 2222222111111 11111111111110 00 224578889999999999999999999754332 2222233333221 Q ss_pred ccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCce--eEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcce-- Q lcl|Aclame:pro 80 STSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQ--ALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAH-- 155 (406) Q Consensus 80 Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~--~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~-- 155 (406) - ....+.++++.++ +.+.+|-++.++++...+|. |..+.+.++.++.+. .+++..+.... .......++.. T Consensus 93 l-~~~~~~~~l~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d--~~~~l~~~~~~-~~~~g~~lp~~~~ 167 (488) T protein:vir:99 93 L-QRVGWDRVTSKML-FGVFYGYAVSELIYGRDDRYITLEAIKVRNRRRFRYD--QDGGLRLLTPN-NMFEGEPCPAPYF 167 (488) T ss_pred H-hCCCHHHHHHHHH-hhhhhcceeEEEEEeecCCeeeEeeeeeecccceeec--CCCceEEeccC-CCCCccccccCce Confidence 1 1235677777776 46689999999998766654 567888888877653 44444443322 22223445432 Q ss_pred eeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecC-CCCHHHHHHHHHHHHHHhcccccCc Q lcl|Aclame:pro 156 DVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGA-QLSGDARQRARQEFEKMREGSVGGS 234 (406) Q Consensus 156 ~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g~~~~~ 234 (406) =++|........++|.|.+..|.-..-......+....+.+.-|.|-.+.+.+. ..++++++++.+.+.+... + . T Consensus 168 ~i~~~~~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P~~igky~~~~a~~~ek~~l~~av~~~~~--~--~ 243 (488) T protein:vir:99 168 WHFSTGADNDDEPYGLGLAHWLYWPVFFKRNGIKFWLIFLDKFGMPTAVGRYDDKTATPEDKAKLLAALHAIQT--D--S 243 (488) T ss_pred EEEEeecCCCCCcccchHHHHHHHHHHHHHhhHHHHHHHHHHcCCceeeeecCCCCCCHHHHHHHHHHHHHHhc--C--c Confidence 334433333345899999999999999999999999999998888877777764 5678888888888777643 2 3 Q ss_pred eeeccCCceeeeccCC-hhHHHHHHHHHHHHHHHHHHhcCCHHHhccc-----ccchh-HHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 235 PLVFDSTMEYTPLEID-TNVLQLITSNNFSTAQIAKALRVPSYKLGVN-----SPNQS-VAQLMEDYVTNDLPFYFDAIT 307 (406) Q Consensus 235 ~~vl~~g~~~~~l~~~-~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~-----~~~~n-~~~~~~~~~~~~i~P~~~~ie 307 (406) .++++.|++++-+... .....|.+..++..++|+++ +||.+ .++++ ..+.........+...++.|+ T Consensus 244 ~~viP~~~~ie~~ea~~~~~~~~~~li~~~d~~Isk~------iLGqtlts~~~~Gs~a~~~vh~~v~~d~~~aDa~~i~ 317 (488) T protein:vir:99 244 AIIMPAGMQAELLEAGRSGTADYKTLHDTMDATIAKV------GLGQVASTQGTPGRLGNDDLQADVRLDLVKADADLIC 317 (488) T ss_pred EEEecCCceeEEeecCCCChHHHHHHHHHHHHHHHHH------HhhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHH Confidence 5677777776666532 22235788888999999877 44431 12222 233445566788889999999 Q ss_pred HHHHhhccCcc------chh--hhhhhhcccchhHHHHHHHHHHHhC-CC-cCHHHHHHHhCCCCCCCCCCCeeeeccCc Q lcl|Aclame:pro 308 SELGLKTLNDK------DRR--LYHIEFDTRSVTGRNVDEIVKLVNN-QI-LTPNQGLVELGKQKSTDPNMDRYQSSLNY 377 (406) Q Consensus 308 ~~l~~~l~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~t~NE~R~~~g~~p~~~~~gd~~~~~~n~ 377 (406) +.||+.|+.+. ... .+.+......|+++.++.+.++++. |+ ++..++|+.+|+|+-. .++....|.. T Consensus 318 ~tln~~li~~l~~~N~~~~~~p~~~~~~~e~edl~~~a~~~~~l~~~~G~~i~~~~i~e~~Gip~~~--~~~~~~~~~~- 394 (488) T protein:vir:99 318 ESFNLGPARWLTEWNFPGAQPPRVYRVIEEPEDITAKAERDEKVFRMSGFRPTRGYVQETYGVEVES--TQAEATAPTP- 394 (488) T ss_pred HHHHHHHHHHHHHhCcCCcCCceeEecCCCcccHHHHHHHHHHHHhhcCCCCCHHHHHHHcCCCCcc--cccccccCCC- Confidence 99998775421 111 2334444456788899999999996 76 7899999999999752 2333221110 Q ss_pred cchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 378 VFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 378 ~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) .....++....+..+.. T Consensus 395 ------------~~~~~~~~~~~~~~~~~ 411 (488) T protein:vir:99 395 ------------STEFAEGDQPSDPAAAM 411 (488) T ss_pred ------------cccCCCCCCCCCchHHH Confidence 01111111111111111 No 118 >protein:vir:79063 Length: 491 # NCBI annotation: gp3 # Family: family:all:313 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111203;genbank:gi:134288841;genbank:GeneID:4960737 Probab=99.75 E-value=1.1e-16 Score=108.12 Aligned_cols=377 Identities=11% Similarity=-0.022 Sum_probs=225.4 Q ss_pred Cc--ccc----cccCC--CCcchh-------hHHHhhcCCcccc------------cchhhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MS--FFQ----PLGTS--KVSYDD-------YISSVLAGDVSQK------------YLGVSALKNSDILTATSIIAGDIA 53 (406) Q Consensus 1 M~--~f~----~~~~~--~~~~~~-------~~~~~~~~~~~~~------------~~~~~a~~~~~v~~~i~~ia~~ia 53 (406) |. ++. +.+.. ..+... .+.....+...+. -.-+..++.+.|.+|++.+...|. T Consensus 1 ~~~~i~~~~g~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~p~~~~il~~~~~~~~~y~~m~~D~~i~s~l~~Rk~av~ 80 (491) T protein:vir:79 1 MSKGLWVSPTEFVKFGEPDKSLSSQIATRARSIDFFALGMYLPNPDPVLKALGKDIRVYRELRADAHVGGCVRRRKAAVK 80 (491) T ss_pred CCCeeeCCCCCcccccccchhHHHHHhhhccccccccccccCcchhHHHhhccCCHHHHHHHhhChHHHHHHHHHHHHHh Confidence 32 221 11100 000000 0000000000000 011124578889999999999999 Q ss_pred cceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCce--eEEEeecCCeeEEEEE Q lcl|Aclame:pro 54 RFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQ--ALQFQFYRPSETTVEE 131 (406) Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~--~~~l~~l~p~~~~~~~ 131 (406) +++|.|...+.+......+..+|. ++ .+.++++.++ +.+.+|-++.++++...+|. |..+.+.+|.++.+. T Consensus 81 ~~~w~i~~~~~~~~~a~~i~e~l~-~~----~~~~~i~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d- 153 (491) T protein:vir:79 81 ALEWGLDRGKAKSRVAKSIADVFA-DL----DLSRIATEML-DAVLYGYQPMEITWGKVGNYIVPIDVVGKPADWFVYD- 153 (491) T ss_pred CCCcEEecCCCCHHHHHHHHHHHh-cC----CHHHHHHHHH-HhhhhcceeEEEEEeecCCeeeEEeeeeecccceeec- Confidence 999999765544332334444443 33 4566666664 56679999999988766654 567888888877753 Q ss_pred ccCcceEEEEEeecCCeEEEEcceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCC Q lcl|Aclame:pro 132 TDNHEIVYTFTDMLTAKQVKCFAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQ 210 (406) Q Consensus 132 ~~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~ 210 (406) .++++.+.... .......+++...+++++.+.. .++|.|.+..|.-..-......+....+.+.-|.|-.+.+++.. T Consensus 154 -~~~~l~l~~~~-~~~~g~~lp~~k~i~~~~~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~~G~P~~igky~~~ 231 (491) T protein:vir:79 154 -PENQLRFRSKE-HWVQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSPMLVGKHPRS 231 (491) T ss_pred -cCCceEEeecC-CCCCceeecCCCeEEEEecCCCCCcccchhHHHHHHHHHHHHhhHHHHHHHHHHcCCCeEEEecCCC Confidence 34555444322 2233456788888887876554 48999999999999999999999999999999999888888888 Q ss_pred CCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCC---hhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc----c Q lcl|Aclame:pro 211 LSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEID---TNVLQLITSNNFSTAQIAKALRVPSYKLGVNS----P 283 (406) Q Consensus 211 ~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~---~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~----~ 283 (406) .++++++++.+.+.++.. ++ .++++.|++++-+..+ .....|.+..++..++|+++. ||.+. + T Consensus 232 a~~~ek~~l~~al~~~~~--~a--~~viP~~~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~i------LGqtlTt~~~ 301 (491) T protein:vir:79 232 ASDAETNLLLDRLEDMVQ--DA--VAVIPDDSSIEIKEAAGKSGSADVYERLLHFCRGEVSIAL------LGQNQTTEAT 301 (491) T ss_pred CCHHHHHHHHHHHHHHhc--Ce--EEEecCCceeEEEeccCCCCChhHHHHHHHHHHHHHHHHH------hhhhhccCcc Confidence 899999998888887743 22 4677777766665332 223347778888888888754 55321 1 Q ss_pred chh-HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc------chhhhhhhhcccc-hhHHHHHHHHHHHhCCC-cCHHHH Q lcl|Aclame:pro 284 NQS-VAQLMEDYVTNDLPFYFDAITSELGLKTLNDK------DRRLYHIEFDTRS-VTGRNVDEIVKLVNNQI-LTPNQG 354 (406) Q Consensus 284 ~~n-~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~-~t~NE~ 354 (406) +++ ..+....-....+.-.++.|++.||+ |+.+. ......+.+.... +.+.+++.+.++++.|+ ++.+++ T Consensus 302 gs~a~~~vh~~v~~~i~~~D~~~i~~tln~-li~~l~~~N~~~~~~p~f~~~e~ee~~~~~a~~~~~L~~~G~~i~~~~~ 380 (491) T protein:vir:79 302 STRASAQAGLEVTDDIRDGDKAIVVEAMNM-LIRWICDLNFDGAARPVFDMWEQEQVDEIQAGRDEKLTRAGARFTPAYF 380 (491) T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcceEeecCcCchhHHHHHHHHHHHhCCCccCHHHH Confidence 221 12334445667777888888888885 54321 1112233333333 34567888899999997 899999 Q ss_pred HHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 355 LVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 355 R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) |+.+|+|+- +.++....+..-.+. .........+.+++..|.. T Consensus 381 ~e~~Gip~~--~~~e~~~~~~~~~~~-------~~~~~~~~~~~~~~~~d~~ 423 (491) T protein:vir:79 381 KRAYNLQDG--DLDERPLPVSAVDAV-------GAASFAEFEAPDQDALDAA 423 (491) T ss_pred HHHhCCCCC--CCCccccCcCccccc-------ccccccccCCCCCcchHHH Confidence 999999874 233332211110000 0000000111111111111 No 119 >protein:vir:80040 Length: 461 # NCBI annotation: gp3 # Family: family:all:297 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468707;genbank:gi:157325287;genbank:GeneID:5601731 Probab=99.74 E-value=2.7e-18 Score=116.89 Aligned_cols=379 Identities=15% Similarity=0.081 Sum_probs=201.6 Q ss_pred CcccccccC-----CCCcchhhHHHhhcCCc------ccc-----cch----hhhhccHHHHHHHHHHHHhhccceeEEE Q lcl|Aclame:pro 1 MSFFQPLGT-----SKVSYDDYISSVLAGDV------SQK-----YLG----VSALKNSDILTATSIIAGDIARFPLVKK 60 (406) Q Consensus 1 M~~f~~~~~-----~~~~~~~~~~~~~~~~~------~~~-----~~~----~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 60 (406) |+=-+.... ...+...++.++..+.. ..+ +.. .-+.+++.+..+|+.+|+.+-+.++++. T Consensus 1 ~~~~~~a~~~~~~~~a~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~l~~lY~~~~l~r~iVd~~a~d~~r~g~~i~ 80 (461) T protein:vir:80 1 MYSIDKAKQAKIDSKIVNRNDFMVGHGKANSRDKLTRQTPGNGQKLDLKACENLYASNSIAMNIVDIISEDMVRAGWSLK 80 (461) T ss_pred CccchhhhhhhhhhhhhhhhHHHhhcCCcchhhhhhccccCcccccCHHHHHHHHHhCCccchhhccchHHhhcCCeeee Confidence 443322110 01111111111111100 001 111 1123567778899999999999888774 Q ss_pred ecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC------------ce---eEEEeecCCe Q lcl|Aclame:pro 61 DVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKT------------NQ---ALQFQFYRPS 125 (406) Q Consensus 61 ~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~------------g~---~~~l~~l~p~ 125 (406) ..+. .....+...-+... ..+-+...+....++|.+++++...... +. +..+.|+.+. T Consensus 81 ~~~~------~~~~~~~~~~~~l~-~~~~l~~~~~~~rl~G~a~i~i~v~d~~~~~~~~~~pl~~~~~~~~~~l~~~~~~ 153 (461) T protein:vir:80 81 TDNK------EMKKNIESKWRKLK-TKDRFQKLYADKRLYGDGFLSIGVVSSNREQADLSTAIDPKTIKSIPYINTFNTQ 153 (461) T ss_pred cCCH------HHHHHHHHHHHHhh-HHHHHHHHHHhhcccccEEEEEEeecCCccccCccCCcccccccceeEEEecccc Confidence 3221 11122221111122 2344555666667899999988642111 11 2222233233 Q ss_pred eEEEE---Ec----cCcceEEEEEee------------cCCeEEEEcceeeEeeccCCC-CCccccCHHHHHHHHHHHHH Q lcl|Aclame:pro 126 ETTVE---ET----DNHEIVYTFTDM------------LTAKQVKCFAHDVIHWKFFSH-DTILGRSPLLSLGDEIDLQT 185 (406) Q Consensus 126 ~~~~~---~~----~~g~~~~~~~~~------------~~g~~~~~~~~~vih~r~~~~-~~~~G~s~~~~~~~~i~~~~ 185 (406) .+.+. .+ +.|.+.++.... .....+.+.++.|+||.+.+. +..+|.|.++.+.+.|.... T Consensus 154 ~i~~~~~~~dp~sp~fg~P~~y~i~~~~~~~~~~~~~~~~~~~~~iH~SRii~~~~~~~~~~~~G~S~le~~~~~l~~~~ 233 (461) T protein:vir:80 154 KVTQLYLNQDMFSEHFGEVEFFEVNRVSQLGEEILSGTTASTSEQIHRSRIIHEQGLRFEGETKGRSIFESLYDIITVMD 233 (461) T ss_pred ccchhhhcccCcCcccccceEEEEeccccccccccccccCccceEEccccEEEecCCCCCccccCcchHHHHHHHHHHHH Confidence 22211 11 224443333221 233456789999999987543 55789999999999999999 Q ss_pred HHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 186 GGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTA 265 (406) Q Consensus 186 ~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~ 265 (406) .+......++.+...+......-..+..+......++++.... +.++++++.+-+++.++.+..++ .+..+.... T Consensus 234 ~~~~~~~~l~~~~~~~v~k~~~l~~~~~~~~~~~~~~~~~~~~---~~g~~~~d~~e~~e~~~~~lsgl--~~~l~~~~~ 308 (461) T protein:vir:80 234 TSLWSVGQILYDFAFKVYKTDDIDALNKDDKANLTAMLDFMFR---TEALAIIKGDEQLTKESTNVSGM--KDLLDYGWD 308 (461) T ss_pred HHHHHHHHHHHHhCCCceecchHHhhhchHHHHHHHHHHHhcC---CceEEEEcCCcceEEEecCcCCH--HHHHHHHHH Confidence 9998888877665544332222223344555556666665543 34588899999999988876654 567788888 Q ss_pred HHHHHhcCCHHHhcccccc--hhHHHHHHHHH-------HHHHHHHHHHHHHHHHhhccCccc-----hhhhhhhhcc-- Q lcl|Aclame:pro 266 QIAKALRVPSYKLGVNSPN--QSVAQLMEDYV-------TNDLPFYFDAITSELGLKTLNDKD-----RRLYHIEFDT-- 329 (406) Q Consensus 266 ~Ia~~fgvpp~~lg~~~~~--~n~~~~~~~~~-------~~~i~P~~~~ie~~l~~~l~~~~~-----~~~~~~~~~~-- 329 (406) .||.+-+||...|.+..++ ++.++..+.|+ +..+.|+++.+-+.+-+..+.... ...+.++|+. T Consensus 309 ~iaa~s~iP~t~L~G~s~g~~asge~D~~~yyd~i~~~qe~~l~p~le~l~~~i~~s~~~~~~~~~p~~~~~~i~f~~L~ 388 (461) T protein:vir:80 309 YLAGAVRMPKTVLKGQEAGTLTGAQYDVMNYYARVSSIQENRLRPQLEYLTRLLMWASDDCGPSIDPDSFEWAIEFNPLW 388 (461) T ss_pred HHhhhhcCCeeeeecccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCccccceEEEeCCCC Confidence 9999999999887543333 23343444443 345778888777777654443211 1245556641 Q ss_pred cchh-------HHHHHHHHHHHhCCCcCHHHHHHHh-C---CCCCCCCCCCeeeeccCccchhhccccccccCcccCCCc Q lcl|Aclame:pro 330 RSVT-------GRNVDEIVKLVNNQILTPNQGLVEL-G---KQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE 398 (406) Q Consensus 330 ~~~~-------~~~~~~~~~~~~~g~~t~NE~R~~~-g---~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~ 398 (406) ..+. ++.++++..++++|+++++|+|+.+ + ++|.....|+. .-.+......... .. + T Consensus 389 ~~s~kekAe~~~~~a~a~~~~~~~g~is~~e~r~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~----~ 456 (461) T protein:vir:80 389 NLDSKTDAEVRKLTAEADQIYIVNGVLDPDEVKETRFGRFGLENSSKFSGDS-------AEIDKLAKLVYDA-YA----K 456 (461) T ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCccCCCCC-------chhhhhhhhcccc-cc----c Confidence 1222 2345678889999999999999865 3 33321111110 0111111000100 01 1 Q ss_pred cCCCC Q lcl|Aclame:pro 399 VNAEE 403 (406) Q Consensus 399 ~~~~~ 403 (406) +++++ T Consensus 457 e~~~g 461 (461) T protein:vir:80 457 KNADG 461 (461) T ss_pred cCCCC Confidence 11111 No 120 >protein:vir:107662 Length: 427 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003893;genbank:gi:45686310;genbank:GeneID:2773002 Probab=99.73 E-value=4.1e-18 Score=115.91 Aligned_cols=369 Identities=16% Similarity=0.097 Sum_probs=197.8 Q ss_pred CcccccccCCCCcchhhHHHhhcC-----Ccc-cccch-hhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHH Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAG-----DVS-QKYLG-VSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDIN 73 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~-~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~ 73 (406) |-.|+.- +..+.+.+-..+ ..+ ..+.- .-+.+++.+.++|+.+|+++.+..+++...+.+. .+. T Consensus 1 ~~~~~~d-----~~~~~~~~~~~~~~~~~~~~~~~~~l~a~Y~~~~l~~~~Vd~~aed~~r~g~~i~g~~~~~----~~~ 71 (427) T protein:vir:10 1 MKIVKHD-----GYNDIFNGGADGSPKPFFMSDASYHVGSFYNDNATAKRIVDVIPEEMVTAGFKMSGVKDEK----EFK 71 (427) T ss_pred CCccccc-----hHHHHhhcCCCCcccCccccCchHHHHHHHHcCchhhhhhccchHHhhcCCccccCccHHH----HHH Confidence 5554321 111111000000 000 00111 1134678888999999999999998875322111 111 Q ss_pred HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecC---------CCceeEEEeecCCeeEEEEEcc-------Ccce Q lcl|Aclame:pro 74 YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDP---------KTNQALQFQFYRPSETTVEETD-------NHEI 137 (406) Q Consensus 74 ~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~---------~~g~~~~l~~l~p~~~~~~~~~-------~g~~ 137 (406) ..+. + ....+-+..++....++|.+++++..+. ..|.+..+.+++++.+.+.... .|.+ T Consensus 72 ~~~~-~----l~~~~~l~~a~~~~rl~G~a~i~i~v~d~~~l~~p~~~~g~l~~l~v~d~~~~~~~~~~~dp~s~~fg~P 146 (427) T protein:vir:10 72 SLWD-S----YKLDSSLVDLLCWARLYGGAAMVAIIKDNRMLTSQAKPGAKLEGVRVYDRFAITVEKRVTNARSPRYGEP 146 (427) T ss_pred HHHH-H----hhHHHHHHHHHHhccccceeEEEEEecCCCccccccCCCcceeEEEEechhcccccccccCccccccCcc Confidence 1111 1 1123445556666668999998875321 2467889999998887664332 2455 Q ss_pred EEEEEee-cCCeEEEEcceeeEeeccCC-------CCCccccCHHH-HHHHHHHHHHHHHHHHHHHHhcCCCcceEEe-e Q lcl|Aclame:pro 138 VYTFTDM-LTAKQVKCFAHDVIHWKFFS-------HDTILGRSPLL-SLGDEIDLQTGGINTLIKFFKDGFSSGILTM-K 207 (406) Q Consensus 138 ~~~~~~~-~~g~~~~~~~~~vih~r~~~-------~~~~~G~s~~~-~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~-~ 207 (406) .++.... .....+.+.++.|+||...+ .++++|.|++. .+.+.|............++........-+. . T Consensus 147 ~~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~~k~~~~v~k~~~l 226 (427) T protein:vir:10 147 EIYKVSPGDNMQPYLIHHSRVFIADGERVAQQARKQNQGWGASVLNKSLIDAICDYDYCESLATQILRRKQQAVWKVKGL 226 (427) T ss_pred eEEEEecCCCCcceEEccccEEEecCCCchhhhcccCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHhccccccchhH Confidence 4433333 23344788999999997432 34678999986 5778888888888888887655433322221 1 Q ss_pred cCCCC-HHHHHHHHHHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHh-cccccc Q lcl|Aclame:pro 208 GAQLS-GDARQRARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKL-GVNSPN 284 (406) Q Consensus 208 ~~~~~-~e~~~~~~~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g~~~~~ 284 (406) ...++ .+.....++++...... ++.+.+++...+-+|+.++.+...+ .+.......+||++.+||..+| |.+..+ T Consensus 227 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~e~~e~~~~~lsgl--~~~~~~~~~~iaaa~~IP~t~L~G~sp~G 304 (427) T protein:vir:10 227 AEMCDDDDAQYAARLRLAQVDDNSGVGRAIGIDAETEEYDVLNSDISGV--PEFLSSKMDRIVSLSGIHEIIIKNKNVGG 304 (427) T ss_pred HHHhcCccchHHHHHHHHHHHHhcCcccceeeecCCCceeEEecccCCh--HHHHHHHHHHHHhhhCCCeeeeccCCccc Confidence 11111 12222334444443322 2334566666678899888776654 5667778889999999999987 432222 Q ss_pred --hhHHHHHHHHHH-------HHHHHHHHHHHHHHHhhccCccchhhhhhhhcc--cch-------hHHHHHHHHHHHhC Q lcl|Aclame:pro 285 --QSVAQLMEDYVT-------NDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT--RSV-------TGRNVDEIVKLVNN 346 (406) Q Consensus 285 --~n~~~~~~~~~~-------~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~ 346 (406) ++.+...+.|+. ..+.|.++.+-+.+- .. ..+.++|.. ..+ .++.++++..++++ T Consensus 305 lnstgd~D~~nyyd~i~~~Qe~~l~p~l~~l~~~i~----~s---~~~~~~f~pL~~~s~kEkaei~~~~a~a~~~~~~~ 377 (427) T protein:vir:10 305 VSASQNTALETFYKLVDRKREEDYRPLLEFLLPFIV----DE---EEWSIEFEPLSVPSKKEESEITKNNVESVTKAITE 377 (427) T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----cC---CCcEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhc Confidence 222334444443 445666555443332 11 245566641 111 23456778889999 Q ss_pred CCcCHHHHHHHh----CCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 347 QILTPNQGLVEL----GKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 347 g~~t~NE~R~~~----g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) |+++++|+|+.| +.+.+. +.+....+....... .+...+| ++.|+| T Consensus 378 gvi~~~e~r~~L~~~~~~~~~~---------~~~~~~~e~~~~~~e---~~p~~~e--~~~d~~ 427 (427) T protein:vir:10 378 QIIDLEEARDTLRSIAPEFKLK---------DGNNINIREPEETTE---PEPGLGE--KLEDEN 427 (427) T ss_pred CCCCHHHHHHHHHhhhccccCC---------CCccccccccchhcC---CCCCCCC--CCCCCC Confidence 999999999877 223221 111111111111111 1111122 223333 No 121 >protein:vir:107880 Length: 491 # NCBI annotation: gp29 # Family: family:all:313 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024702;genbank:gi:48696939;genbank:GeneID:2845968 Probab=99.73 E-value=2.9e-16 Score=105.79 Aligned_cols=377 Identities=10% Similarity=-0.036 Sum_probs=225.7 Q ss_pred Cc--ccccccCC------CCcchh------hHHHhhcCCcc-c------------ccchhhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MS--FFQPLGTS------KVSYDD------YISSVLAGDVS-Q------------KYLGVSALKNSDILTATSIIAGDIA 53 (406) Q Consensus 1 M~--~f~~~~~~------~~~~~~------~~~~~~~~~~~-~------------~~~~~~a~~~~~v~~~i~~ia~~ia 53 (406) |. ++..-+.. +.+... ......+.+.+ . ...-+..++.+.|.+|++.+...|. T Consensus 1 m~~~i~~~~g~p~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~iLr~~~~~~~~y~~m~~D~~i~s~l~~Rk~av~ 80 (491) T protein:vir:10 1 MSKGLWVSPTEFVTFGEPDKSLSSQIATRARSIDFFALGMYLPNPDPVLKALGKDIRVYRELRADAHVGGCVRRRKAAVK 80 (491) T ss_pred CCCceeCCCCCccCcccCChHHHHHHHhhhcccccccccCCccchHHHHHhcCCCHHHHHHHhhChHHHHHHHHHHHHHh Confidence 32 22111100 000000 00000000000 0 0000124568889999999999999 Q ss_pred cceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCce--eEEEeecCCeeEEEEE Q lcl|Aclame:pro 54 RFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQ--ALQFQFYRPSETTVEE 131 (406) Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~--~~~l~~l~p~~~~~~~ 131 (406) +++|.|...+.+......+..+|. ++ .+.++++.++ +.+.+|.++.++++...+|. |..+.+.++.++.+. T Consensus 81 ~~~w~i~~~~~~~~~~e~v~e~l~-~~----~~~~~l~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d- 153 (491) T protein:vir:10 81 ALEWGLDRGKAKSRVAKSIADVFA-DL----DLSRIVTEML-DAVLYGYQPMEITWGKVGNYIVPIDVVGKPADWFVYD- 153 (491) T ss_pred CCCcEEecCCCCHHHHHHHHHHHh-cC----CHHHHHHHHH-HhhhhcceeEEEEEeecCCeeEEEEeeeecccceeec- Confidence 999999765444333334444443 33 4667777776 56789999999998766664 568888888877753 Q ss_pred ccCcceEEEEEeecCCeEEEEcceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCC Q lcl|Aclame:pro 132 TDNHEIVYTFTDMLTAKQVKCFAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQ 210 (406) Q Consensus 132 ~~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~ 210 (406) .++.+.+... ........+++...++.++.+.. .++|.|.+..|.-..-......+....+.+.-|.|-.+.+++.. T Consensus 154 -~~~~l~~~~~-~~~~~g~~l~~~k~i~~~~~~~~~~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P~~igky~~~ 231 (491) T protein:vir:10 154 -PENQLRFRSK-DHWMQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSPMLVGKHPRS 231 (491) T ss_pred -cCCceEEecC-CCCCCcceecCCCEEEEEecCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCC Confidence 3455544322 22234456788877777776544 48999999999999999999999999999998999888898888 Q ss_pred CCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccC--Ch-hHHHHHHHHHHHHHHHHHHhcCCHHHhccc----cc Q lcl|Aclame:pro 211 LSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEI--DT-NVLQLITSNNFSTAQIAKALRVPSYKLGVN----SP 283 (406) Q Consensus 211 ~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~--~~-~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~----~~ 283 (406) .++++++++.+.+.++.. + ..++++.|++++-+.. +. ...-|.+..++..++|+++ +||.+ ++ T Consensus 232 a~~~ek~~l~~al~~~~~--~--a~~viP~~~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~------iLGqtlTt~~~ 301 (491) T protein:vir:10 232 ASDGEKNLLLDCLEDMVQ--D--AVAVVPDDSSIEIKEAAGKTGSADVYERLLHFCRGEVSIA------LLGQNQTTEAT 301 (491) T ss_pred CCHHHHHHHHHHHHHHhc--C--cEEEecCCceeEEEecCCCCCChhHHHHHHHHHHHHHHHH------HhhhhcccCcc Confidence 899999999988888743 2 2467778777766543 22 2234777788888888865 45532 12 Q ss_pred chh-HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc------chhhhhhhhcc-cchhHHHHHHHHHHHhCCC-cCHHHH Q lcl|Aclame:pro 284 NQS-VAQLMEDYVTNDLPFYFDAITSELGLKTLNDK------DRRLYHIEFDT-RSVTGRNVDEIVKLVNNQI-LTPNQG 354 (406) Q Consensus 284 ~~n-~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~-~t~NE~ 354 (406) ++. ..+.........+.-.++.|++.+|+ |+.+. ......+.|+. ..+.+.+++.+.++++.|+ ++..++ T Consensus 302 gs~a~~~vh~~v~~di~~~D~~~i~~tln~-li~~l~~~N~~~~~~p~f~~~~~~e~~~~~a~~~~~L~~~G~~i~~~~i 380 (491) T protein:vir:10 302 STRASAQAGLEVTDDIRDGDKAVVSEAMNM-LIRWICDLNFDGADRPVFDMWEQEQVDEIQAGRDQKLTQAGARFTPAYF 380 (491) T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcceEEecCcCchhHHHHHHHHHHHhCCCcCCHHHH Confidence 221 22334445566777788888888885 54321 11122344433 3345678888999999998 899999 Q ss_pred HHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 355 LVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 355 R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) |+.+|+|+-. .+........-.+ ..........+.+++..+.. T Consensus 381 ~e~~Gip~~~--~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~ 423 (491) T protein:vir:10 381 KRAYNLQDGD--LDERPLPVSAVDT-------VGAASFAEFEAPDQDALDAA 423 (491) T ss_pred HHHhCCCCCC--cCccccccCCCCC-------cccccccccCCCCCCchHHH Confidence 9999998742 2322211000000 00000000011111111111 No 122 >protein:vir:1986 Length: 512 # NCBI annotation: Hypothetical protein # Family: family:all:313 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050633;genbank:gi:9633520;genbank:GeneID:2636304 Probab=99.72 E-value=1.9e-16 Score=106.74 Aligned_cols=386 Identities=11% Similarity=-0.002 Sum_probs=226.2 Q ss_pred Ccc-cccccCC--------CC-cchhhHHHhhcCCcccccchh-----------------------hhhccHHHHHHHHH Q lcl|Aclame:pro 1 MSF-FQPLGTS--------KV-SYDDYISSVLAGDVSQKYLGV-----------------------SALKNSDILTATSI 47 (406) Q Consensus 1 M~~-f~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~-----------------------~a~~~~~v~~~i~~ 47 (406) |+- ++.-+.. +. +.-......+.+.++..+++. -.++.+.|.+|++. T Consensus 1 m~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~iL~~a~~gd~~~~~~L~~dm~~~D~hi~s~l~~ 80 (512) T protein:vir:19 1 MGRILDISGQPFDFDDEMQSRSDELAMVMKRTQEHPSSGVTPNRAAQMLRDAERGDLTAQADLAFDMEEKDTHLFSELSK 80 (512) T ss_pred CcceeCCCCCccccccccccccchhcccchhhccccccCCCHHHHHHHHHHhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 763 3221110 00 000001111111122222221 11357789999999 Q ss_pred HHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc--eeEEEeecCCe Q lcl|Aclame:pro 48 IAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN--QALQFQFYRPS 125 (406) Q Consensus 48 ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g--~~~~l~~l~p~ 125 (406) +...|.+++|.|....+........+..+...-+....+.+++..++ +.+.+|-++.++++...+| .|..+.+.+|. T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~~f~~~~~~ll-dA~~~G~s~~Ei~w~~~~g~~~~~~~~~r~~~ 159 (512) T protein:vir:19 81 RRLAIQALEWRIAPARDASAQEKKDADMLNEYLHDAAWFEDALFDAG-DAILKGYSMQEIEWGWLGKMRVPVALHHRDPA 159 (512) T ss_pred HHHHHhCCCceEecCCCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHH-hhhhhcceeeeeEeeeeCCceeeeeeeeeccc Confidence 99999999999976543322222333333222222223556666665 4567999999998865554 56788888888 Q ss_pred eEEEEEccCcceEEEEEeecCCeEEEEcceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceE Q lcl|Aclame:pro 126 ETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGIL 204 (406) Q Consensus 126 ~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~ 204 (406) .+.+..+..+.+.+ . ........+++...+..++.+.. .++|.+.+..|.-..-......+.-..|.+.-|.|-.+ T Consensus 160 ~f~~~~~~~~~lr~--~-~~~~~G~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~yG~P~~i 236 (512) T protein:vir:19 160 LFCANPDNLNELRL--R-DASYHGLELQPFGWFMHRAKSRTGYVGTNGLVRTLIWPFIFKNYSVRDFAEFLEIYGLPMRV 236 (512) T ss_pred cceeccCCCcEEEe--c-CCCCCceeecCCceEEEeccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeE Confidence 88765544433322 1 22223446777766666665544 47999999999999999999999999999998999888 Q ss_pred EeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCC-hhHHHHHHHHHHHHHHHHHHhcCCHHHhcccc- Q lcl|Aclame:pro 205 TMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEID-TNVLQLITSNNFSTAQIAKALRVPSYKLGVNS- 282 (406) Q Consensus 205 ~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~-~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~- 282 (406) .+++...++++++++.+.+.++.+ + ..++++.|++++-+..+ .....|.+..++..++|+++ +||.+. T Consensus 237 gky~~~a~~~ek~~L~~al~~~~~--~--a~~iiP~~~~ie~~ea~~~~~~~y~~li~~~d~~Isk~------iLGqtlT 306 (512) T protein:vir:19 237 GKYPTGSTNREKATLMQAVMDIGR--R--AGGIIPMGMTLDFQSAADGQSDPFMAMIGWAEKAISKA------ILGGTLT 306 (512) T ss_pred EecCCCCCHHHHHHHHHHHHHHhh--C--cEEEecCCceEEEeecCCCCHHHHHHHHHHHHHHHHHH------Hhhhhhc Confidence 888888899999999888888743 2 35677888777666543 23345788889999999976 355321 Q ss_pred -----cchh-HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc--------h--hhhhhhhc--ccchhHHHHHHHHHHH Q lcl|Aclame:pro 283 -----PNQS-VAQLMEDYVTNDLPFYFDAITSELGLKTLNDKD--------R--RLYHIEFD--TRSVTGRNVDEIVKLV 344 (406) Q Consensus 283 -----~~~n-~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~--------~--~~~~~~~~--~~~~~~~~~~~~~~~~ 344 (406) ++++ ..+.........+...++.|++.||+.|+.+.- . ..-.+.|+ -..|++..++.+.++. T Consensus 307 s~~g~~Gs~a~~~vh~ev~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~f~~~e~eDl~~~a~~~~~l~ 386 (512) T protein:vir:19 307 TEAGDKGARSLGEVHDEVRREIRNADVGQLARSINRDLIYPLLALNSDSTIDINRLPGIVFDTSEAGDITALSDAIPKLA 386 (512) T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEecCCChhhHHHHHHHHHHHh Confidence 1222 234455667788889999999999987765320 0 11123443 3456677777777665 Q ss_pred hCCC-cCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCC---CC Q lcl|Aclame:pro 345 NNQI-LTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEED---KS 406 (406) Q Consensus 345 ~~g~-~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~---~~ 406 (406) .|+ ++..++|+.+|+|.-. .++....+.-..|-. ..........++...++.-| .. T Consensus 387 -~G~~i~~~~i~e~~Gip~~~--~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~~~~~ 446 (512) T protein:vir:19 387 -AGMRIPVSWIQEKLHIPQPV--GDEAVFTIQPVVPDN---GSQKEAALSAEDIPQEDDIDRMGVS 446 (512) T ss_pred -cCCCCCHHHHHHHhCCCCCC--CccccccCCCccccc---cccccccccccCCCchhhHhHHhhh Confidence 565 7999999999997542 233222211111100 00000000000000000000 00 No 123 >protein:vir:79538 Length: 502 # NCBI annotation: putative portal protein # Family: family:all:47 # MgeID: mge:1871 # MgeName: cdtI # Cross-refs: genbank:acc:YP_001272517;genbank:gi:148609386;genbank:GeneID:5204374 Probab=99.71 E-value=1.6e-17 Score=112.65 Aligned_cols=401 Identities=10% Similarity=0.011 Sum_probs=213.6 Q ss_pred CcccccccCCCC--------cchhhHHHhhcC-------Ccccccc----------------hhhhhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MSFFQPLGTSKV--------SYDDYISSVLAG-------DVSQKYL----------------GVSALKNSDILTATSIIA 49 (406) Q Consensus 1 M~~f~~~~~~~~--------~~~~~~~~~~~~-------~~~~~~~----------------~~~a~~~~~v~~~i~~ia 49 (406) |||+++.-.-.+ .....+..+-.. ......+ +.-+..++.+.++|+.+. T Consensus 1 mn~~dr~i~~~sP~~~~~R~~ar~~~~~y~aa~~~r~~~~~~~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~ 80 (502) T protein:vir:79 1 MAILDDVIGVFSPGWKAARLRSRAVIQAYEAVKTTRTHKARRENRTADQLSQYGAVSLREQARYLDNNHDLVIGVFDKLE 80 (502) T ss_pred CchHhhHHhhcChHHHHHHHhhHHHHhhccccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH Confidence 999865221100 000001000000 0000000 111346777888898777 Q ss_pred Hhhccc-eeEEE--ecCCcccccchHHH----Hhh---h--hccccCCHHHHHHHHHHHHHhcCCceEEEEecCC----- Q lcl|Aclame:pro 50 GDIARF-PLVKK--DVNGDIIHDEDINY----LLN---V--KSTSNASARTWKFAMAVNAILTGNSFSRILRDPK----- 112 (406) Q Consensus 50 ~~ia~~-~~~~~--~~~~~~~~~~~~~~----lL~---~--~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~----- 112 (406) ..+-.. -+.+. -..........+.. ++. . .....++.+.+...++..++..|++|+.++++.. T Consensus 81 ~nvVG~ggi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~~~~~~ 160 (502) T protein:vir:79 81 ERVVGKNGIIVEPHPVLRNGAIARDLAAEIRTRWSEWSVSPEVTGQFTRPMLERLMLRTWLRDGEVFAQMVSGRINSLTP 160 (502) T ss_pred HhhccCCceeeeeccCCCChhHHHHHHHHHHHHHHHhhcCcCccccCCHHHHHHHHHHHHHhCCceEEEEeecccCccCC Confidence 666532 22221 11111111111211 211 1 2233577889999999999999999999876532 Q ss_pred -CceeEEEeecCCeeEE------------EEEccCcceEEE-EEeec-----CCeEEEEcceeeEeeccCC-CCCccccC Q lcl|Aclame:pro 113 -TNQALQFQFYRPSETT------------VEETDNHEIVYT-FTDML-----TAKQVKCFAHDVIHWKFFS-HDTILGRS 172 (406) Q Consensus 113 -~g~~~~l~~l~p~~~~------------~~~~~~g~~~~~-~~~~~-----~g~~~~~~~~~vih~r~~~-~~~~~G~s 172 (406) .+.+..+..|+|+.+. +..+..|.++.| +.... ......+|+++|+|+...- .....|+| T Consensus 161 g~~~~l~lq~iepd~l~~~~~~~~~i~~GVe~d~~Gr~~aY~i~~~hPgd~~~~~~~rvpA~~vlH~f~~~r~gQ~RGis 240 (502) T protein:vir:79 161 SAGVHFWLEALEPDFIPMTSDESNRLNQGVFVDDWGRPEKYLVYKSRPVSGRQMETKEVDAERMLHLKFVRRLHQMRGTS 240 (502) T ss_pred CcccceEEEEecchhcCCCCCCCCeeEeeeEECCCCceEEEEEeecCCCCCcccceeEechhheEEeecccCCccccCCc Confidence 2346788888887764 334555655433 33222 2234678999999998654 45689999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCcee-eccCCceeeeccCCh Q lcl|Aclame:pro 173 PLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPL-VFDSTMEYTPLEIDT 251 (406) Q Consensus 173 ~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~-vl~~g~~~~~l~~~~ 251 (406) .+..+...+.......+......+-.+...++++......... +..-..-......-..|.++ .|..|.+++..+.+- T Consensus 241 ~lapvl~~l~~l~~~~dael~~a~i~A~~~~fi~~~~~~~~~~-~~~~~~~~~~~~~l~pG~i~~~L~pGe~i~~~~p~~ 319 (502) T protein:vir:79 241 LLSGVLIRLSALKEYEDSELTAARIAAALGMYIRKGDGQSYEP-DGNGSKENERELTIQPGIIYDDLKPGEEIGMVKSDR 319 (502) T ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCccccc-ccCCCCCccccccccCCccccccCCCceeeeeCCCC Confidence 9999999888777777666666555566666665433211110 00000000000111234444 589999999988776 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHH-----------HHHHHHHHHHHHHHHH-HHHHHHHhhccCc Q lcl|Aclame:pro 252 NVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVA-----------QLMEDYVTNDLPFYFD-AITSELGLKTLND 317 (406) Q Consensus 252 ~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~-----------~~~~~~~~~~i~P~~~-~ie~~l~~~l~~~ 317 (406) ....|.+..+...+.||+.+|||.+.|.. +.+||++. ..+..|....++|+.+ .+++++-...++. T Consensus 320 p~~~~~~f~~~~lr~iaaglGi~ye~lt~D~s~nySs~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~~l~~a~l~G~i~~ 399 (502) T protein:vir:79 320 PNPNLETFRNGQLRAVAAGSRLSFSSTARNYNGTYSAQRQELVESTDGYLILQDWFIGAVTRPMYRAWLKQAVASGVIRL 399 (502) T ss_pred CCCCHHHHHHHHHHHHHhhcCCCHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC Confidence 66788899999999999999999988853 33555432 2223455556666444 3555554444332 Q ss_pred cc---hh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC--------CCCeeeeccCccchh Q lcl|Aclame:pro 318 KD---RR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDP--------NMDRYQSSLNYVFLD 381 (406) Q Consensus 318 ~~---~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~--------~gd~~~~~~n~~~~~ 381 (406) .. .. .+.+.+-. ..|..+.+++....+++|+.|.-|+-...|.+|-..- -.+++=++....|.. T Consensus 400 p~~~~~~~~~~~~W~~p~~~~iDP~Ke~~a~~~~i~~Gl~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~~~ 479 (502) T protein:vir:79 400 PRDLDRSSLYTAVYSGPVMPWIDPVKEAEAWKIQIRGGAATESDWVRAGGRNPDDVKRRRKAEIDENRKLDLVFDTDPAS 479 (502) T ss_pred CCCCCchhhcceeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCC Confidence 11 11 11222211 2367788888899999999999998888898864110 001111222222211 Q ss_pred hcccccc--ccCcccCCCccCCCCC Q lcl|Aclame:pro 382 KKEEYQD--KVGIKGKGGEVNAEED 404 (406) Q Consensus 382 ~~~~~~~--~~~~~~~gg~~~~~~~ 404 (406) ....... ....+..+++ ++++ T Consensus 480 ~~~~~~~~~~~~e~~~~~~--~~e~ 502 (502) T protein:vir:79 480 DKGGSSAATKRQEPQHTDD--QSEE 502 (502) T ss_pred CCCCCCCCCCCCCCCCCCC--CCCC Confidence 1111011 1111111111 1111 No 124 >protein:vir:98816 Length: 446 # NCBI annotation: hypothetical protein # Family: family:all:32558 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851097;genbank:gi:117530254;genbank:GeneID:4484480 Probab=99.64 E-value=4.7e-16 Score=104.59 Aligned_cols=359 Identities=12% Similarity=0.060 Sum_probs=210.5 Q ss_pred Ccc--cc-ccc---CCCCcch---hhHHHhh---------cCCcccc-cchhhhh-ccHHHHHHHHHHHHhhccceeEEE Q lcl|Aclame:pro 1 MSF--FQ-PLG---TSKVSYD---DYISSVL---------AGDVSQK-YLGVSAL-KNSDILTATSIIAGDIARFPLVKK 60 (406) Q Consensus 1 M~~--f~-~~~---~~~~~~~---~~~~~~~---------~~~~~~~-~~~~~a~-~~~~v~~~i~~ia~~ia~~~~~~~ 60 (406) |+. -+ +.. ....+.. ....+++ ++..... ..-..++ +.+.|.+|++.+...|.+++|.|. T Consensus 1 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~~~D~~lr~~gg~~~~~~~l~~~m~e~D~~v~s~l~~Rk~av~~~~w~V~ 80 (446) T protein:vir:98 1 MNMEVRNAPTPAIRRRTIYAMEHLGLATSYLSEDGGYKRAGKPTYQQLSAWDEAAQTEPIIAQGLDSIALSVLNKVGPYQ 80 (446) T ss_pred CcccccCCCchhhhhhhhhccccchhhcccCCcchHhhhcCCChHHHHHHHHHHHhcchHHHHHHHHHHHHhhcCCceec Confidence 443 11 100 0000000 0011111 1111010 0111233 478899999999999999999996 Q ss_pred ecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCce--eEE----EeecCCeeEEEEEccC Q lcl|Aclame:pro 61 DVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQ--ALQ----FQFYRPSETTVEETDN 134 (406) Q Consensus 61 ~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~--~~~----l~~l~p~~~~~~~~~~ 134 (406) ..+++ .-..+..+|.... .++....+.+.+.+|-++.++++....|. |.. +....|..+....+.+ T Consensus 81 p~~~~--~a~~v~~~l~~~~------~~~~~~~~ldai~~G~s~~Eivw~~~~g~~~p~~~~d~~~~~~~~~~r~~~~~~ 152 (446) T protein:vir:98 81 HGDKR--IKKFIDDQLRNRA------KTWISHCVKSIMTYGFSLSEQIYAHGARDNMPATVLDDIVNYHPLQVMLIANDN 152 (446) T ss_pred CccHH--HHHHHHHHHhhcC------chhHHHHHHHHHhhCceeeeEEEeecccccccchhhccccccccccceeeeccC Confidence 54322 1223344443221 24455557888999999999998654432 211 1112222222222222 Q ss_pred cceEEE-------------------------EEeecCCeEEEEcceeeEeeccCCCCC-ccccCHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 HEIVYT-------------------------FTDMLTAKQVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGI 188 (406) Q Consensus 135 g~~~~~-------------------------~~~~~~g~~~~~~~~~vih~r~~~~~~-~~G~s~~~~~~~~i~~~~~~~ 188 (406) +.+... ......|....+|....+++++.+..+ ++|.|.+..|.-..-...... T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~iP~~kfi~~~~~~~~~~p~G~gLlr~~~w~~~fK~~~~ 232 (446) T protein:vir:98 153 GRIVDGDTVTASQYKSGYWVPLPPYRIGDPPKKVDVVGSHVRLPSHKRLFINYNTKGNNPWGTSCLTSVLDYSIFKRAFR 232 (446) T ss_pred CccccccccchhhcccccccCcccchhhhhhhhcccCcccccccccceEEEEecCCCCCccccchHHHHHHHHHHHHhhH Confidence 221100 011123334567888988988876554 899999999999999999999 Q ss_pred HHHHHHHhcCCCcceEEeecCCCCHHHH------HH---HHHHHHHHhcc--cccCcee---eccCCceeeeccCChh-H Q lcl|Aclame:pro 189 NTLIKFFKDGFSSGILTMKGAQLSGDAR------QR---ARQEFEKMREG--SVGGSPL---VFDSTMEYTPLEIDTN-V 253 (406) Q Consensus 189 ~~~~~~~~ng~~~~~~~~~~~~~~~e~~------~~---~~~~~~~~~~g--~~~~~~~---vl~~g~~~~~l~~~~~-d 253 (406) +.-..+.+.-+.|--+.+.+...++++. +. ..+.+-++... .+++.++ +++.|++++-+..... . T Consensus 233 ~~w~~f~E~yG~P~~vGkyp~ga~~~~~~~~~~~~~~~~~~~~L~~av~~~~~da~~ii~~~~~P~g~eie~~ea~~~~~ 312 (446) T protein:vir:98 233 DMMLIALDRYGTPLIYVIVPPGNTGVVEEAPDGTEITTTIAEQAEDALRRLSTDSGLVLTQLSKEQPVQVGALTTGNNFS 312 (446) T ss_pred HHHHHHHhHcCCceeEEeecCCCCcccccchhHHHHHHHHHHHHHHHHHhccccceeeeecccCCCCceEEeeccccCCh Confidence 9999999998888878877665443322 11 22334444422 2222222 2388998887765322 2 Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHhcccc--cchhH-HHHHHHHHHHHHHHHHHHHHHHHHhhccCcc--------chh- Q lcl|Aclame:pro 254 LQLITSNNFSTAQIAKALRVPSYKLGVNS--PNQSV-AQLMEDYVTNDLPFYFDAITSELGLKTLNDK--------DRR- 321 (406) Q Consensus 254 ~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~--~~~n~-~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~--------~~~- 321 (406) ..|.+..++..++|+++.....-.+|... .+++. .+.........+.-.+++|++.+|+.|+.+- ... T Consensus 313 ~~~~~~i~~~d~~IskaiLg~~Ltl~~~~~~~GS~ala~vh~~V~~d~~~aDa~~i~~tln~~Li~~l~~lNf~~~~~~~ 392 (446) T protein:vir:98 313 DSFERAISLCDNNMLMGMGIPNLLVQNRETTFGTGRASEIQLELFDGKINSIFDTVIHAFTEQVIGNLIRLNFDPALYPL 392 (446) T ss_pred hhHHHHHHHHHHHHHHHHhcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc Confidence 35788889999999998877765665432 23322 3334456677788999999999998775421 100 Q ss_pred ---hhhhhhc--ccchhHHHHHHHHHHHhCCCcCH---HHHHHHhCCCCCCCCCC Q lcl|Aclame:pro 322 ---LYHIEFD--TRSVTGRNVDEIVKLVNNQILTP---NQGLVELGKQKSTDPNM 368 (406) Q Consensus 322 ---~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~---NE~R~~~g~~p~~~~~g 368 (406) .-.++|+ -..|+++.++.+.++++.|+.++ +.+|+.+|+|+-++ .- T Consensus 393 ~~~~~~~~~~~~e~eDl~~~a~~~~~L~~~G~~~p~~~~~ire~~giP~~~~-~~ 446 (446) T protein:vir:98 393 ASNTGYITRLPGRATDLAALVEAIKQMHDMGFLVDGDKDHIRSITGLPDAIS-ST 446 (446) T ss_pred ccccccceeccCChhhHHHHHHHHHHHHhCCccccccHHHHHHHhCcCCCCC-CC Confidence 0122333 34578888999999999998764 55999999987643 22 No 125 >protein:vir:96738 Length: 505 # NCBI annotation: putative phage-related protein # Family: family:all:47 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039817;genbank:gi:126010916;genbank:GeneID:5076248 Probab=99.63 E-value=4.5e-16 Score=104.74 Aligned_cols=396 Identities=11% Similarity=-0.005 Sum_probs=215.6 Q ss_pred CcccccccCCCC------------cch-----hhHHHhh--cCCcc--c----------ccchhhhhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MSFFQPLGTSKV------------SYD-----DYISSVL--AGDVS--Q----------KYLGVSALKNSDILTATSIIA 49 (406) Q Consensus 1 M~~f~~~~~~~~------------~~~-----~~~~~~~--~~~~~--~----------~~~~~~a~~~~~v~~~i~~ia 49 (406) |++.++.-+... .++ .....|. ....+ . .-...-+..++.+.++|+.+. T Consensus 8 ~~~~dr~i~~~~~~~~~~~~~~~~~y~aa~~~r~~~~w~~~~~~~s~~~~i~~~~~~lr~RaRdL~rNn~~a~~av~~~~ 87 (505) T protein:vir:96 8 PSLAQRMVNWAWYRYVEPQKNAARAFEAARRDRLGKAWLRRASRLSADEEIYADLASLVQRAREQSINNPYAKRFYQLLK 87 (505) T ss_pred cchhhcccchhhhhhHHHHHHhhhhcccccCCCccccccCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH Confidence 777655322100 000 0000110 00000 0 001111346777888899777 Q ss_pred Hhhcc-ceeEEEec-C-CcccccchHHH-------Hhhhhcc----ccCCHHHHHHHHHHHHHhcCCceEEEEecCCCce Q lcl|Aclame:pro 50 GDIAR-FPLVKKDV-N-GDIIHDEDINY-------LLNVKST----SNASARTWKFAMAVNAILTGNSFSRILRDPKTNQ 115 (406) Q Consensus 50 ~~ia~-~~~~~~~~-~-~~~~~~~~~~~-------lL~~~Pn----~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~ 115 (406) ..+-. .-+...-. + .....+..+.. ..-.++| -.++.+++...++..++..|++|+.+++...+.. T Consensus 88 ~nvVG~~Gi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~~~~~~~~ 167 (505) T protein:vir:96 88 NNVIGPKGMTFQSRVKRRNGKPDDRANTLIEGNWQQWIKKGNCDVTGRYHFVTLLHLWMETLARDGEVLVREHRGYPNKW 167 (505) T ss_pred HHhcCCCcceeeecCCcccccccHHHHHHHHHHHHHhcCCcCcceeccCCHHHHHHHHHHHHhhCCceEEEEeecCCCCc Confidence 76653 34433211 1 11111111222 2223444 3366888899999999999999998887655455 Q ss_pred eEEEeecCCeeEEE----------------EEccCcceE-EEEEeecCC-----------eEEEEcceeeEeeccCC-CC Q lcl|Aclame:pro 116 ALQFQFYRPSETTV----------------EETDNHEIV-YTFTDMLTA-----------KQVKCFAHDVIHWKFFS-HD 166 (406) Q Consensus 116 ~~~l~~l~p~~~~~----------------~~~~~g~~~-~~~~~~~~g-----------~~~~~~~~~vih~r~~~-~~ 166 (406) +..+..|.|+.+.. ..+..|.++ |++.....| ....+++++|+|+...- .. T Consensus 168 ~~~lqliepd~l~~~~n~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~hPgd~~~~~~~~~~~~~rvpa~~vlH~f~~~r~g 247 (505) T protein:vir:96 168 GYALQILECDRLDLNYNADLQNGNRIRMSIELDAWERPVAYHLLVNHPGDNSYCYHYAGQTYERVPADEIIHTFVPWRPH 247 (505) T ss_pred ceEEEEechhhcCCCCCcccCCcCeEEeceEECCCCceEEEEEeecCCCccccccccccccccccCHhHhhhhhcccCCc Confidence 67788887777632 233445443 333322211 23458889999998653 45 Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeee Q lcl|Aclame:pro 167 TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTP 246 (406) Q Consensus 167 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~ 246 (406) ...|+|.+..+...+.......+......+-.+...++++.+.......... .-......-..|.+..|..|.+++. T Consensus 248 Q~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~---~~~~~~~~l~pG~i~~L~pGe~i~~ 324 (505) T protein:vir:96 248 QNRGIPWTHASMVELHHIGEYRKSEMIAAELGAKKVGFYEQDPEAYDQPPED---DQGEIVEEVEAGTYQLLPYGIRFKE 324 (505) T ss_pred cccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCccCCCcccc---ccCccccccCCceeeecCCCCeeee Confidence 6899999999988888777777666665555556666665433211110000 0000111113455778999999999 Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhc-c--cccchhH-----------HHHHHHHHHHHHHHHHH-HHHHHHH Q lcl|Aclame:pro 247 LEIDTNVLQLITSNNFSTAQIAKALRVPSYKLG-V--NSPNQSV-----------AQLMEDYVTNDLPFYFD-AITSELG 311 (406) Q Consensus 247 l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg-~--~~~~~n~-----------~~~~~~~~~~~i~P~~~-~ie~~l~ 311 (406) ++.+-....|.+..+...+.||+.+|||.+.|- . ..+||++ +..+..|....++|+.+ .+++++- T Consensus 325 ~~~~~p~~~~~~f~~~~lr~iaaglgi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~~l~~a~l 404 (505) T protein:vir:96 325 HKIDHPHTNFGAFVKSSLRGVAAGMGPAYNRLAHDLEGVNFSSLRSGELDERDLYKLLQFFVVTELLERVAGNLISMSLL 404 (505) T ss_pred eCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 988766678899999999999999999999884 3 2356543 23333455566777554 4565555 Q ss_pred hhccCccch--h-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCee------eeccCcc Q lcl|Aclame:pro 312 LKTLNDKDR--R-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRY------QSSLNYV 378 (406) Q Consensus 312 ~~l~~~~~~--~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~------~~~~n~~ 378 (406) ...++.... . ...+.+.. ..|..+.+++....+++|+.|.-|+-...|.++- +.-+.+ +.-.++. T Consensus 405 ~G~i~~p~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~t~~~~~a~~G~D~~--~v~~q~a~e~~~~~~~Gl~ 482 (505) T protein:vir:96 405 TQALPLNMVDIDRLSQYAFQPRGWDWVDPAKDSKAHSESIKNRTRSRSSIIRAAGDDPE--DVFDEIAWEEQLMRDKGVN 482 (505) T ss_pred cCCcCCCCccchhhceeeeccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHH--HHHHHHHHHHHHHHHcCCC Confidence 444432211 1 11222221 2367788889999999999999998888898874 211111 1111221 Q ss_pred chhhccccccccCcccCCCccCCCCCC Q lcl|Aclame:pro 379 FLDKKEEYQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 379 ~~~~~~~~~~~~~~~~~gg~~~~~~~~ 405 (406) +..... . ..+.....++++..|+ T Consensus 483 ~~~~~~---~-~~~~~~~~~~~~~~d~ 505 (505) T protein:vir:96 483 PTPPEQ---E-SKDATTDEEDDSASDD 505 (505) T ss_pred CCCCCC---C-CCCCCCCCCCCCCCCC Confidence 111000 0 0011111111111111 No 126 >protein:vir:3420 Length: 533 # NCBI annotation: capsid component # Family: family:all:47 # MgeID: mge:70 # MgeName: lambda # Cross-refs: genbank:acc:NP_040583;genbank:gi:9626247;genbank:GeneID:2703526 Probab=99.57 E-value=4.3e-15 Score=99.37 Aligned_cols=401 Identities=9% Similarity=-0.008 Sum_probs=210.5 Q ss_pred Ccccccc------cCC---------CCcchhhHHHhhcCCccc------------ccchhhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MSFFQPL------GTS---------KVSYDDYISSVLAGDVSQ------------KYLGVSALKNSDILTATSIIAGDIA 53 (406) Q Consensus 1 M~~f~~~------~~~---------~~~~~~~~~~~~~~~~~~------------~~~~~~a~~~~~v~~~i~~ia~~ia 53 (406) |--+... .+. ..+.+..+..|.....+. .-...-+..++.+.+||+.+...+- T Consensus 3 ~p~~~~~~~~~~~~~~~~~~~y~~~a~~~~~~~~~w~p~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~nvV 82 (533) T protein:vir:34 3 TPTIPTLLGPDGMTSLREYAGYHGGGSGFGGQLRSWNPPSESVDAALLPNFTRGNARADDLVRNNGYAANAIQLHQDHIV 82 (533) T ss_pred CchhhhhhcccccchHHHHHhhhhccCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhh Confidence 1111100 000 000111111111111110 0111223467778889998888875 Q ss_pred cceeEEEec--------CCc--ccccchHHHH---hhhhcc------ccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc Q lcl|Aclame:pro 54 RFPLVKKDV--------NGD--IIHDEDINYL---LNVKST------SNASARTWKFAMAVNAILTGNSFSRILRDPKTN 114 (406) Q Consensus 54 ~~~~~~~~~--------~~~--~~~~~~~~~l---L~~~Pn------~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g 114 (406) .-.+.+.-. +++ ......+..+ .-.+|+ -.++.+++...++..++..|++|+.+.+....| T Consensus 83 G~Gi~~~~~p~~~~lg~~~~~~~~~~~~ie~~w~~w~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~~g 162 (533) T protein:vir:34 83 GSFFRLSHRPSWRYLGIGEEEARAFSREVEAAWKEFAEDDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQATWDTSSS 162 (533) T ss_pred CCCceeeeccchhhcCCChhHHHHHHHHHHHHHHHhhcCccceeccccccCHHHHHHHHHHHHHhCCceEEEeeeccCCC Confidence 555554321 111 1111122122 222333 346788999999999999999999988765555 Q ss_pred e--eEEEeecCCeeEEE--------------EEccCcceE-EEEEeec-CC----------eEEEEcceeeEeeccCC-C Q lcl|Aclame:pro 115 Q--ALQFQFYRPSETTV--------------EETDNHEIV-YTFTDML-TA----------KQVKCFAHDVIHWKFFS-H 165 (406) Q Consensus 115 ~--~~~l~~l~p~~~~~--------------~~~~~g~~~-~~~~~~~-~g----------~~~~~~~~~vih~r~~~-~ 165 (406) . +..+..|.|+.+.. ..+..|.++ |++.... .+ ....++..+|+|+...- . T Consensus 163 ~~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~VlH~f~~~r~ 242 (533) T protein:vir:34 163 RLFRTQFRMVSPKRISNPNNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQKWTWIPRELPGGRASFIHVFEPVED 242 (533) T ss_pred CccceEEEEechhhcCCCCCCCCCCceEeeeEECCCCCeEEEEEeecCCCCccccccceeeeeeccChhHeeeeccccCC Confidence 4 45777777766542 233444433 3333221 11 12335678999998654 4 Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCC-----------CHHHHHHH---HHHHHHHhcc-- Q lcl|Aclame:pro 166 DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQL-----------SGDARQRA---RQEFEKMREG-- 229 (406) Q Consensus 166 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-----------~~e~~~~~---~~~~~~~~~g-- 229 (406) ....|+|.+..+...+.......+......+-.+.-.++++.+... ..++.+.+ ...-...+.+ T Consensus 243 gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (533) T protein:vir:34 243 GQTRGANVFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGANSQEQRERLTGWIGEIAAYYAAAP 322 (533) T ss_pred CcccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeeecCCCcccccccccCCCcccccccccccchhhhhccCcce Confidence 5689999999998888877776666665555555555555533211 11111111 1111111111 Q ss_pred --cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhc-c--cccchhH-----------HHHHHH Q lcl|Aclame:pro 230 --SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLG-V--NSPNQSV-----------AQLMED 293 (406) Q Consensus 230 --~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg-~--~~~~~n~-----------~~~~~~ 293 (406) -..|.+..|..|.+++.++.+-....|.+..+...+.||+.+|||.+.|- . ..+||++ +..+.. T Consensus 323 ~~l~pG~i~~L~pGe~i~~~~~~~p~~~~~~f~~~~lr~iAaglGi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~ 402 (533) T protein:vir:34 323 VRLGGAKVPHLMPGDSLNLQTAQDTDNGYSVFEQSLLRYIAAGLGVSYEQLSRNYAQMSYSTARASANESWAYFMGRRKF 402 (533) T ss_pred eeccCceeeecCCCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHH Confidence 12355777999999999888766678889999999999999999999884 3 2356554 223334 Q ss_pred HHHHHHHHHHH-HHHHHHHhhccCccchh----------hhhhhhc----ccchhHHHHHHHHHHHhCCCcCHHHHHHHh Q lcl|Aclame:pro 294 YVTNDLPFYFD-AITSELGLKTLNDKDRR----------LYHIEFD----TRSVTGRNVDEIVKLVNNQILTPNQGLVEL 358 (406) Q Consensus 294 ~~~~~i~P~~~-~ie~~l~~~l~~~~~~~----------~~~~~~~----~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~ 358 (406) |....+.|+.+ .+++++....++..... ...+.+- .-.|..+.+++....+++|+.|.-|+-... T Consensus 403 ~~~~~~~pi~~~wl~~ail~G~i~~p~~~~~~~~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~s~~~~~a~~ 482 (533) T protein:vir:34 403 VASRQASQMFLCWLEEAIVRRVVTLPSKARFSFQEARSAWGNCDWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECAKR 482 (533) T ss_pred HHHHHHHHHHHHHHHHHHHcCcccCCCccCCCchhhHHhhhceeeccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHc Confidence 55555566544 45555555444322110 0112221 123677888889999999999999998888 Q ss_pred CCCCCCCCCCCeee------eccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 359 GKQKSTDPNMDRYQ------SSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 359 g~~p~~~~~gd~~~------~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) |.++- +.-+.+- .-.++.+ +... ...........+++.++|.. T Consensus 483 G~D~~--ev~~q~a~e~~~~~~~gl~~-~~~~--~~~~~s~~~~~~~~~~~~~~ 531 (533) T protein:vir:34 483 GDDYQ--EIFAQQVRETMERRAAGLKP-PAWA--AAAFESGLRQSTEEEKSDSR 531 (533) T ss_pred CCCHH--HHHHHHHHHHHHHHhcCCCC-CCCC--CcCccCCCCCCCCCCcccCC Confidence 98874 2111110 0011110 0000 00000011111222222222 No 127 >protein:vir:95542 Length: 548 # NCBI annotation: Putative portal protein # Family: family:all:47 # MgeID: mge:1574 # MgeName: F10 # Cross-refs: genbank:acc:YP_001293348;genbank:gi:148912769;genbank:GeneID:5228194 Probab=99.54 E-value=6.7e-15 Score=98.30 Aligned_cols=404 Identities=9% Similarity=-0.015 Sum_probs=210.2 Q ss_pred CcccccccCCCCcc--------hhhHHHhhcCC-------cccccch----------------hhhhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MSFFQPLGTSKVSY--------DDYISSVLAGD-------VSQKYLG----------------VSALKNSDILTATSIIA 49 (406) Q Consensus 1 M~~f~~~~~~~~~~--------~~~~~~~~~~~-------~~~~~~~----------------~~a~~~~~v~~~i~~ia 49 (406) ||||++...--++. ...+..+-..+ +....+. .-+..++.+..+|+.+. T Consensus 1 Mn~iDr~i~~~sP~~a~~R~~ar~~~~~y~aa~~~r~~~~~~~~~s~~~~i~~~~~~lr~RaRdL~rNn~~a~~av~~~~ 80 (548) T protein:vir:95 1 MNLIDRLLEPLAPELVARRLAAREAIQAYEAARPGRTHKAKRQPLGADTSLQKSAVSMREQCRKLDEDHDLVTGLLDRLE 80 (548) T ss_pred CchHHhHhhhcchHHHHHHHHhHHHhccccccCccccccccCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH Confidence 99997643311110 00111110000 0011111 11235677788888776 Q ss_pred Hhhcc---ceeEEEecCCcccccchHHH-------Hhhhh--ccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC---- Q lcl|Aclame:pro 50 GDIAR---FPLVKKDVNGDIIHDEDINY-------LLNVK--STSNASARTWKFAMAVNAILTGNSFSRILRDPKT---- 113 (406) Q Consensus 50 ~~ia~---~~~~~~~~~~~~~~~~~~~~-------lL~~~--Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~---- 113 (406) ..+-. +.+.-.-.+.+......+.. ..-.+ ..-.++.+++...++..++..|++|+.+.++... T Consensus 81 ~nvVG~~G~~i~p~~l~~d~~~a~~l~~~ie~~w~~Wa~~~D~~g~~~f~~lq~l~~R~~~~dGE~f~~~~~~~~~~~~~ 160 (548) T protein:vir:95 81 ERVVGGSGIGVEPLPLRLDGSVHAELAMEIRSAWAEWSLSPETSGELTRPQVERLMCRTWLRDGEGLAQKLMGRVPNYTF 160 (548) T ss_pred HhccCccccceeeeecCCCHHHHHHHHHHHHHHHHHhhcCccccccCCHHHHHHHHHHHHHhCCceEEEeeecccccccC Confidence 66543 22221111111111111111 11122 2334778899999999999999999988775432 Q ss_pred --ceeEEEeecCCeeEEE-------------EEccCcceE-EEEEeecCC---------eEEEEcceeeEeeccCC-CCC Q lcl|Aclame:pro 114 --NQALQFQFYRPSETTV-------------EETDNHEIV-YTFTDMLTA---------KQVKCFAHDVIHWKFFS-HDT 167 (406) Q Consensus 114 --g~~~~l~~l~p~~~~~-------------~~~~~g~~~-~~~~~~~~g---------~~~~~~~~~vih~r~~~-~~~ 167 (406) ..+..+..|.|+.+.. ..+..|..+ |++.....| ....+++++|+|+...- ... T Consensus 161 g~~~~~~lqliepd~l~~~~~~~~~~i~~GIE~D~~Grp~aY~i~~~hPgd~~~~~~~~~~~rvpA~~VlHif~~~r~gQ 240 (548) T protein:vir:95 161 ATSVPFALELLEPDYLPFSYNNLSKGIVQGIERDTWRRKRAYHLLKDHPGNLQTLGGSLAVKRVEAERIIHIAYRKRIGQ 240 (548) T ss_pred CcccceEEEEechhhcCCCCCCCCCceeeeeEECCCCceEEEEEeecCCCcccccccccceeeechhHheecccccCCcc Confidence 2456788888876632 233344433 444433222 35678999999998654 446 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCcee-eccCCceeee Q lcl|Aclame:pro 168 ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPL-VFDSTMEYTP 246 (406) Q Consensus 168 ~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~-vl~~g~~~~~ 246 (406) ..|+|.+..+...+.......+......+-.+...++++....... ..+.....-... ..-..|.++ .|..|.+++. T Consensus 241 ~RGvs~lapvl~~l~~l~~y~dael~~aki~A~~a~fi~~~~~~~~-~~~~~~~~~~~~-~~~~pG~iv~~L~pGe~i~~ 318 (548) T protein:vir:95 241 NRGVPMLHAVLIRLADLKDYEESERVAARISAALAMYIKKGNPDSY-TVEPGKDRKNRT-IPIAPGMVFDDLEPGEDVGM 318 (548) T ss_pred ccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCccc-cCCCCccccccc-ccccCCccccccCCCceeee Confidence 8999999999888887777776666655555556666654322111 000000000000 001123333 5889999999 Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc--cccchhHH-----------HHHHHHHHHHHHHHHH-HHHHHHHh Q lcl|Aclame:pro 247 LEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVA-----------QLMEDYVTNDLPFYFD-AITSELGL 312 (406) Q Consensus 247 l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~--~~~~~n~~-----------~~~~~~~~~~i~P~~~-~ie~~l~~ 312 (406) ++.+-....|.+..+...+.||+.+|||.+.|-. +.+||++. ..+..|....++|+.+ .+++++-. T Consensus 319 ~~p~~p~~~~~~f~~~~lr~IAaglGipYe~ltgD~s~nYSS~R~~l~e~~r~~~~~q~~~i~~~~~Pi~~~wle~a~l~ 398 (548) T protein:vir:95 319 IESNRPNPFLEGFRNGQLRMIGAGTRSTYSSVSRAYDGTYSAQRQELVEGWLGYDLLQHEFIDYWCRPVYRSWLQMYLLA 398 (548) T ss_pred cCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc Confidence 8877566778899999999999999999888843 33555532 2223445556666433 45555544 Q ss_pred hccCccc---hh-hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC--------CCCeeeeccC Q lcl|Aclame:pro 313 KTLNDKD---RR-LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDP--------NMDRYQSSLN 376 (406) Q Consensus 313 ~l~~~~~---~~-~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~--------~gd~~~~~~n 376 (406) -.++... .. .+.+.+.. ..|..+.+++....+++|+.|.-|+-.+.|.+|-.-- ..+++=++.. T Consensus 399 G~i~lP~~~~~~~~~~~~W~~P~~~~iDP~Kea~A~~~~i~~Gl~T~~~~~a~~G~D~~ev~~q~a~E~~~~~~~GL~~~ 478 (548) T protein:vir:95 399 RKERLPADVDHRTLYAAVYQGPVMPWINPMHEANAWELLVKAGFADEAEVARARGRDPRELKKSRETEIKANRAAGLVFS 478 (548) T ss_pred CCcCCCCCCCchhheeeeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCCC Confidence 3332211 11 12222211 2367788888999999999999988888888763210 0001111111 Q ss_pred ccchhh----ccccccccCcccCC------CccCCCCCCC Q lcl|Aclame:pro 377 YVFLDK----KEEYQDKVGIKGKG------GEVNAEEDKS 406 (406) Q Consensus 377 ~~~~~~----~~~~~~~~~~~~~g------g~~~~~~~~~ 406 (406) ..|... ........+....| ||+-+++-.+ T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (548) T protein:vir:95 479 SDAYHQLVKSGMDPVEAVQKVYLGVGKMLTADEARELVNR 518 (548) T ss_pred CcccccccccccCCCCchhhhccccccccccchhHHhhcc Confidence 111110 00000111111111 2221111112 No 128 >protein:vir:389 Length: 530 # NCBI annotation: gp4 # Family: family:all:47 # MgeID: mge:325 # MgeName: N15 # Cross-refs: genbank:acc:NP_046899;genbank:gi:9630468;genbank:GeneID:1261643 Probab=99.53 E-value=8.3e-15 Score=97.78 Aligned_cols=402 Identities=10% Similarity=-0.018 Sum_probs=210.9 Q ss_pred CcccccccCCC--------------CcchhhHHHhhcCCccc------------ccchhhhhccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MSFFQPLGTSK--------------VSYDDYISSVLAGDVSQ------------KYLGVSALKNSDILTATSIIAGDIAR 54 (406) Q Consensus 1 M~~f~~~~~~~--------------~~~~~~~~~~~~~~~~~------------~~~~~~a~~~~~v~~~i~~ia~~ia~ 54 (406) |..=.-.+-.. .+....+..|.....+. .-.+.-+..++.+.+||+.+...+-. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~w~~~~~s~~~~i~~~~~~lr~RaRdl~rNn~~a~~av~~~~~nvVG 80 (530) T protein:vir:38 1 MKIPSLVGPDGKTSLREYAGYHGGGGGFGGQLRGWNPPSESADAALLPNYSRGNARADDLVRNNGYAANAVQLHQDHIVG 80 (530) T ss_pred CccceeecCccccchHHHhhhhcccCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhhC Confidence 33211100000 00011111111111110 01112234677788899988887766 Q ss_pred ceeEEEe-cC-------Cc--ccccchHHHHhh---hhcc------ccCCHHHHHHHHHHHHHhcCCceEEEEecCCCce Q lcl|Aclame:pro 55 FPLVKKD-VN-------GD--IIHDEDINYLLN---VKST------SNASARTWKFAMAVNAILTGNSFSRILRDPKTNQ 115 (406) Q Consensus 55 ~~~~~~~-~~-------~~--~~~~~~~~~lL~---~~Pn------~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~ 115 (406) ..+.+.- .+ ++ ......+..++. ..|+ -.++.+++...++..++..|++|+.+++....|. T Consensus 81 ~Gi~~~~~p~~~~l~~~~~~~~~~~~~ie~~w~~W~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~~~~~~~~g~ 160 (530) T protein:vir:38 81 SFFRLSYRPSWRYLGINEEDSRAFSRDVEAAWNEYAEDDFCGIDAERKRTFTMMIREGVAMHAFNGELCVQATWDSDSTR 160 (530) T ss_pred CCceeeeccchhhcCCCHhHHHHHHHHHHHHHHHhhcCCCcEEeeeccCCHHHHHHHHHHHHhhCCceEEEeeeccCCCC Confidence 5665542 11 11 111122222222 3343 3468889999999999999999999987665554 Q ss_pred --eEEEeecCCeeEEE--------------EEccCcceE-EEEEeec-CC----------eEEEEcceeeEeeccCC-CC Q lcl|Aclame:pro 116 --ALQFQFYRPSETTV--------------EETDNHEIV-YTFTDML-TA----------KQVKCFAHDVIHWKFFS-HD 166 (406) Q Consensus 116 --~~~l~~l~p~~~~~--------------~~~~~g~~~-~~~~~~~-~g----------~~~~~~~~~vih~r~~~-~~ 166 (406) +..+..|.|+.+.. ..+..|.++ |++.... .+ ....++..+|+|+...- .. T Consensus 161 ~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~vlH~f~~~r~g 240 (530) T protein:vir:38 161 LFRTQFKMVSPKRVSNPNNIGDTRNCRAGVKINDSGAALGYYVSDDGYPGWMAQNWTYIPRELPGGRPSFIHVFEPMEDG 240 (530) T ss_pred ccceEEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEEeeccCCCccccccceeeeeeccChhHeEeeccccCCC Confidence 46677787766542 334445444 3332221 11 12335667999998654 45 Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCC-----------CHHHHHHHHHHHHHH---hcc--- Q lcl|Aclame:pro 167 TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQL-----------SGDARQRARQEFEKM---REG--- 229 (406) Q Consensus 167 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~-----------~~e~~~~~~~~~~~~---~~g--- 229 (406) ...|+|.+..+...+.......+......+-.+.-.++++..... .+++...+....... +.. T Consensus 241 Q~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (530) T protein:vir:38 241 QTRGANAFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGADNKEQQSKLTGWLGEMAAYYSAAPV 320 (530) T ss_pred cccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeeccCCccccccccccCCcccccccccccchhhhhcccccce Confidence 689999999988888877766666655555555555555432211 111111111111111 110 Q ss_pred -cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHh-cc--cccchhHH-----------HHHHHH Q lcl|Aclame:pro 230 -SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKL-GV--NSPNQSVA-----------QLMEDY 294 (406) Q Consensus 230 -~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g~--~~~~~n~~-----------~~~~~~ 294 (406) -..|.+..|..|.+++..+.+-...+|.+..+...+.||+.+|||.+.| |. ..+||++. ..+..+ T Consensus 321 ~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~f~~~~lr~iaaglGi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~~ 400 (530) T protein:vir:38 321 RLGGARVPHLLPGDSLNLQSAQDTDNGYSTFEQSLLRYIAAGLGVSYEQLSRNYSQMSYSTARASANESWAYFMGRRKFV 400 (530) T ss_pred eccCceeeecCCCCeeeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHH Confidence 1234577889999999988876667888999999999999999999988 43 23565432 233334 Q ss_pred HHHHHHHHHH-HHHHHHHhhccCccchhh----------hhhhhc----ccchhHHHHHHHHHHHhCCCcCHHHHHHHhC Q lcl|Aclame:pro 295 VTNDLPFYFD-AITSELGLKTLNDKDRRL----------YHIEFD----TRSVTGRNVDEIVKLVNNQILTPNQGLVELG 359 (406) Q Consensus 295 ~~~~i~P~~~-~ie~~l~~~l~~~~~~~~----------~~~~~~----~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g 359 (406) ....+.|+.. .+++++.+..++...... ..+.+- ...|..+.+++....+++|+.|.-++-...| T Consensus 401 ~~~~~~pi~~~wl~~av~~G~i~~p~~~~~~~~~~~~a~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~s~~~~~a~~G 480 (530) T protein:vir:38 401 ASRQACQMFLCWLEEAIVRRVVTLPSKARFSFQEARTAWGNANWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECAKRG 480 (530) T ss_pred HHHHhhHHHHHHHHHHHHcCCccCCCCCCCCchhhHHhhhceeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcC Confidence 4444455443 466666554444221110 111121 1236778888899999999999999888889 Q ss_pred CCCCCCCCCCee------eeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 360 KQKSTDPNMDRY------QSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 360 ~~p~~~~~gd~~------~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) .++- +.-+.+ +.-.++.+-.. ....+..+...+.++..++++. T Consensus 481 ~D~~--~v~~q~a~e~~~~~~~Gl~~~~~--~~~~~~~~~~~~~~~~~d~~~~ 529 (530) T protein:vir:38 481 DDYQ--EIFAQQVRESMERRAAGLNPPAW--AAAAFEAGVKKSNEEEQDGARA 529 (530) T ss_pred CCHH--HHHHHHHHHHHHHHHcCCCCCCC--cccccCCCCCCCCCCCCCCCCC Confidence 8874 111110 00111111000 0011111111111111112222 No 129 >protein:vir:77981 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1843 # MgeName: P23-45 # Cross-refs: genbank:acc:YP_001467939;genbank:gi:157265380;genbank:GeneID:5600471 Probab=99.51 E-value=2.6e-13 Score=89.61 Aligned_cols=384 Identities=10% Similarity=0.016 Sum_probs=210.3 Q ss_pred CcccccccCCCCcch---------------hhHHHh-hcCC-----------cccccchhhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYD---------------DYISSV-LAGD-----------VSQKYLGVSALKNSDILTATSIIAGDIA 53 (406) Q Consensus 1 M~~f~~~~~~~~~~~---------------~~~~~~-~~~~-----------~~~~~~~~~a~~~~~v~~~i~~ia~~ia 53 (406) |..=+++-+...+.. ..+.+. ..|. ....-.-+..+..+.|.+|++.+...|. T Consensus 1 m~kk~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~ly~~m~~D~hi~s~l~~Rk~av~ 80 (448) T protein:vir:77 1 MAKRGRKPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVYHKMLSDGTVKNALNYIFGRIR 80 (448) T ss_pred CCCCCCCCcccCCcccccchhhhhhhccchhhhcccccccccccchhHhhccccchHHHHHHhhChHHHHHHHHHHHHHh Confidence 554333221111100 000000 0000 0000011224567889999999999999 Q ss_pred cceeEEEecCCcccccchHHHHhh---hhcc---ccCCHHHHHHHHHHHHHhcCCceEEEEecC-CCce--eEEEeecCC Q lcl|Aclame:pro 54 RFPLVKKDVNGDIIHDEDINYLLN---VKST---SNASARTWKFAMAVNAILTGNSFSRILRDP-KTNQ--ALQFQFYRP 124 (406) Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~lL~---~~Pn---~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~-~~g~--~~~l~~l~p 124 (406) +++|.|...+.+ ......+..+. ..+. ...++.+++..+ .+.+.+|-++.++++.. .+|+ +..+.+.++ T Consensus 81 ~~~w~v~p~~~~-~~d~~~ae~v~~~l~~~~~~~~~~~f~~~i~~~-lda~~~G~s~~Eivw~~~~dg~~~~~~l~~r~~ 158 (448) T protein:vir:77 81 SAKWYVEPASTD-PEDIAIAAFIHAQLGIDDASVGKYPFGRLFAIY-ENAYIYGMAAGEIVLTLGADGKLILDKIVPIHP 158 (448) T ss_pred cCCceEecCCCC-HHHHHHHHHHHHHhhchhhhhccCCHHHHHHHH-HHhhhhcceeEEEEEeecCCCceeeccccccCC Confidence 999998643322 22222222221 1221 234566777777 46778999999998853 3454 345556666 Q ss_pred eeE-EEEEccCcceEEEEEeec------CCeEEEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 125 SET-TVEETDNHEIVYTFTDML------TAKQVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKD 197 (406) Q Consensus 125 ~~~-~~~~~~~g~~~~~~~~~~------~g~~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n 197 (406) ..+ .+..+.++++.+...... ......+|...++|..+.....++|.+.+..|.-..-......+.-..|.+. T Consensus 159 ~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~ 238 (448) T protein:vir:77 159 FNIDEVLYDEEGGPKALKLSGEVKGGSQFVNGLEIPIWKTVVFLHNDDGSFTGQSALRAAVPHWLAKRALILLINHGLER 238 (448) T ss_pred CccceeeeecCCceEEEecCCcccccccCCCccccccceEEEEecCCcCCcccchHHHHHHHHHHHHHhhHHHHHHHHHH Confidence 433 223344454443322111 1123456788888886544345799999999999999999999999999999 Q ss_pred CCCcceEEeecCCC--CHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCH Q lcl|Aclame:pro 198 GFSSGILTMKGAQL--SGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPS 275 (406) Q Consensus 198 g~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp 275 (406) -|.|-.+.+.+... ++++++.+.+...+...|.++ .++++.|++++-+........+.+..++..++|+.+..-.- T Consensus 239 yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~~a--~~iiP~g~~ie~~ea~~~~~~~~~~i~~~d~~Isk~iLGqt 316 (448) T protein:vir:77 239 FMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKPRH--GIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIARALGIDF 316 (448) T ss_pred cCCceeEEecCCCCCCCHHHHHHHHHHHHHHhcCCce--EEEecCCceEEEEecCCCccCHHHHHHHHHHHHHHHHhccc Confidence 88887777776544 346677777777766555554 36788888877776554445566778888888987653321 Q ss_pred HHhccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc-------chhhhhhhhc--ccchhHHHHHHHHHHHh Q lcl|Aclame:pro 276 YKLGVN-SPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDK-------DRRLYHIEFD--TRSVTGRNVDEIVKLVN 345 (406) Q Consensus 276 ~~lg~~-~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~-------~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 345 (406) --.+.. +.+++............+.-.+++|++.||+.|+.+. ....-.+.|+ ...|+++.++.+..++ T Consensus 317 lTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~Li~~l~~lNfg~~~~~P~~~f~~~e~eDl~~~a~~~~~l~- 395 (448) T protein:vir:77 317 NTVQLNMGVQAVNIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPGATRFPRLTFEMEERNDFSAAANLMGMLI- 395 (448) T ss_pred cccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEecCCChhhHHHHHHHhHHHH- Confidence 111111 1122222233345677778899999999998886532 1111123333 3446666666666665 Q ss_pred CCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 346 NQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 346 ~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) +-+|+.+|+|.-. +.+ ..+....| +...+.....-+.......| T Consensus 396 ------~~~~~~~~ip~~~-~~~---~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 439 (448) T protein:vir:77 396 ------NAVKDSEDIPTEL-KAL---IDALPSKM-------RRALGVVDEVREAVRQPADS 439 (448) T ss_pred ------HHHHHHhcCCccC-CcC---CCCCchhc-------ccccCCCCCCCchhhcchhh Confidence 4589999997521 111 10000000 00000000000001111111 No 130 >protein:vir:3648 Length: 695 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705643;genbank:gi:23752328;genbank:GeneID:955749 Probab=99.51 E-value=5.1e-14 Score=93.44 Aligned_cols=388 Identities=13% Similarity=0.055 Sum_probs=196.0 Q ss_pred Ccc---cccccC----------------CCCcchhhHHHhhcCCccc-ccchhhhhccHHHHHHHHHHHHhhccceeEEE Q lcl|Aclame:pro 1 MSF---FQPLGT----------------SKVSYDDYISSVLAGDVSQ-KYLGVSALKNSDILTATSIIAGDIARFPLVKK 60 (406) Q Consensus 1 M~~---f~~~~~----------------~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 60 (406) .++ |.-.-+ +..+.+. + .|..+..-. +..-....+.|.+++|+..|++.+.+- |... T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l-~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~-w~~~ 143 (695) T protein:vir:36 67 LRLARQFEVDVSNYTPRERRAASYALDFNGTSMDA-L-SFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRT-WGEA 143 (695) T ss_pred cccceeceecccccCccccchhhhhhccccccccc-c-hhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcc-ccee Confidence 111 110000 0001111 1 111111111 111122357888899999999888765 5322 Q ss_pred e-cCCc------------ccc--cchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC------------- Q lcl|Aclame:pro 61 D-VNGD------------IIH--DEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK------------- 112 (406) Q Consensus 61 ~-~~~~------------~~~--~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~------------- 112 (406) . ...+ ... ...-...|...-..+.-+.-| ...+..--++|-+.+++..+.. T Consensus 144 ~~~~~e~~~~~g~~~~~~~~~~~d~dqik~L~~e~erL~V~~~l-~eaik~aRlfGGa~~~i~i~gdd~~l~~PL~~~~~ 222 (695) T protein:vir:36 144 IGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAV-RTTVIHDQAFGRAHPYFKIKGDDQIMDTPLVPRPY 222 (695) T ss_pred cccchhhhhhccccccccccccCchHHHHHHHHHHHHHHHHHHH-HHHHHhhccccceEEEEEeccCccccccccccccc Confidence 1 1111 000 111222333222222222333 3344444467878776654322 Q ss_pred ---CceeEEEeecCCeeEEEEEcc--------CcceEEEEEeecCCeEEEEcceeeEeeccCC-------CCCccccCHH Q lcl|Aclame:pro 113 ---TNQALQFQFYRPSETTVEETD--------NHEIVYTFTDMLTAKQVKCFAHDVIHWKFFS-------HDTILGRSPL 174 (406) Q Consensus 113 ---~g~~~~l~~l~p~~~~~~~~~--------~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~-------~~~~~G~s~~ 174 (406) .|....+..++|+++.+...+ .+.+.|++.. | .++-.+.++.|...+ ...+.|+|.. T Consensus 223 ~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~---G--~kIH~SRL~~f~g~plPd~LKp~y~~~GiSv~ 297 (695) T protein:vir:36 223 TVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI---G--TEVHATRLHTIVSRPVGDMLKPTYSFAGISMT 297 (695) T ss_pred cccCcceeeeEeecccccccchhhhccchhhccCCCceEEEe---c--eEEeeeeEEEecCCCchhhhhcccccCcccHH Confidence 245566888899888875432 2334344331 2 246666666665433 1235699999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHH--HHHHHhcccccCceeecc-CCceeeeccCCh Q lcl|Aclame:pro 175 LSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQ--EFEKMREGSVGGSPLVFD-STMEYTPLEIDT 251 (406) Q Consensus 175 ~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~--~~~~~~~g~~~~~~~vl~-~g~~~~~l~~~~ 251 (406) +.+...+..+.........+.+.-............+.+.....+.. .+-+++.+ | .++.+++ ..-+|++.+.+. T Consensus 298 q~~~e~V~~~~rT~~~v~~Li~~~~v~~lk~dla~aL~~g~~~~l~~R~eli~~~Rs-n-~G~~llDk~~Eefeq~stsl 375 (695) T protein:vir:36 298 QLAMPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALMPGANVDLSMRAELINRYRD-N-RNILFLDKATEEFFQFNTPL 375 (695) T ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHhhcChhHHHHHHHHHHHHHhcC-c-cceEEEecCCcceEEEeccc Confidence 99999999888888777777654332222111112222222222333 33344442 3 4577888 478999988666 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCHHHh-cccc-----cc----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchh Q lcl|Aclame:pro 252 NVLQLITSNNFSTAQIAKALRVPSYKL-GVNS-----PN----QSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRR 321 (406) Q Consensus 252 ~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g~~~-----~~----~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~ 321 (406) ..++ +........||.+-+||-..| |.+. |+ .|+-+.-+...+.-|+|.++.+-+.+-+..|+..+. T Consensus 376 SGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~idp- 452 (695) T protein:vir:36 376 SGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAVDP- 452 (695) T ss_pred CCHH--HHHHHHHHHHHhhhcCchhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC- Confidence 5543 344455567999999998876 3222 21 344555566667789999999988887777765543 Q ss_pred hhhhhhcc--cchhH-------HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcc---ccccc Q lcl|Aclame:pro 322 LYHIEFDT--RSVTG-------RNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE---EYQDK 389 (406) Q Consensus 322 ~~~~~~~~--~~~~~-------~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~---~~~~~ 389 (406) .+.++|+. ..+.+ ++++....+++.|+++++|+|..+.-+|-. +.+..+ ..+-.|.-..+ ..... T Consensus 453 di~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s-~Y~~~~--D~~d~p~~~~~~~~~~~~~ 529 (695) T protein:vir:36 453 SIKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDG-PYAGKL--DANDDPGVPADDDIDGVLT 529 (695) T ss_pred cceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCc-cccccc--ccccCCCcCccchhhhhHh Confidence 35556642 22222 345556678899999999999999887642 222111 12222111000 00000 Q ss_pred cC-cccCCCccCCCCCCC Q lcl|Aclame:pro 390 VG-IKGKGGEVNAEEDKS 406 (406) Q Consensus 390 ~~-~~~~gg~~~~~~~~~ 406 (406) .. ...+|++. ++..+. T Consensus 530 ~~~~~~~~~~~-~~~~~~ 546 (695) T protein:vir:36 530 YVQRLAEGGDT-GAPGGA 546 (695) T ss_pred hhcCccccccc-CCCCcc Confidence 11 11111111 111111 No 131 >protein:vir:79511 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1870 # MgeName: P74-26 # Cross-refs: genbank:acc:YP_001468055;genbank:gi:157265497;genbank:GeneID:5600628 Probab=99.51 E-value=2e-13 Score=90.15 Aligned_cols=384 Identities=10% Similarity=0.005 Sum_probs=211.8 Q ss_pred CcccccccCCCCcch---------------hhHHHh-hcCCccc---cc--------chhhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYD---------------DYISSV-LAGDVSQ---KY--------LGVSALKNSDILTATSIIAGDIA 53 (406) Q Consensus 1 M~~f~~~~~~~~~~~---------------~~~~~~-~~~~~~~---~~--------~~~~a~~~~~v~~~i~~ia~~ia 53 (406) |..=.++.....+.. ..+.+. ..|.... .+ .-+..+..+.|.+|++.+...|. T Consensus 1 m~k~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~ly~~m~~D~hi~s~l~~Rk~av~ 80 (448) T protein:vir:79 1 MAKRGRKPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVYHKMLSDGTVKNALNYIFGRIR 80 (448) T ss_pred CCCCCCCCccccCcccccccccchhhhhhhhhhcccccccccccchhHhhccccchHHHHHHhhChHHHHHHHHHHHHHh Confidence 554333322111110 000000 0010000 00 11224567789999999999999 Q ss_pred cceeEEEecCCcccccchHHHHhh---hhcccc---CCHHHHHHHHHHHHHhcCCceEEEEecC-CCce--eEEEeecCC Q lcl|Aclame:pro 54 RFPLVKKDVNGDIIHDEDINYLLN---VKSTSN---ASARTWKFAMAVNAILTGNSFSRILRDP-KTNQ--ALQFQFYRP 124 (406) Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~lL~---~~Pn~~---~~~~~f~~~~~~~~~l~G~~~~~i~~~~-~~g~--~~~l~~l~p 124 (406) +++|.|...+ ........+..+. ..+... .++.+++..++ +.+.+|-++.++++.. .+|+ +..+.+.++ T Consensus 81 ~~~w~v~p~~-~~~~~~~~ae~v~~~l~~~~~~~~~~~f~~~~~~~l-da~~~G~s~~Eivw~~~~~g~~~~~~l~~r~~ 158 (448) T protein:vir:79 81 SAKWYVEPAS-TDPEDIAIAAFIHAQLGIDDASVGKYPFGRLFAIYE-NAYIYGMAAGEIVLTLGADGKLILDKIVPIHP 158 (448) T ss_pred cCCceEecCC-CCHHHHHHHHHHHHHhhhhhhhhccCCHHHHHHHHH-HhhhhcceeEEEEeeecCCCceecccccccCC Confidence 9999996432 2222222222221 233322 34445555544 4558999999998853 3454 345556666 Q ss_pred eeE-EEEEccCcceEEEEEeec-C-----CeEEEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 125 SET-TVEETDNHEIVYTFTDML-T-----AKQVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKD 197 (406) Q Consensus 125 ~~~-~~~~~~~g~~~~~~~~~~-~-----g~~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n 197 (406) ..+ .+..+.++.+.+...... . .....+|..-++|..+.....++|.+.+..|.-..-......+.-..|.+. T Consensus 159 ~~~~~f~~~~d~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~ 238 (448) T protein:vir:79 159 FNIDEVLYDEEGGPKALKLSGEVKGGSQFVSGLEIPIWKTVVFLHNDDGSFTGQSALRAAVPHWLAKRALILLINHGLER 238 (448) T ss_pred ccccceeeecCCceEEeecCCcccccccCCCccccccceEEEEecCccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHH Confidence 533 223334444443322111 1 123456778888876543334799999999999999999999999999999 Q ss_pred CCCcceEEeecCCCC--HHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCH Q lcl|Aclame:pro 198 GFSSGILTMKGAQLS--GDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPS 275 (406) Q Consensus 198 g~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp 275 (406) -|.|-.+.+.+...+ +++++.+.+...+...|.++ .++++.|++++-+.......++.+..++..++|+.+.-=.- T Consensus 239 yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~~a--~~iiP~~~~ie~~ea~~~~~~~~~~i~~~d~~Isk~iLGqt 316 (448) T protein:vir:79 239 FMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKPRH--GIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIARALGIDF 316 (448) T ss_pred cCCceEEEecCCCCCcCHHHHHHHHHHHHHHhcCCce--EEEecCCceEEEEecCCCcccHHHHHHHHHHHHHHHHhhhh Confidence 888877777765544 56677777777666656554 36788998888776555445567788888888886543211 Q ss_pred HHhccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc------ch-hhhhhhhc--ccchhHHHHHHHHHHHh Q lcl|Aclame:pro 276 YKLGVN-SPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDK------DR-RLYHIEFD--TRSVTGRNVDEIVKLVN 345 (406) Q Consensus 276 ~~lg~~-~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~------~~-~~~~~~~~--~~~~~~~~~~~~~~~~~ 345 (406) --.+.. +.+++............+.-.+++|++.+|+.|+.+. .. ..-.+.|+ ...|+++.++.+..++. T Consensus 317 lTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~li~~l~~lNfg~~~~~P~~~f~~~e~~Dl~~~a~~~~~l~~ 396 (448) T protein:vir:79 317 NTVQLNMGVQAINIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPSATRFPRLTFEMEERNDFSAAANLMGMLIN 396 (448) T ss_pred hccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcEEEecCCChHHHHHHHHHhhhhhc Confidence 001111 1112222222345567778899999999998776532 11 11123333 34466777888888887 Q ss_pred CCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 346 NQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 346 ~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) .+-..-+-+|+.+|+|.- .+. +....+ ...+.. ++......+| T Consensus 397 ~~~~~~~~~~~~~~~p~~-~~~-~~~~a~---------------~~~~~~-~~~~~~~~~~ 439 (448) T protein:vir:79 397 AVKDSEDIPTELKALIDA-LPS-KMRRAL---------------GVVDEV-REAVRQPADS 439 (448) T ss_pred cchhhHHHHHHhhcCCCC-CCC-cccccc---------------CCCCcc-cccccCCccc Confidence 765555557888888732 121 111100 000111 1111122222 No 132 >protein:vir:101541 Length: 694 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958122;genbank:gi:41057668;genbank:GeneID:2716798 Probab=99.51 E-value=6.6e-14 Score=92.83 Aligned_cols=382 Identities=13% Similarity=0.062 Sum_probs=197.3 Q ss_pred CcccccccCCCCcchhhHHHhhcCCccc-ccchhhhhccHHHHHHHHHHHHhhccceeEEEe-cCCc------------c Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQ-KYLGVSALKNSDILTATSIIAGDIARFPLVKKD-VNGD------------I 66 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~-~~~~------------~ 66 (406) |.| ...+.+. + .|..+..-. +..-....+.|.+++|+..|++.+.+- |.... ...+ . T Consensus 91 ~~~------~~~~~~~-l-~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~-w~~~~~~~~e~~~~~g~~~~~~~ 161 (694) T protein:vir:10 91 LDF------NGTSMDA-L-SFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRT-WGEAIGGTKEKADTSGLAAGGNA 161 (694) T ss_pred hcc------Ccccccc-h-hhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcc-cceeccccchhhhhhcccccccc Confidence 222 0011111 1 111111111 111123357888999999999888765 53221 1111 1 Q ss_pred cc--cchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC----------------CceeEEEeecCCeeEE Q lcl|Aclame:pro 67 IH--DEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK----------------TNQALQFQFYRPSETT 128 (406) Q Consensus 67 ~~--~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~----------------~g~~~~l~~l~p~~~~ 128 (406) .. +..-...|...-..+.-+.-|.+.+.+. -++|-+.+++..+.. .|....+..++|+++. T Consensus 162 ~~~~d~dqi~~L~~e~erl~V~~~l~eaik~a-RlfGGa~~~i~I~gdd~~l~~PL~~~~~~I~kGslKGl~ViDp~~vt 240 (694) T protein:vir:10 162 ASTSDGDQLKQINDEIERLRIRDAVRTTVIHD-QAFGRAHPYFKIKGDDQIMDTPLVPRPYTVPKGSFQGLRVVEPYWVT 240 (694) T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccceEEEEEeecCccccccccccccccccCcceeeeEeecccccc Confidence 11 1112223433333333333444444444 467877776654321 2455668888998888 Q ss_pred EEEcc--------CcceEEEEEeecCCeEEEEcceeeEeeccCC-------CCCccccCHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 129 VEETD--------NHEIVYTFTDMLTAKQVKCFAHDVIHWKFFS-------HDTILGRSPLLSLGDEIDLQTGGINTLIK 193 (406) Q Consensus 129 ~~~~~--------~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~-------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~ 193 (406) +...+ .+.+.|++.. | .++-.+.++.|...+ ...+.|+|..+.+...+..+......... T Consensus 241 P~~~n~~dP~spdfgkP~~y~V~---G--~~IH~SRL~~f~g~plPd~LKp~y~~~G~Sv~q~~~e~V~~~~rT~~~v~~ 315 (694) T protein:vir:10 241 PNNYNSINPVADDFYKPSTWWMI---G--TEVHATRLHTIVSRPVGDMLKPTYSFAGISMTQLAMPYIDNWLRTRQSVSD 315 (694) T ss_pred cchhhhccchhhccCCCceEEEe---c--eEEeeeeEEEecCCCchhhhhcccccCcccHHHHHHHHHHHHHHHHhHHHH Confidence 75432 2334344331 2 246666666665433 12356999999999999988888877777 Q ss_pred HHhcCCCcceEEeecCCCCHHHHHHHHH--HHHHHhcccccCceeecc-CCceeeeccCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 194 FFKDGFSSGILTMKGAQLSGDARQRARQ--EFEKMREGSVGGSPLVFD-STMEYTPLEIDTNVLQLITSNNFSTAQIAKA 270 (406) Q Consensus 194 ~~~ng~~~~~~~~~~~~~~~e~~~~~~~--~~~~~~~g~~~~~~~vl~-~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~ 270 (406) +...-............+.+.....+.. .+-+++.+ | .++.+++ ..-+|++.+.+...++ +........||.+ T Consensus 316 Li~~~~v~~lk~dla~~L~~g~~~~l~~R~eli~~~Rs-n-~G~~llDk~~Eefeq~stslSGLd--dVi~qf~q~VAga 391 (694) T protein:vir:10 316 IVKQFSVSGILMDLAQALMPGANVDLSMRAELINRYRD-N-RNILFLDKATEEFFQFNTPLSGLD--ALQAQAQEQMSAV 391 (694) T ss_pred HHHhhhhHHHHHHHHHhhcChhHHHHHHHHHHHHHhcC-c-cceEEEecCCcceEEEecccCCHH--HHHHHHHHHHHhh Confidence 7655333322111112222222223333 33344442 3 4577888 4789999886665543 3444555679999 Q ss_pred hcCCHHHh-cccc-----cc----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcc--cchh----- Q lcl|Aclame:pro 271 LRVPSYKL-GVNS-----PN----QSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT--RSVT----- 333 (406) Q Consensus 271 fgvpp~~l-g~~~-----~~----~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~--~~~~----- 333 (406) -+||-..| |.+. |+ .|+-+.-....+.-|+|.++.+-+.+-+..|+..+. .+.++|+. ..+. T Consensus 392 a~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~idp-~i~~~fnPL~qmtd~EkAe 470 (694) T protein:vir:10 392 SHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAVDP-SIKWQWNALRELDDLEVAE 470 (694) T ss_pred hcCchhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-cceEEeCCCCCcCHHHHHH Confidence 99998876 3222 21 344555566667789999999988887777765543 35556642 1222 Q ss_pred --HHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcc---ccccccC-cccCCCccCCCCCCC Q lcl|Aclame:pro 334 --GRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE---EYQDKVG-IKGKGGEVNAEEDKS 406 (406) Q Consensus 334 --~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~---~~~~~~~-~~~~gg~~~~~~~~~ 406 (406) +++++....+++.|+++++|+|..+.-+|-. +.+..+ ..+-.|.-..+ ....... ...+|++. ++..+. T Consensus 471 I~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s-~Y~~~~--D~~d~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 545 (694) T protein:vir:10 471 SRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDG-PYAGKL--DANDDPGVPADDDIDGVLTYVQRLAEGGDT-GAPGGA 545 (694) T ss_pred HHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCc-cccccc--ccccCCCcCccchhhhhHhhhcCccccccc-CCCCcc Confidence 2345556678899999999999999887642 222111 12222111000 0000011 11111111 111111 No 133 >protein:vir:106716 Length: 698 # NCBI annotation: gp18 # Family: family:all:297 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944326;genbank:gi:38638625;genbank:GeneID:2657345 Probab=99.51 E-value=3.7e-14 Score=94.23 Aligned_cols=389 Identities=14% Similarity=0.076 Sum_probs=201.6 Q ss_pred Ccc---cccccC----------------CCCcchhhHHHhhcCCccc-ccchhhhhccHHHHHHHHHHHHhhccceeEEE Q lcl|Aclame:pro 1 MSF---FQPLGT----------------SKVSYDDYISSVLAGDVSQ-KYLGVSALKNSDILTATSIIAGDIARFPLVKK 60 (406) Q Consensus 1 M~~---f~~~~~----------------~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 60 (406) .++ |.-.-+ +....+. + .|..+..-. +..-....+.|.+++|+..|++.+.+- |... T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l-~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~-w~~~ 143 (698) T protein:vir:10 67 LRLARQFEVDVSNYTPRERRAASYALDFNGTSMDA-L-SFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRT-WGEA 143 (698) T ss_pred ccccccceeccccCCccccchhhhhhccccccccc-c-hhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcc-ccee Confidence 111 110000 0001111 1 111111111 111122357888899999999888765 5322 Q ss_pred e-cCCc------------ccc--cchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC------------- Q lcl|Aclame:pro 61 D-VNGD------------IIH--DEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK------------- 112 (406) Q Consensus 61 ~-~~~~------------~~~--~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~------------- 112 (406) . ...+ ... +..-...|...-..+.-+..+.+.+.+.. ++|-+.+++..+.. T Consensus 144 ~~~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erl~V~~~l~eai~~aR-lfGGa~~~i~I~gdd~~l~~PL~~~~~ 222 (698) T protein:vir:10 144 IGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQ-AFGRAHPYFKIKGDDQIMDTPLVPRPY 222 (698) T ss_pred ccccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccceEEEEEeecCccccccccccccc Confidence 1 1111 111 11122234333333333334444444444 67777766654321 Q ss_pred ---CceeEEEeecCCeeEEEEEcc--------CcceEEEEEeecCCeEEEEcceeeEeeccCC-------CCCccccCHH Q lcl|Aclame:pro 113 ---TNQALQFQFYRPSETTVEETD--------NHEIVYTFTDMLTAKQVKCFAHDVIHWKFFS-------HDTILGRSPL 174 (406) Q Consensus 113 ---~g~~~~l~~l~p~~~~~~~~~--------~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~-------~~~~~G~s~~ 174 (406) .|....+..++|+++.+...+ .+.+.+++.. |. ++..+.++.|...+ ...+.|+|.. T Consensus 223 ~I~kGslKGL~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~---G~--~IH~SRL~~~vg~pvpd~LKp~y~f~G~Sv~ 297 (698) T protein:vir:10 223 TVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI---GS--EVHATRLHTIVSRPVGDMLKPTYSFAGISMT 297 (698) T ss_pred cccCccceeeeeecccccccchhhhccchhhccCCCceEEEe---cc--eecceeEEEecCCCchhhhcchhccCCccHH Confidence 245566888888888875432 2333333332 22 45666666665432 2235699999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHH--HHHHHhcccccCceeecc-CCceeeeccCCh Q lcl|Aclame:pro 175 LSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQ--EFEKMREGSVGGSPLVFD-STMEYTPLEIDT 251 (406) Q Consensus 175 ~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~--~~~~~~~g~~~~~~~vl~-~g~~~~~l~~~~ 251 (406) +.+...+..+.........+...-............+++....++.. .+-+++.+ | .++.+++ ..-+|++.+.+. T Consensus 298 q~~~e~V~~~~rT~~~v~~Li~~~~~~~l~~dla~aL~~g~~~~l~~R~eli~~~Rs-n-~G~~llDk~~Eefeq~st~l 375 (698) T protein:vir:10 298 QLAMPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALTPGANVDLSMRAELINRYRD-N-RNILFLDKATEEFFQFNTPL 375 (698) T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHhcCChhhHHHHHHHHHHHHhcC-c-cceEEEecCCcceEEEecCc Confidence 99999999888888777777655333322111222223223333333 33344442 3 4577788 578999988766 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCHHHh-cccc-----cc----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchh Q lcl|Aclame:pro 252 NVLQLITSNNFSTAQIAKALRVPSYKL-GVNS-----PN----QSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRR 321 (406) Q Consensus 252 ~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g~~~-----~~----~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~ 321 (406) ..++ +........||.+-+||-..| |.+. |+ .|+-+..+...+.-|+|.++.+-+.+-+-.|+..+. T Consensus 376 SGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~idp- 452 (698) T protein:vir:10 376 SGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAVDP- 452 (698) T ss_pred CCHH--HHHHHHHHHHHhhhcCchhhhhccCCcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC- Confidence 5543 444455567999999998876 3222 21 344555556667789999999988887777765543 Q ss_pred hhhhhhcc--cchhH-------HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccc---hhhcccc-cc Q lcl|Aclame:pro 322 LYHIEFDT--RSVTG-------RNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVF---LDKKEEY-QD 388 (406) Q Consensus 322 ~~~~~~~~--~~~~~-------~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~---~~~~~~~-~~ 388 (406) .+.++|+. ..+.+ ++++....++..|+++++|+|..|.-+|-. +....+ ..+-.| -+...+. .. T Consensus 453 ~i~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s-~Y~~~~--d~~d~p~~~~~~~~~~~~~ 529 (698) T protein:vir:10 453 SIKWQWNALRELDDLEVAEARYKQAQSDVLYVQEQVIRPDQVAARLNTEPDG-PYAGKL--DANDDPGAPADDDIDGVLT 529 (698) T ss_pred cceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhccCCC-cccccc--CCcccCCCCCCCcchHHHh Confidence 34556642 22222 334555678899999999999999776532 221111 111111 1111110 01 Q ss_pred ccCcccCCCccCCCCCCC Q lcl|Aclame:pro 389 KVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 389 ~~~~~~~gg~~~~~~~~~ 406 (406) ......+||+..+..+++ T Consensus 530 ~~~~~~~~~~~~~~~~~~ 547 (698) T protein:vir:10 530 YVQRMAEGGDTGAPTAPG 547 (698) T ss_pred hhcCCcCCCCcccccccc Confidence 112334455544444444 No 134 >protein:vir:10321 Length: 495 # NCBI annotation: ORF23 # Family: family:all:47 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758916;genbank:gi:27311190;genbank:GeneID:956137 Probab=99.50 E-value=6.5e-14 Score=92.87 Aligned_cols=398 Identities=13% Similarity=-0.005 Sum_probs=199.6 Q ss_pred CcccccccCCCCc----------chh-----hHHHhhcCCccccc----------chhhhhccHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 1 MSFFQPLGTSKVS----------YDD-----YISSVLAGDVSQKY----------LGVSALKNSDILTATSIIAGDIARF 55 (406) Q Consensus 1 M~~f~~~~~~~~~----------~~~-----~~~~~~~~~~~~~~----------~~~~a~~~~~v~~~i~~ia~~ia~~ 55 (406) |||++.--..+.+ ++. .+..+...+....+ ...-+..++.+.+||+.+...+-.. T Consensus 1 m~~~~~~~~a~~~~~~~~~~~~~y~aa~~~~~~~~~~~~s~d~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~~vVG~ 80 (495) T protein:vir:10 1 MNMTPSGYQSLASGLLVPVGASAYEGASGGHRWQDIGDYGPDTAVASGIQTLRARSHHNVRNNPWATNAVATWVAAAVGN 80 (495) T ss_pred CCcccccccccchhhhhHHHhhhhhccccCcccCCCCCCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhhcCC Confidence 9998752211110 000 00000000000000 0011235677778888877777444 Q ss_pred eeEEEecCCcccccchHHHHh---hhhc--cccCCHHHHHHHHHHHHHhcCCceEEEEecCC-Cc--eeEEEeecCCeeE Q lcl|Aclame:pro 56 PLVKKDVNGDIIHDEDINYLL---NVKS--TSNASARTWKFAMAVNAILTGNSFSRILRDPK-TN--QALQFQFYRPSET 127 (406) Q Consensus 56 ~~~~~~~~~~~~~~~~~~~lL---~~~P--n~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~-~g--~~~~l~~l~p~~~ 127 (406) .+...-.-........+..++ -.++ .-.++.+.+...++..++..|++|+.+..... .| .+..+..|.|+.+ T Consensus 81 Gi~p~~~~~~~~~~~~ie~~w~~wa~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~~~~~~~g~~~~~~lqliepd~l 160 (495) T protein:vir:10 81 GLTPRWRMKEQELRQELQELWGDWVNEADFDEVQSFYGLQALVVRTVINSGEAFVIKKPRPLSEGLSVPLQLQIIEPDML 160 (495) T ss_pred CcccccCCchHHHHHHHHHHHHHhhcCcccccccCHHHHHHHHHHHHHhCCceEEEEeecccCCCCccceEEEEechhhc Confidence 443321111111111222222 1222 23467888999999999999999998765432 22 4677888877776 Q ss_pred EE-----------------EEccCcceE-EEEEeecCC---------eEEEEcceeeEeeccCCCCCccccCHHHHHHHH Q lcl|Aclame:pro 128 TV-----------------EETDNHEIV-YTFTDMLTA---------KQVKCFAHDVIHWKFFSHDTILGRSPLLSLGDE 180 (406) Q Consensus 128 ~~-----------------~~~~~g~~~-~~~~~~~~g---------~~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~ 180 (406) .. ..+..|..+ |++.....| ....+|+++|+|+.........|+|.+..+. . T Consensus 161 ~~~~~~~~~~~g~~i~~GIe~d~~Gr~vaY~i~~~hpgd~~~~~~~~~~~rvpA~~vlH~f~~r~gQ~RGis~la~i~-~ 239 (495) T protein:vir:10 161 ASDIPDETLPSGGYVKGGIRFSNGGKRKAYCFYRNHPAESSLIGDPVDTVWIKAEHVLHVTVLTVRSDAGAPWFQLLL-R 239 (495) T ss_pred CCCCCCCCCCCCCEEEeceEECCCCceEEEEEeecCCCcccccccccceeeechhheEeccccCCCcccCcchhHHHH-H Confidence 42 122334333 444333332 2456899999999643334578998654433 3 Q ss_pred HHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHH----HHHHHHHHhcccccCceeeccCCceeeeccCChhHHHH Q lcl|Aclame:pro 181 IDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQR----ARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQL 256 (406) Q Consensus 181 i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~ 256 (406) +.......+......+-.+...++++.... ++...+. ..+.-......-..|.+..|..|.+++..+.+..-..| T Consensus 240 l~~l~~y~dael~~a~i~A~~~~fi~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~pG~i~~L~pGe~i~~~~p~~p~~~~ 318 (495) T protein:vir:10 240 LNELDQYEDAELVRKKTAALFAAFIQEATA-DSTGGPTIGQPKRSKGGKRITGLNPGTLQYLQPGQEVKFSNPADVGTTY 318 (495) T ss_pred HHHhhHHHHHHHHHHHHhhhheeeeecCCC-ccccccccCccccccCcccceecCCceeeecCCCCeeeeeCCCCCCCCH Confidence 444433343333333334444445443221 1100000 00000001111233567789999999999887666778 Q ss_pred HHHHHHHHHHHHHHhcCCHHHh-cc--cccchhHHHHH------------HHHHHHHHHHHHH-HHHHHHHhhccCccc- Q lcl|Aclame:pro 257 ITSNNFSTAQIAKALRVPSYKL-GV--NSPNQSVAQLM------------EDYVTNDLPFYFD-AITSELGLKTLNDKD- 319 (406) Q Consensus 257 ~e~~~~~~~~Ia~~fgvpp~~l-g~--~~~~~n~~~~~------------~~~~~~~i~P~~~-~ie~~l~~~l~~~~~- 319 (406) .+..+...+.||+.+|||.+.| |. ..+||++.... ..+....++|+.+ .++.++-...++..+ T Consensus 319 ~~f~~~~lr~iaaglGi~Ye~ltgD~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~~pi~~~~l~~a~l~G~i~~p~~ 398 (495) T protein:vir:10 319 EPWLRYQLLSIAKGYGITYEMLTGDLRGVNYSSIRAGLLEFRRLCQQVQHHMIIHQFCRPVGRWFMDFAVASGAVVIPDY 398 (495) T ss_pred HHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCc Confidence 8899999999999999999988 33 23565542222 1233444555443 355555443332111 Q ss_pred --hh--hhhhhhcc----cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC--------CCCeeeeccCccchhhc Q lcl|Aclame:pro 320 --RR--LYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDP--------NMDRYQSSLNYVFLDKK 383 (406) Q Consensus 320 --~~--~~~~~~~~----~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~--------~gd~~~~~~n~~~~~~~ 383 (406) .. ...+++-. ..|..+.+++....+++|+.|.-|+-...|.+|-+-- ..+++=++.+..|.. T Consensus 399 ~~~~~~~~~~~w~~p~~~~vDP~Ke~~A~~~~i~~G~~s~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~p~~-- 476 (495) T protein:vir:10 399 LQRRRYYNRVSWRTPRWEEVDPLKKHLADLGDVRAGFAPISDKQAERGYDMEELFDMISDANQLIDEYDLRLDSDPRY-- 476 (495) T ss_pred hhhhHhhhccccccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCc-- Confidence 11 11222221 2377888889999999999999998888898864110 001111111111111 Q ss_pred cccccccCcccCCCccCCCCCC Q lcl|Aclame:pro 384 EEYQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 384 ~~~~~~~~~~~~gg~~~~~~~~ 405 (406) .+.+ +...+..++.++++| T Consensus 477 --~~~~-~~~~~~~~~~~~~~e 495 (495) T protein:vir:10 477 --VNGS-GAEQKSVMEAALNNE 495 (495) T ss_pred --CCCc-cCCCCCCCCCCCCCC Confidence 0111 111112222222222 No 135 >protein:vir:78589 Length: 695 # NCBI annotation: NUDIX hydrolase # Family: family:all:297 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294854;genbank:gi:149882917;genbank:GeneID:5291060 Probab=99.50 E-value=9e-14 Score=92.11 Aligned_cols=388 Identities=13% Similarity=0.057 Sum_probs=197.7 Q ss_pred Ccc---cccccC----------------CCCcchhhHHHhhcCCccc-ccchhhhhccHHHHHHHHHHHHhhccceeEEE Q lcl|Aclame:pro 1 MSF---FQPLGT----------------SKVSYDDYISSVLAGDVSQ-KYLGVSALKNSDILTATSIIAGDIARFPLVKK 60 (406) Q Consensus 1 M~~---f~~~~~----------------~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 60 (406) .++ |.-.-+ +..+.+. + .|..+..-. +..-....+.|.+++|+..|++.+.+- |... T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l-~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~-w~~~ 143 (695) T protein:vir:78 67 LRLARQFEVDVSNYTPRERRAASYALDFNGTSMDA-L-SFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRT-WGEA 143 (695) T ss_pred cccceeceeccccCCccccchhhhhhccccccccc-c-hhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcc-ccee Confidence 111 110000 0001111 1 111111111 111122357888899999999888765 5322 Q ss_pred e-cCCc------------ccc--cchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC------------- Q lcl|Aclame:pro 61 D-VNGD------------IIH--DEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK------------- 112 (406) Q Consensus 61 ~-~~~~------------~~~--~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~------------- 112 (406) . ...+ ... +..-...|...-..+.-+.-|.+.+.+. -++|-+.+++..+.. T Consensus 144 ~~~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erL~V~~~l~eaik~a-RlfGGa~~~i~i~gdd~~l~~PL~~~~~ 222 (695) T protein:vir:78 144 IGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHD-QAFGRAHPYFKIKGDDQIMDTPLVPRPY 222 (695) T ss_pred ccccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccceEEEEEeccCccccccccccccc Confidence 1 1111 111 1112223433333333333444444444 467877776654322 Q ss_pred ---CceeEEEeecCCeeEEEEEcc--------CcceEEEEEeecCCeEEEEcceeeEeeccCC-------CCCccccCHH Q lcl|Aclame:pro 113 ---TNQALQFQFYRPSETTVEETD--------NHEIVYTFTDMLTAKQVKCFAHDVIHWKFFS-------HDTILGRSPL 174 (406) Q Consensus 113 ---~g~~~~l~~l~p~~~~~~~~~--------~g~~~~~~~~~~~g~~~~~~~~~vih~r~~~-------~~~~~G~s~~ 174 (406) .|....+..++|+++.+...+ .+.+.|++.. | .++-.+.++.|...+ ...+.|+|.. T Consensus 223 ~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~---G--~kIH~SRL~~f~g~plPd~LKp~y~~~GiSv~ 297 (695) T protein:vir:78 223 TVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI---G--TEVHATRLHTIVSRPVGDMLKPTYSFAGISMT 297 (695) T ss_pred cccCcceeeeEeecccccccchhhhccchhhccCCCceEEEe---c--eEEeeeeEEEecCCCchhhhhcccccCcccHH Confidence 245566888899888875432 2334344331 2 246666666665433 1235699999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHH--HHHHHhcccccCceeecc-CCceeeeccCCh Q lcl|Aclame:pro 175 LSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQ--EFEKMREGSVGGSPLVFD-STMEYTPLEIDT 251 (406) Q Consensus 175 ~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~--~~~~~~~g~~~~~~~vl~-~g~~~~~l~~~~ 251 (406) +.+...+..+.........+...-............+.+.....+.. .+-+++.+ | .++.+++ ..-+|++.+.+. T Consensus 298 q~~~e~V~~~~rT~~~v~~Li~~~~v~~lk~dla~~L~~g~~~~l~~R~eli~~~Rs-n-~G~~llDk~~Eefeq~stsl 375 (695) T protein:vir:78 298 QLAMPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALMPGANVDLSMRAELINRYRD-N-RNILFLDKATEEFFQFNTPL 375 (695) T ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhhHHHHHHHHHhhcChhHHHHHHHHHHHHHhcC-c-cceEEEecCCcceEEEeccc Confidence 99999999888888777777655333322111112222222223333 33344442 3 4577888 478999988666 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCHHHh-cccc-----cc----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchh Q lcl|Aclame:pro 252 NVLQLITSNNFSTAQIAKALRVPSYKL-GVNS-----PN----QSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRR 321 (406) Q Consensus 252 ~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g~~~-----~~----~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~ 321 (406) ..++ +........||.+-+||-..| |.+. |+ .|+-+.-+...+.-|+|.++.+-+.+-+..|+..+. T Consensus 376 SGLd--dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~idp- 452 (695) T protein:vir:78 376 SGLD--ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAVDP- 452 (695) T ss_pred CCHH--HHHHHHHHHHHhhhcCchhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC- Confidence 5543 344455567999999998876 3322 21 344555566667789999999988887777765543 Q ss_pred hhhhhhcc--cchhH-------HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcc---ccccc Q lcl|Aclame:pro 322 LYHIEFDT--RSVTG-------RNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE---EYQDK 389 (406) Q Consensus 322 ~~~~~~~~--~~~~~-------~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~---~~~~~ 389 (406) .+.++|+. ..+.+ ++++....+++.|+++++|+|..+.-+|-. +.+..+ ..+-.|.-..+ ..... T Consensus 453 di~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s-~Y~~~~--D~~d~p~~~~~~~~~~~~~ 529 (695) T protein:vir:78 453 SIKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDG-PYAGKL--DANDDPGVPADDDIDGVLT 529 (695) T ss_pred cceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCc-cccccc--ccccCCCcCccchhhhhHh Confidence 35556652 22222 345556678899999999999999887642 222111 12222111000 00001 Q ss_pred cC-cccCCCccCCCCCCC Q lcl|Aclame:pro 390 VG-IKGKGGEVNAEEDKS 406 (406) Q Consensus 390 ~~-~~~~gg~~~~~~~~~ 406 (406) .. ...+|++ -++..+. T Consensus 530 ~~~~~~~~~~-~~~~~~~ 546 (695) T protein:vir:78 530 YVQRLAEGGD-TGAPGGA 546 (695) T ss_pred hhcCcccccc-cCCCCCC Confidence 11 1111111 1111111 No 136 >protein:vir:95254 Length: 488 # NCBI annotation: Phage conserved protein # Family: family:all:2372 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944885;genbank:gi:158267601;genbank:GeneID:2744039 Probab=99.47 E-value=4.9e-12 Score=82.61 Aligned_cols=400 Identities=10% Similarity=0.005 Sum_probs=205.1 Q ss_pred CcccccccCCCCcc--hhhHHHhhcCCcccc--------------cchhhhhccHHHHHHHHHHHHhhccceeEEEecCC Q lcl|Aclame:pro 1 MSFFQPLGTSKVSY--DDYISSVLAGDVSQK--------------YLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG 64 (406) Q Consensus 1 M~~f~~~~~~~~~~--~~~~~~~~~~~~~~~--------------~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 64 (406) |.=-....+.-.+. .+.......+..+.. -.-+..++.+.|.+|++.+...|.+++|.|...++ T Consensus 1 ~~~~~~~~~gl~p~rl~~i~~~~~~~~~~~~~~~~~~~Lr~~~~~~ly~~m~~D~hi~s~l~~Rk~av~~~~w~v~p~~~ 80 (488) T protein:vir:95 1 MADITETQESLPPFRMGEVGSLGLKVKNGRIYEEPRQALRFPESIKTFQLMMRDPAVAASVNIIKMFVRKVNWRFVPPKG 80 (488) T ss_pred CCCccccCCCCCHHHHHHHHHHhhccccchhhccchhhhcccchHHHHHHHhhChHHHHHHHHHHHHHhcCCceEecCCC Confidence 32211111111110 011111111112111 11123456888999999999999999999975443 Q ss_pred ccccc--chHHHHhhhh-ccccCCHHHHHHHHHHHHHhcCCceEEEEecCC------------Cce--eEEEeecCCeeE Q lcl|Aclame:pro 65 DIIHD--EDINYLLNVK-STSNASARTWKFAMAVNAILTGNSFSRILRDPK------------TNQ--ALQFQFYRPSET 127 (406) Q Consensus 65 ~~~~~--~~~~~lL~~~-Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~------------~g~--~~~l~~l~p~~~ 127 (406) ..... ...+..+... -+...++.++++.++ +.+.+|-++.++++... +|+ |..+.+-++... T Consensus 81 ~~~d~~~~~~a~~v~~~l~~~~~~~~~~i~~~l-da~~~G~s~~Eivw~~~~~~~~~~~~~~~dg~~~~~~i~~Rpq~~~ 159 (488) T protein:vir:95 81 KEQDPKMLERADFFNSLMDDMEHDWADFINSVM-SFCTYGFCVNEKVYKKRQGKKGKYQSKFDDGLIGWAKLPIRNQSTL 159 (488) T ss_pred CchhHHHHHHHHHHHHHHhccCccHHHHHHHHH-HhhcccceeeeeeeeccccccccccccccCCeeeeeeeeecCcccc Confidence 32111 1122333221 122345667777775 56788999999988643 232 444444444321 Q ss_pred -EEEEccCcceEEEEEee--------------cCCeEEEEcceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 128 -TVEETDNHEIVYTFTDM--------------LTAKQVKCFAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTL 191 (406) Q Consensus 128 -~~~~~~~g~~~~~~~~~--------------~~g~~~~~~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~ 191 (406) .+..+.++..+....+. .......+|+...++.++.+.. .++|.+.+..|.-..-......++- T Consensus 160 ~~f~~d~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~kfi~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w 239 (488) T protein:vir:95 160 DKWYFDEDFRRVTGVRQNLRNVSHIAGAINLGERPLTRKLPRAKFMLFKYDDEYGNPEGRSPLLNAYVPWKYKVQIEEYE 239 (488) T ss_pred cceeeccCCCceeecccccccccccccccccccccccccccccceEEEeecCCCCccchhhHHHHHHHHHHHHHHHHHHH Confidence 22333444433222111 1122345777777766766544 4799999999999998888888888 Q ss_pred HHHHhcCCCcceEEeec----CCCCHHHHHHHHHHHHHHhc----ccccCceeeccCCceeee---------ccCC-hhH Q lcl|Aclame:pro 192 IKFFKDGFSSGILTMKG----AQLSGDARQRARQEFEKMRE----GSVGGSPLVFDSTMEYTP---------LEID-TNV 253 (406) Q Consensus 192 ~~~~~ng~~~~~~~~~~----~~~~~e~~~~~~~~~~~~~~----g~~~~~~~vl~~g~~~~~---------l~~~-~~d 253 (406) ..+.+.-+.|--+...+ ...++++.+.+.+...++.. +..++ ++++.|+++.. ++.. ..- T Consensus 240 ~~f~Er~g~g~p~~~~p~~~~~~~~~~e~~~l~~a~~~i~~~~~~~~~ag--~iiP~g~~~~~k~~~~e~~l~~~~~~~~ 317 (488) T protein:vir:95 240 AVGVSRDLVGMPKIGLPPDYLDENAEPEKKAFVQYCKTVVNDMIANDRAG--LIWPRYIDPDTKEDIFEFSLVSRQGAKA 317 (488) T ss_pred HHHHHHhcccceeEeeccCCCCCcccHHHHHHHHHHHHHHHHhhccchhh--eeeccccccccchhhhhhhccccccCCc Confidence 88887643333333322 23444555555555554432 22233 45666654322 2221 223 Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHhcccccchhH-HHHHHHHHHHHHHHHHHHHHHHHHhhccCcc------c-hhhhhh Q lcl|Aclame:pro 254 LQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSV-AQLMEDYVTNDLPFYFDAITSELGLKTLNDK------D-RRLYHI 325 (406) Q Consensus 254 ~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~-~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~------~-~~~~~~ 325 (406) ..|.+..++..++|+++.--.---.+....+++. .+.........+.-.++.|++.||+.|+.+. . ...-.+ T Consensus 318 ~~~~~li~~~d~~Isk~iLGqtLT~~~~~~Gs~Al~~vh~ev~~~i~~aDa~~i~~tln~~li~~l~~~Nfg~~~~~P~~ 397 (488) T protein:vir:95 318 YDTGSIIDRYSKQIMMAFMSDVLAMGQSKYGSFSLADSKTSLLAMSVDILLKQIKNVINRDLVAQTYALNMWDDEEHVQI 397 (488) T ss_pred hhHHHHHHHHHHHHHHHHhccccccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEE Confidence 3466777788888886652221111111112222 3445566778888899999999999776532 1 111234 Q ss_pred hhcc--cchhHHHHHHHHHHHhCCCcCH-----HHHHHHhCCCCCCCCCCCeeeeccCccchhhccc-cccccC-----c Q lcl|Aclame:pro 326 EFDT--RSVTGRNVDEIVKLVNNQILTP-----NQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEE-YQDKVG-----I 392 (406) Q Consensus 326 ~~~~--~~~~~~~~~~~~~~~~~g~~t~-----NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~-~~~~~~-----~ 392 (406) .|+. ..|+++.++.+.++++.|+.-+ +.+|+.+|+|+- +.+.....+.--.+...... ...... . T Consensus 398 ~~~~~e~~Dl~~~ae~~~~L~~~G~~i~~~~~~~~i~e~~gip~~--~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (488) T protein:vir:95 398 TYDDIETPDLEAIGSYIQKTVAVGALEVDKELSNKLREHIGLPPA--DESQPVSEKLSPNSQSRSGDGYKTAGEGTAKTP 475 (488) T ss_pred EecCcChhhHHHHHHHHHHHHhCCCccccHHHHHHHHHHhCCCCC--CCCccccccCCCCCCCCCCcccCCCcccCCccc Confidence 4443 4567888899999999998654 679999999964 23333332221110000000 000000 0 Q ss_pred ccCCCccCCCCCC Q lcl|Aclame:pro 393 KGKGGEVNAEEDK 405 (406) Q Consensus 393 ~~~gg~~~~~~~~ 405 (406) ..+.+..-++..+ T Consensus 476 ~~~~~~~a~~~~~ 488 (488) T protein:vir:95 476 SAKDPSTANKANK 488 (488) T ss_pred ccccchhhhhccC Confidence 0000000000000 No 137 >protein:vir:6382 Length: 553 # NCBI annotation: portal protein Lambda B # Family: family:all:47 # MgeID: mge:133 # MgeName: BcepNazgul # Cross-refs: genbank:acc:NP_918995;genbank:gi:34610170;genbank:GeneID:2559575 Probab=99.46 E-value=2.5e-13 Score=89.68 Aligned_cols=404 Identities=10% Similarity=-0.036 Sum_probs=209.3 Q ss_pred Cc--------cccc-----------ccC-CCCcchhhHHHhhcCCccc------------ccchhhhhccHHHHHHHHHH Q lcl|Aclame:pro 1 MS--------FFQP-----------LGT-SKVSYDDYISSVLAGDVSQ------------KYLGVSALKNSDILTATSII 48 (406) Q Consensus 1 M~--------~f~~-----------~~~-~~~~~~~~~~~~~~~~~~~------------~~~~~~a~~~~~v~~~i~~i 48 (406) |. .+.+ ... .....+..+..|.....+. .-.+.-+..++.+.++|+.+ T Consensus 1 m~~~~~r~~~~~a~~~~~~~~~~~~~~y~gA~~~~r~~~~w~~~~~s~~~~~~~~~~~lr~RaRdL~rNn~~a~~av~~~ 80 (553) T protein:vir:63 1 MTKVTVRKLSEVTSGRPEQSASLGGGGLEGASRLSRETVSWNPSLRSPDALINPLKRIADARGRDMADNDGFTNGAVGYQ 80 (553) T ss_pred CcchhhhhhcccccccchhhhhhhcccccccccCCCcccccccCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH Confidence 11 0000 000 0000011111111111110 11112234677788889988 Q ss_pred HHhhccceeEEEec-CC------cccccc----hHH---HHhhhhcc------ccCCHHHHHHHHHHHHHhcCCceEEEE Q lcl|Aclame:pro 49 AGDIARFPLVKKDV-NG------DIIHDE----DIN---YLLNVKST------SNASARTWKFAMAVNAILTGNSFSRIL 108 (406) Q Consensus 49 a~~ia~~~~~~~~~-~~------~~~~~~----~~~---~lL~~~Pn------~~~~~~~f~~~~~~~~~l~G~~~~~i~ 108 (406) ...+-.-.+...-. +. ...... .+. ...-.+++ -.++.+++...++..++..|++|+.++ T Consensus 81 ~~nvVG~Gi~~~~~~~~~~l~g~~~~~~~~~~~~ie~~w~~wa~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~~~ 160 (553) T protein:vir:63 81 RDSIVGAQYRLNSMPDINVIPGATEEWAEEYQTIVEAKFELYAESLACYIDNAAISTFTGLIRLGVVGYVKTGEVLATAE 160 (553) T ss_pred HHhhccCCceeeeccchhhhcCCCHHHHHHHHHHHHHHHHHhcCCccceeeccccCCHHHHHHHHHHHHHhCCceEEEee Confidence 77765555654321 10 111111 111 22223333 446788889999999999999999887 Q ss_pred ecCCCce--eEEEeecCCeeEEE--------------EEccCcceE-EEEEeecCC----------------eEEEEcce Q lcl|Aclame:pro 109 RDPKTNQ--ALQFQFYRPSETTV--------------EETDNHEIV-YTFTDMLTA----------------KQVKCFAH 155 (406) Q Consensus 109 ~~~~~g~--~~~l~~l~p~~~~~--------------~~~~~g~~~-~~~~~~~~g----------------~~~~~~~~ 155 (406) +....|. +..|..|+|+.+.. ..+..|.++ |++.....| ....+++. T Consensus 161 ~~~~~~~~~~~~lq~ie~drl~~~~~~~~~~~i~~GVE~d~~Gr~vaY~i~~~hPgd~~~~~~~~~~~~r~~~~~~v~a~ 240 (553) T protein:vir:63 161 WDRAANRPYATCFQMVSTDRLSNPYQQLDTPTLRRGVQYDKRGRPQGYWIQVAHPGDLYQMAPDMYKWKFVQQSKPWGRR 240 (553) T ss_pred eccCCCCcccceEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEeeccCCCccccccccccceeeeccccccChh Confidence 7654443 45677787776642 233334433 333322222 12347788 Q ss_pred eeEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHH-------------- Q lcl|Aclame:pro 156 DVIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRAR-------------- 220 (406) Q Consensus 156 ~vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~-------------- 220 (406) +|+|+...- .....|+|.+..+...+.......+......+-.+...++++.+.. +....+.+. T Consensus 241 ~vlH~f~~~r~gQ~RGis~lapvl~~l~~l~~y~daeL~~a~i~A~~a~fi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 319 (553) T protein:vir:63 241 QVIHILEPREPDQSRGIADIVSGLKDMRMAKRFKEMSLQNAVINASYAAAIESELP-PEFIHSQMSGGSPNADMVGIFGK 319 (553) T ss_pred HheecccccCCCcccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCC-hhhhhhhcccccccccccccccc Confidence 999998653 4568999999999888887777776666655555555556554321 111111111 Q ss_pred --HHHHHHhcc-----cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHh-cc--cccchhHH-- Q lcl|Aclame:pro 221 --QEFEKMREG-----SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKL-GV--NSPNQSVA-- 288 (406) Q Consensus 221 --~~~~~~~~g-----~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g~--~~~~~n~~-- 288 (406) +.....+.| -..|.+..|..|.+++.++.+-...+|.+..+...+.||+.+|||.+.| |. ..+||++. T Consensus 320 ~~~~~~~~~~~~~~~~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~F~~~~lr~iaaglGi~Ye~lt~D~s~~nYSS~R~~ 399 (553) T protein:vir:63 320 YMDALKAYVGGANNIQIDGAKIPHLFPGTKLNLKPMGTPGGVGSEFEASLNRHLASAFGMSYEEFTRDFSKANYSSIQAG 399 (553) T ss_pred cccccccccccccceeecCceeeecCCCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcccccHHHHHHH Confidence 111111111 1235577889999999988876667888999999999999999999987 33 23565542 Q ss_pred ---------HHHHHHHHHHHHHHHH-HHHHHHHhhccCccc--hhhh-----------hhhhc----ccchhHHHHHHHH Q lcl|Aclame:pro 289 ---------QLMEDYVTNDLPFYFD-AITSELGLKTLNDKD--RRLY-----------HIEFD----TRSVTGRNVDEIV 341 (406) Q Consensus 289 ---------~~~~~~~~~~i~P~~~-~ie~~l~~~l~~~~~--~~~~-----------~~~~~----~~~~~~~~~~~~~ 341 (406) ..+..|....++|+.+ .+++++-+..++... ..++ .+++- ...|..+.+++.. T Consensus 400 ~~e~~r~~~~~q~~~~~~~~~pi~~~wl~~a~l~G~i~~p~~~~~~~~~~p~~~~a~~~~~w~~p~~~~iDP~Ke~~A~~ 479 (553) T protein:vir:63 400 IAMTRRFLEGRKKMCADRLATEFFTLWLEEAIAAGEVPMPPGQTRDLFYQPLMKEALSKCEWIGASQGQIDQLKETQAAV 479 (553) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccchhhcchhhhhhhhceeeecCCccccChHHHHHHHH Confidence 2233445555666443 345555443332211 1111 11111 1236778888999 Q ss_pred HHHhCCCcCHHHHHHHhCCCCCCCC--------CCCeeeeccCccchhhccccccccCcccC--CCccCCCCCC Q lcl|Aclame:pro 342 KLVNNQILTPNQGLVELGKQKSTDP--------NMDRYQSSLNYVFLDKKEEYQDKVGIKGK--GGEVNAEEDK 405 (406) Q Consensus 342 ~~~~~g~~t~NE~R~~~g~~p~~~~--------~gd~~~~~~n~~~~~~~~~~~~~~~~~~~--gg~~~~~~~~ 405 (406) ..+.+|+.|.-|+-...|.+|-+-- -.+++=++.+..|-......+.+...... ..+.++++.+ T Consensus 480 ~~i~~G~~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 553 (553) T protein:vir:63 480 MRIDAGLSTYEREIARLGGDFRKSFAQRAREDALLKKYGLTFNLSAKRSLGDGRDAATGIAEDPAAAQTSQQGE 553 (553) T ss_pred HHHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCCCCCCccccCCCcccCCCCCCCCCCCCcccccC Confidence 9999999999998888888864110 00111111121111111111111111111 1112222222 No 138 >protein:vir:78161 Length: 355 # NCBI annotation: hypothetical protein # Family: family:all:2372 # MgeID: mge:1847 # MgeName: Min1 # Cross-refs: genbank:acc:YP_001294798;genbank:gi:149882819;genbank:GeneID:5309189 Probab=99.46 E-value=4.1e-13 Score=88.49 Aligned_cols=296 Identities=10% Similarity=0.042 Sum_probs=172.2 Q ss_pred eEEEEecCCCce--eEEEeecCCeeEE-EEEccCcceEEEEEee-cCCeEEEEcceeeEeeccCCCC-CccccCHHHHHH Q lcl|Aclame:pro 104 FSRILRDPKTNQ--ALQFQFYRPSETT-VEETDNHEIVYTFTDM-LTAKQVKCFAHDVIHWKFFSHD-TILGRSPLLSLG 178 (406) Q Consensus 104 ~~~i~~~~~~g~--~~~l~~l~p~~~~-~~~~~~g~~~~~~~~~-~~g~~~~~~~~~vih~r~~~~~-~~~G~s~~~~~~ 178 (406) +.++++...+|+ |..+.+.++..+. ...+.++++....... .++....+++...|+.++.... .++|.+.+..|+ T Consensus 1 v~Eivw~~~~g~~~~~~l~~r~~~~~~~f~~~~~~~l~~~~~~~~~g~~~~~lp~~kfi~~~~~~~~g~p~G~gLlr~~~ 80 (355) T protein:vir:78 1 MFEQVYRIENGRARLGKLAWRPPRTISRFDVAPDGGLVAIEQWGVFGKATVRIPVDRLVVFVNEREGANWLGQSLLRQAY 80 (355) T ss_pred CeEEEEEeeCCeEEEeeeeecCccceeeeeeccCCceeEEEecCCCCCCcceeccCCEEEEEeCCCCCCccchhhHHHHH Confidence 677888766663 6677778877554 3455555554333332 2334567888888877776544 489999999999 Q ss_pred HHHHHHHHHHHHHHHHHhcCCC--cceEEeecCCCC-----------HHHHHHHHHHHHHHhcccccCceeeccCCceee Q lcl|Aclame:pro 179 DEIDLQTGGINTLIKFFKDGFS--SGILTMKGAQLS-----------GDARQRARQEFEKMREGSVGGSPLVFDSTMEYT 245 (406) Q Consensus 179 ~~i~~~~~~~~~~~~~~~ng~~--~~~~~~~~~~~~-----------~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~ 245 (406) -..-......+.-..+.+.-+. |-++.......+ .++++.+.........|.++ .++++.|++++ T Consensus 81 w~~~fK~~~~~~w~~f~Er~g~g~p~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~i~~g~~a--~~iip~g~~ie 158 (355) T protein:vir:78 81 KNWLLKDRFLRIQALVGERNGLGVPIYQGAPLPEAIARDTARAEQWLNDQKEEGLQLAKEFRAGEAA--GGYIPHGANFT 158 (355) T ss_pred HHHHHHHhhHHHHHHHHHHcCCCceEEEecCCCCcccchhhhHHHHHHHHHHHHHHHHHHhhCCcce--eEeecCCceEE Confidence 9999999999999999887543 333333222221 22233333333333344333 56789999888 Q ss_pred eccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccccc-ch-hHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc----- Q lcl|Aclame:pro 246 PLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSP-NQ-SVAQLMEDYVTNDLPFYFDAITSELGLKTLNDK----- 318 (406) Q Consensus 246 ~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~-~~-n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~----- 318 (406) -+.......++.+..++..++|+.++.-.---.+..+. ++ ...+.........+.-.++.|++.||+.|+.+. T Consensus 159 ~~ea~g~~~~~~~~i~~~d~~Isk~iLGqtlTs~~~~~gGS~Alg~vh~~v~~~~~~aD~~~i~~~ln~~li~~l~~lN~ 238 (355) T protein:vir:78 159 LTGVQGKLPEMDGPIRYHDEQIARAVLAHFLTLGGDKSTGSYALGDTFASFFTGSLNAVMKHIADVTQQHVVEDLVDQNW 238 (355) T ss_pred EeecCCCcccHHHHHHHHHHHHHHHHhhhhhccccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC Confidence 87665555667888889999998776443222222222 22 223445677778888899999999998775531 Q ss_pred -c-hhhhhhhhc-ccchhHHHHHHHHHHHhCCCcCHH-----HHHHHhCCCCCCCCCCCeeeeccC-ccchhhccccccc Q lcl|Aclame:pro 319 -D-RRLYHIEFD-TRSVTGRNVDEIVKLVNNQILTPN-----QGLVELGKQKSTDPNMDRYQSSLN-YVFLDKKEEYQDK 389 (406) Q Consensus 319 -~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~t~N-----E~R~~~g~~p~~~~~gd~~~~~~n-~~~~~~~~~~~~~ 389 (406) . ...-.+.|+ ...+.++.++.+..+++.|+.-++ .+|+.+|+|.- +.++....+.. ..+........ T Consensus 239 ~~~~~~P~~~~~~~~~~~~~~a~~~~~l~~~G~~~~~~~~~~~~~e~~gip~p--~~~~~~~~~~~~~~~~~~~~~~~-- 314 (355) T protein:vir:78 239 GPEEPAPRLVPAQLGKEQPVTAEAIRALVECGAFTADPELEKDLRARYGLPAP--AERDDGADAAAAKAAGRRRAKRL-- 314 (355) T ss_pred CCCCCCCEEEecCcChhHHHHHHHHHHHHhCCCccccHHHHHHHHHHhCCCCC--CCCCcccCCcccccccccccccc-- Confidence 1 111223443 334556778889999999997654 57999999753 22333322211 11111111000 Q ss_pred cCcccCCCccCCC----CCCC Q lcl|Aclame:pro 390 VGIKGKGGEVNAE----EDKS 406 (406) Q Consensus 390 ~~~~~~gg~~~~~----~~~~ 406 (406) .+...+++.... .+.. T Consensus 315 -~~~~~~~~~~a~~~~a~~~~ 334 (355) T protein:vir:78 315 -PGQRQGAALPSRSPRADPPR 334 (355) T ss_pred -CCccccccccccCCCCCChh Confidence 001111111111 1111 No 139 >protein:vir:105782 Length: 449 # NCBI annotation: gp5 # Family: family:all:6783 # MgeID: mge:1501 # MgeName: ES18 # Cross-refs: genbank:acc:YP_224143;genbank:gi:62362218;genbank:GeneID:3342535 Probab=99.39 E-value=5e-13 Score=88.04 Aligned_cols=364 Identities=10% Similarity=-0.007 Sum_probs=167.9 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchh--h--hhccHHHHHHHHHHHHhhccceeEEEecCCcccccc--hHHH Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGV--S--ALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDE--DINY 74 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~--~~~~ 74 (406) |+|.+.........+..+..+ |. ....+.. . +-.++.+..+|+++++.+-.--..+...+....... .+.. T Consensus 23 d~l~~~~~glg~~r~~~~~~~--g~-~~~~~~~~l~~~Yr~~~ia~~iVd~~~d~~~~~~~~i~~g~~~~~~~~~~~~e~ 99 (449) T protein:vir:10 23 MGLMVPTMGLDNKRHSAWCEY--GF-PELVTYENLYSLYRRGGIAHGAVEKLVGKCWQTNPEIIEGDDADDSEDETSWEK 99 (449) T ss_pred HHHHHHHhcCCcccchhhhhc--CC-cccCCHHHHHHHHhcCchhHHHHHhhhhhhhhcCcccccCccccchhhhHHHHH Confidence 333322111110111111111 11 1111111 1 124566778899998766322112222221111111 1111 Q ss_pred HhhhhccccCCHHHHHHHH---HHHHHhcCCceEEEEe-cCC--------CceeEEEeecCCeeEEEEE-------ccCc Q lcl|Aclame:pro 75 LLNVKSTSNASARTWKFAM---AVNAILTGNSFSRILR-DPK--------TNQALQFQFYRPSETTVEE-------TDNH 135 (406) Q Consensus 75 lL~~~Pn~~~~~~~f~~~~---~~~~~l~G~~~~~i~~-~~~--------~g~~~~l~~l~p~~~~~~~-------~~~g 135 (406) .+. +-+. ..+|..+ ...-.++|-+.+++.. |.. ++.+..+.|+....+.+.. .+.| T Consensus 100 ~~~-~l~~----~~~~~~l~ea~~~~rl~Gga~i~i~v~d~~~l~~Pl~~~~~i~~i~v~~~~~i~~~~~~~dp~sp~yg 174 (449) T protein:vir:10 100 KSK-QVFT----NRLWRSFAEADRRRLVGRYAGILLHIRDEKDWNLPATKGRGLQKVSVSWAGSLKVAEWDTGINSKTYG 174 (449) T ss_pred HHH-HHHH----HHHHHHHHHHHHhhhccCcEEEEEEecCCCCCCcccccCcceeeEEeeccccCChhhhhcCCCCCCCC Confidence 111 0000 1333332 2223467877777654 321 1345556666544443321 1224 Q ss_pred ceEEEEEe-e---cCCeEEEEcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHH-HHHHHHHhcCCCc--------- Q lcl|Aclame:pro 136 EIVYTFTD-M---LTAKQVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGI-NTLIKFFKDGFSS--------- 201 (406) Q Consensus 136 ~~~~~~~~-~---~~g~~~~~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~-~~~~~~~~ng~~~--------- 201 (406) .+.++... . .....+.+.++.|+||...+ .-|.|.++.+++.+.....+. .+...++++..+- T Consensus 175 ~P~~y~v~~~~~g~~~~~~~iH~SRl~~~~~~~---~~g~~~L~~~yn~l~~~~~~~~~~a~~~l~~~~rq~~~~~~~~~ 251 (449) T protein:vir:10 175 QPKLWKYTERLPNGSSRRVDIHPDRVFILGDYS---EDAIGFLEPAYNAFVSLEKVEGGSGESFLKNAARQLNVNFEKEI 251 (449) T ss_pred CceEEEEeeeccCCCccceeeccceeEeecCCC---CCChhHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHhhhhhhhh Confidence 44444322 1 12234568888888875433 337788888877654333332 1222223321110 Q ss_pred --ceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHh- Q lcl|Aclame:pro 202 --GILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKL- 278 (406) Q Consensus 202 --~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~l- 278 (406) ..+....+...++..+++.+++.....|.+ .++++.+-+++.++.++.+.. +.......+||.+-+||-..| T Consensus 252 ~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~---~~~i~~~~d~~~~~~~~sgl~--d~l~~~~q~iaaa~~IP~t~L~ 326 (449) T protein:vir:10 252 DFTNLASLYGVSIDELQDKFNEVAGEINRGND---VLMTTQGATVTPLVTSVADPT--ATYNVNLQTAAAGVDIPTRILI 326 (449) T ss_pred hhhhhhHHhhCCchHHHHHHHHHHHHHhccch---heeecCCcceEEEecccCChh--HHHHHHHHHHHHHhCCCeeeee Confidence 011111122233344555555555544432 355677778998888776553 445556677999999998887 Q ss_pred cccccc-------hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcc--cchhH-------HHHHHHHH Q lcl|Aclame:pro 279 GVNSPN-------QSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT--RSVTG-------RNVDEIVK 342 (406) Q Consensus 279 g~~~~~-------~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~ 342 (406) |.+..+ .|..+..... +.-|.|.++.+-+.|-+.-+.... ..+.++|.. .++.+ +.++++.. T Consensus 327 Gqsp~glnst~D~~nyyd~i~~~-Q~~l~p~le~l~~~l~~s~~g~~~-~d~~i~f~pL~~~t~kEkAei~k~~A~a~~~ 404 (449) T protein:vir:10 327 GNQQAERSSTEDQKYFNARCQSR-RVDLSFEIEDFCDKLIELKIIDAV-AKKAVIWDDLNEQTGTEKLTNAKTMGEINQT 404 (449) T ss_pred ccCccccccchhHHHHHHHHHHH-HHhhhHHHHHHHHHHHHhhcCCCC-CceeEEeCCCCCCCHHHHHHHHHHHHHHHHH Confidence 322211 1222222222 234788888888777554443332 246666642 22222 33556667 Q ss_pred HHhCC---CcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 343 LVNNQ---ILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 343 ~~~~g---~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) ++++| +++.+|+|+.+|++|..+.. + ..+..++++++..+ T Consensus 405 ~~~ag~~~~~~~~EiR~~~~~~~~~~~~---~---------------------~~e~~de~~~~~d~ 447 (449) T protein:vir:10 405 MLGSGDNPAFSREEIRTAAGYDNDDEEP---L---------------------GEEDGDEEDKATDS 447 (449) T ss_pred HHHccccCCcCHHHHHHHhcccCCCCCC---C---------------------CCCCCccccccCCc Confidence 77766 89999999999999863211 0 00011111111111 No 140 >protein:vir:106491 Length: 646 # NCBI annotation: Pas4 # Family: family:all:2798 # MgeID: mge:1680 # MgeName: phiAsp2 # Cross-refs: genbank:acc:YP_024790;genbank:gi:48697405;genbank:GeneID:2846148 Probab=99.34 E-value=6.1e-13 Score=87.55 Aligned_cols=399 Identities=12% Similarity=0.082 Sum_probs=215.5 Q ss_pred CcccccccCCCCcchh---hHHHhhcCCccc----------ccchhh-----h---h-ccHHHHHHHHHHHHhhccceeE Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDD---YISSVLAGDVSQ----------KYLGVS-----A---L-KNSDILTATSIIAGDIARFPLV 58 (406) Q Consensus 1 M~~f~~~~~~~~~~~~---~~~~~~~~~~~~----------~~~~~~-----a---~-~~~~v~~~i~~ia~~ia~~~~~ 58 (406) |.+++++++...++.. .-..+...+... ...... | + ..|.+...+..|++.+|++.+. T Consensus 1 ~~~~rPk~~p~~p~~~~~arrr~LtaAsa~l~~~~~~~~kt~~~~~~~WQ~eAW~~~d~vpELry~vgW~~~a~SR~rL~ 80 (646) T protein:vir:10 1 MALLKPKSAPPEPFGAEVARRIALAGATAQVDLGASSSWKTWKFGNKDWQTEGWRLYDIIPEHHFLAGRIGDSVAQARLY 80 (646) T ss_pred CcccCCCCCCCCcccccccchhhhhhccccccCCCcceeecCCCcchhhhHHHHHHHhhhhhHhhHhhhhhhhhceeeee Confidence 9999998765533211 001111111000 001111 1 1 2356677788999999999998 Q ss_pred EEecCCc-----ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEE---ecCCCceeEEEeecCCeeEEEE Q lcl|Aclame:pro 59 KKDVNGD-----IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRIL---RDPKTNQALQFQFYRPSETTVE 130 (406) Q Consensus 59 ~~~~~~~-----~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~---~~~~~g~~~~l~~l~p~~~~~~ 130 (406) .-+.+.. ....+.+..+....--.-....++++.+..++.+-|++|+... ....++ --..+++..+.+.. T Consensus 81 aseiddtG~~tg~v~~~~v~~iv~~~~Gg~~gQ~qlLkr~~~~ltV~GE~wiv~~~~~~~~~~~-~~~W~vvt~~Ev~~- 158 (646) T protein:vir:10 81 VTEVDDTGEETGEVQDERIKRLAAVPLGTGSQRDDNLRLAGLDLAVGGECWIVGEGAATSPEAA-EGSWFVVTGSAISR- 158 (646) T ss_pred eeeecCCCCCcCccchHHHHHHhhhhccchhhHHHHHHHHHhheecccceEEeeccccCCCCCC-ccceeeecHHHhcc- Confidence 7654422 2223344444433233334446899999999999999998631 111222 12233444444421 Q ss_pred EccCcceEEEEEeec-CCeEEEEcceeeEeec---cCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEe Q lcl|Aclame:pro 131 ETDNHEIVYTFTDML-TAKQVKCFAHDVIHWK---FFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTM 206 (406) Q Consensus 131 ~~~~g~~~~~~~~~~-~g~~~~~~~~~vih~r---~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~ 206 (406) . .+.....-.... .+..+.++..+++ || .++.....--||+.+++..+.-.....+...+..+.....++++. T Consensus 159 -t-g~~~~i~~p~~~~g~~~v~~~~~d~l-vRiW~P~Prr~~epDSpvra~l~~l~Ei~~lt~~I~aaakSRL~GnGvLf 235 (646) T protein:vir:10 159 -T-GDEIAVRRPQQRGGSKLVLVDGQDIL-IRCWRPHPNDTDQADSFTRSAIVPLREIELLTKREFAELDSRLTGAGIMF 235 (646) T ss_pred -C-CCeeeeecCccCCCCCcceecCCceE-EEEecCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHHHHHhcCceee Confidence 1 111111111111 3333445556663 34 234455678899999999999988888888888887777777777 Q ss_pred ecCCCC-------HHHHHHHHHHHHHHh----cc--cccC-ceeeccC-Cc------eeeeccCCh-hHHHHHHHHHHHH Q lcl|Aclame:pro 207 KGAQLS-------GDARQRARQEFEKMR----EG--SVGG-SPLVFDS-TM------EYTPLEIDT-NVLQLITSNNFST 264 (406) Q Consensus 207 ~~~~~~-------~e~~~~~~~~~~~~~----~g--~~~~-~~~vl~~-g~------~~~~l~~~~-~d~~~~e~~~~~~ 264 (406) .+..++ +.....+.+.|.+.. .. +.+- -++++.. |. +++.++... -+.--+.+++..+ T Consensus 236 vP~e~s~p~~~~~~a~~~~l~~~l~qaa~tAi~De~S~aA~vPiia~~P~E~i~~~~~ik~l~f~~eite~aiktR~daI 315 (646) T protein:vir:10 236 LPEGVDFPRGEEDPAGLAGFMAYLQRAAAASMADQSRASAMVPIMATIPNEMMEHLDKIKPLTFWSELSAEITPMKDKAI 315 (646) T ss_pred eccccccCCCCCCCcchhHHHHHHHHHHHhhhcCCCCccceeeeEEeeChHHHhhhhcceeeccCchhhHHHhhhHHHHH Confidence 655432 223344444444433 21 1111 1333322 21 344344432 2233467899999 Q ss_pred HHHHHHhcCCHHHhcccccchh---HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc-------chhhhhhhhcccchhH Q lcl|Aclame:pro 265 AQIAKALRVPSYKLGVNSPNQS---VAQLMEDYVTNDLPFYFDAITSELGLKTLNDK-------DRRLYHIEFDTRSVTG 334 (406) Q Consensus 265 ~~Ia~~fgvpp~~lg~~~~~~n---~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~-------~~~~~~~~~~~~~~~~ 334 (406) +.||..+-|||..|=+.++ +| .-+-...-++ .|.|.+..|++.|++.+|.+. +-..|.++||...+.+ T Consensus 316 ~RlA~glDIppE~LLGlgd-~NHWtAWqI~de~vr-HI~P~l~~ic~AlT~~~Lrp~Le~eGi~dp~kyvvW~DaS~Lt~ 393 (646) T protein:vir:10 316 ARLASSAEIPGEVLTGIGD-ANHWTAWLISDEGIR-WIRGYLGLIADALTRGFLRRALESMGVTNPERYAFAFDTSTLAS 393 (646) T ss_pred HHHHhccCCchhheeeccc-cceeeeeeeccccch-hhhhHHHHHHHHHHhhHHHHHHHHcCCCChhHeEEeecCccccc Confidence 9999999999998732222 22 1122222334 599999999999999887642 2346788898876654 Q ss_pred --HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeee---------ccCc--cchhhc-ccc---cc---ccCccc Q lcl|Aclame:pro 335 --RNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQS---------SLNY--VFLDKK-EEY---QD---KVGIKG 394 (406) Q Consensus 335 --~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~---------~~n~--~~~~~~-~~~---~~---~~~~~~ 394 (406) .+.+++..+++.|.+|-...|+.+|+.--+++.-++..+ +-++ +|.-.. ... +. +..... T Consensus 394 ~pd~~deA~qa~drGAIt~eAlrk~~Gf~~dd~pt~~E~~~~~~~~~v~~~P~Lil~P~~qa~~~~P~~~~~~lpp~~~~ 473 (646) T protein:vir:10 394 KPNRLDEAIQLHERNLIKDEEVVKAGAFSVDQMPTVQERAVQILLGLVKTQPDLILDPAIQAALGLPAVQSVGLPPTAAQ 473 (646) T ss_pred CCCCcHHHHHHHHcCCccHHHHHHHhcccccccCChHHHHHHHHHHHhcCCccccccchhhccccCCCcCccccCCcccc Confidence 367788889999999999999999998654442211110 0011 111100 000 00 000011 Q ss_pred CCC---------------ccCCCCCCC Q lcl|Aclame:pro 395 KGG---------------EVNAEEDKS 406 (406) Q Consensus 395 ~gg---------------~~~~~~~~~ 406 (406) +++ |..++.|.+ T Consensus 474 ~~dg~~~~~e~~g~~~~~E~~~~pda~ 500 (646) T protein:vir:10 474 RTDGDLDDDESEGAPNGGEAPDQPDAD 500 (646) T ss_pred cccCCCCChhhcCCCCCCccCCCCCCC Confidence 111 111111111 No 141 >protein:vir:102426 Length: 631 # NCBI annotation: gp11 # Family: family:all:2798 # MgeID: mge:1618 # MgeName: Pipefish # Cross-refs: genbank:acc:YP_655288;genbank:gi:109521851;genbank:GeneID:4157741 Probab=99.32 E-value=3.9e-13 Score=88.64 Aligned_cols=400 Identities=14% Similarity=0.110 Sum_probs=217.2 Q ss_pred Ccc--c-ccccCCCCcchh------------hHHHhhcCCcccccchhhh---h-ccHHHHHHHHHHHHhhccceeEEEe Q lcl|Aclame:pro 1 MSF--F-QPLGTSKVSYDD------------YISSVLAGDVSQKYLGVSA---L-KNSDILTATSIIAGDIARFPLVKKD 61 (406) Q Consensus 1 M~~--f-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~a---~-~~~~v~~~i~~ia~~ia~~~~~~~~ 61 (406) -++ - ++|++.+.+... ......++.+...-.-..| + .++.+...+..|++.+|+|.+..-. T Consensus 5 ~~lr~~rrpkg~~~a~~r~L~aAs~~~~dpg~~~~~~~g~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~rL~as~ 84 (631) T protein:vir:10 5 QSLRLVRRPKGGRPAPSRALTAASQPLPDPSQVFSKSTGISRNSDWQTDAWEAVDLVGELRYYVGWRASSCSRCRLVASE 84 (631) T ss_pred cceeeeecCCCCCccchhhhhhhhccccchhhhhhhhcCCcccchhhHHHHHHHHhhhhHHHHhhhhhhhhceeeeEeee Confidence 332 2 344443221110 0111111111111111111 1 2466677789999999999998765 Q ss_pred cC-------Cccccc----chHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC---c------eeE-EEe Q lcl|Aclame:pro 62 VN-------GDIIHD----EDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKT---N------QAL-QFQ 120 (406) Q Consensus 62 ~~-------~~~~~~----~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~---g------~~~-~l~ 120 (406) .+ +..... ..+.++...=+-..+...++++.++.++.+-|++|+.+...... + +++ +++ T Consensus 85 idpDtg~ptg~iee~~~~~~~v~~~~~~i~gG~lgQ~~llkrl~~~ltV~GE~wiv~l~~p~~~~~~~pd~~~r~~~~W~ 164 (631) T protein:vir:10 85 LDENTGLPTGGISEDNTEGERVREIVSKIADGTLGQAALTKRVVECLTVPGELWIVILTRPVKGAPAQPDGSVRTRQEWY 164 (631) T ss_pred eccCCCCCccccccCCchhHHHHHHHHhcCCCcchHHHHHHHHHhheecccceEEEEEeccCcCCCCCccccccccccee Confidence 43 222111 23334444446667888999999999999999999887542221 1 122 233 Q ss_pred ecCCeeEEEEEccCcceEEEEEeecCCeEEEEcc-eeeEeec---cCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 121 FYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFA-HDVIHWK---FFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFK 196 (406) Q Consensus 121 ~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~-~~vih~r---~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 196 (406) ++....+......+|.. +... .|....|-. .+ +.|| .++.....--||+.+++..+.-.....+...+..+ T Consensus 165 ~vt~~ei~~~~~g~g~~-v~lp---~g~~h~~~~~~D-~l~RiW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i~aaak 239 (631) T protein:vir:10 165 AVSKEEIKKSNKGSGTN-IVLP---TGEEHEFVKGTD-IIFRVWIPKPRKASEPDSPVRAVLDSIREIVRTTKTIANASK 239 (631) T ss_pred eccHHHHhcccCcccce-eecC---CCCccceecCCc-eEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHHH Confidence 44444443322222221 1111 233333332 23 3333 33445567889999999999988888888888877 Q ss_pred cCCCcceEEeecCCCC---------------------HHHHHHHHHHHHHH----hcc--cccC-ceeecc------CCc Q lcl|Aclame:pro 197 DGFSSGILTMKGAQLS---------------------GDARQRARQEFEKM----REG--SVGG-SPLVFD------STM 242 (406) Q Consensus 197 ng~~~~~~~~~~~~~~---------------------~e~~~~~~~~~~~~----~~g--~~~~-~~~vl~------~g~ 242 (406) ......+++..+..++ .-....+.+.+-+. +.. +.+- -++++. +++ T Consensus 240 SRl~gnGvlflP~els~P~~~~~~~~~~g~~v~~~~g~pa~~~l~~~l~q~a~tai~De~S~aA~vPii~~~p~E~i~~i 319 (631) T protein:vir:10 240 SRLIGNGVLFVPHEMSLPAAQGPVSEVEGEEIAPLVGEPAVQQLTDMLFQVAETAVEDEDSQAAFIPVIAGVPGEQIKDV 319 (631) T ss_pred HHHhhCceeEeccccccCCCCCCCCCcCCccCCccccchhHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHHhcCe Confidence 7777777776554432 11444454444422 211 1111 133332 233 Q ss_pred eeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchh---HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc- Q lcl|Aclame:pro 243 EYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQS---VAQLMEDYVTNDLPFYFDAITSELGLKTLNDK- 318 (406) Q Consensus 243 ~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n---~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~- 318 (406) +.-.+.....+. -+.+++..++.||..+-|||..|=+.+..+| .-+-...-++-.|.|.+..|+++|++.+|.+. T Consensus 320 ~hlkf~~ei~e~-aiktR~daI~RlA~glDi~pE~LLGlGsd~NHWsAWqI~dedVrlHI~P~l~lic~AlT~q~Lrp~L 398 (631) T protein:vir:10 320 KHIRFDNEITEV-AIKTRNDAIARLAMGLDVSPERLLGLGSQTNHWSAWQISDEDVQLHIAPVMEIFCQALTDQILRVTL 398 (631) T ss_pred eEEeecCchhHH-HHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchHHHHHHHHHHhhHHHHHH Confidence 333333333333 4678999999999999999998733222222 22233344566799999999999999887642 Q ss_pred -----chhhhhhhhcccchhH--HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC-----CCee------eec----cC Q lcl|Aclame:pro 319 -----DRRLYHIEFDTRSVTG--RNVDEIVKLVNNQILTPNQGLVELGKQKSTDPN-----MDRY------QSS----LN 376 (406) Q Consensus 319 -----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~-----gd~~------~~~----~n 376 (406) +-..|.++||...+.+ .+.+++..+++.|.||-...|+.+|+.--++.. |-.. ... -+ T Consensus 399 e~eGvDp~kYvvW~DaS~Lt~dPdr~deA~qa~drGAIt~eAlrk~lGf~eDd~yd~~t~e~~~~~a~~av~~dpaLip~ 478 (631) T protein:vir:10 399 AREGIDPSKYVVWYDPSQLTIDPDKSDEAKFAYENGAINGEALRKYLGLGDDAGYDFTTREGWVMWAQDAVSKDPTLIPM 478 (631) T ss_pred HHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCCcCHHHHHHHhcCchhcccCcCchHHHHHHHHHHhhcccCcchh Confidence 2345788898876654 367788889999999999999999998643322 1000 000 11 Q ss_pred ccchhh--cccc-ccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 377 YVFLDK--KEEY-QDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 377 ~~~~~~--~~~~-~~~~~~~~~gg~~~~~~~~~ 406 (406) +.|+-. .... ....+.+..+|+++.+++.. T Consensus 479 lApl~~~~~~~v~~P~~~a~~~~g~ed~~~~~~ 511 (631) T protein:vir:10 479 LAPLIAGVLKQIEFPQQQAIDSGGNEDTSDADD 511 (631) T ss_pred hHHHHHHHhhhccCCCCCCCCCCCCCccccccc Confidence 222111 0110 01112222233333332222 No 142 >protein:vir:8654 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:156 # MgeName: Rosebush # Cross-refs: genbank:acc:NP_817773;genbank:gi:29566205;genbank:GeneID:1259465 Probab=99.25 E-value=1.9e-12 Score=84.80 Aligned_cols=398 Identities=14% Similarity=0.117 Sum_probs=207.6 Q ss_pred Cccc------ccccCCCCcchhhHHHhhcC--Ccccc------cchhh-----h---h-ccHHHHHHHHHHHHhhcccee Q lcl|Aclame:pro 1 MSFF------QPLGTSKVSYDDYISSVLAG--DVSQK------YLGVS-----A---L-KNSDILTATSIIAGDIARFPL 57 (406) Q Consensus 1 M~~f------~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~-----a---~-~~~~v~~~i~~ia~~ia~~~~ 57 (406) |.=- ++|++.+.+....+.....- .+++. ++..+ | + ..+.+...+..|++.+|++.+ T Consensus 1 ma~~~lr~~rrpk~~p~~~r~~al~aas~~i~~p~~~~~ks~~~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~Sr~rL 80 (629) T protein:vir:86 1 MAPTSLRIVRRPKSEPVSTRQRALVAASQPVENPGKAFRKAMGSSTRTDWQEDAWKAYDAVGELRYYVGWRSSSASRVRL 80 (629) T ss_pred CCccceeeeecCCCCChhhhhhhhhhhhhccccccchhhhhcCCCchhhhhHHHHHHHHhhhhHHHHhhhhhhhhceeee Confidence 5421 23332222111111100000 00000 11111 1 1 255667778999999999999 Q ss_pred EEEecC--C-----cccccc----hHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC-----ceeEEE-e Q lcl|Aclame:pro 58 VKKDVN--G-----DIIHDE----DINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKT-----NQALQF-Q 120 (406) Q Consensus 58 ~~~~~~--~-----~~~~~~----~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~-----g~~~~l-~ 120 (406) ..-..+ + ....++ .+.++...=-.-.+...++++.+..++.+-|++|+.+.....+ +.++.. + T Consensus 81 ~as~idpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~~~eW~ 160 (629) T protein:vir:86 81 IASAIDPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNPVPEWL 160 (629) T ss_pred EeeeecCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcchhhhe Confidence 876543 1 111121 2233333222234555799999999999999999988754222 222222 2 Q ss_pred ecCCeeEEEEEccCcceEEEEEeecCCeEEEE-cceeeEeec---cCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 121 FYRPSETTVEETDNHEIVYTFTDMLTAKQVKC-FAHDVIHWK---FFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFK 196 (406) Q Consensus 121 ~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~-~~~~vih~r---~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 196 (406) .+.++.+.- . .+.. ......|....| +..+++ || .++.....--||+.+++..+.-.....+...+..+ T Consensus 161 ~vt~~ei~~--~-~~~~---~i~lP~g~~~e~~~~~d~l-~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~lt~~i~aaak 233 (629) T protein:vir:86 161 ALTPEEVRA--S-EKKT---IIELPTGDKHEFRDGLDGM-FRVWNPRARRAREPDSPVRANLDSLKEIVRTTKTIANASK 233 (629) T ss_pred eechHHhhh--c-cCce---eeEcCCCCcceeeCCCceE-EEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHHH Confidence 333333331 1 1222 122223333333 344444 55 23445567889999999999988888888777777 Q ss_pred cCCCcceEEeecCCCC----------------------HHHHHHHHHHHHHH----hcc--cccC-ceeecc------CC Q lcl|Aclame:pro 197 DGFSSGILTMKGAQLS----------------------GDARQRARQEFEKM----REG--SVGG-SPLVFD------ST 241 (406) Q Consensus 197 ng~~~~~~~~~~~~~~----------------------~e~~~~~~~~~~~~----~~g--~~~~-~~~vl~------~g 241 (406) ......+++..+..++ .-..+.+.+.|.+. +.. +.+- -++++. ++ T Consensus 234 SRL~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia~~P~E~i~~ 313 (629) T protein:vir:86 234 SRLIGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFAAAPGELIKN 313 (629) T ss_pred HHHhhCceeeeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHHhcC Confidence 6666666654433211 11344455555532 222 1111 133332 23 Q ss_pred ceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchh---HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc Q lcl|Aclame:pro 242 MEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQS---VAQLMEDYVTNDLPFYFDAITSELGLKTLNDK 318 (406) Q Consensus 242 ~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n---~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~ 318 (406) ++.-.+.....+. -+.+++..++.||..+-|||..|=+.+..+| .-+-...-++-.|.|.+..|+++|++.+|.+. T Consensus 314 i~hlkf~~ei~e~-aiktR~daI~RlA~glDippE~LLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~AlT~~~Lrp~ 392 (629) T protein:vir:86 314 VTHLKFDNQVTEV-AIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVRLHILPPVEMLCEAITNQVLRTV 392 (629) T ss_pred eeEEeecCchhHH-HHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchHHHHHHHHHHhhHHHHH Confidence 3333333333333 4678999999999999999998732222222 22233344566899999999999999887642 Q ss_pred ------chhhhhhhhcccchhH--HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC-----C------CeeeeccCc-- Q lcl|Aclame:pro 319 ------DRRLYHIEFDTRSVTG--RNVDEIVKLVNNQILTPNQGLVELGKQKSTDPN-----M------DRYQSSLNY-- 377 (406) Q Consensus 319 ------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~-----g------d~~~~~~n~-- 377 (406) +-..|.++||...+.+ .+.+++..+++.|.+|-...|+.+|+.--++.+ | +.+...-++ T Consensus 393 Le~eGiDp~kYvvW~DaS~Lt~dPd~~deA~~a~drGAIt~eAlrk~lGf~eD~~yd~tt~E~~~~~a~d~V~~~P~Li~ 472 (629) T protein:vir:86 393 LMREGIDPNAYVVWHDASQLTVDPDKTDEARDAFDRGAITAEAMVKMLGLADDTVYDFTTPEGWAQWARDRVGQDPNLLP 472 (629) T ss_pred HHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCCcCHHHHHHHhcCccccccCCCchHHHHHHHHHhhhhCcchhh Confidence 2345788888876654 367788889999999999999999998633321 1 111111111 Q ss_pred --cch----hhccc----cccccCc-----ccCCCccCCCCCCC Q lcl|Aclame:pro 378 --VFL----DKKEE----YQDKVGI-----KGKGGEVNAEEDKS 406 (406) Q Consensus 378 --~~~----~~~~~----~~~~~~~-----~~~gg~~~~~~~~~ 406 (406) +++ ..... .+.+..+ ...+|..++++.+. T Consensus 473 ~~a~l~~~~a~~~~P~~~~~~pp~~e~~~~dE~sga~~~~ep~t 516 (629) T protein:vir:86 473 TLAVLIPELADVEFPTPTVALPPAEEQDGDEEASGASRREEPDT 516 (629) T ss_pred hhhhhhhhhcccccCccCCCCCccccCCCcccccCCCcCCCCCC Confidence 111 00000 0000011 11111111111111 No 143 >protein:vir:99088 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:1608 # MgeName: Qyrzula # Cross-refs: genbank:acc:YP_655692;genbank:gi:109521770;genbank:GeneID:4157810 Probab=99.23 E-value=2.5e-12 Score=84.19 Aligned_cols=397 Identities=14% Similarity=0.131 Sum_probs=207.1 Q ss_pred Cccc------ccccCCCCcchhhHHHhhcC--Ccccc------cchhh-----h---h-ccHHHHHHHHHHHHhhcccee Q lcl|Aclame:pro 1 MSFF------QPLGTSKVSYDDYISSVLAG--DVSQK------YLGVS-----A---L-KNSDILTATSIIAGDIARFPL 57 (406) Q Consensus 1 M~~f------~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~-----a---~-~~~~v~~~i~~ia~~ia~~~~ 57 (406) |.=- ++|++.+.+....+.....- .+++. ++..+ | + ..+.+...+..|++.+|++.+ T Consensus 1 ma~~~lr~~rrpk~~p~~~r~~al~aas~~i~~p~~~~~ks~~~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~Sr~rL 80 (629) T protein:vir:99 1 MAPTSLRIVRRPKSEPVSTRQRALVAASQPVENPGKAFRKAMGSSTRTDWQDDAWKAYDAVGELRYYVGWRSSSASRVRL 80 (629) T ss_pred CCccceeeeecCCCCChhhhhhhhhhhhhcccccchhhhhhcCCCchhhhhHHHHHHHHhhhhHHHHhhhhhhhhceeee Confidence 5421 23332221111111100000 00000 11111 1 1 255667778899999999999 Q ss_pred EEEecC--C-----cccccc----hHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC-----ceeEEE-e Q lcl|Aclame:pro 58 VKKDVN--G-----DIIHDE----DINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKT-----NQALQF-Q 120 (406) Q Consensus 58 ~~~~~~--~-----~~~~~~----~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~-----g~~~~l-~ 120 (406) ..-..+ + ....+. .+.++...=-.-.+...++++.+..++.+-|++|+.+.....+ +.++.. + T Consensus 81 ~as~idpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~~~eW~ 160 (629) T protein:vir:99 81 IASAIDPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNPVPEWL 160 (629) T ss_pred EeeeecCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcchhhhe Confidence 876543 1 111121 2233333222234555799999999999999999988754222 222222 2 Q ss_pred ecCCeeEEEEEccCcceEEEEEeecCCeEEE-EcceeeEeec---cCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 121 FYRPSETTVEETDNHEIVYTFTDMLTAKQVK-CFAHDVIHWK---FFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFK 196 (406) Q Consensus 121 ~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~-~~~~~vih~r---~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 196 (406) .+.++.+.- . .+... .....|.... .+..+++ || .++.....--||+.+++..+.-.....+...+..+ T Consensus 161 ~vt~~ei~~--~-~~~~~---i~lP~g~~~e~~~~~d~l-~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~lt~~i~aaak 233 (629) T protein:vir:99 161 ALTPEEVRA--S-EKKTI---IELPTGDKHEFRDGLDGM-FRVWNPRARRAREPDSPVRANLDSLKEIVRTTKTIANASK 233 (629) T ss_pred eechHHhhh--c-cCcee---EEcCCCCccceeCCCceE-EEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHHH Confidence 333333331 1 12221 2222233333 3344444 55 23445567889999999999988888888777777 Q ss_pred cCCCcceEEeecCCCC----------------------HHHHHHHHHHHHHH----hcc--cccC-ceeecc------CC Q lcl|Aclame:pro 197 DGFSSGILTMKGAQLS----------------------GDARQRARQEFEKM----REG--SVGG-SPLVFD------ST 241 (406) Q Consensus 197 ng~~~~~~~~~~~~~~----------------------~e~~~~~~~~~~~~----~~g--~~~~-~~~vl~------~g 241 (406) ......+++..+..++ .-..+.+.+.|.+. +.. +.+- -++++. ++ T Consensus 234 SRL~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia~~P~E~i~~ 313 (629) T protein:vir:99 234 SRLIGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFAAAPGELIKN 313 (629) T ss_pred HHHhhCceeEeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHHhcC Confidence 6666666654433211 11344455555532 222 1111 133332 23 Q ss_pred ceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchh---HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc Q lcl|Aclame:pro 242 MEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQS---VAQLMEDYVTNDLPFYFDAITSELGLKTLNDK 318 (406) Q Consensus 242 ~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n---~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~ 318 (406) ++.-.+.....+. -+.+++..++.||..+-|||..|=+.+..+| .-+-...-++-.|.|.+..|+++|++.+|.+. T Consensus 314 i~hlkf~~ei~e~-aiktR~daI~RlA~glDippE~LLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~AlT~~~Lrp~ 392 (629) T protein:vir:99 314 VTHLKFDNQVTEV-AIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVRLHILPPVEMLCEAITNQVLRTV 392 (629) T ss_pred eeEEeecCchhHH-HHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchhHHHHHHHHHhhHHHHH Confidence 3333333333333 4678999999999999999998732222222 22233344566899999999999999887642 Q ss_pred ------chhhhhhhhcccchhH--HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC-----C------CeeeeccCc-- Q lcl|Aclame:pro 319 ------DRRLYHIEFDTRSVTG--RNVDEIVKLVNNQILTPNQGLVELGKQKSTDPN-----M------DRYQSSLNY-- 377 (406) Q Consensus 319 ------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~-----g------d~~~~~~n~-- 377 (406) +-..|.++||...+.+ .+.+++..+++.|.+|-...|+.+|+.--++.+ | +.+...-++ T Consensus 393 Le~eGiDp~kYvvW~DaS~Lt~dPd~~deA~~a~drGAIt~eAlrk~lGf~eD~~yd~tt~E~~~~~a~d~V~~~P~Li~ 472 (629) T protein:vir:99 393 LMREGIDPNAYVVWHDASQLTVDPDKTDEARDAFDRGAITAEAMVKMLGLADDTVYDFTTPEGWAQWARDRVGQDPNLLP 472 (629) T ss_pred HHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCCccHHHHHHHhcCccccccCCCchHHHHHHHHHhhhhCcchhh Confidence 2345788888876654 367788889999999999999999998633321 1 111111111 Q ss_pred --cch----hhcccccccc-----Cc-----ccCCCccCCCCCCC Q lcl|Aclame:pro 378 --VFL----DKKEEYQDKV-----GI-----KGKGGEVNAEEDKS 406 (406) Q Consensus 378 --~~~----~~~~~~~~~~-----~~-----~~~gg~~~~~~~~~ 406 (406) +++ .... .+.+. .+ ...+|..++++.+. T Consensus 473 ~~a~l~~~~a~~~-~P~~~~~~pp~~e~~~~dE~sga~~~~ep~t 516 (629) T protein:vir:99 473 TLAVLIPELADVE-FPTPTVALPPAEEQDGDEEASGASRREEPDT 516 (629) T ss_pred hhhhhhhhhcccc-cCccCCCCCccccCCCcccccCCCcCCCCCC Confidence 111 0000 00111 11 11111111111111 No 144 >protein:vir:106027 Length: 629 # NCBI annotation: gp9 # Family: family:all:2798 # MgeID: mge:1505 # MgeName: Cooper # Cross-refs: genbank:acc:YP_654906;genbank:gi:109392362;genbank:GeneID:4157055 Probab=99.10 E-value=4.3e-11 Score=77.44 Aligned_cols=399 Identities=13% Similarity=0.106 Sum_probs=210.5 Q ss_pred Cccc------ccccCCC--------Ccch--hhHHHhhcCCcccccchhhh---h-ccHHHHHHHHHHHHhhccceeEEE Q lcl|Aclame:pro 1 MSFF------QPLGTSK--------VSYD--DYISSVLAGDVSQKYLGVSA---L-KNSDILTATSIIAGDIARFPLVKK 60 (406) Q Consensus 1 M~~f------~~~~~~~--------~~~~--~~~~~~~~~~~~~~~~~~~a---~-~~~~v~~~i~~ia~~ia~~~~~~~ 60 (406) |.=- +++.+.. .+.+ ..+.....|.....-.-..| + ..+.++-.+..+++.+|++.+..- T Consensus 1 ma~~~lrv~rrpk~~p~~r~l~aasqp~~P~~~~~~~~~g~~~~~~WQ~eAW~~~d~VgElryyvgW~~ss~Sr~rL~as 80 (629) T protein:vir:10 1 MAASTLRVSRRPKGSPARRSLTAASQPMEPGRTPSRQVAGTVVRTSWQNEAWECMDLVGELRYYVGWRASSCSRVELIAS 80 (629) T ss_pred CCccceeEEecCCCccceeeeccccCCCCcchhhchhhhhhhhhhhhhHHHHHHHHhhhhHHHHhhhhhhhheeeeEEEe Confidence 5421 1222100 0010 00101111110000000111 1 235566678889999999999875 Q ss_pred ecC--C-----cccccchH----HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCce----eEEEee-cCC Q lcl|Aclame:pro 61 DVN--G-----DIIHDEDI----NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQ----ALQFQF-YRP 124 (406) Q Consensus 61 ~~~--~-----~~~~~~~~----~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~----~~~l~~-l~p 124 (406) ..+ + ....+++- ...+..=-.--+...++++.+..++.+-|+.|+.++.. .++. +...|. +.. T Consensus 81 ~idpDtg~ptg~i~ed~p~~~~v~~~v~~iagG~lGqaqLlkr~~~~ltV~GE~~i~il~~-~~~~pd~~~r~~W~vVt~ 159 (629) T protein:vir:10 81 ELDPDTGKPTGGIRDDDPDGLRFLEIVKTMAGGPLGQAQLQKRAAECLTVPGEHRICLLDQ-GDKNPDGSVRHNWYVVTN 159 (629) T ss_pred eecCCCCCCccccccCchhHHHHHHHHHHhcCccchHHHHHHHHHhheeccCceEEEEeec-CCCCCCcccccceeeecH Confidence 433 1 11112221 12233223345667899999999999999999988754 3332 232222 222 Q ss_pred eeEEEEEccCcceEEEEEeecCCeEEEEcceeeEeec-c--CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCc Q lcl|Aclame:pro 125 SETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHWK-F--FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSS 201 (406) Q Consensus 125 ~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~r-~--~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~ 201 (406) +.+. .+..|.. .....+|....|..+.=+.|| . ++.....--||+.+++..+.-.....+...+..+..... T Consensus 160 ~Ei~--~kg~g~~---~i~lpdg~~he~~~~~D~l~RvW~P~Prr~~e~DSpvra~l~~lrEi~r~tk~i~~aakSRL~g 234 (629) T protein:vir:10 160 DEVK--NKGAGKT---DIELPDGTIHEYSKGRDVMFRVWNPRPRRAKEPDSPVRACLDSLREIIRTTKKIRNASKSRLIG 234 (629) T ss_pred HHhc--cccCcee---EEEcCCCceeeeeCCCeeEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHHhHHhh Confidence 3222 1111222 233445666666554434444 2 344456678999999999998888888777777766666 Q ss_pred ceEEeecCCCC----------------------HHHHHHHHHHHHHHh----cc--cccCc-eeecc-CC---ceeeecc Q lcl|Aclame:pro 202 GILTMKGAQLS----------------------GDARQRARQEFEKMR----EG--SVGGS-PLVFD-ST---MEYTPLE 248 (406) Q Consensus 202 ~~~~~~~~~~~----------------------~e~~~~~~~~~~~~~----~g--~~~~~-~~vl~-~g---~~~~~l~ 248 (406) ++++..+..++ ....+.+.+.|.+.- .. +.+-- ++++. .| -+++.|. T Consensus 235 nGvlflP~e~slp~~~ap~~~~~Pg~~~p~~~g~aa~d~l~~~l~q~a~aAi~De~S~aA~vPiia~vP~E~l~~ikhLk 314 (629) T protein:vir:10 235 NGVVFLPQELSLPRATAPVADNQPGAPVPIVDGVAAADELSNLLFQTAAAAVDDEDSQAALIPLLATVPGEHLQKIFHLK 314 (629) T ss_pred CceeEeccCcccccccCCCCCCCCcccccccCCCcchHHHHHHHHHHHHhhhcCCCCccceeeeEEeechHHhcCeeeee Confidence 66654432211 013344444444433 21 11111 33332 11 2444444 Q ss_pred C--ChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchh---HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc----- Q lcl|Aclame:pro 249 I--DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQS---VAQLMEDYVTNDLPFYFDAITSELGLKTLNDK----- 318 (406) Q Consensus 249 ~--~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n---~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~----- 318 (406) . ...+. -+..++..++.+|..+-|||..|=+.+..+| .-+-...-++-.|.|.+..|++++++.+|... T Consensus 315 f~~eite~-~iktR~daI~RlAmglDispErLLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~Ait~~~Lrp~L~~eG 393 (629) T protein:vir:10 315 IGNEITEV-EIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVQLHIKPVMEVLCAAIYREVLVATLRAEG 393 (629) T ss_pred ecCchhHH-HHhhHHHHHHHHHhccCCChhheeeccCCccceeeEEecccceeeecchHHHHHHHHHHhHHHHHHHHHhC Confidence 4 33333 4678999999999999999998733222222 22222344566799999999999999887642 Q ss_pred -chhhhhhhhcccchhH--HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCee-----------eeccCc----cch Q lcl|Aclame:pro 319 -DRRLYHIEFDTRSVTG--RNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRY-----------QSSLNY----VFL 380 (406) Q Consensus 319 -~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~-----------~~~~n~----~~~ 380 (406) +-..|.++||...+.. .+.+++..+.+.|.+|-...|+.+|+..-++..-+.+ ..+-.+ .|+ T Consensus 394 iDp~~Yvvw~DaS~Lt~dPd~~deA~~a~drGaIt~eAlRr~lG~~~dd~y~~~t~~~~q~~A~~~v~~~P~Li~~~apl 473 (629) T protein:vir:10 394 IDPDRYVLWYDASGLTVDPDKTDEATAAKEQGAITHEAYRRYLGLADEDGYDLETLEGAQAWARDAIVADPSLIKVLAPL 473 (629) T ss_pred CCHHHhEeeecCcccccCCCCcHHHHHHHHcCCccHHHHHHHhccccccCCCcCCcHHHHHHHHHHhcCCCchhhhhhhh Confidence 2345788888876654 3677788889999999999999999986544221111 011111 111 Q ss_pred hhc----cccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 381 DKK----EEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 381 ~~~----~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) ... .....+......++++++++++. T Consensus 474 l~~~l~~i~~P~p~~a~~~~~~~~~~~E~~ 503 (629) T protein:vir:10 474 LTDELAEIDWPEPPAALPPGEDDQADEEQD 503 (629) T ss_pred cCCccccccccCCCCcCCCCCcccCccccC Confidence 100 01112222223333333333333 No 145 >protein:vir:107517 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1481 # MgeName: PG1 # Cross-refs: genbank:acc:NP_943786;genbank:gi:38638411;genbank:GeneID:2657197 Probab=99.06 E-value=1.1e-10 Score=75.10 Aligned_cols=398 Identities=12% Similarity=0.076 Sum_probs=211.5 Q ss_pred Cccc------ccccCCCCcchhhHH--------------HhhcCCcccccchhhh---h-ccHHHHHHHHHHHHhhccce Q lcl|Aclame:pro 1 MSFF------QPLGTSKVSYDDYIS--------------SVLAGDVSQKYLGVSA---L-KNSDILTATSIIAGDIARFP 56 (406) Q Consensus 1 M~~f------~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~a---~-~~~~v~~~i~~ia~~ia~~~ 56 (406) |.=- ++|++.+.+....+. ..+.++ ...-.-..| + .++.+.-.+..|++.+|+|. T Consensus 1 ma~~~lr~~rrpk~~p~~~rr~~ltaAsq~~~~p~~~~kt~~~~~-ar~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~r 79 (639) T protein:vir:10 1 MAATSLRVVRRPKGSAPAARRRSLTAASQLITDPQKQMKTSLMGT-ARNEWQSEAWDFSESIGELSYYVSWRANSCSRTT 79 (639) T ss_pred CCccceeeeecCCCCCcchhhHHHhhhhhccCCcccchhhhcccc-chhhhhhhhhhhhhhhhhHHHHhhhhhhhhceee Confidence 5421 334433322221111 111111 000000111 1 23566777899999999999 Q ss_pred eEEEecC--Cc-----c--cc---cchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc------eeEE Q lcl|Aclame:pro 57 LVKKDVN--GD-----I--IH---DEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN------QALQ 118 (406) Q Consensus 57 ~~~~~~~--~~-----~--~~---~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g------~~~~ 118 (406) +..-..+ .. . .. .+.+....+.=-.--+...++++.+..++.+-|++|+.++.....+ .+.+ T Consensus 80 L~as~idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~~~~~~~~~~~ 159 (639) T protein:vir:10 80 LIPSAIDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKDPVTGLAAPRA 159 (639) T ss_pred eEeeeeccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCccccCccccccc Confidence 9876433 11 1 11 1223333332233446668999999999999999997765532222 2344 Q ss_pred Eeec-CCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeEeec---cCCCCCccccCHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 119 FQFY-RPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHWK---FFSHDTILGRSPLLSLGDEIDLQTGGINTLIKF 194 (406) Q Consensus 119 l~~l-~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~r---~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~ 194 (406) .|.+ ..+.+.. ...|..- ....+|...+|..+.=+.|| .++.....--||+.+++..+.-.....+...+. T Consensus 160 ~W~vvs~~Ei~~--~~~~~~~---i~lPdG~~he~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i~aa 234 (639) T protein:vir:10 160 RWYAVTREEIKS--KAGETAE---ISLPDGKTHEFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIERTTRKIKNA 234 (639) T ss_pred ceeeeeHHHhcc--cCCCeeE---eecCCCCCccccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHH Confidence 4433 2333331 1112111 11224544455443323344 234455678899999999999888888888877 Q ss_pred HhcCCCcceEEeecCCCCH-------------------------HHHHHHHHHHHHHh----cc--cccC-ceeeccC-- Q lcl|Aclame:pro 195 FKDGFSSGILTMKGAQLSG-------------------------DARQRARQEFEKMR----EG--SVGG-SPLVFDS-- 240 (406) Q Consensus 195 ~~ng~~~~~~~~~~~~~~~-------------------------e~~~~~~~~~~~~~----~g--~~~~-~~~vl~~-- 240 (406) .+.....++++..+..++- ...+.+.+.|.+.. .. +.+- -++++.. T Consensus 235 akSRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~vPiia~~p~ 314 (639) T protein:vir:10 235 AKSRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYIPLVASVAA 314 (639) T ss_pred HHHHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCccceeeeeEeech Confidence 7776666666655443221 11334444444433 21 1111 1333321 Q ss_pred --CceeeeccCCh-hHHHHHHHHHHHHHHHHHHhcCCHHHh-cccccchh---HHHHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 241 --TMEYTPLEIDT-NVLQLITSNNFSTAQIAKALRVPSYKL-GVNSPNQS---VAQLMEDYVTNDLPFYFDAITSELGLK 313 (406) Q Consensus 241 --g~~~~~l~~~~-~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g~~~~~~n---~~~~~~~~~~~~i~P~~~~ie~~l~~~ 313 (406) .-+++.|.... -+.--+.+++..++.||..+-|||..| |. ++ +| .-+-...-++-.|.|.+..|+++|++. T Consensus 315 E~l~~ikhl~f~~ei~e~aiktR~daI~RlA~glDi~pE~LLGl-~d-~NHWsAWqI~dedvrlHI~P~l~~icdAlT~~ 392 (639) T protein:vir:10 315 EHLEKVQHIKFGNEVTEVEIKTRIDAITRLAMGLDVSPERLLGM-SK-GNHWSAWAIGDEDVQLHIKPVMDLICQAIYND 392 (639) T ss_pred HHhcCeeeeeecCchhHHHHhhHHHHHHHHHhccCCchhheeec-cc-ccceEEEEecccceeeecchhHHHHHHHHHhh Confidence 12444444432 223346789999999999999999987 44 32 22 222233445678999999999999998 Q ss_pred ccCcc------chhhhhhhhcccchhH--HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCC-----------eeeec Q lcl|Aclame:pro 314 TLNDK------DRRLYHIEFDTRSVTG--RNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMD-----------RYQSS 374 (406) Q Consensus 314 l~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd-----------~~~~~ 374 (406) +|.+. +-..|.++||...+.+ .+.+++..+++.|.+|-.-.|+.+|+..-++..-+ .+..+ T Consensus 393 ~Lrp~Le~eGvDp~kYvvW~DaS~Lt~dPd~~deA~qa~drGAIt~eAlR~~lG~~edd~yd~~t~e~~~~~A~~~V~~~ 472 (639) T protein:vir:10 393 ILTPLLAREGIDPTKYILWYDASGLTSDPDLSDEAVEAHDRGAITSAALRRLLNVGEDSGYDLTTLDGCREFAADVVTKN 472 (639) T ss_pred HHHHHHHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCCccHHHHHHHhccccccCCCCCCcHHHHHHHHHHhcCC Confidence 87642 2345788898876654 36778888999999999999999999764322210 01111 Q ss_pred cCc----cchhhc----cccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 375 LNY----VFLDKK----EEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 375 ~n~----~~~~~~----~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) -++ +|+... .+...+.....+++++.+.++++ T Consensus 473 P~li~~~apl~~P~lq~~e~ptp~~a~~~a~~~~~~de~~ 512 (639) T protein:vir:10 473 PELIAMYAPLLSSQLAGIEFPQPANAIESTREDEEDDEDS 512 (639) T ss_pred cchhhhhhhccCccceecccCCCCCCCCCCCCCCCccccc Confidence 111 111100 11111211122222221111111 No 146 >protein:vir:97900 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1482 # MgeName: Orion # Cross-refs: genbank:acc:YP_655104;genbank:gi:109391854;genbank:GeneID:4157263 Probab=99.06 E-value=1.1e-10 Score=75.10 Aligned_cols=398 Identities=12% Similarity=0.076 Sum_probs=211.5 Q ss_pred Cccc------ccccCCCCcchhhHH--------------HhhcCCcccccchhhh---h-ccHHHHHHHHHHHHhhccce Q lcl|Aclame:pro 1 MSFF------QPLGTSKVSYDDYIS--------------SVLAGDVSQKYLGVSA---L-KNSDILTATSIIAGDIARFP 56 (406) Q Consensus 1 M~~f------~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~a---~-~~~~v~~~i~~ia~~ia~~~ 56 (406) |.=- ++|++.+.+....+. ..+.++ ...-.-..| + .++.+.-.+..|++.+|+|. T Consensus 1 ma~~~lr~~rrpk~~p~~~rr~~ltaAsq~~~~p~~~~kt~~~~~-ar~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~r 79 (639) T protein:vir:97 1 MAATSLRVVRRPKGSAPAARRRSLTAASQLITDPQKQMKTSLMGT-ARNEWQSEAWDFSESIGELSYYVSWRANSCSRTT 79 (639) T ss_pred CCccceeeeecCCCCCcchhhHHHhhhhhccCCcccchhhhcccc-chhhhhhhhhhhhhhhhhHHHHhhhhhhhhceee Confidence 5421 334433322221111 111111 000000111 1 23566777899999999999 Q ss_pred eEEEecC--Cc-----c--cc---cchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc------eeEE Q lcl|Aclame:pro 57 LVKKDVN--GD-----I--IH---DEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN------QALQ 118 (406) Q Consensus 57 ~~~~~~~--~~-----~--~~---~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g------~~~~ 118 (406) +..-..+ .. . .. .+.+....+.=-.--+...++++.+..++.+-|++|+.++.....+ .+.+ T Consensus 80 L~as~idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~~~~~~~~~~~ 159 (639) T protein:vir:97 80 LIPSAIDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKDPVTGLAAPRA 159 (639) T ss_pred eEeeeeccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCccccCccccccc Confidence 9876433 11 1 11 1223333332233446668999999999999999997765532222 2344 Q ss_pred Eeec-CCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeEeec---cCCCCCccccCHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 119 FQFY-RPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHWK---FFSHDTILGRSPLLSLGDEIDLQTGGINTLIKF 194 (406) Q Consensus 119 l~~l-~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~r---~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~ 194 (406) .|.+ ..+.+.. ...|..- ....+|...+|..+.=+.|| .++.....--||+.+++..+.-.....+...+. T Consensus 160 ~W~vvs~~Ei~~--~~~~~~~---i~lPdG~~he~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i~aa 234 (639) T protein:vir:97 160 RWYAVTREEIKS--KAGETAE---ISLPDGKTHEFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIERTTRKIKNA 234 (639) T ss_pred ceeeeeHHHhcc--cCCCeeE---eecCCCCCccccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHH Confidence 4433 2333331 1112111 11224544455443323344 234455678899999999999888888888877 Q ss_pred HhcCCCcceEEeecCCCCH-------------------------HHHHHHHHHHHHHh----cc--cccC-ceeeccC-- Q lcl|Aclame:pro 195 FKDGFSSGILTMKGAQLSG-------------------------DARQRARQEFEKMR----EG--SVGG-SPLVFDS-- 240 (406) Q Consensus 195 ~~ng~~~~~~~~~~~~~~~-------------------------e~~~~~~~~~~~~~----~g--~~~~-~~~vl~~-- 240 (406) .+.....++++..+..++- ...+.+.+.|.+.. .. +.+- -++++.. T Consensus 235 akSRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~vPiia~~p~ 314 (639) T protein:vir:97 235 AKSRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYIPLVASVAA 314 (639) T ss_pred HHHHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCccceeeeeEeech Confidence 7776666666655443221 11334444444433 21 1111 1333321 Q ss_pred --CceeeeccCCh-hHHHHHHHHHHHHHHHHHHhcCCHHHh-cccccchh---HHHHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 241 --TMEYTPLEIDT-NVLQLITSNNFSTAQIAKALRVPSYKL-GVNSPNQS---VAQLMEDYVTNDLPFYFDAITSELGLK 313 (406) Q Consensus 241 --g~~~~~l~~~~-~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g~~~~~~n---~~~~~~~~~~~~i~P~~~~ie~~l~~~ 313 (406) .-+++.|.... -+.--+.+++..++.||..+-|||..| |. ++ +| .-+-...-++-.|.|.+..|+++|++. T Consensus 315 E~l~~ikhl~f~~ei~e~aiktR~daI~RlA~glDi~pE~LLGl-~d-~NHWsAWqI~dedvrlHI~P~l~~icdAlT~~ 392 (639) T protein:vir:97 315 EHLEKVQHIKFGNEVTEVEIKTRIDAITRLAMGLDVSPERLLGM-SK-GNHWSAWAIGDEDVQLHIKPVMDLICQAIYND 392 (639) T ss_pred HHhcCeeeeeecCchhHHHHhhHHHHHHHHHhccCCchhheeec-cc-ccceEEEEecccceeeecchhHHHHHHHHHhh Confidence 12444444432 223346789999999999999999987 44 32 22 222233445678999999999999998 Q ss_pred ccCcc------chhhhhhhhcccchhH--HHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCC-----------eeeec Q lcl|Aclame:pro 314 TLNDK------DRRLYHIEFDTRSVTG--RNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMD-----------RYQSS 374 (406) Q Consensus 314 l~~~~------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd-----------~~~~~ 374 (406) +|.+. +-..|.++||...+.+ .+.+++..+++.|.+|-.-.|+.+|+..-++..-+ .+..+ T Consensus 393 ~Lrp~Le~eGvDp~kYvvW~DaS~Lt~dPd~~deA~qa~drGAIt~eAlR~~lG~~edd~yd~~t~e~~~~~A~~~V~~~ 472 (639) T protein:vir:97 393 ILTPLLAREGIDPTKYILWYDASGLTSDPDLSDEAVEAHDRGAITSAALRRLLNVGEDSGYDLTTLDGCREFAADVVTKN 472 (639) T ss_pred HHHHHHHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCCccHHHHHHHhccccccCCCCCCcHHHHHHHHHHhcCC Confidence 87642 2345788898876654 36778888999999999999999999764322210 01111 Q ss_pred cCc----cchhhc----cccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 375 LNY----VFLDKK----EEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 375 ~n~----~~~~~~----~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) -++ +|+... .+...+.....+++++.+.++++ T Consensus 473 P~li~~~apl~~P~lq~~e~ptp~~a~~~a~~~~~~de~~ 512 (639) T protein:vir:97 473 PELIAMYAPLLSSQLAGIEFPQPANAIESTREDEEDDEDS 512 (639) T ss_pred cchhhhhhhccCccceecccCCCCCCCCCCCCCCCccccc Confidence 111 111100 11111211122222221111111 No 147 >protein:vir:98444 Length: 434 # NCBI annotation: hypothetical protein # Family: family:all:5096 # MgeID: mge:1589 # MgeName: VWB # Cross-refs: genbank:acc:NP_958276;genbank:gi:41057250;genbank:GeneID:2732828 Probab=98.73 E-value=4e-08 Score=61.13 Aligned_cols=365 Identities=9% Similarity=0.008 Sum_probs=160.3 Q ss_pred hhcCCcccccchhhh-hccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHh Q lcl|Aclame:pro 21 VLAGDVSQKYLGVSA-LKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAIL 99 (406) Q Consensus 21 ~~~~~~~~~~~~~~a-~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l 99 (406) .+.......+....- ....-..-+|+.+++.+---.|.. .+.+ ....+..++. -| ........+..+.++ T Consensus 1 ~l~~~~~~~~~~~~~~~v~n~~~~ivd~~~~~l~~~gf~~--~d~~--~~~~~~~i~~--~N---~~d~~~~~~~~~a~i 71 (434) T protein:vir:98 1 MLPKNAEQAFLDFQRKARTNFCGLIANASVHRLLALGVTG--PDGE--PDTRASRWWQ--AN---RLDSRQKLVWRMAMA 71 (434) T ss_pred CCCCCccHHHHHhhhhhhccchHHHHHHHHhhhccCceec--CCCc--hHHHHHHHHH--hc---ChhHHHHHHHHHHhh Confidence 111100000000000 000112334454444332112221 1221 2233444442 23 334566778889999 Q ss_pred cCCceEEEEecCC----Ccee-EEEeecCCeeEEEEEccCc-ceEEE---EEeecCCeEE--E----------------- Q lcl|Aclame:pro 100 TGNSFSRILRDPK----TNQA-LQFQFYRPSETTVEETDNH-EIVYT---FTDMLTAKQV--K----------------- 151 (406) Q Consensus 100 ~G~~~~~i~~~~~----~g~~-~~l~~l~p~~~~~~~~~~g-~~~~~---~~~~~~g~~~--~----------------- 151 (406) +|.+|.++.++.. ++.+ ..+..++|..+.+.++... ++.+. +....++... . T Consensus 72 ~G~ay~~v~~~~~~~~~~~~~~~~I~~~~p~~~~~i~D~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (434) T protein:vir:98 72 QSAGYMLVGAHPTRTEDNGRPSPLITMEHPSECIVEYDPETGEPLVGLKVWHNDIDGFGYARVFFDDTSFPYRTRERTGA 151 (434) T ss_pred cCceEEEEecCCCcccccCCceeEEEEeccceeEEEEeCCCCceEEEEEEEEeccCCceEEEEEEeCcEEEEEEeecccc Confidence 9999998876532 1222 2366788888887776432 21111 1111111100 0 Q ss_pred ----------------------EcceeeEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecC Q lcl|Aclame:pro 152 ----------------------CFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGA 209 (406) Q Consensus 152 ----------------------~~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~ 209 (406) +..=.|+||++++.-...|.|-++.+...++..+..........+-.+.|..++... T Consensus 152 ~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~N~~~~~~~g~sd~e~vi~liDa~~~~~s~~~~~~~~~a~p~~~i~G~- 230 (434) T protein:vir:98 152 RLPWGPDSWVYTGTADSGDVHDLGGMQLVEFARMPDLGEDPEPEFAGVLDIQDRVNLGILNRMAASRFSGFRQKWIKGH- 230 (434) T ss_pred ccccccccceecccccccccCCCCccceEEeccCCCcCcCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcchhhhhcCC- Confidence 011124555554433336889888888888877776665555555445565444321 Q ss_pred CCCH--HHHHHHHHHHHHHhcccccCceeecc-CCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchh Q lcl|Aclame:pro 210 QLSG--DARQRARQEFEKMREGSVGGSPLVFD-STMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQS 286 (406) Q Consensus 210 ~~~~--e~~~~~~~~~~~~~~g~~~~~~~vl~-~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n 286 (406) ...+ +........+ +.... ..+++++++ ++.++.++....- ..+++..+..+..|+..=++|+..+|...++++ T Consensus 231 ~~~~~~~~~~~~~~~~-~~~~~-~~~~i~~~~~~~~~~~q~~~~~~-~~~~~~l~~~i~~~~~~~~~p~~~~~~~~~n~S 307 (434) T protein:vir:98 231 KFAKRTDPATGMTVVD-QPFVP-SPSAVWASEGENTQFGQLDATDL-SGFLKEHASDVRDMLTISQTPTYLYATDLVNIS 307 (434) T ss_pred Ccccccccccccchhh-hhhhc-cccccccCCCCCceEEEecCcch-HHHHHHHHHHHHHHhcccCCCHHHhccccCChH Confidence 1111 1111111111 11211 123455555 4678877765432 336778888899999999999999986433333 Q ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHhh------ccC-ccchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHH Q lcl|Aclame:pro 287 VAQLMEDYVTNDLPFYF----DAITSELGLK------TLN-DKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQ 353 (406) Q Consensus 287 ~~~~~~~~~~~~i~P~~----~~ie~~l~~~------l~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE 353 (406) .+... +....+.-.+ +.+.+.|.+. +.. ..+...+.+.| .......+.++++.++++.|+ +..- T Consensus 308 g~Al~--~~~~~l~~k~~~k~~~f~~~l~~~~rl~~~~~g~~~~~~~~~v~w~~~~~~s~~~~ada~~kl~~~g~-~~e~ 384 (434) T protein:vir:98 308 ADTIG--ALDILHVAKVREHIASFSEGLESVLALAAAQAGVPEDYTEAEVRWANPAHVTMAVKADAATKLKSIGY-PLDV 384 (434) T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhheeeeEEecCCCCCCHHHHHHHHHHHHhcCC-cHHH Confidence 22211 1111111111 2222222111 111 01111222222 223356677888888888886 7777 Q ss_pred HHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 354 GLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 354 ~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) +++++|+++- + -.++..-..-..+.... ......+..+|+.+++++-. T Consensus 385 ~~~~lg~~~~--e-~~r~~~e~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~ 432 (434) T protein:vir:98 385 IAEELDESPA--R-VRRIVAGAASQALLAAS--LLPAPGAPSAGNVPDSGGAV 432 (434) T ss_pred HHHhCCCCHH--H-HHHHHHHHHHHHHHHHh--hhccCCCCCCCCCCcccCCC Confidence 8888887652 1 11111000000000000 00011111222222222222 No 148 >protein:vir:2427 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:52 # MgeName: D29 # Cross-refs: genbank:acc:NP_046829;genbank:gi:9630397;genbank:GeneID:1261620 Probab=98.72 E-value=1.8e-08 Score=63.05 Aligned_cols=387 Identities=10% Similarity=-0.001 Sum_probs=158.7 Q ss_pred Ccc------------c-ccccCCCCcchhhHHHhhcCCcc-----cccchhhh---hccHHHHHHHHHHHHhhccceeEE Q lcl|Aclame:pro 1 MSF------------F-QPLGTSKVSYDDYISSVLAGDVS-----QKYLGVSA---LKNSDILTATSIIAGDIARFPLVK 59 (406) Q Consensus 1 M~~------------f-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~a---~~~~~v~~~i~~ia~~ia~~~~~~ 59 (406) +|+ + +....+ .+.-..+..+..|... ..+.+... ....-..-+|+..+..+.-.+|. T Consensus 6 ~~~~~~~~~~~~~~~L~~~~~~~-~~r~~~~~~YY~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~- 83 (485) T protein:vir:24 6 PGQEEIADPAIARDEMVSAFEDQ-NQNLRSNTSYYEAERRPEAIGVTVPVQMQSLLAHVGYPRLYVDSIAERQAVEGFR- 83 (485) T ss_pred CCCCcccchHHHHHHHHHHHHHH-HHHHHHHHHHHhccCchhhcCcccchhhhhhhhccchHHHHHHHHhhhhccCcee- Confidence 221 0 000000 0000011111111111 00111000 00011122233333322222332 Q ss_pred EecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc------eeEEEeecCCeeEEEEEcc Q lcl|Aclame:pro 60 KDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN------QALQFQFYRPSETTVEETD 133 (406) Q Consensus 60 ~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g------~~~~l~~l~p~~~~~~~~~ 133 (406) .++.......+..++.. | ........+..+.+.+|.||.++.++..+. ....+.+++|..+.+.++. T Consensus 84 --~~~~~~~~~~l~~i~~~--N---~~d~~~~~~~~~a~i~G~ay~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~~i~D~ 156 (485) T protein:vir:24 84 --LGDADEADEELWQWWQA--N---NLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNVPLIRVEPPTRMYAEIDP 156 (485) T ss_pred --cCCCchhHHHHHHHHHh--c---ChhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCcceEEEeccceeEEEeeC Confidence 22222222334444432 2 344677889999999999999988764321 1124677888888777664 Q ss_pred C-cceEE--EEEee-cCCeE---EEEcce-------------------------eeEeeccCC-CCCccccCHHH-HHHH Q lcl|Aclame:pro 134 N-HEIVY--TFTDM-LTAKQ---VKCFAH-------------------------DVIHWKFFS-HDTILGRSPLL-SLGD 179 (406) Q Consensus 134 ~-g~~~~--~~~~~-~~g~~---~~~~~~-------------------------~vih~r~~~-~~~~~G~s~~~-~~~~ 179 (406) . +.+.+ .+... ..+.. ..+..+ .|++|++++ ..+++|.|-+. .+.. T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~~G~s~i~~~v~~ 236 (485) T protein:vir:24 157 RIGRPAKAIRVAYDAEGNEIQAATLYTPNETFGWFRAEGEWVEWFSDPHGLGAVPVVPLPNRTRLSDLYGTSEITPELRS 236 (485) T ss_pred CcCceeEEEEEEEeecCCeEEEEEEEcCCcEEEEEecCCceEeecccccCCCcccEEEeccCcccCCcCCcccchhhHHH Confidence 3 22211 11111 11110 012222 245555432 23467887665 2344 Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHH----HHHHHHHHHHhcccccCceeecc-CCceeeeccCChhHH Q lcl|Aclame:pro 180 EIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDAR----QRARQEFEKMREGSVGGSPLVFD-STMEYTPLEIDTNVL 254 (406) Q Consensus 180 ~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~----~~~~~~~~~~~~g~~~~~~~vl~-~g~~~~~l~~~~~d~ 254 (406) .++..+.+..-........+.|..++... ++++. +.-...|+. ..+.+++++ ++.++.++....-+ T Consensus 237 liDa~~~~~s~~~~~~~~~a~p~~~i~G~---~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~q~~~~~~e- 307 (485) T protein:vir:24 237 MTDAAARILMLMQATAELMGVPQRLIFGI---KPEEIGVDPETGQTLFDA-----YLARILAFEDAEGKIQQFSAAELA- 307 (485) T ss_pred HHHHHHHHHHHHHHHHHhhcchhhhhccC---Cccccccccccccchhhh-----cccceeccCCCCceEEeecccchH- Confidence 44444333333333333334454444321 11111 111111211 123455554 56788777654333 Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHhcccccc-hhH-------------HHHHHHHHHHHHHHHHHHHHHHHHhhccCccch Q lcl|Aclame:pro 255 QLITSNNFSTAQIAKALRVPSYKLGVNSPN-QSV-------------AQLMEDYVTNDLPFYFDAITSELGLKTLNDKDR 320 (406) Q Consensus 255 ~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~-~n~-------------~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~ 320 (406) .+++..+..+.+++..=++|+..+|....+ ++. .+..+..+...|.-+++.+....+. .-...+. T Consensus 308 ~~~~~l~~~i~~~s~~~~~p~~~fg~~~~n~~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~~~-~~~~~d~ 386 (485) T protein:vir:24 308 NFTNALDQIAKQVAAYTGLPPQYLSTAADNPASAEAIRAAESRLIKKVERKNAIFGGAWEEAMRLAYRLMKG-GDVPPDM 386 (485) T ss_pred HHHHHHHHHHHHHhcccCCCHHHhccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCcccc Confidence 477888888888999999999999865432 111 1222233333444444433322111 0001111 Q ss_pred hhhhhhhc--ccchhHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCCCCCCCeeeec---cCccchhhcccccccc-Cc Q lcl|Aclame:pro 321 RLYHIEFD--TRSVTGRNVDEIVKLVNNQ--ILTPNQGLVELGKQKSTDPNMDRYQSS---LNYVFLDKKEEYQDKV-GI 392 (406) Q Consensus 321 ~~~~~~~~--~~~~~~~~~~~~~~~~~~g--~~t~NE~R~~~g~~p~~~~~gd~~~~~---~n~~~~~~~~~~~~~~-~~ 392 (406) ..+.+.|. ......+.++++.+++++| +++..-+++++|+.+-+-+...+..-- .+...++......... .. T Consensus 387 ~~i~v~f~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~l~~~~d~~~e~~~~~ee~~~~~~~~~~~~~~~~~~~~~~ 466 (485) T protein:vir:24 387 LRMETVWRDPSTPTYAAKADAATKLYGNGQGVIPRERARKDMGYSIAEREEMRRWDEEEAAMGLGLLGTMVDADPTVPGS 466 (485) T ss_pred ceeeEEecCCCCCCHHHHHHHHHHHHhcccccCCHHHHHhhCCCCHhHHHHHHHHHHHHhhhhhhHHHhhcccCCCCCCC Confidence 22333442 2335667788888888765 778877888888865322111111100 0111111111100100 01 Q ss_pred ccCCCccCCCC----CCC Q lcl|Aclame:pro 393 KGKGGEVNAEE----DKS 406 (406) Q Consensus 393 ~~~gg~~~~~~----~~~ 406 (406) +..+++.+++. +.+ T Consensus 467 ~~~~e~~~~~~~~~~~~~ 484 (485) T protein:vir:24 467 PNPTPAPKPQPAIEGGDS 484 (485) T ss_pred CCCCCCCCCccCCCCCCC Confidence 11111111111 112 No 149 >protein:vir:7768 Length: 484 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:149 # MgeName: Bxz2 # Cross-refs: genbank:acc:NP_817602;genbank:gi:29566032;genbank:GeneID:1259226 Probab=98.61 E-value=3.7e-08 Score=61.30 Aligned_cols=389 Identities=9% Similarity=0.011 Sum_probs=153.9 Q ss_pred CcccccccCCCC----------------cchhhHHHhhcCCcc-----cccchhh---hhccHHHHHHHHHHHHhhccce Q lcl|Aclame:pro 1 MSFFQPLGTSKV----------------SYDDYISSVLAGDVS-----QKYLGVS---ALKNSDILTATSIIAGDIARFP 56 (406) Q Consensus 1 M~~f~~~~~~~~----------------~~~~~~~~~~~~~~~-----~~~~~~~---a~~~~~v~~~i~~ia~~ia~~~ 56 (406) |+-.=+.-.... ..-..+..+..|... ....+.. .....-..-+|+..+..+--.. T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~rl~~l~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g 80 (484) T protein:vir:77 1 MTSPLQKQENVDPEKAREEMLNLFTERTQDLGDNTAYYESERRPDAVGVTVPQQMQKLLAHVGYPRLYIDAIAARQELEG 80 (484) T ss_pred CCCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccccchhHHhhhhhcCcHHHHHHHHHhhhccCc Confidence 332111100000 000111122222111 0000000 0001111223343333322223 Q ss_pred eEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCcee-------EEEeecCCeeEEE Q lcl|Aclame:pro 57 LVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQA-------LQFQFYRPSETTV 129 (406) Q Consensus 57 ~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~-------~~l~~l~p~~~~~ 129 (406) |.+ .+.......+..++. .-........+..+.+.+|.+|.++.++.. |.+ ..+.+++|..+.+ T Consensus 81 ~~~---~~~~~~~~~l~~i~~-----~N~~d~~~~~~~~~a~~~G~a~~~v~~~~~-~~~~~~~~~~~~i~~~~p~~~~~ 151 (484) T protein:vir:77 81 FRL---GGADKADEQLWDWWQ-----ANDLDIESTLGHTDSLVHGRSYITISKPDP-NIDPGVDPEVPIIRVEPPTNLYA 151 (484) T ss_pred eec---CCcchhHHHHHHHHH-----hcCHhHHHHHHHHHHhhcCceEEEEecCCC-CcccccccccceEEEeccceeEE Confidence 322 222222233444432 123346678889999999999998887744 332 2366778888777 Q ss_pred EEccC-cceEEE--EEee-cCCeE---EEEcce-------------------------eeEeeccCCC-CCccccCHHHH Q lcl|Aclame:pro 130 EETDN-HEIVYT--FTDM-LTAKQ---VKCFAH-------------------------DVIHWKFFSH-DTILGRSPLLS 176 (406) Q Consensus 130 ~~~~~-g~~~~~--~~~~-~~g~~---~~~~~~-------------------------~vih~r~~~~-~~~~G~s~~~~ 176 (406) .++.. +.+... +... ..+.. ..+.++ .|++|+++.. .+++|.|.+.- T Consensus 152 ~~D~~~~~~~~a~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~N~~~~~~~~G~s~i~~ 231 (484) T protein:vir:77 152 QIDPRTRQVMRAIRAIEDEEGNEVIGATLYLPNNTVIWNREDGQWVQVANVAHNLEMVPVIPIPNRTRLSDLYGTTEITP 231 (484) T ss_pred EecCCCCceEEEEEEEEeecCCcEEEEEEEecCeEEEEEecCCceEeeccccCCCCCcceEEeccccccCccCCcccchH Confidence 66543 221111 0101 11100 011111 2455554332 23577776542 Q ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHH--HHHHHHHHHHhcccccCceeecc-CCceeeeccCChh Q lcl|Aclame:pro 177 -LGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDAR--QRARQEFEKMREGSVGGSPLVFD-STMEYTPLEIDTN 252 (406) Q Consensus 177 -~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~--~~~~~~~~~~~~g~~~~~~~vl~-~g~~~~~l~~~~~ 252 (406) +...++..+.............+.|..++... ...+... ++-...|+.. .+.++.++ ++.++.++....- T Consensus 232 ~v~~L~Da~~~~~s~~~~~~~~~a~p~~~i~G~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~q~~~~~~ 305 (484) T protein:vir:77 232 ELRSVTDAAARTLMLMQATAELMGVPQRLLFGV-KGEELGVDPETGQTLFDAY-----LARILAFEDHESKAQQFSAAEL 305 (484) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhCC-Ccchhcccccccchhhhhh-----hhhhcccCCCCceeEeecCCCh Confidence 33333333333222222222223444433311 1111100 1111112111 12345554 5678877765443 Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHhcccccc-hhHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhccCcc Q lcl|Aclame:pro 253 VLQLITSNNFSTAQIAKALRVPSYKLGVNSPN-QSVAQ-------------LMEDYVTNDLPFYFDAITSELGLKTLNDK 318 (406) Q Consensus 253 d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~-~n~~~-------------~~~~~~~~~i~P~~~~ie~~l~~~l~~~~ 318 (406) + -+++..+.....|+.+=++|++.+|....+ ++.+. ..+..+...+.-.++.+....+..-. .. T Consensus 306 e-~~~~~l~~~i~~~s~~~~~p~~~fg~~~~n~~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~~l~~~~~~~~~~-~~ 383 (484) T protein:vir:77 306 R-NFVDALDALDRKAAAYTGLPPYYLSFSSENPASAEAIRSSESRLVKTVERKNKIFGGAWEQAMRVAYKVMNGGDI-PP 383 (484) T ss_pred H-HHHHHHHHHHHHHhcccCCCHHHhccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-cc Confidence 3 377888888899999999999999865432 22111 11122222222222222211110000 01 Q ss_pred chhhhhhhh--cccchhHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCCCCCCCeeeeccC------ccchhhccc--c Q lcl|Aclame:pro 319 DRRLYHIEF--DTRSVTGRNVDEIVKLVNNQ--ILTPNQGLVELGKQKSTDPNMDRYQSSLN------YVFLDKKEE--Y 386 (406) Q Consensus 319 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g--~~t~NE~R~~~g~~p~~~~~gd~~~~~~n------~~~~~~~~~--~ 386 (406) +...+.+.| .......+.++++.+++++| +++..-+++++|+.+-+-+...+..-... +.++..... . T Consensus 384 ~~~~i~v~w~~~~~~s~~~~ad~~~kl~~~g~gi~s~et~~~~l~~~~~~~~e~~~~~~ee~~~~~~~~~~~~~~~~~~~ 463 (484) T protein:vir:77 384 EYYRMESIWRDPSTPTYAAKADAATKLYNNGQGVIPKERARIDMGYSITEREEMRKWDEEEQAQGLGLMGTMFGTDPSGG 463 (484) T ss_pred ccccceEEecCCCCCCHHHHHHHHHHHHhccCCCCCHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhccccccCC Confidence 111222233 12335667788888888876 88888888988886532221111110000 000000000 0 Q ss_pred ccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 387 QDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 387 ~~~~~~~~~gg~~~~~~~~~ 406 (406) .........++..+.++..+ T Consensus 464 ~~~~~~~~~~~~~~~~~~~~ 483 (484) T protein:vir:77 464 GNPDNPETPEPQPNPAEEAA 483 (484) T ss_pred CCCCCCCcccccCCCccccC Confidence 00000001111112222222 No 150 >protein:vir:99072 Length: 479 # NCBI annotation: gp27 # Family: family:all:524 # MgeID: mge:1671 # MgeName: Wildcat # Cross-refs: genbank:acc:YP_655892;genbank:gi:109521464;genbank:GeneID:4158037 Probab=98.58 E-value=2.5e-07 Score=56.75 Aligned_cols=382 Identities=9% Similarity=0.004 Sum_probs=161.5 Q ss_pred Cc-----------ccccccCCCCcchhhHHHhhcCCccc------c-cchhhhhc----cHHHHHHHHHHHHhhccceeE Q lcl|Aclame:pro 1 MS-----------FFQPLGTSKVSYDDYISSVLAGDVSQ------K-YLGVSALK----NSDILTATSIIAGDIARFPLV 58 (406) Q Consensus 1 M~-----------~f~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~a~~----~~~v~~~i~~ia~~ia~~~~~ 58 (406) |- +++....+. +.-..+..+..|.... . ......+. +.-..-+|+.+++.+- +. T Consensus 9 l~~~~~~~~~~~~l~~~~~~~~-~r~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~iVd~~~~~l~---~~ 84 (479) T protein:vir:99 9 LSSEGLAKYLETKVFPKMNTEC-ERLDDFEAWTKNGQEVPDLATRHKNKEREVLQQLSRKPWMGLMVNSFAQQLI---VD 84 (479) T ss_pred CChhHHHHHHHHHHHHHHHHHh-HHHHHHHHHHhcCCcccccccccCChhHHHHHHHhhcCcHHHHHHHHHhhcc---cc Confidence 00 111110000 0001111111111110 0 00111111 1112334554444332 22 Q ss_pred EEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEec----CCCceeEEEeecCCeeEEEEEccC Q lcl|Aclame:pro 59 KKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRD----PKTNQALQFQFYRPSETTVEETDN 134 (406) Q Consensus 59 ~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~----~~~g~~~~l~~l~p~~~~~~~~~~ 134 (406) -+...+. .....+..++.. | ........+..+.+.+|.+|.++... ...|.+ .+..++|..+.+.+++. T Consensus 85 gf~~~d~-~~~~~~~~i~~~--N---~~d~~~~~~~~~a~~~G~af~~v~~~~~~~d~~g~~-~i~~~~p~~~~~iydd~ 157 (479) T protein:vir:99 85 GYRKTGT-NENAKGWDTWRL--N---QMDKQQFWLNRAVLTFGYAFIKVTSGISPLDGTTVA-RIKCIDPRDAFAIWEDP 157 (479) T ss_pred cccCCCc-hhhHHHHHHHHh--c---ChhHHHHHHHHHHhhcCceEEEEecCCCCcCCCCce-EEEEechhheEEEecCC Confidence 2222211 122334444432 3 22356677888999999999887642 122333 46677888887766543 Q ss_pred cc---eEEEEEeecCCeEEEE-------------------------cceeeEeeccCCCCCccccCHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 HE---IVYTFTDMLTAKQVKC-------------------------FAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTG 186 (406) Q Consensus 135 g~---~~~~~~~~~~g~~~~~-------------------------~~~~vih~r~~~~~~~~G~s~~~~~~~~i~~~~~ 186 (406) .. ..|.+.....+....+ ..=.|++|++++....+|.|.++.+...++..+. T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~g~sd~e~v~~liDa~~~ 237 (479) T protein:vir:99 158 YWDEWPKYLLERQPNGQYWWWTEEDYSIFEFKQGKFIYRETVSHDYGHIPFVRYVNVMDLRGVCYGDVEPLVTVAKAIDK 237 (479) T ss_pred cccceeeEEEeecCceeEEEEecceEEEEEecCCceeeccccccCCCCcceEEeecCCCcCcCCcchhHHHHHHHHHHHH Confidence 21 1222222111111111 1112455665544345689988887777777666 Q ss_pred HHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCcee-eccCCceeeeccCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 187 GINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPL-VFDSTMEYTPLEIDTNVLQLITSNNFSTA 265 (406) Q Consensus 187 ~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~-vl~~g~~~~~l~~~~~d~~~~e~~~~~~~ 265 (406) ...-....+.-.+.|..++........+..+. ..+.- ..++++ .-+++.++.++.... -..+++..+.... T Consensus 238 ~~s~~~~~~~~~a~p~~~i~G~~~~~~~~~~~--~~~~~-----~~~~i~~~~~~~~~~~q~~~~~-~~~~~~~l~~~i~ 309 (479) T protein:vir:99 238 TGLDILLVQHHQSFQIRWATGLMLPEGANADQ--EKMRF-----AQESMLISQNEKASFGAIPAAP-LDGLLNAYKESLL 309 (479) T ss_pred HHHHHHHHHHHhhchhhhhcCCCcccccccch--hcccc-----ccccceeecCCCceEEEecccc-hHHHHHHHHHHHH Confidence 66555555555555655544221111111110 01111 112233 345667777765422 2346677778888 Q ss_pred HHHHHhcCCHHHhcccccchh--H----------HHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhh-c-ccc Q lcl|Aclame:pro 266 QIAKALRVPSYKLGVNSPNQS--V----------AQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEF-D-TRS 331 (406) Q Consensus 266 ~Ia~~fgvpp~~lg~~~~~~n--~----------~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~-~-~~~ 331 (406) +|+.+=++|++.+|..++.|. + .+..+..+..+|.-+++.+....+... ......+.+.| + ... T Consensus 310 ~i~~~t~~p~~~~g~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~al~~~~~l~~~~~~~~~--~~~~~~i~~~w~~~~~~ 387 (479) T protein:vir:99 310 EFLALAQLPPHIAGQIVNVAADALAAGTRQTMQKLFEKQATWKASHNQTMRLVNKIEGRTE--EATDLDFTITWQDVTIQ 387 (479) T ss_pred HHhccCCCCHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--cccceeeeEEecCCCCC Confidence 999999999999986543221 1 112222333334333333322111000 00111122222 1 122 Q ss_pred hhHHHHHHHHHHHhCCCcCHHHHHHHh-CCCCCCCCCCCeeeeccC-ccc----hhhcccccccc-CcccCCCccCCCCC Q lcl|Aclame:pro 332 VTGRNVDEIVKLVNNQILTPNQGLVEL-GKQKSTDPNMDRYQSSLN-YVF----LDKKEEYQDKV-GIKGKGGEVNAEED 404 (406) Q Consensus 332 ~~~~~~~~~~~~~~~g~~t~NE~R~~~-g~~p~~~~~gd~~~~~~n-~~~----~~~~~~~~~~~-~~~~~gg~~~~~~~ 404 (406) ...+.++++.+++++|+++...+.+++ |+++- .-+....-.. ... .+.......+. .....+|..+.++. T Consensus 388 s~~~~ad~~~kl~~ag~is~et~l~~l~gv~~~---~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (479) T protein:vir:99 388 SLAQFADAWAKMVESLKIPAEGVWDMIPNLDQS---TVNGWKEIYDREGDFGKYMRKLQNGPDPAEQRGGPNGATNMQQA 464 (479) T ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHhcCCCCHH---HHHHHHHHHHHHHHHHHHHHHHhcccCcccccCCCCCCCCCCCC Confidence 456778888889999999998888777 77542 1111100000 000 00000000100 11111122222222 Q ss_pred CC Q lcl|Aclame:pro 405 KS 406 (406) Q Consensus 405 ~~ 406 (406) .+ T Consensus 465 ~~ 466 (479) T protein:vir:99 465 NN 466 (479) T ss_pred CC Confidence 22 No 151 >protein:vir:104082 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:1656 # MgeName: Che12 # Cross-refs: genbank:acc:YP_655593;genbank:gi:109392464;genbank:GeneID:4156950 Probab=98.55 E-value=1.3e-07 Score=58.33 Aligned_cols=388 Identities=11% Similarity=0.012 Sum_probs=155.8 Q ss_pred Ccc-----------------c-ccccCCCCcchhhHHHhhcCCccc-cc---chhhhhc----cHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MSF-----------------F-QPLGTSKVSYDDYISSVLAGDVSQ-KY---LGVSALK----NSDILTATSIIAGDIAR 54 (406) Q Consensus 1 M~~-----------------f-~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~a~~----~~~v~~~i~~ia~~ia~ 54 (406) |.- + +.... ..+.-..+..+..|.... .. .+...-. ..-..-+|+.++..+-- T Consensus 1 ~~~~i~~~~~~~~~~~~~~~l~~~~~~-~~~r~~~~~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~ 79 (485) T protein:vir:10 1 MTAPLPGQEEIEDPAIARDEMVSAFED-STQNLKTNTSYYEAERRPEAIGVTVPIQMQSLLAHVGYPRLYVDSIAERQAV 79 (485) T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCcchhcCCCCChhhhhhhhhcCcHHHHHHHHHhhhcc Confidence 110 0 00000 000001111222221110 00 0101000 11112334444433311 Q ss_pred ceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC-------CceeEEEeecCCeeE Q lcl|Aclame:pro 55 FPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK-------TNQALQFQFYRPSET 127 (406) Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~-------~g~~~~l~~l~p~~~ 127 (406) -.| +.++.......+..++. .-....+...+..+.+++|.||.++.++.. .+. ..+.+++|..+ T Consensus 80 ~g~---~~~~~~~~~~~~~~i~~-----~N~~d~~~~~~~~~a~i~G~ay~~v~~~e~~~~~~~~~~~-~~i~~~~p~~~ 150 (485) T protein:vir:10 80 EGF---RFGDADEADEELWQWWQ-----ANNLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNT-PIIRVEPPTRM 150 (485) T ss_pred cce---ecCCCchhHHHHHHHHH-----hcCHhHHHHHHHHHHhhcCceEEEEeeCCcccccccCCCe-eEEEEEcccee Confidence 122 22222222233444442 123456778899999999999999887642 122 24677888888 Q ss_pred EEEEccCc-ceEE--EEEeec-CCe---EEEEccee-------------------------eEeeccCCC-CCccccCHH Q lcl|Aclame:pro 128 TVEETDNH-EIVY--TFTDML-TAK---QVKCFAHD-------------------------VIHWKFFSH-DTILGRSPL 174 (406) Q Consensus 128 ~~~~~~~g-~~~~--~~~~~~-~g~---~~~~~~~~-------------------------vih~r~~~~-~~~~G~s~~ 174 (406) .+.++... .+.. .+.... .+. ...+.++. |++|.++.. .+.+|.|-+ T Consensus 151 ~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~i 230 (485) T protein:vir:10 151 YAEIDPRIGRVSKAIRVAYDAEGNEIQAATLYTPNDIFGWYRVENEWQEWFNNPHGLGVVPVVPIPNRTRLSDLYGTSEI 230 (485) T ss_pred EEEEcCCCCceeEEEEEEEeeCCCeEEEEEEEeCCeEEEEEEcCCceEEeccccCCCCcccEEEeccccccCCCCCccch Confidence 77776433 2211 111111 111 01122222 344443322 245677755 Q ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHH--HHHHHHHHHHhcccccCceeecc-CCceeeeccCC Q lcl|Aclame:pro 175 LS-LGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDAR--QRARQEFEKMREGSVGGSPLVFD-STMEYTPLEID 250 (406) Q Consensus 175 ~~-~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~--~~~~~~~~~~~~g~~~~~~~vl~-~g~~~~~l~~~ 250 (406) .- +...++..+...........-.+.|..++... ...+... ..-...|+. ..+.++.++ ++.++.++... T Consensus 231 ~~~v~~liDa~~~~~s~~~~~~~~~a~p~~~i~G~-~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~d~k~~q~~~~ 304 (485) T protein:vir:10 231 TPELRSMTDAAARILMLMQATAELMGVPQRLIFGI-KPEEIGVDPETGQTLFDA-----YLARILAFEDAEGKIQQFSAA 304 (485) T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHhcC-Ccccccccccccchhhhh-----cccceeccCCCCceEEeeccc Confidence 42 33333333332222222222233344433311 1110000 001111111 123455554 56788777654 Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccc-hhH-------------HHHHHHHHHHHHHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 251 TNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPN-QSV-------------AQLMEDYVTNDLPFYFDAITSELGLKTLN 316 (406) Q Consensus 251 ~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~-~n~-------------~~~~~~~~~~~i~P~~~~ie~~l~~~l~~ 316 (406) .-+ .+++..+....+|+.+=++|+..+|....+ ++. .+..+..+...+..+++.+....+ ..-. T Consensus 305 ~~~-~~~~~l~~~i~~~~~~~~~p~~~fg~~~~n~~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~l~~~~~~-~~~~ 382 (485) T protein:vir:10 305 ELA-NFTNALDQIAKQVAAYTGLPPQYLSTAADNPASAEAIRAAESRLIKKVERKNSIFGGAWEEAMRLAYRMMK-GGDV 382 (485) T ss_pred chH-HHHHHHHHHHHHHhcccCCCHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCC Confidence 322 377888888899999999999999865422 221 112223333344443333222111 1000 Q ss_pred ccchhhhhhhh--cccchhHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCCCCCCCeeeeccCc---cchhhccccccc Q lcl|Aclame:pro 317 DKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQ--ILTPNQGLVELGKQKSTDPNMDRYQSSLNY---VFLDKKEEYQDK 389 (406) Q Consensus 317 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g--~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~---~~~~~~~~~~~~ 389 (406) ..+...+.+.| ....+..+.++++.+++++| +++..-+++++|+.+-+-+...+..--... ..++........ T Consensus 383 ~~~~~~i~v~w~~~~~~~~~~~ada~~kl~~ag~~~~s~et~~~~lg~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~ 462 (485) T protein:vir:10 383 PPDMLRMETVWRDPSTPTYAAKADAASKLYNGGTGVIPRERARKDMGYSIAEREEMRRWDEEEAAMGLGLIGTMVDPNPT 462 (485) T ss_pred cccceeeeEEecCCCCCCHHHHHHHHHHHHhccccCCCHHHHHHhCCCCHhHHHHHHHHHHHHHHHHHHHHHHhhccCCC Confidence 11112223333 22345667788888888866 888888999988875422111111100000 001100000000 Q ss_pred cCcc-cCCCccCCCCCCC Q lcl|Aclame:pro 390 VGIK-GKGGEVNAEEDKS 406 (406) Q Consensus 390 ~~~~-~~gg~~~~~~~~~ 406 (406) ..+. ..++..+....+| T Consensus 463 ~~~~~~~~~~~~~~~~~~ 480 (485) T protein:vir:10 463 VPGSPSPAPAPKPAALES 480 (485) T ss_pred CCCCCCccccccCcCCCC Confidence 0000 0000011111111 No 152 >protein:vir:99916 Length: 504 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1611 # MgeName: Halo # Cross-refs: genbank:acc:YP_655520;genbank:gi:109392290;genbank:GeneID:4157085 Probab=98.53 E-value=3.6e-07 Score=55.93 Aligned_cols=394 Identities=11% Similarity=0.044 Sum_probs=148.3 Q ss_pred Cc-cccccc---CCCC--cch--hh-----------------HHHhhcCCcccccchhh---hhccHHHHHHHH---HHH Q lcl|Aclame:pro 1 MS-FFQPLG---TSKV--SYD--DY-----------------ISSVLAGDVSQKYLGVS---ALKNSDILTATS---IIA 49 (406) Q Consensus 1 M~-~f~~~~---~~~~--~~~--~~-----------------~~~~~~~~~~~~~~~~~---a~~~~~v~~~i~---~ia 49 (406) |- ++.... .+.. +.+ ++ +..+..|.......+.. .++ .+.++++ +|. T Consensus 1 ~~~~~~~~~~~~~~~~~l~~~e~~~i~~L~~~~~~~~~r~~~l~~YY~G~~~i~~~~~~~p~~~~--~~~~v~n~~~~iV 78 (504) T protein:vir:99 1 MTEETTSASKFTFRIPELNDDVVDKVNGLYQQLVDRTPRNLLRASFYDGKYAIRQIGNLIPPEYL--RTATVLGWSAKAV 78 (504) T ss_pred CCccCCcccccccccCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhccccchhccccccHHHH--HHhhccCcHHHHH Confidence 22 110000 0000 000 01 11111111110000000 010 1122222 233 Q ss_pred Hhhcc-ceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCcee-EEEeecCCeeE Q lcl|Aclame:pro 50 GDIAR-FPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQA-LQFQFYRPSET 127 (406) Q Consensus 50 ~~ia~-~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~-~~l~~l~p~~~ 127 (406) +.+|. +-+.=++..+.......+..++. -|.. ......+..+.+++|.+|+++..+. +|.+ ..+.+++|..+ T Consensus 79 d~~a~rl~~~Gf~~~d~~~~~~~l~~i~~--~N~l---d~~~~~~~~~a~iyG~af~~v~~~~-d~~~~~~I~~~sP~~~ 152 (504) T protein:vir:99 79 DTLARRCNLESFVWPDGDYGSIGGPDVWD--ENFF---ATKANNAMVSSLIHGPAFLINTEGG-AGEPDSLIHVKSAMQA 152 (504) T ss_pred HHHHhhhccceeeCCCCChhhHHHHHHHH--hcCh---hhHHHHHHHHHHhhCceeEEEecCC-CCCceeEEEEecccee Confidence 33332 11221222222222223333332 2332 3556788889999999999888764 4555 35778899988 Q ss_pred EEEEccCc-ceEEE---EEeecCCeEE---EEccee------------------------eEeeccCCC-CCccccCHH- Q lcl|Aclame:pro 128 TVEETDNH-EIVYT---FTDMLTAKQV---KCFAHD------------------------VIHWKFFSH-DTILGRSPL- 174 (406) Q Consensus 128 ~~~~~~~g-~~~~~---~~~~~~g~~~---~~~~~~------------------------vih~r~~~~-~~~~G~s~~- 174 (406) .+.+++.. .+... +....+|... .+.++. |++|.+++. ..++|.|.+ T Consensus 153 ~~iyD~~~~~~~~a~~~~~~d~~g~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~gvPvV~~~n~~~~~~~~G~sei~ 232 (504) T protein:vir:99 153 TGEWNSRRNAMDSLLSITSRDAEGHPTGIALYEDGVTVTADMDDDGDWHADVRTHKLGVPVEVLPYKPREDRPLGSSRIT 232 (504) T ss_pred EEEEeCCCCceeEEEEEEEecCCCeEEEEEEEcCCcEEEEEEcCCceeeeccccCCCCcceEEecccccCccccCcccch Confidence 87776533 22111 1112222211 122333 344433322 335677744 Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCCcceEEee-cC-CCCH---HHHHHHHHHHHHHhccc-ccCceeeccCCceee Q lcl|Aclame:pro 175 ---LSLGDEIDLQTGGINTLIKFFKDGFSSGILTMK-GA-QLSG---DARQRARQEFEKMREGS-VGGSPLVFDSTMEYT 245 (406) Q Consensus 175 ---~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~-~~-~~~~---e~~~~~~~~~~~~~~g~-~~~~~~vl~~g~~~~ 245 (406) ..+...+.....-......++. .|..++.. .. ...+ +..+.++....+.+.-+ +......-..+.++. T Consensus 233 ~~v~~l~Da~~~~~~~~~~~~e~~a---~p~r~i~G~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 309 (504) T protein:vir:99 233 RPVMSLQQRALKGCIRMDGHADVYS---FPQLILLGADAKNFRNKDGSMKPAWQIALARVFALPDDEDEPDAARARADVK 309 (504) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc---chhhhhccCCccccccccccccchhhhhhhhhhcCCCccccccccCccceee Confidence 3333333333332233333333 23333321 11 1111 11223333333333211 111111122346666 Q ss_pred eccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccccc--chhHHHHH--HHHHHHHHHHHHHHHHHHHHhh------cc Q lcl|Aclame:pro 246 PLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSP--NQSVAQLM--EDYVTNDLPFYFDAITSELGLK------TL 315 (406) Q Consensus 246 ~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~--~~n~~~~~--~~~~~~~i~P~~~~ie~~l~~~------l~ 315 (406) ++....-+ .|++..+..+..|+.+=++|++.||.... .++.+... +.=+...+.-..+.+.+.|.+. +. T Consensus 310 q~~~~~l~-~~~~~l~~~i~~~a~~t~~P~~~lG~~~~~n~sSa~Ai~~~~~~L~~ka~~k~~~f~~~l~~~~rla~~~~ 388 (504) T protein:vir:99 310 QFPASSPQ-PHIEMLEQIAMMFSGETSIPVESLGFSNRANPTSADAYIASREDLIAEAEGATDDWSPAFRRSMIRALAIK 388 (504) T ss_pred ecCCCChH-HHHHHHHHHHHHHHhhhCCCHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 66554222 47888999999999999999999996443 22222111 1111111111222222222221 00 Q ss_pred C-----ccchhhhhhhh--cccchhHHHHHHHHHHHhCCCc--CH-HHHHHHhCCCCCCCC-CCCeeeeccCccchhhcc Q lcl|Aclame:pro 316 N-----DKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQIL--TP-NQGLVELGKQKSTDP-NMDRYQSSLNYVFLDKKE 384 (406) Q Consensus 316 ~-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~--t~-NE~R~~~g~~p~~~~-~gd~~~~~~n~~~~~~~~ 384 (406) . ..+.....+.| .......+.++++.++++.|.. .. .-+++++|+.+-+-. +-+..........++... T Consensus 389 ~~~~~~~~~~~~~~v~w~d~~~~s~a~~aDa~~Kl~~ag~~l~~~~~~l~~~lg~~~~ei~r~~~e~~~~~~~~~~~~l~ 468 (504) T protein:vir:99 389 NGLDRIPPEWKTIDSKFRSPLYLSKAAQADAGAKMLGAGPEWLKETEVGLELLGLTPQQAKRALAERRRASSVSIIEALN 468 (504) T ss_pred cCCCccccccccceeEecCCCccCHHHHHHHHHHHHhhccccccchHHHHhhcCCCHHHHHHHHHHHHHHhhHHHHHHHh Confidence 0 01111122222 1223456678888888888853 22 335567787653210 000000001111111111 Q ss_pred ccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 385 EYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 385 ~~~~~~~~~~~gg~~~~~~~~~ 406 (406) ..+....+...++++...+... T Consensus 469 ~~~~~~~~~~~~~~~~~~e~a~ 490 (504) T protein:vir:99 469 RRQQEAATAGEDQDQGAGEPPA 490 (504) T ss_pred cccCCCCCCCCCCCcCCCCCCC Confidence 1111111111111111000000 No 153 >protein:vir:7987 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:151 # MgeName: Che8 # Cross-refs: genbank:acc:NP_817341;genbank:gi:29565769;genbank:GeneID:1258964 Probab=98.50 E-value=1e-07 Score=58.91 Aligned_cols=375 Identities=11% Similarity=-0.019 Sum_probs=162.7 Q ss_pred Cc------ccccccC---CCCcchhhHHHhhcCCccc-----ccchh-----hhhccHHHHHHHHHHHHhhccceeEEEe Q lcl|Aclame:pro 1 MS------FFQPLGT---SKVSYDDYISSVLAGDVSQ-----KYLGV-----SALKNSDILTATSIIAGDIARFPLVKKD 61 (406) Q Consensus 1 M~------~f~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~-----~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 61 (406) |. |.+.+.. ...+.-..+..+..|.... ...+. ......-...+|+..++.+-.-|+.+.. T Consensus 1 ~~~~t~~~~~~~l~~~~~~~~~r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~~~ 80 (456) T protein:vir:79 1 MTASTPAEWLPVLTKRIDDGMSRVRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVGG 80 (456) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhcCcccChhhchhhhhhhcchHHHHHHHHHhhhccCCeecCC Confidence 11 1110000 0000001111222221110 00000 0011122345666666666666776432 Q ss_pred cCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc--eE- Q lcl|Aclame:pro 62 VNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE--IV- 138 (406) Q Consensus 62 ~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~--~~- 138 (406) . .+......+..++.. | ....+.+.+..+.+.+|.||.++..+ ..|.+ .+..++|..+.+.+++... +. T Consensus 81 ~-~d~~~~~~~~~~~~~--n---~~d~~~~~~~~~a~~~G~a~~~~~~~-edg~~-~i~~~~p~~~~~i~d~~~~~~~~~ 152 (456) T protein:vir:79 81 S-ADSDLALRARRIWRD--N---RMDSVCKQWVKYGLDFGESYLTCWRR-DDGTA-TITADSPETMVVSVDPLQPWRIRS 152 (456) T ss_pred C-CCccHHHHHHHHHHh--c---ChhHHHHHHHHHHhhcCeeEEEEeeC-CCCce-EEEEeccceeEEEEcCCCCCceEE Confidence 2 222222234444432 3 23466678899999999999988776 44666 4788889888877764321 10 Q ss_pred -EEEEeecCCeE--E-EEcce-------------------------------eeEeecc-C---CCCCccccCHHHHHHH Q lcl|Aclame:pro 139 -YTFTDMLTAKQ--V-KCFAH-------------------------------DVIHWKF-F---SHDTILGRSPLLSLGD 179 (406) Q Consensus 139 -~~~~~~~~g~~--~-~~~~~-------------------------------~vih~r~-~---~~~~~~G~s~~~~~~~ 179 (406) ..++...++.. . .+..+ ++-|.-. . +.+...|+|-++.+.. T Consensus 153 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~~~gd~e~v~~ 232 (456) T protein:vir:79 153 AMRWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHID 232 (456) T ss_pred EEEEEEecCCceeEEEEEcCCceEEEEEEEEeeccccceeeeccCCceeecccccCCCCceeEEEecCCCCCchhhhhHH Confidence 01111111100 0 00000 0011100 0 0112347777776666 Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEeecCC---CCHHHHH--HHHHHHHHHhcccccCceeeccCCceeeeccCChhHH Q lcl|Aclame:pro 180 EIDLQTGGINTLIKFFKDGFSSGILTMKGAQ---LSGDARQ--RARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVL 254 (406) Q Consensus 180 ~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~---~~~e~~~--~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~ 254 (406) .++..+....-........+.|..++..... ..++.-+ .....|... .+.++.++++.++.++....- . T Consensus 233 liD~~~~~~s~~~~~~~~~a~~~~~~~G~~~~~~~~d~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~q~~~~~~-~ 306 (456) T protein:vir:79 233 IINRINRAELQLLSTMAIQAFRQRALKSSEHRLPKVDENGNAIDYASIFEAA-----PGALWELPPGVDIWESQTNDF-T 306 (456) T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhcCCcccccccccccccchhhhhhhh-----ccccccCCCCcceeeecccCh-H Confidence 6655444332222222222233322221100 0011111 111122211 234566788888887765432 3 Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhccCccchh Q lcl|Aclame:pro 255 QLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQ-------------LMEDYVTNDLPFYFDAITSELGLKTLNDKDRR 321 (406) Q Consensus 255 ~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~-------------~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~ 321 (406) .+.+..+....+|+..=++|+..+|....+.+.+. ..+..+..+|.-+++.+. .+....+.. T Consensus 307 ~~~~~l~~~i~~i~~~t~~p~~~~~~~~~N~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~-----~~~g~~~~~ 381 (456) T protein:vir:79 307 PMLSAIKEHIRQLSSATKTPLPMLMPDSANQSAEGAHNIEKGFLFKCEDRLSIAKIGLEAILVKAL-----QIEGESVED 381 (456) T ss_pred HHHHHHHHHHHHHHhhcCCChhHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCCCccc Confidence 37788889999999999999999986432222111 111222223333332221 111111212 Q ss_pred hhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCcc Q lcl|Aclame:pro 322 LYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEV 399 (406) Q Consensus 322 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~ 399 (406) .+.+.| .......+.++++.++++.|+++..-+++++|+.+-+-+. ..+.-.. .+......+....++. T Consensus 382 ~i~v~w~~~~~~s~~~~ada~~kl~~~G~~~~~~~~~~lg~~~~~i~~-------~e~~r~~--~e~~~~~~~~~~~~~~ 452 (456) T protein:vir:79 382 TVDVSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQIKQ-------DDLDRAR--EQITLFAGNPVQRPQE 452 (456) T ss_pred cceEEeCCCCCcCHHHHHHHHHHHHhcCCChHHHHHhcCCCCHHHHHH-------HHHHHHH--HHHHHHhhhHhhcCCC Confidence 223333 1223456778888889999999988888888887531110 0000000 0001111111122232 Q ss_pred CCCC Q lcl|Aclame:pro 400 NAEE 403 (406) Q Consensus 400 ~~~~ 403 (406) +... T Consensus 453 ~~~~ 456 (456) T protein:vir:79 453 DGSR 456 (456) T ss_pred CCCC Confidence 3222 No 154 >protein:vir:95113 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240817;genbank:gi:66394677;genbank:GeneID:5133907 Probab=98.50 E-value=4.5e-07 Score=55.40 Aligned_cols=371 Identities=10% Similarity=0.003 Sum_probs=167.4 Q ss_pred CcccccccC--------CCCc-----------------chhhHHHhhcCCcc--------------cccchhhhhccHHH Q lcl|Aclame:pro 1 MSFFQPLGT--------SKVS-----------------YDDYISSVLAGDVS--------------QKYLGVSALKNSDI 41 (406) Q Consensus 1 M~~f~~~~~--------~~~~-----------------~~~~~~~~~~~~~~--------------~~~~~~~a~~~~~v 41 (406) |-+=++.+. .... .-..+..+..|... ....+..-+.++-. T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~Yy~g~~~i~~r~~~~~~~~~~~~~~~~~ki~~n~~ 86 (474) T protein:vir:95 7 MPWDKPYGEEVVEQLKPQFETQEEMIIRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVYGNIDYDKPDWRITTNFH 86 (474) T ss_pred cCCCCchhhHHHHhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHhcccCchhccccccccccccccccccceeccchH Confidence 222111000 0000 00001111111100 00000111123334 Q ss_pred HHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEee Q lcl|Aclame:pro 42 LTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQF 121 (406) Q Consensus 42 ~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~ 121 (406) ..+|+..+.-+-.-|+.+...+ + .....+..++. | ........+....+.+|.+|.++..+. +|++ .+.. T Consensus 87 ~~Ivd~~~~~l~g~p~~~~~~d-~-~~~~~l~~~~~---n---~~~~~~~e~~~~~~~~G~~~~~v~~d~-~~~~-~i~~ 156 (474) T protein:vir:95 87 QNLVDQKVSYVASKPVTYSCED-E-SVLKIIHDVLD---T---RWDNKLIDILTATSNKGIDWLQVYINE-NGEM-KLFR 156 (474) T ss_pred HHHHHHHHhhhccCCceeccCc-h-HHHHHHHHHHh---c---cHHHHHHHHHHHHhhcCcEEEEEEecC-CCce-EEEE Confidence 4556666666666676553222 1 11222222221 2 345566778889999999999888764 4665 4777 Q ss_pred cCCeeEEEEEccC--cceEE---EEEeecCCeEEEEcceeeEeecc----------------------CC---------C Q lcl|Aclame:pro 122 YRPSETTVEETDN--HEIVY---TFTDMLTAKQVKCFAHDVIHWKF----------------------FS---------H 165 (406) Q Consensus 122 l~p~~~~~~~~~~--g~~~~---~~~~~~~g~~~~~~~~~vih~r~----------------------~~---------~ 165 (406) ++|..+.+.+++. +.+.. ++..........+....+.+++. ++ . T Consensus 157 ~~p~~~~~v~d~~~~~~~~~~i~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~ 236 (474) T protein:vir:95 157 VPAEQAIPIWVDKEREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHIQSHFSNGNWGRVPFIAFK 236 (474) T ss_pred EcccceEEEEcCCCCCceEEEEEEEEEcCeeEEEEEeCCeEEEEEEcCCccccccccCcccccccccccCCCccceEeec Confidence 8888888777653 23221 11111111222233444444321 00 1 Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceee Q lcl|Aclame:pro 166 DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYT 245 (406) Q Consensus 166 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~ 245 (406) +...|.|-++.+...++..+.+.....+.++....|-.++....... .+.+.. .. ...+++.++++.+++ T Consensus 237 nn~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~~~~---~~~~~~----~~---~~~~~i~~~~~~~~~ 306 (474) T protein:vir:95 237 NNPEEVSDIWMYKSLIDAIDKRLSDAQNMFDESVELIYILKGYEGQD---LEEFMR----GL---KYYKAINVDGDGGVE 306 (474) T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCccc---chhhhh----hh---hccceeeccCCCcee Confidence 12457888888888887766666555555666666655554322111 111111 11 124466677777766 Q ss_pred eccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhc-ccccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 246 PLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLG-VNSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGL 312 (406) Q Consensus 246 ~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg-~~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~ 312 (406) .++.......+....+...+.|+..-++|..-.+ ..++-|. ..+..+..+...|.-+++.|.+.+.. T Consensus 307 ~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~g~ 386 (474) T protein:vir:95 307 TIQVEVPVSSTKEYIDLMRAYIMEFGQGVDFQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELIGFIIDFNNL 386 (474) T ss_pred EEeecCCHHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC Confidence 6665555666777788888999999999863332 1221111 11233345555666666665554432 Q ss_pred hccCccchhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcccccc-- Q lcl|Aclame:pro 313 KTLNDKDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQD-- 388 (406) Q Consensus 313 ~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~-- 388 (406) + .+...+.+.|. ...+.. +.+..+.+.|+++...+.++++.-.-+....+++- -+.....+. T Consensus 387 ~----~d~~~i~v~f~~~~p~d~~---e~a~~~~~~g~iS~et~i~~l~~v~d~~~E~~ri~-------~E~~~~~~~~~ 452 (474) T protein:vir:95 387 K----MDVKDIEISFNFNRMMNDA---EQSQIIAQSQYLSRETLVKSSPLVDDYKAELERIE-------QEQMEYNKQLP 452 (474) T ss_pred C----cccceeeEEeccCCCcCHH---HHHHHHHhcCCCchHHHHHhCCCCCCHHHHHHHHH-------HHHHHHHhccc Confidence 1 22223334442 223333 33444566799999888887754321111111110 000000000 Q ss_pred c--cCcc---cCCCccCCCCCC Q lcl|Aclame:pro 389 K--VGIK---GKGGEVNAEEDK 405 (406) Q Consensus 389 ~--~~~~---~~gg~~~~~~~~ 405 (406) . .... ..+.++++++.+ T Consensus 453 ~~~~~~~d~~~~~~~~~~~~~~ 474 (474) T protein:vir:95 453 NLDDGGADGAQQQERSNDKESE 474 (474) T ss_pred ccccccCCCCcCCCCCccCCCC Confidence 0 0000 111111222222 No 155 >protein:vir:4223 Length: 486 # NCBI annotation: predicted 53.7Kd protein # Family: family:all:524 # MgeID: mge:89 # MgeName: L5 # Cross-refs: genbank:acc:NP_039678;swissprot:sw:q05220;genbank:gi:9625444;uniprot:Q05220;genbank:GeneID:2942930;interpro:IPR010859 Probab=98.49 E-value=1.7e-07 Score=57.72 Aligned_cols=390 Identities=10% Similarity=-0.005 Sum_probs=155.7 Q ss_pred CcccccccCCCCcchh-----------------hHHHhhcCCcccc----cchhhhhc----cHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDD-----------------YISSVLAGDVSQK----YLGVSALK----NSDILTATSIIAGDIARF 55 (406) Q Consensus 1 M~~f~~~~~~~~~~~~-----------------~~~~~~~~~~~~~----~~~~~a~~----~~~v~~~i~~ia~~ia~~ 55 (406) |-.--+.-........ .+..+..|..... ..+..... ..-..-+|+.++..+--. T Consensus 1 ~~~~~~~~~e~~~~~~~~~~l~~~~~~~~~r~~~l~~YY~G~~~i~~~~~~~~~~~~~~~~v~n~~~~iVd~~~~~l~~~ 80 (486) T protein:vir:42 1 MTAPLPGMEEIEDPAVVREEMISAFEDASKDLASNTSYYDAERRPEAIGVTVPREMQQLLAHVGYPRLYVDSVAERQAVE 80 (486) T ss_pred CCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchhcccccchhHhhhhhccchHHHHHHHHHhhhccc Confidence 1111110000110000 1111122211100 00111000 111223344444433222 Q ss_pred eeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC------ceeEEEeecCCeeEEE Q lcl|Aclame:pro 56 PLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKT------NQALQFQFYRPSETTV 129 (406) Q Consensus 56 ~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~------g~~~~l~~l~p~~~~~ 129 (406) .|. .++.......+..++. -|. .......+..+++.+|.+|.++.++..+ .....+.+++|..+.+ T Consensus 81 g~~---~~~~~~~~~~~~~i~~--~N~---~d~~~~~~~~~a~~~G~ay~~v~~~e~~~~~~~~~~~~~i~~~~p~~~~~ 152 (486) T protein:vir:42 81 GFR---LGDADEADEELWQWWQ--ANN---LDIEAPLGYTDAYVHGRSFITISKPDPQLDLGWDQNVPIIRVEPPTRMHA 152 (486) T ss_pred cee---cCCCchhHHHHHHHHH--hcC---hhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCeeEEEEecccceEE Confidence 332 2222222233444442 232 3456678889999999999988775321 1123566788888777 Q ss_pred EEccC-cceEEEE--Eeec-CCeEE---EEcce-------------------------eeEeeccCC-CCCccccCHHHH Q lcl|Aclame:pro 130 EETDN-HEIVYTF--TDML-TAKQV---KCFAH-------------------------DVIHWKFFS-HDTILGRSPLLS 176 (406) Q Consensus 130 ~~~~~-g~~~~~~--~~~~-~g~~~---~~~~~-------------------------~vih~r~~~-~~~~~G~s~~~~ 176 (406) .++.. +++.+.+ .... .+... .+.++ .|++|+++. ..+++|.|-++- T Consensus 153 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~~~n~~~~~~~~G~s~i~~ 232 (486) T protein:vir:42 153 EIDPRINRVSKAIRVAYDKEGNEIQAATLYTPMETIGWFRADGEWAEWFNVPHGLGVVPVVPLPNRTRLSDLYGTSEITP 232 (486) T ss_pred EEeCCCCCeEEEEEEEEecCCCeEEEEEEEcCCcEEEEEecCCcEEeecceecCCCCceEEEeccccccCCCCCcccchh Confidence 76633 2221111 1111 11100 11122 234444332 234578775542 Q ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHH--HHHHHHHHHHhcccccCceeecc-CCceeeeccCChh Q lcl|Aclame:pro 177 -LGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDAR--QRARQEFEKMREGSVGGSPLVFD-STMEYTPLEIDTN 252 (406) Q Consensus 177 -~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~--~~~~~~~~~~~~g~~~~~~~vl~-~g~~~~~l~~~~~ 252 (406) +...++..+...........-.+.|..++... ....... ++-...|+. ..+++++++ ++.++.++..... T Consensus 233 ~v~~liDa~~~~~s~~~~~~e~~a~p~~~i~G~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~q~~~~~~ 306 (486) T protein:vir:42 233 ELRSMTDAAARILMLMQATAELMGVPQRLIFGI-KPEEIGVDSETGQTLFDA-----YLARILAFEDAEGKIQQFSAAEL 306 (486) T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcchHHHhhcC-Cccccccccccccchhhh-----hhchhcccCCCCceEEeecccCH Confidence 33333333333222222223333344443311 1110000 011111211 123455554 5677777655432 Q ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHhcccccc-hhH-------------HHHHHHHHHHHHHHHHHHHHHHHHhhccCcc Q lcl|Aclame:pro 253 VLQLITSNNFSTAQIAKALRVPSYKLGVNSPN-QSV-------------AQLMEDYVTNDLPFYFDAITSELGLKTLNDK 318 (406) Q Consensus 253 d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~-~n~-------------~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~ 318 (406) + .+++..+..+.+++..=++|+..+|....+ ++. .+..+..+...|.-+++.+....+..-. .. T Consensus 307 e-~~~~~l~~~i~~~s~~~~~p~~~fg~~~~n~~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~~~~~~-~~ 384 (486) T protein:vir:42 307 A-NFTNALDQIAKQVAAYTGLPPQYLSTAADNPASAEAIRAAESRLIKKVERKNLMFGGAWEEAMRIAYRIMKGGDV-PP 384 (486) T ss_pred H-HHHHHHHHHHHHHhcccCCCHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-cc Confidence 2 477888888899999999999999865322 111 1222333444444444433332221101 11 Q ss_pred chhhhhhhh--cccchhHHHHHHHHHHHhC--CCcCHHHHHHHhCCCCCCCCCCCeeeecc---CccchhhccccccccC Q lcl|Aclame:pro 319 DRRLYHIEF--DTRSVTGRNVDEIVKLVNN--QILTPNQGLVELGKQKSTDPNMDRYQSSL---NYVFLDKKEEYQDKVG 391 (406) Q Consensus 319 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--g~~t~NE~R~~~g~~p~~~~~gd~~~~~~---n~~~~~~~~~~~~~~~ 391 (406) +...+.+.| ....+..+.++++.+++++ |+++..-+++++|+.+-+-....++.--. ....++.......... T Consensus 385 d~~~i~v~w~~~~~~s~~~~ad~~~kl~~~~~g~~s~et~~~~lg~~~d~~~e~~~~~~e~~~~~~~~~~~~~~~~~~~~ 464 (486) T protein:vir:42 385 DMLRMETVWRDPSTPTYAAKADAATKLYGNGQGVIPRERARIDMGYSVKEREEMRRWDEEEAAMGLGLLGTMVDADPTVP 464 (486) T ss_pred cceeeeEEecCCCCCCHHHHHHHHHHHHhcccCCCCHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC Confidence 112233333 2234566778888888876 67888888888887543221111110000 0011111000000000 Q ss_pred cccCCCccCCCCCC-C Q lcl|Aclame:pro 392 IKGKGGEVNAEEDK-S 406 (406) Q Consensus 392 ~~~~gg~~~~~~~~-~ 406 (406) ....+++++..++. + T Consensus 465 ~~~~~~~~~~~~~~~~ 480 (486) T protein:vir:42 465 GSPSPTAPPKPQPAIE 480 (486) T ss_pred CCCCCCCCCCCCcccC Confidence 00111111111111 1 No 156 >protein:vir:5839 Length: 533 # NCBI annotation: similar to portal vertex protein of head # Family: family:all:1036 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835625;genbank:gi:30044028 Probab=98.49 E-value=1.4e-07 Score=58.09 Aligned_cols=394 Identities=13% Similarity=0.116 Sum_probs=189.6 Q ss_pred Cccccc--------------------ccCC---CCc---chhh-----HHHhhcCCcccc----cc--hhhhhccHHHHH Q lcl|Aclame:pro 1 MSFFQP--------------------LGTS---KVS---YDDY-----ISSVLAGDVSQK----YL--GVSALKNSDILT 43 (406) Q Consensus 1 M~~f~~--------------------~~~~---~~~---~~~~-----~~~~~~~~~~~~----~~--~~~a~~~~~v~~ 43 (406) |-||.+ .... ... ...+ ...+++| ...+ +. +..++.+|.|.+ T Consensus 4 ~~~w~~~de~~~~~~~~~~~~~~~~p~~~dG~s~i~~~~~~~~~~~~~~~~~~gg-~~~n~~eLI~~YR~ma~~~pEVd~ 82 (533) T protein:vir:58 4 LEKYKKLNEAVNFTNFLSPMYGMGAPHGAGGSSMIPINMYHPFATAGYASRFYGG-IEFNRFFLYDMYDRMDYTDPLIST 82 (533) T ss_pred cchhhhhhHHHHHHHhhchhhcccCccCCCCCccccCCCCcchhhhhhhhhhhcc-ccccHHHHHHHHHHhhccCcchhh Confidence 223322 1110 000 1011 1112221 1111 11 122456799999 Q ss_pred HHHHHHHhhccc-----eeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEE Q lcl|Aclame:pro 44 ATSIIAGDIARF-----PLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQ 118 (406) Q Consensus 44 ~i~~ia~~ia~~-----~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~ 118 (406) ||+.|++.+.-+ |+.+.-.+.+ ....+...++. .++...--..++..|.+.|..|..++.+...+-+.+ T Consensus 83 AideIvneaiv~d~~~~pV~v~l~~~e--~s~~iK~kI~~----lldf~~~~~~~fR~WYVDGriy~Hkiik~~k~GI~e 156 (533) T protein:vir:58 83 VLDIIADECTIPNENGNIVDVVTKDIE--LAKAILSYLDY----VINIEKNAYPIIRNMIKYGDMFLHILEKGSDGTIEK 156 (533) T ss_pred HHHhhhceeeEecCCCceeEeeccccc--ccHHHHHHHHH----HhcchhhhhHHHHhhhhcceeEEEeccCCcccchhh Confidence 999999887654 3444322222 12222222221 233334445567788899999988876545566889 Q ss_pred EeecCCeeEEEEEccCcceEEEEEe------ecCCeEEEEcceeeEeecc--CCCCCccccCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 119 FQFYRPSETTVEETDNHEIVYTFTD------MLTAKQVKCFAHDVIHWKF--FSHDTILGRSPLLSLGDEIDLQTGGINT 190 (406) Q Consensus 119 l~~l~p~~~~~~~~~~g~~~~~~~~------~~~g~~~~~~~~~vih~r~--~~~~~~~G~s~~~~~~~~i~~~~~~~~~ 190 (406) |..|+|..++.++......-|+++. ...+..+.++.+.|+|+.. ...++.+++|-+..+...+....-+... T Consensus 157 lr~lDPr~i~~vr~~~t~~eyyvy~~~~~~~~s~~~~~kI~~daI~y~~SGl~d~~~~~iisyLhkAiKp~NQLkmiEDA 236 (533) T protein:vir:58 157 FQVVSPYIFSKRYNPETDTWYYVITDVYRNVVSGYFNEDIPEEDVIHFSHKIDTNFFPYGRSYLESARAIWNQLRLMEDA 236 (533) T ss_pred heecCCeeeEEEEeeccceEEEeecccccccccCccccccchhheeeeeeccccCCCCceehhhhHHHHHHHHHHHHHHH Confidence 9999999998887765544443332 1233457889999999874 3445678889999987777766666655 Q ss_pred HHHHHhcCCCcceEE-eecCCCCH----HHHHHHHHHHHHHhccc-ccCce----------eec----------cCCcee Q lcl|Aclame:pro 191 LIKFFKDGFSSGILT-MKGAQLSG----DARQRARQEFEKMREGS-VGGSP----------LVF----------DSTMEY 244 (406) Q Consensus 191 ~~~~~~ng~~~~~~~-~~~~~~~~----e~~~~~~~~~~~~~~g~-~~~~~----------~vl----------~~g~~~ 244 (406) ..-+-=..++-+-++ .-.+.+-+ +-+..+..++++.+-=+ +.|.+ ..+ ..|.++ T Consensus 237 lVIYRisRAPeRRvFYIDVGNlpk~KAeqYl~~im~k~kNklvYDa~TGev~ddrk~m~~~sMlEDyWLpRReGgrgTEI 316 (533) T protein:vir:58 237 LMLYRVVRSVDRRVFYVDVGNVPPDKINEYLTNIAMQYKRDYWVRNNQNQFLGIDNYFSIESILKDYFIPRRGDRRAVEI 316 (533) T ss_pred HHHHhhcCChhheEEEEeecCCCccCHHHHHHHHHHhcccceEEeccCCeEeeccchhhhhhhHhhhcccccCCCcccee Confidence 554432333333233 22222222 22344444444444111 11111 112 246778 Q ss_pred eeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccch-hHH-HHHHHHHHHHHHHHHHHHHHHHHhhccCccc--h Q lcl|Aclame:pro 245 TPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQ-SVA-QLMEDYVTNDLPFYFDAITSELGLKTLNDKD--R 320 (406) Q Consensus 245 ~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~-n~~-~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~--~ 320 (406) +.|.-. . +.-++-.++..+.+.++++||.+-|+..+... ..+ ...+.=++..|.-+-..+.+.|...|..... . T Consensus 317 ~TLpGg-~-lgemeDV~YF~kkLy~ALnVP~sRl~~e~~fgr~~eItRDEiKF~KFI~rLR~rF~~ll~~qLilk~iit~ 394 (533) T protein:vir:58 317 DILQGS-K-VDLAEDVEYMLNRLISALKVPKAFIGYEGDVNAKNTLATQDIKFNNTIKRIQGFFVEELERMVRMNKEFAD 394 (533) T ss_pred eecCCC-C-CCcHHHHHHHHHHHHHHhCCCeeecCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHhcccccccCcch Confidence 887642 2 55667778888999999999999997644332 111 1122225667777888888888887765432 1 Q ss_pred hhhhhhhcccc---------hhHHHHHHHHHH--------HhCCC--cCHHHHH------HHhCCC---CCCCCCCCeee Q lcl|Aclame:pro 321 RLYHIEFDTRS---------VTGRNVDEIVKL--------VNNQI--LTPNQGL------VELGKQ---KSTDPNMDRYQ 372 (406) Q Consensus 321 ~~~~~~~~~~~---------~~~~~~~~~~~~--------~~~g~--~t~NE~R------~~~g~~---p~~~~~gd~~~ 372 (406) ..|.+.|..+. .+..|+..+..+ +...+ +| +|+. +..+.. +-++.+++ . T Consensus 395 eew~~~f~~Dn~f~ElKe~Eil~~Ri~~l~~~dpyvgk~yi~k~ILr~t-dei~~q~e~ie~E~~~~~~~~~~~~~e--~ 471 (533) T protein:vir:58 395 QDFRLVMNRSNSIVEGERFAVIEQRIGIAERLKGWVREDWIYSNILQIP-YDLKPQEEVAEAAGGGGLFDTGGFGEE--T 471 (533) T ss_pred hheeeeeeccchHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHhcCC-hhhhHHHHHHHHhhcCCCCCCCCcccc--c Confidence 22334443221 233344433221 11111 23 2322 222111 11111221 1 Q ss_pred eccCcc-----chhhcc----ccccccCcccCCCccC------------CCCCCC Q lcl|Aclame:pro 373 SSLNYV-----FLDKKE----EYQDKVGIKGKGGEVN------------AEEDKS 406 (406) Q Consensus 373 ~~~n~~-----~~~~~~----~~~~~~~~~~~gg~~~------------~~~~~~ 406 (406) .|.-.. |++... .......++.-||+.| +..++- T Consensus 472 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~g~~~~~ 526 (533) T protein:vir:58 472 TPADFLGERGSPIESPRGRTEFDFGTEGGEELGGELNLGGAFEEFEEETGGGEEE 526 (533) T ss_pred CCcccCccccCcccCCCChhhHhcccCCcccccccccccccchhhhhhcCCcccC Confidence 222111 221110 0000001111111111 111111 No 157 >protein:vir:4898 Length: 502 # NCBI annotation: gp502 # Family: family:all:125 # MgeID: mge:107 # MgeName: Sfi11 # Cross-refs: genbank:acc:NP_056676;genbank:gi:9635011;genbank:GeneID:1262662 Probab=98.47 E-value=5.2e-07 Score=55.05 Aligned_cols=394 Identities=12% Similarity=0.020 Sum_probs=179.5 Q ss_pred CcccccccCC---------------CCcchhhHHHhhcCCcccccc---------hhhhhccHHHHHHHHHHHHhhccce Q lcl|Aclame:pro 1 MSFFQPLGTS---------------KVSYDDYISSVLAGDVSQKYL---------GVSALKNSDILTATSIIAGDIARFP 56 (406) Q Consensus 1 M~~f~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~---------~~~a~~~~~v~~~i~~ia~~ia~~~ 56 (406) |..+...... ..+.-..+..+..|....... +..-....-....|+..+.-+-.-| T Consensus 31 ~~~~~~~~~~~~~~i~~~i~~h~~~~~~rl~~l~~yY~g~~~~i~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~g~p 110 (502) T protein:vir:48 31 ADNLEELMVNNWELLKNFINHHKLRQAPRIQELLDYARGENHDVLKSGRRKDNEMADKRAVHNYGRMISKFKTGYLAGNP 110 (502) T ss_pred ccchhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccccceeecchHHHHHHHHhhhhcccC Confidence 2111111100 000001112222221110000 0001112223345566666666667 Q ss_pred eEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccC-- Q lcl|Aclame:pro 57 LVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN-- 134 (406) Q Consensus 57 ~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~-- 134 (406) +.+.-.+.. ....+...|. +....-........+..+++.+|.+|.++.++. +|.+ .+..++|..+.+.+++. T Consensus 111 ~~~~~~d~~--~~~~~~~~l~-~~~~~N~~~~~~~~~~~~~~~~G~a~~~v~~de-dg~~-~i~~~~p~~~~~vydd~~~ 185 (502) T protein:vir:48 111 IRVEYDDNE--DNSQNDDAIK-RIGRINDIDTHNRNLIRDLSQTGRAYEVIYRSE-YDET-RIKRLSPLETFVIYDNSLE 185 (502) T ss_pred eeEecCCcc--chhHHHHHHH-HHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCC-CCce-EEEEEcccceEEEEcCCCC Confidence 766433322 1223333332 333334556788889999999999999888874 4554 46778888888877653 Q ss_pred cceEEE----EEee-cCCeE--EEEcceeeEeeccC-----------C---------CCCccccCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 HEIVYT----FTDM-LTAKQ--VKCFAHDVIHWKFF-----------S---------HDTILGRSPLLSLGDEIDLQTGG 187 (406) Q Consensus 135 g~~~~~----~~~~-~~g~~--~~~~~~~vih~r~~-----------~---------~~~~~G~s~~~~~~~~i~~~~~~ 187 (406) +.+... .... .++.. ..+.++.++++... + .+...|.|.++.+...++....+ T Consensus 186 ~~~~~~ir~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~d~~ 265 (502) T protein:vir:48 186 DNSIAAVRYYNRGTLQNAKDVVEIYTNQHIYTLDASDSFNEISVTPHAFGTVPITEFLNNADGIGDYETELYLIDLYDSA 265 (502) T ss_pred CceEEEEEEEEEeecCCcEEEEEEEeCCeEEEEEeCCceeeccceecCCCccceEEecCCCCCCCchhhhHHHHHHHHHH Confidence 333221 1111 11111 12344444443311 0 11235888888888888877777 Q ss_pred HHHHHHHHhcCCCcceEEeecCCCCH-HHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHH Q lcl|Aclame:pro 188 INTLIKFFKDGFSSGILTMKGAQLSG-DARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQ 266 (406) Q Consensus 188 ~~~~~~~~~ng~~~~~~~~~~~~~~~-e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~ 266 (406) .....+.++....|-.++........ +....+++. ...... ..+.......+.+++-++.......+....+...+. T Consensus 266 ~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~L~~~ 343 (502) T protein:vir:48 266 ESDTANHMSDMADAILAIYGDLALPQGMQASDMKRT-RLMQLK-PPKSADGKEGTVKAEYLTKSYDVSGAEAYKTRLNKD 343 (502) T ss_pred HHHHHHHHHHhcCceeeeecCcccccccchhhhhhc-ceeecc-ccccccccccCcceeEeeecCCHHHHHHHHHHHHHH Confidence 77677777776767666554332221 222211111 100100 000011123455666666554445556667888889 Q ss_pred HHHHhcCCHHHhcc-cccchhH------------HHHHHHHHHHHHHHHHHHHHHHHHhhccC-ccchhhhhhhhc--cc Q lcl|Aclame:pro 267 IAKALRVPSYKLGV-NSPNQSV------------AQLMEDYVTNDLPFYFDAITSELGLKTLN-DKDRRLYHIEFD--TR 330 (406) Q Consensus 267 Ia~~fgvpp~~lg~-~~~~~n~------------~~~~~~~~~~~i~P~~~~ie~~l~~~l~~-~~~~~~~~~~~~--~~ 330 (406) |+..-++|+...+. .++-|.. ....+..+...|.-+++.|...+...--. ..+...+.+.|. .. T Consensus 344 I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~i~f~~~~p 423 (502) T protein:vir:48 344 IHVFTNTPDMSDNHFSGNASGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFKDFDESRLKITFTPNLP 423 (502) T ss_pred HHHHhCCCCcCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccceEEeCCCCC Confidence 99999999765543 2221111 22333555666666666666655432211 112222334442 34 Q ss_pred chhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCccc-CCCcc--CCCCCCC Q lcl|Aclame:pro 331 SVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKG-KGGEV--NAEEDKS 406 (406) Q Consensus 331 ~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~-~gg~~--~~~~~~~ 406 (406) .+..+.++.+.++ .|+++..-+.+++++-.-+.....++..-. ...+... .+....... .|+++ ++..++. T Consensus 424 ~d~~e~a~~~~kl--~g~iS~et~l~~l~~v~D~~~E~~ri~~E~--~~~~~~~-~~~~~~~~~~~~~d~~~e~~~~~~ 497 (502) T protein:vir:48 424 KSLYEQVSILNDL--GGQVSQETALSLSGLVENPTEELDKINEES--SKIDFKG-YPSYFYDNVGKYTDEVKETHTDDF 497 (502) T ss_pred cCHHHHHHHHHHH--hccCcHHHHHHhCCCCCCHHHHHHHHHHHH--Hhhhhhc-ccccccccccccCCCccCCCCcCc Confidence 4566777777776 478998888888754221111111111000 0000000 000111111 11111 1111111 No 158 >protein:vir:94101 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1494 # MgeName: 96 # Cross-refs: genbank:acc:YP_240229;genbank:gi:66395892;genbank:GeneID:5133270 Probab=98.47 E-value=5.3e-07 Score=54.97 Aligned_cols=379 Identities=13% Similarity=0.077 Sum_probs=180.2 Q ss_pred CcccccccCCCC--------------------cchhhHHHhhc---------------CCcc---c--ccchhhhhccHH Q lcl|Aclame:pro 1 MSFFQPLGTSKV--------------------SYDDYISSVLA---------------GDVS---Q--KYLGVSALKNSD 40 (406) Q Consensus 1 M~~f~~~~~~~~--------------------~~~~~~~~~~~---------------~~~~---~--~~~~~~a~~~~~ 40 (406) |-++....-... ....+...... .... . ...+..-+.++- T Consensus 4 ~~~~~~~~~~~~~~e~i~~~i~~~~~~~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~n~ 83 (474) T protein:vir:94 4 YKLIDDIEAQGILPKHIEALIESHKDDRERMVNLYNRYKTHIDYVPIFKRRPIEEKEDFETGGNVRRLDVSVNNKLNNSF 83 (474) T ss_pred HHHHhhccccCCCHHHHHHHHHHhhhhhHHHHHHHHHHhhhcchhhhhcchhhhhhhhhhhcccccccccCcccccccch Confidence 222211100000 00000000000 0000 0 000011122333 Q ss_pred HHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEe Q lcl|Aclame:pro 41 ILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQ 120 (406) Q Consensus 41 v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~ 120 (406) ....|+..+.-+-.-|+.+.-.+ .......+...|. +-............+....+.+|.||.++..+ .+|++ .+. T Consensus 84 ~~~ivd~~~~yl~g~pv~~~~~~-~~~~~e~~~~~l~-~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d-~~~~~-~~~ 159 (474) T protein:vir:94 84 DSEIVDTRVGYLHGVPVTYDLDE-NAEKNEKLKKFIT-NFAIRNSVDDEDSEIGKMAAICGYGARLAYID-TNGDI-RIK 159 (474) T ss_pred HHHHHHhHhhheeccceeEeeCC-CCcchHHHHHHHH-HHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeC-CCCee-EEE Confidence 44556666666666677653222 1122222333332 22222345567788889999999999988776 44554 577 Q ss_pred ecCCeeEEEEEccCcceEEEE----E-eecCCeE---E-EEcceeeEeeccCC----------------------CCCcc Q lcl|Aclame:pro 121 FYRPSETTVEETDNHEIVYTF----T-DMLTAKQ---V-KCFAHDVIHWKFFS----------------------HDTIL 169 (406) Q Consensus 121 ~l~p~~~~~~~~~~g~~~~~~----~-~~~~g~~---~-~~~~~~vih~r~~~----------------------~~~~~ 169 (406) .++|..+.+.+++.+...+.+ . ....+.. . .+....+++++... .+... T Consensus 160 ~i~p~~~~~v~d~~~~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~ 239 (474) T protein:vir:94 160 NIDPYNVIFVGDNILEPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPLFGVPNNKE 239 (474) T ss_pred EEcccceEEEEcCCCceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccceEEecCCCC Confidence 888988888877766543221 1 1112211 1 12233333332110 01234 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccC Q lcl|Aclame:pro 170 GRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEI 249 (406) Q Consensus 170 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~ 249 (406) |.|-++.+...++..+.+.....+.+...+.|-.+++. ...+++.....+ ..+.+.+.+.+.+++-+.. T Consensus 240 g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~l~i~g-~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~l~~ 308 (474) T protein:vir:94 240 MIGDAEKVIHLIDAYDLTMSDASSEISQTRLAYLVLRG-MGMSEEMIQETQ----------KSGAFELFDKDMDVKYLTK 308 (474) T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhcc-CCCCchhhhhhh----------hcceeEecCCCCceeEEec Confidence 77777777777776666655555555555556555543 333433332221 1233555677777777766 Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCCHHHhc-ccccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 250 DTNVLQLITSNNFSTAQIAKALRVPSYKLG-VNSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLN 316 (406) Q Consensus 250 ~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg-~~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~ 316 (406) ......+....+...+.|+..-++|..-.+ ..++-|. .....+..+..+|.-.++.|...++.+-.. T Consensus 309 ~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~l~~~~~~ 388 (474) T protein:vir:94 309 DVNDTMIENHLDRIEKNIMRFAKSVNFNSDEFNGNVPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVILSALKRKGYN 388 (474) T ss_pred cCCHHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC Confidence 555566677788888899999999875543 2222111 123334566666777777776666543222 Q ss_pred c--cchhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcc-ccccccC Q lcl|Aclame:pro 317 D--KDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE-EYQDKVG 391 (406) Q Consensus 317 ~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~-~~~~~~~ 391 (406) . .+...+.+.|. +..+..+.++.+.++ .|+++..-+.+++++-+-+....++ +.... +...... T Consensus 389 ~~~~~~~~i~~~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v~d~~~E~er---------i~~E~~e~~~~~~ 457 (474) T protein:vir:94 389 LDDDSYLNLIFKFTRNIPVNKLEESQVLINL--KGQVSERTRLGQSQLVDDVDYELDE---------MEKESLEFNDKLP 457 (474) T ss_pred CCccccccceEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHH---------HHHHHHHHHhhcc Confidence 1 12222334443 344566777777776 4899998888887543211111111 11000 0011111 Q ss_pred cccCCCccCCC--CCCC Q lcl|Aclame:pro 392 IKGKGGEVNAE--EDKS 406 (406) Q Consensus 392 ~~~~gg~~~~~--~~~~ 406 (406) ...+++.+++ .++| T Consensus 458 -~~~~~~~~~~~~~~~s 473 (474) T protein:vir:94 458 -DIDEGDANDKSQNNQS 473 (474) T ss_pred -cccCCCcCCCCccccC Confidence 1111222222 2222 No 159 >protein:vir:105889 Length: 474 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1514 # MgeName: phiETA3 # Cross-refs: genbank:acc:YP_001004371;genbank:gi:122891826;genbank:GeneID:4712360 Probab=98.47 E-value=5.3e-07 Score=54.97 Aligned_cols=379 Identities=13% Similarity=0.077 Sum_probs=180.2 Q ss_pred CcccccccCCCC--------------------cchhhHHHhhc---------------CCcc---c--ccchhhhhccHH Q lcl|Aclame:pro 1 MSFFQPLGTSKV--------------------SYDDYISSVLA---------------GDVS---Q--KYLGVSALKNSD 40 (406) Q Consensus 1 M~~f~~~~~~~~--------------------~~~~~~~~~~~---------------~~~~---~--~~~~~~a~~~~~ 40 (406) |-++....-... ....+...... .... . ...+..-+.++- T Consensus 4 ~~~~~~~~~~~~~~e~i~~~i~~~~~~~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~n~ 83 (474) T protein:vir:10 4 YKLIDDIEAQGILPKHIEALIESHKDDRERMVNLYNRYKTHIDYVPIFKRRPIEEKEDFETGGNVRRLDVSVNNKLNNSF 83 (474) T ss_pred HHHHhhccccCCCHHHHHHHHHHhhhhhHHHHHHHHHHhhhcchhhhhcchhhhhhhhhhhcccccccccCcccccccch Confidence 222211100000 00000000000 0000 0 000011122333 Q ss_pred HHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEe Q lcl|Aclame:pro 41 ILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQ 120 (406) Q Consensus 41 v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~ 120 (406) ....|+..+.-+-.-|+.+.-.+ .......+...|. +-............+....+.+|.||.++..+ .+|++ .+. T Consensus 84 ~~~ivd~~~~yl~g~pv~~~~~~-~~~~~e~~~~~l~-~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d-~~~~~-~~~ 159 (474) T protein:vir:10 84 DSEIVDTRVGYLHGVPVTYDLDE-NAEKNEKLKKFIT-NFAIRNSVDDEDSEIGKMAAICGYGARLAYID-TNGDI-RIK 159 (474) T ss_pred HHHHHHhHhhheeccceeEeeCC-CCcchHHHHHHHH-HHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeC-CCCee-EEE Confidence 44556666666666677653222 1122222333332 22222345567788889999999999988776 44554 577 Q ss_pred ecCCeeEEEEEccCcceEEEE----E-eecCCeE---E-EEcceeeEeeccCC----------------------CCCcc Q lcl|Aclame:pro 121 FYRPSETTVEETDNHEIVYTF----T-DMLTAKQ---V-KCFAHDVIHWKFFS----------------------HDTIL 169 (406) Q Consensus 121 ~l~p~~~~~~~~~~g~~~~~~----~-~~~~g~~---~-~~~~~~vih~r~~~----------------------~~~~~ 169 (406) .++|..+.+.+++.+...+.+ . ....+.. . .+....+++++... .+... T Consensus 160 ~i~p~~~~~v~d~~~~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~ 239 (474) T protein:vir:10 160 NIDPYNVIFVGDNILEPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPLFGVPNNKE 239 (474) T ss_pred EEcccceEEEEcCCCceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccceEEecCCCC Confidence 888988888877766543221 1 1112211 1 12233333332110 01234 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccC Q lcl|Aclame:pro 170 GRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEI 249 (406) Q Consensus 170 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~ 249 (406) |.|-++.+...++..+.+.....+.+...+.|-.+++. ...+++.....+ ..+.+.+.+.+.+++-+.. T Consensus 240 g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~l~i~g-~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~l~~ 308 (474) T protein:vir:10 240 MIGDAEKVIHLIDAYDLTMSDASSEISQTRLAYLVLRG-MGMSEEMIQETQ----------KSGAFELFDKDMDVKYLTK 308 (474) T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhcc-CCCCchhhhhhh----------hcceeEecCCCCceeEEec Confidence 77777777777776666655555555555556555543 333433332221 1233555677777777766 Q ss_pred ChhHHHHHHHHHHHHHHHHHHhcCCHHHhc-ccccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 250 DTNVLQLITSNNFSTAQIAKALRVPSYKLG-VNSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLN 316 (406) Q Consensus 250 ~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg-~~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~ 316 (406) ......+....+...+.|+..-++|..-.+ ..++-|. .....+..+..+|.-.++.|...++.+-.. T Consensus 309 ~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~l~~~~~~ 388 (474) T protein:vir:10 309 DVNDTMIENHLDRIEKNIMRFAKSVNFNSDEFNGNVPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVILSALKRKGYN 388 (474) T ss_pred cCCHHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC Confidence 555566677788888899999999875543 2222111 123334566666777777776666543222 Q ss_pred c--cchhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcc-ccccccC Q lcl|Aclame:pro 317 D--KDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE-EYQDKVG 391 (406) Q Consensus 317 ~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~-~~~~~~~ 391 (406) . .+...+.+.|. +..+..+.++.+.++ .|+++..-+.+++++-+-+....++ +.... +...... T Consensus 389 ~~~~~~~~i~~~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v~d~~~E~er---------i~~E~~e~~~~~~ 457 (474) T protein:vir:10 389 LDDDSYLNLIFKFTRNIPVNKLEESQVLINL--KGQVSERTRLGQSQLVDDVDYELDE---------MEKESLEFNDKLP 457 (474) T ss_pred CCccccccceEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHH---------HHHHHHHHHhhcc Confidence 1 12222334443 344566777777776 4899998888887543211111111 11000 0011111 Q ss_pred cccCCCccCCC--CCCC Q lcl|Aclame:pro 392 IKGKGGEVNAE--EDKS 406 (406) Q Consensus 392 ~~~~gg~~~~~--~~~~ 406 (406) ...+++.+++ .++| T Consensus 458 -~~~~~~~~~~~~~~~s 473 (474) T protein:vir:10 458 -DIDEGDANDKSQNNQS 473 (474) T ss_pred -cccCCCcCCCCccccC Confidence 1111222222 2222 No 160 >protein:vir:5961 Length: 503 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690661;genbank:geneid:6329220;genbank:gi:22855055;interpro:IPR006428;uniprot:P54309;genbank:GeneID:955279 Probab=98.46 E-value=5.5e-07 Score=54.90 Aligned_cols=381 Identities=11% Similarity=0.022 Sum_probs=172.0 Q ss_pred Ccc----ccccc-CCCCcchhhHHHhhcCCcc-----------------cccchhhhhccHHHHHHHHHHHHhhccceeE Q lcl|Aclame:pro 1 MSF----FQPLG-TSKVSYDDYISSVLAGDVS-----------------QKYLGVSALKNSDILTATSIIAGDIARFPLV 58 (406) Q Consensus 1 M~~----f~~~~-~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~ 58 (406) +.. .+++- ......-..+.....|... ....+..-+.++-...+|+..+.-+-.-|+. T Consensus 27 ~~~~~~~i~~~i~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~~~~ri~~n~~~~ivd~~~~yl~g~~~~ 106 (503) T protein:vir:59 27 AEPDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLFVDQKTQYLVGEPVT 106 (503) T ss_pred cchhHHHHHHHHHhhcHHHHHHHHHHhccccchhhccchhcccccccccccccccceeecchHHHHHHHHHhhhhcCCee Confidence 111 11100 0000000111111111100 0000001112333455677777777666776 Q ss_pred EEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccC--cc Q lcl|Aclame:pro 59 KKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN--HE 136 (406) Q Consensus 59 ~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~--g~ 136 (406) +...+ +. ....+.. +.. | ........++.+.+.+|.+|.++..+. +|++. +..++|..+.+.+++. +. T Consensus 107 ~~~~d-~~-~~~~l~~-~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~-dg~~~-i~~~~p~~~~~i~d~~~~~~ 176 (503) T protein:vir:59 107 FTSDN-KT-LLEYVNE-LAD--D---DFDDILNETVKNMSNKGIEYWHPFVDE-EGEFD-YVIFPAEEMIVVYKDNTRRD 176 (503) T ss_pred eccCc-HH-HHHHHHH-HHh--c---CHHHHHHHHHHHHhhCCeEEEEEeecC-CCceE-EEEEccceeEEEEeCCCCCc Confidence 53222 11 1111222 221 2 455677778999999999999988874 46654 7888998888877654 22 Q ss_pred eEE----EEEeecCCeE----EEEcceeeEeeccC-------------------------------C----CCCccccCH Q lcl|Aclame:pro 137 IVY----TFTDMLTAKQ----VKCFAHDVIHWKFF-------------------------------S----HDTILGRSP 173 (406) Q Consensus 137 ~~~----~~~~~~~g~~----~~~~~~~vih~r~~-------------------------------~----~~~~~G~s~ 173 (406) +.. +......+.. ..+.+..+.+++.. | .+...|.|. T Consensus 177 ~~~~ir~~~~~~~~~~~~~~~evy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPiv~~~nn~~~~sd 256 (503) T protein:vir:59 177 ILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIPFKNNEEMVSD 256 (503) T ss_pred eEEEEEEEEEecCCCceEEEEEEEeCCcEEEEEEcCCcccccccccccccccceeecceeccCCccceEEecCCCCCCcc Confidence 221 1111112211 12333333332210 0 122357888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhH Q lcl|Aclame:pro 174 LLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNV 253 (406) Q Consensus 174 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d 253 (406) +..+...++..+.+.....+.++..+.|-.++....... .+.....+. ..+++.++++.+++.+...... T Consensus 257 ~~~~~~liDa~d~~~s~~~~~~~~~~~~~~v~~g~~~~~---~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~ 326 (503) T protein:vir:59 257 LKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGEN---PKEFTANLR-------YHSVIKVSGDGGVDTLRAEIPV 326 (503) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCCeeEeecCCccc---cchhhhhhh-------cccceeccCCCcceeEeccCCH Confidence 888888887766666555555666666765554322211 111111111 1234555665555555444444 Q ss_pred HHHHHHHHHHHHHHHHHhcCC---HHHhcccccchhH----------HHHHHHHHHHHHHHHHHHHHHHHHhhccCc-cc Q lcl|Aclame:pro 254 LQLITSNNFSTAQIAKALRVP---SYKLGVNSPNQSV----------AQLMEDYVTNDLPFYFDAITSELGLKTLND-KD 319 (406) Q Consensus 254 ~~~~e~~~~~~~~Ia~~fgvp---p~~lg~~~~~~n~----------~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~-~~ 319 (406) ..+....+...+.|+..-++| +..++...++... .+..+..+...|.-+++.|...+...-... .+ T Consensus 327 ~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~~~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~ 406 (503) T protein:vir:59 327 DSAAKELERIQDELYKSAQAVDNSPETIGGGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYLRNTGKGDFNP 406 (503) T ss_pred HHHHHHHHHHHHHHHHHhcccCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccc Confidence 444455555555565555554 3334332222211 233445556666666666666655322211 11 Q ss_pred hhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcc---- Q lcl|Aclame:pro 320 RRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIK---- 393 (406) Q Consensus 320 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~---- 393 (406) ...+.+.| ....+..+.++.+.+++.+|+++...+.++++.-+-+.....++-.-. +...+.+...... T Consensus 407 ~~~i~i~f~~~~p~d~~~~~~~~~kl~~~GiiS~et~l~~l~~v~d~~~E~~ri~~E~-----~~~~~~~~~~~~~~~~~ 481 (503) T protein:vir:59 407 DKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEM-----NQYAEMQGNLLDDEGGD 481 (503) T ss_pred ccceeEEeCCCCCCCHHHHHHHHHHHHhCCCCchHHHHHhCCCCCCHHHHHHHHHHHH-----HHHHhhhccccCccCCC Confidence 12233444 345577788999999999999999988888755321111111110000 0000000000011 Q ss_pred --------cCCCccCCCCCCC Q lcl|Aclame:pro 394 --------GKGGEVNAEEDKS 406 (406) Q Consensus 394 --------~~gg~~~~~~~~~ 406 (406) ..++++++.+++- T Consensus 482 ~~~~~~~~~~~~~~~~~~g~~ 502 (503) T protein:vir:59 482 DDLEEDDPNAGAAESGGAGQV 502 (503) T ss_pred CCCCcCCCCCCcccCCCCCCc Confidence 1111111111111 No 161 >protein:vir:2341 Length: 488 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:51 # MgeName: Bxb1 # Cross-refs: genbank:acc:NP_075278;genbank:gi:12657865;genbank:GeneID:920078 Probab=98.42 E-value=4.8e-07 Score=55.23 Aligned_cols=392 Identities=11% Similarity=0.029 Sum_probs=154.8 Q ss_pred Cc---------ccccccC---CCCcchhhHHHhhcCCcc-----cccchhhh---hccHHHHHHHHHHHHhhccceeEEE Q lcl|Aclame:pro 1 MS---------FFQPLGT---SKVSYDDYISSVLAGDVS-----QKYLGVSA---LKNSDILTATSIIAGDIARFPLVKK 60 (406) Q Consensus 1 M~---------~f~~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~~~a---~~~~~v~~~i~~ia~~ia~~~~~~~ 60 (406) |. +.+.+.. ...+.-..+..+..|... ....+... ....-...+|+.++..+---.|.+- T Consensus 1 ~~~~~~~d~~~~i~~L~~~~~~~~~r~~~~~~Yy~g~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~a~~l~~~Gf~~~ 80 (488) T protein:vir:23 1 MAETESIDPEKLRDQLLDAFENKQNELKSSKAYYDAERRPDAIGLAVPLDMRKYLAHVGYPRTYVDAIAERQELEGFRIP 80 (488) T ss_pred CCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhcCcccchhhhhhhhhcchHHHHHHHHHHhhhccceecc Confidence 11 1100000 000000011111111110 00111100 0111122334444432222233332 Q ss_pred ecC-------CcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC-------CceeEEEeecCCee Q lcl|Aclame:pro 61 DVN-------GDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK-------TNQALQFQFYRPSE 126 (406) Q Consensus 61 ~~~-------~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~-------~g~~~~l~~l~p~~ 126 (406) ... ++......+..++. -| ........+..+.+.+|.||.++..+.. .+.+ .+..++|.. T Consensus 81 ~~~~~~~~~~~d~~~~~~l~~i~~--~N---~~~~~~~~~~~~a~i~G~a~~~v~~~~~~~~~~~~~~~~-~i~~~~p~~ 154 (488) T protein:vir:23 81 SANGEEPESGGENDPASELWDWWQ--AN---NLDIEATLGHTDALIYGTAYITISMPDPEVDFDVDPEVP-LIRVEPPTA 154 (488) T ss_pred CCcccccccccchhHHHHHHHHHH--hc---ChhHHHHHHHHHHhhcCceEEEEecCCcccccCCCCCcc-eEEEeccce Confidence 111 11111122333332 12 3456777888999999999988765421 1222 356778887 Q ss_pred EEEEEccC-cceEEE--EEe-ecCCeE---EEEccee-------------------------eEeeccCC-CCCccccCH Q lcl|Aclame:pro 127 TTVEETDN-HEIVYT--FTD-MLTAKQ---VKCFAHD-------------------------VIHWKFFS-HDTILGRSP 173 (406) Q Consensus 127 ~~~~~~~~-g~~~~~--~~~-~~~g~~---~~~~~~~-------------------------vih~r~~~-~~~~~G~s~ 173 (406) +.+.++.. +.+.+. +.. ..++.. ..+.++. |++|++++ ..+++|.|- T Consensus 155 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~~G~s~ 234 (488) T protein:vir:23 155 LYAEVDPRTRKVLYAIRAIYGADGNEIVSATLYLPDTTMTWLRAEGEWEAPTSTPHGLEMVPVIPISNRTRLSDLYGTSE 234 (488) T ss_pred eEEEEecCCCceEEEEEEEEecCCCcEEEEEEEecCcEEEEEecCCceEeccccccCCCCcceEEeccccccCCcCCccc Confidence 77766533 222111 111 111111 0112222 45555433 234577776 Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHH--HHHHHHHHHHhcccccCceeeccCC--ceeeecc Q lcl|Aclame:pro 174 LLS-LGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDAR--QRARQEFEKMREGSVGGSPLVFDST--MEYTPLE 248 (406) Q Consensus 174 ~~~-~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~--~~~~~~~~~~~~g~~~~~~~vl~~g--~~~~~l~ 248 (406) +.- +...++..+...........-.+.|..+++. ....+... +.-...|+.. .++++.++.| .++.++. T Consensus 235 i~~~v~~l~Da~~~~~s~~~~~~~~~a~p~~~i~G-~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~g~~~~~~q~~ 308 (488) T protein:vir:23 235 ISPELRSVTDAAAQILMNMQGTANLMAIPQRLIFG-AKPEELGINAETGQRMFDAY-----MARILAFEGGEGAHAEQFS 308 (488) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhC-CCcccccccccccchhhhhh-----hhhhccCCCCCCceeEecC Confidence 542 2233333332222222222222234333321 11111000 0001111111 1335555554 5676665 Q ss_pred CChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccc-hhHH-------------HHHHHHHHHHHHHHHHHHHHHHHhhc Q lcl|Aclame:pro 249 IDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPN-QSVA-------------QLMEDYVTNDLPFYFDAITSELGLKT 314 (406) Q Consensus 249 ~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~-~n~~-------------~~~~~~~~~~i~P~~~~ie~~l~~~l 314 (406) .... ..+++..+..+.+|+..=++|+..+|....+ ++.+ +..+..+...|.-+++.+...++..- T Consensus 309 ~~~~-~~~~~~l~~~i~~~~~~~~~p~~~~g~~~~n~~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~~~~~ 387 (488) T protein:vir:23 309 AAEL-RNFVDALDALDRKAASYSGLPPQYLSSSSDNPASAEAIKAAESRLVKKVERKNKIFGGAWEQAMRLAYKMVKGGD 387 (488) T ss_pred CCCh-HHHHHHHHHHHHHHhcccCCCHHHhccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC Confidence 5432 3477888888899999999999999865432 1111 12222233333333333322222100 Q ss_pred cCccchhhhhhhhc--ccchhHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCCCCCCCeeeeccCcc---chhhcc--c Q lcl|Aclame:pro 315 LNDKDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQ--ILTPNQGLVELGKQKSTDPNMDRYQSSLNYV---FLDKKE--E 385 (406) Q Consensus 315 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g--~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~---~~~~~~--~ 385 (406) . ..+...+.+.|. ...+..+.++++.+++++| +++..-+++++|+-+-+.+..++..-..... -++... . T Consensus 388 ~-~~~~~~i~v~f~~~~~~s~~~~ada~~kl~~~g~~~~s~et~~~~l~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (488) T protein:vir:23 388 I-PTEYYRMETVWRDPSTPTYAAKADAAAKLFANGAGLIPRERGWVDMGYTIVEREQMRQWLEQDQKQGLGLIGSLYGAS 466 (488) T ss_pred c-chhhccceEEecCCCCCCHHHHHHHHHHHHhcccccCCHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccC Confidence 0 111122333331 2234666778888888865 7888888899987543211111110000000 011000 0 Q ss_pred cccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 386 YQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 386 ~~~~~~~~~~gg~~~~~~~~~ 406 (406) .+....+....|+..++++.. T Consensus 467 ~~~~~~~~~~~~~~~~~e~~~ 487 (488) T protein:vir:23 467 TPEGKPGEAPVGEPPAPEPDA 487 (488) T ss_pred CCcccCCCCCCCCCCCCCCCC Confidence 011112222334444444444 No 162 >protein:vir:78537 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1853 # MgeName: U2 # Cross-refs: genbank:acc:YP_001491582;genbank:gi:157786405;genbank:GeneID:5625689 Probab=98.42 E-value=5.4e-07 Score=54.93 Aligned_cols=387 Identities=10% Similarity=0.035 Sum_probs=158.1 Q ss_pred Ccc----cccccC---CCCcchhhHHHhhcCCcc-----cccchhhh---hccHHHHHHHHHHHHhhccceeEEEecCCc Q lcl|Aclame:pro 1 MSF----FQPLGT---SKVSYDDYISSVLAGDVS-----QKYLGVSA---LKNSDILTATSIIAGDIARFPLVKKDVNGD 65 (406) Q Consensus 1 M~~----f~~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~~~a---~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 65 (406) |+- ...+.. +..+.-..+..+..|... ....+... ....-..-+|+..++.+---.|. ...+ T Consensus 1 ~~t~~d~i~~L~~~~~~~~~r~~~~~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~---~~~d 77 (480) T protein:vir:78 1 MTTYHEHVERLQGLLARDLPNLLEAEAYRNGTRRLKTIGIGAPPELAYLDVQPGWVATYLRTLSDRLDIEGFR---ISED 77 (480) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccccchhhhhhhhhcchHHHHHHHHHhhhccCcee---cCCC Confidence 442 111000 000000111111122110 00111000 00111223344444433222232 2222 Q ss_pred ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecC-----CCceeEEEeecCCeeEEEEEccC--cceE Q lcl|Aclame:pro 66 IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDP-----KTNQALQFQFYRPSETTVEETDN--HEIV 138 (406) Q Consensus 66 ~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~-----~~g~~~~l~~l~p~~~~~~~~~~--g~~~ 138 (406) ......+..+++. | ........+..+.+.+|.||.++.+.. .+|.+ .+..++|..+.+.++.. +.+. T Consensus 78 ~~~~~~l~~i~~~--N---~~~~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~~~~-~i~~~~p~~~~~i~D~~~~~~~~ 151 (480) T protein:vir:78 78 SEGLEELWNWWQA--N---DLDEESVLGHDDSLTFGRAYITVSHPDVESGDPAGIP-LIRVESPLYMYAELDPRNTRRVT 151 (480) T ss_pred chhHHHHHHHHHh--c---CHHHHHHHHHHHHhhcCceEEEeecCccccCCCCCee-EEEEEcccceEEEEcCCCccceE Confidence 2223444555432 2 345667888999999999998876521 33444 47788888888877643 2222 Q ss_pred EEE----EeecCCe---EEEEccee-----------------------------eEeeccCCC-CCccccCHHHH-HHHH Q lcl|Aclame:pro 139 YTF----TDMLTAK---QVKCFAHD-----------------------------VIHWKFFSH-DTILGRSPLLS-LGDE 180 (406) Q Consensus 139 ~~~----~~~~~g~---~~~~~~~~-----------------------------vih~r~~~~-~~~~G~s~~~~-~~~~ 180 (406) +.+ .....+. ...+.++. |+||+++.. .+.+|.|-+.- +... T Consensus 152 ~~i~~~~~~d~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~sdi~~~i~~l 231 (480) T protein:vir:78 152 RAVRLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGRSEISPELRKV 231 (480) T ss_pred EEEEEEEeecCCcceEEEEEEeCCeEEEEEecCCCcccccccccccccCCCCcceEEeecccccCCccCccchhHHHHHH Confidence 211 1111111 01112222 344443322 23567776542 3444 Q ss_pred HHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeecc-CCceeeeccCChhHHHHHHH Q lcl|Aclame:pro 181 IDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFD-STMEYTPLEIDTNVLQLITS 259 (406) Q Consensus 181 i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~-~g~~~~~l~~~~~d~~~~e~ 259 (406) ++..+...........-.+.|..++.. ....+...+.-...|... .+.++.++ ++.++.++.....+ .+++. T Consensus 232 ~Da~~~~~s~~~~~~~~~a~p~~~i~G-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 304 (480) T protein:vir:78 232 TDAASRTLMNLQSASQILGTPLRVISG-VTTDELTNDGENTTLDIY-----YGRILTLASEAAKISEFKAAELR-NFAEE 304 (480) T ss_pred HHHHHHHHHHHHHHHHhhcchhhhhhC-CCccccccccccchhhhh-----hhhhccCCCCCceEEecCccCHH-HHHHH Confidence 444333333333333333345444431 111111111111112211 12233333 45677776654333 36777 Q ss_pred HHHHHHHHHHHhcCCHHHhcccccc-hhHH-------------HHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhh Q lcl|Aclame:pro 260 NNFSTAQIAKALRVPSYKLGVNSPN-QSVA-------------QLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHI 325 (406) Q Consensus 260 ~~~~~~~Ia~~fgvpp~~lg~~~~~-~n~~-------------~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~ 325 (406) .+..+.+|+..=++|+..+|....+ ++.+ +..+..+...|.-.++.+....... . ..+...+.+ T Consensus 305 l~~~i~~~~~~~~~p~~~fg~~~~n~~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~~~~-~-~~~~~~i~v 382 (480) T protein:vir:78 305 MEVFRKEAASITGLPPQYLSSSSENPASAEAIIATDSRIVKMAERKGRIFGGAWERAMRIAMQIMGRE-V-TEEYTRLET 382 (480) T ss_pred HHHHHHHHhcccCCCHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-c-cccceeeeE Confidence 8889999999999999999864332 1111 1111222223333333222211100 0 011112233 Q ss_pred hhc--ccchhHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcccc--ccccCc-ccCCCc Q lcl|Aclame:pro 326 EFD--TRSVTGRNVDEIVKLVNNQ--ILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEY--QDKVGI-KGKGGE 398 (406) Q Consensus 326 ~~~--~~~~~~~~~~~~~~~~~~g--~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~--~~~~~~-~~~gg~ 398 (406) .|. ...+..+.++++.+++.+| +++..-+++++|+.+-+-....+........+++..... +....+ ...+|+ T Consensus 383 ~w~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~lg~~~d~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (480) T protein:vir:78 383 VWRDPSTPTVAAKADAVSKLYANGQGPIPKEQARIDLGYTATQREQMRDWDKQETEDMIDTLYSTTKAQADATPKPTVTE 462 (480) T ss_pred EecCCCCCCHHHHHHHHHHHHHhcccCCCHHHHHhcCCCCHhHHHHHHHHHHHHHHHHHHHhhccccCCCccccCCCCCC Confidence 331 2234566777888888766 677777788888875422111111111122222211110 011111 112222 Q ss_pred cCCCCCCC Q lcl|Aclame:pro 399 VNAEEDKS 406 (406) Q Consensus 399 ~~~~~~~~ 406 (406) .+ ++.++ T Consensus 463 ~~-~~~~~ 469 (480) T protein:vir:78 463 TK-TETQT 469 (480) T ss_pred CC-CccCC Confidence 22 22222 No 163 >protein:vir:9751 Length: 422 # NCBI annotation: putative structural protein # Family: family:all:524 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795513;genbank:gi:28876291;genbank:GeneID:1257832 Probab=98.36 E-value=1.1e-06 Score=53.27 Aligned_cols=349 Identities=9% Similarity=-0.014 Sum_probs=150.5 Q ss_pred Cc---c--cccccCCCCcchhhHHHhhcCCccc-----ccchhhhhccHHHHHHHHH---HHHhhcc-ceeEEEecCCcc Q lcl|Aclame:pro 1 MS---F--FQPLGTSKVSYDDYISSVLAGDVSQ-----KYLGVSALKNSDILTATSI---IAGDIAR-FPLVKKDVNGDI 66 (406) Q Consensus 1 M~---~--f~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~a~~~~~v~~~i~~---ia~~ia~-~~~~~~~~~~~~ 66 (406) |- + +...-....+.-..+..+..|.... .+.+. ++ .....|++. +.+++|. +-+.=++. T Consensus 1 m~~~~i~~L~~~~~~~~~r~~~~~~yy~g~~~~~~~~~~~p~~--~~-~~~~~v~nw~~~~Vd~~a~rl~~~Gf~~---- 73 (422) T protein:vir:97 1 MNYMGMGYLRRKLALFKTGVDKRYRYYAMDDRDDTRSIVMPNN--VR-EMYRSVLEWTAKGVDSLADRIIFREFTN---- 73 (422) T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhcCccccHH--HH-HHHHhhcchhHHHHHHHHhccccceeeC---- Confidence 32 1 1000001111111122222222111 11111 11 011122222 2222222 11211121 Q ss_pred cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceE-E---EEE Q lcl|Aclame:pro 67 IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIV-Y---TFT 142 (406) Q Consensus 67 ~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~-~---~~~ 142 (406) .+..+..++. -|. .......+..+.+++|.||+++..+..+|.| .+.+++|..+...++...+.. . .+. T Consensus 74 -~d~~l~~~w~--~N~---ld~~~~~~~~~al~~G~sf~~v~~~~~~~~p-~i~~~sp~~~~~i~D~~~~~~~~a~~~~~ 146 (422) T protein:vir:97 74 -DDFNAWEIFK--ANN---PDIFFDTAIQSALIASCCFVYIMPGAEDGLP-KMQVIEASKATGILDPTTFLLTEGYAILE 146 (422) T ss_pred -CchhHHHHHH--hcC---hHHHHHHHHHHHHHhcceeEEEeeCCCCCee-EEEEechhhEEEEEeCCCCcceeeEEEEE Confidence 1223444443 233 2345557788889999999999887556776 478889999888776543221 1 111 Q ss_pred eecCCeE--EE-Ecce---------------------eeEeeccCC-CCCccccCHH----HHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 143 DMLTAKQ--VK-CFAH---------------------DVIHWKFFS-HDTILGRSPL----LSLGDEIDLQTGGINTLIK 193 (406) Q Consensus 143 ~~~~g~~--~~-~~~~---------------------~vih~r~~~-~~~~~G~s~~----~~~~~~i~~~~~~~~~~~~ 193 (406) ....|.. .. ++.. -|++|.+.+ ...++|.|.+ ..+.+.+.....-...... T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~I~e~v~~l~da~~r~~~~~~~~~e 226 (422) T protein:vir:97 147 SDSNGNPTLEAYFTDKDIWYYPKKGKPYNIKNPTGHPLLVPIIHRPDAVRPFGRSRITKAGMYHQKAAKRTLERAEVTAE 226 (422) T ss_pred ecCCCcEEEEEEEcCceEEEEcCCCccccccCCCCCcceEEecccCCCccccCccccchhHHHHHHHHHHHHHHHHHHHH Confidence 1222221 11 1111 234444332 2346788754 3333333333333333333 Q ss_pred HHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeecc-----CCceeeeccCChhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 194 FFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFD-----STMEYTPLEIDTNVLQLITSNNFSTAQIA 268 (406) Q Consensus 194 ~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~-----~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia 268 (406) ++. .|..++..- +......+.++..+. +++.++ .+.++.++..+.-+ .|++..+.....|+ T Consensus 227 ~~a---~pqr~i~G~-d~d~~~~~~~~~~~~---------~i~~~~~de~~~~~~v~q~~~~~l~-~~~~~l~~~~~~~a 292 (422) T protein:vir:97 227 FYS---FPQKYVLGM-DPDAKPMEKWRATVS---------TLLEISKDEDGDKPTVGQFTTASMA-PFMEHLKMYASLFA 292 (422) T ss_pred Hhc---chhhhhccc-CcccccCchhhhhhh---------hhhccCCCCCCCcceeeecCCCChh-HHHHHHHHHHHHHh Confidence 333 344333211 111112222332222 334343 24567666554332 47899999999999 Q ss_pred HHhcCCHHHhcccccc-hhHHH---HHH----------HHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhc--ccch Q lcl|Aclame:pro 269 KALRVPSYKLGVNSPN-QSVAQ---LME----------DYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFD--TRSV 332 (406) Q Consensus 269 ~~fgvpp~~lg~~~~~-~n~~~---~~~----------~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~--~~~~ 332 (406) .+=++|++.||....+ ++.+. +.. ..+...++-+++.+....+..--...+.....+.|. .+.+ T Consensus 293 ~~s~lP~~~lg~~~~NpsSa~Ai~a~~~~L~~ka~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~~~~w~p~~~~~ 372 (422) T protein:vir:97 293 GGSGLTLDDLGFPSDNPSSVESIKAAHENLRAAGRKAQRSFSSGFLNVAYIAVCLRDEFPYLRNQFMDTVIKWEPLFEAD 372 (422) T ss_pred cccCCCHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhccceEEEccCCCCC Confidence 9999999999976543 22211 111 111122222222211111100000111111223332 1223 Q ss_pred ---hHHHHHHHHHHHhC--CCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCC Q lcl|Aclame:pro 333 ---TGRNVDEIVKLVNN--QILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKG 396 (406) Q Consensus 333 ---~~~~~~~~~~~~~~--g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~g 396 (406) ....++++.+++++ |++..+-+++++|+...+. ....+ . .....| T Consensus 373 ~~s~a~~aDa~~Kl~~a~~~~~~~~~~~~~lg~~~~~~---~~~~~--~--------------~~~~d~ 422 (422) T protein:vir:97 373 ANMLTLVGDGAIKLNQAIPGFMDADVIRDLTGVKGADK---PIPAI--T--------------EVTTDG 422 (422) T ss_pred hHHHHHHHHHHHHHHhhccccccHHHHHHHcCCCchhH---HHHHH--H--------------hhhccC Confidence 34456777888887 7888899999999965321 10100 0 000011 No 164 >protein:vir:9306 Length: 511 # NCBI annotation: phi Mu50B-like protein # Family: family:all:125 # MgeID: mge:165 # MgeName: phi 11 # Cross-refs: genbank:acc:NP_803284;genbank:gi:29028594;genbank:GeneID:1258040 Probab=98.34 E-value=1.2e-06 Score=53.02 Aligned_cols=391 Identities=9% Similarity=0.043 Sum_probs=177.5 Q ss_pred Ccc--c-----------------ccccCCCCcchhhHHHhhcCCccc------cc---chhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MSF--F-----------------QPLGTSKVSYDDYISSVLAGDVSQ------KY---LGVSALKNSDILTATSIIAGDI 52 (406) Q Consensus 1 M~~--f-----------------~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~a~~~~~v~~~i~~ia~~i 52 (406) +.+ | ++......+.-..+..+..|.... .. .+..-+.++-....++..+.-+ T Consensus 27 ~~~~~~~~e~~~~~~~~~i~~~i~~~~~~~~~r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl 106 (511) T protein:vir:93 27 VVYTYDGTESDLLQNVNEVSKYIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYF 106 (511) T ss_pred CcccccchhhhhhccHHHHHHHHHHHHHhhHHHHHHHHHHhcccCccccccCcCcccccCcceeecchHHHHHHHHhhhh Confidence 111 0 000000001011112222221100 00 0000011222334455555555 Q ss_pred ccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEc Q lcl|Aclame:pro 53 ARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEET 132 (406) Q Consensus 53 a~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~ 132 (406) -.-|+.+...+.+ ....+..++ ...........+..+.+.+|.+|.++..+. +|.+ .+..++|..+.+.++ T Consensus 107 ~g~p~~~~~~d~~--~~~~l~~~~-----~~n~~~~~~~~~~~~~~~~G~ay~~vy~de-~~~~-~i~~~~p~~~~~vyd 177 (511) T protein:vir:93 107 LGNPIQYQDDDKD--VLEVIEAFN-----DLNDVESHNRSLGLDLSIYGKAYELMIRNQ-DDET-RLYKSDAMSTFVIYD 177 (511) T ss_pred cccCeeeccCChH--HHHHHHHHH-----hhcCHhHHHHHHHHHHHhcCeeEEEEEeCC-CCce-EEEEEccceeEEEEc Confidence 5556655322211 111222222 223455677888899999999999988874 4655 477789999888877 Q ss_pred cC--cceEEEEE----eecCC---e----EEEEcceeeEeeccCC--------------------------CCCccccCH Q lcl|Aclame:pro 133 DN--HEIVYTFT----DMLTA---K----QVKCFAHDVIHWKFFS--------------------------HDTILGRSP 173 (406) Q Consensus 133 ~~--g~~~~~~~----~~~~g---~----~~~~~~~~vih~r~~~--------------------------~~~~~G~s~ 173 (406) +. +.+.+.+. ....+ . ...+.++.+.+++... .+...|.|. T Consensus 178 d~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~gd 257 (511) T protein:vir:93 178 NTIERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGD 257 (511) T ss_pred CCCCCceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCccccccccccccccCCCccceEEecCCCCCCCc Confidence 54 33322211 11111 0 1134455555543110 012357888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc-c-ccCceeeccCCceeeeccCCh Q lcl|Aclame:pro 174 LLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG-S-VGGSPLVFDSTMEYTPLEIDT 251 (406) Q Consensus 174 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g-~-~~~~~~vl~~g~~~~~l~~~~ 251 (406) ++.+...++..+.+.....+.+...+.|-.++......+.++..+.++.-.-.... . -.+...-..++.+++-++... T Consensus 258 ~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 337 (511) T protein:vir:93 258 YEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQY 337 (511) T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhCcceeeecCcccCchhhcccccccceecccccccccccccCCCCcceeEEeecC Confidence 88888888877766666666666666676666544444444433322211111100 0 001111234566666666555 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCHHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCc- Q lcl|Aclame:pro 252 NVLQLITSNNFSTAQIAKALRVPSYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLND- 317 (406) Q Consensus 252 ~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~- 317 (406) ....+....+...+.|+..-++|..-.+. .++-|. .....+..+..+|.-.++.|...+..+--.. T Consensus 338 ~~~~~~~~~~~L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~l~~~~~~~~ 417 (511) T protein:vir:93 338 DVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTWSIDA 417 (511) T ss_pred CHHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc Confidence 55556677778888899999998755432 222111 1233345556666666666666554432111 Q ss_pred -cchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCccc Q lcl|Aclame:pro 318 -KDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKG 394 (406) Q Consensus 318 -~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~ 394 (406) .+...+.+.| .+..+..+.++.+.++ .|+++..-+++++++-+-+....+++---. . +.....+....... T Consensus 418 ~~d~~~i~~~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~l~~v~d~~~E~~ri~~E~--~--~~~~~~~~~~~~~~ 491 (511) T protein:vir:93 418 NKDFNTVRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDE--K--ESIKKAQKGIYKDP 491 (511) T ss_pred ccccccceEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHH--H--HHHHHHhhhcccCC Confidence 1122233334 2344566777777766 478998888888754321111111110000 0 00000000111111 Q ss_pred CCCccCCCCCCC Q lcl|Aclame:pro 395 KGGEVNAEEDKS 406 (406) Q Consensus 395 ~gg~~~~~~~~~ 406 (406) ++.+++++++++ T Consensus 492 ~~~~~~~~~~~~ 503 (511) T protein:vir:93 492 RDINDDEQDDDT 503 (511) T ss_pred CCCCCCCCCCcc Confidence 111111111111 No 165 >protein:vir:99522 Length: 470 # NCBI annotation: putative protein # Family: family:all:125 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958533;genbank:gi:41179315;genbank:GeneID:2717160 Probab=98.33 E-value=1.3e-06 Score=52.84 Aligned_cols=381 Identities=11% Similarity=0.005 Sum_probs=177.3 Q ss_pred Cccccccc--------------C----------------CCCcchhhHHHhhcCCcc------cccchhhhhccHHHHHH Q lcl|Aclame:pro 1 MSFFQPLG--------------T----------------SKVSYDDYISSVLAGDVS------QKYLGVSALKNSDILTA 44 (406) Q Consensus 1 M~~f~~~~--------------~----------------~~~~~~~~~~~~~~~~~~------~~~~~~~a~~~~~v~~~ 44 (406) |--++... . +..+.-..+..+..|... ....+..-+.++-...+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~l~~Yy~g~~~i~~~~~~~~~~~~ki~~n~~~~I 80 (470) T protein:vir:99 1 MKDINYGRDKVTGNSSFIFPKGEKLTSNELLGFIAYNETVLKPRYRENMKLYLGKHKILTAPEKETGADNRIVVNSAKYV 80 (470) T ss_pred CccccCCcccccCCceEEeCCCCCcCHHHHHHHHHHHHHhhHHHHHHHHHHhccccccccCcccccCCcceeecchHHHH Confidence 43322100 0 000000111111111100 00111111222334455 Q ss_pred HHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCC Q lcl|Aclame:pro 45 TSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRP 124 (406) Q Consensus 45 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p 124 (406) |+..+.-+-.-|+.+...+.. .....+..++. ..........++...+.+|.+|.++..+ .+|++. +..++| T Consensus 81 vd~~~~~l~g~p~~~~~~~d~-~~~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~~~~~v~~d-~dg~~~-i~~~~p 152 (470) T protein:vir:99 81 VDVYNGYFCGIEPKLALLNDS-SKIDEIARWNR-----QENFFDTINEISKQCDIFGRSIASIYQG-EDARPH-LMYSSP 152 (470) T ss_pred HHHHhhhhccCCeeEeeCCch-hHHHHHHHHHH-----hcCHhHHHHHHHHHHHhcCeeEEEEEeC-CCCeEE-EEEEcc Confidence 566665555556654322211 11122333332 2355677888999999999999988887 457764 777899 Q ss_pred eeEEEEEccCcc--eEE---EEEeecCCe----EEEEcceeeEeecc--------------CC---------CCCccccC Q lcl|Aclame:pro 125 SETTVEETDNHE--IVY---TFTDMLTAK----QVKCFAHDVIHWKF--------------FS---------HDTILGRS 172 (406) Q Consensus 125 ~~~~~~~~~~g~--~~~---~~~~~~~g~----~~~~~~~~vih~r~--------------~~---------~~~~~G~s 172 (406) ..+.+.+++.+. +.+ ++.....+. ...+..+.+++++. ++ .+...|.| T Consensus 153 ~~~~~i~d~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~s 232 (470) T protein:vir:99 153 NHAFIIYDDTVQRQPLAFVHYQIDNSNNWTDAYGVIQYADKFYKFKGYDIEEDTNAAGYAINPYGLVPAVEFFENEERQG 232 (470) T ss_pred ceeEEEEcCCCCcceEEEEEEEEEecCCeeEEEEEEEecCeEEEEEecccccccccccccccCCCccceEeecCCCCCCc Confidence 999888876542 111 111111111 11233444444321 00 01235788 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeec-----cCCceeeec Q lcl|Aclame:pro 173 PLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVF-----DSTMEYTPL 247 (406) Q Consensus 173 ~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl-----~~g~~~~~l 247 (406) .++.+...++..+.+.......+...+.|-.++.......++.-+.. ..+.. .+++.+ +.+.++..+ T Consensus 233 d~e~v~~liDa~~~~~s~~~~~~~~~~~~~~~i~g~~~~~~~~g~~~-~~~~~-------~~~~~~~~~~~~~~~~~~~l 304 (470) T protein:vir:99 233 IFDSIKTLINALDKVISQKANQVEYFDNAYMYMIGFKLPEDDEGNPK-FDFKN-------NRVLYVSQLDPDTNPQIGFI 304 (470) T ss_pred chHhHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCcccccccchh-hhhhh-------cceeeecCCCCCCCCcceEE Confidence 88888888887777666666666666777666654332222221111 11111 122222 345566666 Q ss_pred cCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc-cccchhH------------HHHHHHHHHHHHHHHHHHHHHHHHhhc Q lcl|Aclame:pro 248 EIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV-NSPNQSV------------AQLMEDYVTNDLPFYFDAITSELGLKT 314 (406) Q Consensus 248 ~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n~------------~~~~~~~~~~~i~P~~~~ie~~l~~~l 314 (406) +.......+....+...+.|+..-++|+...+. .++-|.. .+..+..+..+|.-+++.|...+..+- T Consensus 305 ~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~ 384 (470) T protein:vir:99 305 AKPDADQMQENLIQHLTDFIFMMAMVPNIQDKNFAGNSSGVALQYKLFAMKNKADSKERKFDKSLMQLYRIVLATLFNNK 384 (470) T ss_pred eecCChHHHHHHHHHHHHHHHHHhCCccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC Confidence 655555555667788888999999999765432 2221211 222334555556666655555554332 Q ss_pred cCccchhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcccc-ccccC Q lcl|Aclame:pro 315 LNDKDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEY-QDKVG 391 (406) Q Consensus 315 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~-~~~~~ 391 (406) -...+...+.+.|. ...+..+.++.+.+++ |+++...++++++.-. +..+.+++.-- .. +..... +.... T Consensus 385 ~~~~~~~~i~v~f~~~~p~~~~e~a~~~~kl~--giis~et~l~~l~~vd-~~~E~eri~~E-~~---~~~~~~~~~~~~ 457 (470) T protein:vir:99 385 QDQELWSELDFKFTRNLPEDMASAIDNAKNAE--GIVSKKTQLGMIPDIE-PDAEMKQIAKE-KA---DAIKQTQQLSMP 457 (470) T ss_pred CcccccccceEEeCCCCCcCHHHHHHHHHHHh--ccCCHHHHHHhCCCCC-HHHHHHHHHHH-HH---HHHHHHHhhcCC Confidence 22222223344442 3335666677777664 7899888888775421 01111111000 00 000000 11111 Q ss_pred cccCCCccCCCCC Q lcl|Aclame:pro 392 IKGKGGEVNAEED 404 (406) Q Consensus 392 ~~~~gg~~~~~~~ 404 (406) ....+++.+++++ T Consensus 458 ~d~~~~d~~~ee~ 470 (470) T protein:vir:99 458 IDILKRDNNAEEE 470 (470) T ss_pred CCcCCCCCCccCC Confidence 1222222233333 No 166 >protein:vir:78907 Length: 518 # NCBI annotation: gp3 # Family: family:all:4147 # MgeID: mge:1859 # MgeName: A006 # Cross-refs: genbank:acc:YP_001468843;genbank:gi:157325445;genbank:GeneID:5601904 Probab=98.32 E-value=1.3e-06 Score=52.77 Aligned_cols=381 Identities=10% Similarity=0.011 Sum_probs=170.7 Q ss_pred CcccccccC------CCCcc------------------hhhH-H---HhhcCCcccccchhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MSFFQPLGT------SKVSY------------------DDYI-S---SVLAGDVSQKYLGVSALKNSDILTATSIIAGDI 52 (406) Q Consensus 1 M~~f~~~~~------~~~~~------------------~~~~-~---~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~i 52 (406) ||+|...+. +..+. ..+- . ..+.+.....-....-+..+--..+++.+|+-+ T Consensus 1 ~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~~~i~~~~A~ll 80 (518) T protein:vir:78 1 MGVWSVMTRFIKGWLNGKPNGSEPELIPKYLPLVPDNQKEWSKDSYLTSLWAQGYVPTVHDKLMNSGTGNEIVVVAAEYI 80 (518) T ss_pred CcchhhHHHHHHHhhcCCCCccchhccHHHhhhcccchhhhhhhhhhhhhcccCCCCccccccccCChHHHHHHHHHHhh Confidence 888754321 00000 0000 0 001111111001111122222344566666666 Q ss_pred ccce--eEEEecCCc--ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEE Q lcl|Aclame:pro 53 ARFP--LVKKDVNGD--IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETT 128 (406) Q Consensus 53 a~~~--~~~~~~~~~--~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~ 128 (406) ..=+ +.|...+.. ......+..+|. .-....-+...+...+..|.+++.+..+ +|++ .+..++++.+. T Consensus 81 ~~e~~~i~v~~~~~~d~e~~~~~l~~il~-----~n~f~~~~~~~~e~a~a~G~~~~k~~~d--~~~~-~i~~v~ad~~~ 152 (518) T protein:vir:78 81 SGKPLSIDVTGVNGSKDENLTKQLKEALR-----IDNFDSKSVKIVELAGGSGVSAVKINIL--NGRP-SISVHSSSQFW 152 (518) T ss_pred cCCCceEEecCccccCcHHHHHHHHHHHH-----hccHHHHHHHHHHHhhccCceEEEEEEE--CCee-EEEEEcCCeeE Confidence 4433 333221111 111112222232 1233455566677788889888766665 2554 45666776666 Q ss_pred EEEccCcce----------------EEEEE-------------------------eecCCeEEEE-------------cc Q lcl|Aclame:pro 129 VEETDNHEI----------------VYTFT-------------------------DMLTAKQVKC-------------FA 154 (406) Q Consensus 129 ~~~~~~g~~----------------~~~~~-------------------------~~~~g~~~~~-------------~~ 154 (406) +...+ |.+ +|... ....+..+.+ .. T Consensus 153 P~~~~-g~~~~~~f~~~~~~~~k~~~y~~lE~he~~~~~~~~~~~~~~~I~n~ly~~~~~~~v~~~~~~~~~~l~~~~~~ 231 (518) T protein:vir:78 153 IDFKN-NEPFRFNFFEEIPTSNKADIYYLVESREIKQWDKEGKKLSGGFVTYSVIKIDGDKTTPISAERLPEQITSYLHT 231 (518) T ss_pred EEeec-CcEEEEEEEEEeecCCcceeEEEEEeeccccccceeecccceeEEEEEeeecCccccccccccccccccccccc Confidence 64432 211 11100 0000100000 00 Q ss_pred --------------e-eeEeeccCC-----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEee-----cC Q lcl|Aclame:pro 155 --------------H-DVIHWKFFS-----HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMK-----GA 209 (406) Q Consensus 155 --------------~-~vih~r~~~-----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~-----~~ 209 (406) . -+.|++... ...++|+|.+.-+...++..+..-.....-|+.| .+...+.. .. T Consensus 232 ~~~~e~~~~~tg~~~~~~~~~~n~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g-~~~i~v~~~~l~~~~ 310 (518) T protein:vir:78 232 NDIQLNHSVSIGLKSMGAYLINNSPSNTRYPHLNLGESDLSQCTNYLFAVDYFFTVYMREGEKT-KTKIAASERMFRKKV 310 (518) T ss_pred ccCccceeeccCCccceEEeeccccccccccCCCcCcchHhhhhHHHHHHHHHHHHHHHHHHhC-CceeeechhHhccCC Confidence 0 022333211 1246799999999999998888877777777764 34433321 11 Q ss_pred CC-CHHHHHHHHHHHHHHhcccccCceeeccCCc----eeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccc Q lcl|Aclame:pro 210 QL-SGDARQRARQEFEKMREGSVGGSPLVFDSTM----EYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPN 284 (406) Q Consensus 210 ~~-~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~----~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~ 284 (406) .. .....-.+... .+.|.+-+ .-.++|. .++.++....+.++.+..+...+.|....|++|..+|..... T Consensus 311 ~~~~~~~~~~fd~~-~~~y~~i~----~~~~~~~~~~~~i~~~~~~Ir~e~~~~~~~~~l~~~~~~~G~s~~tfg~~~~~ 385 (518) T protein:vir:78 311 NKSTDKEEWSMNVD-EDYFMQFK----GTLDAGAKLNDMIQFMQGDFRDGSYRETMEYFAQKAVSKSGYNPATFNLGNRE 385 (518) T ss_pred CCCCCccccccCCC-CceEEEec----CcCCCCCccccceeeeecccChHHHHHHHHHHHHHHHHhhCCChhhcCccccc Confidence 00 00000000000 00010000 0012222 377788777888999999999999999999999999853211 Q ss_pred hhHH-------------HHHHHHHHHHHHHHHHHHHHHHHhhccCc-----cchhhhhhhhc--ccchhHHHHHHHHHHH Q lcl|Aclame:pro 285 QSVA-------------QLMEDYVTNDLPFYFDAITSELGLKTLND-----KDRRLYHIEFD--TRSVTGRNVDEIVKLV 344 (406) Q Consensus 285 ~n~~-------------~~~~~~~~~~i~P~~~~ie~~l~~~l~~~-----~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 344 (406) .+.. ...+..+..+|.-++..|.+.+....... .+.....+.|+ +..|..+.++.+.+++ T Consensus 386 ~TATei~s~~~~~~~t~~~~~~~~e~al~~l~~~i~~l~~~~~~~~~~~~~~~~~~v~i~f~D~i~~D~~~~~~~~~~~v 465 (518) T protein:vir:78 386 VKATEIWSLQDATVRKIEKKKRLIQNVYEQMLWDFLYLLTGGTNNKEKAIMRDEIRVIIEFPDPMSVNLNELSSTLNNMN 465 (518) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEEeCCCCCCCHHHHHHHHHHHH Confidence 1111 11133444444444444444333211110 11122344443 4567788888888999 Q ss_pred hCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCc-cchhhccccccccCcccCCC Q lcl|Aclame:pro 345 NNQILTPNQGLVELGKQKSTDPNMDRYQSSLNY-VFLDKKEEYQDKVGIKGKGG 397 (406) Q Consensus 345 ~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~-~~~~~~~~~~~~~~~~~~gg 397 (406) .+|+|++.++-+++... .++++.++-+..... ........+.+....+.+|| T Consensus 466 ~aGimS~e~~i~~~~~~-~~deea~~e~~ri~~E~~~~~~~~p~~~~g~~~~~g 518 (518) T protein:vir:78 466 SALAMSVEEKVKLIHPK-WEDEEIQAEVKRIYLENAIGEVPDPEAIGGMETKGG 518 (518) T ss_pred hcCCCCHHHHHHHhCCC-CCHHHHHHHHHHHHHHhcccCCCCCccccCCCCCCC Confidence 99999999866655322 333333321110000 00000111122233445555 No 167 >protein:vir:80680 Length: 441 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1884 # MgeName: PA6 # Cross-refs: genbank:acc:YP_001285579;genbank:gi:148727085;genbank:GeneID:5247051 Probab=98.31 E-value=1.4e-06 Score=52.67 Aligned_cols=368 Identities=11% Similarity=0.023 Sum_probs=150.6 Q ss_pred Cc-----ccccccC---CCCcchhhHHHhhcCCccc-----ccchh---hhhccHHHHHHHHHHHHhhccceeEEEecCC Q lcl|Aclame:pro 1 MS-----FFQPLGT---SKVSYDDYISSVLAGDVSQ-----KYLGV---SALKNSDILTATSIIAGDIARFPLVKKDVNG 64 (406) Q Consensus 1 M~-----~f~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~---~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 64 (406) |. |.+.+.. +..+.-..+..+..|.... ...+. .-.-+.-..-+|+..+..+ .+.-++... T Consensus 1 ~~~~~~~~i~~l~~~~~~~~~r~~~l~~Yy~G~~~i~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l---~~~g~~~~d 77 (441) T protein:vir:80 1 MNSDELALIEGMYDRIQRLSSWHCCIEGYYEGSNRVRDLGVAIPPELQRVQTVVSWPGIAVDALEERL---DWLGWTNGD 77 (441) T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhcCcccchhhhhhhhhcchHHHHHHHHHhhh---ccccccCCC Confidence 10 1111000 0000001111112221110 00000 0000111122333333222 111122111 Q ss_pred cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCc-ceEE--EE Q lcl|Aclame:pro 65 DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNH-EIVY--TF 141 (406) Q Consensus 65 ~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g-~~~~--~~ 141 (406) ...+..++.. -+.......+..+.+++|.+|.++..+ ..|.| .+..++|..+.+.++... .+.. .+ T Consensus 78 ----~~~l~~i~~~-----n~~~~~~~~~~~~~~~~G~a~~~v~~d-~~g~~-~i~~~~p~~~~~i~d~~~~~~~~~~~~ 146 (441) T protein:vir:80 78 ----GYGLDGVYAA-----NRLATASCDVHLDALIFGLSFVAIIPH-GDGTV-SVRPQSPKNCTGKFSADGSRLDAGLVV 146 (441) T ss_pred ----hHHHHHHHHh-----cCHHHHHHHHHHHHhhcCeeEEEEEeC-CCCce-EEEEEccceEEEEEeCCCCceeEEEEE Confidence 1234444332 245677888899999999999998887 44766 478889998887766543 2211 11 Q ss_pred Ee-ecCC-eE-EEEccee--------------------------eEeeccCCC-CCccccCHHH-HHHHHHHHHHHHHHH Q lcl|Aclame:pro 142 TD-MLTA-KQ-VKCFAHD--------------------------VIHWKFFSH-DTILGRSPLL-SLGDEIDLQTGGINT 190 (406) Q Consensus 142 ~~-~~~g-~~-~~~~~~~--------------------------vih~r~~~~-~~~~G~s~~~-~~~~~i~~~~~~~~~ 190 (406) +. ...+ .. ..+.++. |+||++++. ..++|.|-+. .+...++..+..... T Consensus 147 ~~~~~~~~~~~~vy~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~l~~~v~~liDa~~~~~s~ 226 (441) T protein:vir:80 147 QQTCDPEVVEAELLLPDVIVQVERRGSREWVEVDRIPNVLGAVPLVPIVNRRRTSRIDGRSEITRSIRAYTDEAVRTLLG 226 (441) T ss_pred EEEecCceEEEEEEecCeEEEEEEcCCcceeeccccccCCCceeEEEeeccccCCccCCcccchhhHHHHHHHHHHHHHH Confidence 11 1111 11 1122222 444543322 2356777553 233444444433333 Q ss_pred HHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccC-----CceeeeccCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 191 LIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDS-----TMEYTPLEIDTNVLQLITSNNFSTA 265 (406) Q Consensus 191 ~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~-----g~~~~~l~~~~~d~~~~e~~~~~~~ 265 (406) ......-.+.|..+++ ....+++..+..+.. .++++.++. +.++.++..... ..+++..+.... T Consensus 227 ~~~~~~~~~~~~~~i~-G~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~ 295 (441) T protein:vir:80 227 QSVNRDFYAYPQRWVT-GVSADEFSQPGWVLS---------MASVWAVDKDDDGDTPNVGSFPVNSP-TPYSDQMRLLAQ 295 (441) T ss_pred HHHHHHhhcCceeeee-cCCccccccchhhhc---------ccccccCCCCCCCCcceeEecCccch-HHHHHHHHHHHH Confidence 3333343444554443 222222222211111 122333332 245544443222 236777888889 Q ss_pred HHHHHhcCCHHHhcccccchhHHH--------------HHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhh--cc Q lcl|Aclame:pro 266 QIAKALRVPSYKLGVNSPNQSVAQ--------------LMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEF--DT 329 (406) Q Consensus 266 ~Ia~~fgvpp~~lg~~~~~~n~~~--------------~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~--~~ 329 (406) .|+..-++|+..+|..+.+..+.. ..+..+...|.-.++.+...++...-.......+.+.| .. T Consensus 296 ~~~~~~~~p~~~~g~~~~~~~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~~~~~~~~~~~~~i~~~f~~~~ 375 (441) T protein:vir:80 296 LTAGEAAVPERYFGFITSNPPSGEALAAEESRLVKRAERRQTSFGQGWLSVGFLAAKALDSRVDEADFFGDVGLRWRDAS 375 (441) T ss_pred HHhcccCCCHHHhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccceeeeEEeCCCC Confidence 999999999999987653321111 22223333333333333333222111111111222333 23 Q ss_pred cchhHHHHHHHHHHHhCCCcC--HHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 330 RSVTGRNVDEIVKLVNNQILT--PNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 330 ~~~~~~~~~~~~~~~~~g~~t--~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) ..+..+.++++.+++++|++. ..-+++.+|+.+-+- .++. ....+.+.+.. +.. |.....-+|= T Consensus 376 ~~~~~e~ad~~~kl~~~g~~~~s~~~~~~~l~~~~~e~---~~~~--------~e~~e~~~~~~-~~~-~~~~~~~~~~ 441 (441) T protein:vir:80 376 TPTRAATADAVTKLVGAGILPADSRTVLEMLGLDDVQV---EAVM--------RHRAESSDPLA-VLA-GAISRQTNEV 441 (441) T ss_pred CcCHHHHHHHHHHHHhcCcccccHHHHHHhCCCCHHHH---HHHH--------HHHHHHHHHHH-HHh-hhhhcccccC Confidence 345677788888999999764 344677777654211 1110 00000000000 000 0000000000 No 168 >protein:vir:93747 Length: 472 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1475 # MgeName: 55 # Cross-refs: genbank:acc:YP_240454;genbank:gi:66396119;genbank:GeneID:5133516 Probab=98.29 E-value=1.7e-06 Score=52.28 Aligned_cols=375 Identities=10% Similarity=0.015 Sum_probs=166.5 Q ss_pred Cc----cccccc--------------------CCCCcchhhHHHhhcCCcc-----cc---------cchhhhhccHHHH Q lcl|Aclame:pro 1 MS----FFQPLG--------------------TSKVSYDDYISSVLAGDVS-----QK---------YLGVSALKNSDIL 42 (406) Q Consensus 1 M~----~f~~~~--------------------~~~~~~~~~~~~~~~~~~~-----~~---------~~~~~a~~~~~v~ 42 (406) |. +|+-.. +.....-..+..+..|... .. ..+..-+..+-.. T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri~~n~~~ 84 (472) T protein:vir:93 5 QPTQTEIFDAIVRTNNKPETLEEMIVRYIKQHLEKLPEISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHA 84 (472) T ss_pred CCcchhhhhceeeecCchhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhccccccccccccccccchHH Confidence 11 000000 0000000011112211100 00 0000011233345 Q ss_pred HHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeec Q lcl|Aclame:pro 43 TATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFY 122 (406) Q Consensus 43 ~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l 122 (406) .+|+..+.-+-.-|+.+...+.+ ....+..++. | ........+..+.+.+|.+|.++..+. +|++ .+..+ T Consensus 85 ~ivd~~~~~l~g~~~~~~~~d~~--~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~v~~d~-d~~~-~i~~~ 154 (472) T protein:vir:93 85 NLVDQKVSYIVGKPIAFKHTDDE--VVKRIDEVLG---N---RFDDKLHSVLTGASNKGIEWLHPYLDE-EGEF-KLFRV 154 (472) T ss_pred HHHHHHhhhhcccCeeeccCChH--HHHHHHHHHh---c---cHHHHHHHHHHHHhhcCeEEEEEEECC-CCce-EEEEE Confidence 56666666665556654322211 1122222221 2 234666677888999999999988874 4665 47778 Q ss_pred CCeeEEEEEccC--cceEEEE--EeecCCeE-EEEcceeeEeecc----------------------C-----C----CC Q lcl|Aclame:pro 123 RPSETTVEETDN--HEIVYTF--TDMLTAKQ-VKCFAHDVIHWKF----------------------F-----S----HD 166 (406) Q Consensus 123 ~p~~~~~~~~~~--g~~~~~~--~~~~~g~~-~~~~~~~vih~r~----------------------~-----~----~~ 166 (406) +|..+.+.+++. +.+.+.+ +....... ..+....+.+++. + | .+ T Consensus 155 ~p~~~~~i~d~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~n 234 (472) T protein:vir:93 155 PAEQGIPIWTDKEHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKN 234 (472) T ss_pred cccceEEEEcCCCCCceEEEEEEEEeecceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecC Confidence 998888887643 3332221 11111111 1122222222210 0 0 01 Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeee Q lcl|Aclame:pro 167 TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTP 246 (406) Q Consensus 167 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~ 246 (406) ...|.|-++.+...++..+.+.....+.+...+.|-.++.... .++...+...+. ..+++.++.+.+.+. T Consensus 235 n~~g~s~~e~v~~liDa~~~~~s~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 304 (472) T protein:vir:93 235 NDLEISDIFMYKTLIDAYNRRLSDLSNTFKDSNELTYVLTNYD---DQELPEFKRLLR-------YYGAIKVSDNGGVDT 304 (472) T ss_pred CCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhcCceeEeecCC---cccchhhHHHHh-------hccccccCCCCccee Confidence 2358888888888887777666666666666666765554322 222222222221 123444555555555 Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc-cccchh--H----------HHHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 247 LEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV-NSPNQS--V----------AQLMEDYVTNDLPFYFDAITSELGLK 313 (406) Q Consensus 247 l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n--~----------~~~~~~~~~~~i~P~~~~ie~~l~~~ 313 (406) ++.......+....+...+.|+..-++|..-.+. +++-|. . .+..+..+...|.-+++.|...++.+ T Consensus 305 l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~ 384 (472) T protein:vir:93 305 IQVEVPVENSKKYLDELYQKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIK 384 (472) T ss_pred EeecCCHHHHHHHHHHHHHHHHHHhCCCCCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC Confidence 6555556667777888888899999888654432 121111 1 12223444445555555554443321 Q ss_pred ccCccchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcccc-cc-c Q lcl|Aclame:pro 314 TLNDKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEY-QD-K 389 (406) Q Consensus 314 l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~-~~-~ 389 (406) .+...+.+.| ....+..+.++.+.++ .|+++..-+.++++.-.-+....+++-.-. +..... +. . T Consensus 385 ----~~~~~i~v~f~~~~p~~~~~~~~~~~k~--~giis~et~l~~l~~~~d~~~E~~ri~~E~-----~~~~~~~~~~~ 453 (472) T protein:vir:93 385 ----GEHKDVDISFNYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQ-----MEYNKQLPNLD 453 (472) T ss_pred ----cccceeeEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHH-----HHHHHhccCcC Confidence 1222233333 3344566667777765 478998888887755321111111110000 000000 00 0 Q ss_pred cCcccCCCccCCCCCCC Q lcl|Aclame:pro 390 VGIKGKGGEVNAEEDKS 406 (406) Q Consensus 390 ~~~~~~gg~~~~~~~~~ 406 (406) ......+++++++++++ T Consensus 454 ~~~~d~~~~~~~~~~~~ 470 (472) T protein:vir:93 454 DGGADGAQQQERSNNKE 470 (472) T ss_pred cccCCCCCCCCCCCccc Confidence 01111111111111111 No 169 >protein:vir:94805 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1531 # MgeName: 29 # Cross-refs: genbank:acc:YP_240531;genbank:gi:66396197;genbank:GeneID:5133585 Probab=98.29 E-value=1.7e-06 Score=52.26 Aligned_cols=376 Identities=9% Similarity=0.004 Sum_probs=167.3 Q ss_pred Ccccc---ccc---CCCCcchhhHHHhhcCCcc--------------cccchhhhhccHHHHHHHHHHHHhhccceeEEE Q lcl|Aclame:pro 1 MSFFQ---PLG---TSKVSYDDYISSVLAGDVS--------------QKYLGVSALKNSDILTATSIIAGDIARFPLVKK 60 (406) Q Consensus 1 M~~f~---~~~---~~~~~~~~~~~~~~~~~~~--------------~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 60 (406) |.... ++- +.....-..+..+..|... ....+..-+.++-...+|+..+.-+-.-|+.+. T Consensus 43 ~~~~~~i~~~i~~~~~~~~r~~~l~~YY~g~~~I~~~~~~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~G~p~~~~ 122 (492) T protein:vir:94 43 ETLEEMIVRYIKQHLEKLPEISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKPIAFK 122 (492) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccccccccccchHHHHHHHHHhhhcccCceec Confidence 11100 000 0000001111122211100 000001112233344566666666666666553 Q ss_pred ecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccC--cceE Q lcl|Aclame:pro 61 DVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN--HEIV 138 (406) Q Consensus 61 ~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~--g~~~ 138 (406) ..+.+ ....+..++. | ........+..+.+.+|.+|.++..+. +|++ .+..++|..+.+.+++. +.+. T Consensus 123 ~~d~~--~~~~l~~~~~---n---~~~~~~~~~~~~a~~~G~a~~~v~~d~-dg~~-~~~~~~p~~~~~v~d~~~~~~~~ 192 (492) T protein:vir:94 123 HTDDE--VVKRIDEVLG---N---RFDDKLHSVLTGASNKGIEWLHPYLDE-EGEF-KLFRVPAEQGIPIWTDKEHEELE 192 (492) T ss_pred cCchH--HHHHHHHHHh---c---cHHHHHHHHHHHHhhCCeEEEEEEecC-CCce-EEEEEcccceEEEEcCCCCCceE Confidence 22211 1222333321 2 244666778899999999999988874 4665 47778998888877643 3332 Q ss_pred EEE--EeecCC-eEEEEcceeeEeecc----------------------CCC---------CCccccCHHHHHHHHHHHH Q lcl|Aclame:pro 139 YTF--TDMLTA-KQVKCFAHDVIHWKF----------------------FSH---------DTILGRSPLLSLGDEIDLQ 184 (406) Q Consensus 139 ~~~--~~~~~g-~~~~~~~~~vih~r~----------------------~~~---------~~~~G~s~~~~~~~~i~~~ 184 (406) +.+ +..... ....+....+.++.. ++. +...|.|-++.+...++.. T Consensus 193 a~ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~sd~e~v~~liDa~ 272 (492) T protein:vir:94 193 AFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYKTLIDAY 272 (492) T ss_pred EEEEEEeeccceeEEEEecCeEEEEEEecCeeeeccccccccccccccccCCCccceEEecCCCCCCCchHHHHHHHHHH Confidence 221 111111 111222233333320 110 1235788888888888877 Q ss_pred HHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHH Q lcl|Aclame:pro 185 TGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFST 264 (406) Q Consensus 185 ~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~ 264 (406) +.+..-..+.+...+.|-.++..... ++...++..+. ..+++.++.+.+++.+........+....+... T Consensus 273 d~~~S~~~~~~~~~~~p~lv~~g~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 342 (492) T protein:vir:94 273 NRRLSDLSNTFKDSNELTYVLKNYDD---QELPEFKRLLR-------YYGAIKVSDNGGVDTIQVEVPVENSKKYLDELY 342 (492) T ss_pred HHHHHHHHHHHHHhcCceeeeecCCc---ccchhhHHHHh-------hccceecCCCCcceeEeccCCHHHHHHHHHHHH Confidence 77666666666666667666543222 22222222221 123444555555555544444445556667777 Q ss_pred HHHHHHhcCCHHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhh--cc Q lcl|Aclame:pro 265 AQIAKALRVPSYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEF--DT 329 (406) Q Consensus 265 ~~Ia~~fgvpp~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~--~~ 329 (406) +.|+..-++|..-.+. .++-|. .....+..+...|.-+++.|...+..+ .+...+.+.| .+ T Consensus 343 ~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~~----~~~~~i~v~f~~~~ 418 (492) T protein:vir:94 343 QKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIK----GEHKDVDISFNYNK 418 (492) T ss_pred HHHHHHhCCcCCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----cccceeeEEecCCC Confidence 7788888877533321 111111 122333444555555555555544321 1222233333 34 Q ss_pred cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 330 RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 330 ~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) ..+..+.++.+.+++ |+++..-++++++.-+-+....+++---. -+.....+........++.+++++++. T Consensus 419 p~~~~e~~~~~~kl~--giiS~et~~~~l~~v~d~~~E~eri~~E~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (492) T protein:vir:94 419 VANTELQVQTAQQSM--GIVSHETVLENHPFVEDLQAELERIEQEQ----MEYNKQLPNLDDGGADSAQQQERSNNK 489 (492) T ss_pred CCCHHHHHHHHHHHh--ccCchHHHHHhCCCCCCHHHHHHHHHHHH----HHHHhhccccccccCCCCccccCCccc Confidence 456667777777664 89998888888865322111111110000 000000000000111111111111111 No 170 >protein:vir:78227 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1849 # MgeName: Bethlehem # Cross-refs: genbank:acc:YP_001491663;genbank:gi:157786487;genbank:GeneID:5625705 Probab=98.27 E-value=1.1e-06 Score=53.20 Aligned_cols=387 Identities=11% Similarity=0.049 Sum_probs=154.3 Q ss_pred Cccc----ccccC---CCCcchhhHHHhhcCCcc-----cccchhhh---hccHHHHHHHHHHHHhhccceeEEEecCCc Q lcl|Aclame:pro 1 MSFF----QPLGT---SKVSYDDYISSVLAGDVS-----QKYLGVSA---LKNSDILTATSIIAGDIARFPLVKKDVNGD 65 (406) Q Consensus 1 M~~f----~~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~~~a---~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 65 (406) |+=. +.+.. +..+.-..+..+..|... ....+... ....-...+|+..+..+--..|. ...+ T Consensus 1 ~~t~~~~i~~L~~~~~~~~~r~~~l~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~---~~~d 77 (480) T protein:vir:78 1 MTTYHEHVERLQGLLARDLPNLLEAEAYRNGTRRLKTIGIGAPPELAYLDVQPGWVATYLRTLSDRLDIEGFR---ISED 77 (480) T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccchhHhhhhhhcchHHHHHHHHHhhhccCcee---cCCC Confidence 5421 11000 000000111112222111 01111000 00111223344444333222232 2222 Q ss_pred ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecC-----CCceeEEEeecCCeeEEEEEccC--cceE Q lcl|Aclame:pro 66 IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDP-----KTNQALQFQFYRPSETTVEETDN--HEIV 138 (406) Q Consensus 66 ~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~-----~~g~~~~l~~l~p~~~~~~~~~~--g~~~ 138 (406) ......+..+++. | ........+..+.+++|.||.++.+.. ..|.+. +..++|..+.+.++.. +.+. T Consensus 78 ~~~~~~l~~i~~~--N---~~d~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~g~~~-i~~~~p~~~~~~~D~~~~~~~~ 151 (480) T protein:vir:78 78 SEGLEELWNWWQA--N---DLDEESVLGHDDSLTFGRSYITVSHPDVESGDPAGIPL-IRVESPLYMYAELDPRNTRRVT 151 (480) T ss_pred chhHHHHHHHHHh--c---CHHHHHHHHHHHHhhcCceEEEEecCccccCCCCCeeE-EEEEcccceEEEEcCCCccceE Confidence 2223344444431 2 334677788899999999998876531 234443 6678888888777643 2222 Q ss_pred EEE----EeecCCeE---EEEcce-----------------------------eeEeeccCCC-CCccccCHHHH-HHHH Q lcl|Aclame:pro 139 YTF----TDMLTAKQ---VKCFAH-----------------------------DVIHWKFFSH-DTILGRSPLLS-LGDE 180 (406) Q Consensus 139 ~~~----~~~~~g~~---~~~~~~-----------------------------~vih~r~~~~-~~~~G~s~~~~-~~~~ 180 (406) +.+ .....+.. ..+.++ .|++|++++. .+.+|.|-+.- +... T Consensus 152 ~~i~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~s~i~~~v~~l 231 (480) T protein:vir:78 152 RAVRLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGRSEISPELRKV 231 (480) T ss_pred EEEEEEEeecCCCceEEEEEEeCCeEEEEEecCCCccccccccccccCCCCCcceEEeecccccCCccCcccchhhHHHH Confidence 211 11111110 011122 2344444322 23577776653 4444 Q ss_pred HHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeec-cCCceeeeccCChhHHHHHHH Q lcl|Aclame:pro 181 IDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVF-DSTMEYTPLEIDTNVLQLITS 259 (406) Q Consensus 181 i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl-~~g~~~~~l~~~~~d~~~~e~ 259 (406) ++..+...........-.+.|..++. .....+...+.....|.... +.++.+ +++.++.++..... ..+++. T Consensus 232 ~Da~~~~~s~~~~~~~~~a~p~~~i~-G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 304 (480) T protein:vir:78 232 TDAASRTLMNLQSASQILGTPLRVIS-GVTTDELTNDGENTTLDIYY-----GRILTLASEAAKISEFKAAEL-RNFAEE 304 (480) T ss_pred HHHHHHHHHHHHHHHHhhcchhhhhh-cCCccccccccccchhhhhh-----hhhccCCCCCceEEecCccCH-HHHHHH Confidence 44444333333333333344544443 11111111111111122111 223333 35577777665432 236777 Q ss_pred HHHHHHHHHHHhcCCHHHhcccccc-hhHHHHH-------------HHHHHHHHHHHHHHHHHHHHhhccCccchhhhhh Q lcl|Aclame:pro 260 NNFSTAQIAKALRVPSYKLGVNSPN-QSVAQLM-------------EDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHI 325 (406) Q Consensus 260 ~~~~~~~Ia~~fgvpp~~lg~~~~~-~n~~~~~-------------~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~ 325 (406) .+..+.+|+..=++|+..+|....+ ++.+... +..+...|.-.++.+....... ...+...+.+ T Consensus 305 l~~~i~~~~~~~~~p~~~~g~~~~n~~Sg~Alk~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~g~~--~~~~~~~i~v 382 (480) T protein:vir:78 305 MEVFRKEAASITGLPPQYLSSSSENPASAEAIIATDSRIVKMAERKGRIFGGAWERAMRIAMQIMGRE--VTEEYTRLET 382 (480) T ss_pred HHHHHHHHhcccCCChHHhccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ccccceeeeE Confidence 8888889999999999999864422 2211111 1111222222222221111100 0011112233 Q ss_pred hhc--ccchhHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcccc--cccc-CcccCCCc Q lcl|Aclame:pro 326 EFD--TRSVTGRNVDEIVKLVNNQ--ILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEY--QDKV-GIKGKGGE 398 (406) Q Consensus 326 ~~~--~~~~~~~~~~~~~~~~~~g--~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~--~~~~-~~~~~gg~ 398 (406) .|. ...+..+.++++.+++++| +++..-+++.+|+.+-+.+...+.--.....+++..... +... .....+|+ T Consensus 383 ~f~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~lg~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (480) T protein:vir:78 383 VWRDPSTPTVAAKADAVSKLYANGQGPIPKEQARIDLGYTATQREQMRDWDKQETEDMIDTLYSTTKAQADATPKPTVTE 462 (480) T ss_pred EecCCCCCCHHHHHHHHHHHHHhccccCCHHHHHhcCCCCHhHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCCCC Confidence 331 1235567777888888765 677777888888765322111111000011111111100 0000 01111122 Q ss_pred cCCCCCCC Q lcl|Aclame:pro 399 VNAEEDKS 406 (406) Q Consensus 399 ~~~~~~~~ 406 (406) . .+++++ T Consensus 463 ~-~~~~~~ 469 (480) T protein:vir:78 463 T-KTETQT 469 (480) T ss_pred C-CCcccc Confidence 1 112222 No 171 >protein:vir:94742 Length: 409 # NCBI annotation: putative portal protein # Family: family:all:524 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996701;genbank:gi:45597416;genbank:GeneID:2767966 Probab=98.27 E-value=1.8e-06 Score=52.08 Aligned_cols=339 Identities=9% Similarity=0.006 Sum_probs=150.0 Q ss_pred Ccc--ccccc---CCCCcchhhHHHhhcCCccc-----ccchhhh-h-c--cHHHHHHHHHHHHhhccceeEEEecCCcc Q lcl|Aclame:pro 1 MSF--FQPLG---TSKVSYDDYISSVLAGDVSQ-----KYLGVSA-L-K--NSDILTATSIIAGDIARFPLVKKDVNGDI 66 (406) Q Consensus 1 M~~--f~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~a-~-~--~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 66 (406) |.. ...+. .+..+.-..+..+..|.... .+.+.-. . + ..-..-+|+.+|..+ -+.=++ T Consensus 1 ~~~~~i~~L~~~~~~~~~r~~~~~~yY~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~iVds~a~rl---~~~Gf~----- 72 (409) T protein:vir:94 1 MTEKGIGYLRFKLSVHKRRAEMRYDQYAMKYVDRFKGITIPQALSQQYRSILGWCAKGVDSLADRL---VFREFE----- 72 (409) T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHhcccCchhhcChhhhHHHHHHHhhhcchhHHHHHHhHhhc---ccCccc----- Confidence 331 11110 00111111122222222111 1111100 0 0 011112233333221 121111 Q ss_pred cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc-eEEE--EEe Q lcl|Aclame:pro 67 IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE-IVYT--FTD 143 (406) Q Consensus 67 ~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~-~~~~--~~~ 143 (406) ..+..+..++. -|. .......+..+.+++|.+|+.+..+ .+|.| .+.+++|..+...++...+ +... +.. T Consensus 73 ~~d~~l~~i~~--~N~---ld~~~~~~~~~aliyG~sf~~v~~~-~dg~~-~i~~~sp~~~~~i~D~~~~~~~~a~~~~~ 145 (409) T protein:vir:94 73 NDDFTVNEIFE--ENN---PDIFFDSAVLSSLIASCSFTYISKG-ENDAV-RLQVIEAVNATGIIDPITGLLTEGYAVLE 145 (409) T ss_pred CCchHHHHHHH--hcC---hhHHHHHHHHHHHHhcceeEEEecC-CCCce-EEEEeccceEEEEEecCCCceeeeEEEEE Confidence 11223444432 232 2345567788889999999998876 44665 5788899888877765432 2211 111 Q ss_pred e-cCCeE---EEEccee----------------------eEeeccCCC-CCccccCHH----HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 144 M-LTAKQ---VKCFAHD----------------------VIHWKFFSH-DTILGRSPL----LSLGDEIDLQTGGINTLI 192 (406) Q Consensus 144 ~-~~g~~---~~~~~~~----------------------vih~r~~~~-~~~~G~s~~----~~~~~~i~~~~~~~~~~~ 192 (406) . ..+.. ..+.++. |++|.+.+. ..++|.|.+ ..+...+.....-..... T Consensus 146 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~vPvV~f~n~~~~~~~~G~s~I~e~v~~l~da~~r~~~~~~~~~ 225 (409) T protein:vir:94 146 RDENNNVVLEAHFLPDRTDYYYRDSRNNISIANPTGHPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAKRTLERADVTA 225 (409) T ss_pred ecCCCceEEEEEEecCcEEEEEecCceeEeeeCCCCCcceEEeccccccccccCccccchhHHHHHHHHHHHHHHHHHHH Confidence 1 11111 1111222 344443322 346787754 344444444443333444 Q ss_pred HHHhcCCCcceEEe-ecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 193 KFFKDGFSSGILTM-KGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKAL 271 (406) Q Consensus 193 ~~~~ng~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~f 271 (406) .++. .|..++. .+.+ .+..+.++........-.... -+.+.++.++....- ..|++..+..+..+|..= T Consensus 226 e~~a---~pqr~i~G~d~d--~~~~~~~~~~~~~i~~~~~d~----dg~~~~v~q~~~~~l-~~~~~~l~~~~~~~a~~t 295 (409) T protein:vir:94 226 EFYS---FPQKYVTGLSDD--AEPMETWKATVSSMLQFTKDE----DGDKPTLGQFTQPSM-SPFTEQLRTAAAGFAGET 295 (409) T ss_pred HHhc---ChhheeEecCCC--CcccchhhhhHHHhhcCCCCC----CCCCceEEecCCCCh-hHHHHHHHHHHHHHhhhc Confidence 4444 3544443 2221 123334444333333211000 013466666654332 247899999999999999 Q ss_pred cCCHHHhcccccc-hhHHH---HHH----------HHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhc--ccch--- Q lcl|Aclame:pro 272 RVPSYKLGVNSPN-QSVAQ---LME----------DYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFD--TRSV--- 332 (406) Q Consensus 272 gvpp~~lg~~~~~-~n~~~---~~~----------~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~--~~~~--- 332 (406) ++|++.||....+ ++.+. +.. ..+..+++-+++.+-...+..--...+.....+.+. ...+ T Consensus 296 ~lP~~~lg~~~~NpsSa~Al~a~~~~L~~~a~~k~~~fg~~~~~~~rla~~i~~~~~~~~~~~~~~~v~W~p~~~~~~~~ 375 (409) T protein:vir:94 296 GLTLDDLGFVSDNPSSVEAIKASHENLRLAGRKAQRSLGAGLLNVAYLAACLRDDAPYLREQFRKTKPKWEPLFEADASM 375 (409) T ss_pred CCCHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccccceEEeccCCCcchHH Confidence 9999999975543 22211 111 111122222222111111100000111112222232 1122 Q ss_pred hHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 333 TGRNVDEIVKLVNNQ--ILTPNQGLVELGKQKST 364 (406) Q Consensus 333 ~~~~~~~~~~~~~~g--~~t~NE~R~~~g~~p~~ 364 (406) +...++++.++++.| +...+-+++++|+..-+ T Consensus 376 ~a~~aDa~~Kl~~ag~~~~~~~~~~~~lG~~~~d 409 (409) T protein:vir:94 376 LSLIGDGAIKLNQAIPEFINKDTIRDLTGIEGGE 409 (409) T ss_pred HHHHHHHHHHHHHhcccccchhHHHHHcCCCCCC Confidence 345577889999998 56678899999999753 No 172 >protein:vir:99781 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1497 # MgeName: phiETA2 # Cross-refs: genbank:acc:YP_001004303;genbank:gi:122891757;genbank:GeneID:4712336 Probab=98.27 E-value=1.9e-06 Score=52.00 Aligned_cols=395 Identities=9% Similarity=0.050 Sum_probs=170.7 Q ss_pred Ccc-------------------cccccCCCCcchhhHHHhhcCCccc-----c----cchhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MSF-------------------FQPLGTSKVSYDDYISSVLAGDVSQ-----K----YLGVSALKNSDILTATSIIAGDI 52 (406) Q Consensus 1 M~~-------------------f~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~a~~~~~v~~~i~~ia~~i 52 (406) +.| .++......+.-..+..+..|.... . ..+..-+.+.-..-.|+..+.-+ T Consensus 27 ~~~~~~~~e~~~~~~~~~i~~~i~~~~~~~~~r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl 106 (511) T protein:vir:99 27 VVYTYDGTESDLLQNVNEVSKYIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYF 106 (511) T ss_pred CccccchhhhhhhccHHHHHHHHHHHHHhhHHHHHHHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHHhhh Confidence 111 1100000011111122222221110 0 00000011222334455555555 Q ss_pred ccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEc Q lcl|Aclame:pro 53 ARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEET 132 (406) Q Consensus 53 a~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~ 132 (406) -.-|+.+...+.+ ....+..+++ .-........+....+.+|.+|.++.++. +|.+ .+..++|..+.+.++ T Consensus 107 ~g~p~~~~~~d~~--~~~~l~~~~~-----~n~~~~~~~~~~~~~~i~G~a~~~vy~de-d~~~-~i~~~~p~~~~~vyd 177 (511) T protein:vir:99 107 LGNPIQYQDDDKD--VLEAIEAFND-----LNDVESHNRSLGLDLSIYGKAYELMIRNQ-DDET-RLYKSDAMSTFVIYD 177 (511) T ss_pred cccCceeecCchH--HHHHHHHHHh-----hcCHhHHHHHHHHHHHhcCeeEEEEEeCC-CCce-EEEEEccceeEEEEc Confidence 5556655322211 1122333332 12345667778889999999999988874 4554 577788988888777 Q ss_pred cC--cceEEEEE----eecC----C---eEEEEcceeeEeeccCC--------------------------CCCccccCH Q lcl|Aclame:pro 133 DN--HEIVYTFT----DMLT----A---KQVKCFAHDVIHWKFFS--------------------------HDTILGRSP 173 (406) Q Consensus 133 ~~--g~~~~~~~----~~~~----g---~~~~~~~~~vih~r~~~--------------------------~~~~~G~s~ 173 (406) +. +.+.+.+. .... + ....+.++.+.+++... .+...|.|. T Consensus 178 ~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd 257 (511) T protein:vir:99 178 NTIERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGD 257 (511) T ss_pred CCCCCceEEEEEEEEeeecccCccceEEEEEEEeCCcEEEEEecCCccccccccccccccCCCCccceEEecCCCCCCCc Confidence 54 23322111 1111 0 01134455555543110 012357888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc--cccCceeeccCCceeeeccCCh Q lcl|Aclame:pro 174 LLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG--SVGGSPLVFDSTMEYTPLEIDT 251 (406) Q Consensus 174 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g--~~~~~~~vl~~g~~~~~l~~~~ 251 (406) ++.+...++..+.+.....+.+...+.|-.++......++++....++.-.-.... ...+...-..+|.+++.++... T Consensus 258 ~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 337 (511) T protein:vir:99 258 YEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQY 337 (511) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhchhhhhccCcccCchhhcccccccceecccccccccccccCCCCcceeEEeecC Confidence 88888888766666655555555555565555443334433333322210000000 0001112234566676666555 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCHHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccC-- Q lcl|Aclame:pro 252 NVLQLITSNNFSTAQIAKALRVPSYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLN-- 316 (406) Q Consensus 252 ~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~-- 316 (406) ....+....+...+.|+..-++|..-.+. .++-|. .....+..+..+|.-.++.|...+...--. T Consensus 338 ~~~~~e~~~~~L~~~I~~~s~~P~~~~~~~~gn~Sg~Alk~~~~~l~~ka~~k~~~~~~~l~~~~~li~~~~~~~~~~~~ 417 (511) T protein:vir:99 338 DVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDV 417 (511) T ss_pred CHHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc Confidence 55666677788888899999998755432 222211 122233444455555555555544432211 Q ss_pred ccchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccC-ccc--hhhccccccccC Q lcl|Aclame:pro 317 DKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLN-YVF--LDKKEEYQDKVG 391 (406) Q Consensus 317 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n-~~~--~~~~~~~~~~~~ 391 (406) ..+...+.+.| .+..+..+.++.+.++. |+++.--++++++.-+-+....+++---.. ..+ ............ T Consensus 418 ~~~~~~i~i~f~~~~p~n~~e~~~~~~kl~--GiiS~et~l~~l~~v~D~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~ 495 (511) T protein:vir:99 418 SKDFNTVRYVYNRNLPKSLIEELKAYIDSG--GKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKNMYQDPRNIN 495 (511) T ss_pred ccccccceEEeCCCCCcCHHHHHHHHHHHh--ccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhcccccCCCCC Confidence 11112233334 33455667777777764 889998888887432211111111000000 000 000000000000 Q ss_pred cccCCCccCCCCCCC Q lcl|Aclame:pro 392 IKGKGGEVNAEEDKS 406 (406) Q Consensus 392 ~~~~gg~~~~~~~~~ 406 (406) .....+++++++|+. T Consensus 496 ~~~~~~~~~~~~d~~ 510 (511) T protein:vir:99 496 DDEQDDSTKDSIDKK 510 (511) T ss_pred CCCCCCCCcCccccc Confidence 011111111111111 No 173 >protein:vir:80959 Length: 499 # NCBI annotation: gp3 # Family: family:all:898 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468389;genbank:gi:157324963;genbank:GeneID:5601394 Probab=98.27 E-value=1.9e-06 Score=51.99 Aligned_cols=375 Identities=12% Similarity=0.059 Sum_probs=176.0 Q ss_pred CcccccccC----CCCcch----h---hHHHhhcCCccccc----------chhhhhccHHHHHHHHHHHHhhccceeEE Q lcl|Aclame:pro 1 MSFFQPLGT----SKVSYD----D---YISSVLAGDVSQKY----------LGVSALKNSDILTATSIIAGDIARFPLVK 59 (406) Q Consensus 1 M~~f~~~~~----~~~~~~----~---~~~~~~~~~~~~~~----------~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 59 (406) |+..+.+.. ...+.. . .+..+..|....-. .....+...-....++..|+-+..=|..+ T Consensus 16 ~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~~~s~n~~~~iv~~~a~~l~~ep~~i 95 (499) T protein:vir:80 16 MGLLKSLKDVTDHKKVNANDEDYKYIDMWKRLYQGNYAEWHNLNYEHNGNPVNRRQLSMNLPKVTAKYMSKLLFNEKVKI 95 (499) T ss_pred hccccchhhhhcCCCCcCCHHHHHHHHHHHHHhcCCcchhhccccccCCCccccceeecchHHHHHHHHHHhhhCCcceE Confidence 444322111 111111 1 12223333211100 00111222333455666666665555544 Q ss_pred EecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEE Q lcl|Aclame:pro 60 KDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVY 139 (406) Q Consensus 60 ~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~ 139 (406) .-.+ + .....+..++. ......-+..++...+..|.+|+.+..|.. |++. +..++|..+-+...+.+.+.. T Consensus 96 ~~~d-~-~~~e~l~~~~~-----~n~f~~~~~~~~~~a~~~G~~~~~~~~D~~-~~~~-i~~v~a~~~~Pi~~d~~~~~~ 166 (499) T protein:vir:80 96 NIDD-E-TAEEFVLNVLK-----TNGFTKNMERYIEYGEAMGGFVIKVYHDGN-KNVK-VSFATADCMYPLSNDSENVDE 166 (499) T ss_pred eeCC-H-HHHHHHHHHHh-----hccHHHHHHHHHHHHhhcCcEEEEEEECCC-CcEE-EEEEcCCceEEEEecCCCeEE Confidence 3222 1 11122222232 233456667778888889999999988754 5543 677788877776555553311 Q ss_pred EE---EeecC-----------------------------------CeEEEE----------------cceeeEeeccCC- Q lcl|Aclame:pro 140 TF---TDMLT-----------------------------------AKQVKC----------------FAHDVIHWKFFS- 164 (406) Q Consensus 140 ~~---~~~~~-----------------------------------g~~~~~----------------~~~~vih~r~~~- 164 (406) .. ..... |..+.+ ..--+.|||.+- T Consensus 167 ~~f~~~~~~~~~~y~~lE~h~~~~~~~~~y~I~n~~~~~~~~~~lG~~v~l~~~~~~~~~~~~~~~~~~p~f~~~~~~~~ 246 (499) T protein:vir:80 167 CLIANSFHKNNKYYKLLEWNEWKGEKEEVYTVTTELYQSDDPNELGGKVSLKLLFNDIEPVVPLPSLTRPTFIYIKPNIA 246 (499) T ss_pred EEEEEEEeecCeEEEEEEEEEecccceeeEEEEEEEEeccCccccCcccchhhhccCcCCceeecCCCccceEeecCCcc Confidence 10 00000 111100 000134454321 Q ss_pred ----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEe-----ecCCCCHHHHHHHHHHHHHHhccccc-Cc Q lcl|Aclame:pro 165 ----HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTM-----KGAQLSGDARQRARQEFEKMREGSVG-GS 234 (406) Q Consensus 165 ----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~-----~~~~~~~e~~~~~~~~~~~~~~g~~~-~~ 234 (406) ...+.|+|.+.-+...++..+.......+-++.|. ...++. ...+.+.+... . +..+.. -+ T Consensus 247 N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~~~~-~~i~v~~~~l~~~~~~~g~~~~----~----~~~~~~~~~ 317 (499) T protein:vir:80 247 NNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKLGK-KKVLVPSSFVKTAVNLDGSTTQ----Y----FDSTDEAFF 317 (499) T ss_pred ccccCCCccCCchHhhHHHHHHHHHHHHHHHHHHHHhcc-cceecchhhhhccCCCCCCccc----C----CCcccceee Confidence 12467999999999999988777776666676643 323221 11111100000 0 000000 00 Q ss_pred ee-e--ccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccch-hHHH-------------HHHHHHHH Q lcl|Aclame:pro 235 PL-V--FDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQ-SVAQ-------------LMEDYVTN 297 (406) Q Consensus 235 ~~-v--l~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~-n~~~-------------~~~~~~~~ 297 (406) .. . -+++-.++.++.....-++.+..+...++|....|+++..+|...++. +..+ ..+..++. T Consensus 318 ~~~~~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~fg~~~~g~~TAtei~s~~~~l~~~~~~~~~~~~~ 397 (499) T protein:vir:80 318 LYQGEQDDNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLKTATEVVSEKSETYQTKNSHSQLIEQ 397 (499) T ss_pred EeeccCCCCcCceeEecCcCChHHHHHHHHHHHHHHHHhcCCChhhcCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHH Confidence 00 1 122335777777777777888888899999999999999998654432 1111 11223333 Q ss_pred HHHHHHHHHHHHHHhhccC---ccchhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHh-CCCCCCCCCCCee Q lcl|Aclame:pro 298 DLPFYFDAITSELGLKTLN---DKDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVEL-GKQKSTDPNMDRY 371 (406) Q Consensus 298 ~i~P~~~~ie~~l~~~l~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~-g~~p~~~~~gd~~ 371 (406) +|..+++.|-...+..... ..+...+.+.|+ +..+..+.++...+++.+|+|+.-.++... |.+ ++.+.+- T Consensus 398 ~l~~l~~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~~~~Gi~S~et~l~~~~~~~---d~ea~~e 474 (499) T protein:vir:80 398 GIKEMIVSILEVGKLIKAYDGDTVELDTITVDFDDSIAQDEDTTINRYTTAKNQGMIPLKIALQRAWNIT---EAEADEW 474 (499) T ss_pred HHHHHHHHHHHHHHHhccccCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHhhcCCCC---hHHHHHH Confidence 4444444443332211111 112223444453 455677888889999999999998887653 432 2222211 Q ss_pred eeccCccchhhccccccccCcccCCCccCCCC Q lcl|Aclame:pro 372 QSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEE 403 (406) Q Consensus 372 ~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~ 403 (406) ... +. .+.......++.+|-.+++| T Consensus 475 l~~-----i~--~E~~~~~~~~d~~g~~ge~e 499 (499) T protein:vir:80 475 AEM-----LA--KEKQAEIPNNDMTGIFGEEE 499 (499) T ss_pred HHH-----HH--HHhhcCCCCCCccccCCCCC Confidence 110 11 11111122223333333333 No 174 >protein:vir:106639 Length: 481 # NCBI annotation: ORF003 # Family: family:all:125 # MgeID: mge:1557 # MgeName: 187 # Cross-refs: genbank:acc:YP_239490;genbank:gi:66395218;genbank:GeneID:4555793 Probab=98.23 E-value=2.2e-06 Score=51.56 Aligned_cols=388 Identities=11% Similarity=0.078 Sum_probs=170.0 Q ss_pred CcccccccCCC-------------Ccc-----------------hhhHHHhhcCCcccccch-----------hhhhccH Q lcl|Aclame:pro 1 MSFFQPLGTSK-------------VSY-----------------DDYISSVLAGDVSQKYLG-----------VSALKNS 39 (406) Q Consensus 1 M~~f~~~~~~~-------------~~~-----------------~~~~~~~~~~~~~~~~~~-----------~~a~~~~ 39 (406) |+.++-+.... ... -..+..+..|........ ..-+.++ T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~yY~g~~~~i~~~~~~~~~~~~~~~~ki~~n 85 (481) T protein:vir:10 6 INNINTKFSPLANDDFVVSDLAELLKEENLRNFISRHQTEQVPRLEMLESYYLNRNTDILAGERRLQKYGDKADHRAVHN 85 (481) T ss_pred eehhchhcccccCceeeeecchhhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCccccccccccccceeecc Confidence 55443211100 000 001111121211100000 0012233 Q ss_pred HHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEE Q lcl|Aclame:pro 40 DILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQF 119 (406) Q Consensus 40 ~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l 119 (406) -...+|+..+.-+..-|+.+...+. .....+..++.. .....+...+....+.+|.+|+++..+ .+|++ .+ T Consensus 86 ~~~~ivd~~~~~l~g~~~~~~~~d~--~~~~~l~~~~~~-----n~~~~~~~~~~~~~~~~G~~~~~~~~d-~dg~~-~i 156 (481) T protein:vir:10 86 YAKYVSRFIVGYLTGNPITITHQDN--QTNDKIIELNDL-----NDADEVNSDLALNLSIYGRAYEIVYRD-FEDRD-TF 156 (481) T ss_pred hHHHHHHHHHhhhccCCceEecCCh--hHHHHHHHHHHh-----cChhHHHHHHHHHHHhcCeEEEEEEeC-CCCeE-EE Confidence 3445666666666666664432221 122334444432 245578888999999999999988887 45666 47 Q ss_pred eecCCeeEEEEEccCc--ceEEE---E-EeecCCeE----EEEcceeeEeeccCC---------------------CCCc Q lcl|Aclame:pro 120 QFYRPSETTVEETDNH--EIVYT---F-TDMLTAKQ----VKCFAHDVIHWKFFS---------------------HDTI 168 (406) Q Consensus 120 ~~l~p~~~~~~~~~~g--~~~~~---~-~~~~~g~~----~~~~~~~vih~r~~~---------------------~~~~ 168 (406) ..++|..+.+.+++.. .+... + .....+.. ..+.++.+.+++... .+.. T Consensus 157 ~~~~p~~~~~v~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~ 236 (481) T protein:vir:10 157 KVLDPKSTFVVYDQTLDKKVVAGVRYFEKQDKDKVPVQHVEVYTTDKIYYIEIKGGTYHRVEEVEHYYNDVPIIEYLNDQ 236 (481) T ss_pred EEEcccceEEEEcCCCCCceEEEEEEEEEeeCCCceEEEEEEEecCeEEEEEecCCceeecccccccCCceeEEEeecCC Confidence 7889999888877543 22221 1 11111111 133445555543110 0123 Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeecc Q lcl|Aclame:pro 169 LGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLE 248 (406) Q Consensus 169 ~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~ 248 (406) .|.|.++.+...++..+.........+...+.|..++.......++..+.++..-.-.. .........+.+.+++-+. T Consensus 237 ~g~~~~~~v~~lida~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~ 314 (481) T protein:vir:10 237 FKQGDFENVIALIDLYDSAQSDTANYMTDLNDAMLAIIGNVDLDSEDAKAFRDANMIHL--EPGTNANGSEGKAEVKYVY 314 (481) T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHhcCceeEeecCcCCCccchhhhhhccceec--cccccccCCCCCcceeEEe Confidence 47777777666666555554444444555556666665443444444444333111000 0000011122344555555 Q ss_pred CChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc-ccchhH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 249 IDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN-SPNQSV------------AQLMEDYVTNDLPFYFDAITSELGLKTL 315 (406) Q Consensus 249 ~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~-~~~~n~------------~~~~~~~~~~~i~P~~~~ie~~l~~~l~ 315 (406) .......+.+..+...+.|+..-++|....+.. ++-|.. .+..+..+...+.-+++.+...++..-. T Consensus 315 ~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~ 394 (481) T protein:vir:10 315 KQYDVAGVEAYKKRLQNDIHKYTNTPDLNDEQFSGVQSGESMKYKLFGLEQVRAIKERLFKKGLMKRYKLLLNNVNLTGL 394 (481) T ss_pred ecCCHHHHHHHHHHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC Confidence 444556667778888889999999997666532 221111 1111222233333333333333322111 Q ss_pred Cccchhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeecc-CccchhhccccccccCc Q lcl|Aclame:pro 316 NDKDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSL-NYVFLDKKEEYQDKVGI 392 (406) Q Consensus 316 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~-n~~~~~~~~~~~~~~~~ 392 (406) ...+...+.+.|. ...+..+.++.+.++ .|+++...+.+++++-.-+.+..+++---. ...+.. .....+... T Consensus 395 ~~~~~~~i~v~f~~~~~~~~~~~a~~~~kl--~g~is~et~~~~l~~i~d~~~E~~ri~~E~~~~~~~~--~~~~~~~~~ 470 (481) T protein:vir:10 395 KQHNYAELTITFTPNLPKSMMESINAFNAL--SGGVSESTRLSLLDFIDNPKEELEKMQEEEAQREKQA--DKRGYGEAF 470 (481) T ss_pred CccccceeeEEeCCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHHHHHHHhhh--hhccCCccC Confidence 1112222334442 333556667777666 478888778887765221111111110000 000000 000001111 Q ss_pred ccCCCccCCCCC Q lcl|Aclame:pro 393 KGKGGEVNAEED 404 (406) Q Consensus 393 ~~~gg~~~~~~~ 404 (406) +. +++.++.++ T Consensus 471 ~~-~~~~dd~~g 481 (481) T protein:vir:10 471 EN-HLNVDDSNG 481 (481) T ss_pred CC-CCCCCCCCC Confidence 11 111122222 No 175 >protein:vir:102602 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1661 # MgeName: Llij # Cross-refs: genbank:acc:YP_654999;genbank:gi:109392189;genbank:GeneID:4157224 Probab=98.22 E-value=2e-06 Score=51.82 Aligned_cols=377 Identities=12% Similarity=-0.000 Sum_probs=166.4 Q ss_pred Ccc------cccccC---CCCcchhhHHHhhcCCccc-----ccchhh-h----hccHHHHHHHHHHHHhhccceeEEEe Q lcl|Aclame:pro 1 MSF------FQPLGT---SKVSYDDYISSVLAGDVSQ-----KYLGVS-A----LKNSDILTATSIIAGDIARFPLVKKD 61 (406) Q Consensus 1 M~~------f~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~-a----~~~~~v~~~i~~ia~~ia~~~~~~~~ 61 (406) |.= .+.+.. ...+.-..+..+..|.... ...+.. . ..+.-..-+|+..+..+-.-|+.+.. T Consensus 1 ~~~~t~~~~~~~l~~~~~~~~~r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~~~~~~~ 80 (456) T protein:vir:10 1 MTASTPAEWLPVLTKRIDDGMSRVRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVGG 80 (456) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhcCcccChhhhhhhhhhhcchHHHHHHHHHhhhccCCeecCC Confidence 221 110000 0001111122222222111 010100 0 11122344566666666666776532 Q ss_pred cCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc--eEE Q lcl|Aclame:pro 62 VNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE--IVY 139 (406) Q Consensus 62 ~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~--~~~ 139 (406) .+ +......+..++. -| ....+...+..+.+.+|.+|.++..+ ..|.+. +..++|..+.+.++.... +.. T Consensus 81 ~~-d~~~~~~~~~i~~--~N---~~d~~~~~~~~~a~i~G~ay~~v~~d-~~g~~~-i~~~~p~~~~~i~d~~~~~~~~~ 152 (456) T protein:vir:10 81 SA-DSDLALRARRIWR--DN---RMDSVCKQWVKYGLDFGESYLTCWRR-DDGTAT-ITADSPETMVVSVDPLQPWRIRA 152 (456) T ss_pred CC-CcchHHHHHHHHH--hc---ChhhHHHHHHHHHhhcCeeEEEEeeC-CCCceE-EEEEccceeEEEEcCCCCcceEE Confidence 21 1111223344443 23 23455677889999999999988776 446553 677888888877765431 110 Q ss_pred --EEEeecCCeE----------------------------EEEccee------eEeeccC----CCCCccccCHHHHHHH Q lcl|Aclame:pro 140 --TFTDMLTAKQ----------------------------VKCFAHD------VIHWKFF----SHDTILGRSPLLSLGD 179 (406) Q Consensus 140 --~~~~~~~g~~----------------------------~~~~~~~------vih~r~~----~~~~~~G~s~~~~~~~ 179 (406) .++...++.. ....... .-|+-.. +.+...|+|.++.... T Consensus 153 ~i~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~g~gd~e~vi~ 232 (456) T protein:vir:10 153 AMRWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHID 232 (456) T ss_pred EEEEEEecCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEEEecCCCCCchhhhhHH Confidence 0111111100 0000000 0010000 0122358888887777 Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEeecCC---CCHHHHHH--HHHHHHHHhcccccCceeeccCCceeeeccCChhHH Q lcl|Aclame:pro 180 EIDLQTGGINTLIKFFKDGFSSGILTMKGAQ---LSGDARQR--ARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVL 254 (406) Q Consensus 180 ~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~---~~~e~~~~--~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~ 254 (406) .++..+.+..-........+.|..++..... ..++.-+. ....|+.. .+.++.++++.++.++....- . T Consensus 233 liDa~~~~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~q~~~~~~-~ 306 (456) T protein:vir:10 233 IINRINRAELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEAA-----PGALWELPPGVDIWESQANDF-T 306 (456) T ss_pred HHHHHHHHHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhhh-----ccccccCCCCcceEEecccCh-h Confidence 7766655444333333333334333321110 01111111 11122221 234666788999888765322 3 Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh----------ccCccchhhhh Q lcl|Aclame:pro 255 QLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSELGLK----------TLNDKDRRLYH 324 (406) Q Consensus 255 ~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~----------l~~~~~~~~~~ 324 (406) .+.+..+..+.+|+++=++|+..+|....+.+.+. . .+....+.-.+...+..|... +....+...+. T Consensus 307 ~~~~~l~~~i~~~~~~s~~p~~~~~~~~~N~Sg~A-i-~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~g~~~~~~~~ 384 (456) T protein:vir:10 307 PMLSAIKEHIRQLSSATKTPLPMLMPDSANQSAEG-A-HNIEKGFLFKCEDRLSIAKIGLEAILVKALQIEGESVEDTVD 384 (456) T ss_pred HHHHHHHHHHHHHHhccCCChHHhcccccChHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccee Confidence 47888899999999999999999986432222211 1 111111111222222222111 11111111223 Q ss_pred hhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccc-cccccCcccCCCccCC Q lcl|Aclame:pro 325 IEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEE-YQDKVGIKGKGGEVNA 401 (406) Q Consensus 325 ~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~-~~~~~~~~~~gg~~~~ 401 (406) +.| ....+..+.++++.++++.|+++..-+++++|+.+-+-+. ...+...+ .....++..+.++.|+ T Consensus 385 v~w~~~~~~~~~~~ada~~kl~~~gi~~~~~~~~~lg~~~~~i~~----------~e~er~~~e~~~~~~~~~~~~~~~~ 454 (456) T protein:vir:10 385 VSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQIKQ----------DDLDRAREQITLFAGNPVQRPQEDG 454 (456) T ss_pred EEecCCCCcCHHHHHHHHHHHHHcCCChHHHHHhhCCCCHHHHHH----------HHHHHHHHHHHHHhhhhhhcCCCCC Confidence 333 2233556778888889999999988888888886521000 00111111 1111122233333333 Q ss_pred CC Q lcl|Aclame:pro 402 EE 403 (406) Q Consensus 402 ~~ 403 (406) .. T Consensus 455 ~~ 456 (456) T protein:vir:10 455 SR 456 (456) T ss_pred CC Confidence 33 No 176 >protein:vir:105819 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1636 # MgeName: PMC # Cross-refs: genbank:acc:YP_655764;genbank:gi:109522087;genbank:GeneID:4157627 Probab=98.22 E-value=2e-06 Score=51.82 Aligned_cols=377 Identities=12% Similarity=-0.000 Sum_probs=166.4 Q ss_pred Ccc------cccccC---CCCcchhhHHHhhcCCccc-----ccchhh-h----hccHHHHHHHHHHHHhhccceeEEEe Q lcl|Aclame:pro 1 MSF------FQPLGT---SKVSYDDYISSVLAGDVSQ-----KYLGVS-A----LKNSDILTATSIIAGDIARFPLVKKD 61 (406) Q Consensus 1 M~~------f~~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~-a----~~~~~v~~~i~~ia~~ia~~~~~~~~ 61 (406) |.= .+.+.. ...+.-..+..+..|.... ...+.. . ..+.-..-+|+..+..+-.-|+.+.. T Consensus 1 ~~~~t~~~~~~~l~~~~~~~~~r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~~~~~~~ 80 (456) T protein:vir:10 1 MTASTPAEWLPVLTKRIDDGMSRVRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVGG 80 (456) T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhcCcccChhhhhhhhhhhcchHHHHHHHHHhhhccCCeecCC Confidence 221 110000 0001111122222222111 010100 0 11122344566666666666776532 Q ss_pred cCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc--eEE Q lcl|Aclame:pro 62 VNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE--IVY 139 (406) Q Consensus 62 ~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~--~~~ 139 (406) .+ +......+..++. -| ....+...+..+.+.+|.+|.++..+ ..|.+. +..++|..+.+.++.... +.. T Consensus 81 ~~-d~~~~~~~~~i~~--~N---~~d~~~~~~~~~a~i~G~ay~~v~~d-~~g~~~-i~~~~p~~~~~i~d~~~~~~~~~ 152 (456) T protein:vir:10 81 SA-DSDLALRARRIWR--DN---RMDSVCKQWVKYGLDFGESYLTCWRR-DDGTAT-ITADSPETMVVSVDPLQPWRIRA 152 (456) T ss_pred CC-CcchHHHHHHHHH--hc---ChhhHHHHHHHHHhhcCeeEEEEeeC-CCCceE-EEEEccceeEEEEcCCCCcceEE Confidence 21 1111223344443 23 23455677889999999999988776 446553 677888888877765431 110 Q ss_pred --EEEeecCCeE----------------------------EEEccee------eEeeccC----CCCCccccCHHHHHHH Q lcl|Aclame:pro 140 --TFTDMLTAKQ----------------------------VKCFAHD------VIHWKFF----SHDTILGRSPLLSLGD 179 (406) Q Consensus 140 --~~~~~~~g~~----------------------------~~~~~~~------vih~r~~----~~~~~~G~s~~~~~~~ 179 (406) .++...++.. ....... .-|+-.. +.+...|+|.++.... T Consensus 153 ~i~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~g~gd~e~vi~ 232 (456) T protein:vir:10 153 AMRWWRDLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHID 232 (456) T ss_pred EEEEEEecCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEEEecCCCCCchhhhhHH Confidence 0111111100 0000000 0010000 0122358888887777 Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEeecCC---CCHHHHHH--HHHHHHHHhcccccCceeeccCCceeeeccCChhHH Q lcl|Aclame:pro 180 EIDLQTGGINTLIKFFKDGFSSGILTMKGAQ---LSGDARQR--ARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVL 254 (406) Q Consensus 180 ~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~---~~~e~~~~--~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~ 254 (406) .++..+.+..-........+.|..++..... ..++.-+. ....|+.. .+.++.++++.++.++....- . T Consensus 233 liDa~~~~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~q~~~~~~-~ 306 (456) T protein:vir:10 233 IINRINRAELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEAA-----PGALWELPPGVDIWESQANDF-T 306 (456) T ss_pred HHHHHHHHHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhhh-----ccccccCCCCcceEEecccCh-h Confidence 7766655444333333333334333321110 01111111 11122221 234666788999888765322 3 Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhh----------ccCccchhhhh Q lcl|Aclame:pro 255 QLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSELGLK----------TLNDKDRRLYH 324 (406) Q Consensus 255 ~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~----------l~~~~~~~~~~ 324 (406) .+.+..+..+.+|+++=++|+..+|....+.+.+. . .+....+.-.+...+..|... +....+...+. T Consensus 307 ~~~~~l~~~i~~~~~~s~~p~~~~~~~~~N~Sg~A-i-~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~g~~~~~~~~ 384 (456) T protein:vir:10 307 PMLSAIKEHIRQLSSATKTPLPMLMPDSANQSAEG-A-HNIEKGFLFKCEDRLSIAKIGLEAILVKALQIEGESVEDTVD 384 (456) T ss_pred HHHHHHHHHHHHHHhccCCChHHhcccccChHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccee Confidence 47888899999999999999999986432222211 1 111111111222222222111 11111111223 Q ss_pred hhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccc-cccccCcccCCCccCC Q lcl|Aclame:pro 325 IEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEE-YQDKVGIKGKGGEVNA 401 (406) Q Consensus 325 ~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~-~~~~~~~~~~gg~~~~ 401 (406) +.| ....+..+.++++.++++.|+++..-+++++|+.+-+-+. ...+...+ .....++..+.++.|+ T Consensus 385 v~w~~~~~~~~~~~ada~~kl~~~gi~~~~~~~~~lg~~~~~i~~----------~e~er~~~e~~~~~~~~~~~~~~~~ 454 (456) T protein:vir:10 385 VSFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQIKQ----------DDLDRAREQITLFAGNPVQRPQEDG 454 (456) T ss_pred EEecCCCCcCHHHHHHHHHHHHHcCCChHHHHHhhCCCCHHHHHH----------HHHHHHHHHHHHHhhhhhhcCCCCC Confidence 333 2233556778888889999999988888888886521000 00111111 1111122233333333 Q ss_pred CC Q lcl|Aclame:pro 402 EE 403 (406) Q Consensus 402 ~~ 403 (406) .. T Consensus 455 ~~ 456 (456) T protein:vir:10 455 SR 456 (456) T ss_pred CC Confidence 33 No 177 >protein:vir:96839 Length: 474 # NCBI annotation: ORF008 # Family: family:all:125 # MgeID: mge:1642 # MgeName: EW # Cross-refs: genbank:acc:YP_240152;genbank:gi:66395815;genbank:GeneID:5133180 Probab=98.22 E-value=2.4e-06 Score=51.39 Aligned_cols=370 Identities=10% Similarity=-0.016 Sum_probs=169.5 Q ss_pred Cc--------ccccccC---CCCcchhhHHHhhcCCcc-------------c-ccchhhhhccHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 1 MS--------FFQPLGT---SKVSYDDYISSVLAGDVS-------------Q-KYLGVSALKNSDILTATSIIAGDIARF 55 (406) Q Consensus 1 M~--------~f~~~~~---~~~~~~~~~~~~~~~~~~-------------~-~~~~~~a~~~~~v~~~i~~ia~~ia~~ 55 (406) |. +++++-. .....-..+..+..|... . ...+..-+.++-...+|+..+.-+-.- T Consensus 20 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~~~l~g~ 99 (474) T protein:vir:96 20 IKPKYETQEEMIIRLINDHKPKIDDITVGERYYNHDPDVLRLAPKLDNKGEIDPLKPDWRMFTNYHQNLVDQKVAYAVAN 99 (474) T ss_pred hhhccCChHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhccchhcccccccccccchhcccchHHHHHHhhhhhhccc Confidence 00 0111000 000000111111111110 0 000011122333445566666666556 Q ss_pred eeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccC- Q lcl|Aclame:pro 56 PLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN- 134 (406) Q Consensus 56 ~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~- 134 (406) |+.+.-.+ + .....+..++. | ........+....+.+|.+|.++..+. +|++. +..++|..+.+.+++. T Consensus 100 p~~~~~~d-~-~~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~~y~d~-~~~~~-i~~~~p~~~~~v~d~~~ 169 (474) T protein:vir:96 100 PVTFSSDD-D-KSLKTIQEVLN---H---KWDDKLVDILTAASNKGIEWLQPYIDE-NGEFK-TFRVPAEQAIPIWTNKE 169 (474) T ss_pred CceeecCc-h-HHHHHHHHHHh---c---CHHHHHHHHHHHHHhcCeeEEEEEecC-CCceE-EEEEcccceEEEEcCCC Confidence 66543222 2 12223333332 1 334556667788899999999888874 46654 7788999988887653 Q ss_pred -cceEEEE--Eeec-CCeEEEEcceeeEeecc--------------------------CC---------CCCccccCHHH Q lcl|Aclame:pro 135 -HEIVYTF--TDML-TAKQVKCFAHDVIHWKF--------------------------FS---------HDTILGRSPLL 175 (406) Q Consensus 135 -g~~~~~~--~~~~-~g~~~~~~~~~vih~r~--------------------------~~---------~~~~~G~s~~~ 175 (406) +.+...+ +... ......+....+.+++. ++ .+...|.|.++ T Consensus 170 ~~~~~~~vr~~~~~~~~~~~~yt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~nn~~g~sd~e 249 (474) T protein:vir:96 170 RDTLKAFIRYYRLDGAERVEYWTDSDVTYYEYQDGILIPDYYHGEEHIQSHYYVGNKRVSWGRVPFIPFKNNPQEMSDLF 249 (474) T ss_pred CCceEEEEEEEeecCceEEEEEeCCeEEEEEecCCceeeccccccccccccccccccccCCCceeEEEeccCCCCCCcHH Confidence 3322111 1111 11111222333333211 00 01234788888 Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeecc-CCceeeeccCChhHH Q lcl|Aclame:pro 176 SLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFD-STMEYTPLEIDTNVL 254 (406) Q Consensus 176 ~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~-~g~~~~~l~~~~~d~ 254 (406) .+...++..+.+.....+.+...+.|-.++...... +.+.+.. .. ...+++.++ .|.+++.++...... T Consensus 250 ~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~---~~~~~~~----~~---~~~~~i~~~~~~~~~~~l~~~~~~~ 319 (474) T protein:vir:96 250 MYKTIIDAMDKRLSDTQNTFDESTELIYILKGYEGQ---DLDEFMR----NL---KYYKAINVDGDGSGVDTIQIEVPVQ 319 (474) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccceeeeecCCcc---cccchhh----hh---hcCceEEecCCCCceeEEeecCChH Confidence 888888877776666666666666676555432211 1111111 11 123455554 456666666555555 Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchh Q lcl|Aclame:pro 255 QLITSNNFSTAQIAKALRVPSYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRR 321 (406) Q Consensus 255 ~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~ 321 (406) .+....+...+.|+..-++|..-.+. .++-|. .....+.++...|.-+++.|...+.. ..+.. T Consensus 320 ~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~~i~~~~~~----~~~~~ 395 (474) T protein:vir:96 320 SSKEYLDMLRDYVIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYKL----NIKVQ 395 (474) T ss_pred HHHHHHHHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----Ccccc Confidence 66777788889999999998655432 222111 11233344555555555555444321 11222 Q ss_pred hhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhc-c---ccccccCcccC Q lcl|Aclame:pro 322 LYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKK-E---EYQDKVGIKGK 395 (406) Q Consensus 322 ~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~-~---~~~~~~~~~~~ 395 (406) .+.+.| .+..+.. +.+..+.+.|+++...++++++. ++++... ..-+... . ....+...... T Consensus 396 ~i~i~f~~~~p~~~~---e~~~~~~~ag~iS~et~~~~~~~--v~d~~~E-------~~ri~~E~~e~~~~~~~~~~~~~ 463 (474) T protein:vir:96 396 DVEITFNFNVMVNEL---EQSQIGVQSQYLSKETVVTNHPW--VDDPVAE-------LERIEQDNIDFNKQLPPLEGDAN 463 (474) T ss_pred eeeEEeccCCCcCHH---HHHHHHHhcCCCchHHHHHhCCC--CCCHHHH-------HHHHHHHHHHHHhcccccccccc Confidence 233344 2222333 33344567899999999888743 2221110 0011100 0 00111112223 Q ss_pred CCccCCCCCCC Q lcl|Aclame:pro 396 GGEVNAEEDKS 406 (406) Q Consensus 396 gg~~~~~~~~~ 406 (406) |+.+|++++.| T Consensus 464 ~~~~d~~~e~~ 474 (474) T protein:vir:96 464 GRAQDNESETN 474 (474) T ss_pred cccCCCcccCC Confidence 34444444444 No 178 >protein:vir:97336 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1666 # MgeName: 52A # Cross-refs: genbank:acc:YP_240606;genbank:gi:66396273;genbank:GeneID:5133692 Probab=98.16 E-value=3.3e-06 Score=50.64 Aligned_cols=372 Identities=11% Similarity=0.026 Sum_probs=168.0 Q ss_pred Cccc----cccc---CCCCcchhhHHHhhcCCcc-----c---------ccchhhhhccHHHHHHHHHHHHhhccceeEE Q lcl|Aclame:pro 1 MSFF----QPLG---TSKVSYDDYISSVLAGDVS-----Q---------KYLGVSALKNSDILTATSIIAGDIARFPLVK 59 (406) Q Consensus 1 M~~f----~~~~---~~~~~~~~~~~~~~~~~~~-----~---------~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 59 (406) +-+. .++- +.....-..+..+..|... . ...+..-+.++-..-+|+..+.-+-.-|+.+ T Consensus 42 ~~~~~~~i~~~i~~~~~~~~r~~~l~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~g~p~~~ 121 (492) T protein:vir:97 42 PETLEEMIVRYIKQHLEKLPEISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKPIAF 121 (492) T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccccccccccccccccccccccchHHHHHHHHhhhhcccCcee Confidence 0010 0000 0000000111122222100 0 0000011123334456666666665666654 Q ss_pred EecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccC--cce Q lcl|Aclame:pro 60 KDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN--HEI 137 (406) Q Consensus 60 ~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~--g~~ 137 (406) ...+.+ ....+..++. | ...+....+..+.+.+|.||.++..+. .|++ .+..++|..+.+.+++. +.+ T Consensus 122 ~~~d~~--~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~a~~~v~~d~-dg~~-~~~~~~p~~~~~i~d~~~~~~~ 191 (492) T protein:vir:97 122 KHTDDE--VVKRIDEVLG---N---RFDDKLHSVLTGASNKGIEWLHPYLDE-EGEF-KLFRVPAEQGIPIWTDKEHEEL 191 (492) T ss_pred ccCchH--HHHHHHHHHh---c---cHHHHHHHHHHHHhhcCeEEEEEEecC-CCce-EEEEEcccceEEEEcCCCCCce Confidence 322211 1122222221 2 234566678889999999999988874 4554 47778999988887643 333 Q ss_pred EEEE--EeecCCeE-EEEcceeeEeecc----------------------CCC---------CCccccCHHHHHHHHHHH Q lcl|Aclame:pro 138 VYTF--TDMLTAKQ-VKCFAHDVIHWKF----------------------FSH---------DTILGRSPLLSLGDEIDL 183 (406) Q Consensus 138 ~~~~--~~~~~g~~-~~~~~~~vih~r~----------------------~~~---------~~~~G~s~~~~~~~~i~~ 183 (406) .+.+ +....... ..+.+..+.++.. ++. +...|.|.++.+...++. T Consensus 192 ~~~vr~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa 271 (492) T protein:vir:97 192 EAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYKTLIDA 271 (492) T ss_pred EEEEEEEeeccceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecCCCCCCCchHhHHHHHHH Confidence 2221 11111111 1223333333320 000 123478888888888877 Q ss_pred HHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHH Q lcl|Aclame:pro 184 QTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFS 263 (406) Q Consensus 184 ~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~ 263 (406) .+.+.....+.+.....|-.++.... .++...++..+. ..+++.++.+.+.+.+........+....+.. T Consensus 272 ~d~~~S~~~~~~~~~~~~~l~~~g~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L 341 (492) T protein:vir:97 272 YNRRLSDLSNTFKDSNELTYVLKNYD---DQELPEFKRLLR-------YYGAIKVSDNGGVDTIQVEVPVENSKKYLDEL 341 (492) T ss_pred HHHHHHHHHHHHHHhccceeeeecCC---cccchhHHHHHh-------hccceecCCCCcceeEeccCCHHHHHHHHHHH Confidence 77666665666666666655554322 222222222221 12345556665555565554556667777788 Q ss_pred HHHHHHHhcCCHHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhh--c Q lcl|Aclame:pro 264 TAQIAKALRVPSYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEF--D 328 (406) Q Consensus 264 ~~~Ia~~fgvpp~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~--~ 328 (406) .+.|+..-++|..-.+. .++-|. .....+..+...+..+++.|...++.+ .+...+.+.| . T Consensus 342 ~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~----~~~~~i~v~f~~~ 417 (492) T protein:vir:97 342 YQKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIK----GEHKDVDISFNYN 417 (492) T ss_pred HHHHHHHhCCCCCCccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----cccceeeEEecCC Confidence 88888888888644322 121111 112333445555666665555544321 1222233434 3 Q ss_pred ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCC--- Q lcl|Aclame:pro 329 TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDK--- 405 (406) Q Consensus 329 ~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~--- 405 (406) ...+..+.++.+.++ .|+++..-+.++++.-.-+....+++-- + ..+..........++.+++++++ T Consensus 418 ~p~~~~e~a~~~~kl--~G~iS~et~l~~l~~v~d~~~Eleri~~-------E-~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (492) T protein:vir:97 418 KVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQ-------E-QTEYNKQLPNLDDGGADSAQQQERSN 487 (492) T ss_pred CCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHH-------H-HHHHHHhhhccccCCCCCCccccccc Confidence 444566777777776 4889988888887653211111111100 0 00000000011111111111111 Q ss_pred ---C Q lcl|Aclame:pro 406 ---S 406 (406) Q Consensus 406 ---~ 406 (406) + T Consensus 488 ~~~~ 491 (492) T protein:vir:97 488 NKES 491 (492) T ss_pred cccc Confidence 1 No 179 >protein:vir:95806 Length: 440 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1578 # MgeName: SMP # Cross-refs: genbank:acc:YP_950583;genbank:gi:119953778;genbank:GeneID:5076876 Probab=98.15 E-value=3.6e-06 Score=50.44 Aligned_cols=379 Identities=13% Similarity=0.061 Sum_probs=176.4 Q ss_pred ccccccCCCCcchhhHHHhhcCCcccccc---------hhhhhccHHHHHHHHHHHHhhccceeEEEecC-CcccccchH Q lcl|Aclame:pro 3 FFQPLGTSKVSYDDYISSVLAGDVSQKYL---------GVSALKNSDILTATSIIAGDIARFPLVKKDVN-GDIIHDEDI 72 (406) Q Consensus 3 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~-~~~~~~~~~ 72 (406) |...+.+...+.-..+..+..|....... +..-+.++-..-.|+..+.-+-.-|+.+.-.+ +.......+ T Consensus 1 ~~~~~~~~~~~r~~~l~~yy~g~~~~~~~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~~~~~~~~~~~l 80 (440) T protein:vir:95 1 MLAAFLGSQKQRLAILASYAQGDNFSILSGHRRLDDEKADYRVRHKWGGYISSFATGYVIGNPVSIGVMEGGSADQLSTI 80 (440) T ss_pred ChhhHHHHHHHHHHHHHHHhccCCcccccccccccccCCcceeecchHHHHHHhhhhheeccCceEeeCCCccHHHHHHH Confidence 43332222222222222222222110000 00112223334445555555544455543221 111111122 Q ss_pred HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCc--ceEEEE--EeecCCe Q lcl|Aclame:pro 73 NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNH--EIVYTF--TDMLTAK 148 (406) Q Consensus 73 ~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g--~~~~~~--~~~~~g~ 148 (406) ...+ ...........+..+.+.+|.+|.++..+ .+|+|. +..++|..+.+.+++.+ .+.+.+ ....... T Consensus 81 ~~~~-----~~n~~~~~~~~~~~~~~~~G~a~~~~~~d-~~~~~~-i~~~~p~~~~~~~d~~~~~~~~~~i~~~~~~~~~ 153 (440) T protein:vir:95 81 KDIE-----WQNDINALNSDLAFDASVYGRAYEYHFRD-KDKVDR-VVLISPLEMFVIRDLTVEQNIIAAVHLPIYADKV 153 (440) T ss_pred HHHH-----HhcCHhHHHHHHHHHHhhcCeEEEEEEec-CCCceE-EEEEcccceEEEEcCCCCCceEEEEEEEEecCce Confidence 2222 12234456677888999999999998887 446664 67789999988887654 233221 1122222 Q ss_pred EE-EEcceeeEeecc---------------CC---------CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcce Q lcl|Aclame:pro 149 QV-KCFAHDVIHWKF---------------FS---------HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGI 203 (406) Q Consensus 149 ~~-~~~~~~vih~r~---------------~~---------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ 203 (406) .. .+..+.+++++. ++ .+...|.|.++.+...++..+.+.....+..+..+.|-. T Consensus 154 ~~~vyt~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~lida~~~~~s~~~~~~~~~~~~~~ 233 (440) T protein:vir:95 154 NMTVYTKDKVITYKPYSNNSVRLVVDDVKKHSYNDVPVVEWWNNRFRMGDYESEISLIDAYDAGQSDTANYMSDLNDAML 233 (440) T ss_pred EEEEEeCCeEEEEEEecCCccceeecceeeccCceeeEEEeeCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhhccee Confidence 22 234444444321 00 012347788888777777777666666666666666766 Q ss_pred EEeec---CCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc Q lcl|Aclame:pro 204 LTMKG---AQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV 280 (406) Q Consensus 204 ~~~~~---~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~ 280 (406) +++.. ...++++...+++.-.-.... .......+.+.+++.++.......+....+...+.|+..-++|..-.+. T Consensus 234 v~~g~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~ 311 (440) T protein:vir:95 234 LVKGDLDGIKLSPEDAAKMKDANMLFLKT--GISTTGQQTTADASYIYKQYDVNGTEAYKNRLANDIHRFSRIPNLDDDR 311 (440) T ss_pred eeecccccCCCCccchhhhhhccceeccc--ccccccCCCCcceeEEeecCCHHHHHHHHHHHHHHHHHHhCCccccccc Confidence 66543 233455555443322211111 1111122344445555544444556677778888999999998755432 Q ss_pred -cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhh--cccchhHHHHHHHHHHHh Q lcl|Aclame:pro 281 -NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEF--DTRSVTGRNVDEIVKLVN 345 (406) Q Consensus 281 -~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 345 (406) .++-|. .....+..+...+.-+++.|...+...-....+...+.+.| ....+..+.++.+.++ T Consensus 312 ~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~~~~~~~v~i~f~~~~p~~~~~~ad~~~kl-- 389 (440) T protein:vir:95 312 FNSTSSGIALLYKMIGLEQVRKDKETYFTKALRRRYELISNIHKAINGPVIEANKLTFTFHPNIPQDVWTEIKAYIEA-- 389 (440) T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccceEEeCCCCCCCHHHHHHHHHHH-- Confidence 222111 12233455555666666666655543222222222233334 2344567777777776 Q ss_pred CCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhh-cccccccc---CcccCCCccCCC Q lcl|Aclame:pro 346 NQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDK-KEEYQDKV---GIKGKGGEVNAE 402 (406) Q Consensus 346 ~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~-~~~~~~~~---~~~~~gg~~~~~ 402 (406) .|+++..-+.++++.-..+ .. ..-+.. ........ .....++.+|.+ T Consensus 390 ~g~iS~et~~~~l~~~d~~---~E-------~~ri~~E~~~~~~~~~~~~~~~~~~~~~~e 440 (440) T protein:vir:95 390 GGEISQETLMENASFTDYK---TE-------HSRILKQGGSSDLEIGQIVGDADVGQADTE 440 (440) T ss_pred hccCcHHHHHHhCCCCCcH---HH-------HHHHHHHHHHhhhhHHhhccCCCCCCcCCC Confidence 5788887777777542111 00 011111 00001111 111122222222 No 180 >protein:vir:103951 Length: 511 # NCBI annotation: phage portal protein # Family: family:all:125 # MgeID: mge:1662 # MgeName: phiNM # Cross-refs: genbank:acc:YP_873988;genbank:gi:118430763;genbank:GeneID:4525445 Probab=98.14 E-value=3.7e-06 Score=50.34 Aligned_cols=391 Identities=9% Similarity=0.050 Sum_probs=177.8 Q ss_pred Ccc-------------------cccccCCCCcchhhHHHhhcCCccc------cc---chhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MSF-------------------FQPLGTSKVSYDDYISSVLAGDVSQ------KY---LGVSALKNSDILTATSIIAGDI 52 (406) Q Consensus 1 M~~-------------------f~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~a~~~~~v~~~i~~ia~~i 52 (406) +.+ .+.......+.-..+..+..|.... .. .+..-+.+.-....++..+.-+ T Consensus 27 ~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl 106 (511) T protein:vir:10 27 VVYTYDGTESDLLQNVNEVSKCIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYF 106 (511) T ss_pred CCccCchhhhhcccCHHHHHHHHHHHHHhhHHHHHHHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHhhhh Confidence 111 1000000011111122222221110 00 0001111223344555566555 Q ss_pred ccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEc Q lcl|Aclame:pro 53 ARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEET 132 (406) Q Consensus 53 a~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~ 132 (406) -.-|+.+...+.+ ....+..++. .-........+..+.+.+|.+|.++..+. +|.+ .+..++|..+.+.++ T Consensus 107 ~g~p~~~~~~d~~--~~~~l~~~~~-----~n~~~~~~~~~~~~~~i~G~ay~~vy~de-dg~~-~i~~~~p~~~~~vyd 177 (511) T protein:vir:10 107 LGNPIQYQDDDKD--VLEAIEAFND-----LNDVESHNRSLGLDLSIYGKAYEIMIRNQ-DDET-RLYKSDAMSTFVIYD 177 (511) T ss_pred cccCceeecCchH--HHHHHHHHHh-----hcCHHHHHHHHHHHHHhcCeeEEEEEeCC-CCce-EEEEEccceeEEEEc Confidence 5566665322211 1122222222 22344566778889999999999988874 4554 467788988888877 Q ss_pred cCc--ceEEEEE----eecCC------eE-EEEcceeeEeeccC-----------------C---------CCCccccCH Q lcl|Aclame:pro 133 DNH--EIVYTFT----DMLTA------KQ-VKCFAHDVIHWKFF-----------------S---------HDTILGRSP 173 (406) Q Consensus 133 ~~g--~~~~~~~----~~~~g------~~-~~~~~~~vih~r~~-----------------~---------~~~~~G~s~ 173 (406) +.. .+.+.+. ....+ .. ..+.++.+.++... + .+...|.|. T Consensus 178 d~~~~~~~~~vr~~~~~~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~f~nn~~g~gd 257 (511) T protein:vir:10 178 NTIERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGD 257 (511) T ss_pred CCCCCceEEEEEEEEeeecccCccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcceeEEEecCCCCCCCc Confidence 543 2222111 11010 01 12344445443210 0 012357888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc-cc-cCceeeccCCceeeeccCCh Q lcl|Aclame:pro 174 LLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG-SV-GGSPLVFDSTMEYTPLEIDT 251 (406) Q Consensus 174 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g-~~-~~~~~vl~~g~~~~~l~~~~ 251 (406) ++.+...|+..+.+.....+.+...+.|-.++......++++....++.-.-.... .. .+...-..++.+++-++... T Consensus 258 ~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 337 (511) T protein:vir:10 258 YEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQY 337 (511) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhCceeeeeccccCCchhhccchhccceecccccccccccccCCCCcceeEEeecC Confidence 88888888877766665566666666676666654444544443332221111110 00 11111234566676666655 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCHHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccC-- Q lcl|Aclame:pro 252 NVLQLITSNNFSTAQIAKALRVPSYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLN-- 316 (406) Q Consensus 252 ~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~-- 316 (406) ....+....+...+.|+..-++|..-.+. .++-|. .....+.++..+|.-.++.|...+...-.. T Consensus 338 ~~~~~e~~~~~L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~~~~~~~ 417 (511) T protein:vir:10 338 DVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDA 417 (511) T ss_pred CHHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc Confidence 55666777788888899888988754432 222111 123344555566666666665555433211 Q ss_pred ccchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCccc Q lcl|Aclame:pro 317 DKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKG 394 (406) Q Consensus 317 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~ 394 (406) ..+...+.+.| .+..+..+.++.+.+++ |+++..-+++++++-.-+....+++---.. +.....+....... T Consensus 418 ~~d~~~i~i~f~~~~p~d~~~~~~~~~kl~--G~iS~et~~~~l~~v~d~~~E~~ri~~E~~----~~~~~~~~~~~~~~ 491 (511) T protein:vir:10 418 NKDFNTVRYVYNRNLPKSLIEELKAYIDSG--GKISQTTLMSLFSFFQDPELEVKKIEEDEK----ESIKKAQKGIYKDP 491 (511) T ss_pred ccccceeeEEeCCCCCcCHHHHHHHHHHHh--ccCcHHHHHHhCCCCCCHHHHHHHHHHHHH----HHHHHHhhhcccCC Confidence 11222233334 23456777788887774 789988888887542211111111100000 00000000011111 Q ss_pred CC---CccCCCCCCC Q lcl|Aclame:pro 395 KG---GEVNAEEDKS 406 (406) Q Consensus 395 ~g---g~~~~~~~~~ 406 (406) .+ ++.+++++.+ T Consensus 492 ~~~~~~~~~~~~~~~ 506 (511) T protein:vir:10 492 RDINDDEQDDDTKDT 506 (511) T ss_pred CCCCCCCCCCcccCc Confidence 11 1111111111 No 181 >protein:vir:105292 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1679 # MgeName: PH15 # Cross-refs: genbank:acc:YP_950666;genbank:gi:119967836;genbank:GeneID:4643171 Probab=98.13 E-value=4e-06 Score=50.18 Aligned_cols=373 Identities=10% Similarity=0.031 Sum_probs=161.9 Q ss_pred Cc---------ccccccCCCCcchhhHHHhhcCCcc------------c--ccchhhhhccHHHHHHHHHHHHhhcccee Q lcl|Aclame:pro 1 MS---------FFQPLGTSKVSYDDYISSVLAGDVS------------Q--KYLGVSALKNSDILTATSIIAGDIARFPL 57 (406) Q Consensus 1 M~---------~f~~~~~~~~~~~~~~~~~~~~~~~------------~--~~~~~~a~~~~~v~~~i~~ia~~ia~~~~ 57 (406) .+ +.+....+ .+.-..+..+..|... . ...+..-+.++-...+|+..+.-+-.-|+ T Consensus 23 ~~~~~~~~i~~~i~~~~~~-~~~~~~~~~yY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~ 101 (478) T protein:vir:10 23 KYETQEEMILRLVREHKEN-IDNITMGERYYNHHPDILDAPPKRDVNGDYDETKPDWRMYTNYHQNLVDQKVAYAVANPV 101 (478) T ss_pred ccCCcHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCchhccccccccccccccccccceeccchHHHHHHHHHhhhccCCe Confidence 00 00000000 0000001111111100 0 00000011223334556666666656666 Q ss_pred EEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccC--c Q lcl|Aclame:pro 58 VKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN--H 135 (406) Q Consensus 58 ~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~--g 135 (406) .+.. +.+. ....+..+++ | ...+....++...+.+|.+|.++..+. +|++ .+..++|..+.+.+++. + T Consensus 102 ~~~~-~~d~-~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~~~~d~-~g~~-~~~~~~p~~~~~i~d~~~~~ 171 (478) T protein:vir:10 102 TFGV-DNDK-ALKQIQHTLN---H---KWDDKLVDILTAASNKGIEWVQPYVDE-EGEF-KTFRVPAEQAVPIWTNKERD 171 (478) T ss_pred eeec-CChH-HHHHHHHHHh---c---CHHHHHHHHHHHHHhcCeEEEEEEecC-CCee-EEEEEcccceEEEEcCCCCC Confidence 5432 2221 1122333332 2 355677778889999999999888874 4665 47778888888877643 2 Q ss_pred ceEEEE--EeecCCeEE-EEcceeeEeecc--------------------------CC---------CCCccccCHHHHH Q lcl|Aclame:pro 136 EIVYTF--TDMLTAKQV-KCFAHDVIHWKF--------------------------FS---------HDTILGRSPLLSL 177 (406) Q Consensus 136 ~~~~~~--~~~~~g~~~-~~~~~~vih~r~--------------------------~~---------~~~~~G~s~~~~~ 177 (406) .+...+ +...+.... .+.++.+.+++. ++ .+...|.|-+..+ T Consensus 172 ~~~~~v~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~n~~~g~sd~~~v 251 (478) T protein:vir:10 172 ELQAFIRVYELDGAERVEYWTKDDVTYYELKEGQLIPDFYRSDDHIQPHYYQGNKLMSWGRVPFIPFKNNPQEVSDLFMY 251 (478) T ss_pred ceEEEEEEEEecCceEEEEEeCCeEEEEEEcCCeeeccccccccccccceecccccccCCccceEEeccCCCCCCcHHHH Confidence 222111 111111111 122333332211 00 0234588888877 Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeec--cCCceeeeccCChhHHH Q lcl|Aclame:pro 178 GDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVF--DSTMEYTPLEIDTNVLQ 255 (406) Q Consensus 178 ~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl--~~g~~~~~l~~~~~d~~ 255 (406) ...++..+.+.....+.++..+.|-.++..... . +....+..+. ..+++.+ ..|.++..+........ T Consensus 252 ~~liDa~~~~~S~~~~~~~~~~~p~~~~~g~~~-~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~ 321 (478) T protein:vir:10 252 KTIIDALDKRLSDTQNTFDESVELIYILKGYEG-E--DMKDFMHNLK-------YYKAISVAGESGSGVDTIKVEVPIDS 321 (478) T ss_pred HHHHHHHHHHHHHHHHHHHHhhCceeeeecCCc-c--ccchhhhhhh-------hcceEEecCCCCCcceEEeecCChHH Confidence 777777776665555555655666555443221 1 1111111111 1122222 23344444444434555 Q ss_pred HHHHHHHHHHHHHHHhcCCHHHhcc-cccchhH------------HHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhh Q lcl|Aclame:pro 256 LITSNNFSTAQIAKALRVPSYKLGV-NSPNQSV------------AQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRL 322 (406) Q Consensus 256 ~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n~------------~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~ 322 (406) +....+...+.|...-++|..-.+. .++-|.. ....+..+..+|.-+++.|...+.. ..+... T Consensus 322 ~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~g~----~~~~~~ 397 (478) T protein:vir:10 322 VKEYTKMLRDYIIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYRL----DVKVQD 397 (478) T ss_pred HHHHHHHHHHHHHHHhCccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----Cccccc Confidence 6677777788888888888644322 2221111 1223344444555555444443321 112222 Q ss_pred hhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccC Q lcl|Aclame:pro 323 YHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVN 400 (406) Q Consensus 323 ~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~ 400 (406) +.+.|. +..+..+.++.+.++ .|+++...+++++++-.-+....+++-.- + +.......... ....++.+ T Consensus 398 i~i~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v~D~~~E~~ri~~E-~----~~~~~~~~~~~-~~~~~~~~ 469 (478) T protein:vir:10 398 IEITFNFNVMVNELENSQIAMNS--TGLLSKETILSNHAWVEDPVAEMERIEQE-N----IELNQQLPDIE-EGLNGEQQ 469 (478) T ss_pred ceEEecCCCCCCHHHHHHHHHHH--hCCCChHHHHHhCCCCCCHHHHHHHHHHH-H----HHHHhhccccc-cccCCCCC Confidence 344443 334566677777665 68899988888886532111111111100 0 00000001111 11112222 Q ss_pred CCCCCC Q lcl|Aclame:pro 401 AEEDKS 406 (406) Q Consensus 401 ~~~~~~ 406 (406) .+++.| T Consensus 470 ~~~~~~ 475 (478) T protein:vir:10 470 RQSENN 475 (478) T ss_pred CCCCCC Confidence 222222 No 182 >protein:vir:97171 Length: 512 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1654 # MgeName: 85 # Cross-refs: genbank:acc:YP_239722;genbank:gi:66394876;genbank:GeneID:5130904 Probab=98.09 E-value=4.9e-06 Score=49.69 Aligned_cols=391 Identities=9% Similarity=0.053 Sum_probs=177.3 Q ss_pred Cc---------------ccccccCCCCcchhhHHHhhcCCccc------ccc---hhhhhccHHHHHHHHHHHHhhccce Q lcl|Aclame:pro 1 MS---------------FFQPLGTSKVSYDDYISSVLAGDVSQ------KYL---GVSALKNSDILTATSIIAGDIARFP 56 (406) Q Consensus 1 M~---------------~f~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~a~~~~~v~~~i~~ia~~ia~~~ 56 (406) |. |.+.......+.-..+..+..|.... ... +..-+..+-..-.|+..+.-+-.-| T Consensus 31 ~~~~e~~~~~~~~~i~~~i~~~~~~~~~r~~~l~~YY~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~g~p 110 (512) T protein:vir:97 31 YDGTESDLLQNINEVSKYIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNP 110 (512) T ss_pred cCchhhhhhhhHHHHHHHHHHHHHhhHHHHHHHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccC Confidence 11 11110000111111122222221110 000 0000112223344555666565666 Q ss_pred eEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCc- Q lcl|Aclame:pro 57 LVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNH- 135 (406) Q Consensus 57 ~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g- 135 (406) +.+...+.+ ....+..++. ..........+..+.+.+|.+|.++.++. +|.+ .+..++|..+.+.+++.. T Consensus 111 ~~~~~~d~~--~~~~l~~~~~-----~n~~~~~~~~~~~~~~i~G~ay~~vy~de-d~~~-~i~~~~p~~~~~iyd~~~~ 181 (512) T protein:vir:97 111 IQCQDDDKD--VLEAIEAFND-----LNDVESHNRSLGLDLSIYGKAYELMIRNQ-DDET-RLYKSDAMSTFVIYDNTIE 181 (512) T ss_pred ceeccCChH--HHHHHHHHHh-----hcCHHHHHHHHHHHHHhcCeEEEEEEeCC-CCce-EEEEEcccceEEEEcCCCC Confidence 655322211 1122333322 22445666778889999999999988874 4554 477889999888877543 Q ss_pred -ceEEEE----EeecCC------eE-EEEcceeeEeeccC-----------------C---------CCCccccCHHHHH Q lcl|Aclame:pro 136 -EIVYTF----TDMLTA------KQ-VKCFAHDVIHWKFF-----------------S---------HDTILGRSPLLSL 177 (406) Q Consensus 136 -~~~~~~----~~~~~g------~~-~~~~~~~vih~r~~-----------------~---------~~~~~G~s~~~~~ 177 (406) .+.+.+ .....+ .. ..+.++.+.+++.. + .+...|.|.++.+ T Consensus 182 ~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~gd~e~v 261 (512) T protein:vir:97 182 RNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKV 261 (512) T ss_pred CceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcccceEeecCCCCCCCchhhh Confidence 222211 111111 11 13445555554311 0 0123578888888 Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhccc---ccCceeeccCCceeeeccCChhHH Q lcl|Aclame:pro 178 GDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGS---VGGSPLVFDSTMEYTPLEIDTNVL 254 (406) Q Consensus 178 ~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~---~~~~~~vl~~g~~~~~l~~~~~d~ 254 (406) ...++..+.+..-..+.+...+.|-.++......++++....+....-..... ......-.++|.+++-++...... T Consensus 262 ~~liDa~d~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 341 (512) T protein:vir:97 262 ITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYENRDTGIETEGSVDGGYIYKQYDVQ 341 (512) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceeeeecCccCCchhhhhhhhcccccccccchhhcccccCCCCCcceEEEeecCCHH Confidence 88888777766666656666666766665544444444443332221111111 111111235566676666555555 Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccC--ccc Q lcl|Aclame:pro 255 QLITSNNFSTAQIAKALRVPSYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLN--DKD 319 (406) Q Consensus 255 ~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~--~~~ 319 (406) .+....+...+.|+..-++|..-.+. .++-|. .....+..+..+|.-.++.|...+...--. ..+ T Consensus 342 ~~e~~~~~L~~~I~~~s~~p~~~~~~~~gn~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~~li~~~~~~~~~~~~~~d 421 (512) T protein:vir:97 342 GTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKD 421 (512) T ss_pred HHHHHHHHHHHHHHHHhCCcccCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc Confidence 56667777888888888888765542 222111 122334445555555555555554422111 112 Q ss_pred hhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCC Q lcl|Aclame:pro 320 RRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGG 397 (406) Q Consensus 320 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg 397 (406) ...+.+.|. +..+..+.++.+.++ .|+++..-++++++.-+-+....+++---.. +.....+.......+++ T Consensus 422 ~~~i~~~f~~~~p~~~~e~~~~~~kl--~giiS~et~~~~l~~v~d~~~E~eri~~E~~----~~~~~~~~~~~~~~~~~ 495 (512) T protein:vir:97 422 FNTVRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEK----ESIKKAQKGIYKDPRDI 495 (512) T ss_pred cccceEEeCCCCCcCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHH----HHHHHHhhcccCCCCCC Confidence 222334442 344566667777766 4889998888887543211111111000000 00000000111111111 Q ss_pred ccCCCCCCC Q lcl|Aclame:pro 398 EVNAEEDKS 406 (406) Q Consensus 398 ~~~~~~~~~ 406 (406) +++++++++ T Consensus 496 ~~~~~~~~~ 504 (512) T protein:vir:97 496 NDDEQDDDT 504 (512) T ss_pred CCCCCCCCc Confidence 111122222 No 183 >protein:vir:96240 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1607 # MgeName: 69 # Cross-refs: genbank:acc:YP_239567;genbank:gi:66395299;genbank:GeneID:5132789 Probab=98.07 E-value=5.4e-06 Score=49.48 Aligned_cols=391 Identities=9% Similarity=0.055 Sum_probs=179.7 Q ss_pred CcccccccCCCCcchhhHHHhhcCCccc------c---cchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccch Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQ------K---YLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDED 71 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 71 (406) ..|.++......+.-..+..+..|.... . ..+..-+...-....++..+.-+-.-|+.+...+.+ .... T Consensus 46 ~~~i~~~~~~~~~r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~~~~--~~~~ 123 (511) T protein:vir:96 46 SKYIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDDDKD--VLEA 123 (511) T ss_pred HHHHHHHHHhhHHHHHHHHHHhcccCccccccCcCcccccCcceeecchHHHHHHHHHhhhccCCceeecCchH--HHHH Confidence 1111111111111111122222221110 0 000111112233445566666666667665322211 1122 Q ss_pred HHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCc--ceEEEEE----eec Q lcl|Aclame:pro 72 INYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNH--EIVYTFT----DML 145 (406) Q Consensus 72 ~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g--~~~~~~~----~~~ 145 (406) +..++ ...........+..+.+.+|.+|.++.++. +|.+ .+..++|..+.+.+++.. .+...+. ... T Consensus 124 l~~~~-----~~n~~~~~~~~~~~~~~i~G~a~~~vy~de-d~~~-~i~~~~p~~~~~vydd~~~~~~~~~vr~~~~~~~ 196 (511) T protein:vir:96 124 IEAFN-----DLNDVESHNRSLGLDLSIYGKAYELMIRNQ-DDET-RLYKSDAMSTFVIYDNTIERNSIAGVRYLRTKPI 196 (511) T ss_pred HHHHH-----hhcCHHHHHHHHHHHHHhcCeeEEEEEeCC-CCce-EEEEEccceeEEEEcCCCCCceEEEEEEEEeeec Confidence 22222 223455677788889999999999988874 4554 577788999888776543 2222111 111 Q ss_pred CC---e---E-EEEcceeeEeeccCC--------------------------CCCccccCHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 146 TA---K---Q-VKCFAHDVIHWKFFS--------------------------HDTILGRSPLLSLGDEIDLQTGGINTLI 192 (406) Q Consensus 146 ~g---~---~-~~~~~~~vih~r~~~--------------------------~~~~~G~s~~~~~~~~i~~~~~~~~~~~ 192 (406) .+ . . ..+.++.+.+++... .+...|.|.++.+...|+..+.+..... T Consensus 197 d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~g~gd~e~v~~liDa~d~~~S~~~ 276 (511) T protein:vir:96 197 DKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAESDTA 276 (511) T ss_pred cccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCCceeeEEecCCCCCCCchhhhHHHHHHHHHHHHHHH Confidence 10 0 1 123444444432100 0123578888888888887777666666 Q ss_pred HHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc--cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 193 KFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG--SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKA 270 (406) Q Consensus 193 ~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g--~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~ 270 (406) +.+...+.|-.++......+.++.....+.-.-.... ...+...-..++.++.-++.......+....+...+.|+.. T Consensus 277 ~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~~~~~L~~~I~~~ 356 (511) T protein:vir:96 277 NYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIHMF 356 (511) T ss_pred HHHHHhhCceeeeecCccCCchhhcccccccceecccccccccccccCCCCcceeEEeecCCHHHHHHHHHHHHHHHHHH Confidence 6666666676666554444444433322211111100 00011112345666666665555566677778888889999 Q ss_pred hcCCHHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCc--cchhhhhhhh--cccchh Q lcl|Aclame:pro 271 LRVPSYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLND--KDRRLYHIEF--DTRSVT 333 (406) Q Consensus 271 fgvpp~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~--~~~~~~~~~~--~~~~~~ 333 (406) -++|..-.+. .++-|. .....+..+..+|.-.++.|...+..+--.. .+...+.+.| .+..+. T Consensus 357 s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~~~~~d~~~i~~~f~~~~p~n~ 436 (511) T protein:vir:96 357 TNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTWSIDANKDFNTVRYVYNRNLPKSL 436 (511) T ss_pred hCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccceEEeCCCCCCCH Confidence 9998765532 222111 1233345556666666666666555432111 1222233344 234566 Q ss_pred HHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 334 GRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 334 ~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) .+.++.+.++ .|+++.-.+++++++-.-+....+++---. . +.....+.......++.+++++++++ T Consensus 437 ~e~~~~~~kl--~G~iS~et~l~~l~~v~D~~~E~~ri~~E~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (511) T protein:vir:96 437 IEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDE--K--ESIKKAQKGIYKDPRDINDDEQDDDT 503 (511) T ss_pred HHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHHH--H--HHHHHHhhccccCCCCCCCCCCCCcc Confidence 6777777766 589999888888864321111111110000 0 00000000011111111111111111 No 184 >protein:vir:97447 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1676 # MgeName: 92 # Cross-refs: genbank:acc:YP_240744;genbank:gi:66396413;genbank:GeneID:5133803 Probab=98.05 E-value=5.8e-06 Score=49.29 Aligned_cols=376 Identities=9% Similarity=-0.008 Sum_probs=166.0 Q ss_pred Cc--ccccccCCC-----------------CcchhhHHHhhcCCcc--------------cccchhhhhccHHHHHHHHH Q lcl|Aclame:pro 1 MS--FFQPLGTSK-----------------VSYDDYISSVLAGDVS--------------QKYLGVSALKNSDILTATSI 47 (406) Q Consensus 1 M~--~f~~~~~~~-----------------~~~~~~~~~~~~~~~~--------------~~~~~~~a~~~~~v~~~i~~ 47 (406) |+ .+....-.. ...-..+..+..|... ....+..-+.++-...+|+. T Consensus 13 ~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Ivd~ 92 (474) T protein:vir:97 13 YGEEVVEQLKPQFETQEEMIVRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVHGNIDYDKPDWRITTNFHQNLVDQ 92 (474) T ss_pred hhhHHHHhhhhcccCHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccchhccccccccccCcceeecchHHHHHHH Confidence 11 000000000 0000011111111100 00000011123334556677 Q ss_pred HHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeE Q lcl|Aclame:pro 48 IAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSET 127 (406) Q Consensus 48 ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~ 127 (406) .+.-+-.-|+.+...+ +. ....+..++ . .........+....+.+|.+|.++..+. +|.+ .+..++|..+ T Consensus 93 ~~~~l~g~p~~~~~~d-~~-~~~~l~~~~-----~-n~~~~~~~e~~~~~~~~G~~~~~~~~d~-~~~~-~i~~~~p~~~ 162 (474) T protein:vir:97 93 KVSYVASKPVTYSCED-EN-VLKVIHDVL-----D-TRWDNKLIDILTATSNKGIDWLQVYINE-NGEM-KLFRVPAEQA 162 (474) T ss_pred HHhhhhcCCceeccCc-HH-HHHHHHHHH-----h-ccHHHHHHHHHHHHhhcCceEEEEEecC-CCee-EEEEEcccce Confidence 7777766676653222 11 111222222 1 2344666777888999999999888874 4655 4667888888 Q ss_pred EEEEccC--cceEEEEE--eecCCe-EEEEcceeeEeecc----------------------C-----C----CCCcccc Q lcl|Aclame:pro 128 TVEETDN--HEIVYTFT--DMLTAK-QVKCFAHDVIHWKF----------------------F-----S----HDTILGR 171 (406) Q Consensus 128 ~~~~~~~--g~~~~~~~--~~~~g~-~~~~~~~~vih~r~----------------------~-----~----~~~~~G~ 171 (406) .+.+++. +.+.+.+. ...... ...+....+.+++. + | .+...|. T Consensus 163 ~~v~d~~~~~~~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~ 242 (474) T protein:vir:97 163 IPIWVDKEREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGNWGRVPFIAFKNNPEEV 242 (474) T ss_pred EEEEcCCCCCceEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccCCCccceEEecCCcCCC Confidence 8887653 33322111 111111 11223333333221 0 0 0123688 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCCh Q lcl|Aclame:pro 172 SPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDT 251 (406) Q Consensus 172 s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~ 251 (406) |-++.+...++..+.+.....+.+...+.|-.++...... +.+.+.... ...+++.++++.+++.++... T Consensus 243 sd~e~v~~liDa~n~~~s~~~~~~~~~~~~~lv~~g~~~~---~~~~~~~~~-------~~~~~i~~~~~~~~~~l~~~~ 312 (474) T protein:vir:97 243 SDIWMYKSIIDAIDKRLSDAQNMFDESVELIYILKGYEGE---DLEEFMRGL-------KYYKAINVDGDGGVETIQVEV 312 (474) T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCcc---cchhhhhhh-------hccceeeccCCCceeEEeecC Confidence 8888888888877766665555566556665555432211 111111111 123466677666666666554 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCHHHhc-ccccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc Q lcl|Aclame:pro 252 NVLQLITSNNFSTAQIAKALRVPSYKLG-VNSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLNDK 318 (406) Q Consensus 252 ~d~~~~e~~~~~~~~Ia~~fgvpp~~lg-~~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~ 318 (406) ....+....+...+.|...-++|..-.+ ..++-|. .....+..+..+|.-+++.|.+.++.+ . T Consensus 313 ~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~----~ 388 (474) T protein:vir:97 313 PVSSTKEYIDLMRVYIMEFGQGVDFQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELISFIIDFNNLK----T 388 (474) T ss_pred CHHHHHHHHHHHHHHHHHHhCccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----c Confidence 5555566677777888888888753322 1221111 122333455556666666665544321 1 Q ss_pred chhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCc Q lcl|Aclame:pro 319 DRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE 398 (406) Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~ 398 (406) +...+.+.|. +.......+.+..+.+.|+++..-++++++.-+-+....+++---. +..............+++ T Consensus 389 d~~~i~v~f~-~~~p~~~~e~a~~~~~~g~iS~et~l~~l~~v~D~~~E~eri~~E~-----~~~~~~~~~~~~~~~~~~ 462 (474) T protein:vir:97 389 DVKDIEISFN-FNRMMNDAEQSQIIAQSQYLSRETLVKSSPLVDDYKAELERIEQEQ-----MEYNKQLPNLDDGGADGA 462 (474) T ss_pred ccceeeEEec-cCcccCHHHHHHHHHHcCCCCHHHHHHhCCCCCCHHHHHHHHHHHH-----HHHHhhccccCCCCCCCc Confidence 2223344442 2222333444455667799999888888754211111111110000 000000000001111111 Q ss_pred cCCCCCCC Q lcl|Aclame:pro 399 VNAEEDKS 406 (406) Q Consensus 399 ~~~~~~~~ 406 (406) .+++++.+ T Consensus 463 ~~~~~~~~ 470 (474) T protein:vir:97 463 QQQEGSNN 470 (474) T ss_pred ccCCCCcc Confidence 11111111 No 185 >protein:vir:94498 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1508 # MgeName: 88 # Cross-refs: genbank:acc:YP_240672;genbank:gi:66396340;genbank:GeneID:5133762 Probab=98.05 E-value=5.8e-06 Score=49.29 Aligned_cols=376 Identities=9% Similarity=-0.008 Sum_probs=166.0 Q ss_pred Cc--ccccccCCC-----------------CcchhhHHHhhcCCcc--------------cccchhhhhccHHHHHHHHH Q lcl|Aclame:pro 1 MS--FFQPLGTSK-----------------VSYDDYISSVLAGDVS--------------QKYLGVSALKNSDILTATSI 47 (406) Q Consensus 1 M~--~f~~~~~~~-----------------~~~~~~~~~~~~~~~~--------------~~~~~~~a~~~~~v~~~i~~ 47 (406) |+ .+....-.. ...-..+..+..|... ....+..-+.++-...+|+. T Consensus 13 ~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Ivd~ 92 (474) T protein:vir:94 13 YGEEVVEQLKPQFETQEEMIVRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVHGNIDYDKPDWRITTNFHQNLVDQ 92 (474) T ss_pred hhhHHHHhhhhcccCHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccchhccccccccccCcceeecchHHHHHHH Confidence 11 000000000 0000011111111100 00000011123334556677 Q ss_pred HHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeE Q lcl|Aclame:pro 48 IAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSET 127 (406) Q Consensus 48 ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~ 127 (406) .+.-+-.-|+.+...+ +. ....+..++ . .........+....+.+|.+|.++..+. +|.+ .+..++|..+ T Consensus 93 ~~~~l~g~p~~~~~~d-~~-~~~~l~~~~-----~-n~~~~~~~e~~~~~~~~G~~~~~~~~d~-~~~~-~i~~~~p~~~ 162 (474) T protein:vir:94 93 KVSYVASKPVTYSCED-EN-VLKVIHDVL-----D-TRWDNKLIDILTATSNKGIDWLQVYINE-NGEM-KLFRVPAEQA 162 (474) T ss_pred HHhhhhcCCceeccCc-HH-HHHHHHHHH-----h-ccHHHHHHHHHHHHhhcCceEEEEEecC-CCee-EEEEEcccce Confidence 7777766676653222 11 111222222 1 2344666777888999999999888874 4655 4667888888 Q ss_pred EEEEccC--cceEEEEE--eecCCe-EEEEcceeeEeecc----------------------C-----C----CCCcccc Q lcl|Aclame:pro 128 TVEETDN--HEIVYTFT--DMLTAK-QVKCFAHDVIHWKF----------------------F-----S----HDTILGR 171 (406) Q Consensus 128 ~~~~~~~--g~~~~~~~--~~~~g~-~~~~~~~~vih~r~----------------------~-----~----~~~~~G~ 171 (406) .+.+++. +.+.+.+. ...... ...+....+.+++. + | .+...|. T Consensus 163 ~~v~d~~~~~~~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~ 242 (474) T protein:vir:94 163 IPIWVDKEREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGNWGRVPFIAFKNNPEEV 242 (474) T ss_pred EEEEcCCCCCceEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccCCCccceEEecCCcCCC Confidence 8887653 33322111 111111 11223333333221 0 0 0123688 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCCh Q lcl|Aclame:pro 172 SPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDT 251 (406) Q Consensus 172 s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~ 251 (406) |-++.+...++..+.+.....+.+...+.|-.++...... +.+.+.... ...+++.++++.+++.++... T Consensus 243 sd~e~v~~liDa~n~~~s~~~~~~~~~~~~~lv~~g~~~~---~~~~~~~~~-------~~~~~i~~~~~~~~~~l~~~~ 312 (474) T protein:vir:94 243 SDIWMYKSIIDAIDKRLSDAQNMFDESVELIYILKGYEGE---DLEEFMRGL-------KYYKAINVDGDGGVETIQVEV 312 (474) T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCcc---cchhhhhhh-------hccceeeccCCCceeEEeecC Confidence 8888888888877766665555566556665555432211 111111111 123466677666666666554 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCHHHhc-ccccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc Q lcl|Aclame:pro 252 NVLQLITSNNFSTAQIAKALRVPSYKLG-VNSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLNDK 318 (406) Q Consensus 252 ~d~~~~e~~~~~~~~Ia~~fgvpp~~lg-~~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~ 318 (406) ....+....+...+.|...-++|..-.+ ..++-|. .....+..+..+|.-+++.|.+.++.+ . T Consensus 313 ~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~----~ 388 (474) T protein:vir:94 313 PVSSTKEYIDLMRVYIMEFGQGVDFQTDKFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELISFIIDFNNLK----T 388 (474) T ss_pred CHHHHHHHHHHHHHHHHHHhCccccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----c Confidence 5555566677777888888888753322 1221111 122333455556666666665544321 1 Q ss_pred chhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCc Q lcl|Aclame:pro 319 DRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE 398 (406) Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~ 398 (406) +...+.+.|. +.......+.+..+.+.|+++..-++++++.-+-+....+++---. +..............+++ T Consensus 389 d~~~i~v~f~-~~~p~~~~e~a~~~~~~g~iS~et~l~~l~~v~D~~~E~eri~~E~-----~~~~~~~~~~~~~~~~~~ 462 (474) T protein:vir:94 389 DVKDIEISFN-FNRMMNDAEQSQIIAQSQYLSRETLVKSSPLVDDYKAELERIEQEQ-----MEYNKQLPNLDDGGADGA 462 (474) T ss_pred ccceeeEEec-cCcccCHHHHHHHHHHcCCCCHHHHHHhCCCCCCHHHHHHHHHHHH-----HHHHhhccccCCCCCCCc Confidence 2223344442 2222333444455667799999888888754211111111110000 000000000001111111 Q ss_pred cCCCCCCC Q lcl|Aclame:pro 399 VNAEEDKS 406 (406) Q Consensus 399 ~~~~~~~~ 406 (406) .+++++.+ T Consensus 463 ~~~~~~~~ 470 (474) T protein:vir:94 463 QQQEGSNN 470 (474) T ss_pred ccCCCCcc Confidence 11111111 No 186 >protein:vir:2500 Length: 501 # NCBI annotation: putative portal gp5 # Family: family:all:524 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569741;genbank:gi:18496891;genbank:GeneID:932330 Probab=98.05 E-value=5.9e-06 Score=49.25 Aligned_cols=375 Identities=9% Similarity=-0.032 Sum_probs=146.1 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcc-----cccchhhhhccH-------HHHHHHHHHHHhhccceeEEEecCCcccc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVS-----QKYLGVSALKNS-------DILTATSIIAGDIARFPLVKKDVNGDIIH 68 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~a~~~~-------~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 68 (406) =.|++.... ..+.-..+..+..|... ....+. ++.. -..-+|+.++..+---.|.+ .+++ . T Consensus 33 ~~l~~~~~~-~~~rl~~l~~YY~G~~~~~~~~~~~~~~--~~~~~~~~v~n~~~~ivd~~a~~l~~~gf~~--~d~~--~ 105 (501) T protein:vir:25 33 ADMWRLHIS-ERQWLDRIYEYTKGLRGRPEVPEGASDE--VKELAKLSVKNVLSLVRDSFAQNLSVVGYRN--ALAK--E 105 (501) T ss_pred HHHHHHHHH-HHHHHHHHHHHHhcCCCchhccccCChh--hhhhHhhhhcChHHHHHHHHHhhhcccceec--CCcc--c Confidence 011111100 00111112222222211 111111 1111 11223333333221112211 1221 1 Q ss_pred cchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCc---ceEEEE---- Q lcl|Aclame:pro 69 DEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNH---EIVYTF---- 141 (406) Q Consensus 69 ~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g---~~~~~~---- 141 (406) ...+..++. -|. .......+..+.+++|.+|.++.++.. |. .+..++|..+.+.+++.. .+.+.+ T Consensus 106 ~~~l~~i~~--~N~---~d~~~~~~~~~a~i~G~ay~~v~~de~-~~--~i~~~sp~~~~~iy~D~~~~~~~~~ai~~~~ 177 (501) T protein:vir:25 106 NDPAWEMWQ--RNR---MDARQAEVHRPALTYGASYVTVTPTDE-GP--VFRTRSPRQILAVYADPSVDAWPQYALETWV 177 (501) T ss_pred hHHHHHHHH--hcC---hhHHHHHHHHHHhhcCceEEEEecCCC-CC--eEEEeccccEEEEEecCCCCcceeEEEEEEe Confidence 223333332 232 345556788899999999998888744 42 466778888876654321 121111 Q ss_pred EeecCCe---EEEEcce----------------------------------------------eeEeeccCCCCCccccC Q lcl|Aclame:pro 142 TDMLTAK---QVKCFAH----------------------------------------------DVIHWKFFSHDTILGRS 172 (406) Q Consensus 142 ~~~~~g~---~~~~~~~----------------------------------------------~vih~r~~~~~~~~G~s 172 (406) .....+. ...+.+. .|+||++.......|.| T Consensus 178 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPiv~f~N~~~~~~~g~s 257 (501) T protein:vir:25 178 AQKDAKPHRRGVLYDDTYMYELDLGEVVLGDAGGGQATQQPVNVREVTDVIEHGATFEGKPVCPVVRFVNGRDADDMIVG 257 (501) T ss_pred eccccCcceeEEEecCeeEEEEecCceeeeeccccccccccccccccccccccccccCCccceeeEeccCccccCccccc Confidence 1111000 0011111 23444433222235777 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeecc-CCceeeeccCCh Q lcl|Aclame:pro 173 PLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFD-STMEYTPLEIDT 251 (406) Q Consensus 173 ~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~-~g~~~~~l~~~~ 251 (406) .++.+...++..+...........-.+.|..++..- +.++.+.++ .. .+++++++ ++.++.++.... T Consensus 258 die~v~~l~Da~~~~~s~~~~~~e~~a~p~~~i~G~---~~~~~~~~~-----~~----~~~i~~~~~~~~~~~q~~~~~ 325 (501) T protein:vir:25 258 EVAPLILLQQAINSVNFDRLIVSRFGANPQRVISGW---TGSKAEVLK-----AS----ALRVWTFEDPEVKAQAFPPAS 325 (501) T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhccHHHHHhCC---CCCccchhh-----hc----ccceeccCCCCceEEEecccC Confidence 666555555555444443333333333444333321 122222111 11 23456655 467776665422 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhccCcc Q lcl|Aclame:pro 252 NVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQ-------------LMEDYVTNDLPFYFDAITSELGLKTLNDK 318 (406) Q Consensus 252 ~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~-------------~~~~~~~~~i~P~~~~ie~~l~~~l~~~~ 318 (406) - ..+.+..+.....|+..=++|+..+|....+.+.+. ..+..+...+.-+++.+....... ... T Consensus 326 ~-~~~~~~l~~~i~~i~~~s~~P~~~~~~~~~N~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~rl~~~~~~~~--~~~ 402 (501) T protein:vir:25 326 V-EPYNLILEEMLQHVAMVAQISPAQVTGKMINVSAEALAAAEANQQRKLAAKRESFGESWEQLLRLAAEMDDDP--DTA 402 (501) T ss_pred h-HHHHHHHHHHHHHHHhhcCCChhhhccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--ccc Confidence 1 237788999999999999999999986443332221 111222222222222221111100 000 Q ss_pred chhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHH-hCCCCCCCCCCCeeeeccCccc-hhhccccccccCccc Q lcl|Aclame:pro 319 DRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVE-LGKQKSTDPNMDRYQSSLNYVF-LDKKEEYQDKVGIKG 394 (406) Q Consensus 319 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~-~g~~p~~~~~gd~~~~~~n~~~-~~~~~~~~~~~~~~~ 394 (406) ....+.+.| ....+..+.++++.++++.|+ +.-.+..+ .|+.+-.-+............+ ++.....+.....+. T Consensus 403 ~~~~i~v~w~~~~~~s~~~~ada~~kl~~~gi-s~et~~~~~~g~~~~~ie~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 481 (501) T protein:vir:25 403 ADSGAEVLWRDTEARSFGAVVDGITKLASAGI-PIEHLLSMVPGMTQQTIQAIKDSLRGGEVKSLVDKLLSNEPAPVPPP 481 (501) T ss_pred cceeeeEEecCCCCCCHHHHHHHHHHHHhcCC-CHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHhhccCcCCCCCC Confidence 111122222 223356778888888888886 44444433 4776421000000000000000 110000000000000 Q ss_pred CCCc--cCCCCCCC Q lcl|Aclame:pro 395 KGGE--VNAEEDKS 406 (406) Q Consensus 395 ~gg~--~~~~~~~~ 406 (406) .+++ ..++++++ T Consensus 482 ~~~~~~~~~~~~~~ 495 (501) T protein:vir:25 482 PPQAAAQALNEGGV 495 (501) T ss_pred CCCCCccccccccC Confidence 0000 01111111 No 187 >protein:vir:1236 Length: 483 # NCBI annotation: similar to phage Spp1 gp6 (portal protein) # Family: family:all:125 # MgeID: mge:25 # MgeName: phi ETA # Cross-refs: genbank:acc:NP_510935;genbank:gi:17426269;genbank:GeneID:927380 Probab=98.04 E-value=6.1e-06 Score=49.18 Aligned_cols=371 Identities=11% Similarity=0.026 Sum_probs=167.9 Q ss_pred Ccccc---ccc---CCCCcchhhHHHhhcCCcc-----------c---ccchhhhhccHHHHHHHHHHHHhhccceeEEE Q lcl|Aclame:pro 1 MSFFQ---PLG---TSKVSYDDYISSVLAGDVS-----------Q---KYLGVSALKNSDILTATSIIAGDIARFPLVKK 60 (406) Q Consensus 1 M~~f~---~~~---~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 60 (406) +...+ ++- ......-..+..+..|... . ...+..-+.++-...+|+..+.-+-.-|+.+. T Consensus 34 e~~~~~i~~~i~~~~~~~~r~~~l~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~~l~G~p~~~~ 113 (483) T protein:vir:12 34 ETLEEMIVRYIKQHLEKLPEISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKPIAFK 113 (483) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccccccccccchHHHHHHHHhhhhcccCceec Confidence 11100 000 0000111111122222100 0 00000112233345566666666655666553 Q ss_pred ecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccC--cceE Q lcl|Aclame:pro 61 DVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN--HEIV 138 (406) Q Consensus 61 ~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~--g~~~ 138 (406) ..+.+ ....+..++. | ...+....+..+.+.+|.+|.++..+. +|++ .+..++|..+.+.+++. +.+. T Consensus 114 ~~d~~--~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~y~~v~~d~-d~~~-~i~~~~p~~~~~v~d~~~~~~~~ 183 (483) T protein:vir:12 114 HTDDE--VVKRIDEVLG---N---RFDDKLHSVLTGASNKGIEWLHPYLDE-EGEF-KLFRVPAEQGIPIWTDKEHEELE 183 (483) T ss_pred cCChH--HHHHHHHHHh---c---cHHHHHHHHHHHHhhCCeEEEEEEEcC-CCce-EEEEEcccceEEEEcCCCCCceE Confidence 22211 1122222221 2 234556677888999999999988874 4665 47788999988877643 3332 Q ss_pred EEE--EeecCC-eEEEEcceeeEeecc----------------------CCC---------CCccccCHHHHHHHHHHHH Q lcl|Aclame:pro 139 YTF--TDMLTA-KQVKCFAHDVIHWKF----------------------FSH---------DTILGRSPLLSLGDEIDLQ 184 (406) Q Consensus 139 ~~~--~~~~~g-~~~~~~~~~vih~r~----------------------~~~---------~~~~G~s~~~~~~~~i~~~ 184 (406) +.+ +..... ....+.+..+.|+.. ++. +...|.|-++.+...++.. T Consensus 184 ~~ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~ 263 (483) T protein:vir:12 184 AFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYKTLIDAY 263 (483) T ss_pred EEEEEEEeecceEEEEEecCeEEEEEEeCCeeeecccccccccccccccCCCCccceEEecCCCCCCCchhhHHHHHHHH Confidence 221 111111 111223333333210 000 1235778888877777777 Q ss_pred HHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHH Q lcl|Aclame:pro 185 TGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFST 264 (406) Q Consensus 185 ~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~ 264 (406) +.+.....+.+...+.|-.++.... .++.+.++..+. ..+++.++.+.+++.+.....+..+....+... T Consensus 264 d~~~S~~~~~~~~~~~~~lv~~g~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 333 (483) T protein:vir:12 264 NRRLSDLSNTFKDSNELTYVLTNYD---DQELPEFKRLLR-------YYGAIKVSDNGGVDTIQVEVPVENSKKYLDELY 333 (483) T ss_pred HHHHHHHHHHHHHhcCceeeeecCC---cccchhHHHhhh-------hccccccCCCCcceEEeecCCHHHHHHHHHHHH Confidence 6666555555665566655554322 222222222221 122444555555555555545556667777778 Q ss_pred HHHHHHhcCCHHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhh--cc Q lcl|Aclame:pro 265 AQIAKALRVPSYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEF--DT 329 (406) Q Consensus 265 ~~Ia~~fgvpp~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~--~~ 329 (406) +.|+..-++|..-.+. .++-|. .....+..+...+.-+++.|...+..+ .+...+.+.| .+ T Consensus 334 ~~I~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~li~~~~~~~----~~~~~i~v~f~~~~ 409 (483) T protein:vir:12 334 QKIMLFGQAVDFSSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIK----GEHKDVDISFNYNK 409 (483) T ss_pred HHHHHHhCCCCCCccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CccceeeEEeCCCC Confidence 8888888888644432 121111 122334455556666666665544321 1222333434 34 Q ss_pred cchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCc--------cCC Q lcl|Aclame:pro 330 RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE--------VNA 401 (406) Q Consensus 330 ~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~--------~~~ 401 (406) ..+..+.++.+.++ .|+++..-++++++.-+-+....+++-. + ..+...+......++. .++ T Consensus 410 p~~~~~~a~~~~kl--~GiiS~et~~~~~~~v~d~~~E~~ri~~-------E-~~~~~~~~~~~~~~~~d~~~~~~~~~~ 479 (483) T protein:vir:12 410 VANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQ-------E-QMEYNKQLPNLDDGGADGAQQQERSNN 479 (483) T ss_pred CCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHH-------H-HHHHHhhcccccccccCCcccCCCCCc Confidence 45667777777766 4899998888887653211111111100 0 0000000000000111 111 Q ss_pred CCCC Q lcl|Aclame:pro 402 EEDK 405 (406) Q Consensus 402 ~~~~ 405 (406) ++.+ T Consensus 480 ~e~e 483 (483) T protein:vir:12 480 KESE 483 (483) T ss_pred ccCC Confidence 1111 No 188 >protein:vir:96366 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1613 # MgeName: 53 # Cross-refs: genbank:acc:YP_239644;genbank:gi:66395376;genbank:GeneID:5132842 Probab=98.04 E-value=6.1e-06 Score=49.16 Aligned_cols=391 Identities=9% Similarity=0.049 Sum_probs=172.9 Q ss_pred Cccc--c-----------------cccCCCCcchhhHHHhhcCCccc------c---cchhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MSFF--Q-----------------PLGTSKVSYDDYISSVLAGDVSQ------K---YLGVSALKNSDILTATSIIAGDI 52 (406) Q Consensus 1 M~~f--~-----------------~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~a~~~~~v~~~i~~ia~~i 52 (406) +.+. . +......+.-..+..+..|.... . ..+..-+.+.-..-.|+..+.-+ T Consensus 27 ~~~~~~~~e~~~~~~~~~i~~~i~~~~~~~~~r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl 106 (511) T protein:vir:96 27 VVYTYDGTESDLLQNVNEVSKYIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYF 106 (511) T ss_pred CcccccchhhhhhcCHHHHHHHHHHHHHhhhHHHHHHHHHhhccCccccccCcccccccCcceeecchHHHHHHHHhhhh Confidence 1110 0 00000001011122222221110 0 00000111222334455555555 Q ss_pred ccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEc Q lcl|Aclame:pro 53 ARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEET 132 (406) Q Consensus 53 a~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~ 132 (406) -.-|+.+...+.+ ....+..++. .-....+...+....+.+|.+|.++.++. +|++ .+..++|..+.+.++ T Consensus 107 ~g~p~~~~~~d~~--~~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~a~~~vy~d~-dg~~-~i~~~~p~~~~~v~d 177 (511) T protein:vir:96 107 LGNPIQYQDDDKD--VLEAIEAFND-----LNDVESHNRSLGLDLSIYGKAYELMIRNQ-DDET-RLYKSDAMSTFIIYD 177 (511) T ss_pred cccCceeecCchH--HHHHHHHHHh-----hcChhHHHHHHHHHHHhcCeeEEEEEeCC-CCce-EEEEEcccceEEEEc Confidence 5556654322211 1122233322 22344666778889999999999888874 4654 467788999888877 Q ss_pred cCc--ceEEEE--E--eecCC---e---E-EEEcceeeEeeccCC--------------------------CCCccccCH Q lcl|Aclame:pro 133 DNH--EIVYTF--T--DMLTA---K---Q-VKCFAHDVIHWKFFS--------------------------HDTILGRSP 173 (406) Q Consensus 133 ~~g--~~~~~~--~--~~~~g---~---~-~~~~~~~vih~r~~~--------------------------~~~~~G~s~ 173 (406) +.. .+.+.+ + ....+ . . ..+.++.+.+++... .+...|.|. T Consensus 178 d~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~gd 257 (511) T protein:vir:96 178 NTVERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKGD 257 (511) T ss_pred CCCCCceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCCc Confidence 643 222211 1 11111 0 1 133455555543210 012347888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhc-ccc-cCceeeccCCceeeeccCCh Q lcl|Aclame:pro 174 LLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMRE-GSV-GGSPLVFDSTMEYTPLEIDT 251 (406) Q Consensus 174 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-g~~-~~~~~vl~~g~~~~~l~~~~ 251 (406) ++.+...++..+.+..-..+.+...+.|-.++......++++.+...+.-.-... +.. ...-.-...+.+++-++... T Consensus 258 ~e~v~~liDa~~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 337 (511) T protein:vir:96 258 YEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYVDAEGRETEGSVDGGYIYKQY 337 (511) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhcchhheecCccCCchhhcccccccceeccccceeccccccCCCCcceeEEeecC Confidence 8888888887666655555555555566666655444444443332221111110 000 00000123345555555444 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCHHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccC-- Q lcl|Aclame:pro 252 NVLQLITSNNFSTAQIAKALRVPSYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLN-- 316 (406) Q Consensus 252 ~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~-- 316 (406) ....+....+...+.|+..-++|..-.+. .++-|. .....+..+...|.-.++.|...+...-.. T Consensus 338 ~~~~~e~~~~~L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~ 417 (511) T protein:vir:96 338 DVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDA 417 (511) T ss_pred CHHHHHHHHHHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc Confidence 45556677777888899999998765542 222111 123334555556666666665555432211 Q ss_pred ccchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCccc Q lcl|Aclame:pro 317 DKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKG 394 (406) Q Consensus 317 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~ 394 (406) ..+...+.+.| .+..+..+.++.+.+++ |+++..-+.+++++-+-+....+++- .-.. +.....+....... T Consensus 418 ~~~~~~i~~~f~~~~p~n~~e~~d~~~kl~--G~iS~et~l~~l~~v~d~~~El~ri~--~E~~--~~~~~~~~~~~~~~ 491 (511) T protein:vir:96 418 NKDFNTVRYVYNRNLPKSLIEELKAYIDSG--GKISQTTLMSLFSFFQDPELEVKKIE--EDEK--ESIKKAQKGIYKDP 491 (511) T ss_pred ccccccceEEeCCCCCcCHHHHHHHHHHHh--ccCChHHHHHhCCCCCCHHHHHHHHH--HHHH--HHHHHHhhccccCC Confidence 11222233444 23445667777777774 78998878877643221111111100 0000 00000001111111 Q ss_pred CCCccCCCCCCC Q lcl|Aclame:pro 395 KGGEVNAEEDKS 406 (406) Q Consensus 395 ~gg~~~~~~~~~ 406 (406) .+.+++++++++ T Consensus 492 ~~~~~~~~~~~~ 503 (511) T protein:vir:96 492 RDINDDEQDDDT 503 (511) T ss_pred CCCCCCCCCCCc Confidence 121222222222 No 189 >protein:vir:78805 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1858 # MgeName: 80alpha # Cross-refs: genbank:acc:YP_001285356;genbank:gi:148717884;genbank:GeneID:5246936 Probab=98.04 E-value=6.1e-06 Score=49.16 Aligned_cols=391 Identities=9% Similarity=0.049 Sum_probs=172.9 Q ss_pred Cccc--c-----------------cccCCCCcchhhHHHhhcCCccc------c---cchhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MSFF--Q-----------------PLGTSKVSYDDYISSVLAGDVSQ------K---YLGVSALKNSDILTATSIIAGDI 52 (406) Q Consensus 1 M~~f--~-----------------~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~a~~~~~v~~~i~~ia~~i 52 (406) +.+. . +......+.-..+..+..|.... . ..+..-+.+.-..-.|+..+.-+ T Consensus 27 ~~~~~~~~e~~~~~~~~~i~~~i~~~~~~~~~r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl 106 (511) T protein:vir:78 27 VVYTYDGTESDLLQNVNEVSKYIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYF 106 (511) T ss_pred CcccccchhhhhhcCHHHHHHHHHHHHHhhhHHHHHHHHHhhccCccccccCcccccccCcceeecchHHHHHHHHhhhh Confidence 1110 0 00000001011122222221110 0 00000111222334455555555 Q ss_pred ccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEc Q lcl|Aclame:pro 53 ARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEET 132 (406) Q Consensus 53 a~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~ 132 (406) -.-|+.+...+.+ ....+..++. .-....+...+....+.+|.+|.++.++. +|++ .+..++|..+.+.++ T Consensus 107 ~g~p~~~~~~d~~--~~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~a~~~vy~d~-dg~~-~i~~~~p~~~~~v~d 177 (511) T protein:vir:78 107 LGNPIQYQDDDKD--VLEAIEAFND-----LNDVESHNRSLGLDLSIYGKAYELMIRNQ-DDET-RLYKSDAMSTFIIYD 177 (511) T ss_pred cccCceeecCchH--HHHHHHHHHh-----hcChhHHHHHHHHHHHhcCeeEEEEEeCC-CCce-EEEEEcccceEEEEc Confidence 5556654322211 1122233322 22344666778889999999999888874 4654 467788999888877 Q ss_pred cCc--ceEEEE--E--eecCC---e---E-EEEcceeeEeeccCC--------------------------CCCccccCH Q lcl|Aclame:pro 133 DNH--EIVYTF--T--DMLTA---K---Q-VKCFAHDVIHWKFFS--------------------------HDTILGRSP 173 (406) Q Consensus 133 ~~g--~~~~~~--~--~~~~g---~---~-~~~~~~~vih~r~~~--------------------------~~~~~G~s~ 173 (406) +.. .+.+.+ + ....+ . . ..+.++.+.+++... .+...|.|. T Consensus 178 d~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~gd 257 (511) T protein:vir:78 178 NTVERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKGD 257 (511) T ss_pred CCCCCceEEEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCCc Confidence 643 222211 1 11111 0 1 133455555543210 012347888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhc-ccc-cCceeeccCCceeeeccCCh Q lcl|Aclame:pro 174 LLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMRE-GSV-GGSPLVFDSTMEYTPLEIDT 251 (406) Q Consensus 174 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-g~~-~~~~~vl~~g~~~~~l~~~~ 251 (406) ++.+...++..+.+..-..+.+...+.|-.++......++++.+...+.-.-... +.. ...-.-...+.+++-++... T Consensus 258 ~e~v~~liDa~~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 337 (511) T protein:vir:78 258 YEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYVDAEGRETEGSVDGGYIYKQY 337 (511) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhcchhheecCccCCchhhcccccccceeccccceeccccccCCCCcceeEEeecC Confidence 8888888887666655555555555566666655444444443332221111110 000 00000123345555555444 Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCHHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccC-- Q lcl|Aclame:pro 252 NVLQLITSNNFSTAQIAKALRVPSYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLN-- 316 (406) Q Consensus 252 ~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~-- 316 (406) ....+....+...+.|+..-++|..-.+. .++-|. .....+..+...|.-.++.|...+...-.. T Consensus 338 ~~~~~e~~~~~L~~~I~~~s~~P~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~ 417 (511) T protein:vir:78 338 DVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDA 417 (511) T ss_pred CHHHHHHHHHHHHHHHHHHhCCccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc Confidence 45556677777888899999998765542 222111 123334555556666666665555432211 Q ss_pred ccchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCccc Q lcl|Aclame:pro 317 DKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKG 394 (406) Q Consensus 317 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~ 394 (406) ..+...+.+.| .+..+..+.++.+.+++ |+++..-+.+++++-+-+....+++- .-.. +.....+....... T Consensus 418 ~~~~~~i~~~f~~~~p~n~~e~~d~~~kl~--G~iS~et~l~~l~~v~d~~~El~ri~--~E~~--~~~~~~~~~~~~~~ 491 (511) T protein:vir:78 418 NKDFNTVRYVYNRNLPKSLIEELKAYIDSG--GKISQTTLMSLFSFFQDPELEVKKIE--EDEK--ESIKKAQKGIYKDP 491 (511) T ss_pred ccccccceEEeCCCCCcCHHHHHHHHHHHh--ccCChHHHHHhCCCCCCHHHHHHHHH--HHHH--HHHHHHhhccccCC Confidence 11222233444 23445667777777774 78998878877643221111111100 0000 00000001111111 Q ss_pred CCCccCCCCCCC Q lcl|Aclame:pro 395 KGGEVNAEEDKS 406 (406) Q Consensus 395 ~gg~~~~~~~~~ 406 (406) .+.+++++++++ T Consensus 492 ~~~~~~~~~~~~ 503 (511) T protein:vir:78 492 RDINDDEQDDDT 503 (511) T ss_pred CCCCCCCCCCCc Confidence 121222222222 No 190 >protein:vir:95899 Length: 474 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1588 # MgeName: 71 # Cross-refs: genbank:acc:YP_240382;genbank:gi:66396046;genbank:GeneID:5133410 Probab=98.03 E-value=6.5e-06 Score=49.02 Aligned_cols=377 Identities=10% Similarity=0.037 Sum_probs=164.1 Q ss_pred Cccc--------ccccCCCCcchh-----------------hHHHhhcCCcc----ccc----------chhhhhccHHH Q lcl|Aclame:pro 1 MSFF--------QPLGTSKVSYDD-----------------YISSVLAGDVS----QKY----------LGVSALKNSDI 41 (406) Q Consensus 1 M~~f--------~~~~~~~~~~~~-----------------~~~~~~~~~~~----~~~----------~~~~a~~~~~v 41 (406) |-|- +.+........+ .+..+..|.-. ... .+..-+.++-. T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~ 86 (474) T protein:vir:95 7 MPWDKPYGEEVVEQMKPKVETQEEMIIRLINNHKQKLKDINVGQKYYDKDNDINYQAYKQDLHGNIDYTKPDWRITTNFH 86 (474) T ss_pred CCCCCCCCcchhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccchhhhcccccccccccccccchH Confidence 2221 111000000000 01111111100 000 00001112223 Q ss_pred HHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEee Q lcl|Aclame:pro 42 LTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQF 121 (406) Q Consensus 42 ~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~ 121 (406) ...|+..+.-+-.-|+.+...+.+ ....+..++. .........+..+.+.+|.+|.++.++. +|.+ .+.. T Consensus 87 k~Iv~~~~~yl~g~p~~~~~~~~~--~~~~l~~~~~------n~~~~~~~~l~~~~~~~G~~~~~~~~d~-~~~~-~i~~ 156 (474) T protein:vir:95 87 QNLVDQKVSYVAGKPVTYAHDDDK--VLDVIHQVLD------TRWDNKLIDILTAASNKGIDWLQVYINE-DGEL-KLFR 156 (474) T ss_pred HHHHHhhhhhhcccCceeccCChH--HHHHHHHHHh------ccHHHHHHHHHHHHhhCCeEEEEeeeCC-CCce-EEEE Confidence 445566666666666655322211 1122223321 1355666778899999999999988874 4655 4677 Q ss_pred cCCeeEEEEEccC--cceEEEE-EeecCCe--EEEEcceeeEeeccC----------------------C---------C Q lcl|Aclame:pro 122 YRPSETTVEETDN--HEIVYTF-TDMLTAK--QVKCFAHDVIHWKFF----------------------S---------H 165 (406) Q Consensus 122 l~p~~~~~~~~~~--g~~~~~~-~~~~~g~--~~~~~~~~vih~r~~----------------------~---------~ 165 (406) ++|..+.+.+++. +.+...+ .....+. ...+.+..+.++... + . T Consensus 157 ~~p~~~~~v~d~~~~~~~~a~ir~~~~~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~ 236 (474) T protein:vir:95 157 VPAEQAIPIWTDKEREQLNAFIRIFTFNGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFK 236 (474) T ss_pred EcccceEEEEcCCCCCceEEEEEEEeecCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEec Confidence 8898888877643 2322111 1112221 112334444443210 0 0 Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceee Q lcl|Aclame:pro 166 DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYT 245 (406) Q Consensus 166 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~ 245 (406) +...|.|.++.+...++..+.+.....+.+...+.|-.++... ..++...+...+ ...+++.++++.+++ T Consensus 237 nn~~~~~d~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~---~~~~~~~~~~~~-------~~~~~i~~~~~~~~~ 306 (474) T protein:vir:95 237 NNPEEVSDIWMYKSFVDAIDKRLSDVQNMFDESVELIYILRGY---EGEDLSEFMEGL-------KYYKAINVSSDGGVE 306 (474) T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhcCC---Ccccccchhhhh-------hccceeeccCCCcee Confidence 2234778787777777776665555555555555565444321 112222222222 123455566666666 Q ss_pred eccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhc-ccccchh--H----------HHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 246 PLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLG-VNSPNQS--V----------AQLMEDYVTNDLPFYFDAITSELGL 312 (406) Q Consensus 246 ~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg-~~~~~~n--~----------~~~~~~~~~~~i~P~~~~ie~~l~~ 312 (406) .+........+....+...+.|+..-++|..-.. ..++-|. . ....+..+...|.-+++.|...+.. T Consensus 307 ~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~g~ 386 (474) T protein:vir:95 307 TIQVEVPVASTKEYLDMMRAYIVEFGQGVDFQTDKFGSATSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDFNKI 386 (474) T ss_pred EEeccCCHHHHHHHHHHHHHHHHHHhCCcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC Confidence 6665555566677778888889999998854432 1221111 1 1223344455555555555443321 Q ss_pred hccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCc Q lcl|Aclame:pro 313 KTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGI 392 (406) Q Consensus 313 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~ 392 (406) ..+...+.+.|. +.......+.+..+.+.|+++...+++++++-.-+....+++---. -+.....+..... T Consensus 387 ----~~d~~~i~i~f~-~~~p~~~~e~a~~~~~~giiS~et~~~~lp~v~D~~~E~eri~~E~----~~~~~~~~~~~~~ 457 (474) T protein:vir:95 387 ----KLDAKEIEITFN-FNVMVNDLEQSQIGAQSQYLSKETLVRHHPWVDDPKAELERLDEEQ----LELNKQLPNLDDG 457 (474) T ss_pred ----CcccceeeEEec-CCCccCHHHHHHHHHHcCCCChHHHHHhCCCCCCHHHHHHHHHHHH----HHHHhhccccccc Confidence 112223344442 2222233334444556799999888888755321111111110000 0000000000000 Q ss_pred ccCCCcc--CCCCCCC Q lcl|Aclame:pro 393 KGKGGEV--NAEEDKS 406 (406) Q Consensus 393 ~~~gg~~--~~~~~~~ 406 (406) ...++.+ ..+.+++ T Consensus 458 ~~~~~~~~~~~~~~e~ 473 (474) T protein:vir:95 458 GADGAQQQQQSENNQS 473 (474) T ss_pred cCCCCCCcCCCCcccc Confidence 0001111 1111111 No 191 >protein:vir:96266 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1612 # MgeName: ROSA # Cross-refs: genbank:acc:YP_240308;genbank:gi:66395972;genbank:GeneID:5133343 Probab=98.03 E-value=6.5e-06 Score=49.02 Aligned_cols=377 Identities=10% Similarity=0.037 Sum_probs=164.1 Q ss_pred Cccc--------ccccCCCCcchh-----------------hHHHhhcCCcc----ccc----------chhhhhccHHH Q lcl|Aclame:pro 1 MSFF--------QPLGTSKVSYDD-----------------YISSVLAGDVS----QKY----------LGVSALKNSDI 41 (406) Q Consensus 1 M~~f--------~~~~~~~~~~~~-----------------~~~~~~~~~~~----~~~----------~~~~a~~~~~v 41 (406) |-|- +.+........+ .+..+..|.-. ... .+..-+.++-. T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~ 86 (474) T protein:vir:96 7 MPWDKPYGEEVVEQMKPKVETQEEMIIRLINNHKQKLKDINVGQKYYDKDNDINYQAYKQDLHGNIDYTKPDWRITTNFH 86 (474) T ss_pred CCCCCCCCcchhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccchhhhcccccccccccccccchH Confidence 2221 111000000000 01111111100 000 00001112223 Q ss_pred HHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEee Q lcl|Aclame:pro 42 LTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQF 121 (406) Q Consensus 42 ~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~ 121 (406) ...|+..+.-+-.-|+.+...+.+ ....+..++. .........+..+.+.+|.+|.++.++. +|.+ .+.. T Consensus 87 k~Iv~~~~~yl~g~p~~~~~~~~~--~~~~l~~~~~------n~~~~~~~~l~~~~~~~G~~~~~~~~d~-~~~~-~i~~ 156 (474) T protein:vir:96 87 QNLVDQKVSYVAGKPVTYAHDDDK--VLDVIHQVLD------TRWDNKLIDILTAASNKGIDWLQVYINE-DGEL-KLFR 156 (474) T ss_pred HHHHHhhhhhhcccCceeccCChH--HHHHHHHHHh------ccHHHHHHHHHHHHhhCCeEEEEeeeCC-CCce-EEEE Confidence 445566666666666655322211 1122223321 1355666778899999999999988874 4655 4677 Q ss_pred cCCeeEEEEEccC--cceEEEE-EeecCCe--EEEEcceeeEeeccC----------------------C---------C Q lcl|Aclame:pro 122 YRPSETTVEETDN--HEIVYTF-TDMLTAK--QVKCFAHDVIHWKFF----------------------S---------H 165 (406) Q Consensus 122 l~p~~~~~~~~~~--g~~~~~~-~~~~~g~--~~~~~~~~vih~r~~----------------------~---------~ 165 (406) ++|..+.+.+++. +.+...+ .....+. ...+.+..+.++... + . T Consensus 157 ~~p~~~~~v~d~~~~~~~~a~ir~~~~~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~ 236 (474) T protein:vir:96 157 VPAEQAIPIWTDKEREQLNAFIRIFTFNGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFK 236 (474) T ss_pred EcccceEEEEcCCCCCceEEEEEEEeecCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEec Confidence 8898888877643 2322111 1112221 112334444443210 0 0 Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceee Q lcl|Aclame:pro 166 DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYT 245 (406) Q Consensus 166 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~ 245 (406) +...|.|.++.+...++..+.+.....+.+...+.|-.++... ..++...+...+ ...+++.++++.+++ T Consensus 237 nn~~~~~d~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~---~~~~~~~~~~~~-------~~~~~i~~~~~~~~~ 306 (474) T protein:vir:96 237 NNPEEVSDIWMYKSFVDAIDKRLSDVQNMFDESVELIYILRGY---EGEDLSEFMEGL-------KYYKAINVSSDGGVE 306 (474) T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhcCC---Ccccccchhhhh-------hccceeeccCCCcee Confidence 2234778787777777776665555555555555565444321 112222222222 123455566666666 Q ss_pred eccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhc-ccccchh--H----------HHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 246 PLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLG-VNSPNQS--V----------AQLMEDYVTNDLPFYFDAITSELGL 312 (406) Q Consensus 246 ~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg-~~~~~~n--~----------~~~~~~~~~~~i~P~~~~ie~~l~~ 312 (406) .+........+....+...+.|+..-++|..-.. ..++-|. . ....+..+...|.-+++.|...+.. T Consensus 307 ~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~g~ 386 (474) T protein:vir:96 307 TIQVEVPVASTKEYLDMMRAYIVEFGQGVDFQTDKFGSATSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDFNKI 386 (474) T ss_pred EEeccCCHHHHHHHHHHHHHHHHHHhCCcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC Confidence 6665555566677778888889999998854432 1221111 1 1223344455555555555443321 Q ss_pred hccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCc Q lcl|Aclame:pro 313 KTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGI 392 (406) Q Consensus 313 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~ 392 (406) ..+...+.+.|. +.......+.+..+.+.|+++...+++++++-.-+....+++---. -+.....+..... T Consensus 387 ----~~d~~~i~i~f~-~~~p~~~~e~a~~~~~~giiS~et~~~~lp~v~D~~~E~eri~~E~----~~~~~~~~~~~~~ 457 (474) T protein:vir:96 387 ----KLDAKEIEITFN-FNVMVNDLEQSQIGAQSQYLSKETLVRHHPWVDDPKAELERLDEEQ----LELNKQLPNLDDG 457 (474) T ss_pred ----CcccceeeEEec-CCCccCHHHHHHHHHHcCCCChHHHHHhCCCCCCHHHHHHHHHHHH----HHHHhhccccccc Confidence 112223344442 2222233334444556799999888888755321111111110000 0000000000000 Q ss_pred ccCCCcc--CCCCCCC Q lcl|Aclame:pro 393 KGKGGEV--NAEEDKS 406 (406) Q Consensus 393 ~~~gg~~--~~~~~~~ 406 (406) ...++.+ ..+.+++ T Consensus 458 ~~~~~~~~~~~~~~e~ 473 (474) T protein:vir:96 458 GADGAQQQQQSENNQS 473 (474) T ss_pred cCCCCCCcCCCCcccc Confidence 0001111 1111111 No 192 >protein:vir:3964 Length: 453 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663672;genbank:gi:21716109;genbank:GeneID:951201 Probab=98.03 E-value=6.6e-06 Score=48.98 Aligned_cols=382 Identities=11% Similarity=0.026 Sum_probs=165.6 Q ss_pred Ccccccc-----cCCCC----------------cchhhHHHhhcCCc-------ccccchhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MSFFQPL-----GTSKV----------------SYDDYISSVLAGDV-------SQKYLGVSALKNSDILTATSIIAGDI 52 (406) Q Consensus 1 M~~f~~~-----~~~~~----------------~~~~~~~~~~~~~~-------~~~~~~~~a~~~~~v~~~i~~ia~~i 52 (406) |..=++. ..... ..-..+..+..|.. .....+..-+..+-....|+..+.-+ T Consensus 1 ~~~~~~~~~~~p~d~~~~~~~l~~~i~~~~~~~~r~~~~~~yy~g~~~i~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l 80 (453) T protein:vir:39 1 MKYKPPKLMTFPKDEPITNEVVTKFMEKHRLEVARYEYLKNMYRGIMAIDAEPTKDLWKPDNRLTVNFTKYIVDTFTGYF 80 (453) T ss_pred CeecCCcceEcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhcCCCccccCccceeecchHHHHHHHHhhhh Confidence 3321110 00000 00000111111110 00000001112233344556666655 Q ss_pred ccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEc Q lcl|Aclame:pro 53 ARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEET 132 (406) Q Consensus 53 a~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~ 132 (406) -.-|+.+-..+. .....+..+++. | ........+..+.+.+|.+|.++..+. +|.+ .+..++|..+.+.++ T Consensus 81 ~g~~~~~~~~d~--~~~~~l~~i~~~--N---~~~~~~~~~~~~~~~~G~~~~~v~~d~-~g~~-~i~~~~p~~~~~v~d 151 (453) T protein:vir:39 81 NGIPVKKSHSDK--ETLSKLQEFDNL--N---DMEDEESELAKMACIYGRAFELLYQNE-ETQT-NVIYNTPENMFMVYD 151 (453) T ss_pred cccCceeccCCh--HHHHHHHHHHHh--c---ChhHHHHHHHHHHhhcCeEEEEEEecC-CCce-EEEEEcccceEEEec Confidence 555654432221 112233444432 2 344577788899999999999988874 4655 366678888888776 Q ss_pred cCc--ceEEEEE--eecCCeE--EEEcceeeEeeccC------------C---------CCCccccCHHHHHHHHHHHHH Q lcl|Aclame:pro 133 DNH--EIVYTFT--DMLTAKQ--VKCFAHDVIHWKFF------------S---------HDTILGRSPLLSLGDEIDLQT 185 (406) Q Consensus 133 ~~g--~~~~~~~--~~~~g~~--~~~~~~~vih~r~~------------~---------~~~~~G~s~~~~~~~~i~~~~ 185 (406) +.. .+.+.+. ....... ..+.++.+.++... + .+...|.|.++.+...++..+ T Consensus 152 ~~~~~~~~~~ir~~~~~~~~~~~~~yt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa~~ 231 (453) T protein:vir:39 152 DTIKQEPLFAVRYGYDDDYKLYGEVYTKETTYALNGTMGFYNMTEQAPNPFDDLPVVEFYFNEERMSIFESVISLVNAFN 231 (453) T ss_pred CCCCCeEEEEEEEEEeCCeEEEEEEEeCCeEEEEEecCCceeeecccccCCCceeEEEecCCCCCCcchhhhHHHHHHHH Confidence 533 1222111 1111111 11233333333211 0 012357787877777776666 Q ss_pred HHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 186 GGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTA 265 (406) Q Consensus 186 ~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~ 265 (406) .+.....+.+...+.|-.++. .....++..+.++..- ...-.. ....+.+.++..++.......+....+...+ T Consensus 232 ~~~s~~~~~~~~~~~p~~~~~-g~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~lt~~~~~~~~~~~~~~l~~ 305 (453) T protein:vir:39 232 KAISEKANDVDYFSDQYLTFL-GAAVEEEDLKNIRSNR--VINYYG---ESSEAKNVDVKFLEKPDSDSQTENLLDRLTK 305 (453) T ss_pred HHHHHHHHHHHHhhCceeeee-cCCCCchhhhhhhhcc--eeeecC---CCCCCCCCceeEEeecCCHHHHHHHHHHHHH Confidence 655555555555556655554 3344444444432210 000000 0011234444444444444555667777788 Q ss_pred HHHHHhcCCHHHhcccccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhh--cccc Q lcl|Aclame:pro 266 QIAKALRVPSYKLGVNSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEF--DTRS 331 (406) Q Consensus 266 ~Ia~~fgvpp~~lg~~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~--~~~~ 331 (406) .|+..-++|..-.+..++-+. .....+..+..+|..+++.+...++..- ...+...+.+.| .+.. T Consensus 306 ~I~~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~-~~~~~~~i~v~f~~~~p~ 384 (453) T protein:vir:39 306 LIFQTTMVANISDESFGSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLYCELSTNVS-NKEAWKDIEYTFTRNEPK 384 (453) T ss_pred HHHHHhCCcccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CccccccceEEeCCCCCc Confidence 888888887433322111111 1233345556666666666655444221 111222333444 2344 Q ss_pred hhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCC--CccCCCCCC Q lcl|Aclame:pro 332 VTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKG--GEVNAEEDK 405 (406) Q Consensus 332 ~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~g--g~~~~~~~~ 405 (406) +..+.++.+.++ .|+++..-+.++++.-+-+....+++. .--.... ..........+| ++.+..+.+ T Consensus 385 ~~~~~a~~~~kl--~g~is~et~l~~l~~v~D~~~E~~ri~--~E~~~~~---~~~~~~~~~~~~~~~~~~~~~~e 453 (453) T protein:vir:39 385 DIKEQAETANIL--MGITSQETALSVISVIPDVQAEMEKIK--KEEASTA---IFDKDKQPSEKGTDTVVPETNEE 453 (453) T ss_pred CHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHH--HHHHHHH---HHHHhccCCCCCCCCCCCCcCCC Confidence 566777777766 578999888888864321111111110 0000000 000001111111 111111111 No 193 >protein:vir:9568 Length: 410 # NCBI annotation: gp34 # Family: family:all:524 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862873;genbank:gi:32469465;genbank:GeneID:1461310 Probab=97.97 E-value=8.5e-06 Score=48.37 Aligned_cols=343 Identities=11% Similarity=0.054 Sum_probs=153.2 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhh---hhccHHHHHHHH---HHHHhhcc-ceeEEEecCCcccccchHH Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVS---ALKNSDILTATS---IIAGDIAR-FPLVKKDVNGDIIHDEDIN 73 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---a~~~~~v~~~i~---~ia~~ia~-~~~~~~~~~~~~~~~~~~~ 73 (406) |+.+..+-.. ...+..|.......... .++ +....+++ ++.+++|. +-+.=++ ..+..+. T Consensus 1 l~~~~~r~~~-------~~~yY~g~~~~~~~~~~~p~~~~-~~~~~v~nw~~~~Vds~a~rl~~~Gf~-----~~d~~l~ 67 (410) T protein:vir:95 1 MNLYQSRVNL-------RYKHYAMQHYEAPTGITIPAHIR-AKYQAVLGWAAKGVDSLADRLIFRAFA-----NDDFNVT 67 (410) T ss_pred CCcchhhHHH-------HHHHhcCCCCccccchhccHHHH-hHHHhhcchhHHHHHHhHhhhcccccc-----CCCchHH Confidence 6666443221 11122221111001000 010 01112222 22222222 1222122 1122344 Q ss_pred HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCc-ceEEEE--Ee-ecCCeE Q lcl|Aclame:pro 74 YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNH-EIVYTF--TD-MLTAKQ 149 (406) Q Consensus 74 ~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g-~~~~~~--~~-~~~g~~ 149 (406) .++. -| +.......+..+.+++|.+|+.+..+. +|.| .+.+++|..+...++... ++.+.+ .. ...+.. T Consensus 68 ~i~~--~N---~ld~~~~~~~~~al~~G~sf~~v~~~~-d~~~-~i~~~sP~~~~~i~Dp~~~~~~~al~~~~~~~~~~~ 140 (410) T protein:vir:95 68 EIFD--RN---NPDIFFDSAILSALIGSCSFVYISKGE-DDEV-RLQVIESSNATGVIDPITGLLVEGYAVLARDDYNRP 140 (410) T ss_pred HHHh--hc---ChHHHHHHHHHHHHHhCceeEEEecCC-CCce-EEEEEcccceEEEEeCCCCceEEEEEEEEecCCCeE Confidence 4432 22 334556677889999999999988764 4665 577889998888776543 222211 11 112211 Q ss_pred ---EEEccee---------------------eEeeccCCC-CCccccCH----HHHHHHHHHHHHHHHHHHHHHHhcCCC Q lcl|Aclame:pro 150 ---VKCFAHD---------------------VIHWKFFSH-DTILGRSP----LLSLGDEIDLQTGGINTLIKFFKDGFS 200 (406) Q Consensus 150 ---~~~~~~~---------------------vih~r~~~~-~~~~G~s~----~~~~~~~i~~~~~~~~~~~~~~~ng~~ 200 (406) ..+.++. |++|.+.+. ..++|.|- +..+.+.+.....-......++.+ T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~l~~~~G~s~I~~~v~~l~da~~r~~~~~~~~~e~~a~--- 217 (410) T protein:vir:95 141 TLEAYFEPNATHFIPKDGEPYSVTNETGIPLLVPVIHRPDAVRPFGRSRITRAGMYYQKYAKRTLERADITAEFYSW--- 217 (410) T ss_pred EEEEEEeCCcEEEEeeCCccccccCCCCCcceEEecccccCCccCCccccchhHHHHHHHHHHHHHHHHHHHHHhcc--- Confidence 1222333 344443322 24567773 445445444444444445555543 Q ss_pred cceEEe-ecCCCCHHHHHHHHHHHHHHhcccccCceeecc-----CCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 201 SGILTM-KGAQLSGDARQRARQEFEKMREGSVGGSPLVFD-----STMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVP 274 (406) Q Consensus 201 ~~~~~~-~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~-----~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvp 274 (406) |..++. .+.+ .+..+.++... ++++.++ .+.++.++....-+ .|++..+.....||..=++| T Consensus 218 pqr~i~G~d~d--~~~~~~~~~~~---------~~i~~~~~~~~~~~~~v~q~~~~~l~-~~~~~l~~l~~~~a~~s~lP 285 (410) T protein:vir:95 218 PQKYILGLDPD--AEPMEKWKATV---------SSLLTISSSDKGVKPSVGQFTTASMS-PFTEQLRTAAAGFAGEMGLT 285 (410) T ss_pred hhheeeccCCC--CCcCchhhhhh---------hhheeccCCCCCCcceEEecCCCChH-HHHHHHHHHHHHHhhhcCCC Confidence 443333 2221 12222222222 2344443 23566666543322 47899999999999999999 Q ss_pred HHHhcccccc-hhHHH---HHHHHHHH---HHHHHHHHHHHHHHhhcc--C-----ccchhhhhhhh----ccc-chhHH Q lcl|Aclame:pro 275 SYKLGVNSPN-QSVAQ---LMEDYVTN---DLPFYFDAITSELGLKTL--N-----DKDRRLYHIEF----DTR-SVTGR 335 (406) Q Consensus 275 p~~lg~~~~~-~n~~~---~~~~~~~~---~i~P~~~~ie~~l~~~l~--~-----~~~~~~~~~~~----~~~-~~~~~ 335 (406) ++.||....+ ++.+. +...+... .-.-+-..+++.+-..+. . ..+.....+.+ +.. ..... T Consensus 286 ~~~lg~~~~NpsSa~Al~a~~~~L~~ka~~k~~~fg~~l~~~~rla~~i~~~~~~~~~~~~~~~v~W~p~~d~~~~s~a~ 365 (410) T protein:vir:95 286 LDDLGFVSDNPSSVEAIKASHENLRLAGRKAQRSLGAGLLNVAYVAACLRDEFRYTRSQFVRTAVKWEPLFEADANTMTM 365 (410) T ss_pred HHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccceeeEEeeecCCcchhhHHH Confidence 9999975543 22211 11111111 111111222222211110 0 01111112222 111 12455 Q ss_pred HHHHHHHHHhC--CCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCc Q lcl|Aclame:pro 336 NVDEIVKLVNN--QILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE 398 (406) Q Consensus 336 ~~~~~~~~~~~--g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~ 398 (406) .++++.+++++ |+.+..-+++++|+.+-+. . +.. .+ + + ... |+ T Consensus 366 ~aDa~~Kl~~a~~g~~~~~~~~~~lg~~~~~~--~-~~~-------~~---e-~---~~~---g~ 410 (410) T protein:vir:95 366 IGDGVVKLNQALPGYINAETIRDLTGIAGDMS--A-KPV-------VS---E-G---GSN---GE 410 (410) T ss_pred HHHHHHHHHHhccCCccHHHHHHhcCCChHHH--H-HHH-------HH---H-H---HhC---CC Confidence 67788888887 7888888999999975311 0 110 00 0 0 000 11 No 194 >protein:vir:79043 Length: 479 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110721;genbank:gi:134287338;genbank:GeneID:4955217 Probab=97.94 E-value=1e-05 Score=47.96 Aligned_cols=374 Identities=12% Similarity=-0.028 Sum_probs=176.0 Q ss_pred Cccc-----ccc-cCCCCcchhhHHHhhcCCccc------------ccc----hhhhhccHHHHHHHHHHHHhhccceeE Q lcl|Aclame:pro 1 MSFF-----QPL-GTSKVSYDDYISSVLAGDVSQ------------KYL----GVSALKNSDILTATSIIAGDIARFPLV 58 (406) Q Consensus 1 M~~f-----~~~-~~~~~~~~~~~~~~~~~~~~~------------~~~----~~~a~~~~~v~~~i~~ia~~ia~~~~~ 58 (406) +..| +.. .+...+.-..+..+..|.... ... +..-+.++-....|+..+.-+-.-|+. T Consensus 20 ~~~~~~~~i~~~~~~~~~~~~~~~~~yy~g~~~i~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~Ivd~~~~~l~g~p~~ 99 (479) T protein:vir:79 20 STINLVKVIEHYILKHRPEKYKQGEEYYYGNTDVNNKRRYYLLDGAKVDDFTKVNNKAINNYHKLLVDQKVGYSVGNPIV 99 (479) T ss_pred ChhHHHHHHHHHHhhhhHHHHHHHHHHhccCCcccccccccccccccccccccCcceeecchHHHHHHHHHhhhhcCCce Confidence 2211 111 111111111222222221100 000 001122333445666666666666765 Q ss_pred EEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCc--c Q lcl|Aclame:pro 59 KKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNH--E 136 (406) Q Consensus 59 ~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g--~ 136 (406) +...+.+ . ..+...+.. | ........++...+.+|.+|.++..+. +|++. +..++|..+.+.+++.. . T Consensus 100 ~~~~~~~--~-~~~~~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~-~~~~~-i~~~~p~~~~~v~d~~~~~~ 169 (479) T protein:vir:79 100 FNADDDN--L-TKLLNDLLG--E---EFDDTITELYLNASNKGVEWLHPYINR-KGEFK-YVIIPAEEAIPIWDSKRQRE 169 (479) T ss_pred eccCCHH--H-HHHHHHHHh--c---CHHHHHHHHHHHHHhcCeEEEEEEeCC-CCceE-EEEEccceeEEEEeCCCCCc Confidence 5322211 1 112222221 2 345666778889999999999888774 46654 77788988888876543 2 Q ss_pred eEEE----EEeecCCeE----EEEcceeeEeeccC------------------------------------C----CCCc Q lcl|Aclame:pro 137 IVYT----FTDMLTAKQ----VKCFAHDVIHWKFF------------------------------------S----HDTI 168 (406) Q Consensus 137 ~~~~----~~~~~~g~~----~~~~~~~vih~r~~------------------------------------~----~~~~ 168 (406) +... ......+.. ..+.++.+.+++.. | .+.. T Consensus 170 ~~~~ir~y~~~~~~~~~~~~~e~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~ 249 (479) T protein:vir:79 170 LVAFIRFYYIEDIDGNKIKRVEYYTENDITYFIERGNSFIQEFLYDEYGKMTDIQEGHFRINNKEQGWGKVPFIPFKNNE 249 (479) T ss_pred eEEEEEEEEEeecCCceEEEEEEEeCCcEEEEEecCCcccccccccccccccccccccccccccccCCCcccEEEecCCC Confidence 2221 111122211 12233444443210 0 0123 Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeecc Q lcl|Aclame:pro 169 LGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLE 248 (406) Q Consensus 169 ~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~ 248 (406) .|.|.++.+...++..+.+.....+.+...+.|-.++........ +.+... ...++++.++++.+++-+. T Consensus 250 ~g~sd~~~v~~liDa~d~~~S~~~~~~~~~~~~~~v~~g~~~~~~---~~~~~~-------~~~~~~i~~~~~~~~~~l~ 319 (479) T protein:vir:79 250 KCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTSL---QEFIDN-------IRYYKSIKVDGGGGVDKLE 319 (479) T ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCcccc---ccchhh-------hhhccceecCCCCcceEEe Confidence 577888888888877776665556566666667666543221111 111111 1123455666666666665 Q ss_pred CChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 249 IDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLN 316 (406) Q Consensus 249 ~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~ 316 (406) .......+....+...+.|+..-++|..-.+..++-|. .....+..+...+.-+++.|...+..+-.. T Consensus 320 ~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~gn~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~ 399 (479) T protein:vir:79 320 INIPVEAKKELLDRLEKNIIIFGQGVNPESQNTGDKSGVALKFLYSLLDLKCSKTEKKFKKAIRELLWFVCEYLKISGNK 399 (479) T ss_pred ccCCHHHHHHHHHHHHHHHHHHhCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC Confidence 55555556667777888888888888655543222111 123334555556666666665555433222 Q ss_pred ccchhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCccc Q lcl|Aclame:pro 317 DKDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKG 394 (406) Q Consensus 317 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~ 394 (406) ..+...+.+.|. ...+..+.++.+.++ .|+++...+.++++. ++++..+ +.-+.............. T Consensus 400 ~~~~~~i~i~f~~~~p~~~~~~a~~~~kl--~g~iS~et~l~~l~~--v~d~~~E-------~~ri~~E~~~~~~~~~~~ 468 (479) T protein:vir:79 400 SYDYKTVQITFNHSMIINEAEKIDMAAKS--TGIVSDETIVSNHPW--VEDVNDE-------LERLKKQEDTQKEYDDLI 468 (479) T ss_pred ccccccceEEeCCCCCcCHHHHHHHHHHH--hccCcHHHHHHhCCC--CCCHHHH-------HHHHHHHHHHHHHHHhcc Confidence 222223344442 334566677777766 489998888887754 2211110 011111111111111111 Q ss_pred CCCccCCCCCCC Q lcl|Aclame:pro 395 KGGEVNAEEDKS 406 (406) Q Consensus 395 ~gg~~~~~~~~~ 406 (406) . ++.++..+++ T Consensus 469 ~-~~~~~~~~e~ 479 (479) T protein:vir:79 469 P-NNQDGVIDET 479 (479) T ss_pred C-cccCCCcCcC Confidence 1 2222222222 No 195 >protein:vir:4073 Length: 279 # NCBI annotation: minor structural protein # Family: family:all:11744 # MgeID: mge:85 # MgeName: c2 # Cross-refs: genbank:acc:NP_043552;genbank:gi:9628686;genbank:GeneID:1261159 Probab=97.91 E-value=1.5e-07 Score=57.99 Aligned_cols=277 Identities=11% Similarity=0.053 Sum_probs=133.7 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKS 80 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~P 80 (406) |++|+- .+-|.+++=..|.|.++..+-- -..+.-|+..-- T Consensus 1 ~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 40 (279) T protein:vir:40 1 MSLFNL---------------------------------------SRRAEDVSFSTFTVQDPTTDLL-LGKLLGLVSYFD 40 (279) T ss_pred Cccccc---------------------------------------chhhcccceeeeeecCcchhHH-HHHHHHHHHHhh Confidence 444432 1223333333333322111100 001111111122 Q ss_pred cccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCCeEEEEcceeeEee Q lcl|Aclame:pro 81 TSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAKQVKCFAHDVIHW 160 (406) Q Consensus 81 n~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~vih~ 160 (406) |-..+-..-++.+.. +.+.|.-. |-++ .+|--.-...+.++ .+-......+.+.+++|-.++..| T Consensus 41 ~~~~~~~~~~~~~~~-~~~~~~~~-~~~~--~~~~~~~~~~~~~d-----------~fn~~vr~~~~~~vtVP~~Dv~Ii 105 (279) T protein:vir:40 41 NVDYSEASKLEDLFY-WALQGKEV-YRVW--YGGFKYYAQRVNAD-----------QFNIVVREPNRREVTIRTNDYEML 105 (279) T ss_pred cccchhhhhhhhhhh-hhhcccee-ehhh--hhhHHHHHhhcCcc-----------hhhhheecCCcceeEeecchhhhh Confidence 222222222222222 22344321 1111 11110000111111 111112223334456666676665 Q ss_pred ccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCC-CCHHHHHHHHHHHHHHhccccc-Cceeec Q lcl|Aclame:pro 161 KFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQ-LSGDARQRARQEFEKMREGSVG-GSPLVF 238 (406) Q Consensus 161 r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~g~~~-~~~~vl 238 (406) - ++++|.-+- .....++++.. ....++ .+.+..+++++.+-+ ..++..++.+.+++++..+.+. +++.++ T Consensus 106 e----NPlv~v~~e-e~~kM~~la~n--ai~~KL-D~~~qIk~fIKTd~d~glee~kekaR~rIk~mlalAk~~nGityi 177 (279) T protein:vir:40 106 L----NPFYGANPQ-RFGVMFGMASN--GIGRRL-DSQAQIKIYWKTKVSSGLKEVWDRIRERLTQQQQLAREFNGVSVI 177 (279) T ss_pred h----cchheeccc-hhhHHHHHHHh--hhhhhh-cccceeeeEEecCcchhHHHHHHHHHHHHHHHHHHHHhcCCeeee Confidence 4 334555433 22333333322 222333 444555566665544 4567788899999999987653 779999 Q ss_pred cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcc Q lcl|Aclame:pro 239 DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDK 318 (406) Q Consensus 239 ~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~ 318 (406) +.|-++++|..+..-. ..+-.++.+...++.+|||..+| +++..|.++.+|+..+|.|++++.+-.|.. . T Consensus 178 d~~ddItQL~kDYSts-lk~die~lkS~l~Sq~GinekIL----~GsAtE~q~iAyy~rtVePILkQyek~liY-----~ 247 (279) T protein:vir:40 178 GSDDDIKQIQPDYSGS-LQNDANLAIEIALSEYGMPRELL----YGQSNEVTIIAFAIQKVLPLLKQHDKNIIF-----N 247 (279) T ss_pred cCCceeEeeccccccc-cHHHHHHHHHHHHhhcCCchhhc----cccCchhhhhhHHHhhHHHHHHHhcccccc-----h Confidence 9999999998876544 34555778888999999999999 555568999999999999999997775542 1 Q ss_pred chhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCe Q lcl|Aclame:pro 319 DRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDR 370 (406) Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~ 370 (406) + .+.+.+-+ +-..+|.+..- -....-+|+.. . T Consensus 248 ~--E~fv~y~t------------tta~gg~~~s~--~~~~~~~~~~~----~ 279 (279) T protein:vir:40 248 Q--ENFVAYIS------------TTAKGGAIESK--SSKRDSEPVGN----D 279 (279) T ss_pred h--hhhhhhhe------------ecccCcccccc--cccccCCCCCC----C Confidence 1 11111111 11122222111 11122334421 1 No 196 >protein:vir:103219 Length: 201 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1605 # MgeName: JK06 # Cross-refs: genbank:acc:YP_277473;genbank:gi:71834115;genbank:GeneID:3562330 Probab=97.90 E-value=1e-06 Score=53.46 Aligned_cols=179 Identities=12% Similarity=0.129 Sum_probs=88.2 Q ss_pred EEeecC--CCCHHHHHHHHHHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc Q lcl|Aclame:pro 204 LTMKGA--QLSGDARQRARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV 280 (406) Q Consensus 204 ~~~~~~--~~~~e~~~~~~~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~ 280 (406) |++.++ .........+++++...... +..+.+.+...+-+|+.++.+...+ .+........||++-|||-..|-+ T Consensus 1 V~k~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ld~~~e~~e~~~~~lsGl--~d~l~~~~~~iaa~s~iP~t~LfG 78 (201) T protein:vir:10 1 MWKAKGLADLCDDSDGAARLRLAQVDNNSGVGQAIGIDADSEEYNVLNSDIGGI--DTFLSQKFDRIVALSGIHEIILKG 78 (201) T ss_pred CccchHHHHHhcCChHHHHHHHHHHHHhhhhhhhheeecCCcceeeeecCcCCh--HHHHHHHHHHHHhHhcCchhhhcC Confidence 332221 01111122344455433322 1223455555667788877766544 345566667899999999988732 Q ss_pred -cc-----cc----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcc--cch-------hHHHHHHHH Q lcl|Aclame:pro 281 -NS-----PN----QSVAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDT--RSV-------TGRNVDEIV 341 (406) Q Consensus 281 -~~-----~~----~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~ 341 (406) +. ++ .|+-+......+.-+.|.++.+-+.+. .+ ..|.++|.. ..+ .++.++++. T Consensus 79 ~sp~Glnatge~d~~nyyd~i~~~Qe~~l~p~le~l~~~~~----~~---~~~~~~f~pL~~~s~kekAei~~~~a~a~~ 151 (201) T protein:vir:10 79 KNVGGVSASQNTALETFYGYVDRKRKAELLPLLEFLLPFIV----TE---QEWSVEFNPLSQVSDKDKSEILEKNVNSVA 151 (201) T ss_pred CCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CC---CCceEeeCCCCCCCHHHHHHHHHHHHHHHH Confidence 22 11 233333344445667777766554322 11 235566642 111 234567788 Q ss_pred HHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCC Q lcl|Aclame:pro 342 KLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 342 ~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~ 405 (406) .++++|+++++|+|+.|--.+..+ +++.+.++.+... ....... +..+++ T Consensus 152 ~~~~~g~i~~~e~r~~L~~~~~~~------~~~~~~~~~~~~~-------~e~~dp~-~~~~~~ 201 (201) T protein:vir:10 152 ALIAAGIIDADEARDTLRAISTEV------KIGEGSIQTEVVI-------NESEDPL-DVSANN 201 (201) T ss_pred HHHHcCCCCHHHHHHHHHhcCCcC------CCCCCCCCccccc-------cccCCCC-CCCCCC Confidence 899999999999999986654422 2222222111100 0000011 111111 No 197 >protein:vir:96494 Length: 501 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1620 # MgeName: 2972 # Cross-refs: genbank:acc:YP_238488;genbank:gi:66391764;genbank:GeneID:5176916 Probab=97.88 E-value=1.3e-05 Score=47.39 Aligned_cols=393 Identities=12% Similarity=0.043 Sum_probs=176.4 Q ss_pred CcccccccC-------CCCcchhhHHHhhcCCccc---------ccchhhhhccHHHHHHHHHHHHhhccceeEEEecCC Q lcl|Aclame:pro 1 MSFFQPLGT-------SKVSYDDYISSVLAGDVSQ---------KYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNG 64 (406) Q Consensus 1 M~~f~~~~~-------~~~~~~~~~~~~~~~~~~~---------~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 64 (406) +..+..... ...+.-..+..+..|.... ...+..-+..+-...+|+..+.-+-.-|+.+.-.+. T Consensus 38 ~~~~~~i~~~i~~~~~~~~~r~~~~~~yY~g~~~~i~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~g~p~~~~~~~~ 117 (501) T protein:vir:96 38 VNNWELLKNFINHHKLRQAPRIQELLDYARGENHDVLKSGRRKDNEMADKRAVHNYGRMISKFKTGYLAGNPIRVEYDDN 117 (501) T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCccccCccccccceeecchHHHHHHHHhhhhcccCeeEeeCCc Confidence 332211110 0001111112222221110 001111122333445666666666666766543322 Q ss_pred cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccC--cceEEE-- Q lcl|Aclame:pro 65 DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN--HEIVYT-- 140 (406) Q Consensus 65 ~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~--g~~~~~-- 140 (406) . ..+.+...|. +.............+..+.+.+|.+|.++.++. +|.+ .+..++|..+.+.+++. +.+... T Consensus 118 ~--~~~~~~~~l~-~~~~~n~~~~~~~~~~~~~~~~G~a~~~v~~de-dg~~-~i~~~~p~~~~~v~d~~~~~~~~~~v~ 192 (501) T protein:vir:96 118 D--DNSQNDDAIK-RIGRINDLDSLNRTLIRDLSQTGRAYEVIYRSE-YDET-RIKRLSPLETFVIYDNSLEDNSIAAVR 192 (501) T ss_pred c--chhHHHHHHH-HHHHhcCHHHHHHHHHHHHhhcCeEEEEEEEcC-CCce-EEEEEccceeEEEEcCCCCCceEEEEE Confidence 1 1223333332 333334556788889999999999999988874 4655 46778999998888764 333221 Q ss_pred --EEeecCCe--EE-EEcceeeEeecc-----------CC---------CCCccccCHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 141 --FTDMLTAK--QV-KCFAHDVIHWKF-----------FS---------HDTILGRSPLLSLGDEIDLQTGGINTLIKFF 195 (406) Q Consensus 141 --~~~~~~g~--~~-~~~~~~vih~r~-----------~~---------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~ 195 (406) ......+. .. .+.++.+.++.. ++ .+...|.|.++.+...++..+.+.....+.+ T Consensus 193 ~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~d~~~s~~~~~~ 272 (501) T protein:vir:96 193 YYNRGTLQSAKDVVEIYTDEHIYTLDASDDFNEISVTTHAFGTVPITEYLNNIDGIGDYETELYLIDLYDSAESDTANHM 272 (501) T ss_pred EEEeecCCCcEEEEEEEcCCcEEEEeeCCCceeccccccCCCccceEEecCCccCCCchhhhHHHHHHHHHHHHHHHHHH Confidence 11111111 11 233444333321 00 1123588888888888887776666666666 Q ss_pred hcCCCcceEEeecCCCCH-HHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 196 KDGFSSGILTMKGAQLSG-DARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVP 274 (406) Q Consensus 196 ~ng~~~~~~~~~~~~~~~-e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvp 274 (406) ...+.|-.++........ +.....+.. ..... ...+.......+.++.-++....+..+....+...+.|+..-++| T Consensus 273 ~~~~~~~l~i~G~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p 350 (501) T protein:vir:96 273 SDMADAILAIYGDLALPKGMQASDMKRT-RLMQL-KPPKSADGKEGTVKAEYLTKSYDVSGAEAYKTRLNRDIHIFTNTP 350 (501) T ss_pred HHhcCceeeeecccccCcccchhhhhhc-Ceeee-cccccccccccCcceeeEeccCCHHHHHHHHHHHHHHHHHHhCCc Confidence 666666655553322221 111111110 00000 011111123345555556555555556677778888899888998 Q ss_pred HHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ccchhhhhhhh--cccchhHHHHH Q lcl|Aclame:pro 275 SYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLN-DKDRRLYHIEF--DTRSVTGRNVD 338 (406) Q Consensus 275 p~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~-~~~~~~~~~~~--~~~~~~~~~~~ 338 (406) ..-.+. .++-|. .....+..+..+|.-+++.|...+...-.. ..+...+.+.| .+..+..+.++ T Consensus 351 ~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~i~f~~~~p~n~~e~ad 430 (501) T protein:vir:96 351 DMSDTNFSGNTSGEALKYKLFGLDQDRVDTQSQFTKGLKRRYRLAARIGSLVNEFKDFDESLLKITFTPNLPKSLNEQVS 430 (501) T ss_pred ccCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccceEEeCCCCCcCHHHHHH Confidence 765543 222111 122333555556666665555555432211 11112233444 23445667777 Q ss_pred HHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCC------CccCCCCCCC Q lcl|Aclame:pro 339 EIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKG------GEVNAEEDKS 406 (406) Q Consensus 339 ~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~g------g~~~~~~~~~ 406 (406) .+.++. |+++..-+.+++++-.-+....+++- .-....+. ........+..| .+.+.++.++ T Consensus 431 ~~~kl~--g~iS~et~~~~l~~v~D~~~E~~ri~--~E~~~~~~--~~~~~~~~~~~~~~~~~~~e~~~d~~e~ 498 (501) T protein:vir:96 431 ILTGLG--GQVSQETALSLSGLVESPNEELDKIN--KEMSEIDF--KGYSNDFNEHVGKYTDEVKETHTDDFER 498 (501) T ss_pred HHHHHh--ccCchHHHHHhCCCCCCHHHHHHHHH--HHHHHhhc--cccccchhhcccccCCcCCCCCCCcccc Confidence 777764 78888777777754221111111110 00000000 000000000111 0111111111 No 198 >protein:vir:106571 Length: 499 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1598 # MgeName: Lj965 # Cross-refs: genbank:acc:NP_958580;genbank:gi:41179240;genbank:GeneID:2717107 Probab=97.85 E-value=1.5e-05 Score=47.05 Aligned_cols=383 Identities=13% Similarity=0.106 Sum_probs=170.4 Q ss_pred Cccccccc------C--------------CCCcchhhHHHhhcCCcc----c---ccchhhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MSFFQPLG------T--------------SKVSYDDYISSVLAGDVS----Q---KYLGVSALKNSDILTATSIIAGDIA 53 (406) Q Consensus 1 M~~f~~~~------~--------------~~~~~~~~~~~~~~~~~~----~---~~~~~~a~~~~~v~~~i~~ia~~ia 53 (406) |.++=... . ...+.-..+..+..|... . ...+..-+.++-...+|+..+.-+- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~l~~Yy~g~~~i~~~~~~~~~~~~~ki~~n~~~~Iv~~~~~~l~ 80 (499) T protein:vir:10 1 MAVVIDKDLLDDVNEPNIEAINYAIRELQNRKKRLDKLSDYYNGKQEIEKHEFDNATVEAANVMVNHAKYITDMNVGFMT 80 (499) T ss_pred CccchhhhHHhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcCCcCcCCCCcceeecchHHHHHHHHhhhhc Confidence 44331000 0 000000112222222110 0 0000111112233445666665555 Q ss_pred cceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCcee----------------E Q lcl|Aclame:pro 54 RFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQA----------------L 117 (406) Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~----------------~ 117 (406) .-|+.+...+.+ ....+..++.. .....+...+....+.+|.+|.++..+.. |.+ . T Consensus 81 g~p~~~~~~~~~--~~~~l~~~~~~-----n~~~~~~~~~~~~~~~~G~~~~~v~~~~~-g~~~~~~~~~~~~~~~~~~~ 152 (499) T protein:vir:10 81 GNPVKYVAEKGK--NIDDILEVFNQ-----IDIHKHDIELEKDLSVFGYGYELLYLKKT-DPISVRDELGNEKLTPNTEL 152 (499) T ss_pred ccCceeecCChh--HHHHHHHHHhh-----cCHhHHHHHHHHHHHhcCceEEEEEeccc-ccccccccccccccccccce Confidence 556654322211 12233333321 23446778888999999999998887744 322 3 Q ss_pred EEeecCCeeEEEEEccCcc--e----EEEEEeec-CCe---E-EEEcceeeEeeccC-----------------C----- Q lcl|Aclame:pro 118 QFQFYRPSETTVEETDNHE--I----VYTFTDML-TAK---Q-VKCFAHDVIHWKFF-----------------S----- 164 (406) Q Consensus 118 ~l~~l~p~~~~~~~~~~g~--~----~~~~~~~~-~g~---~-~~~~~~~vih~r~~-----------------~----- 164 (406) .+..++|..+.+.+++... . .++..... .+. . ..+.++.|.+++.. + T Consensus 153 ~~~~v~p~~~~~v~~d~~~~~~~~~i~~~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vP 232 (499) T protein:vir:10 153 KIEVIDPRATVVVCDDTVEHDPLFAVFTQEKKDLEGNTNGYSITVYMPQRIVEYRTKTTMEVSANDPIVYDGENLFGAVP 232 (499) T ss_pred EEEEEcccceEEEecCCCCcceEEEEEEEEEeecCCCceEEEEEEEeCCeEEEEEecCCccccCcceecccccCCCCccc Confidence 4667788887777665432 1 11111111 111 1 12344444443210 0 Q ss_pred ----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHH--HHHHHHHHHHHHhcccccCceee- Q lcl|Aclame:pro 165 ----HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGD--ARQRARQEFEKMREGSVGGSPLV- 237 (406) Q Consensus 165 ----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e--~~~~~~~~~~~~~~g~~~~~~~v- 237 (406) .+...|.|-++.+...++..+.+.....+.+...+.|-.+++.. ...++ .....+ .+.+.. T Consensus 233 vv~~~n~~~~~~d~e~v~~liD~~~~~~S~~~~~~~~~~~~~lv~~G~-~~~~~~~~~~~~~-----------~~~~~~~ 300 (499) T protein:vir:10 233 IIEFRNNEERQGDFEQLISLIDAYNLLQTDRISDKEAFVDALLVTFGF-GLGDDKDDIQRLK-----------RGAIEAP 300 (499) T ss_pred eEEecCCCCCCCchHhHHHHHHHHHHHHHHHHHHHHHhcCceeeeecC-ccccccchhhhhh-----------hcceecc Confidence 01234677777777777776666655555566666676665532 22211 111111 112222 Q ss_pred -ccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHH---Hhcccccchh----------HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 238 -FDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSY---KLGVNSPNQS----------VAQLMEDYVTNDLPFYF 303 (406) Q Consensus 238 -l~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~---~lg~~~~~~n----------~~~~~~~~~~~~i~P~~ 303 (406) .+++.+++.+........+....+...+.|...-++|.. -++...++-. .....+..+..++.-++ T Consensus 301 ~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~gn~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~ 380 (499) T protein:vir:10 301 PREEGADIEWLTKSFDETQVNLLSQSIENDIHKISYVPNMNDEKFMGNVSGEAMKFKLFGLENLLSIKQRYFFDGLRRRL 380 (499) T ss_pred CCCCCCcceEEeccCCHHHHHHHHHHHHHHHHHHhCcccCCchhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 345666666665444455566667777778777777732 2222111111 12334455666666666 Q ss_pred HHHHHHHHhhccCccchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeee--------- Q lcl|Aclame:pro 304 DAITSELGLKTLNDKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQ--------- 372 (406) Q Consensus 304 ~~ie~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~--------- 372 (406) +.|...++..- ...+...+.+.| .+..+..+.++.+.++ .|+++..-++++++.-.-+....+++. T Consensus 381 ~li~~~~~~~~-~~~d~~~i~i~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~l~~v~d~~~E~~ri~~E~~~~~~~ 457 (499) T protein:vir:10 381 KLIQTIVNIKG-ANDDASGCKISLVANIPSNLSDVVNNVKNA--DGIIPRKYTYSWLPDVDNPQDVIDEMNQQDAETIKK 457 (499) T ss_pred HHHHHHHhccC-CccccccceEEeCCCCCCCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH Confidence 66666554321 111222233333 3344566777777776 578898888887754221111111111 Q ss_pred -----eccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 373 -----SSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 373 -----~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) ...+..+.+..+..++......+++.+|..+++. T Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (499) T protein:vir:10 458 NQEALRGQDPDRLELEDKQDDSSENDKEAGSNHNQSHRT 496 (499) T ss_pred HHhhhccCCCCCCCCCCCCcccCCCCCCCccccccCCCC Confidence 0001111111111111112222223333333444 No 199 >protein:vir:38 Length: 496 # NCBI annotation: putative portal protein # Family: family:all:898 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463464;swissprot:trembl:q9t1c0;genbank:gi:16798786;uniprot:Q9T1C0;genbank:GeneID:922383 Probab=97.85 E-value=1.5e-05 Score=47.04 Aligned_cols=379 Identities=11% Similarity=0.061 Sum_probs=174.2 Q ss_pred Cccccc---cc-CCCCcch----h---hHHHhhcCCccc----c--c----chhhhhccHHHHHHHHHHHHhhccceeEE Q lcl|Aclame:pro 1 MSFFQP---LG-TSKVSYD----D---YISSVLAGDVSQ----K--Y----LGVSALKNSDILTATSIIAGDIARFPLVK 59 (406) Q Consensus 1 M~~f~~---~~-~~~~~~~----~---~~~~~~~~~~~~----~--~----~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 59 (406) |++-+- .. ....+.. . .+..+..|.... . . .....+...-...+++..|+-+..-|..+ T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~yy~g~~~~~~~~~~~~~~~~~~~~~~~~n~~k~i~~~~a~~l~~~p~~i 95 (496) T protein:vir:38 16 MGLLKALKDVKDHKKVNANDEDYKYIDMWKRLYQGHYAEWHNLNYEHNGNPVNRRQLSMNLPKVTAKYMSKLLFNEKVKI 95 (496) T ss_pred hccchhhHHHHhcCCCcCCHHHHHHHHHHHHHhcCCCchhhcchhccCCCccccceeecchHHHHHHHHhhhhhCCcceE Confidence 543211 11 1111111 1 122222221110 0 0 00011222333456666776666656554 Q ss_pred EecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceE- Q lcl|Aclame:pro 60 KDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIV- 138 (406) Q Consensus 60 ~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~- 138 (406) .-.+ + .....+..++. .....+-...++.+.+..|.+|+.+..|.. |.+ .+..++|..+.+...+.+.+. T Consensus 96 ~~~d-~-~~~e~l~~~~~-----~n~f~~~~~~~~~~a~~~G~~~~~~~~D~~-~~~-~i~~v~~~~~~P~~~~~~~~~~ 166 (496) T protein:vir:38 96 NIDD-K-AAEEFVLNVLK-----TNGFTKNMERYIEYGEAMGGFVIKVYHDGN-KNV-KVSFATADCMYPLSNDSENVDE 166 (496) T ss_pred eeCC-h-HHHHHHHHHHh-----ccCHHHHHHHHHHHHhhhCcEEEEEEEcCC-CcE-EEEEEcccceEEEEecCCcEEE Confidence 3222 1 11122223332 234566677888899999999999988754 554 356677777776555555431 Q ss_pred --EEEEeecC--------------------------------CeEEEE----------------cceeeEeeccC----- Q lcl|Aclame:pro 139 --YTFTDMLT--------------------------------AKQVKC----------------FAHDVIHWKFF----- 163 (406) Q Consensus 139 --~~~~~~~~--------------------------------g~~~~~----------------~~~~vih~r~~----- 163 (406) +....... |..+.+ +.--+.|++.+ T Consensus 167 ~~f~~~~~~~~~~y~~le~h~~~~~~~~I~~~~y~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~N~~ 246 (496) T protein:vir:38 167 CVIANSFHKNNKYYTLLEWNEWQGDVYTVTTELYQSDDPNELGTKVSLTLLFDDIEPVVPLPDFTRPTFIYIKPNIANNK 246 (496) T ss_pred EEEEEEEEeCCeEEEEEEEEEEeCceEEEEEEEEecCCccccCccccccccccccccceeecCCCcceEEEecCCccccc Confidence 00000000 100000 00012334422 Q ss_pred CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEe-----ecCCCCHHHHHHHHHHHHHHhcccccCceeec Q lcl|Aclame:pro 164 SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTM-----KGAQLSGDARQRARQEFEKMREGSVGGSPLVF 238 (406) Q Consensus 164 ~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~-----~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl 238 (406) ....++|+|.+.-+...++..+.+.....+-++.+ .+...+. .......+....+....+..... ...-. T Consensus 247 ~~~~p~G~Sd~~~~~~lid~ld~~~s~~~~~~~~~-~~~i~v~~~~l~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~ 321 (496) T protein:vir:38 247 NLTSPLGISVYANALDTLKTLDLMFDSYYQEFKLG-KKKVLVPSSFVKTAVNLDGSTTQYFDSTDEAFFLY----QGDQD 321 (496) T ss_pred ccCCcCCCchHhhHHHHHHHHHHHHHHHHHHHhhc-ccceecchHHhhccCCCCCccccCCCCccceEEEe----ecCCC Confidence 11246799999999999887777766665666653 3333331 00000000000000000000000 00011 Q ss_pred cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccch-hHHH-------------HHHHHHHHHHHHHHH Q lcl|Aclame:pro 239 DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQ-SVAQ-------------LMEDYVTNDLPFYFD 304 (406) Q Consensus 239 ~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~-n~~~-------------~~~~~~~~~i~P~~~ 304 (406) +++..++.++.....-++.+..+....+|+...|+||..+|...++. +..+ ..+..++.+|..+++ T Consensus 322 ~~~~~i~~~~~~i~~e~~~~~l~~~l~~i~~~~g~~~~~f~~~~~g~~tAtei~~~~~~l~~~~~~~~~~~~~~l~~l~~ 401 (496) T protein:vir:38 322 DNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLKTATEVVSEKSETYQTKNSHSQLIEQGIKEMIV 401 (496) T ss_pred cccccceeeccccCHHHHHHHHHHHHHHHHHhhCCChhhcCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 23345777777666677888888889999999999999998644332 1111 122333445555555 Q ss_pred HHHHHHHhhcc-C--ccchhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHh-CCCCCCCCCCCeeeeccCcc Q lcl|Aclame:pro 305 AITSELGLKTL-N--DKDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVEL-GKQKSTDPNMDRYQSSLNYV 378 (406) Q Consensus 305 ~ie~~l~~~l~-~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~-g~~p~~~~~gd~~~~~~n~~ 378 (406) .|-...+.... . ..+.....+.|+ +..+..+.++.+.+++.+|+++.-.+++.+ |.+ ++...+-+ . T Consensus 402 ~il~~~~~~~~~~g~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~~~~GiiS~et~l~~~~~~~---d~ea~~el-----~ 473 (496) T protein:vir:38 402 SILEVGKFIEAYSGEVVELDTITVDFDDSIAQDEDTTINRYTNAKNQGMIPLKIALQRAWNIT---EAEADEWA-----E 473 (496) T ss_pred HHHHHHHHHHhhcCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHhcCCCC---hHHHHHHH-----H Confidence 54433322111 1 111222344442 445677888888999999999988887643 332 23222111 0 Q ss_pred chhhccccccccCcccCCCccCCCC Q lcl|Aclame:pro 379 FLDKKEEYQDKVGIKGKGGEVNAEE 403 (406) Q Consensus 379 ~~~~~~~~~~~~~~~~~gg~~~~~~ 403 (406) -+. .+.+.+......++-.++++ T Consensus 474 ri~--~E~~~~~~~~d~~~~~~~~e 496 (496) T protein:vir:38 474 MLA--KEKQAEMPNNDMNGIFGEEE 496 (496) T ss_pred HHH--HhhhccCccccccCCCCCCC Confidence 011 11111111222222222222 No 200 >protein:vir:3609 Length: 452 # NCBI annotation: ORF32 # Family: family:all:125 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112695;genbank:gi:13786563;genbank:GeneID:921063 Probab=97.81 E-value=1.7e-05 Score=46.70 Aligned_cols=377 Identities=11% Similarity=0.060 Sum_probs=165.4 Q ss_pred Ccc-----cccccCCCCcch----------------hhHHHhhcCCcc-------cccchhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MSF-----FQPLGTSKVSYD----------------DYISSVLAGDVS-------QKYLGVSALKNSDILTATSIIAGDI 52 (406) Q Consensus 1 M~~-----f~~~~~~~~~~~----------------~~~~~~~~~~~~-------~~~~~~~a~~~~~v~~~i~~ia~~i 52 (406) |.. |.-.+....+.. ..+..+..|... ....+..-+..+-....|+..+.-+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~r~~~~~~Yy~g~~~i~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l 80 (452) T protein:vir:36 1 MKYKPPKLMTFSKDEPITVEVVTKFMEKHKLEVARYEYLKNMYLGIMAIDDEPAKDSWKPDNRLAVNFTKYIVDTFTGYF 80 (452) T ss_pred CcccCceeEEcCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCccccccCccceeecchHHHHHHHHhhhh Confidence 322 211111111100 001111111100 0000000112223344455555555 Q ss_pred ccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEc Q lcl|Aclame:pro 53 ARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEET 132 (406) Q Consensus 53 a~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~ 132 (406) -.-|+.+...+.+ ....+..+++ ..........+....+.+|.+|.++..+. +|.+. +..++|..+.+.++ T Consensus 81 ~g~~~~~~~~d~~--~~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~~~~~v~~d~-~g~~~-i~~~~p~~~~~v~d 151 (452) T protein:vir:36 81 NGIPVKKSHSDKE--ILTKLQEFDN-----LNDMEDEESELAKMACIYGRAFEFLYQDE-DTQTN-VVYNSPENMFMVYD 151 (452) T ss_pred cccCceeecCChh--HHHHHHHHHh-----hcChhHHHHHHHHHHHhcCeEEEEEEecC-CCeeE-EEEEcccceEEEEc Confidence 5556554322211 1222333332 22345667778889999999999888874 46654 67788888888776 Q ss_pred cCc--ceEEE--EEeecCCe-EE-EEcceeeEeeccC------------C---------CCCccccCHHHHHHHHHHHHH Q lcl|Aclame:pro 133 DNH--EIVYT--FTDMLTAK-QV-KCFAHDVIHWKFF------------S---------HDTILGRSPLLSLGDEIDLQT 185 (406) Q Consensus 133 ~~g--~~~~~--~~~~~~g~-~~-~~~~~~vih~r~~------------~---------~~~~~G~s~~~~~~~~i~~~~ 185 (406) +.. .+.+. ++....+. .. .+.++.++++... + .+...|.|.++.+...++..+ T Consensus 152 ~~~~~~~~~~i~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~iPvv~~~n~~~g~sd~e~v~~liDa~d 231 (452) T protein:vir:36 152 DTVKQEPLFAVRYGVDEDKKLQGEVYTLLETIKISGENDEISFGEGTYNPYPDLPVVEFYFNEERMSIFESVISLVNAFN 231 (452) T ss_pred CCCCCceEEEEEEEEecCceEEEEEEecCeEEEEEEcCCceEEecceeccCCcccEEEecCCCCCCcchHHHHHHHHHHH Confidence 543 22221 11111111 11 2334444333210 0 012347777777777777666 Q ss_pred HHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeecc-----CCceeeeccCChhHHHHHHHH Q lcl|Aclame:pro 186 GGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFD-----STMEYTPLEIDTNVLQLITSN 260 (406) Q Consensus 186 ~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~-----~g~~~~~l~~~~~d~~~~e~~ 260 (406) .+.....+.+...+.|-.++. ....+++....++. .+++.++ .+.++..+........+.... T Consensus 232 ~~~s~~~~~~~~~~~p~~~~~-g~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 299 (452) T protein:vir:36 232 KAISEKANDVDYFSDQYLTFL-GAAVEEEDLKNIRS-----------NRVINYYADGEGKNVDVKFLEKPDSDSQTENLL 299 (452) T ss_pred HHHHHHHHHHHHhcCceeEee-cCCcCchhhhhhhh-----------cceEEecCCCCccCCcceeEeecCCHHHHHHHH Confidence 666655555656666755554 33344443333221 1122222 223344444444455556677 Q ss_pred HHHHHHHHHHhcCCHHHhcccccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhh- Q lcl|Aclame:pro 261 NFSTAQIAKALRVPSYKLGVNSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEF- 327 (406) Q Consensus 261 ~~~~~~Ia~~fgvpp~~lg~~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~- 327 (406) +...+.|+..-++|..-.+..++-|. .....+..+..++..+++.|...+... -...+...+.+.| T Consensus 300 ~~l~~~I~~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~-~~~~~~~~i~i~f~ 378 (452) T protein:vir:36 300 DRLTKLIFQTTMVANISDESFGSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLFCELSTNV-SNKDSWKDIEYTFT 378 (452) T ss_pred HHHHHHHHHHhCccccCcccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCccccccceEEeC Confidence 78888898888888543332221111 122334555566666666665544432 1111222233444 Q ss_pred -cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 328 -DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 328 -~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) .+..+..+.++.+.++ .|+++..-+.++++.-.-+....+++-.- . +..............|.++...+++. T Consensus 379 ~~~p~d~~~~a~~~~k~--~g~iS~et~~~~~~~~~d~~~E~~ri~~E-~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (452) T protein:vir:36 379 RNEPKDIKEQAETANIL--MGITSQETALSVISVIPDVQAEMEKIKKE-E----ASTAIFDKDKQPSEKGTDTVVSETNE 451 (452) T ss_pred CCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHH-H----HHHHHHHhhccCCCCcccccCccccC Confidence 3344566677777665 57899888888775432111111111000 0 00000000111111111111111111 No 201 >protein:vir:733 Length: 453 # NCBI annotation: minor structural protein 1 # Family: family:all:125 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108710;genbank:gi:13487832;genbank:GeneID:920851 Probab=97.71 E-value=2.6e-05 Score=45.71 Aligned_cols=382 Identities=9% Similarity=-0.005 Sum_probs=169.3 Q ss_pred Ccccccc----cCCCCcchhhH-----------------HHhhcCCcc----ccc---chhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MSFFQPL----GTSKVSYDDYI-----------------SSVLAGDVS----QKY---LGVSALKNSDILTATSIIAGDI 52 (406) Q Consensus 1 M~~f~~~----~~~~~~~~~~~-----------------~~~~~~~~~----~~~---~~~~a~~~~~v~~~i~~ia~~i 52 (406) |++...+ .....-..+.+ ..+..|... ... .+..-+..+-....|+..+.-+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~r~~~~~~yy~g~~~i~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l 80 (453) T protein:vir:73 1 MNLKPIKLMTYSRDEEITDKVVNDFMKKHQEEVERYEYLGNMYKGIMEISSQKAKDSWKPDNRLTNNFAKYIVDTFVGYF 80 (453) T ss_pred CccccceeeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcCCCCCccCccceeecchHHHHHHHhhhhh Confidence 6653211 00000000111 111111100 000 0000111222333444444444 Q ss_pred ccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEc Q lcl|Aclame:pro 53 ARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEET 132 (406) Q Consensus 53 a~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~ 132 (406) -.-|+.+. .+.+. ....+..++. ..........+..+.+.+|.+|.++..+. +|.+. +..++|..+.+.++ T Consensus 81 ~g~~~~~~-~~d~~-~~~~l~~~~~-----~n~~~~~~~~~~~~~~~~G~~~~~v~~d~-~~~~~-i~~~~p~~~~~v~d 151 (453) T protein:vir:73 81 NGIPIKKT-HDDKS-VLEAMQLFDN-----LNDMEDEESELAKIACVYGRAYELMYQNE-STESE-VIYCSPLNVFMVYD 151 (453) T ss_pred cccCceee-cCChH-HHHHHHHHHH-----hcChhHHHHHHHHHHHhcCeEEEEEEeCC-CCceE-EEEEcccceEEEEe Confidence 33454432 11111 1122222222 22444566778889999999999888874 46664 66788888887776 Q ss_pred cCc-c-eEEE--EEeecCCeE--EEEcceeeEeeccC------------C---------CCCccccCHHHHHHHHHHHHH Q lcl|Aclame:pro 133 DNH-E-IVYT--FTDMLTAKQ--VKCFAHDVIHWKFF------------S---------HDTILGRSPLLSLGDEIDLQT 185 (406) Q Consensus 133 ~~g-~-~~~~--~~~~~~g~~--~~~~~~~vih~r~~------------~---------~~~~~G~s~~~~~~~~i~~~~ 185 (406) +.. . ..+. +.....+.. ..+..+.+++++.. + .+...|.|.++.+...++..+ T Consensus 152 d~~~~~~~~~i~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~s~~~~v~~liDa~~ 231 (453) T protein:vir:73 152 DSIKQKPLFAVYYGFDEEGNLSGTVYTLLETISITGKAGEVKFGESTYNVYSDLPIVEYNFNEERQSIFEPVHSLINSYN 231 (453) T ss_pred CCCCceeEEEEEEEEecCceEEEEEEeCCeEEEEEecCCceEEccceeccCCceeEEEecCCCCCCcchhhHHHHHHHHH Confidence 543 2 1111 111222222 12344444443311 0 012357788887777777666 Q ss_pred HHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 186 GGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTA 265 (406) Q Consensus 186 ~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~ 265 (406) .+.....+.....+.|..+++. ....++....++..-.-...+...+.....+.+.+++-++....+..+....+...+ T Consensus 232 ~~~S~~~~~~~~~~~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~l~~ 310 (453) T protein:vir:73 232 KVTSEKANDVEYFSDQYLVFLG-AEVDEEDAKNIKDNRLINFFDKNSNGQGTNAAKVDVKFLDKPDSDVQTENLLNRLER 310 (453) T ss_pred HHHHHHHHHHHHhccceeeeec-CCCCchhhhcccccccccccccccccccccccCceeEEeeecCCHHHHHHHHHHHHH Confidence 6665555555555666655543 334444444443221111111122223334456666666555455556667777888 Q ss_pred HHHHHhcCCHHHhcccccch--h----------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhh--cccc Q lcl|Aclame:pro 266 QIAKALRVPSYKLGVNSPNQ--S----------VAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEF--DTRS 331 (406) Q Consensus 266 ~Ia~~fgvpp~~lg~~~~~~--n----------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~--~~~~ 331 (406) .|+..-++|..-....++-| . ..+..+..+...|.-+++.|...+...- ...+...+.+.| .... T Consensus 311 ~I~~~s~~p~~~~~~~gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~-~~~~~~~i~v~f~~~~p~ 389 (453) T protein:vir:73 311 SIFQFTMAANISDENFGNSSGVALAYKLQAMSNLALSFQRKFQSALNRRYSLWSSLSTNAS-NKDAWKDIEYTFTRNEPK 389 (453) T ss_pred HHHHHhCCcccCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CccccccceEEeCCCCCC Confidence 88888888753332211111 1 1233345555566666665554443221 111222333444 2344 Q ss_pred hhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 332 VTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 332 ~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) +..+.++.+.+++ |+++..-+.++++.-+ ++..+ ..-+....+.+.... .++.-...+.++. T Consensus 390 ~~~~~a~~~~k~~--giis~et~~~~~~~~~--d~~~E-------~~ri~~E~~~~~~~~--~~~~~~~~~~~~~ 451 (453) T protein:vir:73 390 DIKEQAETANILK--GITSEETALSVISVIP--DVQAE-------MEKIKKKKLLQLSLT--RTSNLVRMKQMRG 451 (453) T ss_pred CHHHHHHHHHHHh--ccCcHHHHHHhCCCCC--CHHHH-------HHHHHHHHHHHHHHH--HhccCCcchhhhc Confidence 5667777777775 7888877777775522 11111 000111111011111 1111111111111 No 202 >protein:vir:4782 Length: 522 # NCBI annotation: putative minor capsid protein 1 # Family: family:all:898 # MgeID: mge:104 # MgeName: MM1 # Cross-refs: genbank:acc:NP_150162;swissprot:trembl:q94m49;genbank:gi:26553451;uniprot:Q94M49;genbank:GeneID:955983 Probab=97.70 E-value=2.7e-05 Score=45.62 Aligned_cols=384 Identities=12% Similarity=0.033 Sum_probs=172.2 Q ss_pred CcccccccC-----------CC---------C--cch--h---hHHHhhcCCccc--c------cchhhhhccHHHHHHH Q lcl|Aclame:pro 1 MSFFQPLGT-----------SK---------V--SYD--D---YISSVLAGDVSQ--K------YLGVSALKNSDILTAT 45 (406) Q Consensus 1 M~~f~~~~~-----------~~---------~--~~~--~---~~~~~~~~~~~~--~------~~~~~a~~~~~v~~~i 45 (406) ||+|.+.+. +. . +.. . .+..+..+.+.. + ......+.......++ T Consensus 1 m~~~~~~k~~~~k~~~~~~~~~~~~i~~~~~i~~~~~~~~~i~~~~~~y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (522) T protein:vir:47 1 MSLFQKVKDFFSRGRYYMQTSNLNSILEHPKIAVTQEEYDRIKRNLVYYQSKWDDVQYKNTDGDIKSRPMNHLPIARTAS 80 (522) T ss_pred CchHHHHHHHHHHHHHHhhcccchhccccCCCCCCHHHHHHHHHHHHHhcCCcccccccccCcchhcccceecchHHHHH Confidence 998743210 00 0 000 0 112222221110 0 0001112222223344 Q ss_pred HHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCe Q lcl|Aclame:pro 46 SIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPS 125 (406) Q Consensus 46 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~ 125 (406) +.+|+-+..=|..+. .+. ......+..+|. .-.....++..+...+..|.+++.+..+. |. ..+..+++. T Consensus 81 ~~~A~lv~~e~~~i~-v~d-~~~~~~l~~~l~-----~n~f~~~~~~~~e~a~a~G~~a~k~~~d~--~~-~~i~~v~ad 150 (522) T protein:vir:47 81 KKIASLVYNEQATIT-TKN-EILQKFLDDMLT-----NDRFNKNFERYLESCLALGGLAMRPYIDG--DK-VRVAFIQAP 150 (522) T ss_pred HHHhhhhcCCcceee-cCC-hHHHHHHHHHHh-----hcchHHHHHHHHHHhhccCCEEEEEEEcC--Cc-eEEEEEcCC Confidence 444444433232221 111 112223333332 22335556677777778888887777652 33 234445555 Q ss_pred eEEEEEccCcce------------------EEEEEee---------------------------------cCCeEEEEc- Q lcl|Aclame:pro 126 ETTVEETDNHEI------------------VYTFTDM---------------------------------LTAKQVKCF- 153 (406) Q Consensus 126 ~~~~~~~~~g~~------------------~~~~~~~---------------------------------~~g~~~~~~- 153 (406) .+.+...+.+.+ .|..... ..|..+.+. T Consensus 151 ~~~P~~~~~~~~~e~a~~~~~~~~~~~~~~~yt~lE~he~~~~~~~~~~~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~ 230 (522) T protein:vir:47 151 VFFPLESNTQDVSSAAILTKTIKSEGRKNVYYTLVEFHEWVTADGQETGSTNDKKYYRITNELYRSDVNDVLGQRVNLSE 230 (522) T ss_pred ceEEEEEcCCceEEEEEEEEEEeecccceeEEEEEEEeeecccccccccccccCCceEEEEEEeecCCCcccCccccccc Confidence 555432221111 1110000 001111000 Q ss_pred --------c---------eeeEeeccCC-----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceE----Eee Q lcl|Aclame:pro 154 --------A---------HDVIHWKFFS-----HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGIL----TMK 207 (406) Q Consensus 154 --------~---------~~vih~r~~~-----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~----~~~ 207 (406) + --..||+.+- ...++|+|...-+...++..+..-.....-++.|...-.+ +.. T Consensus 231 ~~e~~~l~~~~~~~~~~~Plf~y~~~~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g~~~i~v~~~~l~~ 310 (522) T protein:vir:47 231 LDKYKNLEPVTVFENLSRPLFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINRSYDEFMWEVRMGQRRVIVPEHLTQR 310 (522) T ss_pred cccccCCCCceEeCCCCcceEEEecCCcccccccCCCcCCchhhhhHHHHHHHHHHHHHHHHHHHhccceeecchHHhcc Confidence 0 0123555321 1246899999999999988887777666667766543211 221 Q ss_pred cCCC--CHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccch Q lcl|Aclame:pro 208 GAQL--SGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQ 285 (406) Q Consensus 208 ~~~~--~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~ 285 (406) .... .+......-+.-+..|.+-+. -.+++-+++.++....+-++....+...+.|+...|+++..+|..+++. T Consensus 311 ~~~~~~g~~~~~~~fd~~~~~f~~~~~----~~~~~~~i~~~~~~ir~e~~~~~~~~~l~~i~~~~gls~~tf~~~~~~~ 386 (522) T protein:vir:47 311 QYQRPDGTIDFRPRFDVEQNVYMQIGG----SSMDAGGITDLTSPIRANDYILAISEGLKLFEMQIGVSSGMFTFDGQGM 386 (522) T ss_pred CCCCCCcccccccccCcccceEeecCC----CCCCCCcceeeccccChHHHHHHHHHHHHHHHHHhCCCccccCcccccc Confidence 1111 100000000000111211110 0124445777887778889999999999999999999999998654321 Q ss_pred -hHH-------------HHHHHHHHHHHHHHHHHHHHHHHhh-ccC--ccchhhhhhhhc--ccchhHHHHHHHHHHHhC Q lcl|Aclame:pro 286 -SVA-------------QLMEDYVTNDLPFYFDAITSELGLK-TLN--DKDRRLYHIEFD--TRSVTGRNVDEIVKLVNN 346 (406) Q Consensus 286 -n~~-------------~~~~~~~~~~i~P~~~~ie~~l~~~-l~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 346 (406) +.. ...+..++.+|.-++..|.+..+.. ++. ........+.|+ +..|.++.++...+++.+ T Consensus 387 kTAtEi~s~~~~~~~t~~~~~~~~~~al~~lv~~i~~l~~~~~~~~~~~~~~~~i~v~f~D~i~~D~~~~~~~~~~~v~a 466 (522) T protein:vir:47 387 KTATEIVSENSDTYQMRSSIVALVEQSIKELCVSMCELGKAVGVYSGEIPELDDISVNLDDGVFTDRHAELDYWAKMVAA 466 (522) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceeEEEcCCCCCCCHHHHHHHHHHHHhc Confidence 111 1234555566666666665444321 111 112223445554 456778888999999999 Q ss_pred CCcCHHHHHHHhCCCCCCCCCCCeeeeccC--ccchhh--ccccccccCcccCCCccCC Q lcl|Aclame:pro 347 QILTPNQGLVELGKQKSTDPNMDRYQSSLN--YVFLDK--KEEYQDKVGIKGKGGEVNA 401 (406) Q Consensus 347 g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n--~~~~~~--~~~~~~~~~~~~~gg~~~~ 401 (406) |+|++-+++..+ +.++++...+-+.... ..+... .+....+..+..+ ||+.+ T Consensus 467 G~~s~e~~i~~~--~g~~eeea~~el~ri~~E~~~~~~~~~~~~~~~~~~~~~-~d~~~ 522 (522) T protein:vir:47 467 GFSTKKRAIGKT--LNISGVEAEKELNAINSELLPMNDAELAIYGMHDQNEEK-ADDKG 522 (522) T ss_pred CCCCHHHHHHhc--CCCChHHHHHHHHHHHHhhccCCCCCCCCCCCCCccccc-CCCCC Confidence 999999987653 2333333321111000 000000 0000011111111 11111 No 203 >protein:vir:97376 Length: 320 # NCBI annotation: putative portal protein # Family: family:all:11744 # MgeID: mge:1675 # MgeName: Q54 # Cross-refs: genbank:acc:YP_762589;genbank:gi:115304290;genbank:GeneID:5130579 Probab=97.62 E-value=3.1e-06 Score=50.81 Aligned_cols=311 Identities=11% Similarity=0.071 Sum_probs=150.8 Q ss_pred CcccccccCCCCcchh---hHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchHHHHhh Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDD---YISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLN 77 (406) Q Consensus 1 M~~f~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~ 77 (406) ||+|+.++...-++.- .+..+. +..++...-.+-+.+-+-+|..||.- +-.|+... ....||. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~ 66 (320) T protein:vir:97 1 MGIFNFKKRETLTPELKESIIRQVT-------IEDESPFTGTTDFNVRNEVAESIATY-LGAYKTSA------KRLSLLT 66 (320) T ss_pred CCccccccccccChhHHhhhhheee-------eccCCCcccccccchhhHHHHHHHHH-hhhhcccc------ceeeeee Confidence 9999877654433221 111111 00111111111122233344444421 01121111 1122343 Q ss_pred hhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcceEEEEEeecCC-eEEEEccee Q lcl|Aclame:pro 78 VKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTA-KQVKCFAHD 156 (406) Q Consensus 78 ~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~~~~~~~~~~g-~~~~~~~~~ 156 (406) .+| .|++.++.+.+..-..|+|..+.. |+++. +.-.++.. ..++.+....+.+. .+.++|-.| T Consensus 67 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~---~~~~~~~~~D~FN~~V~mtvpfyD 130 (320) T protein:vir:97 67 NNP-------SFLRRLVKHALHNKTTYVYKSPTY--GWLIT----DSMTIEGL---RARLTFTLPDPFNSAVTMTVPFYD 130 (320) T ss_pred CCH-------HHHHHHHHHhhcccceEEeeCCcc--ceeee----cceeeeee---eeeEEEecCcccceeEEEEeeeec Confidence 333 689999999998888888765432 32221 11111111 11222222211111 122222222 Q ss_pred eEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCC-HHHHHHHHHHHHHHhcccc-cCc Q lcl|Aclame:pro 157 VIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLS-GDARQRARQEFEKMREGSV-GGS 234 (406) Q Consensus 157 vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~g~~-~~~ 234 (406) +=. -.+.++|..+-+. ...++ .+.....+-+.|.+..+..+..+-+.. ++-.++.+.++.++..-.+ -.+ T Consensus 131 ~~I----Ldnpl~gv~tqe~-gkM~g---~a~~~v~kkL~~~~~IKafi~Tdid~GLee~kD~~~~kIk~mq~~A~~~nG 202 (320) T protein:vir:97 131 VGI----IDSPLVEVDTEEA-NKMLE---AAYSAVMKKLHNTGAIKAFISSDIDVGLEKMKEESDSKIKAMLATAELLSG 202 (320) T ss_pred hhh----hhhhhcccChHHh-hHHHH---HHhhhhhhhccccceeEEEEecccchhHHHHHHHHHHHHHHHHHHHHHhcC Confidence 211 1346677776532 22222 223334445666666666666554433 5566777777777764332 345 Q ss_pred eeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHHHH---HHHHH Q lcl|Aclame:pro 235 PLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFDAI---TSELG 311 (406) Q Consensus 235 ~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~~i---e~~l~ 311 (406) ..+++.|-+++++.....-.. ..-....+...+.-|+||..+|-+++ .+.+..+|+...+.|+++|+ |-.|. T Consensus 203 ~T~i~~~dDI~Qi~pDYS~sn-~~D~~l~~t~alS~y~m~~~IL~GsA----te~~~Iaf~~~~V~PLL~Q~~~~Ek~Lv 277 (320) T protein:vir:97 203 YTYIQRGDDVTQMMPDYTTSN-VTDFAAMRTFAASQLSVSDKILDGSA----TDGEKVAVMFRFVEPILEQFREYEPSLI 277 (320) T ss_pred cccccCCcceeeecccccccc-hhHHHHHHHHHHhhcCCchhhccccC----CcceeeehhhHhHHHHHHHhhhcCccee Confidence 778899999999876554332 22234556677889999999994433 46788899999999999997 44444 Q ss_pred hhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccC Q lcl|Aclame:pro 312 LKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVG 391 (406) Q Consensus 312 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~ 391 (406) .++ .+ .+.+-|..- +|-+..|.+ + +||.+- .. T Consensus 278 y~m---~~--E~FVs~mtT---------------GG~l~S~~~---------~-~~~~~~------------------~~ 309 (320) T protein:vir:97 278 YAM---RD--EFFVSFMTT---------------GGMLNSNRV---------D-GWGKEK------------------AP 309 (320) T ss_pred eee---cc--ceeeeeeec---------------Cceeecccc---------c-cccccc------------------CC Confidence 333 11 112222111 555555532 1 333211 12 Q ss_pred cccCCCccCCC Q lcl|Aclame:pro 392 IKGKGGEVNAE 402 (406) Q Consensus 392 ~~~~gg~~~~~ 402 (406) +..+|||..+- T Consensus 310 ~~~~~~~~~~~ 320 (320) T protein:vir:97 310 NESKGGDVGDV 320 (320) T ss_pred ccccCCcccCC Confidence 22333333222 No 204 >protein:vir:2732 Length: 501 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:58 # MgeName: O1205 # Cross-refs: genbank:acc:NP_695105;genbank:gi:23455874;genbank:GeneID:955614 Probab=97.61 E-value=3.7e-05 Score=44.86 Aligned_cols=397 Identities=12% Similarity=0.071 Sum_probs=175.9 Q ss_pred CcccccccC-------CCCcchhhHHHhhcCCcccc-----cc----hhhhhccHHHHHHHHHHHHhhccceeEEEecCC Q lcl|Aclame:pro 1 MSFFQPLGT-------SKVSYDDYISSVLAGDVSQK-----YL----GVSALKNSDILTATSIIAGDIARFPLVKKDVNG 64 (406) Q Consensus 1 M~~f~~~~~-------~~~~~~~~~~~~~~~~~~~~-----~~----~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 64 (406) +..++.... ...+.-..+..+..|..... .. +..-+..+-..-+|+..+.-+-.-|+.+...+. T Consensus 38 ~~~~~~l~~~i~~~~~~~~~r~~~l~~yY~g~~~~i~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~g~p~~~~~~d~ 117 (501) T protein:vir:27 38 VNNWELLKNFINHHKLRQAPRIQELLDYARGENHDVLQFGRRKDREMADKRAVHNYGRMISKFKTGYLAGNPIRVEYDDN 117 (501) T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccCccCccccccceeccchHHHHHHHHhhhhcccCeeEecCCc Confidence 222111110 00011111222222211100 00 011122333445566666666666766543322 Q ss_pred cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccC--cceEEE-- Q lcl|Aclame:pro 65 DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN--HEIVYT-- 140 (406) Q Consensus 65 ~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~--g~~~~~-- 140 (406) .. ...+...|. +-...-........+..+.+.+|.+|.++.++. +|.+. +..++|..+.+.+++. +.+.+. T Consensus 118 ~~--~~~~~~~l~-~~~~~n~~~~~~~~~~~~~~~~G~a~~~vy~de-d~~~~-i~~~~p~~~~~v~d~~~~~~~~~~ir 192 (501) T protein:vir:27 118 DN--NSQNDDTIK-RIGRINDIDSHNRTLIRDLSQTGRAYEVIYRNE-YDETR-IKRLNPLETFVIYDNSLEDNSIAAVR 192 (501) T ss_pred cc--hHHHHHHHH-HHHHhcChhHHHHHHHHHHhhCCeEEEEEEeCC-CCceE-EEEEccceeEEEecCCCCCceEEEEE Confidence 21 122223232 222223455788889999999999999998874 46553 6778898888877654 222221 Q ss_pred EEe--ec-CCe-E-EEEcceeeEeecc-----------CC---------CCCccccCHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 141 FTD--ML-TAK-Q-VKCFAHDVIHWKF-----------FS---------HDTILGRSPLLSLGDEIDLQTGGINTLIKFF 195 (406) Q Consensus 141 ~~~--~~-~g~-~-~~~~~~~vih~r~-----------~~---------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~ 195 (406) ++. .. ++. . ..+.++.+.++.. ++ .+...|.|.++.+...++..+.+.....+.+ T Consensus 193 ~~~~~~~~~~~~~~~vyt~~~v~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~d~~~S~~~~~~ 272 (501) T protein:vir:27 193 YYNRGTLQNAKDVVEIYTNEHIYTLDASDDFNEISVTTHAFGTVPITEFLNNVDGIGDYETELYLIDLYDSAESDTANHM 272 (501) T ss_pred EEEeeecCCcEEEEEEEeCCeEEEEEeCCceeeccccccCCCcccEEEecCCCCCCCchhhhHHHHHHHHHHHHHHHHHH Confidence 111 11 111 1 1223333332221 00 1223588888888888887777776666666 Q ss_pred hcCCCcceEEeecCCC-CHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCC Q lcl|Aclame:pro 196 KDGFSSGILTMKGAQL-SGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVP 274 (406) Q Consensus 196 ~ng~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvp 274 (406) .....|-.++...... .++....++.. ....-...+.......+.+++-++....+..+....+...+.|+..-++| T Consensus 273 ~~~~~~~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p 350 (501) T protein:vir:27 273 SDMADAILAIYGDLALPKGMQASDMKRT--RLMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAYKTRLNRDIHIFTNIP 350 (501) T ss_pred HHhcCceeeeecCccCCcccchhhhhhc--CceeecccccccCCCCCcceeeeeccCCHHHHHHHHHHHHHHHHHHhCCc Confidence 6656665555432221 22222222211 00000111112224456667666665555566677788888899999998 Q ss_pred HHHhcc-cccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ccchhhhhhhhc--ccchhHHHHH Q lcl|Aclame:pro 275 SYKLGV-NSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLN-DKDRRLYHIEFD--TRSVTGRNVD 338 (406) Q Consensus 275 p~~lg~-~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~-~~~~~~~~~~~~--~~~~~~~~~~ 338 (406) ....+. .++-|. .....+..+...|.-+++.|...++..--. ..+...+.+.|. +..+..+.++ T Consensus 351 ~~~~~~~~~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~v~f~~~~p~n~~e~ad 430 (501) T protein:vir:27 351 DMSDTNFSGNTSGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFKDFDESLLKITFTPNLPKSLNEQVS 430 (501) T ss_pred ccCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccceEEeCCCCCcCHHHHHH Confidence 755432 222111 122333555556666666655555432211 111222334442 3345666677 Q ss_pred HHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeecc-CccchhhccccccccC---cccCCCccCCCCCCC Q lcl|Aclame:pro 339 EIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSL-NYVFLDKKEEYQDKVG---IKGKGGEVNAEEDKS 406 (406) Q Consensus 339 ~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~-n~~~~~~~~~~~~~~~---~~~~gg~~~~~~~~~ 406 (406) .+.++ .|+++..-++++++.-.-+....+++---. ...+........+... ...+...+++++|.. T Consensus 431 ~~~kl--~g~iS~et~l~~l~~v~D~~~E~eri~~E~~e~~~~~~~~~~~~~~~~~~d~~~~~~~d~~e~~~ 500 (501) T protein:vir:27 431 ILTGL--GGQVSQETALSLSGLVESPNEELDKINKEVSEIDFKGYSNDFNEHVGKYTDEVKETHTDDFERAY 500 (501) T ss_pred HHHHH--hccCcHHHHHHhCCCCCCHHHHHHHHHHHHHhhhHhhhcCccccccccccCCCCCCccccccccC Confidence 77665 478888778777644221111111110000 0000000000000000 000001111111111 No 205 >protein:vir:98883 Length: 517 # NCBI annotation: portal # Family: family:all:898 # MgeID: mge:1568 # MgeName: BCJA1c # Cross-refs: genbank:acc:YP_164413;genbank:gi:56694903;genbank:GeneID:3197273 Probab=97.60 E-value=3.9e-05 Score=44.74 Aligned_cols=376 Identities=11% Similarity=0.052 Sum_probs=162.7 Q ss_pred CcccccccC-----------C---------CCcch----h---hHHHhhcCCccccc----ch----hhhhccHHHHHHH Q lcl|Aclame:pro 1 MSFFQPLGT-----------S---------KVSYD----D---YISSVLAGDVSQKY----LG----VSALKNSDILTAT 45 (406) Q Consensus 1 M~~f~~~~~-----------~---------~~~~~----~---~~~~~~~~~~~~~~----~~----~~a~~~~~v~~~i 45 (406) ||+|.+.+. . ..... . .+..+..|...... .. ...+..... T Consensus 1 m~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~w~~~Y~g~~~~~~~~~~~~~~~~~~~~sl~~~---- 76 (517) T protein:vir:98 1 MKVIQRIKNFFKRGGYALSGQTLKSINDHEKINIDPNELARIERNLRQYEGDYPQVEYINSQGKIQERDYMTLNLR---- 76 (517) T ss_pred CchHHHHHHHHHHHHHHhcccchhHhhcCCceecCHHHHHHHHHHHHHhcCCCcccccccccccccccceeecCcH---- Confidence 887744211 0 01111 1 12233333322100 00 001111111 Q ss_pred HHHHHhhccc------eeEEEecCCc-------ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC Q lcl|Aclame:pro 46 SIIAGDIARF------PLVKKDVNGD-------IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK 112 (406) Q Consensus 46 ~~ia~~ia~~------~~~~~~~~~~-------~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~ 112 (406) ..||+.+|.| .+.+-..+.. ......+..++. .......++..+.+.+..|.+++.+..|. T Consensus 77 ~~i~~~~A~Ll~~e~~~i~v~d~~~~~~~~~~~~~~~e~l~~i~~-----~n~f~~~~~~~~e~a~a~G~~a~k~~~d~- 150 (517) T protein:vir:98 77 KLSADVLSGLVFNEQCEVYVSDAKDEEKKDNSFKTAHEFIQHVFQ-----HNKFIKNLSDYLEPTFALGGLTVRPYVDN- 150 (517) T ss_pred HHHHHHhhhhhcCCcceEEecccccccccccchhHHHHHHHHHHH-----hccHHHHHHHHHHHHhhhCCEEEEEEEeC- Confidence 2344444443 2333221111 111122223332 22334555566777777899888777763 Q ss_pred CceeEEEeecCCeeEEEEEccCcce------------------EEEEEee----------------------c----CCe Q lcl|Aclame:pro 113 TNQALQFQFYRPSETTVEETDNHEI------------------VYTFTDM----------------------L----TAK 148 (406) Q Consensus 113 ~g~~~~l~~l~p~~~~~~~~~~g~~------------------~~~~~~~----------------------~----~g~ 148 (406) |.+ .+..++++.+.+...+.+++ .|..... . .|. T Consensus 151 -~~~-~I~~v~ad~~~Pl~~~~~~v~~~ai~~~~~~~~~~~~~~Yt~lE~H~~~~~~~~~~~y~I~n~ly~s~~~~~lG~ 228 (517) T protein:vir:98 151 -GEI-EFSWALANAFYPLRSNSNGISEGVMKSVTTKVIGNKTVYYTLLEFHEWEKTEEGESLYVITNELYKSDNEGEIGK 228 (517) T ss_pred -Cee-EEEEEcCCeeEEEEecCCCeEEEEEEEEEEEeecCCceEEEEEEEEecCceeccCCcEEEEEEEEecCCCccccc Confidence 333 35556666555433222221 1110000 0 011 Q ss_pred EEE-------Ecce--------e-eEeeccC---CC--CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEee Q lcl|Aclame:pro 149 QVK-------CFAH--------D-VIHWKFF---SH--DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMK 207 (406) Q Consensus 149 ~~~-------~~~~--------~-vih~r~~---~~--~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~ 207 (406) .+. +.+. . +.||+.+ +. ..++|+|...-+...++..+..-.....-++.|... .++ . T Consensus 229 ~v~L~~~~e~l~~~~~~~g~~~Plf~y~~~p~~N~~~~~splG~S~~~~a~~~~d~lD~~~s~~~~e~~~g~~~-i~v-p 306 (517) T protein:vir:98 229 RIPLEELYEGMQEKTYIQGLSRPLFNYLKPSGFNNINPHSPLGLGITDNSVSTLKKINDTYDQFWWEIKMGQRT-VFV-S 306 (517) T ss_pred cccccccccCCCcceeECCCCcceEEEecCCcccccccCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHhCCcc-eec-C Confidence 110 0000 1 2244432 11 246799999999999988877777666677765443 222 1 Q ss_pred cCCC----CHHHHHHHHHHH---HHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc Q lcl|Aclame:pro 208 GAQL----SGDARQRARQEF---EKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV 280 (406) Q Consensus 208 ~~~~----~~e~~~~~~~~~---~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~ 280 (406) ...+ +..... ....| ...|.+-. .-.++-.++.++....+-++.+..+...+.|+...|+++..+|. T Consensus 307 ~~~l~~~~~~~g~~-~~~~~d~~~~~y~~~~-----~~~~~~~i~~~~~~iR~e~~~~~~~~~L~~i~~~~Gls~~t~~~ 380 (517) T protein:vir:98 307 DVMLRTVPDESGMP-PPQVFDPDVNVYKSIR-----MGTDEEFVKDVTHDIRTEQYKEAINQALRTLEMELKLSVGTFSF 380 (517) T ss_pred hhhhccccCCCCcc-cCCCCCcccceeeecc-----CCCCCCceeeeccccchHHHHHHHHHHHHHHHHHhCCCcccccc Confidence 1111 000000 00000 00011000 00123346777777778889999999999999999999999997 Q ss_pred cccch-hHHHH--HHHHHHHHHHHHHHHHHHHHHh------------hccCcc--chhhhhhhhc--ccchhHHHHHHHH Q lcl|Aclame:pro 281 NSPNQ-SVAQL--MEDYVTNDLPFYFDAITSELGL------------KTLNDK--DRRLYHIEFD--TRSVTGRNVDEIV 341 (406) Q Consensus 281 ~~~~~-n~~~~--~~~~~~~~i~P~~~~ie~~l~~------------~l~~~~--~~~~~~~~~~--~~~~~~~~~~~~~ 341 (406) ...+. ++.+. ...-.-.++.-+.+.++..|.. .++... ......+.|+ +..|.++.++... T Consensus 381 ~~~~~kTATEi~s~~~~~~~t~~~~~~~~~~aL~~lv~~i~~l~~~~~~~~~~~~~~~~v~v~f~D~i~~D~~~~~~~~~ 460 (517) T protein:vir:98 381 DGRSMKTATEIVSENDLTYRTRNDHVYEVEQFIKGLVISVLELAKTYKLFGGEIPSAEHIGVDFDDGVFQDRSALLRFYG 460 (517) T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEcCCCCCCCHHHHHHHHH Confidence 54321 22111 1111112222233333333322 112111 1122344543 4567888889999 Q ss_pred HHHhCCCcCHHHHHHHh-CCCCCCCCCCCeeeeccCccchhhccccccccC-cccCCCccCCCCC Q lcl|Aclame:pro 342 KLVNNQILTPNQGLVEL-GKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVG-IKGKGGEVNAEED 404 (406) Q Consensus 342 ~~~~~g~~t~NE~R~~~-g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~-~~~~gg~~~~~~~ 404 (406) +++.+|+|++-+++.++ |+. ++.+.+-+... .......++.. .+...++-.++++ T Consensus 461 ~~v~aG~ms~~~~i~~~~g~~---eeeA~~e~~~i-----~~E~~~~~~~~~~~~~~~~~~gd~e 517 (517) T protein:vir:98 461 QAKTFGFIPTVEAIQRIFKVP---KKTAEQWLEEI-----RKDQIELDPVTISQRAQKRMFGDEE 517 (517) T ss_pred HHHhcCCCCHHHHHHHhCCCC---hHHHHHHHHHH-----HHhccccCCCCccccccCCCCCCCC Confidence 99999999999986654 654 34333222111 00000000000 0011111111111 No 206 >protein:vir:1634 Length: 409 # NCBI annotation: Structural protein # Family: family:all:524 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695055;genbank:gi:23455746;genbank:GeneID:955506 Probab=97.58 E-value=4.1e-05 Score=44.61 Aligned_cols=333 Identities=11% Similarity=0.045 Sum_probs=148.5 Q ss_pred Ccc--ccccc---CCCCcchhhHHHhhcCCccc-----ccchhhhhccHHHHHHHH---HHHHhhcc-ceeEEEecCCcc Q lcl|Aclame:pro 1 MSF--FQPLG---TSKVSYDDYISSVLAGDVSQ-----KYLGVSALKNSDILTATS---IIAGDIAR-FPLVKKDVNGDI 66 (406) Q Consensus 1 M~~--f~~~~---~~~~~~~~~~~~~~~~~~~~-----~~~~~~a~~~~~v~~~i~---~ia~~ia~-~~~~~~~~~~~~ 66 (406) |.. ...+. ....+.-..+..+..|.... .+.+. ++ +....+++ ++.+++|. +-+.=++ T Consensus 1 ~~~~~i~~L~~~~~~~~~r~~~~~~yY~g~~~~~~~~~~~p~~--~~-~~~~~v~nw~~~iVds~a~rl~~~Gf~----- 72 (409) T protein:vir:16 1 MTEKGIGYLRFKLSVHKRRAEMRYEQYAMKHVDRFKGITIPQA--LS-QQYRSILGWCAKGVDSLADRLVFREFE----- 72 (409) T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHhccCchhhcchhhhHH--HH-HHHhhhcChhHHHHHHhHhhccccccc----- Confidence 331 11110 00111111122222221111 11110 00 01112222 22222222 1121111 Q ss_pred cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcc-eE--EEEEe Q lcl|Aclame:pro 67 IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE-IV--YTFTD 143 (406) Q Consensus 67 ~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~-~~--~~~~~ 143 (406) ..+..+..++. -| ........+..+.+++|.+|+.+..+ .+|.| .+.+++|..+...++...+ +. +.+.. T Consensus 73 ~~d~~l~~i~~--~N---~ld~~~~~~~~~al~yG~sf~~v~~~-~dg~~-~i~~~sP~~~~~i~D~~~~~~~~a~~~~~ 145 (409) T protein:vir:16 73 NDDFTVNEIFE--EN---NPDIFFDSTVLSALIASCSFTYISKG-ENDAV-RLQVIEATNATGIIDPITGLLTEGYAVLE 145 (409) T ss_pred CcchHHHHHHH--hc---ChhHHHHHHHHHHHHhCceeEEEecC-CCCce-EEEEEcccceEEEeecccccceeeeEEEE Confidence 11223444432 22 23445567788889999999988876 44665 5778888888777654322 11 11111 Q ss_pred -ecCCeE---EEEccee----------------------eEeeccCCC-CCccccCH----HHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 144 -MLTAKQ---VKCFAHD----------------------VIHWKFFSH-DTILGRSP----LLSLGDEIDLQTGGINTLI 192 (406) Q Consensus 144 -~~~g~~---~~~~~~~----------------------vih~r~~~~-~~~~G~s~----~~~~~~~i~~~~~~~~~~~ 192 (406) ...+.. ..+.++. |++|.+.+. ..++|.|- +..+.+.+.....-..... T Consensus 146 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~~~~~~G~seI~~~v~~l~da~~r~~~~~~~~~ 225 (409) T protein:vir:16 146 RDENNNVVLEAHFLPDRTDYYYRDSRNNISIANPTGNPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAKRTLERADVTA 225 (409) T ss_pred ecCCCceEEEEEEecCcEEEEEecCccccceecCCCCcceEEecccccccccCCccccchhHHHHHHHHHHHHHHHHHHH Confidence 111111 0111222 444444322 34678774 4455555555554444555 Q ss_pred HHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHhcccccCceeecc-----CCceeeeccCChhHHHHHHHHHHHHHH Q lcl|Aclame:pro 193 KFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMREGSVGGSPLVFD-----STMEYTPLEIDTNVLQLITSNNFSTAQ 266 (406) Q Consensus 193 ~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~-----~g~~~~~l~~~~~d~~~~e~~~~~~~~ 266 (406) .++.+ |..++ -.+.+. +..+.++.... +++.++ .+.++.++....-+ .|++..+..+.. T Consensus 226 e~~a~---pqr~i~G~d~d~--~~~~~~~~~~~---------~i~~~~~d~~g~~~~v~q~~~~~l~-~~~~~l~~~~~~ 290 (409) T protein:vir:16 226 EFYSF---PQKYVTGLSDDA--EPMETWKATVS---------SMLQFTKDEDGDKPTLGQFTQPSMS-PFTEQLRTAAAG 290 (409) T ss_pred HHhcC---hhheeEecCCCC--Cccchhhhhhh---------HhhccCCCCCCCCceEEecCCCChh-HHHHHHHHHHHH Confidence 55543 44333 332222 22223322222 233332 34567666554322 478999999999 Q ss_pred HHHHhcCCHHHhcccccc-hhHH---HHHHHHHHHHHHHHHHHHHHHHH----hhcc--C-----ccchhhhhhhhc-c- Q lcl|Aclame:pro 267 IAKALRVPSYKLGVNSPN-QSVA---QLMEDYVTNDLPFYFDAITSELG----LKTL--N-----DKDRRLYHIEFD-T- 329 (406) Q Consensus 267 Ia~~fgvpp~~lg~~~~~-~n~~---~~~~~~~~~~i~P~~~~ie~~l~----~~l~--~-----~~~~~~~~~~~~-~- 329 (406) +|..=++|++.||....+ ++.+ .+...+... ..-..+.+.+.+. ..+. . ..+.....+.+. + T Consensus 291 ~a~~s~lP~~~lg~~~~NpsSa~Ai~a~~~~L~~k-a~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~~v~W~~~~ 369 (409) T protein:vir:16 291 FAGETGLTLDDLGFVSDNPSSVEAIKASHENLRLA-GRKAQRSLGAGLLNVAYLAACLRDDVPYLREQFSKTKPKWEPLF 369 (409) T ss_pred HhhhcCCCHHHcccccCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCccchhhccceEEecCCC Confidence 999999999999976543 2221 111111111 1111111221111 1110 0 011111222221 1 Q ss_pred cc---hhHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 330 RS---VTGRNVDEIVKLVNNQ--ILTPNQGLVELGKQKST 364 (406) Q Consensus 330 ~~---~~~~~~~~~~~~~~~g--~~t~NE~R~~~g~~p~~ 364 (406) .. .....++++.++++.| +...+-+++++|+..-+ T Consensus 370 ~~~~~s~a~~aDa~~Kl~~a~~~~~~~~v~~~~~g~~~~d 409 (409) T protein:vir:16 370 EADASMLSLIGDGAIKLNQAIPEFINKDTIRDLTGIKGAE 409 (409) T ss_pred CcchhhHHHHHHHHHHHHhhcccccchhHHHHhccCCCCC Confidence 11 2456678888999986 34457789999998753 No 207 >protein:vir:8184 Length: 474 # NCBI annotation: gp4 # Family: family:all:524 # MgeID: mge:153 # MgeName: Che9d # Cross-refs: genbank:acc:NP_817977;genbank:gi:29566411;genbank:GeneID:2700965 Probab=97.54 E-value=4.9e-05 Score=44.22 Aligned_cols=381 Identities=9% Similarity=0.011 Sum_probs=152.1 Q ss_pred CcccccccC---CCCcchhhHHHhhcCCcccccchhh---hhc-----cHHHHHHHHHHHHhhccceeEEEecCCccccc Q lcl|Aclame:pro 1 MSFFQPLGT---SKVSYDDYISSVLAGDVSQKYLGVS---ALK-----NSDILTATSIIAGDIARFPLVKKDVNGDIIHD 69 (406) Q Consensus 1 M~~f~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---a~~-----~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 69 (406) +.+...+.. ...+.-..+..+..|.......+.. .++ .....-||+.+++.+.--.| +..+..... T Consensus 17 ~~~~~~L~~~~~~~~~~~~~~~~Yy~G~~~~~~~~~~~p~~~r~~~~v~nw~~~~Vd~~a~rl~~~Gf---~~~d~~~~~ 93 (474) T protein:vir:81 17 NALINGLLAQIENLRWKNLLRTSYYENKRTIQYVGTLIPPQYFNLGLVLGWTGKAVDALARRCNLEGF---VWPDGDLDS 93 (474) T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhccCCChhhccccccHHHHHHHhhcChHHHHHHHHHhhhcccce---ECCCCCccc Confidence 111110000 0000001111222222111001000 011 01112234444432222223 222222222 Q ss_pred chHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCcee-EEEeecCCeeEEEEEccCcce-EEE---EEee Q lcl|Aclame:pro 70 EDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQA-LQFQFYRPSETTVEETDNHEI-VYT---FTDM 144 (406) Q Consensus 70 ~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~-~~l~~l~p~~~~~~~~~~g~~-~~~---~~~~ 144 (406) ..+..++. -|.. ......+..+.+++|.+|+.+..+.. |.+ ..+.+++|..+...++...+. .+. +... T Consensus 94 ~~l~~iw~--~N~l---d~~~~~~~~~al~~G~sf~~V~~~~d-~~~~~~i~~~sp~~~~~~~D~~~~~~~~al~~~~~~ 167 (474) T protein:vir:81 94 LGGTEVVD--DNHL---LSEIDSAIVAAMQHGPAFLINTVGED-DEPEALIHVKDASEATGEWNRRRRGLNNLLSIIDKD 167 (474) T ss_pred hHHHHHHH--hcCh---hHHHHHHHHHHHhhCceeEEEecCCC-CCceeEEEEeccceEEEEEeCCCCcceeeeEEEEEc Confidence 33444432 2322 34556677888999999998887543 443 557888998888776644321 111 1111 Q ss_pred cCCeE---EEEccee-------------------------eEeeccCC-CCCccccCHH----HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 145 LTAKQ---VKCFAHD-------------------------VIHWKFFS-HDTILGRSPL----LSLGDEIDLQTGGINTL 191 (406) Q Consensus 145 ~~g~~---~~~~~~~-------------------------vih~r~~~-~~~~~G~s~~----~~~~~~i~~~~~~~~~~ 191 (406) .+|.. ..+.++. |++|.+++ ..+++|.|.+ ..+...+.....-.... T Consensus 168 ~~g~~~~~~ly~~~~~~~~~~~~~~~~w~~~~~~~~~gvPvV~~~n~~~~~~~~G~s~i~e~v~~l~da~~r~~~~~~~~ 247 (474) T protein:vir:81 168 KEGKVLSLALYLDNETVTAQRDKATLKWQVDRDEHVYGVPAQVLPYKPAPKRPFGQSRITKPMMGLQDAGVRELARREGH 247 (474) T ss_pred CCCcEEEEEEEeCCcEEEEEEcCccceeeeccCCCCCCcceEEecccccccCcCCccccchhHHHHHHHHHHHHHHHHHH Confidence 22211 1111222 34444332 2345677744 33333333333333333 Q ss_pred HHHHhcCCCcceEEe-ecC-CCCH---HHHHHHHHHHHHHhcc-cccCceeeccCCceeeeccCChhHHHHHHHHHHHHH Q lcl|Aclame:pro 192 IKFFKDGFSSGILTM-KGA-QLSG---DARQRARQEFEKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTA 265 (406) Q Consensus 192 ~~~~~ng~~~~~~~~-~~~-~~~~---e~~~~~~~~~~~~~~g-~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~ 265 (406) ..++. .|.-.+. ... ...+ +....++..+.....- .+.........+.++.++....- .-|++..+..+. T Consensus 248 ~e~~a---~pqr~i~G~~~~~~~d~d~~~~~~~~~~~~~i~~~~~d~d~~~~~~~~~~~~q~~~a~l-~~~~~~l~~~~~ 323 (474) T protein:vir:81 248 MDVFS---YPEFWLLGADESALKNADGTIKSVWEARLGRIKGLPDDADADIPQLARADVKQFPAASP-DAHWSDINGLAK 323 (474) T ss_pred HHHhc---chhheeecCChhhcccccccccchhhhhHHHHhcCCCcccccccccccccccccCCCCh-hHHHHHHHHHHH Confidence 44443 3443333 211 1111 1223444444444321 11111222334567777665432 237888899999 Q ss_pred HHHHHhcCCHHHhcccc--cchhHHHH---HHHHHHH---HHHHHHHHHHHHHHhhccCcc---------chhhhhhhh- Q lcl|Aclame:pro 266 QIAKALRVPSYKLGVNS--PNQSVAQL---MEDYVTN---DLPFYFDAITSELGLKTLNDK---------DRRLYHIEF- 327 (406) Q Consensus 266 ~Ia~~fgvpp~~lg~~~--~~~n~~~~---~~~~~~~---~i~P~~~~ie~~l~~~l~~~~---------~~~~~~~~~- 327 (406) .||..=++|++.||... +.++.+.. ...+... .-.-+-..+++.+-..+.-.. +.....+.+ T Consensus 324 ~~a~~t~iP~~~lG~~~~~np~SaeAi~a~~~~l~~kae~k~~~fg~~l~~~~rla~~i~~~~~~~~~~~~~~~~~v~W~ 403 (474) T protein:vir:81 324 LFAREASLPDTAVAISGLSNPTSAESYDASQYELIAEAEGAVDDFTPALRKAFIRALAMKNKVAIDEIPDEWKSIDAKWR 403 (474) T ss_pred HHHhhhCCCHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccchhhccceeEec Confidence 99999999999999642 22332221 1111111 111122222222221111100 001111122 Q ss_pred cc-cchhHHHHHHHHHHHhCCC--cCHHHHHHHhCCCCCCCC-CCCeeeeccCccchhhccccccccCcccCCCccCCCC Q lcl|Aclame:pro 328 DT-RSVTGRNVDEIVKLVNNQI--LTPNQGLVELGKQKSTDP-NMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEE 403 (406) Q Consensus 328 ~~-~~~~~~~~~~~~~~~~~g~--~t~NE~R~~~g~~p~~~~-~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~ 403 (406) +. .....+.++++.+++++|. .+..=+++++|+.+-+-. +-..........+++..... .+ ++ .. T Consensus 404 d~~~~s~a~~aDa~~Kl~~a~~~~~~~~~~~~~lg~t~~~i~~~~~~~~~~~~~~~~~~l~~~----~~--~~-----~~ 472 (474) T protein:vir:81 404 DPRYLSKSAQADAGMKQLAAVPWLAETEVGLELIGLTPQQARRAMADKRRVQGRGTLQALIDR----SN--NG-----AT 472 (474) T ss_pred CCCccCHHHHHHHHHHHHhcccCCCcHHHHHhhcCCCHHHHHHHHHHHHHHhHHHHHHHHHhc----CC--CC-----CC Confidence 11 2245677888899999874 334446788888764211 00000001111122211110 00 00 00 Q ss_pred CC Q lcl|Aclame:pro 404 DK 405 (406) Q Consensus 404 ~~ 405 (406) .| T Consensus 473 aq 474 (474) T protein:vir:81 473 AQ 474 (474) T ss_pred CC Confidence 11 No 208 >protein:vir:9871 Length: 429 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795633;genbank:gi:28876408;genbank:GeneID:1257942 Probab=97.47 E-value=6.1e-05 Score=43.70 Aligned_cols=367 Identities=11% Similarity=0.039 Sum_probs=165.9 Q ss_pred Cc------ccccccCCCCcchhhHHHhhcCCc-------ccccchhhhhccHHHHHHHHHHHHhhccceeEEEecCCccc Q lcl|Aclame:pro 1 MS------FFQPLGTSKVSYDDYISSVLAGDV-------SQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDII 67 (406) Q Consensus 1 M~------~f~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 67 (406) |. |.+....+ .+.-..+..+..|.. -.......-+.++-...+|+..+.-+-.-|+.+.. +.+. T Consensus 1 l~~~~l~~~i~~~~~~-~~r~~~l~~yy~g~~~il~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~~-~~~~- 77 (429) T protein:vir:98 1 MTKDLLSELIQKHRSF-NLSYSAYKQLYEGDHAILQQKQKEQYKPDNRLVVNFAKYIVDTFNGYFIGVPVQTSH-ENKQ- 77 (429) T ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHhccccccccccccccCCCcceeecchHHHHHHHHhhhhcccCceeec-CChH- Confidence 21 11111100 011111111111110 00000111123344556677777766666765432 2111 Q ss_pred ccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCc--ceEEE--EEe Q lcl|Aclame:pro 68 HDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNH--EIVYT--FTD 143 (406) Q Consensus 68 ~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g--~~~~~--~~~ 143 (406) ....+..++.. | ........+..+.+.+|.+|.++..+. +|.+. +..++|..+.+.+++.. .+.+. ++. T Consensus 78 ~~~~l~~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~-~g~~~-~~~~~p~~~~~v~dd~~~~~~~~~i~~~~ 150 (429) T protein:vir:98 78 VSNYLELLDGY--N---DQDDNNAELSKICSIYGHGYELVFNDE-NAEAG-ITYLTPLEAFIVYDDSIRQKPLFAVRYFY 150 (429) T ss_pred HHHHHHHHHhh--c---CHhHHHHHHHHHHhhcCeEEEEEEecC-CCcEE-EEEEcccceEEEEeCCCCCceEEEEEEEE Confidence 11223333321 2 344667888899999999999988874 46654 66788888887776543 22221 111 Q ss_pred ecCCeE-EEEc-cee-------------------------eEeeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 144 MLTAKQ-VKCF-AHD-------------------------VIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFK 196 (406) Q Consensus 144 ~~~g~~-~~~~-~~~-------------------------vih~r~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 196 (406) ..++.. ..+. .+. |++++ +...|.|-++.+...++..+.+.....+.+. T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~----n~~~g~sd~e~v~~liD~~d~~~s~~~~~~~ 226 (429) T protein:vir:98 151 NKGGVLEGSYSDASNITYFKDGEKGIEIGESEPHPFDGVPMIEYV----ENEERQSLLASVVTLINAFNKAISEKANDVE 226 (429) T ss_pred ecCceEEEEEEeCceEEEEEecCCceEecccccccCCccceEEec----CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH Confidence 111111 1111 111 22222 2335888888888888877776666666666 Q ss_pred cCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeecc----CCceeeeccCChhHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 197 DGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFD----STMEYTPLEIDTNVLQLITSNNFSTAQIAKALR 272 (406) Q Consensus 197 ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~----~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fg 272 (406) ..+.|-.+++. ...+++....++. .+++.++ .+.++..++.......+....+...+.|+..-+ T Consensus 227 ~~~~p~~~i~g-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~ 294 (429) T protein:vir:98 227 YFADAYLKILG-AELDDETLKSLRD-----------TRIINLKDTDAQQLTVEFLQKPDADATQEHLLDRLENLIFRTAM 294 (429) T ss_pred HhcCceeeeec-CCCCcchhhhHhh-----------CceeeccCCCCCCcceeEEeecCCHHHHHHHHHHHHHHHHHHhC Confidence 66667666553 2333333222211 1233332 223444454444444455667788888988888 Q ss_pred CCHHHhcccccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhh--cccchhHHHHH Q lcl|Aclame:pro 273 VPSYKLGVNSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEF--DTRSVTGRNVD 338 (406) Q Consensus 273 vpp~~lg~~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~~~ 338 (406) +|..-.+..++-|. .....+..+..++.-+++.+...++..-. ..+...+.+.| ....+..+.++ T Consensus 295 ~p~~~~~~~gn~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~-~~d~~~i~v~f~~~~p~~~~~~a~ 373 (429) T protein:vir:98 295 VANISDESFGTASGIALRYRLQAMDNLAKTKERKFMSGMNRRYKLIASYPTSKIG-PKDWIGIKYKFTRNLPANLLEESQ 373 (429) T ss_pred ccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-ccccccceEEeCCCCCcCHHHHHH Confidence 88543322221111 11222344444555555555444432211 11112233444 23345666677 Q ss_pred HHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCC Q lcl|Aclame:pro 339 EIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 339 ~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~ 405 (406) .+.++ .|+++..-+.++++.-+ ++..+ +.-+...........+..-+++++++..+ T Consensus 374 ~~~kl--~g~is~et~~~~l~~v~--d~~~E-------~~ri~~E~~~~~~~~~~~~~~~~~~~~~~ 429 (429) T protein:vir:98 374 IAGNL--AGIVSEETQVGVLSIVE--NPQKE-------IERKNSDKSTLISRQAGGLNGQNTTTILE 429 (429) T ss_pred HHHHH--hccCchHHHHHhCCCCC--CHHHH-------HHHHHHHHHHHHHHHHhhhcCCCCCCCCC Confidence 77765 57899877888875432 11110 00011000000011111112222222222 No 209 >protein:vir:96179 Length: 468 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1602 # MgeName: 37 # Cross-refs: genbank:acc:YP_240075;genbank:gi:66395736;genbank:GeneID:5133166 Probab=97.33 E-value=9.3e-05 Score=42.69 Aligned_cols=369 Identities=11% Similarity=0.015 Sum_probs=158.5 Q ss_pred CcccccccCCCC-----------------cchhhHHHhhcCCccc--------------ccchhhhhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MSFFQPLGTSKV-----------------SYDDYISSVLAGDVSQ--------------KYLGVSALKNSDILTATSIIA 49 (406) Q Consensus 1 M~~f~~~~~~~~-----------------~~~~~~~~~~~~~~~~--------------~~~~~~a~~~~~v~~~i~~ia 49 (406) +.-|+...-... ..-..+..+..|.... ...+..-+.++-....++..+ T Consensus 14 ~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~yY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Iv~~~~ 93 (468) T protein:vir:96 14 ERVVEQIKPQYETQEEMILRLITKHKENVEDITVGERYYNHQPDVLFNAPKRNVKGEIDPFKPDWRMYTNYHQNLVDQKV 93 (468) T ss_pred hheeecccccccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccchHHHHHHHHH Confidence 111111000000 0000011112221000 000111122333344555555 Q ss_pred HhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEE Q lcl|Aclame:pro 50 GDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTV 129 (406) Q Consensus 50 ~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~ 129 (406) .-+-.-|+.+.-.+ + .....+...+. | +..+....+..+.+.+|.+|.++..+. +|.+ .+..++|..+.+ T Consensus 94 ~~l~g~p~~~~~~d-~-~~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~v~~d~-~~~~-~i~~~~p~~~~~ 163 (468) T protein:vir:96 94 AYAVANPVTYGTED-E-KSLKTIQEVLN---H---KWDDKLVDILTAASNKGVEWIQPYVDE-QGEF-KTFRVPAEQAIP 163 (468) T ss_pred hhhccCCceeccCC-h-HHHHHHHHHHh---c---CHHHHHHHHHHHHhhcCeEEEEEEEcC-CCce-EEEEEcccceEE Confidence 55555565543222 1 11223333332 2 345666778899999999998888764 4554 477788888887 Q ss_pred EEccC--cceEEE--EEeecCCeEE-EEcceeeEeecc--------------------------CC---------CCCcc Q lcl|Aclame:pro 130 EETDN--HEIVYT--FTDMLTAKQV-KCFAHDVIHWKF--------------------------FS---------HDTIL 169 (406) Q Consensus 130 ~~~~~--g~~~~~--~~~~~~g~~~-~~~~~~vih~r~--------------------------~~---------~~~~~ 169 (406) .+++. +.+... ++........ .+.+..+.+++. ++ .+... T Consensus 164 v~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvv~~~n~~~ 243 (468) T protein:vir:96 164 IWTNKERDELKAFIRLYELDGGERVEYWTANDVTFYELKDGQLIPDYYQGEEHVQAHYYVGNKSMSWNRVPFIPFKNNPQ 243 (468) T ss_pred EEcCCCCCceEEEEEEEEecCceEEEEEeCCeEEEEEEcCCceeecccccccccccceeeccccccCCcccEEEecCCCC Confidence 76543 333211 1111111111 122333333221 00 01235 Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeecc--CCceeeec Q lcl|Aclame:pro 170 GRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFD--STMEYTPL 247 (406) Q Consensus 170 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~--~g~~~~~l 247 (406) |.|-++.+...++..+.+.....+.++..+.|-.++.... .. +.+.+...++ .++++.++ ++.+++.+ T Consensus 244 g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~-~~--~~~~~~~~~~-------~~~~i~~~~d~~~~~~~l 313 (468) T protein:vir:96 244 EVSDLFMYKTIIDAMDKRLSDTQNTFDEATELIYVLKGYE-GE--DLEEFMYNLK-------YYKAINVDGDGSGGVDTI 313 (468) T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCC-cc--ccchhhhhhh-------cCceEEecCCCCCcceEE Confidence 7887777777777776666655555666666655554322 11 1111111111 12334332 34445545 Q ss_pred cCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc-cccchh--H----------HHHHHHHHHHHHHHHHHHHHHHHHhhc Q lcl|Aclame:pro 248 EIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV-NSPNQS--V----------AQLMEDYVTNDLPFYFDAITSELGLKT 314 (406) Q Consensus 248 ~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n--~----------~~~~~~~~~~~i~P~~~~ie~~l~~~l 314 (406) +.......+....+...+.|+..-++|....+. .++-|. . ....+..+...|.-+++.|...+.. T Consensus 314 ~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~g~-- 391 (468) T protein:vir:96 314 QIDVPVQSAKEYLDMLRDYVIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYKL-- 391 (468) T ss_pred eecCChHHHHHHHHHHHHHHHHHhCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-- Confidence 544444555666777888888888888543321 111111 1 1222334444444444444333221 Q ss_pred cCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCccc Q lcl|Aclame:pro 315 LNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKG 394 (406) Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~ 394 (406) ..+...+.+.|.. .......+.+..+.+.|+++.-.++++++. ++++... +.-+.............. T Consensus 392 --~~d~~~i~i~f~~-~~p~d~~e~a~~~~~~g~iS~et~i~~l~~--v~D~~~E-------~~ri~~E~~~~~~~~~~~ 459 (468) T protein:vir:96 392 --SIKVQDVEITFNF-NVMVNELEQSQIGVNSQYLSKETVVTNHPW--VDDPVAE-------MERIDQEELALPSIEEGL 459 (468) T ss_pred --CcccceeeEEecC-CCCcCHHHHHHHHHhcCCCchHHHHHhCCC--CCCHHHH-------HHHHHHHHHHHHHHhhcc Confidence 1122223344421 122222333444567799998888887643 2111110 111111111111222233 Q ss_pred CCCccCCCC Q lcl|Aclame:pro 395 KGGEVNAEE 403 (406) Q Consensus 395 ~gg~~~~~~ 403 (406) +|+++++.. T Consensus 460 ~~~~~~~~~ 468 (468) T protein:vir:96 460 NGKENNEPT 468 (468) T ss_pred CCCCCCCCC Confidence 344433333 No 210 >protein:vir:78083 Length: 537 # NCBI annotation: gp3 # Family: family:all:125 # MgeID: mge:1844 # MgeName: P35 # Cross-refs: genbank:acc:YP_001468787;genbank:gi:157325368;genbank:GeneID:5601845 Probab=97.30 E-value=0.0001 Score=42.47 Aligned_cols=386 Identities=10% Similarity=-0.025 Sum_probs=167.5 Q ss_pred Cc---cccc-----ccCCCCcchhhHHHhhcCCc-------------ccc----cchhhhhccHHHHHHHHHHHHhhccc Q lcl|Aclame:pro 1 MS---FFQP-----LGTSKVSYDDYISSVLAGDV-------------SQK----YLGVSALKNSDILTATSIIAGDIARF 55 (406) Q Consensus 1 M~---~f~~-----~~~~~~~~~~~~~~~~~~~~-------------~~~----~~~~~a~~~~~v~~~i~~ia~~ia~~ 55 (406) |. ||.. ..++..+.-..+.....|.- ... ..+..-+.+.-..-.|+..+.-+-.- T Consensus 11 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~YY~g~h~Il~r~~~~~~~~~~~~~d~~~~nnki~~nf~k~Ivd~~~~yl~G~ 90 (537) T protein:vir:78 11 DQLGGLLNTEITTYMASNHIKWAHIGENYYNQENDIEKSRIFYMNDKGQLREDNYASNVKISHGFFTELVDQLAQYLLSN 90 (537) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccccccccccccccccccccccccchHHHHHHHHhhhhccc Confidence 11 1110 00000000000111111110 000 00001111222233455555566566 Q ss_pred eeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCc Q lcl|Aclame:pro 56 PLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNH 135 (406) Q Consensus 56 ~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g 135 (406) |+.+.-.+. ....+...|+.- +. .........+..++..+|.+|.++-.+.. |.+ .+..++|..+-+.+++.+ T Consensus 91 Pv~~~~~d~---~~~e~~~~l~~~-~~-~~~~~~~~el~~~~s~~G~ay~~~y~de~-~~~-~~~~i~p~~~~pv~d~~~ 163 (537) T protein:vir:78 91 GVEVKVKDE---DNTQLDEILQEY-FD-EDFQATIDTLVTNASKKGFEGIFARTTSE-GKL-KFQTVDGLTLIPVFDDYG 163 (537) T ss_pred CceeecCcc---hhHHHHHHHHHH-hh-ccHHHHHHHHHHHHhhcCeeEEEeeecCC-Cce-EEEEEccceeEEEEcCCC Confidence 776532221 112334444422 21 23345667788899999999998888744 554 467788888888887766 Q ss_pred ceEEEEE----ee-----cCCe----EEEEcceeeEeeccC--------------------------------------- Q lcl|Aclame:pro 136 EIVYTFT----DM-----LTAK----QVKCFAHDVIHWKFF--------------------------------------- 163 (406) Q Consensus 136 ~~~~~~~----~~-----~~g~----~~~~~~~~vih~r~~--------------------------------------- 163 (406) .....+. .. ..+. ...+.++.|.+++.. T Consensus 164 ~~~~~~~~y~~~~~~~~~~~~~~~~~~evyt~~~i~~y~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 243 (537) T protein:vir:78 164 VLKMIIRWYSEIRYSTKQQSTETIWHADVWNEEAVCYYIQDDEGVSTTYKLDEAYNPNPAPHVLAIEESTDADFEDTDGY 243 (537) T ss_pred CceeEEEEEeeeeccccccCcceEEEEEEEcCCcEEEEEecCCcccccccccccccccccceeeeccccccccccccccc Confidence 4321110 00 0100 112344444443210 Q ss_pred -----CC---------CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 164 -----SH---------DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG 229 (406) Q Consensus 164 -----~~---------~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g 229 (406) ++ +...|.|-++.+...|+..+.+.....+.+...+-|-.++....... ...++..++. T Consensus 244 ~~~~~~~g~iPvv~f~nn~~~~sd~e~v~~LiDayd~~~S~~an~~~~~~~~ilvi~g~~~~~---~~~~~~~l~~---- 316 (537) T protein:vir:78 244 QVLGRSYSKFPFQLLYNNKDGMSDVKRVKSIIDDYDVMNCFLSNNLQDFSEAIYVVKGFSGDS---TDKLRQNIKA---- 316 (537) T ss_pred cccccCCcceeEEEeccCccCCCchhhhHHHHHHHHHHHHhhhhHHHHhcCceeeeecCCCcc---chhHHHHHhh---- Confidence 00 12247788888888888777777666666666555555544322211 1222222221 Q ss_pred cccCceeec-cCCceeeeccCChhHHHHHHHHHHHHHHHHHHh---cCCHHHhcccccch----------hHHHHHHHHH Q lcl|Aclame:pro 230 SVGGSPLVF-DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKAL---RVPSYKLGVNSPNQ----------SVAQLMEDYV 295 (406) Q Consensus 230 ~~~~~~~vl-~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~f---gvpp~~lg~~~~~~----------n~~~~~~~~~ 295 (406) .+++.+ +.+.++.-+.....+.......+...+.|...- ..+....|.. ++. ......+.++ T Consensus 317 ---~~~i~v~~d~~~v~~l~~~~~~~~~e~~ld~L~~~I~~~s~~~~~~~~~~gn~-SGvAlk~~~~~l~~ka~~ke~~f 392 (537) T protein:vir:78 317 ---KKMIGVNGDNAGMEIQTVSIPYEARKAKMDIDVENIYRSGMGFNSTAVGDGNV-TNVVIKSRYTLLAMKARKMETSL 392 (537) T ss_pred ---cCceeecCCCCceeEEEecCCHHHHHHHHHHHHHHHHHhcCCCCCccccccCC-cHHHHHHHHhhHHHHHHHHHHHH Confidence 122222 233344444433333333334444445555443 3333322211 111 1133445666 Q ss_pred HHHHHHHHHHHHHHHHhhccCccchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCC----- Q lcl|Aclame:pro 296 TNDLPFYFDAITSELGLKTLNDKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNM----- 368 (406) Q Consensus 296 ~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~g----- 368 (406) ..+|+-+++.|...++.+-....+...+.+.| .+..+..+.++.+.++++.|+++..-+.+.+++ ++++.- T Consensus 393 ~~~l~~~~~~i~~~~~~~~~~~~d~~~i~i~f~~~~P~n~~e~a~~~~~l~~~giiS~eT~l~~~p~--vdd~e~ek~~~ 470 (537) T protein:vir:78 393 RKVLRWCADMVVSDIALRGLGEYDSNDICFEIEPHVLANELDIATTRKTEAETEALKIGNIMTVAPR--IGDDETLKLIA 470 (537) T ss_pred HHHHHHHHHHHHHHHhhcCCcccccceeeEEeccCCCCCHHHHHHHHHHHHhcCcchHHHHHHhCCC--CCCHHHHHHHH Confidence 77777777777777654322222333334444 345567777888888899999998888777643 222110 Q ss_pred ---------------CeeeeccCccchhhcc-ccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 369 ---------------DRYQSSLNYVFLDKKE-EYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 369 ---------------d~~~~~~n~~~~~~~~-~~~~~~~~~~~gg~~~~~~~~~ 406 (406) +.-.......|-.... ........+..+.+++...|-| T Consensus 471 ee~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 524 (537) T protein:vir:78 471 EELDLDYNELKDALAEQDAQSLDVSPDVQAMLDGLPVNANQPPVDPNQPVADPN 524 (537) T ss_pred HHHHhhhhhhhhhhhhhcccccCcCcchhhhcCCCCCCCCCCCCCccCCCCCCC Confidence 0000000111100000 0000000111111122222222 No 211 >protein:vir:94546 Length: 506 # NCBI annotation: minor head protein # Family: family:all:125 # MgeID: mge:1510 # MgeName: phiJL-1 # Cross-refs: genbank:acc:YP_223886;genbank:gi:62327098;genbank:GeneID:5075562 Probab=97.29 E-value=0.0001 Score=42.41 Aligned_cols=386 Identities=10% Similarity=0.054 Sum_probs=163.4 Q ss_pred Cc--ccccccC-------------------------CCCcchhhHHHhhcCCccc-------c---cchhhhhccHHHHH Q lcl|Aclame:pro 1 MS--FFQPLGT-------------------------SKVSYDDYISSVLAGDVSQ-------K---YLGVSALKNSDILT 43 (406) Q Consensus 1 M~--~f~~~~~-------------------------~~~~~~~~~~~~~~~~~~~-------~---~~~~~a~~~~~v~~ 43 (406) |= |++.+.. +..+.-..+..+..|.... . ..+..-+..+-..- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~li~~~~~~~~~r~~~l~~YY~g~~~~i~~~~~~~~~~~~~~~ki~~n~~~~ 80 (506) T protein:vir:94 1 MDYDLTEHKQANLIYQESLENLTPNKIMKFITHHFNYQRPRLEMLDDYYQGYNLKILDKQSRRHEDGKADHRATHSFAKY 80 (506) T ss_pred CCcchhhhhcceeecccchhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccCCcceeecchHHH Confidence 22 1111110 0000001111122221100 0 00111122333444 Q ss_pred HHHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecC Q lcl|Aclame:pro 44 ATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYR 123 (406) Q Consensus 44 ~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~ 123 (406) .|+..+.-+-.-|+.+.-.+ + .....+..++. ..........+....+.+|.+|.++..+. +|++ .+..++ T Consensus 81 Iv~~~~~~l~G~p~~~~~~d-~-~~~~~l~~~~~-----~N~~~~~~~~~~~~~~~~G~a~~~v~~de-d~~~-~i~~~~ 151 (506) T protein:vir:94 81 IADFQTSYSVGNPINVKLPD-D-GSNSGFDTFNK-----ANDVDAENYDLFLDMSRYGRAYEYVYRGE-DNEE-HLAKLD 151 (506) T ss_pred HHHHhhhhhcccCceeecCc-c-hHHHHHHHHHh-----ccCHhHHHHHHHHHHHhcCeEEEEEEecC-CCee-EEEEEc Confidence 55555555555565543221 1 11222333332 22444566778888899999999988874 4655 466788 Q ss_pred CeeEEEEEccCc--ceEEEEE----eecCCe--------EEEEcceeeEeecc------------CCC---------CCc Q lcl|Aclame:pro 124 PSETTVEETDNH--EIVYTFT----DMLTAK--------QVKCFAHDVIHWKF------------FSH---------DTI 168 (406) Q Consensus 124 p~~~~~~~~~~g--~~~~~~~----~~~~g~--------~~~~~~~~vih~r~------------~~~---------~~~ 168 (406) |..+.+.+++.. .+.+.+. ....+. ...+....+.++.. ++. +.. T Consensus 152 p~~~~~v~dd~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~yt~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~ 231 (506) T protein:vir:94 152 PLDTFVIYSTDVDPKPIMAVRYHQIELVDDNQVSTINYVPETWTADTYTLYNPTPIMGKMQVDTTKPITTFPVVEFKNSN 231 (506) T ss_pred ccceEEEecCCCCCceEEEEEEEeeeeccCCceeEEEEEEEEEeCceEEEeccccCccceeccccccCCccceEEecCCC Confidence 888888776532 2222111 111110 00122222222210 000 112 Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCC---------------------CCHHHHHHHHHHHHHHh Q lcl|Aclame:pro 169 LGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQ---------------------LSGDARQRARQEFEKMR 227 (406) Q Consensus 169 ~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~---------------------~~~e~~~~~~~~~~~~~ 227 (406) .|.|.++.....++..+.+.....+......-|-.++..... ...+....+.+.+.... T Consensus 232 ~~~sd~e~~~~liDa~d~~~S~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (506) T protein:vir:94 232 FRLGDFENVLPLIDLYDAAQSDTANYMTDLNEAMLIIQGDIDTLFEGSDMMNTIDPNDEDAMAKLAKDKLELIKEMKDAN 311 (506) T ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCccccccchhccccccccccccccccccchhHHHhhhhhcC Confidence 366666666666655554443333322222222222211000 00111112222222211 Q ss_pred c--ccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc-cccchh------------HHHHHH Q lcl|Aclame:pro 228 E--GSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV-NSPNQS------------VAQLME 292 (406) Q Consensus 228 ~--g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n------------~~~~~~ 292 (406) . -...+.+.....+.+++-++.......+....+.....|+..-++|..-.+. .++-|. .....+ T Consensus 312 ~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Aik~~~~~l~~k~~~k~ 391 (506) T protein:vir:94 312 MLLLKSGMTVNGTQTSVDAKYINKTYDVVGSEAYKKRVAGDIHKFSHTPDLTDENFASNSSGVAMQYKVLGTVELASTKR 391 (506) T ss_pred eeeecccccccCccccccceeeeecCCHHHHHHHHHHHHHHHHHHhCccccccccccccchHHHHHHHHHHHHHHHHHHH Confidence 0 0111112223345566666666666677778888889999999998643321 121111 123445 Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc-Cccchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCC Q lcl|Aclame:pro 293 DYVTNDLPFYFDAITSELGLKTL-NDKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMD 369 (406) Q Consensus 293 ~~~~~~i~P~~~~ie~~l~~~l~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd 369 (406) .++...|...++.|...+...-- ...+...+.+.| .+..+..+.++.+.++ .|+++...++++++.-. ++..+ T Consensus 392 ~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~i~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~lp~v~--d~~~E 467 (506) T protein:vir:94 392 RMFERGLYARYQIISDIENSIHGDWTFDPQELTFTFRDNLPADNISQIKALVQA--GATLPQKYLYQQLPGVT--NPQDI 467 (506) T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccceEEeCCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCC--CHHHH Confidence 66667777777776666653211 011222233444 3445666777777776 48999999988874322 21110 Q ss_pred eeeeccCccchhhccc----cccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 370 RYQSSLNYVFLDKKEE----YQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 370 ~~~~~~n~~~~~~~~~----~~~~~~~~~~gg~~~~~~~~~ 406 (406) +.-+..... ..+......+.++.++.+++. T Consensus 468 -------~~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (506) T protein:vir:94 468 -------VDMMKEQSANGDYSFDQNGVISNDGQTNTTATQT 501 (506) T ss_pred -------HHHHHHHHHHHhhcchhhcCCCcccCcccccccc Confidence 001111000 001111111111112222222 No 212 >protein:vir:1587 Length: 508 # NCBI annotation: minor capsid protein # Family: family:all:898 # MgeID: mge:32 # MgeName: phig1e # Cross-refs: genbank:acc:NP_695169;swissprot:trembl:o03928;genbank:gi:23455800;interpro:IPR006432;uniprot:O03928;genbank:GeneID:955566 Probab=97.25 E-value=0.00012 Score=42.17 Aligned_cols=381 Identities=13% Similarity=0.077 Sum_probs=170.9 Q ss_pred CcccccccC---------------------CCCcchh----h---HHHhhcCCcc----cccch----hhhhccHHHHHH Q lcl|Aclame:pro 1 MSFFQPLGT---------------------SKVSYDD----Y---ISSVLAGDVS----QKYLG----VSALKNSDILTA 44 (406) Q Consensus 1 M~~f~~~~~---------------------~~~~~~~----~---~~~~~~~~~~----~~~~~----~~a~~~~~v~~~ 44 (406) ||+|.+.+. ...+.++ . +..+..|... ..... ...........+ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ri~~~~~~y~g~~~~~~~~~~~~~~~~~~~~sln~~~~i 80 (508) T protein:vir:15 1 MGLIQRIKDLFWKGAAATGVTGSLSKITDDPRISIDPDEYVRIQTDLDYYSDKLQYIHYQASDGIKKKRLKNTINMAKTA 80 (508) T ss_pred CChHHHHHHHHHHHHHHhccccchHHhhcccccccCHHHHHHHHHHHHHhcCCCcccccccCCCCccccceeecchHHHH Confidence 998754321 0111110 0 1122222111 00000 000111222344 Q ss_pred HHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCC Q lcl|Aclame:pro 45 TSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRP 124 (406) Q Consensus 45 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p 124 (406) ++.+|+-+..=|..+.-.+ +...+..+..+|. - -....-++..+.+.+..|.+++.+..|. |. ..+..++| T Consensus 81 ~~~~A~lv~~e~~~i~v~~-~~~~~e~l~~il~--~---n~f~~~~~~~~e~a~a~G~~~~k~~~d~--~~-~~i~~v~a 151 (508) T protein:vir:15 81 ARRIASVVFNEKAEIHVKD-NNEADKFLNDVLE--D---NDFKNKFEEALEKGVALGGFAMRPYIDG--NH-IKIAWVRA 151 (508) T ss_pred HHHHHhhhhCCCceEEeCC-chHHHHHHHHHHH--h---ccHHHHHHHHHHHHhhcCceEEEEEEeC--Ce-eEEEEEcC Confidence 4555554433233322111 1111222333332 1 2234455667788888899988877763 33 34566667 Q ss_pred eeEEEEEccCcce------------------EEEEEee----c--C----------------CeEEEE---cc-----e- Q lcl|Aclame:pro 125 SETTVEETDNHEI------------------VYTFTDM----L--T----------------AKQVKC---FA-----H- 155 (406) Q Consensus 125 ~~~~~~~~~~g~~------------------~~~~~~~----~--~----------------g~~~~~---~~-----~- 155 (406) +.+.+...+.+++ .|..... . . |..+.+ +. . T Consensus 152 d~~~P~~~d~~~~~~~af~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~e~~~l~~~ 231 (508) T protein:vir:15 152 DQFYPLQSNTNDISEAAIASRTQRTESNQTKYYTLLEFHQWQDNGSYQITNELYKSDSPDIVGNQVPLSTLPVYKELAPQ 231 (508) T ss_pred CeeEEEEEcCCCeEEEEEEEEEEeecCCCceEEEEEEEEEEecCcceEEEEEEEecCCchhcCcccchhhcccccCCCcc Confidence 6665543333322 1110000 0 0 111100 00 0 Q ss_pred ---------eeEeeccCC-----CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecC-CCCHHHHHHHH Q lcl|Aclame:pro 156 ---------DVIHWKFFS-----HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGA-QLSGDARQRAR 220 (406) Q Consensus 156 ---------~vih~r~~~-----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~ 220 (406) -..||+.+- ...++|+|...-+...++..+........-++.| .+..++...- ..+++....+. T Consensus 232 ~~~~g~~~p~f~y~~~~~~N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~~~-~~~i~v~~~~l~~d~~~~~~~~ 310 (508) T protein:vir:15 232 VTISGLQRPLFAYFKTPGANNINIESPLGLGVVDNAKHVLDDINDTHDQFIWEIRLG-QKHIAVQPGMLRFDDEHKPTFD 310 (508) T ss_pred eEecCCCcceeEEecCCccccccCCCCcCCchHhhhHHHHHHHHHHHHHHHHHHHhc-ccceeechHHhcCCCCCccccC Confidence 112444221 1246799999999999998887777777777654 3443331100 00111000000 Q ss_pred HHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccch-hHHH---------- Q lcl|Aclame:pro 221 QEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQ-SVAQ---------- 289 (406) Q Consensus 221 ~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~-n~~~---------- 289 (406) .. .+.|.+-.. --++|..++.++....+-++.+..+...+.|....|++|..+|..+++. +..+ T Consensus 311 ~~-~~~~~~~~~----~~~~~~~i~~~~~~ir~e~~~~~~~~~l~~~~~~~gls~~~f~~~~~~~~TAtei~s~~~~~~~ 385 (508) T protein:vir:15 311 TE-QNVYVGVLS----DDNNGLGVKDMTTPIRTVQYKDAIDHFIKEFEVQIGLSTGTFSYSNDGVKTATEVVSNNSMTYQ 385 (508) T ss_pred CC-CeeEEeccC----CCCCCCceeEeecccChHHHHHHHHHHHHHHHHHhCCCchhcccccCccccHHHHHHHHHHHHH Confidence 00 000110000 0134556788888778888999999999999999999999998654331 1111 Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhhccCccc-----------hhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHH Q lcl|Aclame:pro 290 ---LMEDYVTNDLPFYFDAITSELGLKTLNDKD-----------RRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQ 353 (406) Q Consensus 290 ---~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~-----------~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE 353 (406) ..+..++.+|..+++.|-......-+...+ .....+.|+ +..|.++.++...+++.+|+++.-+ T Consensus 386 t~~~~~~~~~~al~~lv~~il~l~~~~~~~~~g~~~~~~~~~~~~~~v~v~f~D~i~~d~~~~~~~~~~~v~aGi~s~e~ 465 (508) T protein:vir:15 386 TRSSYLTMVEKAIDELCQSIFELANAGALFDDGKPLFTLDSASQPLDIECHFDDGVFVNKDKQLEEDAKVLAIGALSKQT 465 (508) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccCCcceEEEeCCCCCCCHHHHHHHHHHHHhcCCCCHHH Confidence 122334455555555544443321111111 111233443 3557788888899999999999998 Q ss_pred HHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCC Q lcl|Aclame:pro 354 GLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 354 ~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~ 405 (406) ++... +-+++++.++-+.. +.......++... ..+..++.+++ T Consensus 466 ~i~~~--~g~~deea~~el~r-----i~~E~~~~~~~~~--~~~~~~g~~ge 508 (508) T protein:vir:15 466 FLQRN--YGMTDEQAAEELAK-----IQSEAPTDTFEGG--RSAILNGGDGE 508 (508) T ss_pred HHHhc--CCCChHHHHHHHHH-----HHHhccccCcccc--ccccCCCCCCC Confidence 87653 22333433222211 1100000011100 01112222222 No 213 >protein:vir:105461 Length: 470 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529871;genbank:gi:90592611;genbank:GeneID:3974525 Probab=97.24 E-value=0.00012 Score=42.07 Aligned_cols=368 Identities=12% Similarity=0.029 Sum_probs=163.0 Q ss_pred Ccc------cccccC---CCCcchhhHHHhhcCCc---------------c---cccchhhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MSF------FQPLGT---SKVSYDDYISSVLAGDV---------------S---QKYLGVSALKNSDILTATSIIAGDIA 53 (406) Q Consensus 1 M~~------f~~~~~---~~~~~~~~~~~~~~~~~---------------~---~~~~~~~a~~~~~v~~~i~~ia~~ia 53 (406) |=. -++... .....-..+.....|.- . ....+..-+.++-....|+..++-+- T Consensus 1 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~Yy~g~~~I~~~~~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~ 80 (470) T protein:vir:10 1 MELDALKKLIQNTSTSRNDLINNYKQAVNYYENKTDITTRNNGKAKLNKEGKKDPLRSADNRIPSNFYQLLVDQEAGYVA 80 (470) T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhccccchhcccccccccccccCCcccccchHHHHHHhhhhhee Confidence 110 000000 00000000111111100 0 00000111122223344555555555 Q ss_pred cceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEcc Q lcl|Aclame:pro 54 RFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETD 133 (406) Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~ 133 (406) .-|+.+...+.+ ....+...++. +..+-...+....+.+|.+|.++..+.. |++ .+..++|..+.+.+++ T Consensus 81 G~p~~~~~~d~~--~~~~l~~~~~~------~~~~~~~~l~~~~~~~G~a~~~~y~d~~-~~~-~~~~~~p~~~~~v~d~ 150 (470) T protein:vir:10 81 SVFPDIDVGKDA--DNKKIIDVLGD------DRALTLNGLLVDSSNAGRAWLHYWIDED-GNF-RYGIIQPDQITPIYAT 150 (470) T ss_pred ccceeeecCchH--HHHHHHHHHhh------hHHHHHHHHHHHHhhcCeeEEEEEecCC-Cce-EEEEEcccceEEEEcC Confidence 566655322221 12234444431 2345556778889999999999988744 665 4677888888888765 Q ss_pred C--cceEEEE----EeecCC-eE----EEEcceeeEeeccC-------------------------------------C- Q lcl|Aclame:pro 134 N--HEIVYTF----TDMLTA-KQ----VKCFAHDVIHWKFF-------------------------------------S- 164 (406) Q Consensus 134 ~--g~~~~~~----~~~~~g-~~----~~~~~~~vih~r~~-------------------------------------~- 164 (406) . +.+...+ .....+ .. ..+....+.|++.. | T Consensus 151 ~~~~~~~a~ir~y~~~~~~~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPv 230 (470) T protein:vir:10 151 TLDNKLLGILRSYKQLDPDSGKYFTVHEYWTDKEAQFFRTNATDSTVIEPYNIITSYDLSAGYETGQSNTLKHNFGRVPF 230 (470) T ss_pred CCCCceEEEEEEEEeeecCCceEEEEEEEEcCCcEEEEEeecCcceeccccccccccccccccccccccccccCCCeeeE Confidence 4 3332211 111111 11 12233334333210 0 Q ss_pred ---CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeecc-- Q lcl|Aclame:pro 165 ---HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFD-- 239 (406) Q Consensus 165 ---~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~-- 239 (406) .+...|.|-++.+...++..+.+.....+.++..+.|-.++........ ..+...+.. .+.+.++ T Consensus 231 v~~~nn~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lvl~g~~~~~~---~~~~~~~~~-------~~~i~~~~~ 300 (470) T protein:vir:10 231 IEFSKNKYRLPELNKYKGLIDAYDDIYNGFINDLDDVQTVILVLTNYGGADL---HQFMNDLRK-------YKSIKINNT 300 (470) T ss_pred EEeecCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhcCcceeeecCCcccc---chhhhhhhh-------cCeEeccCC Confidence 0123477888888888887777666666666666667666654322211 112222211 1122221 Q ss_pred ---CCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchh------------HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 240 ---STMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQS------------VAQLMEDYVTNDLPFYFD 304 (406) Q Consensus 240 ---~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n------------~~~~~~~~~~~~i~P~~~ 304 (406) .+.+++-++.......+....+...+.|+..-++|..-....++-|. .....+..+..+|.-+++ T Consensus 301 ~~~~~~~~~~lt~~~~~~~~~~~~~~L~~~I~~~s~~p~~~~~~~gn~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~ 380 (470) T protein:vir:10 301 GNGDNSGVDKLQIDIPVEARDDALKITRKNIFLFGQGIDPANFESSNASGVAIKMLYSHLELKAAKTQTYFEHAINELVR 380 (470) T ss_pred CCCcCceeEEEeecCChHHHHHHHHHHHHHHHHHhCCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 23344444433333445556677777888877777533221121111 123334555566666666 Q ss_pred HHHHHHHhhccCccchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhh Q lcl|Aclame:pro 305 AITSELGLKTLNDKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDK 382 (406) Q Consensus 305 ~ie~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~ 382 (406) .|...++.+ ..+...+.+.| .+..+..+.++.+.++ .|+++..-+++++++ ++++... +.-+.. T Consensus 381 ~i~~~l~~~---~~d~~~i~i~f~~~~p~d~~e~~~~~~~~--~g~iS~et~l~~~p~--v~D~~~E-------~eri~~ 446 (470) T protein:vir:10 381 AIMRYLNFS---DADKRHISQHWTRTKVEDSLTKAQIVSTV--ANYSSKEAVAKANPI--VDDWQQE-------LKDLAK 446 (470) T ss_pred HHHHHhccc---CcccceeeEEeccCCCCCHHHHHHHHHHH--hccCcHHHHHHhCCC--CCCHHHH-------HHHHHH Confidence 665554421 11222233344 3445666677777665 589998888887754 2221110 011111 Q ss_pred ccc----cccccCcccCCCccCCCC Q lcl|Aclame:pro 383 KEE----YQDKVGIKGKGGEVNAEE 403 (406) Q Consensus 383 ~~~----~~~~~~~~~~gg~~~~~~ 403 (406) ... ...+.. ...+++.|+++ T Consensus 447 E~~e~~~~~~~~~-~~~~~~~dde~ 470 (470) T protein:vir:10 447 DKEENDPYSNQAD-ELNGKGVNDEQ 470 (470) T ss_pred HHHHHHHhhcccc-ccCCCCCCCCC Confidence 100 011111 12222223333 No 214 >protein:vir:107112 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1571 # MgeName: CNPH82 # Cross-refs: genbank:acc:YP_950601;genbank:gi:119953681;genbank:GeneID:4643121 Probab=97.13 E-value=0.00016 Score=41.43 Aligned_cols=371 Identities=10% Similarity=0.007 Sum_probs=159.1 Q ss_pred Cc--ccccccCC-----------------CCcchhhHHHhhcCCcc--------------cccchhhhhccHHHHHHHHH Q lcl|Aclame:pro 1 MS--FFQPLGTS-----------------KVSYDDYISSVLAGDVS--------------QKYLGVSALKNSDILTATSI 47 (406) Q Consensus 1 M~--~f~~~~~~-----------------~~~~~~~~~~~~~~~~~--------------~~~~~~~a~~~~~v~~~i~~ 47 (406) -+ +|+..... ....-..+..+..|... ....+..-+.++-...+|+. T Consensus 12 ~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~r~~~~~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~ivd~ 91 (478) T protein:vir:10 12 YHEQVVEQIKPKYETQEEMILRLVREHKENIDNITMGERYYNHHPDILDAPFKRDVNGDYDETKPDWRMYTNYHQNLVDQ 91 (478) T ss_pred hhhHHHHHhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhhhcccccccccccceeccchHHHHHHH Confidence 00 01000000 00000011111111100 00000001123344556677 Q ss_pred HHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeE Q lcl|Aclame:pro 48 IAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSET 127 (406) Q Consensus 48 ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~ 127 (406) .+.-+-.-|+.+...+ +. ....+...++ | ...+....+....+.+|.+|.++..+. +|++ .+..++|..+ T Consensus 92 ~~~yl~g~p~~~~~~~-~~-~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~v~~d~-~~~~-~~~~~~p~~~ 161 (478) T protein:vir:10 92 KVAYAVANPVTFGVDN-DK-ALKQIQHTLN---H---KWDDKLVDILTAASNKGIEWVQPYVDE-EGEF-KTFRVPAEQA 161 (478) T ss_pred HhhhhcccCceeecCC-hH-HHHHHHHHHh---c---cHHHHHHHHHHHHhhCCeEEEEEEecC-CCce-EEEEEcccce Confidence 7766666676653222 11 1122333332 2 455667778889999999999887774 4555 4777888888 Q ss_pred EEEEccC--cceEEEE--EeecCCeE-EEEcceeeEeeccC--------------------------C---------CCC Q lcl|Aclame:pro 128 TVEETDN--HEIVYTF--TDMLTAKQ-VKCFAHDVIHWKFF--------------------------S---------HDT 167 (406) Q Consensus 128 ~~~~~~~--g~~~~~~--~~~~~g~~-~~~~~~~vih~r~~--------------------------~---------~~~ 167 (406) .+.+++. +.+.+.+ +...+-.. ..+.++.|.+++.. + .+. T Consensus 162 ~~v~d~~~~~~~~~~ir~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~ 241 (478) T protein:vir:10 162 VPIWTNKERDELQAFIRVYELDGAERVEYWTKDDVTFYELKEGQLIPDFYRSEDHIQPHYYQGNKLMSWGRVPFIPFKNN 241 (478) T ss_pred EEEEcCCCCCceEEEEEEEeeeCceEEEEEeCCcEEEEEecCCeeeccccccccccccceecccccccCCcceEEEeccC Confidence 8777643 4432221 11111111 12234444333210 0 012 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeec--cCCceee Q lcl|Aclame:pro 168 ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVF--DSTMEYT 245 (406) Q Consensus 168 ~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl--~~g~~~~ 245 (406) ..|.|.++.+...++..+.+.....+.++....|-.++..... ++.......+.. .+++.+ +.|.+++ T Consensus 242 ~~g~sd~e~v~~liDa~~~~~S~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 311 (478) T protein:vir:10 242 PQEVSDLFMYKTIIDALDKRLSDTQNTFDESVELIYILKGYEG---EDMKDFMHNLKY-------YKAISVAGESGSGVD 311 (478) T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhCcceeeecCCc---ccccchhhhhhh-------CceeEecCCCCCcce Confidence 3477888877777777666655555555555556444432221 111111111111 122322 2334444 Q ss_pred eccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcc-cccchhH------------HHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 246 PLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV-NSPNQSV------------AQLMEDYVTNDLPFYFDAITSELGL 312 (406) Q Consensus 246 ~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n~------------~~~~~~~~~~~i~P~~~~ie~~l~~ 312 (406) .+........+.+..+...+.|+..-++|..-.+. .++-|.. ....+..+..+|.-+++.|.+.+.. T Consensus 312 ~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~~n~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~ 391 (478) T protein:vir:10 312 TIKVEVPIDSVKEYTKMLRDYIIEFGQGVDFQQDKFGNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYRL 391 (478) T ss_pred EEeecCCHHHHHHHHHHHHHHHHHHhCCcCcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC Confidence 45444455666777778888899888888543321 2221111 1222333444444444444433321 Q ss_pred hccCccchhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhcccccccc Q lcl|Aclame:pro 313 KTLNDKDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKV 390 (406) Q Consensus 313 ~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~ 390 (406) ..+...+.+.|. +..+..+.++.+.++ .|+++...+.++++.- +++..+ +.-+........+. T Consensus 392 ----~~d~~~i~i~f~~~~p~~~~e~~~~~~~~--~g~iS~et~i~~~~~v--~d~~~E-------~~ri~~E~~~~~~~ 456 (478) T protein:vir:10 392 ----DVRVQDIEITFNFNVMVNELENSQIAMNS--TGLLSKETILGNHSWV--QDPVAE-------MERIEQENIELNQQ 456 (478) T ss_pred ----CcccccceEEeCCCCCCCHHHHHHHHHHH--hCCCChHHHHHhCCCC--CCHHHH-------HHHHHHHHHHHHHh Confidence 112222334442 333555666666654 6888887777777442 111100 00000000000111 Q ss_pred CcccCCCccCCCCCCC Q lcl|Aclame:pro 391 GIKGKGGEVNAEEDKS 406 (406) Q Consensus 391 ~~~~~gg~~~~~~~~~ 406 (406) .....+++++++++++ T Consensus 457 ~~~~~~~~~d~~~~~~ 472 (478) T protein:vir:10 457 LPDIEEGLNDEQQRQS 472 (478) T ss_pred ccccCCCCcccccccC Confidence 1111111111111111 No 215 >protein:vir:9922 Length: 489 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:178 # MgeName: 315.6 # Cross-refs: genbank:acc:NP_795684;genbank:gi:28876464;genbank:GeneID:1257980 Probab=96.76 E-value=0.00036 Score=39.46 Aligned_cols=388 Identities=12% Similarity=0.075 Sum_probs=162.7 Q ss_pred Cc-----cccc---------------ccCCCCcchhhHHHhhcCCccc-----ccc---hhhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MS-----FFQP---------------LGTSKVSYDDYISSVLAGDVSQ-----KYL---GVSALKNSDILTATSIIAGDI 52 (406) Q Consensus 1 M~-----~f~~---------------~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~a~~~~~v~~~i~~ia~~i 52 (406) |. .+.. ........-..+..+..|.... ... +..-+..+-..-+|+..+.-+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~yy~g~~~i~~~~~~~~~~~~~~ki~~n~~~~iv~~~~~~l 80 (489) T protein:vir:99 1 MLQEDFEAIDYESKLWIDQLKNYISRFKAEQLERLKELKRYYLGDNNIKYRPAKTDKYAADNRIASDFAKYITVFEQGYM 80 (489) T ss_pred CCccceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccccccccCCcceeecchHHHHHHHHhhhh Confidence 11 1111 1101111111122222221100 000 000122333445566666555 Q ss_pred ccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecC---CCceeEEEeecCCeeEEE Q lcl|Aclame:pro 53 ARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDP---KTNQALQFQFYRPSETTV 129 (406) Q Consensus 53 a~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~---~~g~~~~l~~l~p~~~~~ 129 (406) -.-|+.+...+.. ....+..++.. | ....+...+....+.+|.+|.++.... ..| ...+..++|..+.+ T Consensus 81 ~g~~~~~~~~d~~--~~~~l~~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~~~~~d~~~-~~~i~~~~p~~~~~ 152 (489) T protein:vir:99 81 LGVPVEYKNENKD--LQAAIDLMSVR--N---NEDYHNVKIKTDLSIYGRAYELLTVEKIDDKKT-EVKLYQLPAEQTFV 152 (489) T ss_pred ccCCceeecCChh--HHHHHHHHHhh--c---ChhHHHHHHHHHHhhCCeEEEEEeeccCcCCCc-ceEEEEEcccceEE Confidence 5556654322211 12223333321 2 334667888889999999997775421 223 34577788888887 Q ss_pred EEccCc--ceEEEE--E--eecCCe----EEEEcceeeEeeccC--------------------C----CCCccccCHHH Q lcl|Aclame:pro 130 EETDNH--EIVYTF--T--DMLTAK----QVKCFAHDVIHWKFF--------------------S----HDTILGRSPLL 175 (406) Q Consensus 130 ~~~~~g--~~~~~~--~--~~~~g~----~~~~~~~~vih~r~~--------------------~----~~~~~G~s~~~ 175 (406) .+++.. .+.+.+ + ....+. ...+.++.+.+++.. | .+...|.|.+. T Consensus 153 v~dd~~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~s~~~ 232 (489) T protein:vir:99 153 IYDDTYQRNSLMAVHFYDIDYGSGKRKQIIKAYTSDTIYTYEDYNLETKGMRLKDYEGHFFKGVPVNEYANNEERTGAYE 232 (489) T ss_pred EEcCCCCCceEEEEEEEEEecCCCceEEEEEEEeCCcEEEEEecCCCcccceecccccccCCceeEEEeecCCCCCCchh Confidence 776543 232211 1 111111 112334444443310 0 01123667676 Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhc-------ccccCceeeccC-------C Q lcl|Aclame:pro 176 SLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMRE-------GSVGGSPLVFDS-------T 241 (406) Q Consensus 176 ~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-------g~~~~~~~vl~~-------g 241 (406) .+...++..+.+.....+.....+.|-.++... ....+........+..... +...++++.+.. + T Consensus 233 ~v~~liDa~d~~~s~~~~~~~~~~~~~l~i~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (489) T protein:vir:99 233 SVLDNIDAYDLSQSELANFQQDSVNALLVIAGN-AYTGADENDYLDDGRLNPNGRLAISIGFKKAQVLILDDNPNPNGVK 311 (489) T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccC-CcccccchhhhhhcccccccccccccccccceeeeeccccCccccc Confidence 666666655555444444344444444343322 1222222222222211111 111223333332 2 Q ss_pred ceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHh-cccccchh--H----------HHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 242 MEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKL-GVNSPNQS--V----------AQLMEDYVTNDLPFYFDAITS 308 (406) Q Consensus 242 ~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~l-g~~~~~~n--~----------~~~~~~~~~~~i~P~~~~ie~ 308 (406) .+.+-+........+....+...+.|+..-++|..-. +..++-|. . .+..+..+...|.-+++.|.. T Consensus 312 ~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~ 391 (489) T protein:vir:99 312 PQAYFLKKEYDTAGSEAYKNRLVADILRFTFTPDTQDMKFSGVQSGESMKYKLMASDNYREKQERLFKKGLMRRLRLAAN 391 (489) T ss_pred cceeeeeecCChHHHHHHHHHHHHHHHHHhCCcccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 2334444443444445566777888888888885332 22222111 1 233345556666666666666 Q ss_pred HHHhhccCcc---chhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhc Q lcl|Aclame:pro 309 ELGLKTLNDK---DRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKK 383 (406) Q Consensus 309 ~l~~~l~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~ 383 (406) .+...-.... ....+.+.|. +..+..+.++.+.+++ |+++...+.++++. ++++... .-+.-+... T Consensus 392 ~~~~~~~~~~~~~~~~~i~v~f~~~~p~d~~~~~~~~~kl~--giis~et~~~~l~~--v~~~d~~-----~E~~ri~~E 462 (489) T protein:vir:99 392 IWAIKGNEATTYSLVNDTSIVFTPNLPQNDNEIVTAAQNLY--GIVSDQTIFEILNT--VTGVDAE-----AELKRLKEE 462 (489) T ss_pred HHhhcCCccccccccccceEEeCCCCCcCHHHHHHHHHHHh--ccCCHHHHHHhcCC--CCchhHH-----HHHHHHHHH Confidence 5543221111 1122334442 3445666777777764 89999888887632 2111111 001111111 Q ss_pred cccccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 384 EEYQDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 384 ~~~~~~~~~~~~gg~~~~~~~~~ 406 (406) ........+...+|+.++++++. T Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~ 485 (489) T protein:vir:99 463 ADKKQSLPEPRLVGDASGQEEPT 485 (489) T ss_pred HHHHhccccccccCCCCCCcCCC Confidence 11111112222333333333322 No 216 >protein:vir:102950 Length: 471 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945279;genbank:gi:39653714;interpro:IPR006428;uniprot:Q708N3;genbank:GeneID:2672864 Probab=96.59 E-value=0.00048 Score=38.76 Aligned_cols=369 Identities=10% Similarity=0.006 Sum_probs=161.8 Q ss_pred Ccc--c----ccc---cCCCCcchhhHHHhhcCCc----------------------ccccchhhhhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MSF--F----QPL---GTSKVSYDDYISSVLAGDV----------------------SQKYLGVSALKNSDILTATSIIA 49 (406) Q Consensus 1 M~~--f----~~~---~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~a~~~~~v~~~i~~ia 49 (406) |.. . ..+ .+...+.-..+..+..|.. .....+..-+.++-....|+..+ T Consensus 1 ~~~e~~~~~i~~~~~~~~~~~~~~~~~~~Yy~g~hdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~ 80 (471) T protein:vir:10 1 MEIEVIKKIISSQMVKHGKFVSQAAEAEKYYRNENDIKRKRKPADKKGAENEAKAEDNAFRNADNRISHNWHQLLLDQKK 80 (471) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhhhcccccccccccccccccceeccchhHHHHHhhh Confidence 221 0 000 0000000011111111110 00001111122333445566666 Q ss_pred HhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEE Q lcl|Aclame:pro 50 GDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTV 129 (406) Q Consensus 50 ~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~ 129 (406) .-+-.-|+.+...+.+ ....+...+. | ........+....+.+|.+|.++..+..+|++ .+..++|..+.+ T Consensus 81 ~yl~G~p~~~~~~~~~--~~~~l~~~~~---n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~g~~-~~~~~~p~~~~~ 151 (471) T protein:vir:10 81 AYALTYPPTFDVDDKK--VNDMIVDVLG---D---DYERISKQLCVNAGNAGIAWLHVWKDASDNSF-RYACVDSKEVIP 151 (471) T ss_pred hhhcccCceeccCChH--HHHHHHHHHh---c---CHHHHHHHHHHHHhhCCeEEEEEEeeCCCCee-EEEEEcccceEE Confidence 6665666655322211 1112222221 2 23455677788999999999999888666765 477789998888 Q ss_pred EEccCc--ceEEE---EE-e-ecCCeE----EEEcceeeEeeccC--------------------------------CC- Q lcl|Aclame:pro 130 EETDNH--EIVYT---FT-D-MLTAKQ----VKCFAHDVIHWKFF--------------------------------SH- 165 (406) Q Consensus 130 ~~~~~g--~~~~~---~~-~-~~~g~~----~~~~~~~vih~r~~--------------------------------~~- 165 (406) .+++.. .+.+. +. . ...+.. ..+..+.+.|++.. +. T Consensus 152 i~d~~~~~~~~~~ir~~~~~~~~~~~~~~~~~vy~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 231 (471) T protein:vir:10 152 IYSKSLDKKSIGVLRVYSSIDETDGKNYTVYEYWNDKECSFYRHEKEKPLEELETFQAISLIDTMNGDRSSDNSFKHDFG 231 (471) T ss_pred EEcCCCCCceEEEEEEEEeeccCCCceeEEEEEEeCCcEEEEEecCCcccccccccccccccccccccccccccccCCCC Confidence 777643 23221 11 1 111111 12234444444311 00 Q ss_pred --------CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceee Q lcl|Aclame:pro 166 --------DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLV 237 (406) Q Consensus 166 --------~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~v 237 (406) +...|.|-++.....++..+.+.....+.+...+.|-.++....... .+.....+.. .+++. T Consensus 232 ~iPvv~~~n~~~~~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~---~~~~~~~~~~-------~~~i~ 301 (471) T protein:vir:10 232 LVPFIPFKNNEIETNDLKPIKDLVDVYDKVFSGFVNDTDDVQEVIFVLTNYGGQD---KQEFLEDLKR-------YKMIK 301 (471) T ss_pred ceeEEEeccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCccc---cchhHHHhhc-------CCeEE Confidence 11236777777777777666655555555555555655544322111 1111111111 11222 Q ss_pred c-----cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchh--H----------HHHHHHHHHHHHH Q lcl|Aclame:pro 238 F-----DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQS--V----------AQLMEDYVTNDLP 300 (406) Q Consensus 238 l-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n--~----------~~~~~~~~~~~i~ 300 (406) + ..+.+++-+........+....+...+.|+..-++|..-....++-|. . ....+..+...+. T Consensus 302 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~tp~~~~~~~gn~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~ 381 (471) T protein:vir:10 302 MDNDGMGDQSGVTTIAIDIPTEARNLILERTKKQIFISGQGVNPETDKLGNSSGVALKFLYSLLELKAGNMETQFRSGYA 381 (471) T ss_pred ecCCCCccCccceEEeecCChHHHHHHHHHHHHHHHHHhCCcCCCcccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 2 122344444443344445666777778888888887543322221111 1 1223344444555 Q ss_pred HHHHHHHHHHHhhccCccchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCcc Q lcl|Aclame:pro 301 FYFDAITSELGLKTLNDKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYV 378 (406) Q Consensus 301 P~~~~ie~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~ 378 (406) -+++.|...+. ..+...+.+.| .+..+..+.++.+.++ .|+++..-++++++. ++++. .-+. T Consensus 382 ~~~~li~~~~~-----~~d~~~i~i~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~~p~--v~D~~-------~E~e 445 (471) T protein:vir:10 382 TLVKMILKHLG-----LSDKLKIKQTWTRNSINNDTEMAQVVSTL--ATITSRENVAKSNPI--VEDWQ-------DELR 445 (471) T ss_pred HHHHHHHHHhc-----cCCCceeEEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCC--CCCHH-------HHHH Confidence 55555544432 22223333444 3444566677777765 578998888887643 21111 0011 Q ss_pred chhhccccccccCcccCCCccCCCCC Q lcl|Aclame:pro 379 FLDKKEEYQDKVGIKGKGGEVNAEED 404 (406) Q Consensus 379 ~~~~~~~~~~~~~~~~~gg~~~~~~~ 404 (406) -+......+........+++++.+-+ T Consensus 446 ri~~E~~~~~~~~~~~~~~~~~~e~~ 471 (471) T protein:vir:10 446 LQKAEQEGRSEKLYDMEEVEHESEVE 471 (471) T ss_pred HHHHHHHHHHhcccccCCCCCccccC Confidence 11111111111111222223222222 No 217 >protein:vir:79703 Length: 505 # NCBI annotation: minor structural protein gp61 # Family: family:all:898 # MgeID: mge:1873 # MgeName: LL-H # Cross-refs: genbank:acc:YP_001285880;genbank:gi:148750838;genbank:GeneID:5220405 Probab=96.35 E-value=0.00072 Score=37.83 Aligned_cols=375 Identities=11% Similarity=0.060 Sum_probs=175.0 Q ss_pred Ccccc------cccC----CCCcchh-------hHHHhhcCCcccccch---------hhhhccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MSFFQ------PLGT----SKVSYDD-------YISSVLAGDVSQKYLG---------VSALKNSDILTATSIIAGDIAR 54 (406) Q Consensus 1 M~~f~------~~~~----~~~~~~~-------~~~~~~~~~~~~~~~~---------~~a~~~~~v~~~i~~ia~~ia~ 54 (406) +.+|. .+++ ...+..+ .+..+..|... .+.. ...........+++.+|+-+.. T Consensus 12 ~~~~~~~~~~~~~~~i~d~~~i~~~~~~~~~i~~~~~~Y~g~~~-~l~~~~~~~~~~~~~~~slnl~~~i~~~~A~ll~~ 90 (505) T protein:vir:79 12 RKGSAAVGMTKSLGQIIDDPRINLPADEVERIARDKRYYMDDFK-QVTHKNSYGDTQKHELQSVNVTKLASAKLASLIFN 90 (505) T ss_pred HHhhhhhcchhhhhhhhcccCCCCCHHHHHHHHHHHHHhcCCCc-cccccccCCCccccceeecchHHHHHHHHHhhhcC Confidence 22222 2221 1111111 12333433221 1111 0111122223445555555544 Q ss_pred ceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccC Q lcl|Aclame:pro 55 FPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDN 134 (406) Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~ 134 (406) =|..+.- +.+ .....+..++. .-.....++..+.+.+..|.+++.+..|. |. ..+..++|+.+.+...+. T Consensus 91 e~~~i~~-~d~-~~~e~l~~i~~-----~n~f~~~~~~~~e~a~a~G~~~~k~~~D~--~~-~~i~~v~ad~~~P~~~d~ 160 (505) T protein:vir:79 91 EQCQVTV-SDE-TANDFLDDVFQ-----QNDFYTTFEEKLEEWIALGSGCVRPYVDS--GK-IKLAWATADQVYPLQADT 160 (505) T ss_pred CCceeec-CCh-HHHHHHHHHHH-----hccHHHHHHHHHHHHhhcCCeEEEEEEeC--Cc-eEEEEEcCCeeEEEEEcC Confidence 3333321 211 12223333332 12235566777888888899988887763 33 345566676666654333 Q ss_pred cce------------------EEEEEee---cC------------------CeEEE---------------E---cceee Q lcl|Aclame:pro 135 HEI------------------VYTFTDM---LT------------------AKQVK---------------C---FAHDV 157 (406) Q Consensus 135 g~~------------------~~~~~~~---~~------------------g~~~~---------------~---~~~~v 157 (406) +++ .|..... .+ |..+. + +.-.+ T Consensus 161 ~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~~~l~~~~~~~g~~~p~f 240 (505) T protein:vir:79 161 NQVNELAIASRTTEVENHRTIYYTLLEFHQWDHGDYVITNELYRSEAAETVGINVPLNSLEQYEGLEPQVKITGLKHPLF 240 (505) T ss_pred CCeEEEEEEEEEEEecCCcceEEEEEEEEEecCceEEEEEEEEecCCCCccCcccchhhcccccccCcceeecCCCcceE Confidence 321 1100000 00 11100 0 01123 Q ss_pred EeeccCC---C--CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceE----EeecCCCCHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 158 IHWKFFS---H--DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGIL----TMKGAQLSGDARQRARQEFEKMRE 228 (406) Q Consensus 158 ih~r~~~---~--~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~----~~~~~~~~~e~~~~~~~~~~~~~~ 228 (406) .|||.+. . ..+.|+|.+.-+...++..+..-.....-++.|...-.+ +........+...... ..+. T Consensus 241 ~~~~~~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g~~~i~v~~~~l~~~~~~~~~~~~~~~----~~fd 316 (505) T protein:vir:79 241 AFYRNKGANNKNFTSPMGMSLIDNSYTVIDAINRTHDQFVDEVKKGQRRLIVPAEWLKTGSSYGGQASETHP----PMFD 316 (505) T ss_pred EEecCCcccccccCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhcccceeechHHhcccCCCCcccccccc----cCCC Confidence 4555321 1 246799999999999998887777777777765443222 2111111111000000 0011 Q ss_pred cccc-C-ceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccch-hHH-------------HHHH Q lcl|Aclame:pro 229 GSVG-G-SPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQ-SVA-------------QLME 292 (406) Q Consensus 229 g~~~-~-~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~-n~~-------------~~~~ 292 (406) ++.. - .+..-+++..++.++....+.++.+..+...++|+...|+++..+|...++. +.. ...+ T Consensus 317 ~~~~~y~~~~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~~~~~~~~~~TAtei~s~~~~l~~t~~~~~ 396 (505) T protein:vir:79 317 PDETVYQAMYGDASEVGFHDATSPIRVADYQATMDFFLREFENQTGLSQGTFTTSPSGIQTATEVVTNNSQTYQTRSSYI 396 (505) T ss_pred ccceeeeeccCCCCCCceEEecccCCHHHHHHHHHHHHHHHHHHhCCChhhcCCCccccchHHHHHHHHhHHHHHHHHHH Confidence 1000 0 0001123456888888888888999999999999999999999998644331 111 1223 Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCccc---------hhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCC Q lcl|Aclame:pro 293 DYVTNDLPFYFDAITSELGLKTLNDKD---------RRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQ 361 (406) Q Consensus 293 ~~~~~~i~P~~~~ie~~l~~~l~~~~~---------~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~ 361 (406) ..++.+|..+++.|-.......+...+ .....+.|+ +..|.++..+...+++.+|+++.-+++... + T Consensus 397 ~~~~~al~~li~~i~~~~~~~~~~~~g~~~~~~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~v~~Gi~s~e~~l~~~--~ 474 (505) T protein:vir:79 397 TQVEKTIKALTYAILELASVPSFYADGQARWTGDVDSLDITINFNDGVFVDQESKRAADLQAVQAQVMPKKQFLMRN--Y 474 (505) T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccCCCCceeEEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHhc--C Confidence 344555555555555443321111110 112334443 445677888889999999999998887663 2 Q ss_pred CCCCCCCCeeeeccCccchhhccccccccCcccCCCc Q lcl|Aclame:pro 362 KSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE 398 (406) Q Consensus 362 p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~ 398 (406) -+++++..+-+. -+..... .....-...||| T Consensus 475 ~~~eeea~~el~-----ri~~E~~-~~~p~~~~~gg~ 505 (505) T protein:vir:79 475 GLDEEEADEWLA-----QIDAENS-TAEPEFNQFGGD 505 (505) T ss_pred CCChHHHHHHHH-----HHHHhcc-ccCCCchhccCC Confidence 233333321111 1111000 011112344566 No 218 >protein:vir:9815 Length: 500 # NCBI annotation: putative minor capsid protein # Family: family:all:898 # MgeID: mge:176 # MgeName: 315.4 # Cross-refs: genbank:acc:NP_795577;genbank:gi:28876344;genbank:GeneID:1257866 Probab=95.86 E-value=0.0013 Score=36.33 Aligned_cols=377 Identities=15% Similarity=0.067 Sum_probs=171.6 Q ss_pred CcccccccC------------C--------CCcch----hh---HHHhhcCCccc--cc------chhhhhccHHHHHHH Q lcl|Aclame:pro 1 MSFFQPLGT------------S--------KVSYD----DY---ISSVLAGDVSQ--KY------LGVSALKNSDILTAT 45 (406) Q Consensus 1 M~~f~~~~~------------~--------~~~~~----~~---~~~~~~~~~~~--~~------~~~~a~~~~~v~~~i 45 (406) ||+|.+.+. . ..+.. .. +..+..|.+.. +. .............++ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (500) T protein:vir:98 1 MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAA 80 (500) T ss_pred CchHHHHHHHHHHHHHHhhcchhhhhhccccccCCHHHHHHHHHHHHHhcCCCCCcccccCCCCcccCceeecchHHHHH Confidence 998854221 0 01111 01 11222222110 00 011112222223344 Q ss_pred HHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCe Q lcl|Aclame:pro 46 SIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPS 125 (406) Q Consensus 46 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~ 125 (406) +.+|+-+..-|..+ ..+++ .....+..+|. .-.....+...+...+..|.+++.+..+. +.+ .+..++|+ T Consensus 81 ~~~A~lv~~e~~~i-~~~d~-~~~~~l~~il~-----~n~f~~~~~~~~e~a~a~G~~~~k~~~d~--~~~-~I~~v~ad 150 (500) T protein:vir:98 81 KKIASLVFNEQAEI-KVDDD-AANEFISETLK-----NDRFNKNFERYLESCLALGGLAMRPYVDG--DKV-RVAFVQAP 150 (500) T ss_pred HHHhhhhcCCcceE-ecCCh-HHHHHHHHHHh-----hccHHHHHHHHHHHHhhcCCEEEEEEEeC--Cce-EEEEEcCC Confidence 44554443323222 11211 11122333332 22345556677777888898888777763 333 35666777 Q ss_pred eEEEEEccCcce------------------EEE---EEeecCCeEE----E-Ec-----------------c---e---- Q lcl|Aclame:pro 126 ETTVEETDNHEI------------------VYT---FTDMLTAKQV----K-CF-----------------A---H---- 155 (406) Q Consensus 126 ~~~~~~~~~g~~------------------~~~---~~~~~~g~~~----~-~~-----------------~---~---- 155 (406) .+.+...+.+++ .|. +....++... . +. + . T Consensus 151 ~~~P~~~d~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~l~~~~~~ 230 (500) T protein:vir:98 151 VFLPLQSNTQDVSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEAKV 230 (500) T ss_pred eeEEEEEcCCCeEEEEEEEEEeeeecCCceEEEEEEEEEEeCCceeEEEEEEEecccccccCcccccccccCCcCcceEe Confidence 766643332221 110 0000011100 0 00 0 0 Q ss_pred ------eeEeeccC---C--CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-----eecCCC-CHHHHHH Q lcl|Aclame:pro 156 ------DVIHWKFF---S--HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILT-----MKGAQL-SGDARQR 218 (406) Q Consensus 156 ------~vih~r~~---~--~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-----~~~~~~-~~e~~~~ 218 (406) -..||+.+ + ...++|+|...-+...++..+..-.....-++.|.. ..++ ...... +.+.... T Consensus 231 ~~~~~p~f~~~~~~~~N~~~~~sp~G~S~~~~~~~lid~lD~~~s~~~~e~~~g~~-~i~v~~~~l~~~~~~~~g~~~~~ 309 (500) T protein:vir:98 231 TDVTRPIFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQR-RVAVPESLTALTVRTTDGDVVPR 309 (500) T ss_pred ccCCCccEEEecCCccccccCCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhCcc-eeeechHHhcccCCCCCccccCC Confidence 12344432 1 124679999999999999888777777777776443 3222 111110 1000000 Q ss_pred HHHH-HHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccch-hHH-------- Q lcl|Aclame:pro 219 ARQE-FEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQ-SVA-------- 288 (406) Q Consensus 219 ~~~~-~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~-n~~-------- 288 (406) ..-. -+..|.+-+. -..++..++.++....+-++.+..+...++|+...|+++..+|..+++. ++. T Consensus 310 ~~~d~~~~~~~~~~~----~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~gls~~~~~~~~~g~~TAtei~s~~~~ 385 (500) T protein:vir:98 310 PRFESDQNVYIRMGG----RDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMKTATEIVSENSD 385 (500) T ss_pred cccCCCcceEEEcCC----CCCcCcceeEeccccChHHHHHHHHHHHHHHHHHhCCCccccccCcCccccHHHHHHHHHH Confidence 0000 0000100000 0123456777877778888999999999999999999999998644321 111 Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHh-hccC--ccchhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHh Q lcl|Aclame:pro 289 -----QLMEDYVTNDLPFYFDAITSELGL-KTLN--DKDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVEL 358 (406) Q Consensus 289 -----~~~~~~~~~~i~P~~~~ie~~l~~-~l~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~ 358 (406) ...+..++.+|.-+++.|-+.... .++. ......+.+.|+ +..|.++.++...+++.+|+|+.-+++..+ T Consensus 386 ~~~t~~~~~~~~~~al~~lv~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~v~aGi~s~~~~i~~~ 465 (500) T protein:vir:98 386 TYQMRNSIVALVEQSLKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMAIQKV 465 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHhc Confidence 122344455555555555543321 1111 111222344553 455677888889999999999999987554 Q ss_pred -CCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCc Q lcl|Aclame:pro 359 -GKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE 398 (406) Q Consensus 359 -g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~ 398 (406) |++ ++...+....... +............+-.|| T Consensus 466 ~g~~---eeea~~~l~~i~~---E~~~~~~~~~~~~~~~g~ 500 (500) T protein:vir:98 466 LNVT---EEKAQEIAAEINT---GIVDEINQQRTDTHLYGE 500 (500) T ss_pred CCCC---HHHHHHHHHHHHH---hccccCCCCCccccccCC Confidence 543 2333222111000 000000000001111122 No 219 >protein:vir:3028 Length: 500 # NCBI annotation: minor capsid protein # Family: family:all:898 # MgeID: mge:61 # MgeName: PhiNIH1.1 # Cross-refs: genbank:acc:NP_438141;genbank:gi:16271804;genbank:GeneID:929241 Probab=95.86 E-value=0.0013 Score=36.33 Aligned_cols=377 Identities=15% Similarity=0.067 Sum_probs=171.6 Q ss_pred CcccccccC------------C--------CCcch----hh---HHHhhcCCccc--cc------chhhhhccHHHHHHH Q lcl|Aclame:pro 1 MSFFQPLGT------------S--------KVSYD----DY---ISSVLAGDVSQ--KY------LGVSALKNSDILTAT 45 (406) Q Consensus 1 M~~f~~~~~------------~--------~~~~~----~~---~~~~~~~~~~~--~~------~~~~a~~~~~v~~~i 45 (406) ||+|.+.+. . ..+.. .. +..+..|.+.. +. .............++ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (500) T protein:vir:30 1 MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAA 80 (500) T ss_pred CchHHHHHHHHHHHHHHhhcchhhhhhccccccCCHHHHHHHHHHHHHhcCCCCCcccccCCCCcccCceeecchHHHHH Confidence 998854221 0 01111 01 11222222110 00 011112222223344 Q ss_pred HHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCe Q lcl|Aclame:pro 46 SIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPS 125 (406) Q Consensus 46 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~ 125 (406) +.+|+-+..-|..+ ..+++ .....+..+|. .-.....+...+...+..|.+++.+..+. +.+ .+..++|+ T Consensus 81 ~~~A~lv~~e~~~i-~~~d~-~~~~~l~~il~-----~n~f~~~~~~~~e~a~a~G~~~~k~~~d~--~~~-~I~~v~ad 150 (500) T protein:vir:30 81 KKIASLVFNEQAEI-KVDDD-AANEFISETLK-----NDRFNKNFERYLESCLALGGLAMRPYVDG--DKV-RVAFVQAP 150 (500) T ss_pred HHHhhhhcCCcceE-ecCCh-HHHHHHHHHHh-----hccHHHHHHHHHHHHhhcCCEEEEEEEeC--Cce-EEEEEcCC Confidence 44554443323222 11211 11122333332 22345556677777888898888777763 333 35666777 Q ss_pred eEEEEEccCcce------------------EEE---EEeecCCeEE----E-Ec-----------------c---e---- Q lcl|Aclame:pro 126 ETTVEETDNHEI------------------VYT---FTDMLTAKQV----K-CF-----------------A---H---- 155 (406) Q Consensus 126 ~~~~~~~~~g~~------------------~~~---~~~~~~g~~~----~-~~-----------------~---~---- 155 (406) .+.+...+.+++ .|. +....++... . +. + . T Consensus 151 ~~~P~~~d~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~l~~~~~~ 230 (500) T protein:vir:30 151 VFLPLQSNTQDVSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEAKV 230 (500) T ss_pred eeEEEEEcCCCeEEEEEEEEEeeeecCCceEEEEEEEEEEeCCceeEEEEEEEecccccccCcccccccccCCcCcceEe Confidence 766643332221 110 0000011100 0 00 0 0 Q ss_pred ------eeEeeccC---C--CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-----eecCCC-CHHHHHH Q lcl|Aclame:pro 156 ------DVIHWKFF---S--HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILT-----MKGAQL-SGDARQR 218 (406) Q Consensus 156 ------~vih~r~~---~--~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-----~~~~~~-~~e~~~~ 218 (406) -..||+.+ + ...++|+|...-+...++..+..-.....-++.|.. ..++ ...... +.+.... T Consensus 231 ~~~~~p~f~~~~~~~~N~~~~~sp~G~S~~~~~~~lid~lD~~~s~~~~e~~~g~~-~i~v~~~~l~~~~~~~~g~~~~~ 309 (500) T protein:vir:30 231 TDVTRPIFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQR-RVAVPESLTALTVRTTDGDVVPR 309 (500) T ss_pred ccCCCccEEEecCCccccccCCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhCcc-eeeechHHhcccCCCCCccccCC Confidence 12344432 1 124679999999999999888777777777776443 3222 111110 1000000 Q ss_pred HHHH-HHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccch-hHH-------- Q lcl|Aclame:pro 219 ARQE-FEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQ-SVA-------- 288 (406) Q Consensus 219 ~~~~-~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~-n~~-------- 288 (406) ..-. -+..|.+-+. -..++..++.++....+-++.+..+...++|+...|+++..+|..+++. ++. T Consensus 310 ~~~d~~~~~~~~~~~----~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~gls~~~~~~~~~g~~TAtei~s~~~~ 385 (500) T protein:vir:30 310 PRFESDQNVYIRMGG----RDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMKTATEIVSENSD 385 (500) T ss_pred cccCCCcceEEEcCC----CCCcCcceeEeccccChHHHHHHHHHHHHHHHHHhCCCccccccCcCccccHHHHHHHHHH Confidence 0000 0000100000 0123456777877778888999999999999999999999998644321 111 Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHh-hccC--ccchhhhhhhhc--ccchhHHHHHHHHHHHhCCCcCHHHHHHHh Q lcl|Aclame:pro 289 -----QLMEDYVTNDLPFYFDAITSELGL-KTLN--DKDRRLYHIEFD--TRSVTGRNVDEIVKLVNNQILTPNQGLVEL 358 (406) Q Consensus 289 -----~~~~~~~~~~i~P~~~~ie~~l~~-~l~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~ 358 (406) ...+..++.+|.-+++.|-+.... .++. ......+.+.|+ +..|.++.++...+++.+|+|+.-+++..+ T Consensus 386 ~~~t~~~~~~~~~~al~~lv~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~v~aGi~s~~~~i~~~ 465 (500) T protein:vir:30 386 TYQMRNSIVALVEQSLKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMAIQKV 465 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHhc Confidence 122344455555555555543321 1111 111222344553 455677888889999999999999987554 Q ss_pred -CCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCc Q lcl|Aclame:pro 359 -GKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE 398 (406) Q Consensus 359 -g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~ 398 (406) |++ ++...+....... +............+-.|| T Consensus 466 ~g~~---eeea~~~l~~i~~---E~~~~~~~~~~~~~~~g~ 500 (500) T protein:vir:30 466 LNVT---EEKAQEIAAEINT---GIVDEINQQRTDTHLYGE 500 (500) T ss_pred CCCC---HHHHHHHHHHHHH---hccccCCCCCccccccCC Confidence 543 2333222111000 000000000001111122 No 220 >protein:vir:94709 Length: 522 # NCBI annotation: head to tail connector # Family: family:all:481 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338118;genbank:gi:77118196;genbank:GeneID:3707732 Probab=94.70 E-value=0.0037 Score=33.90 Aligned_cols=382 Identities=12% Similarity=0.039 Sum_probs=154.7 Q ss_pred Ccc------------cccccCCCCcchhhHHHh---hcCC-----cc-cccchhhhhccHHHHHHHHHHHHhhcc-c--- Q lcl|Aclame:pro 1 MSF------------FQPLGTSKVSYDDYISSV---LAGD-----VS-QKYLGVSALKNSDILTATSIIAGDIAR-F--- 55 (406) Q Consensus 1 M~~------------f~~~~~~~~~~~~~~~~~---~~~~-----~~-~~~~~~~a~~~~~v~~~i~~ia~~ia~-~--- 55 (406) |.- |+.+++.+.++...+.+. +-.+ .. ........ -.++.-.|++.+|..+.+ + T Consensus 1 ~~~~~~~~~~~~~~r~~~l~~~R~~~e~~w~e~~~y~lP~~~~~~~~~~~~~~~~~-~dst~~~a~~~Las~l~~~ltP~ 79 (522) T protein:vir:94 1 MAEREGFAAEGAKAVYDRLKNGRQPYETRAQNCAAVTIPSLFPKESDNSSTEYTTP-WQAVGARCLNNLAAKLMLALFPQ 79 (522) T ss_pred CcccchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccCCCCCccccccccc-ccccHHHHHHHHHHHHHhhcCCC Confidence 542 333444444444332222 1111 00 00001112 234445566666665533 2 Q ss_pred -eeEEEecCC--------cccccchH----HH---HhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCcee--E Q lcl|Aclame:pro 56 -PLVKKDVNG--------DIIHDEDI----NY---LLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQA--L 117 (406) Q Consensus 56 -~~~~~~~~~--------~~~~~~~~----~~---lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~--~ 117 (406) ||.-..... +......+ .. .+. +--..-+.+.-+..+..++.++||++.|+..+.. |.+ . T Consensus 80 ~~WFrl~~~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~-~~~~~snf~~~~~~~~~~L~~~G~a~l~~~~~~~-~~~~~~ 157 (522) T protein:vir:94 80 SPWMRLTVSEYEAKTLSQDSEAAARVDEGLAMVERVLM-AYMETNSFRVPLFEALKQLIVSGNCLLYIPEPEQ-GTYSPM 157 (522) T ss_pred CcccccccchhhhhccCcccchhHHHHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHHHHhhCcEeEeeeccCC-CceeeE Confidence 453332110 01111111 11 111 1112234556667778889999999999876644 333 3 Q ss_pred EEeecCCeeEEEEEccCcceEE----------------------------------EEEeecCCeEEE------------ Q lcl|Aclame:pro 118 QFQFYRPSETTVEETDNHEIVY----------------------------------TFTDMLTAKQVK------------ 151 (406) Q Consensus 118 ~l~~l~p~~~~~~~~~~g~~~~----------------------------------~~~~~~~g~~~~------------ 151 (406) ..+|+. .+.+..+..|++.- .......++... T Consensus 158 ~~~pl~--~y~v~~d~~G~vd~i~r~~~~~~~~l~~~~~~~~~~~~~~p~~~v~v~~~v~~~~~~~~~~~~~~g~~~~~~ 235 (522) T protein:vir:94 158 RMYRLV--SYVVQRDAFGNILQIVTIDKVAFSALPEDVKSQLNADDYEPDTELEVYTHIYRQDDEYLRYEEVEGIEVTGT 235 (522) T ss_pred EEEEcc--eEEEeeCCCcCeEEEeeeeeccHHhcchHHHHHHhcccCCccceEEEEEEEEeeCCceeEEeeccCceeccc Confidence 445553 44444555554311 111111111100 Q ss_pred -----EcceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHH Q lcl|Aclame:pro 152 -----CFAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEK 225 (406) Q Consensus 152 -----~~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~ 225 (406) +..-..+.+|+...+ ..||.||.+-+...+...+.+.+...........|.+++..+....++.. T Consensus 236 ~~~~~~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~~v~~~g~~~~~~~--------- 306 (522) T protein:vir:94 236 DGSYPLTACPYIPVRMVRLDGEDYGRSYCEEYLGDLNSLETITEAITKMAKVASKVVGLVNPNGITQPRRL--------- 306 (522) T ss_pred CCCCccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeecccccccchhe--------- Confidence 000112333333223 48999999999999999999999999988888888877765554443322 Q ss_pred HhcccccCceeec--cCCceeeeccCChhHHHH-HHHHHHHHHHHHHHhcCCHHHhcccccchhHHH--HHH-------- Q lcl|Aclame:pro 226 MREGSVGGSPLVF--DSTMEYTPLEIDTNVLQL-ITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQ--LME-------- 292 (406) Q Consensus 226 ~~~g~~~~~~~vl--~~g~~~~~l~~~~~d~~~-~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~--~~~-------- 292 (406) ..|.+ | .++- ++++...++... .+++. .+..+..+..|..+|-+..... ..+..-+.++ .+. T Consensus 307 -~~~~~-g-~~v~g~~~~v~~~~~~~~-~~~~~~~~~i~~~~~rI~~af~~~~~~~-~~~~r~TAtEV~~r~~E~~~~LG 381 (522) T protein:vir:94 307 -NKAAT-G-EFVAGRVEDINFLQLTKG-QDFTIAKSVADAIEQRLGWAFLLNSAVQ-RNAERVTAEEIRYVAGELEATLG 381 (522) T ss_pred -eccCC-c-eeecCCcccceeeecccc-cchhHHHHHHHHHHHHHHHHHhhhhhcc-CCCccccHHHHHHHHHHHHHHHh Confidence 12222 1 2222 233444444332 33443 3556677778999997663211 1111112221 111 Q ss_pred ----HHHHHHHHHHHHHHHHHHH-hhccCccchhhhhhhhcccchhHHH---HHHHHHHHh----CC------CcCHH-- Q lcl|Aclame:pro 293 ----DYVTNDLPFYFDAITSELG-LKTLNDKDRRLYHIEFDTRSVTGRN---VDEIVKLVN----NQ------ILTPN-- 352 (406) Q Consensus 293 ----~~~~~~i~P~~~~ie~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~g------~~t~N-- 352 (406) .+....+.|++...-..+. ..++++.....+.+++...-....+ ++.+...++ -+ -+..+ T Consensus 382 ~v~~rl~~E~l~Pli~r~~~il~r~g~lP~~p~~~v~v~~~s~La~~qr~~~~~~l~~~~~~ia~l~P~~~~~~id~d~~ 461 (522) T protein:vir:94 382 GVYSVQSQELQLPIVRVLMNQLQSAGMIPDLPKEAVEPTVSTGLEALGRGQDLEKLTQAVNMMTGLQPLSQDPDINLPTL 461 (522) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccEEeeEecHHHHHHHHHHHHHHHHHHHHHHhccchhhhhcCCHHHH Confidence 2334444555444333332 2234433333333443221000011 111111111 10 11222 Q ss_pred --HHHHHhCCCCCCCCCCCeeeeccCccchhhcc--cccccc------Ccc-cCCCccCCCCCCC Q lcl|Aclame:pro 353 --QGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE--EYQDKV------GIK-GKGGEVNAEEDKS 406 (406) Q Consensus 353 --E~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~--~~~~~~------~~~-~~gg~~~~~~~~~ 406 (406) ++.+.+|.||.. .+..+.-...+-... ..+.+. +.. ...+....++-.+ T Consensus 462 ~~~~a~~~Gv~~~~-----ivr~~ee~~~~~~q~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 521 (522) T protein:vir:94 462 KLRLLNALGIDTAG-----LLLTQDEKIQRMAEQSSQQAVVQGASAAGANMGAAVGQGAGEDMAQ 521 (522) T ss_pred HHHHHHHcCCChhh-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccchhhhc Confidence 233445554420 011111010000000 000000 000 1111112222122 No 221 >protein:vir:97265 Length: 513 # NCBI annotation: hypothetical protein ORF013 # Family: family:all:584 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294521;genbank:gi:149408242;genbank:GeneID:5237130 Probab=93.74 E-value=0.0065 Score=32.56 Aligned_cols=383 Identities=13% Similarity=0.067 Sum_probs=145.5 Q ss_pred CcccccccCCCCc--ch------hhHHHhhcCCcc-----cccchh--------------hhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MSFFQPLGTSKVS--YD------DYISSVLAGDVS-----QKYLGV--------------SALKNSDILTATSIIAGDIA 53 (406) Q Consensus 1 M~~f~~~~~~~~~--~~------~~~~~~~~~~~~-----~~~~~~--------------~a~~~~~v~~~i~~ia~~ia 53 (406) |.==++..-+... +. ..+...+.|... ..+.+. .|.-.+.+...++.++..+- T Consensus 1 m~~~~~~~v~~~h~~y~a~~~~W~~ird~~~G~~~~r~~g~~YLPk~~~E~~~~Y~~rl~rA~~~n~~~~tl~~l~G~vf 80 (513) T protein:vir:97 1 MADKDPKSPATTSGAYDQMLPRWHVIETLLGGTEAMREAGETYLPRHQEETDKGYQERLASAVLLNMVEQTLDTLSGKPF 80 (513) T ss_pred CCCCCCCCCCcCCHHHHHHHHHHHHHHHHhcChHHHHhhcccCCCCCCCCCHHHHHHHHhcccCCChHHHHHHHHhhhhh Confidence 2211111100000 00 113333333311 111110 01223334445555555555 Q ss_pred cceeEEEecCCcccccchHHHHhhhhcc-ccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc-----------------e Q lcl|Aclame:pro 54 RFPLVKKDVNGDIIHDEDINYLLNVKST-SNASARTWKFAMAVNAILTGNSFSRILRDPKTN-----------------Q 115 (406) Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~lL~~~Pn-~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g-----------------~ 115 (406) +-|..+. ......+...|..+-. ...+-.+|.+.++...+.+|-+++++.....++ + T Consensus 81 ~k~p~~~-----~~~p~~~~~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~~~~~~~T~Ade~~~~~r 155 (513) T protein:vir:97 81 SEPIKLN-----EDVPKAIEETILPDVDLQGNNLDVFARQWFREGMAKALCHVLIDMPRPAPREDGQPRTLADDRREGLR 155 (513) T ss_pred hcCcccC-----cCchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEecCCCCCccchhHHhHHHHHhhccC Confidence 4444331 1122334433322333 456678999999999999999999887654332 1 Q ss_pred eEEEeecCCeeEEE--------------------EEccCc--ceEE-EEEeecCCeEEEEcc------------------ Q lcl|Aclame:pro 116 ALQFQFYRPSETTV--------------------EETDNH--EIVY-TFTDMLTAKQVKCFA------------------ 154 (406) Q Consensus 116 ~~~l~~l~p~~~~~--------------------~~~~~g--~~~~-~~~~~~~g~~~~~~~------------------ 154 (406) |. +..+.|..+.- ..+.+| ...+ .|..-..|....+.. T Consensus 156 Py-~~~~~~e~IinW~~~~v~G~~~L~~v~l~E~~~~~Dgf~~~~~~q~rvL~~g~~~v~r~~~~~~~~~~e~~~~~~g~ 234 (513) T protein:vir:97 156 PY-WVMIKPECLLFARSEVINGVEVLQHVRIIEHYMEQDGFAEVCKRRIRVLEPGLVQLWEPVKKSNAQKEEWALADEWA 234 (513) T ss_pred ce-EEEecHhhhcCcceeccCcceeeeeEEEEEEEeecCCCcceEEEEEEEEeCceEEEEEeecCCCccccceEEecCCC Confidence 32 22222222210 111121 1111 011111111111000 Q ss_pred -----eeeEeeccCCCCCccccCHHHHHHHH-HHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 155 -----HDVIHWKFFSHDTILGRSPLLSLGDE-IDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMRE 228 (406) Q Consensus 155 -----~~vih~r~~~~~~~~G~s~~~~~~~~-i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 228 (406) =.++.+-....+...|.+|+..++.. +........+... +...+.|-.++..- +++.. +...- T Consensus 235 ~~l~~IP~v~~~~~~~~~~~~~pPLl~LA~ln~~hy~~~Sd~~~i-l~~~~~P~l~~~G~---~~~~~-------~~i~i 303 (513) T protein:vir:97 235 TGLNYVPLVTFYADRQGFMMGKPPLLDLAHLNVAHWQSASDQRHI-LTVSRFPILACSGA---SGEDS-------DPVVV 303 (513) T ss_pred CcCCceeEEEEecCCCCCCCCccchHHHHHHHHHHHhhhhhHHHH-HHhcccceeeeecC---CcCCC-------CceEe Confidence 00111111112234577777655544 4455444444444 44445565555421 11110 01234 Q ss_pred ccccCceeeccC-C--ceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHH--HHHHHHHHHHHHH Q lcl|Aclame:pro 229 GSVGGSPLVFDS-T--MEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQL--MEDYVTNDLPFYF 303 (406) Q Consensus 229 g~~~~~~~vl~~-g--~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~--~~~~~~~~i~P~~ 303 (406) |.+ .++.+++ | .+|.+.+-+.-... .+..+....++ ...|. .+|.......+.++. ...=.+..|.-++ T Consensus 304 G~~--~~~~lpe~~~~~~yie~~g~~i~~~-~~~l~~le~qm-~~~Ga--~ll~~~~~~~Ta~a~~~~~~~~~S~L~~~a 377 (513) T protein:vir:97 304 GPN--KVLYNPDPAGRFYYVEHTGQAIAAG-RTDLKDLEEQM-AGYGA--EFLKRKTGGQTATARALDSAEATSDLSAMT 377 (513) T ss_pred ecc--ccccCCCCCCcceeeccCchhHHHH-HHHHHHHHHHH-HHHHH--HhhccCCccccHHHHHHHHHHHHHHHHHHH Confidence 543 3566664 4 45555554432222 12222222223 22222 223221111222222 2233455677788 Q ss_pred HHHHHHHHhhccCc------c--ch-hhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhC---C-CCCCCCC--- Q lcl|Aclame:pro 304 DAITSELGLKTLND------K--DR-RLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELG---K-QKSTDPN--- 367 (406) Q Consensus 304 ~~ie~~l~~~l~~~------~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g---~-~p~~~~~--- 367 (406) .++|+.+++.|-.. . +. ..+.-+|.........++++.++++.|.+|....++.+- . +|-..+. T Consensus 378 ~~le~al~~~l~~~a~wlg~~~~~~~v~in~dF~~~~~~~~~~~al~~a~~~G~is~~t~~~~L~r~gvl~~d~d~~~~~ 457 (513) T protein:vir:97 378 GLFEDALAQALDITADWLRLGPNGGTVELVKDYDLEEMDAPGLQALQVAREKRDISRKTYLNGLRLRGVLPEDFDEDEDW 457 (513) T ss_pred HHHHHHHHHHHHHHHHHhCCCCCccEEEeccccCcccCCHHHHHHHHHHHhCCCCCHHHHHHHHHhccCCCccCCHHHHH Confidence 88888888755211 1 11 123344544444556677788888888888766655542 1 1110000 Q ss_pred ---CCe----------eeeccCccchhhcc---ccccccCcccCCCcc-CCCCCCC Q lcl|Aclame:pro 368 ---MDR----------YQSSLNYVFLDKKE---EYQDKVGIKGKGGEV-NAEEDKS 406 (406) Q Consensus 368 ---gd~----------~~~~~n~~~~~~~~---~~~~~~~~~~~gg~~-~~~~~~~ 406 (406) .++ -..+.+-.|-+... +.+....+..++|+. -+..++| T Consensus 458 e~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (513) T protein:vir:97 458 EELMEEISEAMGRAGLDLDPAQKNPPEGGEGEGEGEGEGGEGGEGGEGGGNPGGES 513 (513) T ss_pred HHHHHhhhhccCCCCccccccCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCC Confidence 000 01111111110000 000000000011110 1111122 No 222 >protein:vir:1538 Length: 535 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052106;swissprot:trembl:q9t110;genbank:gi:9634032;uniprot:Q9T110;genbank:GeneID:1262384 Probab=93.32 E-value=0.008 Score=32.09 Aligned_cols=384 Identities=11% Similarity=0.033 Sum_probs=154.1 Q ss_pred Ccc--------------cccccCCCCcchhhHHHhh--------cCCcccccchhhhhccHHHHHHHHHHHHhhcc-c-- Q lcl|Aclame:pro 1 MSF--------------FQPLGTSKVSYDDYISSVL--------AGDVSQKYLGVSALKNSDILTATSIIAGDIAR-F-- 55 (406) Q Consensus 1 M~~--------------f~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~-~-- 55 (406) |.= |..+++.+.++...+.+.. .......-....-.-.++.-.|++.+|..+.+ + T Consensus 1 m~~~~~~~~~~~~~k~r~~~l~~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~~~~dst~~~a~~~Laa~l~~~ltP 80 (535) T protein:vir:15 1 MADSKRTGLGEDGAKATYDRLTNDRRAYETRAENCAQYTIPSLFPKESDNESTDYTTPWQAVGARGLNNLASKLMLALFP 80 (535) T ss_pred CCccchhccchHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccCCCCCcccccccccccccHHHHHHHHHHHHHHhhcC Confidence 432 2233333444443322221 11100000000011244445666666665433 2 Q ss_pred --eeEEEecCC--------ccc----ccchH---HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEE Q lcl|Aclame:pro 56 --PLVKKDVNG--------DII----HDEDI---NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQ 118 (406) Q Consensus 56 --~~~~~~~~~--------~~~----~~~~~---~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~ 118 (406) ||.-..... ... ....+ .+.+... -..-+.+.-+..+..+++++||+..|+..+..++.+.. T Consensus 81 ~~~WF~l~~~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~~~-l~~snf~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~f~ 159 (535) T protein:vir:15 81 MQSWMKLTISEYEAKQLVGDPDGLAKVDEGLSMVERIIMNY-IESNSYRVTLFECLKQLIVAGNALLYLPEPEGSYNPMK 159 (535) T ss_pred CCcccccccChHHHhccCCCcchHHHHHHHHHHHHHHHHHH-HHhcCcHHHHHHHHHHHHhhCceeEEeecCCCCceeeE Confidence 443332211 000 11111 1112111 12244566677778899999999999877654444445 Q ss_pred EeecCCeeEEEEEccCcceE------------------------------------EEEE-e-ecCCeEEEE-------- Q lcl|Aclame:pro 119 FQFYRPSETTVEETDNHEIV------------------------------------YTFT-D-MLTAKQVKC-------- 152 (406) Q Consensus 119 l~~l~p~~~~~~~~~~g~~~------------------------------------~~~~-~-~~~g~~~~~-------- 152 (406) .+|+. .+.+..+..|++. |... . ..++....+ T Consensus 160 ~~pl~--~~~v~~d~~G~vd~i~r~~~~t~~~l~~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~e~~g~~~ 237 (535) T protein:vir:15 160 LYRLS--SYVVQRDAYGNVLQIVTRDQIAFGALPEDVRSAVEKAGGEKKMDEMVDVYTHVYLDEESGDYLKYEEVEDVEI 237 (535) T ss_pred EEEcC--eeEEeeCCCCCeeEEEEeEeecHHHHHHHHhHhhhccccccCCCCceeEEEEEEEecCCCcEEEEEEeeCccc Confidence 55553 3333344333221 1111 0 111111100 Q ss_pred ---------cceeeEeeccCCC-CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHH Q lcl|Aclame:pro 153 ---------FAHDVIHWKFFSH-DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQE 222 (406) Q Consensus 153 ---------~~~~vih~r~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~ 222 (406) ..-..+..|+... ...||.||.+-+...+...+.+.+...........|.+++.......+.+. T Consensus 238 ~~~~~~~~~~~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~lv~~~g~~~~~~l------ 311 (535) T protein:vir:15 238 DGSDATYPTDAMPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNPAGITQPRRL------ 311 (535) T ss_pred cccccccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeecccccccchhc------ Confidence 0011233333322 348999999999999999999999999988888888877665444432221 Q ss_pred HHHHhcccccCceee--ccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHH--H------- Q lcl|Aclame:pro 223 FEKMREGSVGGSPLV--FDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQL--M------- 291 (406) Q Consensus 223 ~~~~~~g~~~~~~~v--l~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~--~------- 291 (406) ..|.+ +.++ -.+++...++...++-.-..+..+..+..|..+|-+.. +....+..-+.+|- + T Consensus 312 ----~~~~~--g~~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~~I~~af~~~~-~~~~~~~r~TAtEV~~r~~E~~~~ 384 (535) T protein:vir:15 312 ----TKAQT--GDFVPGRREDIDFLQLEKQADFTVAKAVSDQIEARLSYAFMLNS-AVQRTGERVTAEEIRYVASELEDT 384 (535) T ss_pred ----ccCCc--eeeecCCcccceeeecccccchhHHHHHHHHHHHHHHHHHhhhh-cccCCCccccHHHHHHHHHHHHHH Confidence 12221 1222 23444555554443322233556677788988885542 21111111122221 1 Q ss_pred -----HHHHHHHHHHHHHHHHHHHHh-hccCccchhhhhhhhcccchhHHHHH-------HHHHHHhCC------CcCHH Q lcl|Aclame:pro 292 -----EDYVTNDLPFYFDAITSELGL-KTLNDKDRRLYHIEFDTRSVTGRNVD-------EIVKLVNNQ------ILTPN 352 (406) Q Consensus 292 -----~~~~~~~i~P~~~~ie~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g------~~t~N 352 (406) ..+....+.|++...-..+.+ .++++.....+.+++...-....+.. .+..+.+.+ .+..+ T Consensus 385 LG~v~~rl~~Ell~Pli~r~~~il~r~g~lP~~p~~~v~~~yis~La~aqr~~~~~~l~~~~~~la~~~P~~ld~~id~d 464 (535) T protein:vir:15 385 LGGVYSILSQELQLPLVRVLLKQLQATSQIPELPKEAVEPTISTGLEAIGRGQDLDKLERCISAWAALAPMQGDPDINLA 464 (535) T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccceeEEEecHHHHHHHHHHHHHHHHHHHHHHhcChhhhhccCCHH Confidence 134445555555554444433 24443333334444432111001111 111111110 12222 Q ss_pred ----HHHHHhCCCCCCCCCCCeeeeccCcc-chhhc-ccc-ccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 353 ----QGLVELGKQKSTDPNMDRYQSSLNYV-FLDKK-EEY-QDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 353 ----E~R~~~g~~p~~~~~gd~~~~~~n~~-~~~~~-~~~-~~~~~~~~~gg~~~~~~~~~ 406 (406) ++.+.+|.|+.. ++-+..-+ -+-.. ... +.......-|+.....--+| T Consensus 465 ~~~~~~a~~~Gvp~~~------i~~~~eev~~~~~q~~~~~~~~~~a~~~g~~~~~~~~~~ 519 (535) T protein:vir:15 465 VIKLRIANAIGIDTSG------ILLTDEQKQALMMQDAAQTGIENAAATGGAGVGALATSS 519 (535) T ss_pred HHHHHHHHHcCCChhh------hcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhccC Confidence 233444555420 01010000 00000 000 00000001111111111122 No 223 >protein:vir:3361 Length: 535 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523332;genbank:gi:17570823;genbank:GeneID:927409 Probab=92.88 E-value=0.0096 Score=31.64 Aligned_cols=385 Identities=10% Similarity=0.020 Sum_probs=154.1 Q ss_pred Ccc--------------cccccCCCCcchhhHHHhhc--------CCcccccchhhhhccHHHHHHHHHHHHhhccc--- Q lcl|Aclame:pro 1 MSF--------------FQPLGTSKVSYDDYISSVLA--------GDVSQKYLGVSALKNSDILTATSIIAGDIARF--- 55 (406) Q Consensus 1 M~~--------------f~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~--- 55 (406) |.= |..+++.+.++...+.+... ......-....-.-.++.-.|++.+|..+.+. T Consensus 1 m~~~~~~~~~~~~~~~r~~~l~~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~~~~dst~~~a~~~Laa~l~~~ltP 80 (535) T protein:vir:33 1 MADSKRTGLGEDGAKATYDRLTNDRRAYETRAENCAQYTIPSLFPKESDNESTDYTTPWQAVGARGLNNLASKLMLALFP 80 (535) T ss_pred CChhhhhccChhHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccCCCCCcccccccccccccHHHHHHHHHHHHHHhhcC Confidence 432 22333333444433222211 10000000000012344456666666655332 Q ss_pred --eeEEEecCC--------ccc----ccchH---HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEE Q lcl|Aclame:pro 56 --PLVKKDVNG--------DII----HDEDI---NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQ 118 (406) Q Consensus 56 --~~~~~~~~~--------~~~----~~~~~---~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~ 118 (406) ||.-..... ... ....+ .+.+.. --..-+.+.-+..+..+++++||+..++..+..++.... T Consensus 81 ~~~WF~l~~~d~~~~~~~~~~~~~~~v~~~l~~ve~~~~~-~~~~snf~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~f~ 159 (535) T protein:vir:33 81 MQSWMKLTISEYEAKQLVGDPDGLAKVDEGLSMVERIIMN-YIESNSYRVTLFECLKQLIVAGNALLYLPEPEGSYNPMK 159 (535) T ss_pred CCcccccccChHHHhccccCcchHHHHHHHHHHHHHHHHH-HHHhcCcHHHHHHHHHHHHhhCceeEEeecCCCCceeeE Confidence 443322111 000 11111 111211 112234556667778899999999999887654443444 Q ss_pred EeecCCeeEEEEEccCcceEE-------------------------------------EEEee-cCCeEEEE-------- Q lcl|Aclame:pro 119 FQFYRPSETTVEETDNHEIVY-------------------------------------TFTDM-LTAKQVKC-------- 152 (406) Q Consensus 119 l~~l~p~~~~~~~~~~g~~~~-------------------------------------~~~~~-~~g~~~~~-------- 152 (406) .+|+. .+.+..+..|++.. .+... .++....+ T Consensus 160 ~~pl~--~~~v~~d~~G~vd~i~r~~~~t~~ql~~~~~~~~~~~~~~k~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~ 237 (535) T protein:vir:33 160 LYRLS--SYVVQRDAYGNVLQIVTRDQIAFGALPEDVRSAVEKSGGEKKMDEMVDVYTHVYLDEESGDYLKYEEVEDVEI 237 (535) T ss_pred EEEcC--eeEEeeCCCCCeeEEEeeEeecHHHHHHHhhhhhcccccccccccCCeEEEEEEeeCCCCcEEEEEEEeCccc Confidence 45543 34444444443211 11111 11111111 Q ss_pred ---------cceeeEeeccCCC-CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHH Q lcl|Aclame:pro 153 ---------FAHDVIHWKFFSH-DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQE 222 (406) Q Consensus 153 ---------~~~~vih~r~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~ 222 (406) ..-..+..|+... ...||.||.+-+...+...+.+.+...........|.+++.......+.+. T Consensus 238 ~~~~~~~~~~~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~lv~~~g~~~~~~~------ 311 (535) T protein:vir:33 238 DGSDATYPTDAMPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNPAGITQPRRL------ 311 (535) T ss_pred cccccccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccccchhhc------ Confidence 0011233333322 348999999999999999999999999988888888877665544432221 Q ss_pred HHHHhcccccCceee--ccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHH--H------- Q lcl|Aclame:pro 223 FEKMREGSVGGSPLV--FDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQL--M------- 291 (406) Q Consensus 223 ~~~~~~g~~~~~~~v--l~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~--~------- 291 (406) ..|.+ +.++ -.+++...++...++-.-..+..+..+..|..+|-+.. +....+..-+.++- + T Consensus 312 ----~~~~~--g~~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~~I~~af~~~~-~~~~~~~r~TAtEV~~r~~E~~~~ 384 (535) T protein:vir:33 312 ----TKAQT--GDFVPGRREDIDFLQLEKQADFTVAKAVSDQIEARLSYAFMLNS-AVQRTGERVTAEEIRYVASELEDT 384 (535) T ss_pred ----ccCCc--eeeecCCcccceeeecccccchhHHHHHHHHHHHHHHHHHhhhh-cccCCCccccHHHHHHHHHHHHHH Confidence 12221 1222 23444555554443322233556677788988885542 21111111122221 1 Q ss_pred -----HHHHHHHHHHHHHHHHHHHHh-hccCccchhhhhhhhcccchhHHHHH-------HHHHHHhCC------CcCHH Q lcl|Aclame:pro 292 -----EDYVTNDLPFYFDAITSELGL-KTLNDKDRRLYHIEFDTRSVTGRNVD-------EIVKLVNNQ------ILTPN 352 (406) Q Consensus 292 -----~~~~~~~i~P~~~~ie~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g------~~t~N 352 (406) ..+....+.|++...-..+.+ .++++.....+.+++...-....+.. .+..+.+.+ .+..+ T Consensus 385 LG~v~~rl~~Ell~Pli~r~~~il~r~g~lP~~p~~~v~~~yis~La~aqr~~~~~~l~~~~~~la~~~P~~~d~~id~d 464 (535) T protein:vir:33 385 LGGVYSILSQELQLPLVRVLLKQLQATSQIPELPKEAVEPTISTGLEAIGRGQDLDKLERCISAWAALAPMQGDPDINLA 464 (535) T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccceeEEEecHHHHHHHHHHHHHHHHHHHHHHhhChhhhhccCCHH Confidence 134444555555554444433 24443333334444432111001111 111111110 12222 Q ss_pred ----HHHHHhCCCCCCCCCCCeeeeccCccchhhcc-c-cccccCcccCCCc-----cCCCCCCC Q lcl|Aclame:pro 353 ----QGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE-E-YQDKVGIKGKGGE-----VNAEEDKS 406 (406) Q Consensus 353 ----E~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~-~-~~~~~~~~~~gg~-----~~~~~~~~ 406 (406) ++.+.+|.|+.. .+..+.....+-... . .+.......-|+. ..+.++.. T Consensus 465 ~~~~~~a~~~Gvp~~~-----i~~~~ee~~~~~~q~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 524 (535) T protein:vir:33 465 VIKLRIANAIGIDTSG-----ILLTDEQKQALMMQDAAQTGVENAAAAGGAGVGALATSSPEAMQ 524 (535) T ss_pred HHHHHHHHHcCCCHhH-----hcCCHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhcCChhHH Confidence 233444555320 011110000000000 0 0000000000111 11111111 No 224 >protein:vir:106999 Length: 564 # NCBI annotation: portal vertex protein gp20 # Family: family:all:1036 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195138;genbank:gi:58532915;interpro:IPR010823;uniprot:Q5GQN4;genbank:GeneID:3260496 Probab=92.75 E-value=0.01 Score=31.52 Aligned_cols=398 Identities=13% Similarity=0.071 Sum_probs=169.2 Q ss_pred Cc-cc----ccc-cCCC---Ccch--hhHHHhhcCCcccccch----------------hhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MS-FF----QPL-GTSK---VSYD--DYISSVLAGDVSQKYLG----------------VSALKNSDILTATSIIAGDIA 53 (406) Q Consensus 1 M~-~f----~~~-~~~~---~~~~--~~~~~~~~~~~~~~~~~----------------~~a~~~~~v~~~i~~ia~~ia 53 (406) |+ +| +.. +.+. .+.. +......+|..+.++.- +..+.+|.|.+||+.|.+.+. T Consensus 1 m~~lfgf~i~~~~~~~~~S~vpp~~~~~~~~i~~g~~g~~v~~~g~~~~~n~~eLI~~YR~ma~~pEVd~Av~eIVneaI 80 (564) T protein:vir:10 1 MSQLFGFLINEKEGQKGQSPVPPNDEASVSTVAGGYFGTYVDTSGGQNSRNEYELIRRYRDMSLHPEVDSAIDEIVNEFV 80 (564) T ss_pred CcchhcceeeeeccCCCCCcccCCcCCChhhhhccccceeeecccccchhhHHHHHHHHHHHhhccchhhHHHHhhccee Confidence 76 33 211 1111 1111 11222222221111111 124678999999999998865 Q ss_pred cc-----eeEEEecCCcc------cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC--ceeEEEe Q lcl|Aclame:pro 54 RF-----PLVKKDVNGDI------IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKT--NQALQFQ 120 (406) Q Consensus 54 ~~-----~~~~~~~~~~~------~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~--g~~~~l~ 120 (406) -+ |+.+.-.+.+. .......++|+ =-+-...+ ..++..|.+.|..|..++.|... .-+.+|. T Consensus 81 v~d~~~~pV~vdL~~~~~s~siK~kI~eEF~~Il~-ll~F~~~~----~e~fR~WYVDgRi~fHkiid~~~pk~GI~eLr 155 (564) T protein:vir:10 81 VNDGDDKPVEVDLQNLEIGSGVKKKIRDEFNRILR-MMNFNVNA----HEIIRNWYVDGRSHYHKVIDLDNPKKGILELR 155 (564) T ss_pred EecCCCceEEEEecccCcchHHHHHHHHHHHHHHH-Hhccchhh----hHHHhhhhhcceEEEEEEeeCCChhhhhhhhh Confidence 43 33332211110 01123344443 12333333 34566777889999887765433 2388999 Q ss_pred ecCCeeEEEEEcc------Ccce---------------EEEEEeec----------------CCeEEEEcceeeEeecc- Q lcl|Aclame:pro 121 FYRPSETTVEETD------NHEI---------------VYTFTDML----------------TAKQVKCFAHDVIHWKF- 162 (406) Q Consensus 121 ~l~p~~~~~~~~~------~g~~---------------~~~~~~~~----------------~g~~~~~~~~~vih~r~- 162 (406) .|+|..++.++.. .+.. -|+.+.+. .+...+++.+.|.|... T Consensus 156 ~lDPr~i~~vr~i~~~~~~~~~~v~k~~~~~~~y~~~~Eyy~Ynp~~~~g~~~~~~~~~~~~~~~~ikI~~daI~y~hSG 235 (564) T protein:vir:10 156 YIDSLKIRKVRQKLKDVDPNRKEIEKGTALQYDYGDFIEYYIYNPKGFAGNIPMVTGSMDWSNQEGIKIASDAIAQSTSG 235 (564) T ss_pred hhcccceeeeeeeccccccccceeeeeeeeeccccccccceeeccccccCcccccccccccccccceeechhhcceeccc Confidence 9999987765411 1110 01111100 11235666666666542 Q ss_pred -CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHh---------ccc- Q lcl|Aclame:pro 163 -FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMR---------EGS- 230 (406) Q Consensus 163 -~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~---------~g~- 230 (406) ...++-.-+|-+..|...+....-+.....-+-=..++-+-++ .-.+.+-+...++....+-..+ +|. T Consensus 236 L~d~~~~~i~gyLhkAIKp~NQLkmlEDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev 315 (564) T protein:vir:10 236 LMDLNKKMTLSFLHKAIKSLNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKVKAEQYLRDVMSRYRNKLVYDGQTGEI 315 (564) T ss_pred ceeCCCCceeccchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCcee Confidence 2333334466677777776666666555544432333333333 3334444434444333333322 221 Q ss_pred --ccCceeec----------cCCceeeeccC--ChhHHHHHHHHHHHHHHHHHHhcCCHHHhccccc----chhHHH-HH Q lcl|Aclame:pro 231 --VGGSPLVF----------DSTMEYTPLEI--DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSP----NQSVAQ-LM 291 (406) Q Consensus 231 --~~~~~~vl----------~~g~~~~~l~~--~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~----~~n~~~-~~ 291 (406) +......| ..|.+++.|.- +..+|+ -.++..+.+.++++||.+-|...+. +...|= .. T Consensus 316 rddrk~msMlEDyWLPRReGgrgTEItTLpGgqnLgem~---DV~YF~kKLY~aLnVP~SRl~~e~~~f~~Gr~~EItRD 392 (564) T protein:vir:10 316 RDDKKHMSMLEDFWLPRREGGRGTEITTLPGGQNLGELK---DVEYFKKKLYNSLNLPPSRLTDDNKAFNLGKSTEILRD 392 (564) T ss_pred cccchhhhhHhhhcccccCCCcccceeeccccCCcchHH---HHHHHHHHHHHHhCCCcccccCCCceeecccccchhHH Confidence 11112222 24677777753 333443 4456778899999999999975432 111111 11 Q ss_pred HHHHHHHHHHHHHH----HHHHHHhhccC-----ccchh----hhhhhhcccc---------hhHHHHHHHHHH------ Q lcl|Aclame:pro 292 EDYVTNDLPFYFDA----ITSELGLKTLN-----DKDRR----LYHIEFDTRS---------VTGRNVDEIVKL------ 343 (406) Q Consensus 292 ~~~~~~~i~P~~~~----ie~~l~~~l~~-----~~~~~----~~~~~~~~~~---------~~~~~~~~~~~~------ 343 (406) +.=++..|.-+-.. +.+-|...|+. ..++. .+.++|..+. .+..|+..+..+ T Consensus 393 EiKF~KFI~RLR~rFs~lF~~~Lk~qLiLKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGk 472 (564) T protein:vir:10 393 ELKFTKFIGRLRKRFAQLFHDILKTQLILKGIITPEDWDDMEEHIQYDFLFDNHFNELKEQEMQLQRVNLATQMDPFVGK 472 (564) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcc Confidence 12223334344444 44444444432 23332 2233332211 223344443322 Q ss_pred ------HhCCC--cCHHHHHHH-----------hCCCCCCCCCCCeeeecc-CccchhhccccccccCcccC--C----- Q lcl|Aclame:pro 344 ------VNNQI--LTPNQGLVE-----------LGKQKSTDPNMDRYQSSL-NYVFLDKKEEYQDKVGIKGK--G----- 396 (406) Q Consensus 344 ------~~~g~--~t~NE~R~~-----------~g~~p~~~~~gd~~~~~~-n~~~~~~~~~~~~~~~~~~~--g----- 396 (406) +..-+ +|-+|+-++ +..+|...+.||..-++. .+.|.+.............+ + T Consensus 473 y~S~dyi~k~ILr~tDeei~~~~kqI~~E~k~~~~~~P~e~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~a~~~ 552 (564) T protein:vir:10 473 YFSTEYIRRKILMQTENEFKEIDKQMKSDIESGLAIDPIQVNMLDDMEKQNQAFAPELQAAQDDLAAEREIKKLNSAPKP 552 (564) T ss_pred ccchHHHHHHHhccCHHHHHHHHHHHHHHhhcCCCCCchhhhcCCCccCCCCcCCcchhhhccccccccChhhhccCCCC Confidence 11111 233332211 123454444554333222 33444332211100000000 0 Q ss_pred -CccCCCCCCC Q lcl|Aclame:pro 397 -GEVNAEEDKS 406 (406) Q Consensus 397 -g~~~~~~~~~ 406 (406) --.+++++.+ T Consensus 553 ~~~~~~~~~~~ 563 (564) T protein:vir:10 553 PPSQQSKSQSN 563 (564) T ss_pred CCCCCCcCcCC Confidence 0112233333 No 225 >protein:vir:8883 Length: 543 # NCBI annotation: head-tail connector protein # Family: family:all:481 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813772;genbank:gi:29366727;genbank:GeneID:1258836 Probab=91.66 E-value=0.015 Score=30.61 Aligned_cols=385 Identities=11% Similarity=0.088 Sum_probs=151.4 Q ss_pred Cccc--------------ccccCCCCcchhhHHHh---hcCC--cccccchhhh---hccHHHHHHHHHHHHhhcc-c-- Q lcl|Aclame:pro 1 MSFF--------------QPLGTSKVSYDDYISSV---LAGD--VSQKYLGVSA---LKNSDILTATSIIAGDIAR-F-- 55 (406) Q Consensus 1 M~~f--------------~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~a---~~~~~v~~~i~~ia~~ia~-~-- 55 (406) |.=- +.++..+.++...+.+. +-.+ ........+. .-.++.-.|++.+|..+.+ + T Consensus 1 ~~~~~~~~~~~~~~~~r~~~l~~~R~~~e~~w~e~~~y~lP~~~~~~~~~~~~~~~~~~dst~~~a~~~Laa~l~~~ltP 80 (543) T protein:vir:88 1 MAETKREGLAEEGAKAVYERLKNDRVPYETRAENCAKVTIPSLFPKDSDNSSTDYTTPWQAVGARGLNNLSAKVMLALFP 80 (543) T ss_pred CcccccCcchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhccccCCCCCCcccccccccccchHHHHHHHHHHHHHHhhcC Confidence 5432 22233334443332222 1111 0000001111 2344455666666665533 2 Q ss_pred --eeEEEecCCc--------c----cccchHH---HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc---e Q lcl|Aclame:pro 56 --PLVKKDVNGD--------I----IHDEDIN---YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN---Q 115 (406) Q Consensus 56 --~~~~~~~~~~--------~----~~~~~~~---~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g---~ 115 (406) ||.-...... . .....+. +.+. .--..-+.+.-+..+..++..+||+..|+..+...+ . T Consensus 81 ~~~WF~l~~~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~-~~~~~snf~~~~~~~~~~L~~~G~a~ly~~~~~~~~~~~~ 159 (543) T protein:vir:88 81 LQSWMKLKVSEWQAKQLVSDPSQLAVVEQGLGMVERILM-SYMEANSYRVTLFELIRQLALAGTALIYLPPPDASSNSYN 159 (543) T ss_pred CCcccccccChHHHhcccCChhhHHHHHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHHHHhhCceeeeeccCccccceec Confidence 4433222110 0 0111111 1121 111223455666677888999999999887654322 2 Q ss_pred eEEEeecCCeeEEEEEccCcce-----------------------------------EEEEEee-cCC-----------e Q lcl|Aclame:pro 116 ALQFQFYRPSETTVEETDNHEI-----------------------------------VYTFTDM-LTA-----------K 148 (406) Q Consensus 116 ~~~l~~l~p~~~~~~~~~~g~~-----------------------------------~~~~~~~-~~g-----------~ 148 (406) +...||+. ...+..+..|++ +|..... ..+ . T Consensus 160 ~~~~~pl~--~y~v~~d~~G~v~~i~r~~~~~~~~l~~~~~~~v~~~~~~~p~~~~~v~~~V~pr~~~~~~~~~~~~~~~ 237 (543) T protein:vir:88 160 PMKLYTLH--NHVVQRDAFGNVLQIVTLDKVAYAALPEDVRNSLSGGQEYKPEQELEVYTHIYIDDESGDFLSYQEIEGV 237 (543) T ss_pred ceEEeEcc--eEEEeeCCCCCeeeeeeeeeccHHHHhHHhhHHHHHHhhcCCccceEEEEEEEeecCCCcccccccccCe Confidence 23345542 223333333322 1111111 111 1 Q ss_pred EEEE-------cceeeEeeccCCC-CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHH Q lcl|Aclame:pro 149 QVKC-------FAHDVIHWKFFSH-DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRAR 220 (406) Q Consensus 149 ~~~~-------~~~~vih~r~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~ 220 (406) .+.. ..-..+..|+... ...||.||.+-+...+...+.+.+...........|.+++..+....+.+ T Consensus 238 ~v~~~~~~~~~~e~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~pp~~v~~~g~~~~~~----- 312 (543) T protein:vir:88 238 EVDGSDGQYPQDALPWIAVRWTKRDGEHYGRSHVEEYLGDLNSLESLNEAMIKFAMISSKVVGLVNPNGITQVRR----- 312 (543) T ss_pred eeecCCCccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccccchhh----- Confidence 0100 0112233343322 34899999999999999999999999988888888887766554443222 Q ss_pred HHHHHHhcccccCceee--ccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHH--HH---- Q lcl|Aclame:pro 221 QEFEKMREGSVGGSPLV--FDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQL--ME---- 292 (406) Q Consensus 221 ~~~~~~~~g~~~~~~~v--l~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~--~~---- 292 (406) ...|.+. .++ ..+++...++...++-.-..+..+..+..|-.+|-+... ....+..-+.++- +. T Consensus 313 -----~~~~~~g--~~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~rI~~af~~~~~-~~~~~~r~TAtEV~~r~~E~~ 384 (543) T protein:vir:88 313 -----LVKAQTG--DFVAGRKADIEFLQLEKTADFTVAKSVADAIEARLSYVFMLNSA-VQRSGERVTAEEIRYVASELE 384 (543) T ss_pred -----cccCCCc--eeecCCCCcceeeecccccchhHHHHHHHHHHHHHHHHHhhhhh-ccCCCCcccHHHHHHHHHHHH Confidence 2222221 122 234455555554433333345667777889888866532 1111111122221 11 Q ss_pred --------HHHHHHHHHHHHHHHHHHHh-hccCccchhhhhhhhcc--cchhHH-HHHHHHHHHh---C----C---CcC Q lcl|Aclame:pro 293 --------DYVTNDLPFYFDAITSELGL-KTLNDKDRRLYHIEFDT--RSVTGR-NVDEIVKLVN---N----Q---ILT 350 (406) Q Consensus 293 --------~~~~~~i~P~~~~ie~~l~~-~l~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~---~----g---~~t 350 (406) .+....+.|++...-..+.+ ..|++-....+.+++.. ....+. ..+.+....+ . + .+. T Consensus 385 ~~LG~v~~rl~~E~l~Pli~r~~~il~r~g~lP~~p~~~v~~~~vs~l~~l~r~~~~~~l~~~~~~v~~~~~p~vld~id 464 (543) T protein:vir:88 385 DTLGGVYSILSQELQLPIVRVLLNQLQATQQIPNLPQEAVEPTVTTGAEALGRGQDLDKLTQFLNAVATVSQLNGDPDLN 464 (543) T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhceeeeEEecHHHHHHHHHHHHHHHHHHHHHhccchhhhccCC Confidence 23344445555443333322 23443333333333321 111111 1111111111 0 1 122 Q ss_pred HHHH----HHHhCCCCCCCCCCCeeeeccCccchhhcc-c-cccccCcccCCCcc---------------CCCCCCC Q lcl|Aclame:pro 351 PNQG----LVELGKQKSTDPNMDRYQSSLNYVFLDKKE-E-YQDKVGIKGKGGEV---------------NAEEDKS 406 (406) Q Consensus 351 ~NE~----R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~-~-~~~~~~~~~~gg~~---------------~~~~~~~ 406 (406) .+++ .+.+|.+|-. .+..+.....+-... . .+...+....|+.- ++...+. T Consensus 465 ~d~~~~~~a~~~Gv~~~~-----i~r~~~e~~~~~~q~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (543) T protein:vir:88 465 VNNIKLRLANAIGIDTAG-----LLLTEAEKAQAQSQEMLKQGGLNAAAGIGSGVAAQATASPEAMESAMDTAGVQP 536 (543) T ss_pred HHHHHHHHHHHhCCChhh-----hcCCHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhccChHHHHHHhhhcCCCC Confidence 3332 2334554320 011111111100000 0 00000000011111 1111111 No 226 >protein:vir:78393 Length: 489 # NCBI annotation: putative structural protein # Family: family:all:584 # MgeID: mge:1851 # MgeName: SETP3 # Cross-refs: genbank:acc:YP_001110831;genbank:gi:134288592;genbank:GeneID:5179656 Probab=90.61 E-value=0.02 Score=29.90 Aligned_cols=378 Identities=12% Similarity=0.044 Sum_probs=153.3 Q ss_pred Cccccc----ccC-CCC-cchhhHHHhhcCCcccccch--hhhhccHHHHHHHHHHHHhhccceeEEEecCCcccccchH Q lcl|Aclame:pro 1 MSFFQP----LGT-SKV-SYDDYISSVLAGDVSQKYLG--VSALKNSDILTATSIIAGDIARFPLVKKDVNGDIIHDEDI 72 (406) Q Consensus 1 M~~f~~----~~~-~~~-~~~~~~~~~~~~~~~~~~~~--~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~ 72 (406) +.=|+. .+. ... ....++...-....-..+.. ..|.-.+.+...++.++..+-+-|..+ ..+..+ T Consensus 22 ~~~W~~ird~~~G~~~~~~r~~yl~~~~~~~~e~~Y~~rl~rA~~~n~~~~tl~~l~G~vfrk~p~~-------~~p~~l 94 (489) T protein:vir:78 22 APKWQKVRHALAGELVSYLRNVGLNEPDKAYGEARQAEYEAGGIVYNFTRRTLSGMVGSVMRKEPEI-------NIPKEL 94 (489) T ss_pred HHHHHHHHHHhcCcccccccCCCCCCCCCCCChHHHHHHHhccccCChHHHHHHHHhchhhcCCcce-------eccHHH Confidence 101100 000 000 00000000000000000000 001223345566666666666555443 123445 Q ss_pred HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc-----------eeEEEeecCCeeEEEEE-c-cCc--ce Q lcl|Aclame:pro 73 NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN-----------QALQFQFYRPSETTVEE-T-DNH--EI 137 (406) Q Consensus 73 ~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g-----------~~~~l~~l~p~~~~~~~-~-~~g--~~ 137 (406) ..++..-=-...+-.+|.+.++...+.+|-+++++..+..++ +|. +..+.|..+.-+. + .+| .+ T Consensus 95 ~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~T~ade~~~~~rPy-~~~~~~~~IinW~~~~v~G~~~L 173 (489) T protein:vir:78 95 EYLLKNADGSGVGLIQHAQDTLMEIDSVGRGGLLVDAPETGAATAAEQNAGLLNPT-IAFYTTENIVNWRLTRVGSVNRV 173 (489) T ss_pred HHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeeCCCCCcCHHHHHHhcCCcE-EEEechhhhcCceeeeeCCccce Confidence 555532233556678999999999999999999988764432 232 2222222221100 0 001 11 Q ss_pred E------------------------EEEEee-cCCeE--EEE----------cceeeEe--------------eccCCCC Q lcl|Aclame:pro 138 V------------------------YTFTDM-LTAKQ--VKC----------FAHDVIH--------------WKFFSHD 166 (406) Q Consensus 138 ~------------------------~~~~~~-~~g~~--~~~----------~~~~vih--------------~r~~~~~ 166 (406) . |.+... ..|.. +.+ ....++| +-....+ T Consensus 174 t~v~lrE~~~~~d~~~~f~~~~~~q~RvL~~~~~g~~~~~~~r~~~~g~~~~~~~~~~~~~g~~~l~~IPfv~~~~~~~~ 253 (489) T protein:vir:78 174 TMVVLRETWEYNEPGNEFETKYGEQYRVLDIDSDGNYRQRLFRFDAEGGAQEDVVEIYPDLGESLRGVIPFTFIGATNND 253 (489) T ss_pred eEEEEEEeEEeecCCCCccceeEEEEEEEecCCCcceEEEEEEeecCCcccceeeEEeccCCCCccCeeeEEEEecCCCC Confidence 1 000000 01100 000 0000111 1111112 Q ss_pred CccccCHHHHHHHH-HHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceee Q lcl|Aclame:pro 167 TILGRSPLLSLGDE-IDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYT 245 (406) Q Consensus 167 ~~~G~s~~~~~~~~-i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~ 245 (406) ...+.+|+..++.. +........+.. .+...+.|-.++......+++..+.... ....-|.++ .+.++.+.++. T Consensus 254 ~~~~~pPLl~LA~lni~Hy~~ssd~~~-~l~~~~~P~l~i~G~d~~~~~~~~~~~~--~~i~~g~~~--~~~lp~~~~~~ 328 (489) T protein:vir:78 254 ATIDDAPLLPLAELNIGHYRNSADNEE-SSFVVGQPTLFIYPGENLTPQAFKEANP--NGIKFGSRR--GHNLGYGGSAQ 328 (489) T ss_pred CCCCcCchHHHHHHHHHHhhhhhHHHH-HHHHcccceeeeecCccCCcccccccCc--cceeeCCcc--cccCCCCCCcc Confidence 23567777665544 444444444443 4445566766665444444443332221 112234333 45666655443 Q ss_pred eccCChhHHH--HHHHHHHHHHHHHHHhcCCHHHhcccccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------C Q lcl|Aclame:pro 246 PLEIDTNVLQ--LITSNNFSTAQIAKALRVPSYKLGVNSPN-QSVAQLMEDYVTNDLPFYFDAITSELGLKTL------N 316 (406) Q Consensus 246 ~l~~~~~d~~--~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~-~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~------~ 316 (406) -+..+...+. .++.++....++. ..++...... +........--+..|.-++.++|+.+++.|- . T Consensus 329 ~ie~~~~~~~r~~l~~le~qm~~lG------a~l~~~~~~~Ta~~~~~~~~~~~S~L~~~a~~~e~al~~~l~~~a~w~G 402 (489) T protein:vir:78 329 LIQAGENNLARQNMLDKEQQAIQIG------AQLITPTQQITAQSARIQRGADTSVMATIARNVSQAYTDALRWVAVMLG 402 (489) T ss_pred eeccCcchHHHHHHHHHHHHHHHHh------hhhccCCcchhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcC Confidence 3333333222 1222222222221 2233211111 1122233344577888899999999987652 1 Q ss_pred ccch----hhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCc Q lcl|Aclame:pro 317 DKDR----RLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGI 392 (406) Q Consensus 317 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~ 392 (406) ..+. ..+..+|+........++++.++++.|.++....++.|-.--+.++.-++.. +.......+... T Consensus 403 ~~~~~~~~i~~n~dF~~~~~d~~~~~al~~~~~~G~is~~t~~~~L~~~gv~d~~~e~~~--------~ei~~~~~~~~~ 474 (489) T protein:vir:78 403 KPEDTEVEFRLNMDFFLEPMTAQDRAAWMADINAGLLPATAYYAALRKAGVTDWTDADIK--------DAVADQPLPVAT 474 (489) T ss_pred CCCCCceEEEeecccCcccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCCCCccHHHHH--------HHHhhcCCCccc Confidence 1111 1134555555555566888889999999998888887744222211000000 000011111111 Q ss_pred ccCC--CccCCCCCC Q lcl|Aclame:pro 393 KGKG--GEVNAEEDK 405 (406) Q Consensus 393 ~~~g--g~~~~~~~~ 405 (406) ...| .+.+.+.+| T Consensus 475 ~~~g~~~~~~q~~~~ 489 (489) T protein:vir:78 475 EVQGEIPQSAQQQEK 489 (489) T ss_pred CCcccCCCCcccccC Confidence 1111 111222222 No 227 >protein:vir:105154 Length: 525 # NCBI annotation: conserved phage-related protein # Family: family:all:6660 # MgeID: mge:1466 # MgeName: C-St # Cross-refs: genbank:acc:YP_398597;genbank:gi:80159853;genbank:GeneID:3772992 Probab=89.94 E-value=0.024 Score=29.51 Aligned_cols=384 Identities=10% Similarity=0.082 Sum_probs=151.4 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchh----hhh--ccHHHHHHHHHHHHhhccce---eEEE--ecCCccccc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGV----SAL--KNSDILTATSIIAGDIARFP---LVKK--DVNGDIIHD 69 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~a~--~~~~v~~~i~~ia~~ia~~~---~~~~--~~~~~~~~~ 69 (406) |++|+.-.-.... .+-+..|++. +..+.... ++. ....|+. +=+-|-++| +++. .+++.-. T Consensus 51 ~~~~~ng~i~~v~-~~~l~~~f~n-pd~~~~~i~~l~~y~yi~~~~v~q----l~~li~~lp~l~y~i~~~~~~k~~~-- 122 (525) T protein:vir:10 51 MDLCNNGKIKTVN-LDTLQLWFNN-PDKYINNIVNLLTYYYIIDGNVFQ----LYDLIFSLPPLDYQIKVLKRDKDYK-- 122 (525) T ss_pred HHhhcCCceeeee-HHHHHhhhcC-hHHHHHHHHHHHHHhhhhcchHHH----HHHHHHhcCCcceeehhhhhccchh-- Confidence 5555431111110 0111111110 11110000 001 1111222 223333444 3332 2222211 Q ss_pred chHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC-------------------CceeEEEeecCCeeEEEE Q lcl|Aclame:pro 70 EDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK-------------------TNQALQFQFYRPSETTVE 130 (406) Q Consensus 70 ~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~-------------------~g~~~~l~~l~p~~~~~~ 130 (406) . -..+||..-..-.-...+-+.++.++...|--.-.-..+.. .|.-+.. ++-....-. T Consensus 123 ~-~~s~~n~~l~k~i~hk~ltrdll~q~a~~gtlig~wlg~~~~py~~vf~~~kyvfp~~r~~g~~v~v--id~~~f~~~ 199 (525) T protein:vir:10 123 E-DLSTINLYLEKKIQHKQLTRDLLVQLAHSGTLIGTWLGSKREPYFNVFNNLKYVFPYGRAKGKMVAV--IDLQWFDEM 199 (525) T ss_pred h-HHHHHHHHHHHhHHHHHHHHHHHHHhhccCceeEeeecCCCCcchhhhhhhhhhccccccCCceEEE--EehHHhhhh Confidence 1 12223322221111122333333333333321100001100 0111100 000000000 Q ss_pred EccCcc-----eE-------E----EEE--eecCCeEEEEcceeeEeeccC--CCCCccccCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 131 ETDNHE-----IV-------Y----TFT--DMLTAKQVKCFAHDVIHWKFF--SHDTILGRSPLLSLGDEIDLQTGGINT 190 (406) Q Consensus 131 ~~~~g~-----~~-------~----~~~--~~~~g~~~~~~~~~vih~r~~--~~~~~~G~s~~~~~~~~i~~~~~~~~~ 190 (406) .+.... +. | .|. ...--+...+|.+.++|+|.. .++.-.|.|-+..+.-.|.......+. T Consensus 200 ~~~~r~~~~~~lsp~i~~~~y~~~~~~~~~~~~~~r~i~LP~e~t~~lr~~tl~rnqrlG~s~vtp~l~dI~hk~klrd~ 279 (525) T protein:vir:10 200 SELERKLTFENLSPLITENKYKKWKEYNGENEDALRYIMLPISKTLVARIHTLSRNQRLGIPYGTQTLFDIQHKQKLRDL 279 (525) T ss_pred hHHHHHHHHHhhchhhhhhhhhHHhhcccccchhheeeecccceeEEeeecccccCcccCcchhhhHHHHHHHHHHHHHH Confidence 000000 00 0 000 001113456888999999964 456667888888888888877777766 Q ss_pred HHHHHhcCCCcceEEeecCCCC------HHHHHHHHHHHHHHhcc--cccCceee--ccC--Cceeeec-----cCChhH Q lcl|Aclame:pro 191 LIKFFKDGFSSGILTMKGAQLS------GDARQRARQEFEKMREG--SVGGSPLV--FDS--TMEYTPL-----EIDTNV 253 (406) Q Consensus 191 ~~~~~~ng~~~~~~~~~~~~~~------~e~~~~~~~~~~~~~~g--~~~~~~~v--l~~--g~~~~~l-----~~~~~d 253 (406) ..+....=..+-.+++..++-+ +...+++-+..+.+... ....++++ ++. .+.|-.+ +..++. T Consensus 280 EqsIA~kii~a~avLk~gg~~gn~mk~p~~~kqkil~gVk~aleK~~kdK~Gi~vi~~Pdfa~~efp~ik~~~~glDg~K 359 (525) T protein:vir:10 280 EQSIADKIIKAMAVLKFRGKDDNDSKVKESAKRKVLAGVKRALEKGVKDKNGIACIAMPDFATFEFPEIKNGDKTLDPKK 359 (525) T ss_pred HHHHHHHhhhhheeeeeccccCccccCchHHHHHHHHHHHHHHhcccccccCeEEEeccceeecccccccCcccCCCchh Confidence 6666666555666676554322 22344555555555532 11223443 232 2222222 223332 Q ss_pred HHHHHHHHHHHHHHHHHhcCCHHHhcc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----ccchhhhhhhhc Q lcl|Aclame:pro 254 LQLITSNNFSTAQIAKALRVPSYKLGV-NSPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLN----DKDRRLYHIEFD 328 (406) Q Consensus 254 ~~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~----~~~~~~~~~~~~ 328 (406) -+....+|-.++|++.+++++ .++++++.-...-||. -|.-+++.||+..+ +|+. .....-+.+..+ T Consensus 360 ------~d~I~~DI~~A~GlS~sL~nGdggNyAtaslnld~fyk-kigVm~e~Iee~y~-kL~d~Vl~~~k~~nyifnyd 431 (525) T protein:vir:10 360 ------YDSIDNDITNATGISQVLTNGTKGNYASAKLNLDVFYK-KIGVMLEIIEEIYN-QLIDIILGEEKGCNYIFQYN 431 (525) T ss_pred ------hhhhhhhhhhhhccceeeecCCCCceeeeeeeHHHHHH-HHHHHHHHHHHHHH-HHHhhhcCcccCcceEEecC Confidence 233446799999999999954 4456655444555554 46678888885554 5543 322223444444 Q ss_pred cc--chhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CC---------CCCeeeeccCccchhhccccccccCccc- Q lcl|Aclame:pro 329 TR--SVTGRNVDEIVKLVNNQILTPNQGLVELGKQKST--DP---------NMDRYQSSLNYVFLDKKEEYQDKVGIKG- 394 (406) Q Consensus 329 ~~--~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~--~~---------~gd~~~~~~n~~~~~~~~~~~~~~~~~~- 394 (406) .+ -+.+++++.+-++...|+... -+....|+.--+ ++ --++.+.|.+..-+...+ ....+.+. T Consensus 432 kd~pi~~kkk~d~LIkL~d~g~s~k-~vldl~gis~e~y~E~s~yEtE~lkl~EKi~pp~~~~v~SGk~--~n~iG~P~~ 508 (525) T protein:vir:10 432 KDTPIEREKKLDTLIKLEAQGYSAK-YVLDILGISSEEYFEESIYEIEKLKLREKIMPPLNTNVLSGKD--GNDIGSPKL 508 (525) T ss_pred CCchhhhhhhhhhhhhhhccchhhh-hhhhhhccCcchHHHHHHHHHHHHHHhhhccccccceeeeccc--cccccCCcc Confidence 32 356777888888888887432 223334332110 00 011222222221111000 00001111 Q ss_pred CCCccCCCCCCC Q lcl|Aclame:pro 395 KGGEVNAEEDKS 406 (406) Q Consensus 395 ~gg~~~~~~~~~ 406 (406) .|.++++.--+| T Consensus 509 dd~~~~dati~s 520 (525) T protein:vir:10 509 DDSDSSDATIES 520 (525) T ss_pred CCCcchhhhhhh Confidence 111111111112 No 228 >protein:vir:101189 Length: 516 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932511;genbank:gi:37651637;genbank:GeneID:2610682 Probab=88.83 E-value=0.03 Score=28.94 Aligned_cols=380 Identities=9% Similarity=0.032 Sum_probs=168.6 Q ss_pred Cc------ccccc---------cCCCCcchhh-----HH--------HhhcCCcccccch--------------hhhhcc Q lcl|Aclame:pro 1 MS------FFQPL---------GTSKVSYDDY-----IS--------SVLAGDVSQKYLG--------------VSALKN 38 (406) Q Consensus 1 M~------~f~~~---------~~~~~~~~~~-----~~--------~~~~~~~~~~~~~--------------~~a~~~ 38 (406) |+ ||-+. +.+..|+..+ .. ...+|..++++.. ++.+.+ T Consensus 1 ~~~~~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~ 80 (516) T protein:vir:10 1 MKFLDLFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQLINN 80 (516) T ss_pred CCchHhcccccchhhhHHhhhhcCCcCcccCCCCCCCceeeecCCCcccccceeeeeeccccccchHHHHHHHHHHHhhc Confidence 44 43221 1111111110 00 0111111111100 124678 Q ss_pred HHHHHHHHHHHHhhccc-----eeEEEecCCc------ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 39 SDILTATSIIAGDIARF-----PLVKKDVNGD------IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRI 107 (406) Q Consensus 39 ~~v~~~i~~ia~~ia~~-----~~~~~~~~~~------~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i 107 (406) |.|.+||+.|.+.+.-+ |+.+.=.+.+ ........++|+. -+-...+ ..++..|.+.|..|..+ T Consensus 81 pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~ik~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~fhK 155 (516) T protein:vir:10 81 PEVERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVCRL-LDASRKL----DTLFRRWYVDSRIFFHK 155 (516) T ss_pred cchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceEEEEE Confidence 99999999999887644 3333211111 0111233344431 2233333 34566777889999887 Q ss_pred EecCCCceeEEEeecCCeeEEEEEcc-----Ccce-------EEEEE-----ee------cCCeEEEEcceeeEeec--c Q lcl|Aclame:pro 108 LRDPKTNQALQFQFYRPSETTVEETD-----NHEI-------VYTFT-----DM------LTAKQVKCFAHDVIHWK--F 162 (406) Q Consensus 108 ~~~~~~g~~~~l~~l~p~~~~~~~~~-----~g~~-------~~~~~-----~~------~~g~~~~~~~~~vih~r--~ 162 (406) +.|....-+.++..|+|..++.++.- +|.. +|.|. .. ..+.+++++.+-|.|.. . T Consensus 156 iid~~k~GI~Elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSGL 235 (516) T protein:vir:10 156 IMPNPKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSGL 235 (516) T ss_pred EecCccccceeeeeeCCcceeeEeeecccccccchhhhhhhheeeeccCccccccccceeCCCcceeechhheeeecccc Confidence 66655566899999999998765432 1211 12111 01 12234566666665544 2 Q ss_pred CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHh---------ccc-- Q lcl|Aclame:pro 163 FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMR---------EGS-- 230 (406) Q Consensus 163 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~---------~g~-- 230 (406) ...++-.-+|-+..|...+....-+.....-+-=..++-.-++ .-.+.+-+...++....+-..+ +|. T Consensus 236 ~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ 315 (516) T protein:vir:10 236 MDCSDRGIIGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTVK 315 (516) T ss_pred eeCCCCceeeeehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeec Confidence 2333333377777777777766666665554432333333333 3334444433444333332222 221 Q ss_pred c-cCceeec----------cCCceeeeccC--ChhHHHHHHHHHHHHHHHHHHhcCCHHHhccccc-----chhHHHHH- Q lcl|Aclame:pro 231 V-GGSPLVF----------DSTMEYTPLEI--DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSP-----NQSVAQLM- 291 (406) Q Consensus 231 ~-~~~~~vl----------~~g~~~~~l~~--~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~-----~~n~~~~~- 291 (406) + ......+ ..|.+++.|.- +.-+| +-.++..+.+.++++||.+-|+..+. +.+.|-.+ T Consensus 316 ddrk~msMlEDyWLpRReGgrgTEItTLpGgqnlgem---~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRD 392 (516) T protein:vir:10 316 NQKRNLSMTEDYWLMRRDGKSVTEVSSLPGAQTMGDM---DDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRD 392 (516) T ss_pred cchhhhhhHhhhcccccCCCCccceeeccccCCcChH---HHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHH Confidence 1 1111122 24677777653 33344 44456778899999999999974332 12222111 Q ss_pred HHHHHHHHHHHHHHHH----HHHHhhccC-----ccchh----hhhhhhcccc---------hhHHHHHHHHHHH--hCC Q lcl|Aclame:pro 292 EDYVTNDLPFYFDAIT----SELGLKTLN-----DKDRR----LYHIEFDTRS---------VTGRNVDEIVKLV--NNQ 347 (406) Q Consensus 292 ~~~~~~~i~P~~~~ie----~~l~~~l~~-----~~~~~----~~~~~~~~~~---------~~~~~~~~~~~~~--~~g 347 (406) +.=++..|.-+-..+. +.|...|+. ..++. .+.++|..+. .+..|+..+..+- -+. T Consensus 393 EiKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGk 472 (516) T protein:vir:10 393 ELDFRKFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGK 472 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcc Confidence 1222333444444444 444444332 23332 2233332221 2334444444332 345 Q ss_pred CcCHHHHHHH-hCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCc-cCCCCCCC Q lcl|Aclame:pro 348 ILTPNQGLVE-LGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE-VNAEEDKS 406 (406) Q Consensus 348 ~~t~NE~R~~-~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~-~~~~~~~~ 406 (406) +++.+=+|+. |.+.-.+-+.-+ ..-....+.|- .+-++..+ T Consensus 473 y~s~~yi~k~ILr~tDeei~~e~------------------k~I~~E~~~~~~~~p~~~~~ 515 (516) T protein:vir:10 473 YVSHDYVMKNILQMTEEQIAQEE------------------KQIEQEAGIKRFQNPENEDD 515 (516) T ss_pred ccchHHHHHHHhcCCHhhHHHHH------------------HHHHHhhhCCCCCCCCcccc Confidence 7777777754 444321000000 00001111110 01111111 No 229 >protein:vir:101806 Length: 516 # NCBI annotation: gp20 # Family: family:all:1036 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238883;genbank:gi:66391958;genbank:GeneID:3416633 Probab=88.83 E-value=0.03 Score=28.94 Aligned_cols=380 Identities=9% Similarity=0.032 Sum_probs=168.6 Q ss_pred Cc------ccccc---------cCCCCcchhh-----HH--------HhhcCCcccccch--------------hhhhcc Q lcl|Aclame:pro 1 MS------FFQPL---------GTSKVSYDDY-----IS--------SVLAGDVSQKYLG--------------VSALKN 38 (406) Q Consensus 1 M~------~f~~~---------~~~~~~~~~~-----~~--------~~~~~~~~~~~~~--------------~~a~~~ 38 (406) |+ ||-+. +.+..|+..+ .. ...+|..++++.. ++.+.+ T Consensus 1 ~~~~~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~ 80 (516) T protein:vir:10 1 MKFLDLFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQLINN 80 (516) T ss_pred CCchHhcccccchhhhHHhhhhcCCcCcccCCCCCCCceeeecCCCcccccceeeeeeccccccchHHHHHHHHHHHhhc Confidence 44 43221 1111111110 00 0111111111100 124678 Q ss_pred HHHHHHHHHHHHhhccc-----eeEEEecCCc------ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 39 SDILTATSIIAGDIARF-----PLVKKDVNGD------IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRI 107 (406) Q Consensus 39 ~~v~~~i~~ia~~ia~~-----~~~~~~~~~~------~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i 107 (406) |.|.+||+.|.+.+.-+ |+.+.=.+.+ ........++|+. -+-...+ ..++..|.+.|..|..+ T Consensus 81 pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~ik~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~fhK 155 (516) T protein:vir:10 81 PEVERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVCRL-LDASRKL----DTLFRRWYVDSRIFFHK 155 (516) T ss_pred cchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceEEEEE Confidence 99999999999887644 3333211111 0111233344431 2233333 34566777889999887 Q ss_pred EecCCCceeEEEeecCCeeEEEEEcc-----Ccce-------EEEEE-----ee------cCCeEEEEcceeeEeec--c Q lcl|Aclame:pro 108 LRDPKTNQALQFQFYRPSETTVEETD-----NHEI-------VYTFT-----DM------LTAKQVKCFAHDVIHWK--F 162 (406) Q Consensus 108 ~~~~~~g~~~~l~~l~p~~~~~~~~~-----~g~~-------~~~~~-----~~------~~g~~~~~~~~~vih~r--~ 162 (406) +.|....-+.++..|+|..++.++.- +|.. +|.|. .. ..+.+++++.+-|.|.. . T Consensus 156 iid~~k~GI~Elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSGL 235 (516) T protein:vir:10 156 IMPNPKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSGL 235 (516) T ss_pred EecCccccceeeeeeCCcceeeEeeecccccccchhhhhhhheeeeccCccccccccceeCCCcceeechhheeeecccc Confidence 66655566899999999998765432 1211 12111 01 12234566666665544 2 Q ss_pred CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHh---------ccc-- Q lcl|Aclame:pro 163 FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMR---------EGS-- 230 (406) Q Consensus 163 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~---------~g~-- 230 (406) ...++-.-+|-+..|...+....-+.....-+-=..++-.-++ .-.+.+-+...++....+-..+ +|. T Consensus 236 ~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ 315 (516) T protein:vir:10 236 MDCSDRGIIGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTVK 315 (516) T ss_pred eeCCCCceeeeehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeec Confidence 2333333377777777777766666665554432333333333 3334444433444333332222 221 Q ss_pred c-cCceeec----------cCCceeeeccC--ChhHHHHHHHHHHHHHHHHHHhcCCHHHhccccc-----chhHHHHH- Q lcl|Aclame:pro 231 V-GGSPLVF----------DSTMEYTPLEI--DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSP-----NQSVAQLM- 291 (406) Q Consensus 231 ~-~~~~~vl----------~~g~~~~~l~~--~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~-----~~n~~~~~- 291 (406) + ......+ ..|.+++.|.- +.-+| +-.++..+.+.++++||.+-|+..+. +.+.|-.+ T Consensus 316 ddrk~msMlEDyWLpRReGgrgTEItTLpGgqnlgem---~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRD 392 (516) T protein:vir:10 316 NQKRNLSMTEDYWLMRRDGKSVTEVSSLPGAQTMGDM---DDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRD 392 (516) T ss_pred cchhhhhhHhhhcccccCCCCccceeeccccCCcChH---HHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHH Confidence 1 1111122 24677777653 33344 44456778899999999999974332 12222111 Q ss_pred HHHHHHHHHHHHHHHH----HHHHhhccC-----ccchh----hhhhhhcccc---------hhHHHHHHHHHHH--hCC Q lcl|Aclame:pro 292 EDYVTNDLPFYFDAIT----SELGLKTLN-----DKDRR----LYHIEFDTRS---------VTGRNVDEIVKLV--NNQ 347 (406) Q Consensus 292 ~~~~~~~i~P~~~~ie----~~l~~~l~~-----~~~~~----~~~~~~~~~~---------~~~~~~~~~~~~~--~~g 347 (406) +.=++..|.-+-..+. +.|...|+. ..++. .+.++|..+. .+..|+..+..+- -+. T Consensus 393 EiKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGk 472 (516) T protein:vir:10 393 ELDFRKFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGK 472 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcc Confidence 1222333444444444 444444332 23332 2233332221 2334444444332 345 Q ss_pred CcCHHHHHHH-hCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCc-cCCCCCCC Q lcl|Aclame:pro 348 ILTPNQGLVE-LGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE-VNAEEDKS 406 (406) Q Consensus 348 ~~t~NE~R~~-~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~-~~~~~~~~ 406 (406) +++.+=+|+. |.+.-.+-+.-+ ..-....+.|- .+-++..+ T Consensus 473 y~s~~yi~k~ILr~tDeei~~e~------------------k~I~~E~~~~~~~~p~~~~~ 515 (516) T protein:vir:10 473 YVSHDYVMKNILQMTEEQIAQEE------------------KQIEQEAGIKRFQNPENEDD 515 (516) T ss_pred ccchHHHHHHHhcCCHhhHHHHH------------------HHHHHhhhCCCCCCCCcccc Confidence 7777777754 444321000000 00001111110 01111111 No 230 >protein:vir:10447 Length: 536 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848294;genbank:gi:30387485;genbank:GeneID:1733984 Probab=87.58 E-value=0.038 Score=28.38 Aligned_cols=385 Identities=9% Similarity=0.028 Sum_probs=147.2 Q ss_pred Ccc-------------cccccCCCCcchhhHHHh---hcCCc----c-cccchhhhhccHHHHHHHHHHHHhhcc-c--- Q lcl|Aclame:pro 1 MSF-------------FQPLGTSKVSYDDYISSV---LAGDV----S-QKYLGVSALKNSDILTATSIIAGDIAR-F--- 55 (406) Q Consensus 1 M~~-------------f~~~~~~~~~~~~~~~~~---~~~~~----~-~~~~~~~a~~~~~v~~~i~~ia~~ia~-~--- 55 (406) |.= |+.+++.+.++...+.+. +-.+. + ..-....-.-.++.-.|++.+|..+.+ + T Consensus 1 m~~~~~~~~~~~~~~r~~~l~~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~~~~dst~~~a~~~Laa~l~~~ltP~ 80 (536) T protein:vir:10 1 MAEKRTGLAEDGAKSVYERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYQTPWQAVGARGLNNLASKLMLALFPM 80 (536) T ss_pred CcchhhchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccCCCCCcccccccccccccHHHHHHHHHHHHHhhhcCC Confidence 432 333334444444322222 11110 0 000000112233445566666555433 2 Q ss_pred -eeEEEecCC-c----c-------cccchH---HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc-eeEE Q lcl|Aclame:pro 56 -PLVKKDVNG-D----I-------IHDEDI---NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN-QALQ 118 (406) Q Consensus 56 -~~~~~~~~~-~----~-------~~~~~~---~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g-~~~~ 118 (406) ||.-..... . . .....+ .+.+.. --..-+.+.-+..+..++.++||+..|+..+...+ .... T Consensus 81 ~~WFrl~~~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~~-~l~~snf~~~~~~~~~~L~~~G~a~ly~~e~~~~~~~~~~ 159 (536) T protein:vir:10 81 QTWMRLTISEYEAKQLLSDPDGLAKVDEGLSMVERIIMN-YIESNSYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMK 159 (536) T ss_pred CcccccccChhhhhccccchhhHHHHHHHHHHHHHHHHH-HHHhcCcHHHHHHHHHHHHhHCcEeEEEeeCCCCceeeEE Confidence 453322111 0 0 001111 112211 11123455566677888889999999987654322 2234 Q ss_pred EeecCCeeEEEEEccCcceEEEE------------------------------------Eee--cCCeEE---EE----- Q lcl|Aclame:pro 119 FQFYRPSETTVEETDNHEIVYTF------------------------------------TDM--LTAKQV---KC----- 152 (406) Q Consensus 119 l~~l~p~~~~~~~~~~g~~~~~~------------------------------------~~~--~~g~~~---~~----- 152 (406) .+|+ ..+.+..+..|++.-.+ ... .++... .+ T Consensus 160 ~~pl--~~~~v~~d~~G~vd~i~r~~~~t~~~l~~~fg~~~~~~~~~~~~~~~v~v~~~V~~~~~~~~~~~~~e~~g~~v 237 (536) T protein:vir:10 160 LYRL--SSYVVQRDAFGNVLQMVTRDQIAFGALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEASGEYLRYEEVEGMEV 237 (536) T ss_pred EEEc--CeEEEeeCCCCCeeEEeeeeeccHHHHHHhhhhhhcccccccCcccceEEEEEEEEecCCCcEEEEEeecCccc Confidence 5555 34444444444331111 010 011000 00 Q ss_pred ---------cceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHH Q lcl|Aclame:pro 153 ---------FAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQE 222 (406) Q Consensus 153 ---------~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~ 222 (406) ..-..+.+|+...+ ..||.||.+-+...+...+.+.+.......-...|...+...+...++.. T Consensus 238 ~~~~g~~~f~~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~~------ 311 (536) T protein:vir:10 238 QGSDGTYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRL------ 311 (536) T ss_pred cccccccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCcccccchhhh------ Confidence 01112333433233 48999999999999999999988888866555566555554443332211 Q ss_pred HHHHhcccccCcee-eccCCceeeeccCChhHHH-HHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHH---------- Q lcl|Aclame:pro 223 FEKMREGSVGGSPL-VFDSTMEYTPLEIDTNVLQ-LITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQL---------- 290 (406) Q Consensus 223 ~~~~~~g~~~~~~~-vl~~g~~~~~l~~~~~d~~-~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~---------- 290 (406) ..+.+ |.++ -..+.+...++...+ +++ ..+..+..+..|..+|-+.. +....+..-+.++- T Consensus 312 ----~~~~~-g~~v~g~~~~v~~~~~~~~~-~~~~~~~~i~~~~~rI~~af~~~~-l~~~~~~r~TAtEV~~r~~E~~~~ 384 (536) T protein:vir:10 312 ----TKAQT-GDFVTGRPEDISFLQLEKQA-DFTVAKAVSDAIEARLSFAFMLNS-AVQRTGERVTAEEIRYVASELEDT 384 (536) T ss_pred ----ccCCC-cceecCCcccceeeeccccc-cchHHHHHHHHHHHHHHHHHhhhh-cccCCCCCccHHHHHHHHHHHHHH Confidence 11111 1111 122334444544333 333 33556677778888886542 21111111122211 Q ss_pred ----HHHHHHHHHHHHHHHHHHHHH-hhccCccchhhhhhhhcccchhHHHHH-------HHHHHHhCC------CcCHH Q lcl|Aclame:pro 291 ----MEDYVTNDLPFYFDAITSELG-LKTLNDKDRRLYHIEFDTRSVTGRNVD-------EIVKLVNNQ------ILTPN 352 (406) Q Consensus 291 ----~~~~~~~~i~P~~~~ie~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g------~~t~N 352 (406) ...+....+.|++...-..+. ..++++.....+.+++.+.-..-.+.. .+..+.+.+ .+..+ T Consensus 385 LG~v~~rl~~Ell~Pli~r~~~il~r~g~lP~~p~~~v~~~~vs~l~~l~r~~~~~~l~~~~~~la~~~P~~ld~~id~d 464 (536) T protein:vir:10 385 LGGVYSILSQELQLPLVRVLLKQLQATQQIPELPKEAVEPTISTGLEAIGRGQDLDKLERCVTAWAALAPMRDDPDINLA 464 (536) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCChhhccceEEecHHHHHHHHHHHHHHHHHHHHHhhchhhhcccCCHH Confidence 123445555666655444442 234443333333333322110111111 111111111 12333 Q ss_pred HHH----HHhCCCCCCCCCCCeeeeccCccchhhc-c-cccc---------ccCcccCCCc------cCCCCCCC Q lcl|Aclame:pro 353 QGL----VELGKQKSTDPNMDRYQSSLNYVFLDKK-E-EYQD---------KVGIKGKGGE------VNAEEDKS 406 (406) Q Consensus 353 E~R----~~~g~~p~~~~~gd~~~~~~n~~~~~~~-~-~~~~---------~~~~~~~gg~------~~~~~~~~ 406 (406) ++- +.+|.+|.. .+..+.-...+-.. . ..+. ..+....++. -|..+-+- T Consensus 465 ~~~~~~a~~~Gv~p~~-----~irt~eev~~~r~q~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 534 (536) T protein:vir:10 465 MIKLRIANAIGIDTSG-----ILLTEEQKQQKMAQQSMQMGMDNGAAALAQGMAAQATASPEAMAAAADSVGLQP 534 (536) T ss_pred HHHHHHHHHcCCCchh-----hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHhhhhccccCC Confidence 322 234553320 01111000000000 0 0000 0000111111 01111111 No 231 >protein:vir:94956 Length: 452 # NCBI annotation: putative phage structural protein # Family: family:all:584 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239276;genbank:gi:66392058;genbank:GeneID:5076601 Probab=86.99 E-value=0.042 Score=28.15 Aligned_cols=364 Identities=11% Similarity=-0.016 Sum_probs=156.5 Q ss_pred Ccccccc-cC-CCCcchhhHHHhhcCCcc------cccchh-------------hhhccHHHHHHHHHHHHhhccceeEE Q lcl|Aclame:pro 1 MSFFQPL-GT-SKVSYDDYISSVLAGDVS------QKYLGV-------------SALKNSDILTATSIIAGDIARFPLVK 59 (406) Q Consensus 1 M~~f~~~-~~-~~~~~~~~~~~~~~~~~~------~~~~~~-------------~a~~~~~v~~~i~~ia~~ia~~~~~~ 59 (406) |+.-.+. .. .-.+.=..+.....|... .++... .|.-.+.+...++.++..+-+-|..+ T Consensus 1 m~V~~~hp~y~a~~~~W~~~rd~~~G~~~~r~~g~~YLpk~~~E~~~~Y~~rl~rA~~~n~~~~t~~~~~G~vf~k~p~~ 80 (452) T protein:vir:94 1 MPIETKHPEYLAYENDWIDCRVASLGQREVKKKGVRFLPKLSGQTDDMYNAYKQRALFYSITSKTLSALSGMVLDQPPVI 80 (452) T ss_pred CCCCCcCHHHHHHHHHHHHHHHHhcChHHHHcCCcccCCCCCCCCHHHHHHHHhhccCCchHHHHHHHHhchhhcCCcee Confidence 7742211 00 000000112222222211 011000 01123344555666666665555543 Q ss_pred EecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeE-EEEEccCcce- Q lcl|Aclame:pro 60 KDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSET-TVEETDNHEI- 137 (406) Q Consensus 60 ~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~-~~~~~~~g~~- 137 (406) . ....+..+.. . ....+-.+|.+.++...+.+|-+++++..+..+++|.-..+ .|..+ --..+..|++ T Consensus 81 ~-------~p~~l~~~~~-D-~~G~~L~~~~~~~~~~~l~~G~~~ilVD~p~~g~rPy~~~~-~~~~Ii~W~~~~~g~l~ 150 (452) T protein:vir:94 81 T-------HPDAMSKYFE-D-QSGIQFYEVFTRAVEETLLMGRVGVFIDRPLTGGDPYISVY-TTENILNWEEDEDGRLL 150 (452) T ss_pred c-------ccHHHHHHHh-c-ccCCCHHHHHHHHHHHHHhcCeEEEEEeeccCCCceEEEEe-chhhhcCccccccCCee Confidence 1 2334444422 1 45677799999999999999999999988877777754332 22211 1111111111 Q ss_pred -----------------------EEEEEeecCCeEE--EEc--ce---------------------eeEeeccCCCCCcc Q lcl|Aclame:pro 138 -----------------------VYTFTDMLTAKQV--KCF--AH---------------------DVIHWKFFSHDTIL 169 (406) Q Consensus 138 -----------------------~~~~~~~~~g~~~--~~~--~~---------------------~vih~r~~~~~~~~ 169 (406) .|.+.....|... .+. .. .++.+-..+.+... T Consensus 151 ~v~lre~~~~~d~~d~f~~~~~~~yRvL~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~IP~v~~~~~~~~~~~ 230 (452) T protein:vir:94 151 MVVLREFYTVRDTADRYVQNIRVRYRCLELVDGLLQITVHETQDGKVWELAKTSTIQNVGVTMDYIPFFCITPSGLSMTP 230 (452) T ss_pred EEEEEEEEEEecCCCcccceeEEEEEEEEEeCCeEEEEEEEccCCceeeeccceeecCCCcccceeEEEEEcCCCCCCCC Confidence 1111100111100 000 00 01111111122345 Q ss_pred ccCHHHHHHHH-HHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccC-Cc--eee Q lcl|Aclame:pro 170 GRSPLLSLGDE-IDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDS-TM--EYT 245 (406) Q Consensus 170 G~s~~~~~~~~-i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~-g~--~~~ 245 (406) |.+|+..++.. +........+... +...+.|-.++....... ...-|.+ .++.+++ |. +|. T Consensus 231 ~~pPLl~LA~ln~~hy~~~sd~~~~-l~~~~~P~l~~~g~~~~~------------~i~iG~~--~~~~lpe~~~~~~yi 295 (452) T protein:vir:94 231 AKPPMIDIVDINYSHYRTSADLEHG-RHFTGLPTPWITGAESQS------------TMHIGST--KAWVIPEVAAKVGFL 295 (452) T ss_pred CccchHHHHHHHHHHhcchhHHHHH-HHHcccceeEeecCcCCC------------ceEeccc--ccccCCCCCCcceEE Confidence 77887765554 4444444444443 444455655544322111 1233433 3566774 54 555 Q ss_pred eccCChhH--HHHHHHHHHHHHHHHHHhcCCHHHhc-ccccchhHHH--HHHHHHHHHHHHHHHHHHHHHHhhccC---- Q lcl|Aclame:pro 246 PLEIDTNV--LQLITSNNFSTAQIAKALRVPSYKLG-VNSPNQSVAQ--LMEDYVTNDLPFYFDAITSELGLKTLN---- 316 (406) Q Consensus 246 ~l~~~~~d--~~~~e~~~~~~~~Ia~~fgvpp~~lg-~~~~~~n~~~--~~~~~~~~~i~P~~~~ie~~l~~~l~~---- 316 (406) +.+-+.-. .+.++.++....++.+ .++- .+....+.+. ....-.+..|.-++.++|+.+++.|-. T Consensus 296 e~~g~~i~~~~~~l~~le~~m~~~Ga------~ll~~~~~~~~s~ea~~~~~~~~~s~L~~~a~~~e~al~~~l~~~a~w 369 (452) T protein:vir:94 296 EFTGQGLQSLEKALSEKQAQLASLSA------RLIDNSTRGSEATETVKLRYMSETASLKSVTRAVEALLNKAYSCIMDM 369 (452) T ss_pred ccCchhHHHHHHHHHHHHHHHHHHHH------HhhccCCCcchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH Confidence 55544333 2222222222222222 2221 1111112222 222333577888888999988765511 Q ss_pred --ccch--hhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCc Q lcl|Aclame:pro 317 --DKDR--RLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGI 392 (406) Q Consensus 317 --~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~ 392 (406) .... ..+.-+|....+....++++.++++.|.++....++.+..--+.++..+.-. +-.+.....+...++ T Consensus 370 ~g~~~~~~v~~n~dF~~~~~~~~~~~al~~~~~~G~is~~t~~~~L~~~gvl~~~~e~~~-----i~~E~~~~~~~~~~~ 444 (452) T protein:vir:94 370 ESMGGTLNIKLNSAFLDSKLTAAELKAWVEAYLSGGISKEIYIHALKVGKVLPPPGESMG-----VIPDPPAPEPSPSNT 444 (452) T ss_pred cCCCCceEEEeccccccccCCHHHHHHHHHHHhcCCCcHHHHHHHHHhCCCCCCccCHHH-----HHHHhhccCcccCCC Confidence 1111 1133344444445667888889999999999888888733222222111100 001111111122222 Q ss_pred ccCCCccC Q lcl|Aclame:pro 393 KGKGGEVN 400 (406) Q Consensus 393 ~~~gg~~~ 400 (406) +..||.+. T Consensus 445 ~~~~~~~~ 452 (452) T protein:vir:94 445 PPNPSSKA 452 (452) T ss_pred CCCCccCC Confidence 33333322 No 232 >protein:vir:100598 Length: 516 # NCBI annotation: gp20 head portal vertex protein # Family: family:all:1036 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656382;genbank:gi:109290133;genbank:GeneID:4156576 Probab=86.60 E-value=0.044 Score=28.00 Aligned_cols=380 Identities=8% Similarity=0.038 Sum_probs=164.2 Q ss_pred Cc------ccccc---------cCCCCcchh-----hHHH--------hhcCCcccccch--------------hhhhcc Q lcl|Aclame:pro 1 MS------FFQPL---------GTSKVSYDD-----YISS--------VLAGDVSQKYLG--------------VSALKN 38 (406) Q Consensus 1 M~------~f~~~---------~~~~~~~~~-----~~~~--------~~~~~~~~~~~~--------------~~a~~~ 38 (406) |+ ||.+. +.+..|+.. .... ..+|..+.++.- ++.+.+ T Consensus 1 ~~~~~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~DGa~~i~~~~~~~~~~g~~~~~~d~~~~~~~~~~LI~~YR~ma~~ 80 (516) T protein:vir:10 1 MKFLDLFKFWDRVDQNEYDERLKQGHESIATPKKDDGATEIEAREGESSYNALMQQFFGIDNNISGTKDLINTYRQLTNN 80 (516) T ss_pred CCchHhcccccchhhHHHHhhhcCCCCcccCCCCccCceeeecCcccccccceeeeeecccCccccHHHHHHHHHHhhhc Confidence 44 44221 111111111 0000 111111111110 224678 Q ss_pred HHHHHHHHHHHHhhccc-----eeEEEecCCc------ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEE Q lcl|Aclame:pro 39 SDILTATSIIAGDIARF-----PLVKKDVNGD------IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRI 107 (406) Q Consensus 39 ~~v~~~i~~ia~~ia~~-----~~~~~~~~~~------~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i 107 (406) |.|..||+.|.+.+.-+ |+.+--.+.+ ........++|+. -+-...+ ..++..|.+.|..|..+ T Consensus 81 pEvd~Av~eIvneaiv~d~~~~pV~l~l~~~e~s~sik~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~fhK 155 (516) T protein:vir:10 81 PEVERAVANIVNEAVVYEKGHKVVSLDLDDTEFSSSIKDKILEEFDEICRL-LDASRKL----DTLFRRWYIDSRIFFHK 155 (516) T ss_pred cchhHHHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHH-hccchhh----hHHHHhhhhcceEEEEE Confidence 99999999999887654 3333211111 0011233334331 2223333 34566777889999887 Q ss_pred EecCCCceeEEEeecCCeeEEEEEcc-----Cc------ceEEEEEe------ecC------CeEEEEcceeeEeecc-- Q lcl|Aclame:pro 108 LRDPKTNQALQFQFYRPSETTVEETD-----NH------EIVYTFTD------MLT------AKQVKCFAHDVIHWKF-- 162 (406) Q Consensus 108 ~~~~~~g~~~~l~~l~p~~~~~~~~~-----~g------~~~~~~~~------~~~------g~~~~~~~~~vih~r~-- 162 (406) +.|....-+.++..|+|..++.++.- .| ..-|+++. ..+ +.+.+++.+-|.+... T Consensus 156 iid~~k~GI~elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~daI~y~hSGl 235 (516) T protein:vir:10 156 IMPNPKEGIVELRRLDPRHVEYYREIVTSDVGGTSVVKGYREFFVYTTGNEGYAYNGRLFEPNTRIKIPRSAIVYAHSGL 235 (516) T ss_pred EecCcccceeeeeeeCCcceeeEEeeecccCcchhhhhceeeeeeeecCccceeccccccCCCCceecchhheeeeecCc Confidence 76655566899999999998765432 11 10111111 111 1234455554433221 Q ss_pred CCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHh---------ccc-- Q lcl|Aclame:pro 163 FSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMR---------EGS-- 230 (406) Q Consensus 163 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~---------~g~-- 230 (406) .+.++-.=+|-+..|...+....-+.....-+-=..++-.-++ .-.+.+-+...++....+-..+ +|. T Consensus 236 ~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~KNklvYDa~TGev~ 315 (516) T protein:vir:10 236 QDCSDRGIVGYLHNAVKPANQLKLLEDALVIYRITRAPERRVFYIDVGNMPNRKATEYVNGIMQSLKNRVVYDSNTGTVK 315 (516) T ss_pred ccCCCCceeceehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeec Confidence 1222222256677777776666655555544432333333333 3334444333343333332222 221 Q ss_pred c-cCceeec----------cCCceeeeccC--ChhHHHHHHHHHHHHHHHHHHhcCCHHHhccccc-----chhHHH--- Q lcl|Aclame:pro 231 V-GGSPLVF----------DSTMEYTPLEI--DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSP-----NQSVAQ--- 289 (406) Q Consensus 231 ~-~~~~~vl----------~~g~~~~~l~~--~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~-----~~n~~~--- 289 (406) + ......+ ..|.+++.|.- +.-+| +-.++..+.+.++++||.+-|+..+. +.+.|- T Consensus 316 ddrk~msMlEDyWLpRReGgrgTEItTLpGgqnlgem---~DV~YF~kkLy~aLnVP~SRl~~e~~~~~~~Gr~~EItRD 392 (516) T protein:vir:10 316 NQKRNLSMTEDYWLMRRDGKSVTEVTSLPGAQTMGEM---DDVRWFNKKLYEALRIPLSRMPRDDGGMVIGGQDMAITRD 392 (516) T ss_pred cchhhhhhHhhhcccccCCCcccceeeccccCCcChH---HHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHH Confidence 1 1111122 24677777753 33344 44456778899999999999964332 222221 Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHhhccC-----ccchhh----hhhhhcccc---------hhHHHHHHHHHHH--hCC Q lcl|Aclame:pro 290 --LMEDYVTNDLPFYFDAITSELGLKTLN-----DKDRRL----YHIEFDTRS---------VTGRNVDEIVKLV--NNQ 347 (406) Q Consensus 290 --~~~~~~~~~i~P~~~~ie~~l~~~l~~-----~~~~~~----~~~~~~~~~---------~~~~~~~~~~~~~--~~g 347 (406) ....|+..-=.-+...+.+.|.+.|+. ..++.. +.++|..+. .+..|+..+..+- -+. T Consensus 393 EiKF~KFI~rLR~rFs~lF~~~L~~qLilKgIit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGk 472 (516) T protein:vir:10 393 ELDFRKFIVQLQHNFEEIFLDPLKTNLIYKKIILESEWEEQINNIKVNFHQDSYYTELKDIETLRQRVDALSQIEPYVGK 472 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcc Confidence 112333332233334555555554433 333322 223332221 2334444444332 345 Q ss_pred CcCHHHHHHH-hCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCc-cCCCCCCC Q lcl|Aclame:pro 348 ILTPNQGLVE-LGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE-VNAEEDKS 406 (406) Q Consensus 348 ~~t~NE~R~~-~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~-~~~~~~~~ 406 (406) +++.+=+|+. |.+.-.+-..-+ ..-....+.|- .+-++..+ T Consensus 473 y~s~~yi~k~ILr~tDeei~~~~------------------k~I~~E~~~~~~~~p~~e~~ 515 (516) T protein:vir:10 473 YVSHDYVMKNILQMTDEQIAQEE------------------KQIEKEANVKRFQNPENEDD 515 (516) T ss_pred ccchHHHHHHHhcCCHhHHHHHH------------------HHHHHhhhCCCCCCCCcccc Confidence 7777777754 344311000000 00000111110 00000111 No 233 >protein:vir:102668 Length: 547 # NCBI annotation: Hypothetical protein # Family: family:all:481 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024419;genbank:gi:48696640;genbank:GeneID:2948135 Probab=85.43 E-value=0.053 Score=27.58 Aligned_cols=357 Identities=8% Similarity=0.026 Sum_probs=158.7 Q ss_pred Ccc------cccccCCCCcchhhHHHh---hcCC--------ccc-ccc--hhhhhccHHHHHHHHHHHHhhcc------ Q lcl|Aclame:pro 1 MSF------FQPLGTSKVSYDDYISSV---LAGD--------VSQ-KYL--GVSALKNSDILTATSIIAGDIAR------ 54 (406) Q Consensus 1 M~~------f~~~~~~~~~~~~~~~~~---~~~~--------~~~-~~~--~~~a~~~~~v~~~i~~ia~~ia~------ 54 (406) |.- |+.+++.+.++...+.+. .-.. ... ... ...-+-.++...|++.+|..+-+ T Consensus 1 ~~~~~l~~r~~~l~~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~~~~~~~~i~dst~~~a~~~Las~L~~~ltPp~ 80 (547) T protein:vir:10 1 MENSKIVKRLDFLKTDRKNVEQIWDCIRKYIMPMRSDFFSDLRSEGSINWNQNREVFDSTAGDGLETLSSSLHGSLTSPA 80 (547) T ss_pred CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccccccCCCCCcccccccccccccchHHHHHHHHHHHHHHhhcCCC Confidence 442 344445555555433222 1110 000 000 01111234555666666655433 Q ss_pred ceeEEEec-CCcccccchHHHHhhh------hccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeE Q lcl|Aclame:pro 55 FPLVKKDV-NGDIIHDEDINYLLNV------KSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSET 127 (406) Q Consensus 55 ~~~~~~~~-~~~~~~~~~~~~lL~~------~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~ 127 (406) -||.-... +.+......+...|.. .--..-+.+.-+..++.++.++|++..++..+........+..++...+ T Consensus 81 ~~WF~l~~~d~~~~~~~~v~~~L~~ve~~i~~~l~~snf~~~~~~~~~~L~~~G~a~l~~~~d~~~~~~~r~~~~pl~~~ 160 (547) T protein:vir:10 81 TKWFELAFRDKELNSDDECRKWLENATHDVYSALQDSNFNLEANETYIDLCGYGNAIMVEEEDEDEEGSVVFQSSPIQDS 160 (547) T ss_pred CcccccccCCccccchHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhHCcEeEEeccCCCCCCceeEEEeecceE Confidence 24533322 2221111111111110 0111123455566778999999999999876643223334545555566 Q ss_pred EEEEccCcceEEEEE-------------------------------------------ee-------------------- Q lcl|Aclame:pro 128 TVEETDNHEIVYTFT-------------------------------------------DM-------------------- 144 (406) Q Consensus 128 ~~~~~~~g~~~~~~~-------------------------------------------~~-------------------- 144 (406) .+..+..|++.-.+. .. T Consensus 161 ~v~~d~~G~v~~i~r~~~~t~~qi~~~fg~~~l~~~v~~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~p 240 (547) T protein:vir:10 161 YFEEDSRGQVVNFYRVFRWTPAQIYDRFGDEGTPEAIIKKAKEASNQAALKQEVVMCVFTRYDKKQNRNAGTVLAPTERP 240 (547) T ss_pred EEeeCCCcCeeeeeeeeeccHHHHHHhcCcccCCHHHHHHHhcCCCcccceEEEEEEEeeccCCCCCccccceeeccccc Confidence 555665554321110 00 Q ss_pred -------cCCeEEE-----EcceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCC Q lcl|Aclame:pro 145 -------LTAKQVK-----CFAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQL 211 (406) Q Consensus 145 -------~~g~~~~-----~~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~ 211 (406) ..+.... |..-..+.+|+...+ ..||.||.+-+...+...+.+.+.......-...|.+.+...+.. T Consensus 241 ~~s~~~e~~~~~~~l~esg~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~pp~~v~~~g~~ 320 (547) T protein:vir:10 241 FGKKWILKEGAVQLGEEGGYYEMPAYAIRWRKSAGSQWGFGPSHLALPDVLTANRYVELVLRSSEKVIDPAIMVTERGLI 320 (547) T ss_pred eeEEEEEecCceeeeecCCcccCCeeeeeeeecCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccccccc Confidence 0000000 000112333333223 489999999999999999999998888887777777665543333 Q ss_pred CHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHH-HHHHHHHHHHHHHHhcCCHHHhcccccchhHHH- Q lcl|Aclame:pro 212 SGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQL-ITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQ- 289 (406) Q Consensus 212 ~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~-~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~- 289 (406) .+ ++ .+ .|++.+.+..-.++++...+ +++. .+..+..+..|-.+|-+....+-... .-+.++ T Consensus 321 ~~---------~~---~~--pgg~~~~~~~~~v~pl~~~~-~~~~~~~~i~~~~~rI~~af~~d~~~~~~~~-~~TAtEV 384 (547) T protein:vir:10 321 SD---------ID---LG--ASGLTVVRDMESMKPFESRA-RFDVSSIQLTDLRSAVRRIYYVDQLQMKDSP-AMTATEV 384 (547) T ss_pred cc---------ce---ec--CCeeeecCCcccceeeeccc-chHHHHHHHHHHHHHHHHHhhhhhhhcCCCc-cccHHHH Confidence 21 11 11 23455566666777776554 3443 45667778889999987654442222 122222 Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC- Q lcl|Aclame:pro 290 -LMEDYVTNDLPFYFDAITSELGLKTLNDKDRRLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPN- 367 (406) Q Consensus 290 -~~~~~~~~~i~P~~~~ie~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~- 367 (406) ++..=....|.|....+.++|-.-|+. +. +..+...|. +||+|.+- T Consensus 385 ~~r~~E~~~~LG~v~~rl~~E~l~Pli~---r~------------------~~il~r~g~-----------lP~~p~~l~ 432 (547) T protein:vir:10 385 QVRYELMQRLLGPTLGRLENDFLSPMIQ---RT------------------FNIRFRAGK-----------LGELPSKLL 432 (547) T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHH---HH------------------HHHHHhcCC-----------CCCCchhhh Confidence 233445667778887777776432221 00 011222333 23332221 Q ss_pred ---CCeeeeccCccchhhccccc--------cccCcccCC-Ccc---CCCCCCC Q lcl|Aclame:pro 368 ---MDRYQSSLNYVFLDKKEEYQ--------DKVGIKGKG-GEV---NAEEDKS 406 (406) Q Consensus 368 ---gd~~~~~~n~~~~~~~~~~~--------~~~~~~~~g-g~~---~~~~~~~ 406 (406) +..+-+. -..|+....... ........+ +.+ .=+-|+= T Consensus 433 ~~~~~~~~v~-~is~Laraq~~~~~~~i~~~~~~v~~laq~~P~vld~id~d~~ 485 (547) T protein:vir:10 433 ESGKAAMDIV-YTGPLSRAQKIDQAASIERWAGSTAQLAEINPEVLDIPDWDEM 485 (547) T ss_pred ccCcceEEEE-eccHHHHHHHHHHHHHHHHHHHHHHHhhccChhhhhcCCHHHH Confidence 1111111 111222110000 000000000 000 0000000 No 234 >protein:vir:95149 Length: 501 # NCBI annotation: hypothetical protein ORF007 # Family: family:all:584 # MgeID: mge:1552 # MgeName: PA73 # Cross-refs: genbank:acc:YP_001293414;genbank:gi:148912835;genbank:GeneID:5228224 Probab=85.27 E-value=0.054 Score=27.53 Aligned_cols=383 Identities=10% Similarity=-0.006 Sum_probs=148.6 Q ss_pred Ccccccc--c-CCCCcchhhHHHhhcCCcc------cccc--------hh----------hhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MSFFQPL--G-TSKVSYDDYISSVLAGDVS------QKYL--------GV----------SALKNSDILTATSIIAGDIA 53 (406) Q Consensus 1 M~~f~~~--~-~~~~~~~~~~~~~~~~~~~------~~~~--------~~----------~a~~~~~v~~~i~~ia~~ia 53 (406) |.--+.+ . ..-.+.=..+.....|... .++. .+ .|.-.+.+...++.+...+- T Consensus 1 m~~V~~~hp~y~~~~~~W~~ird~~~G~~~~r~~g~~YLP~~~~e~~~~e~~~~Y~~rl~rA~~~n~~~~t~~~l~G~vf 80 (501) T protein:vir:95 1 MPNVSFIRPELGKLLPLYYLIRDAIAGEPTVKGARTTYLPMPNAEDQSKENKARYEAYLKRAVFYNVARRTLFGLVGQVF 80 (501) T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcChHHHHhcccccCcCCCCCCCcccchHHHHHHhhccccCchHHHHHHHHhhhhh Confidence 7732111 1 1111111112233332211 0110 00 01112223334444443433 Q ss_pred cceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc--------------eeEEE Q lcl|Aclame:pro 54 RFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN--------------QALQF 119 (406) Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g--------------~~~~l 119 (406) +-|..+ ..+..+..++..-=-...+-.+|.+.++...+.+|-+++++......+ +|. + T Consensus 81 ~k~p~~-------~~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~~~~t~a~~~~~~~rPy-~ 152 (501) T protein:vir:95 81 MRDPVV-------KVPALLNPLVANATGSGINLTQLAKRAVSLNLAYSRAGLLVDYPTTEAEGGASIADLEAGRIRPT-L 152 (501) T ss_pred cCCcce-------eCcHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeecCCCCcccccHHHHHhccCCcE-E Confidence 333322 123445555432222455778999999999999999999887653322 122 2 Q ss_pred eecCCeeEEE--------------------EEc-------------------cCcceEEEEEeecCCe------------ Q lcl|Aclame:pro 120 QFYRPSETTV--------------------EET-------------------DNHEIVYTFTDMLTAK------------ 148 (406) Q Consensus 120 ~~l~p~~~~~--------------------~~~-------------------~~g~~~~~~~~~~~g~------------ 148 (406) ..+.|..+-- ... .+|...+.++...... T Consensus 153 ~~~~~~~IinW~~~~v~g~~~l~~v~l~E~~~~~d~~f~~~~~~q~RvL~~~~~g~~~~~v~r~~~~~~~~~~~~~~~~~ 232 (501) T protein:vir:95 153 YVYSPTEIINWRTTDRGAEEVLSLVVLFETWCAADDGFEMKTSGQFRVLRLDEEGYYVHEIWREPQPTKADGSKIPKGNY 232 (501) T ss_pred EEecHhhhcCcceeccCCceeeeEEEEEEEEeecCCCcccceeEEEEEEeeCCCceEEEEEEEecCCcccCcceecCCcc Confidence 2222211100 000 1111111111110000 Q ss_pred -----EE-------EEcceeeEeeccCCCCCccccCHHHHHHHH-HHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHH Q lcl|Aclame:pro 149 -----QV-------KCFAHDVIHWKFFSHDTILGRSPLLSLGDE-IDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDA 215 (406) Q Consensus 149 -----~~-------~~~~~~vih~r~~~~~~~~G~s~~~~~~~~-i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~ 215 (406) .. .+..=.++++-..+.....+.+|+..++.. |........+... +...+.|-.+++. ++++. T Consensus 233 ~~~~~~~~~~~g~~~l~~IPfv~~~~~~~~~~~~~pPLl~lA~lni~hy~~ssd~~~~-l~~~~~P~l~i~G---~~~~~ 308 (501) T protein:vir:95 233 QQYVVYKPTDAQGKRLTEIPFMFIGSENNDSNPDNPNFYDLASLNMAHYRNSADYEES-CYIVGQPTPVLIG---LTEEW 308 (501) T ss_pred cccceeeeeccCCCcCCeeeEEEEecCCCCCCCCccchHHHHHHHHHHHhhhhHHHHH-HHHcccceeeeeC---Ccccc Confidence 00 000000111111111223466777665533 3344443443333 4444556555542 12111 Q ss_pred HHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHH--HHHHH Q lcl|Aclame:pro 216 RQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVA--QLMED 293 (406) Q Consensus 216 ~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~--~~~~~ 293 (406) .+...+ ....-|.++ .+.++.|.++.=+..+++-+. .+..+....++.. .| ..++-......+.+ ..... T Consensus 309 ~~~~~~--~~i~~G~~~--~~~lP~~~~~~~ie~~~~~i~-~~~l~~l~~~m~~-~G--a~ll~~~~~~~Ta~~~~~~~~ 380 (501) T protein:vir:95 309 VTNVLK--GSVNFGSRG--GIPLPVGADAKLLQASENTML-KEAMDTKERQMVA-LG--AKLVEQKEVQRTATEAELEAA 380 (501) T ss_pred cccCCC--Cceeecccc--cccCCCCCceeEEecChhhHH-HHHHHHHHHHHHH-HH--HhhccCCccchhHHHHHHHHH Confidence 111100 012224332 456666655544444443332 2222222233322 22 12332211111111 22223 Q ss_pred HHHHHHHHHHHHHHHHHHhhcc------Ccc-ch--hhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 294 YVTNDLPFYFDAITSELGLKTL------NDK-DR--RLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKST 364 (406) Q Consensus 294 ~~~~~i~P~~~~ie~~l~~~l~------~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~ 364 (406) -.+..|.-++.++|+.+++.|- ... +. ..+.-+|.........++++.++++.|.++....++.+-.--+. T Consensus 381 ~~~S~L~~~a~~le~al~~~l~~~a~w~g~~~~~~~v~i~~df~~~~~~~~~~~al~~~~~~G~is~~t~~~~L~~~~v~ 460 (501) T protein:vir:95 381 SEGSTLSSATKNVSAAFEWALKWAARWVGQADSGVKFELNTDFDIARMTPDERRSLVEEWQKGAITFEEMRTGLRKAGVA 460 (501) T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEecccccccCCHHHHHHHHHHHhCCCCcHHHHHHHHHhCCCC Confidence 3356778888889998887552 111 11 11333444444456668888899999999999988777333332 Q ss_pred CCCCCee--eeccCccchhhccccccccCcccCCCccCCCCC Q lcl|Aclame:pro 365 DPNMDRY--QSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEED 404 (406) Q Consensus 365 ~~~gd~~--~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~ 404 (406) .+.-+.- .+-....+.+....... .....-||++=++.. T Consensus 461 ~~~~~~e~e~i~~~~~~~~~~~~~~~-~~~~~~gg~~~~~~~ 501 (501) T protein:vir:95 461 TEDDSKAKEKIAKDTAEAMALATPAN-VPGDGSGGDNVGNSE 501 (501) T ss_pred ChhHHHHHHHHHhhhcCcccccccCC-CCCCCcccccccCCC Confidence 2110000 00000001111111111 122233444412222 No 235 >protein:vir:102330 Length: 451 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529555;genbank:gi:90592641;genbank:GeneID:3974462 Probab=85.21 E-value=0.054 Score=27.51 Aligned_cols=364 Identities=11% Similarity=0.010 Sum_probs=154.8 Q ss_pred Cc------ccccccCCCCcchhhHHHhhcCCc--------------ccccchhhhhccHHHHHHHHHHHHhhccceeEEE Q lcl|Aclame:pro 1 MS------FFQPLGTSKVSYDDYISSVLAGDV--------------SQKYLGVSALKNSDILTATSIIAGDIARFPLVKK 60 (406) Q Consensus 1 M~------~f~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 60 (406) |. |.+....+ ...-........|.. .....+..-+.+.-..-.|+..+.-+-.-|+... T Consensus 1 l~~~~i~~~i~~~~~~-~~r~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~~yl~G~p~~~~ 79 (451) T protein:vir:10 1 MELEKIRAIISADAAR-RQEILQAKSYYYNKNDILKKGVVVQNRDENPLRNADNRISHNFHEILVDEKASYMFTYPVLFD 79 (451) T ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHhcccCccccccccccccccccccccccccccchHHHHHHhhhhheecccceee Confidence 11 11100000 000000111111110 0000011111223344556666666666666442 Q ss_pred ecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC-------ceeEEEeecCCeeEEEEEcc Q lcl|Aclame:pro 61 DVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKT-------NQALQFQFYRPSETTVEETD 133 (406) Q Consensus 61 ~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~-------g~~~~l~~l~p~~~~~~~~~ 133 (406) ..+ .. ....+|..- -..........+....+.+|.||.++.++... | ...+..++|..+.+.+++ T Consensus 80 ~~~-~~----~~~~~~~~~--~~n~~~~~~~~~~~~~~~~G~a~~~~y~de~~~~~~~~~~-~~~~~~i~p~~~~~vydd 151 (451) T protein:vir:10 80 IDN-NK----ELNEKVTDV--LGNEFTRKAKNLAIEASNCGSAWLHYWIDEEYSGEQVTNQ-TFKYGVVNTEEIIPIYRN 151 (451) T ss_pred cCC-cH----HHHHHHHHH--hccCHHHHHHHHHHHHhhcCeEEEEEeecCCccccccccc-ceeEEEEcccceEEEEcC Confidence 222 11 112222210 01234567777889999999999988776431 2 234666788888777654 Q ss_pred C--cceEEEE----E-eecCCe--------EEEEcceeeEeeccC----------------CC---------CCccccCH Q lcl|Aclame:pro 134 N--HEIVYTF----T-DMLTAK--------QVKCFAHDVIHWKFF----------------SH---------DTILGRSP 173 (406) Q Consensus 134 ~--g~~~~~~----~-~~~~g~--------~~~~~~~~vih~r~~----------------~~---------~~~~G~s~ 173 (406) . +.+.+.+ . ....+. ...+.++.+.+++.. +. +...|.|- T Consensus 152 ~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~~d 231 (451) T protein:vir:10 152 GIERELEAVIRYYIQLEDVKGQIQKQAYTYVEFWTDKILDKYKFFGVSCCGSQIEHITVQHRFNSVPFVEFSNNIKKQSD 231 (451) T ss_pred CCCCceEEEEEEEEeeecccccccceEEEEEEEEeCCeEEEEEecccCccccccccccccCCCCeeeEEEeccCCCCCCc Confidence 3 2332211 1 111111 112344444444310 00 12236677 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecC-CCCHHHHHHHHHHHHHHhcccccCceeecc-----CCceeeec Q lcl|Aclame:pro 174 LLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGA-QLSGDARQRARQEFEKMREGSVGGSPLVFD-----STMEYTPL 247 (406) Q Consensus 174 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~-----~g~~~~~l 247 (406) ++.+...++..+.+.....+.+...+.|-.++..-. ....+... .++. .+++.+. .|.++.-+ T Consensus 232 ~e~v~~liDa~~~~~S~~~~~~~~~~~~~l~~~g~~~~~~~~~~~----~~~~-------~~~i~~~~~~~~~~~~~~~l 300 (451) T protein:vir:10 232 LSKYKKILDLYDRVMSGFANDLEDIQQIIYILENFGGEDTSEFLK----ELKR-------YKTIKTETDSEGDSGGLKTM 300 (451) T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccceeeeecCCcccchhhHH----HHhh-------CCeEEecCcCCccCCcceEE Confidence 777777777666655555555555455544444221 12222222 1111 1222222 23333444 Q ss_pred cCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchh------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 248 EIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQS------------VAQLMEDYVTNDLPFYFDAITSELGLKTL 315 (406) Q Consensus 248 ~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n------------~~~~~~~~~~~~i~P~~~~ie~~l~~~l~ 315 (406) +.......+....+...+.|+..-++|..-....++-|. .....+..+..+|.-+++.|...+. T Consensus 301 ~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~gn~Sg~Alk~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~---- 376 (451) T protein:vir:10 301 QIEIPTEARKIILEILKKQIYESGQGLQQDTENFGNASGVALKFFYRKLELKSGLLETEFRTSFDKLIKAILYFLG---- 376 (451) T ss_pred eecCCHHHHHHHHHHHHHHHHHHhCcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---- Confidence 433344445666777788888888888432211111111 1222334444555555555554443 Q ss_pred Cccchhhhhhhh--cccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeeccCccchhhccccccccCcc Q lcl|Aclame:pro 316 NDKDRRLYHIEF--DTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIK 393 (406) Q Consensus 316 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~ 393 (406) ..+...+.+.| ....+..+.++.+.+++ |+++..-+.++++.-.-+.+.. .-+......+.+...+ T Consensus 377 -~~d~~~i~i~f~~~~p~n~~e~~~~~~kl~--g~iS~et~~~~~p~v~d~~~e~---------~~~~ee~~~~~~~~~~ 444 (451) T protein:vir:10 377 -VTDYKKIQQTYTRNMMSNDLEDADIATKSV--GIIPTKIILRHHPWVDDVEEAE---------KLYLEEKKIQASKVSD 444 (451) T ss_pred -CCCccceeEEecCCCCCCHHHHHHHHHHHh--ccCchHHHHHhCCCCCCHHHHH---------HHHHHHHHHHHHHHHh Confidence 12222333334 34456677777777774 7889888887774432111000 0010000000000111 Q ss_pred cCCCccC Q lcl|Aclame:pro 394 GKGGEVN 400 (406) Q Consensus 394 ~~gg~~~ 400 (406) .-++-+| T Consensus 445 ~~~~~~~ 451 (451) T protein:vir:10 445 DYNNFTE 451 (451) T ss_pred hcCCCCC Confidence 1111111 No 236 >protein:vir:2198 Length: 536 # NCBI annotation: head-tail connector protein # Family: family:all:481 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_041995;swissprot:sw:p03728;genbank:gi:9627467;goa:P03728;uniprot:P03728;genbank:GeneID:1261033 Probab=84.31 E-value=0.061 Score=27.23 Aligned_cols=385 Identities=8% Similarity=0.021 Sum_probs=147.0 Q ss_pred Ccc-------------cccccCCCCcchhhHHHhh---cCC-----cccccchhhhhccHHHHHHHHHHHHhhcc-c--- Q lcl|Aclame:pro 1 MSF-------------FQPLGTSKVSYDDYISSVL---AGD-----VSQKYLGVSALKNSDILTATSIIAGDIAR-F--- 55 (406) Q Consensus 1 M~~-------------f~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~a~~~~~v~~~i~~ia~~ia~-~--- 55 (406) |.= |+.+++.+.++...+.+.. -.+ ....-....-.-.++.-.|++.+|..+.+ + T Consensus 1 m~~~~~~~~~~~~~~r~~~lk~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~~~~dst~~~a~~~Laa~l~~~ltP~ 80 (536) T protein:vir:21 1 MAEKRTGLAEDGAKSVYERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTDYQTPWQAVGARGLNNLASKLMLALFPM 80 (536) T ss_pred CcchhhchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccCCCCCcccccccccccccHHHHHHHHHHHHHHhhcCC Confidence 432 3333344444443322221 111 00000000112234445566666555433 2 Q ss_pred -eeEEEecCC-c----c-------cccchH---HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc-eeEE Q lcl|Aclame:pro 56 -PLVKKDVNG-D----I-------IHDEDI---NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN-QALQ 118 (406) Q Consensus 56 -~~~~~~~~~-~----~-------~~~~~~---~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g-~~~~ 118 (406) ||.-..... . . .....+ .+.+.. --..-+.+.-+..+..++.++||+..|+..+...+ .... T Consensus 81 ~~WFrl~~~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~~-~l~~snf~~~~~~~~~~L~~~G~a~ly~~e~~~~~~~~f~ 159 (536) T protein:vir:21 81 QTWMRLTISEYEAKQLLSDPDGLAKVDEGLSMVERIIMN-YIESNSYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMK 159 (536) T ss_pred CcccccccChhhhhccccchhhHHHHHHHHHHHHHHHHH-HHHhcCcHHHHHHHHHHHHhHCcEeEEEeeCCCCceeeEE Confidence 453322111 0 0 000111 112211 11123455566677888889999999987654322 2234 Q ss_pred EeecCCeeEEEEEccCcceEEE------------------------------------EE-eecCCeEEE---------E Q lcl|Aclame:pro 119 FQFYRPSETTVEETDNHEIVYT------------------------------------FT-DMLTAKQVK---------C 152 (406) Q Consensus 119 l~~l~p~~~~~~~~~~g~~~~~------------------------------------~~-~~~~g~~~~---------~ 152 (406) .+|+ ..+.+..+..|++.-. .. ....+..+. + T Consensus 160 ~~pl--~~~~v~~d~~G~vd~i~r~~~~t~~~l~~~fg~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~e~~g~~v 237 (536) T protein:vir:21 160 LYRL--SSYVVQRDAFGNVLQMVTRDQIAFGALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEDSGEYLRYEEVEGMEV 237 (536) T ss_pred EEEc--CeEEEeeCCCCCeeEEeeeeeccHHHHHHhhhhhhcccccccccccceeEEEEEEEecCCCcEEEEeccCCeee Confidence 5555 3444444444432111 11 110110110 0 Q ss_pred ---------cceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHH Q lcl|Aclame:pro 153 ---------FAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQE 222 (406) Q Consensus 153 ---------~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~ 222 (406) ..-..+.+|+...+ ..||.||.+-+...+...+.+.+.......-...|...+...+...++.. T Consensus 238 ~~~~g~~~f~~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~~------ 311 (536) T protein:vir:21 238 QGSDGTYPKEACPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRL------ 311 (536) T ss_pred ccccCccccccCCeeeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCcccccchhhh------ Confidence 01122334433233 48999999999999999999988888866555566555554443332211 Q ss_pred HHHHhcccccCcee-eccCCceeeeccCChhHHH-HHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHH---------- Q lcl|Aclame:pro 223 FEKMREGSVGGSPL-VFDSTMEYTPLEIDTNVLQ-LITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQL---------- 290 (406) Q Consensus 223 ~~~~~~g~~~~~~~-vl~~g~~~~~l~~~~~d~~-~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~---------- 290 (406) ..+.+ |.++ -..+.+...++...+ +++ ..+..+..+..|..+|-+.. +....+..-+.++- T Consensus 312 ----~~~~~-g~~v~g~~~~v~~~~~~~~~-~~~~~~~~i~~~~~rI~~af~~~~-l~~~~~~r~TAtEV~~r~~E~~~~ 384 (536) T protein:vir:21 312 ----TKAQT-GDFVTGRPEDISFLQLEKQA-DFTVAKAVSDAIEARLSFAFMLNS-AVQRTGERVTAEEIRYVASELEDT 384 (536) T ss_pred ----ccCCC-cceecCCcccceeeeccccc-cchHHHHHHHHHHHHHHHHHhhhh-cccCCCCCccHHHHHHHHHHHHHH Confidence 11111 1111 122334444544333 333 33556677778888886542 11111111122111 Q ss_pred ----HHHHHHHHHHHHHHHHHHHHH-hhccCccchhhhhhhhccc--ch-----hHHHHHHHHHHHhCC------CcCHH Q lcl|Aclame:pro 291 ----MEDYVTNDLPFYFDAITSELG-LKTLNDKDRRLYHIEFDTR--SV-----TGRNVDEIVKLVNNQ------ILTPN 352 (406) Q Consensus 291 ----~~~~~~~~i~P~~~~ie~~l~-~~l~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~g------~~t~N 352 (406) ...+....+.|++...-..+. ..++++.....+.+++... .. .+.....+..+.+.+ .+..+ T Consensus 385 LG~v~~rl~~Ell~Pli~r~~~il~r~g~lP~~p~~~v~~~~vs~l~~l~r~~~~~~l~~~~~~la~~~Pe~ld~~id~d 464 (536) T protein:vir:21 385 LGGVYSILSQELQLPLVRVLLKQLQATQQIPELPKEAVEPTISTGLEAIGRGQDLDKLERCVTAWAALAPMRDDPDINLA 464 (536) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCChhhccceEEecHHHHHHHHHHHHHHHHHHHHHhhchhhhcccCCHH Confidence 123445555666655444442 2344433333333333221 11 111111111111111 12333 Q ss_pred HHH----HHhCCCCCCCCCCCeeeeccCccchhhc-c-cccc---------ccCcccCCCc------cCCCCCCC Q lcl|Aclame:pro 353 QGL----VELGKQKSTDPNMDRYQSSLNYVFLDKK-E-EYQD---------KVGIKGKGGE------VNAEEDKS 406 (406) Q Consensus 353 E~R----~~~g~~p~~~~~gd~~~~~~n~~~~~~~-~-~~~~---------~~~~~~~gg~------~~~~~~~~ 406 (406) ++- +.+|.+|.. .+..+.-...+-.. . ..+. ....+..++. -|..+-+- T Consensus 465 ~~~~~~a~~~Gv~p~~-----~irt~eev~~~r~q~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 534 (536) T protein:vir:21 465 MIKLRIANAIGIDTSG-----ILLTEEQKQQKMAQQSMQMGMDNGAAALAQGMAAQATASPEAMAAAADSVGLQP 534 (536) T ss_pred HHHHHHHHHcCCChhh-----hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhHHhhhhccccCC Confidence 322 334553320 01111000000000 0 0000 0000011110 01111111 No 237 >protein:vir:104892 Length: 558 # NCBI annotation: T4-like capsid assembly protein # Family: family:all:1036 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214363;genbank:gi:61806003;genbank:GeneID:3294412 Probab=83.76 E-value=0.066 Score=27.06 Aligned_cols=397 Identities=12% Similarity=0.038 Sum_probs=160.1 Q ss_pred Ccccc----cccCCCCcc-----hhhHHHhhcCC-cccccch--------------hhhhccHHHHHHHHHHHHhhccc- Q lcl|Aclame:pro 1 MSFFQ----PLGTSKVSY-----DDYISSVLAGD-VSQKYLG--------------VSALKNSDILTATSIIAGDIARF- 55 (406) Q Consensus 1 M~~f~----~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~--------------~~a~~~~~v~~~i~~ia~~ia~~- 55 (406) |||.= ++..+..++ ++....+..++ .+.++.- ++.+.+|.|.+||+-|.+.+.-+ T Consensus 5 fgf~~~~~~~~~~~~~s~~~p~~ddg~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~pEvd~Av~eIVneaiv~d 84 (558) T protein:vir:10 5 FGFSIEETQKKSTSIISPVPKNNEDGVDNFISSGFYGQYVDIEGAYRSEYDLIRRYREMALHPEADGAIEDVVNEAIVSD 84 (558) T ss_pred hcchhhhhhhhccCCccccCCCccccccceeccceeeeeecccchhhhHHHHHHHHHHHhhccchhhHHHHhhcceeEec Confidence 55541 122221121 11121221111 1222210 12467899999999999887654 Q ss_pred ----eeEEEecCCc------ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC--CceeEEEeecC Q lcl|Aclame:pro 56 ----PLVKKDVNGD------IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK--TNQALQFQFYR 123 (406) Q Consensus 56 ----~~~~~~~~~~------~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~--~g~~~~l~~l~ 123 (406) |+.+.=.+.+ ........++|+. -+-... -..++..|.+.|..|..++.|.. ..-+.++..|+ T Consensus 85 ~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~l-l~F~~~----~~e~fR~WYVDgRiyfHKiid~k~pk~GI~ELr~lD 159 (558) T protein:vir:10 85 LYDSPVEVELSNLNASNTLKKKIREEFRYIKEM-MDFDKK----SHEIFRNWYVDGRVFYLKVIDTKNPQEGIQDLRYID 159 (558) T ss_pred CCCceEEEEecccCcchHHHHHHHHHHHHHHHH-hccchh----hhHHHhhheeeeEEEEEEEEeCCCccccceeeeeeC Confidence 3333211111 1111233333331 222333 34456677889999988877644 23588999999 Q ss_pred CeeEEEEEcc----------------Cc-----c-eEEEEEee------------cCCeEEEEcceeeEeecc--CCCCC Q lcl|Aclame:pro 124 PSETTVEETD----------------NH-----E-IVYTFTDM------------LTAKQVKCFAHDVIHWKF--FSHDT 167 (406) Q Consensus 124 p~~~~~~~~~----------------~g-----~-~~~~~~~~------------~~g~~~~~~~~~vih~r~--~~~~~ 167 (406) |..++.++.- .+ . ..|+++.. ..+...+++.+-|.+... ...++ T Consensus 160 Pr~i~~Vr~i~~~~~~~~~~~~~~~~~~~~~~~~~~eyy~Y~~~~~~~~~~~~~~~~~~~vkI~~dAI~y~hSGL~d~~~ 239 (558) T protein:vir:10 160 PLKIKFIRQEKRKPGNQDPAIRVRSEQDVVPNPEFEEFYIYTPKVQHPTGMVGQMGGKNSIKIAKDSITMCTSGLVDRNK 239 (558) T ss_pred cccceeeeeeccccccccceeeeecccceeeccceeEeeeecCCcccccccceeecCCCceeechhheeeecccceecCC Confidence 9998664432 01 0 01111111 112223444443333221 12233 Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHh---------ccc---ccCc Q lcl|Aclame:pro 168 ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMR---------EGS---VGGS 234 (406) Q Consensus 168 ~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~---------~g~---~~~~ 234 (406) -.-+|-+..|...+....-+.....-+-=..++-+-++ .-.+.+-+...++....+-..+ +|. +... T Consensus 240 ~~i~syLhkAIKp~NQLkmlEDAlVIYRitRAPERRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddrk~ 319 (558) T protein:vir:10 240 NRVLSYLHKAIKALNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKVKAEQYLKEVMSRYRNKLVYDANTGEVRDDRKF 319 (558) T ss_pred CeeeecchHhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccchh Confidence 33456777777777666666655554432333333333 3334444433444333333222 221 1111 Q ss_pred eeec----------cCCceeeeccC--ChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccc---hhHHHH-HHHHHHHH Q lcl|Aclame:pro 235 PLVF----------DSTMEYTPLEI--DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPN---QSVAQL-MEDYVTND 298 (406) Q Consensus 235 ~~vl----------~~g~~~~~l~~--~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~---~n~~~~-~~~~~~~~ 298 (406) ...+ ..|.+++.|.- +..+|+ -.++..+.+.++++||.+-|+..+.. .+.|=. .+.=++.. T Consensus 320 msMlEDyWLpRReGgrgTEItTLpGgqnLgem~---DV~YF~kKLy~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~KF 396 (558) T protein:vir:10 320 MSMMEDFWLPRREGGRGTEITTLPGGQNLGELS---DVDYFQKKLYRALGVPESRIAAEGGFNLGRSSEILRDELKFAKF 396 (558) T ss_pred hhhHhhhcccccCCCCccceeeccccCCcchHH---HHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHHHH Confidence 2222 24677777753 333443 44567788999999999999754322 111111 11222333 Q ss_pred HHHHHHHH----HHHHHhhccC-----ccchh----hhhhhhcccc---------hhHHHHHHHHHHHh--CCCcCHHHH Q lcl|Aclame:pro 299 LPFYFDAI----TSELGLKTLN-----DKDRR----LYHIEFDTRS---------VTGRNVDEIVKLVN--NQILTPNQG 354 (406) Q Consensus 299 i~P~~~~i----e~~l~~~l~~-----~~~~~----~~~~~~~~~~---------~~~~~~~~~~~~~~--~g~~t~NE~ 354 (406) |.-+-..+ .+-|...|+. ..++. .+.++|..+. .+..|+..+..+-. +-.++.+=+ T Consensus 397 I~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~dyi 476 (558) T protein:vir:10 397 VGRLRKRFAAMFNDMLKTQLVLKNIVTPEDWKTMEDHIQYDFLYDNQFAELKESELMEGRLGMLATIEPYIGKYYSTEYV 476 (558) T ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchHHH Confidence 44444444 4444444332 23332 2223332211 22334444332211 112333333 Q ss_pred HH-------------------HhCCCCCCCCCCCeeeeccCccchh-hcc-----c-cc--cccCcccCCCccCCCCCCC Q lcl|Aclame:pro 355 LV-------------------ELGKQKSTDPNMDRYQSSLNYVFLD-KKE-----E-YQ--DKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 355 R~-------------------~~g~~p~~~~~gd~~~~~~n~~~~~-~~~-----~-~~--~~~~~~~~gg~~~~~~~~~ 406 (406) |+ +..-+.+++|....... +...|-. ... . +. ....++.+.+..-+.+-+- T Consensus 477 ~k~ILr~tDeeI~~~~kqI~~E~k~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (558) T protein:vir:10 477 RKRVLRQTDMEIEEIDTQIEDEIQKGIIPDPSQIDPIT-GEPLPQEGDPAMEGMGEQPVDPDLEAQAQAVDAQYSKDTKK 555 (558) T ss_pred HHHHhccCHHHHHHHHHHHHHHHhCCCCCCccccChhh-ccccCccCCchhccCCCCCcccccccchhhhhhhhhhhhhh Confidence 21 12222222222111110 0001100 000 0 00 0000111111111111111 No 238 >protein:vir:80453 Length: 535 # NCBI annotation: BcepGomrgp05 # Family: family:all:584 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210225;genbank:gi:146329917;genbank:GeneID:5123562 Probab=82.58 E-value=0.076 Score=26.73 Aligned_cols=386 Identities=8% Similarity=-0.044 Sum_probs=144.6 Q ss_pred Cccccccc---CCCCcchhhHHHhhcCCcc-----c-cc--------chh----------hhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MSFFQPLG---TSKVSYDDYISSVLAGDVS-----Q-KY--------LGV----------SALKNSDILTATSIIAGDIA 53 (406) Q Consensus 1 M~~f~~~~---~~~~~~~~~~~~~~~~~~~-----~-~~--------~~~----------~a~~~~~v~~~i~~ia~~ia 53 (406) |.-.+.+- ..-.+.=..+.....|... . ++ .++ .|.-.+.+...++.++..+- T Consensus 32 m~dV~~~hp~y~a~~~~W~~ird~~~G~~~~r~~g~~YLP~~~~~~~~~E~~~~Y~~rl~rA~~~n~~~~tl~~l~G~vf 111 (535) T protein:vir:80 32 LPNVGYQRVEFGEMLPKWRKIMDCLSGQEAIKAKREEYLPMPSVDSRDEEQRRRYETYLQRAIFYNVTARTLDGMMGQVF 111 (535) T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHhcChHHHHhcccccCCCCCcccCCcCCHHHHHHHHhhccCCChhHHHHHHHhchhh Confidence 77432111 0001111112222222210 0 10 000 01122233344444444444 Q ss_pred cceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc------------eeEEEee Q lcl|Aclame:pro 54 RFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN------------QALQFQF 121 (406) Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g------------~~~~l~~ 121 (406) +-|..+ ..+..+..++..-=-...+-.+|.+.++...+.+|-+++++.....++ +|... . T Consensus 112 rk~p~~-------~~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~iLVD~P~~~~~~t~ade~~~~~rPy~~-~ 183 (535) T protein:vir:80 112 SRDPIR-------QLPPALEAIVEDIDGEGVSLDQQAKKALGYTMGFGRAAIFTDYPNVGRPVTVLEQKLGLYRPTIT-L 183 (535) T ss_pred cCCcce-------eccHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeecCCCCcccHHHHHhcCCCcEEE-E Confidence 333322 223445555432222455778999999999999999999887653322 12211 1 Q ss_pred cCCeeEE-----------------E----EEccCc---ce--EEEEEee-cCCeE------------------EEEcce- Q lcl|Aclame:pro 122 YRPSETT-----------------V----EETDNH---EI--VYTFTDM-LTAKQ------------------VKCFAH- 155 (406) Q Consensus 122 l~p~~~~-----------------~----~~~~~g---~~--~~~~~~~-~~g~~------------------~~~~~~- 155 (406) +.|..+- . ...+++ .. .|.+... .+|.. ..++.+ T Consensus 184 y~ae~IinW~~~~v~G~~~Lt~v~lrE~~~~~dd~f~~~~~~q~RvL~~~~~G~y~v~~~~~~~~~~~~~~~~~~~~~~~ 263 (535) T protein:vir:80 184 VHPTSIINWRTKLVGGKSVISLVVIQENVLAQDDGFETTYVQQWRVLQLNAEGNYQVERWRRETQEEMYYSYSKHVPTDG 263 (535) T ss_pred echhhccCccccccCCccceeEEEEEEEEEecCCCcccceeEEEEEEEecCCceEEEEEEEeecCCccccccceeecccC Confidence 1111110 0 001111 00 0111000 00100 000000 Q ss_pred --------eeEeeccCCCCCccccCHHHHHHHH-HHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHH Q lcl|Aclame:pro 156 --------DVIHWKFFSHDTILGRSPLLSLGDE-IDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKM 226 (406) Q Consensus 156 --------~vih~r~~~~~~~~G~s~~~~~~~~-i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 226 (406) .++++.....+...|.+|+..++.. +........+... +...+.|-.++.......+++. .+ -... T Consensus 264 g~~~l~~IPfv~~~~~~~~~~~~~pPLl~LA~lni~Hy~~ssd~~~i-l~~~~~P~l~i~G~~~~~~~~~---~~-~~~i 338 (535) T protein:vir:80 264 NGNPFKEIPFQFIGPLDNNADIDHPPLLDLCEVNIGHYRNSADYEEM-AFVAGQPTAFFTGLTKDWVEDV---FK-DFKV 338 (535) T ss_pred CCcccCeeEEEEeecCCCCCCCCccchHHHHHHHHHHhhchhHHHHH-HHHhcCceeeeecCchhhhhcC---CC-Ccce Confidence 1122211122234577777655544 4444444444333 4444556555543221111100 00 0012 Q ss_pred hcccccCceeeccCCc--eeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 227 REGSVGGSPLVFDSTM--EYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFYFD 304 (406) Q Consensus 227 ~~g~~~~~~~vl~~g~--~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~~~~i~P~~~ 304 (406) .-|.++ .+.++.+. +|..++.+.-..+.++.++.....+...+-+.. .-+.+.+.+. ....=-+..|.-++. T Consensus 339 ~iG~~~--~~~lP~~~~~~~~e~~~~~~a~~~l~~~e~qM~~lGa~ll~~~-~~~~Ta~~a~---~~~~~~~S~L~~~a~ 412 (535) T protein:vir:80 339 HLGSRA--IIPLPQGATAGILQITPNSVPFEAMTHKESQMIAMGANLLVKS-GGNRTFGEAQ---QEEASEQSILSACTK 412 (535) T ss_pred EecCcc--cccCCCCCCcceeeeccchhHHHHHHHHHHHHHHHHHHhhccC-cccccHHHHH---HHHHHHhHHHHHHHH Confidence 234332 45666554 445554433333333333333222222221211 0011111111 111222456777888 Q ss_pred HHHHHHHhhccCc--c-----chh----hhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC---CCCe Q lcl|Aclame:pro 305 AITSELGLKTLND--K-----DRR----LYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDP---NMDR 370 (406) Q Consensus 305 ~ie~~l~~~l~~~--~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~---~gd~ 370 (406) ++|+.+++.|-.. + +.. .+.-+|.........++++.++++.|.++....++.|..--+..+ +-++ T Consensus 413 ~le~al~~aL~~~A~w~G~~~~~~~~~i~~n~dF~~~~ld~~~~~all~~~~~G~Is~et~~~~L~r~gvl~~~~~~eee 492 (535) T protein:vir:80 413 NVSMAFRKALRWANQFQTGIVNDETVEYNLNTDFPAARLTPNERAELILEWQQGAITFKEMRAGLRRAGVASEDDAKAET 492 (535) T ss_pred HHHHHHHHHHHHHHHHcCCccCCCceEEEeccccccccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCCCCcccchHHH Confidence 8888888755211 1 111 123334334344456777888899999998888777633222111 1110 Q ss_pred e-eeccC--ccchhhcccccccc-CcccCCCccCCCCCCC Q lcl|Aclame:pro 371 Y-QSSLN--YVFLDKKEEYQDKV-GIKGKGGEVNAEEDKS 406 (406) Q Consensus 371 ~-~~~~n--~~~~~~~~~~~~~~-~~~~~gg~~~~~~~~~ 406 (406) . .+... -.+........... +++.+ +-+|++.+-| T Consensus 493 ~~ri~~E~~~~~~~~g~~~d~~~~g~~~~-~~~~~~~~~~ 531 (535) T protein:vir:80 493 EGKATVEFIAKTAAAGKVGDAASGGTNKA-KLNNGNGGGN 531 (535) T ss_pred HHHHHhhhhhccccCCCCCCCCCCCCCcC-cccCCccccc Confidence 0 00000 00000000000000 11111 1112222222 No 239 >protein:vir:94572 Length: 535 # NCBI annotation: Head-to-tail joining protein # Family: family:all:481 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919010;genbank:gi:119637774;genbank:GeneID:5179332 Probab=82.19 E-value=0.079 Score=26.63 Aligned_cols=385 Identities=10% Similarity=0.027 Sum_probs=145.4 Q ss_pred Ccc---------------cccccCCCCcchhhHHHhh---cCCc--ccccchhh---hhccHHHHHHHHHHHHhhcc-c- Q lcl|Aclame:pro 1 MSF---------------FQPLGTSKVSYDDYISSVL---AGDV--SQKYLGVS---ALKNSDILTATSIIAGDIAR-F- 55 (406) Q Consensus 1 M~~---------------f~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~---a~~~~~v~~~i~~ia~~ia~-~- 55 (406) |+- |+.+++.+.++...+.+.. -.+. .......+ -.-.++.-.|++.+|..+-+ + T Consensus 1 ~~~~~~~~~~~~~~~~~r~~~l~~~R~~~e~~w~e~~~y~lP~~~~~~~~~~~~~~~~~~dst~~~a~~~Laa~l~~~lt 80 (535) T protein:vir:94 1 MASSQKREGFAENGAKAVYDALKNDRNSYETRAENCAKYTIPSLFPKDSDNASTDYTTPWQAVGARGLNNLASKLMLALF 80 (535) T ss_pred CCchhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccCCCCCCccccccCCcccccHHHHHHHHHHHHHhhhc Confidence 542 2233333444443332221 1100 00000111 12234445566666655433 2 Q ss_pred ---eeEEEecCCc--------cc----ccchHHH---HhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeE Q lcl|Aclame:pro 56 ---PLVKKDVNGD--------II----HDEDINY---LLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQAL 117 (406) Q Consensus 56 ---~~~~~~~~~~--------~~----~~~~~~~---lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~ 117 (406) ||.-...... .. ....+.. .+. .-...-+.+.=+..++.++.++||+..|+..+...+.+. T Consensus 81 P~~~WF~l~~~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~-~~~~~snf~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~f 159 (535) T protein:vir:94 81 PMQTWMKLTISEFEAKQLVAQPAELAKVEEGLSMVERILM-NYIESNSYRVTLFETLKQLVVAGNALLYIPEPEGTYNPM 159 (535) T ss_pred CCCCccccccChhhhhccccchhHHHHHHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHHHHhhCcEeEeeccCcCcccce Confidence 4533222110 00 1111111 111 111234445566677888889999999987764333344 Q ss_pred EEeecCCeeEEEEEccCcceE-----------------------------------EE-EEee-----------cCCeEE Q lcl|Aclame:pro 118 QFQFYRPSETTVEETDNHEIV-----------------------------------YT-FTDM-----------LTAKQV 150 (406) Q Consensus 118 ~l~~l~p~~~~~~~~~~g~~~-----------------------------------~~-~~~~-----------~~g~~~ 150 (406) ..||+. .+.+..+..|++. |. +... ..|... T Consensus 160 ~~~pl~--~y~v~~d~~G~vd~i~r~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~e~~g~~~ 237 (535) T protein:vir:94 160 KLYRLS--SYVVQRDAFGTVLQIVTLDKTAYAALPEDVRNSMDSSQEHKGDEMIDVYTHIYLDEESGEYLKYEEIDGVEV 237 (535) T ss_pred EEEEcC--eEEEeeCCCCCeEEEEeeeeccHHHhhHHHHHHHHhccccCCCceeEEEEEEEeeCCCCcEEEEEEecCeee Confidence 445543 3333344444321 11 0011 111111 Q ss_pred -------EEcceeeEeeccCCC-CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHH Q lcl|Aclame:pro 151 -------KCFAHDVIHWKFFSH-DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQE 222 (406) Q Consensus 151 -------~~~~~~vih~r~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~ 222 (406) .|..-..+..|+... ...||.||.+-+...+...+.+.+.......-...|..++..++...+.. T Consensus 238 ~~~~~~~g~~~~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~------- 310 (535) T protein:vir:94 238 EGTDASYPVDACPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNPAGITQVRR------- 310 (535) T ss_pred ccccccCccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccccccchhh------- Confidence 001112233343322 34899999999999999999999888887666666666665444333221 Q ss_pred HHHHhcccccCceeeccCCceeeeccCChhHHHH-HHHHHHHHHHHHHHhcCCHHHhcccccchhHHH--HHH------- Q lcl|Aclame:pro 223 FEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQL-ITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQ--LME------- 292 (406) Q Consensus 223 ~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~-~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~--~~~------- 292 (406) ...+.+..-+.-..+++...++...+ +++. .+..+..+..|..+|-+.. +....+..-+.+| .+. T Consensus 311 ---~~~~~~g~~v~g~~~~v~~~~~~~~~-~~~~~~~~i~~~~~rI~~af~~~~-~~~~d~~rvTAtEV~~r~~E~~~~L 385 (535) T protein:vir:94 311 ---LTKAQTGDFVSGRPEDISFLQLEKAA-DFSVARAVSEQIEGRLSYAFMLNS-AVQRTGERVTAEEIRYVASELEDTL 385 (535) T ss_pred ---cccCCCceeecCCcccceeeeccccc-chhHHHHHHHHHHHHHHHHHhHhh-hccCCCCCccHHHHHHHHHHHHHHh Confidence 11111111011123444455555433 3333 3456667788888884332 1111111112222 111 Q ss_pred -----HHHHHHHHHHHHHHHHHHHh-hccCccchhhhhhhhcccchhHHHH---HH----HHHHHhCC------CcCHHH Q lcl|Aclame:pro 293 -----DYVTNDLPFYFDAITSELGL-KTLNDKDRRLYHIEFDTRSVTGRNV---DE----IVKLVNNQ------ILTPNQ 353 (406) Q Consensus 293 -----~~~~~~i~P~~~~ie~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~g------~~t~NE 353 (406) .+....+.|++...=..+.+ .++++.....+.+++-..-..-.+. +. +..+.+.+ .+..++ T Consensus 386 Gpv~~rl~~ElL~Pli~r~~~il~r~g~lP~~p~~~v~~~~vs~la~l~r~~~~~~l~~~~~~laq~~P~~ld~~id~d~ 465 (535) T protein:vir:94 386 GGVYSILSQELQLPMVRVLLKQLQATNQIPELPKEAVEPTISTGMEALGRGQDLDKLERCIAAWSALAPMQGDPDINIAT 465 (535) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCChhhccceEeehHHHHHHHHHHHHHHHHHHHHHhhChHHhhhcCCHHH Confidence 23344455555443333322 3444333333333332110000111 11 11111111 112222 Q ss_pred ----HHHHhCCCCCCCCCCCeeeeccCccchhhc-cc-ccc----ccCcccCCCccCCCCCCC Q lcl|Aclame:pro 354 ----GLVELGKQKSTDPNMDRYQSSLNYVFLDKK-EE-YQD----KVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 354 ----~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~-~~-~~~----~~~~~~~gg~~~~~~~~~ 406 (406) +-+.+|.|+. ..+..+.-..-+-.. .. .+. ...+..-++. -..+.++ T Consensus 466 ~~~~~a~~~Gvp~~-----~i~rs~eev~~~~~q~~~~~~~~~~~~~~g~~~~~~-~~~~~~~ 522 (535) T protein:vir:94 466 IKLRIANAIGIDTS-----GILKTPEEKQQEMAEAAQGTAMQNAAASAGAGAGTM-ATASPEN 522 (535) T ss_pred HHHHHHHHhCCChh-----hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cccChHH Confidence 2233344421 001100000000000 00 000 0000000100 0011111 No 240 >protein:vir:106282 Length: 521 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944108;genbank:gi:38640152;genbank:GeneID:2658030 Probab=73.59 E-value=0.17 Score=24.83 Aligned_cols=380 Identities=10% Similarity=0.030 Sum_probs=168.4 Q ss_pred Ccc--------cccc---------cCCCCcchhh----------------------HHHhhcCCcccccch-------hh Q lcl|Aclame:pro 1 MSF--------FQPL---------GTSKVSYDDY----------------------ISSVLAGDVSQKYLG-------VS 34 (406) Q Consensus 1 M~~--------f~~~---------~~~~~~~~~~----------------------~~~~~~~~~~~~~~~-------~~ 34 (406) |+| |.+. +.+..++..+ ...+++... ..-+. ++ T Consensus 1 m~~~~l~lf~f~~k~~e~~~~~~~~~~~~s~~~p~~~dGa~~I~~~~~~~~~~~~~~~~~~~~~~-~~~n~~eLI~~YR~ 79 (521) T protein:vir:10 1 MNPIFLKLLQPWMKDDEKRVQSDLSDRIDSFAVPDTADGAIEVDKQIDTTAPKTAIVQSVLGYAP-KIQNTKDLINQYRS 79 (521) T ss_pred CCcchhHHhhhhhhhhhhHHhhhhccCccccccccCCCCceeeccCCCccccccchhhhhhcccc-ccchHHHHHHHHHH Confidence 443 3221 1111111100 001111100 00000 12 Q ss_pred hhccHHHHHHHHHHHHhhccc-----eeEEE--ecCCccc----ccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCc Q lcl|Aclame:pro 35 ALKNSDILTATSIIAGDIARF-----PLVKK--DVNGDII----HDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNS 103 (406) Q Consensus 35 a~~~~~v~~~i~~ia~~ia~~-----~~~~~--~~~~~~~----~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~ 103 (406) .+.+|.|.+||+-|.+.+.-+ |+.+. ..+.... ......++|+. -+-...+ ..++..|.+.|.. T Consensus 80 ma~~pEvd~Av~eIvneaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi 154 (521) T protein:vir:10 80 LSKYHEVDNAIDEIINDAIVQEDNRDTVYLDLDKTDWNESVKEMVREEFRTILKL-LKFEREG----KRHFRRWYVDSRI 154 (521) T ss_pred HhhccchhhHHHhhhcceEEecCCCceEEEEecCcccchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhheeeeeE Confidence 467899999999999887654 23322 1111111 12233344431 2223333 4456677889999 Q ss_pred eEEEEecCCC--ceeEEEeecCCeeEEEEEcc----Ccc--------eEEEEE------e---ecCCeEEEEcceeeEee Q lcl|Aclame:pro 104 FSRILRDPKT--NQALQFQFYRPSETTVEETD----NHE--------IVYTFT------D---MLTAKQVKCFAHDVIHW 160 (406) Q Consensus 104 ~~~i~~~~~~--g~~~~l~~l~p~~~~~~~~~----~g~--------~~~~~~------~---~~~g~~~~~~~~~vih~ 160 (406) |..++.|... .-+.++..|+|..++..+.. .+. -+|.|. . ...+..++++.+.|.|. T Consensus 155 ~fHkiid~~~pk~GI~Elr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~~g~~~~~vkI~~daI~y~ 234 (521) T protein:vir:10 155 YFHKMIDPARPKDGIKELRLLDPRNVEYYRVNLKSNENGNDVYKGVKEFFTYGATEDNRYNISGNSNNLVQIPIDAIVYS 234 (521) T ss_pred EEEEEeeCCCccccceeeeeeCCcceeeeeeecCCCCCcchhhccceeeeeeccCCCceecCCCCCCcceeechhheeee Confidence 9887765332 35889999999998654321 111 111111 0 11123356777666555 Q ss_pred c--cCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHh---------c Q lcl|Aclame:pro 161 K--FFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMR---------E 228 (406) Q Consensus 161 r--~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~---------~ 228 (406) . ....++-+.+|-+..|...+....-+.....-+-=..++-.-++ .-.+.+-+...++....+-..+ + T Consensus 235 hSGL~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlpk~KAeqYl~~iM~k~kNklVYDa~T 314 (521) T protein:vir:10 235 HSGKVDIDGKTIVGYLHNVIKPANQLKMLEDAMVIYRITRAPERRVFYIDVGTMPNKKATQHLNNVMQGLKNRVVYDSST 314 (521) T ss_pred cccceeCCCCceeccchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccC Confidence 4 23455677888888888888877777766655433334333333 3334444333343333332222 2 Q ss_pred cc--c-cCceeec----------cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccc----hhHH-HH Q lcl|Aclame:pro 229 GS--V-GGSPLVF----------DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPN----QSVA-QL 290 (406) Q Consensus 229 g~--~-~~~~~vl----------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~----~n~~-~~ 290 (406) |. + ......+ ..|.+++.|.-. +-+.-++-.++..+.+.++++||.+-|+..+++ ...| .. T Consensus 315 Gev~ddrk~msMlEDyWLpRReGgrgTEI~TLpgg-qnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~f~~Gr~~EItR 393 (521) T protein:vir:10 315 GKVKNSSNNLAMTEDYWLMRRDGKATTEVSTLPGA-QSMGEMDDVRWFNRKLYESMKIPLSRLPQEGAGVTFGAGNDITR 393 (521) T ss_pred ceeccchhhhhhHhhhcccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCccccCCCCCceecccccchhH Confidence 21 1 1111122 246777776532 112233445567788999999999999754321 1111 11 Q ss_pred HHHHHHHHHHHHHHH----HHHHHHhhccC-----ccchh----hhhhhhccc---------chhHHHHHHHHHH----H Q lcl|Aclame:pro 291 MEDYVTNDLPFYFDA----ITSELGLKTLN-----DKDRR----LYHIEFDTR---------SVTGRNVDEIVKL----V 344 (406) Q Consensus 291 ~~~~~~~~i~P~~~~----ie~~l~~~l~~-----~~~~~----~~~~~~~~~---------~~~~~~~~~~~~~----~ 344 (406) .+.=++..|.-+-.. +.+.|...|+. ..++. .+.++|..+ ..+..|+..+..+ + T Consensus 394 DEikF~KFI~rLR~rFs~~f~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~eil~~R~~~l~~~dp~~y 473 (521) T protein:vir:10 394 DELQFTKYIRGLQQQFEPIFLNPLRTNLMLKGKMSVSEWEEQAENIKVVFSKDSYYEEIKDVEILERRVNLVQTLASAEV 473 (521) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHhhcCccc Confidence 112223334444444 44444444432 23332 222333222 1233455555443 2 Q ss_pred hCCCcCHHHHHHH-hCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCC----ccCCCCCC Q lcl|Aclame:pro 345 NNQILTPNQGLVE-LGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGG----EVNAEEDK 405 (406) Q Consensus 345 ~~g~~t~NE~R~~-~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg----~~~~~~~~ 405 (406) -+-+++.+=+|+. |.+.-.+- ...+ ..-....+.| .+++.+|= T Consensus 474 vGky~s~dyi~k~ILr~tDeei------------k~~~------k~I~~E~~~~~~~~p~~e~~df 521 (521) T protein:vir:10 474 TGKYLSHEYVMKNILRMSDEDI------------KTER------EKIDGELKDSVYKNPEDPMEEF 521 (521) T ss_pred cccccchHHHHHHHhcCCHhHH------------HHHH------HHHHHhhhCCCCCCCcchhhcC Confidence 2336677666654 34331100 0000 0000111111 11111111 No 241 >protein:vir:103765 Length: 549 # NCBI annotation: hypothetical protein # Family: family:all:481 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024925;genbank:gi:48697195;genbank:GeneID:2846089 Probab=69.37 E-value=0.22 Score=24.15 Aligned_cols=385 Identities=13% Similarity=0.024 Sum_probs=157.1 Q ss_pred Ccc------------cccccCCCCcchhhHHHh---hcCCcc--------cccch---hhhhccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MSF------------FQPLGTSKVSYDDYISSV---LAGDVS--------QKYLG---VSALKNSDILTATSIIAGDIAR 54 (406) Q Consensus 1 M~~------------f~~~~~~~~~~~~~~~~~---~~~~~~--------~~~~~---~~a~~~~~v~~~i~~ia~~ia~ 54 (406) |+= |..+++.+.++...+.+. .-...+ ..... ..-.-.++--.|++.+|..+-+ T Consensus 1 m~~d~~~~~~~l~~r~~~l~~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~~~~~~~~~~dstg~~a~~~LAs~l~~ 80 (549) T protein:vir:10 1 MTNDDAKILQALNADHGRMKEKRQSYEAVWNDVIDYLMPRLDKFGQLPRPDSEKGRERSQKMFDSTAPLALRNFVAAMDS 80 (549) T ss_pred CCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccccccccCCCCCCcccccccccccchHHHHHHHHHHHHHh Confidence 542 222333444544433222 111100 00000 0112233444556655555432 Q ss_pred -c-----eeEEEecCC-ccccc----chHHH---Hhhhhcc-ccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEE Q lcl|Aclame:pro 55 -F-----PLVKKDVNG-DIIHD----EDINY---LLNVKST-SNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQF 119 (406) Q Consensus 55 -~-----~~~~~~~~~-~~~~~----~~~~~---lL~~~Pn-~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l 119 (406) + ||.-...+. ..... .++.. .+...-+ ..-+.+.-+..+..++.++|++.+++..+... ...+ T Consensus 81 ~ltpp~~~wF~l~~~~~~~~e~~~v~~~l~~ve~~~~~~~~~~~snf~~~~~~~~~~L~~~Gta~l~~~~~~~~--~~~f 158 (549) T protein:vir:10 81 MITPATQLWHRLKTGNDALNEIASVKAYLQGVVRTLFAARYRWQGGFVTQMGATYQSIGLFGPGALMIEHDVGK--GIVY 158 (549) T ss_pred hccCCCCccccccCCccchhhhhHHHHHHHHHHHHHHHHHhhhhcChHHHHHHHHHHHHhhcceeeEEeecCCC--eeEE Confidence 2 554333221 11111 11111 1111112 12334555677788999999999998876443 3444 Q ss_pred eecCCeeEEEEEccCcceEEEEEee---------cCC-----------------eEEE---------------------- Q lcl|Aclame:pro 120 QFYRPSETTVEETDNHEIVYTFTDM---------LTA-----------------KQVK---------------------- 151 (406) Q Consensus 120 ~~l~p~~~~~~~~~~g~~~~~~~~~---------~~g-----------------~~~~---------------------- 151 (406) ..++...+.+..+..|++.-.+... .-| ..++ T Consensus 159 ~~~pl~~~~v~~d~~G~vd~i~r~~~~t~~ql~~~fg~~~l~~~v~~~~~~~~~~~~~v~~~V~pr~~~~~~~~~~~~~p 238 (549) T protein:vir:10 159 RNVPMQRLWFAENNSGLIDKTHVQWELTLRQAAQRFGRENLSPSMQSTLEKDPEKSAIFYHAVEPRADRDPRKLDGRNMQ 238 (549) T ss_pred EEEEcCeEEEeeCCCCCeEEEEEEeecCHHHHHHhcCcccCCHHHHHHhhcCCCceEEEEEEeecCCCCCccccccccCc Confidence 4444455666666666543222100 000 0000 Q ss_pred -------EcceeeE-----------eeccCCC-CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCC Q lcl|Aclame:pro 152 -------CFAHDVI-----------HWKFFSH-DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLS 212 (406) Q Consensus 152 -------~~~~~vi-----------h~r~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~ 212 (406) ...+.|+ -.|+... ...||.||.+-+...+...+.+.+...........|.+.+....... T Consensus 239 f~sv~~e~~~~~il~esg~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~~v~~~g~~~ 318 (549) T protein:vir:10 239 FASYWLDEGRDRIVQNSGFRTFPFAIGRFYVGTDDVYGGSPAYDAMPDVRMANDMAKTNIRGAQKLVDPPLLANEDGVLD 318 (549) T ss_pred eEEEEEEecCCEeeccCCcccCCcceeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccccc Confidence 0001111 1122212 24799999999999999999999999888888888887765444443 Q ss_pred HHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHH-HHHHHHHHHHHHHhcCCHHHhcccccchhHHH-- Q lcl|Aclame:pro 213 GDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLI-TSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQ-- 289 (406) Q Consensus 213 ~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~-e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~-- 289 (406) +.+. ..|........-.+...++|+... .+++.. +..+..+..|..+|-+.....-..+..-+.+| T Consensus 319 ~~~l----------~pgg~~~~~~~~~~~~~~~pl~~~-~~~~~~~~~i~~~~~rI~~af~~d~~~~~~~~~~~TAtEV~ 387 (549) T protein:vir:10 319 GFDL----------RSGALNWGGLNDKGEEMVKPLLTG-KQAQIGIEFAQDTRQTINQWFYVTLFQILVDSGDMTATEVL 387 (549) T ss_pred ccee----------ccCCccccccCCCCccceeeeccc-cchhHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCccHHHHH Confidence 3221 122221111111234567777654 344433 44677778899999877532211111112221 Q ss_pred HH------------HHHHHHHHHHHHHHHHHHHHh-hccCccchh------hhhhhhcccchhH----HHHHHHHHHH-- Q lcl|Aclame:pro 290 LM------------EDYVTNDLPFYFDAITSELGL-KTLNDKDRR------LYHIEFDTRSVTG----RNVDEIVKLV-- 344 (406) Q Consensus 290 ~~------------~~~~~~~i~P~~~~ie~~l~~-~l~~~~~~~------~~~~~~~~~~~~~----~~~~~~~~~~-- 344 (406) .+ ..+....+.|++...-..+.+ ..+++.... .+.+++ +..+-+ .....+...+ T Consensus 388 ~r~~E~~~~LGpv~~rl~~E~l~Pli~R~~~il~r~g~lP~~p~~l~~~~~~~~i~y-is~La~aq~~~~~~~i~~~~~~ 466 (549) T protein:vir:10 388 QRAQEKGVLLAPTLGRTQSELLGPMIAREVDILAEAGQLPDMPQELIDAGADVDVEY-DSPLNKAMRAGEGAAILQWLQQ 466 (549) T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhhcCCceeEEEe-ecHHHHHHHHHHHHHHHHHHHH Confidence 11 123334445554433333332 223322111 122222 111211 1111111111 Q ss_pred -----hCC-----CcCHHH----HHHHhCCCCCCCCCCCeeeeccCcc-chhhc--cccc---c-----ccCcccCCCcc Q lcl|Aclame:pro 345 -----NNQ-----ILTPNQ----GLVELGKQKSTDPNMDRYQSSLNYV-FLDKK--EEYQ---D-----KVGIKGKGGEV 399 (406) Q Consensus 345 -----~~g-----~~t~NE----~R~~~g~~p~~~~~gd~~~~~~n~~-~~~~~--~~~~---~-----~~~~~~~gg~~ 399 (406) +.+ .+..++ +.+.+|.|+- ++.+..-+ -+-.. ...+ . ...+..+..-+ T Consensus 467 ~~~laq~~Pe~ld~id~d~~~~~~a~~~Gvp~~-------~irs~eev~~~r~~~~~qqq~~~~~~~a~~a~~~a~~~~~ 539 (549) T protein:vir:10 467 LGIVSQFDPAAAKVPNGARIARLLADYGGVPVE-------AMSTDEELQAQQAAEAQAAQMQQMLAAAPVAAGAIKDLSD 539 (549) T ss_pred HHHHhccChhHHhcCCHHHHHHHHHHhcCCCcc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh Confidence 111 122222 2233455431 11111100 00000 0000 0 00011111222 Q ss_pred CCCCCCC Q lcl|Aclame:pro 400 NAEEDKS 406 (406) Q Consensus 400 ~~~~~~~ 406 (406) .....++ T Consensus 540 ~~ta~~~ 546 (549) T protein:vir:10 540 AQTAAQT 546 (549) T ss_pred hcCCCcc Confidence 3333444 No 242 >protein:vir:80165 Length: 651 # NCBI annotation: portal protein # Family: family:all:1548 # MgeID: mge:1878 # MgeName: Pf-WMP3 # Cross-refs: genbank:acc:YP_001285799;genbank:gi:148747833;genbank:GeneID:5220441 Probab=68.81 E-value=0.23 Score=24.06 Aligned_cols=386 Identities=10% Similarity=0.032 Sum_probs=152.3 Q ss_pred CcccccccCCCCcch-hh------------HHHhhcC----C-cccccchhhhhccHHHHHHHHHHHHhhccc-----ee Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYD-DY------------ISSVLAG----D-VSQKYLGVSALKNSDILTATSIIAGDIARF-----PL 57 (406) Q Consensus 1 M~~f~~~~~~~~~~~-~~------------~~~~~~~----~-~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~-----~~ 57 (406) =..|++....+.... .| ......+ . ........+..-.+.|+.+|+.+...+... +| T Consensus 26 ~~~~~~~~~~r~~~~~~w~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~rs~~~~~~v~~~ve~~~~~l~~~~~~~~~~ 105 (651) T protein:vir:80 26 KKEYKRFCDARQVCEETWLEAWGMYLSTPEAQDYLRDQVLRSVGDVNADWRHKITTGKAFEAIETIHAYLMSATFPNKNW 105 (651) T ss_pred HHHHHHHHHHhhhhhhhHHHHHHhhcccHHHHHhhccccccccCCCCCCCCccccChhHHHHHHHHHHHHHHhhcCCCce Confidence 111111111111110 00 0011100 0 011111233445677888887655555442 22 Q ss_pred EEEecCCccc----ccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC-------------------- Q lcl|Aclame:pro 58 VKKDVNGDII----HDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKT-------------------- 113 (406) Q Consensus 58 ~~~~~~~~~~----~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~-------------------- 113 (406) .-+.+-+... ....+.+++...- ...........++.+.++.|++++.+.++... T Consensus 106 ~~~~p~~~~d~a~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~d~l~~G~~i~kv~we~~~~~~~~~~~~~~~~~~~~~~~ 184 (651) T protein:vir:80 106 FDVVPAKPGQDNLLVSRLIKRYVQDKL-TEGKFRAAYANFLRQLLITGNSVLALPWRVETAEVKKKVQVRTPLFEDEPTF 184 (651) T ss_pred eEeccCCchhHHHHHHHHHHHHHHHHh-hccCcHHHHHHHHHhhcccCceEEEEeecceeeeeehheeccccccccccce Confidence 2112211111 1111233332211 12335567778889999999998866554210 Q ss_pred ----------ceeEEEeecCCeeEEEEEccC----c-------------------------------------------- Q lcl|Aclame:pro 114 ----------NQALQFQFYRPSETTVEETDN----H-------------------------------------------- 135 (406) Q Consensus 114 ----------g~~~~l~~l~p~~~~~~~~~~----g-------------------------------------------- 135 (406) |.| .+..++|..+.+...-. + T Consensus 185 ~v~~~~~~~~~~~-~i~~v~p~~~~~dp~a~~~~d~~~v~~~~~t~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 263 (651) T protein:vir:80 185 EVVSEEREVKSSP-DFEVLDMFDCFYDPNVTDPNRGAFIRKLTKTKADILNLLSEGYYYGVDPLDVVEHKCKDTSDTKQD 263 (651) T ss_pred eeeccceeeecee-EEEEecHHHeeecCCCcCccccceeeeeeeeHHHHHHHHhcccccchhhHHHHhhhccccccCCcc Confidence 111 11222221111100000 0 Q ss_pred -----------------c-eEEEEE--eecCC-eE----EEEcceee--------------EeeccCCCC-CccccCHHH Q lcl|Aclame:pro 136 -----------------E-IVYTFT--DMLTA-KQ----VKCFAHDV--------------IHWKFFSHD-TILGRSPLL 175 (406) Q Consensus 136 -----------------~-~~~~~~--~~~~g-~~----~~~~~~~v--------------ih~r~~~~~-~~~G~s~~~ 175 (406) . .+|.++ ....| .. ..+....| ++++..+.+ ..||.|+++ T Consensus 264 ~~~~~~~~d~~~~~~~~~v~v~E~~~~~d~e~~~~~~~~v~~~g~~il~~~~~~~~~~~Pf~~~~~~~~~~~~yG~g~~~ 343 (651) T protein:vir:80 264 MLSTFQGVTTSLWSPHQNVELLEYWGDIHLENKTYHDVVVTIMGNEVLRFEQNPYWCGRPFVIGTYIPTARQPYAMGALQ 343 (651) T ss_pred ccccccCCCccccccccceEEEEEEEEeeccCCceEEEEEEEcCcEEecccccCCCCCCCeeeecceecCccccCCChHH Confidence 0 011111 01111 00 01111223 333333323 479999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHH Q lcl|Aclame:pro 176 SLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQ 255 (406) Q Consensus 176 ~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~ 255 (406) .+.......+.+.+.........+.|.+++..++...++++. . .-|++++...+.++.++...+.+.+ T Consensus 344 ~~~~~q~~ln~l~~~~ld~~~~~~~~~~~v~~d~~~~~~~l~----------~--~pg~vi~~~~~~~~~~l~~~~~~~~ 411 (651) T protein:vir:80 344 PNLGMLHELNIITNQRLDNLELAIDQMYTLRSDGLLQPEDVY----------T--EPGKVFLVSDHGDLQPLANQSSNFS 411 (651) T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCccccHHHhh----------c--CCCceEEecCCCCceeeccCcccch Confidence 999999999999988888777777788777666655554421 1 1244666666666777654332322 Q ss_pred -HHHHHHHHHHHHHHHhcCCHHHhcccccc---hhHH--HHHHHHHHHHHHHHHHHHHHHHHhhccC-----------cc Q lcl|Aclame:pro 256 -LITSNNFSTAQIAKALRVPSYKLGVNSPN---QSVA--QLMEDYVTNDLPFYFDAITSELGLKTLN-----------DK 318 (406) Q Consensus 256 -~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~---~n~~--~~~~~~~~~~i~P~~~~ie~~l~~~l~~-----------~~ 318 (406) ...........+-.++||+...-|..... .+.. .+...-....+.++++.+.+++..-|+. .. T Consensus 412 ~~~~~l~~l~~~~~~~~gv~~~~~g~~~~~~~~~TAteI~~~~~~~~~~l~~v~~~l~~e~l~pl~~r~l~l~~~~~~~~ 491 (651) T protein:vir:80 412 ITYQESSFLESTIDKNFGTGNYVGANAARSGERVTAAEVAAVREAGGNRLSGIHKHIEETSLLVLLEKVMHLVQQFTDQP 491 (651) T ss_pred hHHHHHHHHHHHHHHHhcCChHHhCCCccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc Confidence 23445666677889999998887753321 1111 1222333455555555555543222210 00 Q ss_pred ------c------------hhhhhhhhcccch----hHH---HHHHHHHHHhCCCcC------------HHHHHHHhCCC Q lcl|Aclame:pro 319 ------D------------RRLYHIEFDTRSV----TGR---NVDEIVKLVNNQILT------------PNQGLVELGKQ 361 (406) Q Consensus 319 ------~------------~~~~~~~~~~~~~----~~~---~~~~~~~~~~~g~~t------------~NE~R~~~g~~ 361 (406) . +..+...+++... ... ....+..+.+.+.-. .-++.+..|++ T Consensus 492 ~~~ri~~~~~~~~~~~~i~~~dl~~~~~iv~~g~~~~~~r~~~~~~l~~~~q~~~~~p~~~~~~~~~~~~~~l~~~~g~~ 571 (651) T protein:vir:80 492 GMVRVAGDEAGAYEYYELDVEDLQKEVRLVPIGSDHVIERKQYIEDRLTFIQAVAQVPEMGQLVDYKRILVDLLQHWGFE 571 (651) T ss_pred cceeecccccccccccccCccceeeeeeeeeccHHHHHHHHHHHHHHHHHHHhhccCCccchhhhHHHHHHHHHHHcCCC Confidence 0 0011122222110 011 122222223221111 11223334543 Q ss_pred CCCCCCCCeeeeccCccchhhccccccccCcccCCCccCC--CCCCC Q lcl|Aclame:pro 362 KSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNA--EEDKS 406 (406) Q Consensus 362 p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~--~~~~~ 406 (406) - -+.++.+....+.....+......+ ..+++-.. -..+. T Consensus 572 ~-----~~~~l~~~~q~~~~~~~~~~~~q~~-~~~~~a~~~~~~~~~ 612 (651) T protein:vir:80 572 E-----PEAYLKQQDQQAPANPQEALLSQAK-DVGGQAMSNMLQNQL 612 (651) T ss_pred C-----cHHhcCCCccchhhhhhHHHHhhHH-HHHHHHHHHHHHHHH Confidence 2 1233322221111000000000000 00000000 00000 No 243 >protein:vir:95014 Length: 491 # NCBI annotation: structural protein # Family: family:all:584 # MgeID: mge:1547 # MgeName: KS7 # Cross-refs: genbank:acc:YP_224035;genbank:gi:62327322;genbank:GeneID:5176842 Probab=65.85 E-value=0.28 Score=23.64 Aligned_cols=380 Identities=12% Similarity=0.055 Sum_probs=156.1 Q ss_pred CcccccccCCCCcch----------hhHHHhhcCCcc-----cc------------cch--hhhhccHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYD----------DYISSVLAGDVS-----QK------------YLG--VSALKNSDILTATSIIAGD 51 (406) Q Consensus 1 M~~f~~~~~~~~~~~----------~~~~~~~~~~~~-----~~------------~~~--~~a~~~~~v~~~i~~ia~~ 51 (406) |=--+-+.+..+..- ..+.....|... .+ +.. ..|.-.+.+...++.++.. T Consensus 1 ~~~~~~~~~~V~~~hp~y~a~~~~W~~ird~~~G~~~~~~r~~yl~~~~~~~~e~~Y~~rl~rA~~~n~~~~tl~~l~G~ 80 (491) T protein:vir:95 1 MLTANGQGSGVKTKHREWLHYAPKWQKVRHALAGDLVGYLRNVGLNEPDKAYGEARQAEYEAGGIVYNFTRRTLSGMVGS 80 (491) T ss_pred CcccCCccCCCCccCHHHHHHHHHHHHHHHHhcCcchhhcccCCCcCCCCCCCHHHHHHHHhcccCCChHHHHHHHHhch Confidence 222111111110000 001111111100 00 000 0012233445566666666 Q ss_pred hccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc-----------eeEEEe Q lcl|Aclame:pro 52 IARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN-----------QALQFQ 120 (406) Q Consensus 52 ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g-----------~~~~l~ 120 (406) +-+-|..+ ..+..+..++..-=-...+-.+|.+.++...+.+|-+++++..+..++ +|. +. T Consensus 81 vfrk~p~~-------~~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~T~Ade~~~~~rPy-~~ 152 (491) T protein:vir:95 81 VMRKEPEI-------NIPKELEYLLKNADGSGVGLIQHAQDTLMEIDSVGRGGLLVDAPETAAATAAEQNAGLLNPT-IA 152 (491) T ss_pred hhcCCcee-------eccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCeEEEEEecCCCcccCHHHHHHhcCCcE-EE Confidence 66555544 123445555532223556678999999999999999999988765433 232 22 Q ss_pred ecCCeeEEEE----------------------EccCc------ceEEEEEee-cCCeE--EEE----------cceeeEe Q lcl|Aclame:pro 121 FYRPSETTVE----------------------ETDNH------EIVYTFTDM-LTAKQ--VKC----------FAHDVIH 159 (406) Q Consensus 121 ~l~p~~~~~~----------------------~~~~g------~~~~~~~~~-~~g~~--~~~----------~~~~vih 159 (406) .+.|..+.-+ .+..+ ...|.+... .+|.. +.+ ....++| T Consensus 153 ~~~~~~IinW~~~~v~g~~~L~~v~l~E~~~~~d~~~~f~~~~~~qyRvL~l~~~g~~~~~v~r~~~~g~~~~~~~~~~~ 232 (491) T protein:vir:95 153 FYTTENIVNWRLTRVGSVNRVTMVVLRETWEYHEPGNEFETKYGEQYRVLDIDTDGNYRQRLFRFDAEGGAQEEVVEIYP 232 (491) T ss_pred EechhhhcCceeeeeCCceeeeEEEEEEeEEeecCCCCcccceEEEEEEEeecCCCceEEEEEEEcCCCcceeeeeeeee Confidence 2222222100 00000 001111100 11110 000 0011111 Q ss_pred --------------eccCCCCCccccCHHHHHHHH-HHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHH Q lcl|Aclame:pro 160 --------------WKFFSHDTILGRSPLLSLGDE-IDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFE 224 (406) Q Consensus 160 --------------~r~~~~~~~~G~s~~~~~~~~-i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~ 224 (406) +-....+...|.+|+..++.. +........+. ..+...+.|-.++......+++..+.... . T Consensus 233 ~~g~~~l~~IPfv~~~~~~~~~~~~~pPLl~LA~lni~Hy~~ssd~~-~~l~~~~~P~l~~~G~d~~~~~~~~~~~~--~ 309 (491) T protein:vir:95 233 DLGESLRGVIPFTFIGATNNDATIDDAPLLPLAELNIGHYRNSADNE-ESSFVVGQPTLFIYPGDNLTPQSFKEANP--N 309 (491) T ss_pred cCCCcccCeeEEEEEecCCCCCCCCcCchHHHHHHHHHHhhhhhHHH-HHHHHcccceeeeecCcccCcchhhccCc--c Confidence 111112224577787665544 44444444433 34555566766666555455444333221 1 Q ss_pred HHhcccccCceeeccCCceeeeccCChhHHH--HHHHHHHHHHHHHHHhcCCHHHhcccccc-hhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 225 KMREGSVGGSPLVFDSTMEYTPLEIDTNVLQ--LITSNNFSTAQIAKALRVPSYKLGVNSPN-QSVAQLMEDYVTNDLPF 301 (406) Q Consensus 225 ~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~--~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~-~n~~~~~~~~~~~~i~P 301 (406) ...-|.++ .+.++.+.++.-+...+..+. .++-++....++.+ .++-.+... .........--+..|.- T Consensus 310 ~i~~g~~~--~~~lP~~~~~~~ie~~~~~~~~~~l~~~e~qm~~~Ga------~l~~~~~~~Ta~~~~~~~~~~~S~L~~ 381 (491) T protein:vir:95 310 GIKFGSRC--GHNLGYGGSAQLIQAGENNLARQNMLDKEQQAIQIGA------QLITPSQQITAESARIQRGADTSVMAT 381 (491) T ss_pred eeEecCcC--CcCCCCCCccceeecCcchHHHHHHHHHHHHHHHHHH------HhccCCcchhHHHHHHHHHHhhHHHHH Confidence 12234333 455666555444443322221 12222222223322 122111111 11222333444778888 Q ss_pred HHHHHHHHHHhhcc------Ccc-chh---hhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCee Q lcl|Aclame:pro 302 YFDAITSELGLKTL------NDK-DRR---LYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRY 371 (406) Q Consensus 302 ~~~~ie~~l~~~l~------~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~~~gd~~ 371 (406) ++.++|+.+++.|- ... +.. .+..+|.........++++.++++.|.++....++.|-.--+.+..-+.. T Consensus 382 ~a~~~e~al~~~l~~~a~w~G~~~~~~v~i~~n~dF~~~~~~~~~~~all~~~~~G~is~~t~~~~L~~~~vl~~~~e~~ 461 (491) T protein:vir:95 382 IARNVSQAYTDALRWVAMMLGKPEDSEVEFQLNMDFFLQPMTAQDRAAWMADINAGLLPATAYYAALRKAGVTDWTDEDI 461 (491) T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCceEEEeecccccccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCCCCccHHHH Confidence 99999999987651 111 111 23455555555556788888999999999888887763222221111100 Q ss_pred e--eccCccchhhccccccccCcccCCCccCCCCCC Q lcl|Aclame:pro 372 Q--SSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 372 ~--~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~ 405 (406) . +.....++. .......+.++.-....+ T Consensus 462 ~~~ie~~~~~~~------~~~~~~~~~~~~~~~~~~ 491 (491) T protein:vir:95 462 LNAIEDAPLPSG------AVTQVAGEIPQAAQQQQE 491 (491) T ss_pred HHHHHhcCCCCC------ccccccccchhhhhhccC Confidence 0 000000111 011111111111111111 No 244 >protein:vir:104500 Length: 537 # NCBI annotation: gp20 # Family: family:all:1036 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214665;genbank:gi:61806306;genbank:GeneID:3294555 Probab=59.95 E-value=0.38 Score=22.87 Aligned_cols=391 Identities=13% Similarity=0.089 Sum_probs=165.6 Q ss_pred Cc-----c--cc-cccCCCCcc---h--hhHHHhhcC-Ccccccc--------h------hhhhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MS-----F--FQ-PLGTSKVSY---D--DYISSVLAG-DVSQKYL--------G------VSALKNSDILTATSIIAGDI 52 (406) Q Consensus 1 M~-----~--f~-~~~~~~~~~---~--~~~~~~~~~-~~~~~~~--------~------~~a~~~~~v~~~i~~ia~~i 52 (406) |. | .+ ++..+..++ . +......++ ..+.++. . ++.+.+|.|.+||+-|.+.+ T Consensus 1 ~~~~lfg~~i~~~~~~~~~~s~~~~~~~dg~~~~~~~~~~g~~~~~e~~~~~~~eLI~~YR~ma~~pEvd~Av~eIVnea 80 (537) T protein:vir:10 1 MAQQLFGFSLQRAKKVPKGPSFVQKDSLDGSQPIVGGGYFGYSVDFDGTIRNDHELITRYREMVLNPECDSAVDDVVNET 80 (537) T ss_pred CccccccceeecccccccCCcccCCCcccccceeecccccccccccccccchHHHHHHHHHHHhhccchhhHHHHhhcce Confidence 33 2 22 111111111 0 111111111 1111110 0 22467899999999999887 Q ss_pred ccc-----eeEEEecC--Ccc----cccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC--CceeEEE Q lcl|Aclame:pro 53 ARF-----PLVKKDVN--GDI----IHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK--TNQALQF 119 (406) Q Consensus 53 a~~-----~~~~~~~~--~~~----~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~--~g~~~~l 119 (406) .-+ |+.+.=.+ ... .......++|+. -+-...+ ..++..|.+.|..|..++.|.+ ..-+.++ T Consensus 81 iv~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~l-l~F~~~~----~e~fR~WYVDgRi~fhKiid~k~pk~GI~EL 155 (537) T protein:vir:10 81 ICGNFDDVPISIDLHNLKQSEKIKKLIRSEFDEILRL-LDFDNRA----YEIFRRWYVDGRLFFHKVIDPKKPRQGLVEL 155 (537) T ss_pred eEecCCCceEEEEecccccchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhheeeeEEEEEEEEeCCCccccceee Confidence 654 33332111 111 112233444431 2223333 4456677889999988877644 2358899 Q ss_pred eecCCeeEEEEEcc-----Ccc--------eEE----EEEeec------CCeEEEEcceeeEeec--cCCCCCccccCHH Q lcl|Aclame:pro 120 QFYRPSETTVEETD-----NHE--------IVY----TFTDML------TAKQVKCFAHDVIHWK--FFSHDTILGRSPL 174 (406) Q Consensus 120 ~~l~p~~~~~~~~~-----~g~--------~~~----~~~~~~------~g~~~~~~~~~vih~r--~~~~~~~~G~s~~ 174 (406) ..|+|..++.++.. .+. ++. ++.+.. .+..++++.+-|.+.. ....++-+.+|-+ T Consensus 156 r~lDPr~i~~vR~i~~~~~~~~~~~~~~~~v~~~~~eyf~ynp~g~~~~~~~~vkI~~dAI~y~hSGl~d~n~~~i~syL 235 (537) T protein:vir:10 156 RYVDPRKIRKVTEYEAKRPEALRTQDLNQQLTQQSASYFLYNPKGLKNSTNQGMKIAPDSIAYCHSGIQDLNKNMVLSHL 235 (537) T ss_pred eeeCCccceeeEeecccCCccceEEecceeeeecccceeeeccccccccCCCceeccHhheeeecccceeCCCCeeeeee Confidence 99999998654431 111 100 111111 2334556664443332 1234455678888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHh---------ccc---ccCceeec--- Q lcl|Aclame:pro 175 LSLGDEIDLQTGGINTLIKFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMR---------EGS---VGGSPLVF--- 238 (406) Q Consensus 175 ~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~---------~g~---~~~~~~vl--- 238 (406) ..|...+....-+.....-+-=..++-+-++ .-.+.+-+...++....+-..+ +|. +......| T Consensus 236 hkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddrk~msMlEDy 315 (537) T protein:vir:10 236 HKAIKAVNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKNKAEQYLREVMGRYRNKLVYDANTGEIKDDKKFMSMLEDF 315 (537) T ss_pred hhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccchhhhhhhhh Confidence 8888888777776666555433333333333 3334444434444333333322 221 11112222 Q ss_pred -------cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccc---hhHHH-HHHHHHHHHHHHHHHHH- Q lcl|Aclame:pro 239 -------DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPN---QSVAQ-LMEDYVTNDLPFYFDAI- 306 (406) Q Consensus 239 -------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~---~n~~~-~~~~~~~~~i~P~~~~i- 306 (406) ..|.+++.|.-. +-+.-++-.++..+.+.++++||.+-|+..+.. ...|= ..+.=++..|.-+-..+ T Consensus 316 WLPRReGgrgTEItTLpGg-qnlgem~DV~YF~kKLy~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~KFI~RLR~rFs 394 (537) T protein:vir:10 316 WLPRREGGRGTEISTLPGG-QNLGELEDVKYFQKKLYKALNVPSSRLETETTFNIGRAAEITRDEVKFQKFIARLRKRFS 394 (537) T ss_pred cccccCCCcccceeecccc-CCcChHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHHHHHHHHHHHHH Confidence 246777776532 112233445567788999999999999754322 11111 11122233344444444 Q ss_pred ---HHHHHhhccC-----ccchh----hhhhhhcccc---------hhHHHHHHHHHHH--hCCCcCHHHHHH------- Q lcl|Aclame:pro 307 ---TSELGLKTLN-----DKDRR----LYHIEFDTRS---------VTGRNVDEIVKLV--NNQILTPNQGLV------- 356 (406) Q Consensus 307 ---e~~l~~~l~~-----~~~~~----~~~~~~~~~~---------~~~~~~~~~~~~~--~~g~~t~NE~R~------- 356 (406) .+-|...|+. ..++. .+.++|..+. .+..|+..+..+- -+-.++.+=+|+ T Consensus 395 ~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~s~dyi~k~ILr~tD 474 (537) T protein:vir:10 395 ELFVDLLKTQLILKGICSIEEWEEMKEHIQFDFIADNYFTELKEIEIRNERMNEVAQMDPYVGKYFSANYIRTKVLKQTE 474 (537) T ss_pred HHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHHhccCH Confidence 4444444332 23332 2233332211 2233444433221 011223322221 Q ss_pred ------------HhCCCCCCCCC----CC------eeeeccCccchhhccccccccCcccCCCcc Q lcl|Aclame:pro 357 ------------ELGKQKSTDPN----MD------RYQSSLNYVFLDKKEEYQDKVGIKGKGGEV 399 (406) Q Consensus 357 ------------~~g~~p~~~~~----gd------~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~ 399 (406) +..-+.+.+|. |+ ..+.|.+..|-...+ ........+||+- T Consensus 475 eeI~~~~k~I~~E~k~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 537 (537) T protein:vir:10 475 SEIKEIDKEIKQEIADGVIMDPQAMQAMEMGIGDEEPVPEGGEEPQTDPN--SAVSPADQKRGEL 537 (537) T ss_pred HHHHHHHHHHHHHhhCCCCCCcccccccccCCCCcccCCCCCCCcccCCc--cCCCCCCccCCCC Confidence 11111121121 11 112222222211100 0011112233443 No 245 >protein:vir:98265 Length: 524 # NCBI annotation: gp20 portal vertex of the head # Family: family:all:1036 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239198;genbank:gi:66391673;genbank:GeneID:3416367 Probab=57.47 E-value=0.43 Score=22.57 Aligned_cols=381 Identities=9% Similarity=0.035 Sum_probs=159.7 Q ss_pred Ccc--------cccccCCCCcchh--hH--------HHhhcCCccc-ccc-------h-------hhhhccHHHHHHHHH Q lcl|Aclame:pro 1 MSF--------FQPLGTSKVSYDD--YI--------SSVLAGDVSQ-KYL-------G-------VSALKNSDILTATSI 47 (406) Q Consensus 1 M~~--------f~~~~~~~~~~~~--~~--------~~~~~~~~~~-~~~-------~-------~~a~~~~~v~~~i~~ 47 (406) +.. .+.+..+..++.. .. ....+|...+ ++. . ++.+.+|.|.+||+- T Consensus 17 ~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~y~~~e~~~~~~~eLI~~YR~ma~~pEvd~Av~e 96 (524) T protein:vir:98 17 AREDEIELEQQLKNDTGSVAPPKNNDGAYEIETDLNNQKYAGVFQQFYSGQDPAIQNKEQLINTYRGIMSYPEVENAVSE 96 (524) T ss_pred hhhhhhhHhhhhcCCcccccCCCCCCCceeecCCCCcceecceeeeeccccccccchHHHHHHHHHHHhhccchhhHHHh Confidence 221 1111111111000 00 0001111111 110 0 124678999999999 Q ss_pred HHHhhccc-----eeEEEecCCc------ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecC--CCc Q lcl|Aclame:pro 48 IAGDIARF-----PLVKKDVNGD------IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDP--KTN 114 (406) Q Consensus 48 ia~~ia~~-----~~~~~~~~~~------~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~--~~g 114 (406) |.+.+.-+ |+.+.=.+.+ ........++|+. -+-...+ ..++..|.+.|..|..++.+. ..| T Consensus 97 IVneaIv~~~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~fhkiid~~~~kG 171 (524) T protein:vir:98 97 IIDDAIVNEQGKDIITMDLAKTNFSKAIQDKIVEEFDNVLNI-YDFDNMG----ARLFRDWYVDSRIYFHKIMHKDESKG 171 (524) T ss_pred hhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceeEEEEEEcCCCCcc Confidence 99887543 3333211111 0112233344431 2223333 445667788999999888542 223 Q ss_pred eeEEEeecCCeeEEEEEc------cCcc-e-----EEEEEe------e------cCCeEEEEcceeeEeecc--CCCCCc Q lcl|Aclame:pro 115 QALQFQFYRPSETTVEET------DNHE-I-----VYTFTD------M------LTAKQVKCFAHDVIHWKF--FSHDTI 168 (406) Q Consensus 115 ~~~~l~~l~p~~~~~~~~------~~g~-~-----~~~~~~------~------~~g~~~~~~~~~vih~r~--~~~~~~ 168 (406) +.++..|+|..++.++. +.|. + -|+++. . ..+..++++.+.|+|... .+.++- T Consensus 172 -I~ELr~lDPr~i~~vr~~~~~~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~ikI~~dAIvy~hSGL~d~~~~ 250 (524) T protein:vir:98 172 -IRELRQLDPRCMELIRESITETLDGGVKVFRGYREFFVYSAPKAGYTYNGQIYQANQKIKIPRSAIVYAHSGLEDCSNN 250 (524) T ss_pred -eeeeeeeCCccceeeeeccccccccchhhccceeeeeeeccCCCccccccceecCCCceeechhheeeeccCcccCCCC Confidence 89999999999876531 1121 1 111111 1 123356788888888652 222211 Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHh---------ccc---ccCce Q lcl|Aclame:pro 169 LGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMR---------EGS---VGGSP 235 (406) Q Consensus 169 ~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~---------~g~---~~~~~ 235 (406) -+|-+..|...+....-+.....-+-=..++-.-++ .-.+.+-+...++....+-..+ +|. +.... T Consensus 251 -iisyLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGevrddrk~m 329 (524) T protein:vir:98 251 -IIGYLHRAVKPANQLRLLEDAMVIYRITRAPERRVFYIDVGQMGGNKATQYVNNIAQGLKNRVVYDARTGTVKNQQNNL 329 (524) T ss_pred -eeeehhHhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeeccCceeecccccc Confidence 146666666666665555555444422233333333 3334444444444333333333 231 11112 Q ss_pred eec----------cCCceeeeccC--ChhHHHHHHHHHHHHHHHHHHhcCCHHHhccccc----chhHH-----HHHHHH Q lcl|Aclame:pro 236 LVF----------DSTMEYTPLEI--DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSP----NQSVA-----QLMEDY 294 (406) Q Consensus 236 ~vl----------~~g~~~~~l~~--~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~----~~n~~-----~~~~~~ 294 (406) ..+ ..|.+++.|.- +.-+| +-.++..+.+.++++||.+-|+.... +...| =....| T Consensus 330 sMlEDyWLpRReGgrgTEItTLpggqnlgem---~DV~YF~kkLy~aLnVP~sRl~~~~~~f~~Gr~~EItRDEiKF~KF 406 (524) T protein:vir:98 330 SMTEDYWLMRRDGKAITEVSTLPGGQNFSDM---DDIKWFNRKLYEALRVPLSRMPRDDGGMQIGGGGEITRDELKFSKF 406 (524) T ss_pred chhhhhcccccCCCCccceeeccccCCcChH---HHHHHHHHHHHHHhCCCceeccCCCCccccccccchhHHHHHHHHH Confidence 222 24677777753 33344 44456778899999999999964321 11111 112233 Q ss_pred HHHHHHHHHHHHHHHHHhhccC-----ccchh----hhhhhhcccc---------hhHHHHHHHHHHHh--CCCcCHHHH Q lcl|Aclame:pro 295 VTNDLPFYFDAITSELGLKTLN-----DKDRR----LYHIEFDTRS---------VTGRNVDEIVKLVN--NQILTPNQG 354 (406) Q Consensus 295 ~~~~i~P~~~~ie~~l~~~l~~-----~~~~~----~~~~~~~~~~---------~~~~~~~~~~~~~~--~g~~t~NE~ 354 (406) +..-=.-+...+.+.|...|+. ..++. .+.++|..+. .+..|+..+..+-. +-+++.+=+ T Consensus 407 I~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~s~dyi 486 (524) T protein:vir:98 407 IRTLQIQFSPVLSDPLKTNLIAKKIITEDEWEENVSKISFVFQQDSYYAEVKDIEILERRLNLMSQVEGVVGKYVSHKYI 486 (524) T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEEeecchHHHHHHHHHHHHHHHHHHHhccccccccchHHH Confidence 3332233333444444444432 22322 2233332221 12334444433221 225566655 Q ss_pred HHH-hCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCC Q lcl|Aclame:pro 355 LVE-LGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 355 R~~-~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~ 405 (406) |+. |.+.-.+-..-++.. + ......--+ ..+.+.+|= T Consensus 487 ~k~ILr~tDeei~~~~k~I--------~-----~E~k~~~~~-~p~~e~~~f 524 (524) T protein:vir:98 487 MKEILRMSDEDIDEQAKLI--------E-----EESKEERFK-NPEAEEENF 524 (524) T ss_pred HHHHhccCHHHHHHHHHHH--------H-----HHHhCCCCc-CCccccccC Confidence 543 333211000000000 0 000000000 000111111 No 246 >protein:vir:7017 Length: 515 # NCBI annotation: head portal protein # Family: family:all:481 # MgeID: mge:141 # MgeName: SP6 # Cross-refs: genbank:acc:NP_853590;genbank:gi:31711672;genbank:GeneID:1481798 Probab=55.74 E-value=0.47 Score=22.37 Aligned_cols=385 Identities=10% Similarity=0.034 Sum_probs=148.1 Q ss_pred Cc----------ccccccCCCCcchhhHHHhh---cCC----cccccchhhhhccHHHHHHHHHHHHhhcc------cee Q lcl|Aclame:pro 1 MS----------FFQPLGTSKVSYDDYISSVL---AGD----VSQKYLGVSALKNSDILTATSIIAGDIAR------FPL 57 (406) Q Consensus 1 M~----------~f~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~a~~~~~v~~~i~~ia~~ia~------~~~ 57 (406) |= -|..+++.+.++...+.+.. -.+ .+..-.... .-.++.-.|++.+|..+.+ -|| T Consensus 6 ~~~~~~~~~l~~r~~~Lk~~R~~~e~~w~e~~~~tlP~~~~~~~~~~~~~~-~~dstg~~a~~~LAa~l~~~ltpp~~~W 84 (515) T protein:vir:70 6 LEYGGQRSKIPKLWEKFSKKRSPYLDRAKHFAKLTLPYLMNNKGDNETSQN-GWQGVGAQATNHLANKLAQVLFPAQRSF 84 (515) T ss_pred hhhcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcccccCCCCCcccccc-cccchHHHHHHHHHHHHHHhhcCCCCcc Confidence 21 13334445555444332221 110 000000111 1244455566666665533 255 Q ss_pred EEEecCC--------cccccchH-------HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeec Q lcl|Aclame:pro 58 VKKDVNG--------DIIHDEDI-------NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFY 122 (406) Q Consensus 58 ~~~~~~~--------~~~~~~~~-------~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l 122 (406) .-.+... .......+ .+.+.. --..-+.+.-+..+..++..+||+.+|+.. .++ ...||+ T Consensus 85 F~l~~~d~~~~~l~~~~~~~~~v~~~l~~ve~~~~~-~l~~snf~~~~~~~~~~L~~~G~a~l~~d~--~~~--~~~~pl 159 (515) T protein:vir:70 85 FRVDLTAKGEKVLDDRGLKKTQLATIFARVETTAMK-ALEQRQFRPAIVEVFKHLIVAGNCLLYKPS--KGA--MSAVPM 159 (515) T ss_pred cccccChhhhhccccchhHHHHHHHHHHHHHHHHHH-HHHhcCchHHHHHHHHHHHhHCeEEEEEeC--CCC--eEEEEc Confidence 4333211 00111111 112211 112235566667778888899999988743 322 445665 Q ss_pred CCeeEEEEEccCcceEEE-------------------------------------------------EEeecCCeEEE-- Q lcl|Aclame:pro 123 RPSETTVEETDNHEIVYT-------------------------------------------------FTDMLTAKQVK-- 151 (406) Q Consensus 123 ~p~~~~~~~~~~g~~~~~-------------------------------------------------~~~~~~g~~~~-- 151 (406) . .+.+..+..|++.-. +....++.... T Consensus 160 ~--~y~v~~d~~G~v~~i~rr~~~t~~~l~~~f~~~~~~~~~~~~~~~~~~v~i~~~v~~~~~~~~~~~~e~d~~~~~~e 237 (515) T protein:vir:70 160 H--HYVVNRDTNGDLMDVILLQEKALRTFDPATRMAIEVGMKGKKCKEDDNVKLYTHAQYAGEGFWKINQSADDIPVGKE 237 (515) T ss_pred C--eEEEeeCCCcCeeEEEeeeeccHHHHHHhhhhhhhhhhhhhhcCCCCceEEEEEEEecCCCceEEEEecCceeeccc Confidence 3 333344444433211 11111111000 Q ss_pred ----EcceeeEeeccCCC-CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHH Q lcl|Aclame:pro 152 ----CFAHDVIHWKFFSH-DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKM 226 (406) Q Consensus 152 ----~~~~~vih~r~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 226 (406) +..-..+-+|+... ...||.||.+-+...+...+.+.+.......-...|.+++..++...+.. . T Consensus 238 s~y~~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~p~~lv~~~g~~~~~~----------l 307 (515) T protein:vir:70 238 SRIKSEKLPFIPLTWKRSYGEDWGRPLAEDYSGDLFVIQFLSEAMARGAALMADIKYLIRPGSQTDVDH----------F 307 (515) T ss_pred cccccccCCceeeeeeecCCCCcccchHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeeeCcccccchhh----------c Confidence 00001122232222 34899999999999999999999999988888788877776554443221 1 Q ss_pred hcccccCceeeccCCceeeeccC-ChhHHHHH-HHHHHHHHHHHHHhcCCHHHhcccccchhHHH--HHHHHHHHHHHHH Q lcl|Aclame:pro 227 REGSVGGSPLVFDSTMEYTPLEI-DTNVLQLI-TSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQ--LMEDYVTNDLPFY 302 (406) Q Consensus 227 ~~g~~~~~~~vl~~g~~~~~l~~-~~~d~~~~-e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~--~~~~~~~~~i~P~ 302 (406) ..|.+ | .++-...-++.++.. +..+++.. +..+..+..|..+|-+......... .-++++ .+..-....|.|. T Consensus 308 ~~~~~-g-~iv~g~~~~v~~~~~~~~~d~~~~~~~i~~~~~rI~~af~~~~l~~rd~~-rvTAtEV~~r~~E~~~~LGpv 384 (515) T protein:vir:70 308 VNSGT-G-EVITGVAEDIHIVQLGKYADLTPISAVLEVYTRRIGVIFMMETMTRRDAE-RVTAVEIQRDALEIEQNMGGV 384 (515) T ss_pred cccCC-c-eeecCCcccceeeecCcccchhHHHHHHHHHHHHHHHHHhhhhhhccCCc-cccHHHHHHHHHHHHHHhhHH Confidence 12222 1 122222223333332 22344433 4566777889899977643332221 112222 1223333445555 Q ss_pred HHHHHHHHHhhc--------cCccchhhhhhhhcc--cchhH-HHHHHH---HHHHhCCCcCHHHHHHHhCCCCCCCCCC Q lcl|Aclame:pro 303 FDAITSELGLKT--------LNDKDRRLYHIEFDT--RSVTG-RNVDEI---VKLVNNQILTPNQGLVELGKQKSTDPNM 368 (406) Q Consensus 303 ~~~ie~~l~~~l--------~~~~~~~~~~~~~~~--~~~~~-~~~~~~---~~~~~~g~~t~NE~R~~~g~~p~~~~~g 368 (406) ...+.++|=.-| ++........+.+-. ..+.+ ..++.+ ...+..-..-+-++...++.+..-...+ T Consensus 385 ~srL~~Ell~Pli~r~~~~~~p~~P~~~v~~~~vs~l~~L~r~q~~~~i~~~~q~i~~~~~~~p~~~~~id~d~~~~~~a 464 (515) T protein:vir:70 385 YSLFAMTMQTPIAMWGLQEAGDSFTSELVDPVIVTGIEALGRMAELDKLANFAQYMSLPQTWPEPAQRAIRWGDYMDWVR 464 (515) T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCChhhcccceehhHHHHHHHHHHHHHHHHHHHHHHHhccChhHHhhCCHHHHHHHHH Confidence 555555553332 332222222222211 11111 111111 1111100000111222222211111111 Q ss_pred CeeeeccCccchhh-------c-ccc-c----cccCcccCCCccCCCCCCC Q lcl|Aclame:pro 369 DRYQSSLNYVFLDK-------K-EEY-Q----DKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 369 d~~~~~~n~~~~~~-------~-~~~-~----~~~~~~~~gg~~~~~~~~~ 406 (406) +..-+|.+++-.+. . .+. + ....++..++---+.--+. T Consensus 465 ~~~g~p~~~~rs~eev~~~r~q~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 515 (515) T protein:vir:70 465 GQISAELPFLKSEEEMQQEMAQQAQAQQEAMLNEGVAKAVPGVIQQEMKEG 515 (515) T ss_pred HHhCCCccccCCHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhccC Confidence 11112222211000 0 000 0 0001111111000000001 No 247 >protein:vir:96783 Length: 488 # NCBI annotation: putative structural protein # Family: family:all:584 # MgeID: mge:1629 # MgeName: phiHSIC # Cross-refs: genbank:acc:YP_224240;genbank:gi:62362375;genbank:GeneID:3345722 Probab=50.81 E-value=0.6 Score=21.80 Aligned_cols=364 Identities=8% Similarity=-0.063 Sum_probs=146.3 Q ss_pred CcccccccCC--------------CCcchhhHH----HhhcCCcc----c--------ccch----------hhhhccHH Q lcl|Aclame:pro 1 MSFFQPLGTS--------------KVSYDDYIS----SVLAGDVS----Q--------KYLG----------VSALKNSD 40 (406) Q Consensus 1 M~~f~~~~~~--------------~~~~~~~~~----~~~~~~~~----~--------~~~~----------~~a~~~~~ 40 (406) =|||=.-... .......+. .++...+. . +... ..|.-.+. T Consensus 10 ~~~~m~V~~~hp~y~a~~~~W~~~~d~g~~~~k~~g~~YLPk~~~~~~~~~~d~~y~~~~~~~~~~y~~~~~~rA~~~n~ 89 (488) T protein:vir:96 10 RGFFMLTPIYHPDYLVNAPQWLRNLDCVMDNIKRKKQTYLPNLGAIPPEAKTDPKVTALAAKIEKDWEDLTWRLANYVNI 89 (488) T ss_pred cceeecccccCHHHHHHhhhhhHhhhhhhHHHHHhhhhcCCCCCCccccccCcchhhhhhccchhhhHhhhhhccccCch Confidence 1111000000 000000000 00000000 0 0000 01222344 Q ss_pred HHHHHHHHHHhhccceeEEEecCCcccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCc------ Q lcl|Aclame:pro 41 ILTATSIIAGDIARFPLVKKDVNGDIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTN------ 114 (406) Q Consensus 41 v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g------ 114 (406) +..+++.++..+.+-|..+. ......+..++..-=-...+-.+|.+.++...+.+|-+++++......+ T Consensus 90 ~~~tl~~l~G~vfrk~p~~~-----~~~~~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~T~ade~ 164 (488) T protein:vir:96 90 VNPTMNAITGAVMRREPEFD-----TMDNPVLIGLRDNIDGKGNGIDQECKQALNALQWGSRCGWLVRSHPESATMADWN 164 (488) T ss_pred hHHHHHHhcchhhccCceec-----cCCcHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEecCCCcCCHHHHH Confidence 45556666666655555442 1111235555432223556678999999999999999999887763211 Q ss_pred ----eeEEEeecCCeeEE---------------E-----EEccCc-----ceEEEEEeecCCeEE--EE----------c Q lcl|Aclame:pro 115 ----QALQFQFYRPSETT---------------V-----EETDNH-----EIVYTFTDMLTAKQV--KC----------F 153 (406) Q Consensus 115 ----~~~~l~~l~p~~~~---------------~-----~~~~~g-----~~~~~~~~~~~g~~~--~~----------~ 153 (406) +|... .+.|..+- + ....+| ...+.+..-.+|... .+ + T Consensus 165 ~~~~rPy~~-~~~a~~IinW~~~~v~G~~~L~~v~lrE~~~~~D~~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~e~~~ 243 (488) T protein:vir:96 165 KGKKLPTAA-FYDALHIIDWEVEYIDGEEKLTYLSLLEDYQERDGGTYVSKQRLINHRLVDGLCEFQEVTDDEYSDEWTP 243 (488) T ss_pred HhcCCcEEE-EechhhhcCcceeccCCceeeEEEEEEEEEEeccCCCcccceEEEEEEEECcEEEEEEEecCCcccceEe Confidence 22211 11111110 0 001111 111111111122110 00 0 Q ss_pred c---------eeeEeeccCCCCCccccCHHHHHHH-HHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHH Q lcl|Aclame:pro 154 A---------HDVIHWKFFSHDTILGRSPLLSLGD-EIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEF 223 (406) Q Consensus 154 ~---------~~vih~r~~~~~~~~G~s~~~~~~~-~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~ 223 (406) . =.++++.....+...|.+|+..++. .+........+... +...+.|..+... ...+++..+.... T Consensus 244 ~~~g~~~l~~IP~v~~~~~~~~~~~~~pPLldLA~lnl~Hy~~ssd~~~i-l~~~~~p~lv~~~-~~~~~~~~~~~~~-- 319 (488) T protein:vir:96 244 VLINSKQSDTIPFFLASSQSNEWCIDSTPLTSLAEISLSIYVMNAYSNKA-MILANEAKWMVDM-GDMNKTMASEMNP-- 319 (488) T ss_pred ecCCCcccCeeEEEEEecCCCCCCCCCCchHHHHHHHHHHHhhhhHHHHH-HHhcCCceeeecc-CCCCccccccccc-- Confidence 0 0122222122223457777665544 46666666666444 4455556555432 2334333322211 Q ss_pred HHHhcccccCc--eeeccCC-ceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccc-hhHHHHHHHHHHHHH Q lcl|Aclame:pro 224 EKMREGSVGGS--PLVFDST-MEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPN-QSVAQLMEDYVTNDL 299 (406) Q Consensus 224 ~~~~~g~~~~~--~~vl~~g-~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~-~n~~~~~~~~~~~~i 299 (406) .|...+. +...+.| ++|.+.+...--.+-++.++....++.+ .++...... .........--+..| T Consensus 320 ----~g~~~~~~~~~~~~~g~~~~~e~~~~~l~~~~l~~l~~qm~~~Ga------~l~~~~~~~Ta~~~~~~~~~~~S~L 389 (488) T protein:vir:96 320 ----LGFTLAGRMPYYVKNGDVKVIQAQFSPETENKVEKLFEQAVKVGA------SLFTQQSNETATGAAIRSGSSTASM 389 (488) T ss_pred ----ceeeecccccccccCCceeecCCchhHHHHHHHHHHHHHHHHHhH------hhccCCCcchHHHHHHHHHHhhHHH Confidence 1222211 2233444 4555544332111222222222222322 222111111 112223334457788 Q ss_pred HHHHHHHHHHHHhhccCccc-------------h-hhhhhhhcccchhHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Q lcl|Aclame:pro 300 PFYFDAITSELGLKTLNDKD-------------R-RLYHIEFDTRSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTD 365 (406) Q Consensus 300 ~P~~~~ie~~l~~~l~~~~~-------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~NE~R~~~g~~p~~~ 365 (406) .-++.++|+.+++.|-.... . ..+.-+|.........++++.++++.|.++....++.+-.--+-. T Consensus 390 ~~~a~~le~al~~~l~~~A~w~g~~~~~~~~~~~~~~in~dF~~~~ld~~~~~al~~~~~~G~Is~~t~~~~L~~~gvl~ 469 (488) T protein:vir:96 390 ATLGNNVEDTVRNMLRFIMRYFEGTNLYVNPDELVFKLNRDYFDVEVNPQMLQVAYAAMMEGNLPQVSWFELLKRARVVR 469 (488) T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCcCccceEEEeccCCCCccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCcCC Confidence 88999999999876622110 0 112333334444566788888999999999888877763322211 Q ss_pred CCCCeeeeccCccchhhccccccccCccc Q lcl|Aclame:pro 366 PNMDRYQSSLNYVFLDKKEEYQDKVGIKG 394 (406) Q Consensus 366 ~~gd~~~~~~n~~~~~~~~~~~~~~~~~~ 394 (406) |+- ..-+..+..++..-+ . T Consensus 470 ~d~---------~~e~~~~~ie~~g~~-~ 488 (488) T protein:vir:96 470 GDM---------SKEEFDEHIAELGFG-M 488 (488) T ss_pred ccC---------CHHHHHHHHhhcCCC-C Confidence 111 000000000000000 0 No 248 >protein:vir:101418 Length: 569 # NCBI annotation: Prt # Family: family:all:9458 # MgeID: mge:1512 # MgeName: P1 # Cross-refs: genbank:acc:YP_006480;genbank:gi:46401636;genbank:GeneID:2777482 Probab=50.04 E-value=0.62 Score=21.72 Aligned_cols=391 Identities=14% Similarity=0.054 Sum_probs=143.9 Q ss_pred CcccccccCCCCcchhhHH----HhhcCCcccccchhh-------hhccHHHHHHHHHHHH-hhcc-----ceeEEEe-- Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYIS----SVLAGDVSQKYLGVS-------ALKNSDILTATSIIAG-DIAR-----FPLVKKD-- 61 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-------a~~~~~v~~~i~~ia~-~ia~-----~~~~~~~-- 61 (406) |++.--+.....+..+.+. .++... ....++.. ....|.|.++.++=.. +++. .-+.+.. T Consensus 53 ~~~~~~~~~~~t~~~D~~~~g~~~~~~~~-~~pr~R~qiY~~~eeM~~~p~Ia~AlniHVtaALggde~TGd~vfI~p~~ 131 (569) T protein:vir:10 53 SGFLGGKPGDSGMAGDGLVDGSRFIFDEV-QLPEDRLQRYPLLEEMAVYSTIATALNIHITHALSFDKKTGQTFSIVPVH 131 (569) T ss_pred hhhhccCccccchhhhhHHHHHHHHhhhc-cCchhHHHHHHHHHHHhcCchhhhhhhhhhheeecccccccceEEEEeec Confidence 3333222211111111111 111000 00111111 1234444444443111 1100 0011110 Q ss_pred cCC--cccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEE---eecCCeeEEEEEccCcc Q lcl|Aclame:pro 62 VNG--DIIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQF---QFYRPSETTVEETDNHE 136 (406) Q Consensus 62 ~~~--~~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l---~~l~p~~~~~~~~~~g~ 136 (406) ..+ +......+..-|...--+..+ .-...+..+++.+|.+|+.|-.+...| ++.+ +...|.-+++.... |+ T Consensus 132 ~~~~a~~daakai~~el~~dl~~~iN--r~~~~lA~~~~aFGdsYaRiY~~~~~G-V~dl~~s~yt~PsfIqpFE~g-~~ 207 (569) T protein:vir:10 132 NGNDSDYDAAQALCGELMNDIGRTIN--KEVAGWAFIMSVFGVAYVRPYAKEGIG-ITSFECSYYTLPSFIKEFEVS-GN 207 (569) T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHH--HHhhHHHHHHHhhhhhheeeeccCCce-eEEEEecccccccccchhhhc-Cc Confidence 001 111111122222111111111 335677888999999999987765544 3333 34556666554322 22 Q ss_pred eEEEEE---eecCCeEEEEcceeeEeeccCC----------------------------C-CCccccCHHHHHHHHHHHH Q lcl|Aclame:pro 137 IVYTFT---DMLTAKQVKCFAHDVIHWKFFS----------------------------H-DTILGRSPLLSLGDEIDLQ 184 (406) Q Consensus 137 ~~~~~~---~~~~g~~~~~~~~~vih~r~~~----------------------------~-~~~~G~s~~~~~~~~i~~~ 184 (406) .+-... .........+.+.+++.+|.+. . ...+|-|=+..+.+..... T Consensus 208 tvGF~~~~~~~~~~ti~~l~p~qm~rmKmPrm~~i~q~~~v~~g~~~~~L~~d~~~~~Pi~psn~GgSFL~~ae~pf~~l 287 (569) T protein:vir:10 208 LAGFSGDYLKDASGKMVFADPWAIIPMKIPYWRPKSNLMPVHTGHKAYSLLDNPEERTPIETQNYGTSLLEYAYEPYMNL 287 (569) T ss_pred eEEeecccCCccccceeeechhhhhhhcccceeeccccchhhhhhhheeecccccccccccchhhhhHHHHHHHhHHHHH Confidence 211111 1111111222333333322111 0 1236777777776665444 Q ss_pred HHHHHHHHH-HHhcCCCcceEEeecCCCCHHHH-----------HHHHHHHHHHhccccc------CceeeccCCceeee Q lcl|Aclame:pro 185 TGGINTLIK-FFKDGFSSGILTMKGAQLSGDAR-----------QRARQEFEKMREGSVG------GSPLVFDSTMEYTP 246 (406) Q Consensus 185 ~~~~~~~~~-~~~ng~~~~~~~~~~~~~~~e~~-----------~~~~~~~~~~~~g~~~------~~~~vl~~g~~~~~ 246 (406) ..+...... -+.....-.++-..-..+++.+. ++.++++++...|.+. |-+.+.++|--..+ T Consensus 288 ~~Al~sL~~qri~dSv~~~~Itlnm~gM~p~qr~~y~r~lt~~LKr~~d~ie~a~~gg~~~~~~~~H~LPv~gekq~~~t 367 (569) T protein:vir:10 288 RSAIRSLKATRFNASKIDRIIGLAMNSLDPVKAADYSRTITQTLKRAADLMERRARGANNMPTVTNTLLPIMGDGKGQMT 367 (569) T ss_pred HHHHHhccchhhHHHHHhHHhhccccCCCHHHHhHHHHHHHHHHHHHHHHHHHHhccCccccccceeeeeeecCcccccc Confidence 333322221 11111222233334445555543 4556667777655432 11223344332222 Q ss_pred --ccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhccc-------ccch----hHHH-HHHHHHHHHHHHHHHHHHHH-HH Q lcl|Aclame:pro 247 --LEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVN-------SPNQ----SVAQ-LMEDYVTNDLPFYFDAITSE-LG 311 (406) Q Consensus 247 --l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~-------~~~~----n~~~-~~~~~~~~~i~P~~~~ie~~-l~ 311 (406) ...-+++.-=+|-.-+..+.+|.++|+.+++||.. +.+. .++. ++..+++..+.-++..+-+. +. T Consensus 368 vDt~~~~A~~~gIEdvM~~~R~LagaLGlD~SMlGwAD~LsGGLGeGG~frtSaQaa~RS~~iRqa~~e~in~iidiH~~ 447 (569) T protein:vir:10 368 IDTQTIQADINGIEDILTYMRQLAAALGLDYTLLGWADQMSGGLGEGGFLRTAIQAAMRASWIQQGVEEFIQRAIDIHLA 447 (569) T ss_pred ccccccccCcccHHHHHHHHHHHHhhhccchhHhhHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh Confidence 22233444445667788899999999999999842 1222 2222 33355555555544444332 22 Q ss_pred hhc---cCccchhhhhhhhcc--cchh-------HHHHHHHH-------HHHhCCCcCHHHH--H----HHhCCCCCCCC Q lcl|Aclame:pro 312 LKT---LNDKDRRLYHIEFDT--RSVT-------GRNVDEIV-------KLVNNQILTPNQG--L----VELGKQKSTDP 366 (406) Q Consensus 312 ~~l---~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~-------~~~~~g~~t~NE~--R----~~~g~~p~~~~ 366 (406) .|. |++.+ +-|.++|.. .+.. ..++..+. .+-.+.++--||. | +.+|++. . T Consensus 448 fKYgevf~~~d-rP~~V~F~s~~tAl~~E~~~n~~~raN~a~i~~Q~la~l~e~n~Lg~de~~m~y~l~d~~~~De---~ 523 (569) T protein:vir:10 448 FKYGKVYPEGD-RPYKIEFHSVNTALQQEHNDNRDSQANYATIVTQILDAVSNNSVLANSDAFKRYLFSDVLEIDE---K 523 (569) T ss_pred hhcCcccCCCC-cceEEEeccchHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHhhcch---h Confidence 222 32222 335666642 1111 12222222 2223333333331 1 1123321 1 Q ss_pred CCCeeeeccCccchhhc-------cccccc-----cCcccCCCccC Q lcl|Aclame:pro 367 NMDRYQSSLNYVFLDKK-------EEYQDK-----VGIKGKGGEVN 400 (406) Q Consensus 367 ~gd~~~~~~n~~~~~~~-------~~~~~~-----~~~~~~gg~~~ 400 (406) -.|.+..-.---|.|.. ..++.. .+.-.+|.|++ T Consensus 524 ~~e~l~ae~~akp~DEe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (569) T protein:vir:10 524 ISEALVNELKAKSEDDDHLMDSIIKTPPQELAQILESVFKEGNDND 569 (569) T ss_pred HHHHHHhhcCCCcchhHHHHHHHhcCChHHHHHHHHHHhhccCCCC Confidence 11111100000011110 000000 01112333333 No 249 >protein:vir:78696 Length: 542 # NCBI annotation: head to tail connector # Family: family:all:481 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285446;genbank:gi:148724480;genbank:GeneID:5220167 Probab=48.58 E-value=0.66 Score=21.55 Aligned_cols=378 Identities=10% Similarity=0.043 Sum_probs=145.1 Q ss_pred Ccc-----cccccCCCCcchhhHHHhh---cCCcc-----cccchhhhhccHHHHHHHHHHHHhhcc------ceeEEEe Q lcl|Aclame:pro 1 MSF-----FQPLGTSKVSYDDYISSVL---AGDVS-----QKYLGVSALKNSDILTATSIIAGDIAR------FPLVKKD 61 (406) Q Consensus 1 M~~-----f~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~a~~~~~v~~~i~~ia~~ia~------~~~~~~~ 61 (406) |-- |+.+++.+.++...+.+.. -.+.. ..-....-.-.++.-.|++.+|..+.+ -||.-.. T Consensus 1 mk~~a~~r~~~l~~~R~~~e~~w~e~~~y~lP~~~~~~~~~~~~~~~~~~dstg~~a~~~Laa~l~~~ltpp~~~WF~l~ 80 (542) T protein:vir:78 1 MKGLAQARYSAMRADREDFLDMARRCAALTLPYLLTEDGHASGGRLQQPYQSLGSKGVNALSSKLMLSLFPIQTSFFKLQ 80 (542) T ss_pred ChhHHHHHHHHHHHHhhHHHHHHHHHHHHhccccCCCCCCcccccccccccchHHHHHHHHHHHHHHhhcCCCCcccccc Confidence 553 2334455555554333221 11100 000000011233444566666655433 2454333 Q ss_pred cCC---------ccc----ccchHH---HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCe Q lcl|Aclame:pro 62 VNG---------DII----HDEDIN---YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPS 125 (406) Q Consensus 62 ~~~---------~~~----~~~~~~---~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~ 125 (406) ... ... ....+. +.+...- ..-+.+.=+..++.++..+||+++|+..+. ...+|+. T Consensus 81 ~~d~~l~~~~~~~~~~~~~v~~~L~~ve~~~~~~l-~~snf~~~~~~~~~~L~~~G~a~l~~~~~~-----~~~~pl~-- 152 (542) T protein:vir:78 81 INDAEIASVPELTPEVRSEIDMNLSKMEKMVMQQI-AESSDRVQLTAAMKHLIVTGNVLVFAGKKT-----LKVYPLD-- 152 (542) T ss_pred CCHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHHHHhhCeEEEEecCCC-----ceEEecc-- Confidence 211 000 111111 1111111 122445666677888999999998765432 2344543 Q ss_pred eEEEEEccCcceEEE--------------------------------------------------------------EEe Q lcl|Aclame:pro 126 ETTVEETDNHEIVYT--------------------------------------------------------------FTD 143 (406) Q Consensus 126 ~~~~~~~~~g~~~~~--------------------------------------------------------------~~~ 143 (406) ...+..+..|++.-. +.. T Consensus 153 ~y~v~~d~~G~vd~v~r~~~~t~~ql~~~fg~~~l~~~~~~~~~~~~~~~~~v~~~v~pr~~~~~~~~~~~~~~~~s~~~ 232 (542) T protein:vir:78 153 RYVIERDGDGNVIEIITRELVDRSLLPAEFQKQSLLEGKDSNAVGEDGPKFGVAQGKGGRNDAEVFTCCKLVDGQHRWHQ 232 (542) T ss_pred eeEEeeCCCCCeEEEeeeeecCHHHHHHhhccccCchHHHhhccccCCCeEEEEEEeecccCCccccccccCCCeEEEEE Confidence 233334444432111 111 Q ss_pred ecCCeEE-------EEcceeeEeeccCCC-CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHH Q lcl|Aclame:pro 144 MLTAKQV-------KCFAHDVIHWKFFSH-DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDA 215 (406) Q Consensus 144 ~~~g~~~-------~~~~~~vih~r~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~ 215 (406) ...|..+ .|..-..+-.|+... ...||.||.+-+...+...+.+.+...........|.+++..++...+.. T Consensus 233 e~~g~~v~~~~~e~g~~~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~pp~lv~~~g~~~~~~ 312 (542) T protein:vir:78 233 ECDGKEIKGSRSSSPLKHSPWLPLRFNVVDGESYGRGRVEEFFGDLSSLDALTRSLIEGSAAAAKVVFMVSPSATTKPQS 312 (542) T ss_pred EeccccccccccccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccccchhh Confidence 1111100 011111222333322 34899999999999999999999999998888888876665544443222 Q ss_pred HHHHHHHHHHHhcccccCceeeccCCceeeeccC-ChhHHHH-HHHHHHHHHHHHHHhcCCHHHhcccccchhHHH--HH Q lcl|Aclame:pro 216 RQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEI-DTNVLQL-ITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQ--LM 291 (406) Q Consensus 216 ~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~-~~~d~~~-~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~--~~ 291 (406) . ..|.+ | .++-..+-++.++.. ++.+++. .+..+..+..|..+|-+.. .. .+..-+.++ .+ T Consensus 313 ~----------~~~~~-g-~iv~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~rI~~aFl~~~-~~--d~~rvTAtEV~~r 377 (542) T protein:vir:78 313 L----------ARAGT-G-AIIQGRAEDVSVVQANKGADFRTVQEMIRDLSQRISDAFLILN-VR--QSERTTATEVREV 377 (542) T ss_pred c----------ccCCC-c-eeecCCccceeeeecccccchhHHHHHHHHHHHHHHHHhcccc-cC--CcccccHHHHHHH Confidence 1 12222 1 222222233333322 2334443 3556677778888885421 11 111112222 11 Q ss_pred HHHHHHHHHHHHHHHHHHHHh-------------hccCccchhhhhhhhcccchhHHH---HHHHH---HHH-hC-C--- Q lcl|Aclame:pro 292 EDYVTNDLPFYFDAITSELGL-------------KTLNDKDRRLYHIEFDTRSVTGRN---VDEIV---KLV-NN-Q--- 347 (406) Q Consensus 292 ~~~~~~~i~P~~~~ie~~l~~-------------~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~-~~-g--- 347 (406) ..-....|.|....++++|-. .++++.....+.+++...-....+ .+.+. ..+ +. | T Consensus 378 ~~E~~~~LG~v~~rl~~E~L~Pli~R~~~il~r~g~lP~~p~~lv~~~~~s~La~~~r~~~~~~l~~~~~~i~~~~~p~~ 457 (542) T protein:vir:78 378 QMELDRQLSGIYGSLTVELLTPYLNRKLHLMQRSKQLPSLPKGLVMPTVVAGLGGVGRGEDRAALIEFMQTVGQAMGPEA 457 (542) T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhceeeeeechHHHHHHHHHHHHHHHHHHHHHHhcCChh Confidence 223334455555555544432 223333222233333221100011 11111 111 10 0 Q ss_pred ---CcCHHH----HHHHhCCCCCCCCCCCeeeeccCcc----------chhhccccccc-cCccc------CCCccCCCC Q lcl|Aclame:pro 348 ---ILTPNQ----GLVELGKQKSTDPNMDRYQSSLNYV----------FLDKKEEYQDK-VGIKG------KGGEVNAEE 403 (406) Q Consensus 348 ---~~t~NE----~R~~~g~~p~~~~~gd~~~~~~n~~----------~~~~~~~~~~~-~~~~~------~gg~~~~~~ 403 (406) .+..++ +.+.+|.|+.. .+..+.-.. ........... ..... .+..+++.+ T Consensus 458 l~~~id~d~~~~~~a~~~Gvp~~~-----i~~s~e~~~~~~~q~q~~~~~~al~~~a~~~a~~~~~~~~~~~~~a~~~~~ 532 (542) T protein:vir:78 458 LQQFIDPTEFLKRLAAASGIDTLN-----LVKSPETMANEAQQAQQQQMTASLMGQAGQLAKSPIGEKMMQQINAPGQEA 532 (542) T ss_pred HHhcCCHHHHHHHHHHHcCCCHhh-----ccCCHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccchhhhcCCCCcCC Confidence 122222 23334555310 000000000 00000000000 00000 000111111 Q ss_pred CCC Q lcl|Aclame:pro 404 DKS 406 (406) Q Consensus 404 ~~~ 406 (406) ... T Consensus 533 ~~~ 535 (542) T protein:vir:78 533 PAG 535 (542) T ss_pred CCC Confidence 111 No 250 >protein:vir:99672 Length: 532 # NCBI annotation: Head-to-tail joining protein # Family: family:all:481 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249587;genbank:gi:68299738;genbank:GeneID:3799987 Probab=46.49 E-value=0.73 Score=21.32 Aligned_cols=382 Identities=10% Similarity=0.025 Sum_probs=143.3 Q ss_pred Ccc--------------cccccCCCCcchhhHHHh---hcCC-----cccccchhhhhccHHHHHHHHHHHHhhcc---- Q lcl|Aclame:pro 1 MSF--------------FQPLGTSKVSYDDYISSV---LAGD-----VSQKYLGVSALKNSDILTATSIIAGDIAR---- 54 (406) Q Consensus 1 M~~--------------f~~~~~~~~~~~~~~~~~---~~~~-----~~~~~~~~~a~~~~~v~~~i~~ia~~ia~---- 54 (406) |.= |..+++.+.++...+.+. +-.. ....-....-.-.++.-.|++.+|..+.+ T Consensus 1 m~~~~~~~~~~~~~~~r~~~l~~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~~~~dst~~~a~~~LAa~L~~~ltp 80 (532) T protein:vir:99 1 MAEVEKTGFAADGAAAAYNRLKNDRGAYETRAEDCATYTIPSVFPSATADGSTSYTTPWQSIGARGLNNLASKLMLALFP 80 (532) T ss_pred CcchhhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhcccCCCCCcchhhccccccchHHHHHHHHHHHHHHhhcC Confidence 432 222333334444322221 1111 11000101112244455666666666533 Q ss_pred --ceeEEEecCCc------------ccccchHHH---HhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC-Cce- Q lcl|Aclame:pro 55 --FPLVKKDVNGD------------IIHDEDINY---LLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK-TNQ- 115 (406) Q Consensus 55 --~~~~~~~~~~~------------~~~~~~~~~---lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~-~g~- 115 (406) -||.-...... ......|.. .+. .--..-+.+.-+..++.++..+||+..|+..+.. .++ T Consensus 81 p~~~WF~l~~~d~~l~~~~~~~~~~~~v~~~L~~ve~~~~-~~~~~snf~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~~ 159 (532) T protein:vir:99 81 VGSSFFKLNVSELEVKQSITSPEELTEIATGLAMVERICM-NYMESNSFRPTLHAAIKQLLVAGNVLLYIPSTEQVEGQS 159 (532) T ss_pred CCCccccccCCHHHHhccCCChhhHHHHHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHHHHhHCcEeEEecccccccCcc Confidence 24543322110 001111111 111 1112234556667778888999999988765321 122 Q ss_pred -eEEEeecCCeeEEEEEccCcceEEEE-------------------------------------EeecCCeEEE----Ec Q lcl|Aclame:pro 116 -ALQFQFYRPSETTVEETDNHEIVYTF-------------------------------------TDMLTAKQVK----CF 153 (406) Q Consensus 116 -~~~l~~l~p~~~~~~~~~~g~~~~~~-------------------------------------~~~~~g~~~~----~~ 153 (406) ....+|+. .+.+..+..|++.-.+ ....++.... +. T Consensus 160 ~~f~~~pl~--~y~v~~d~~G~v~~ivrr~~~~~~~l~e~~~~~~~~~~~~~~p~~~v~v~~~v~~~~~~~~~~~~~~~~ 237 (532) T protein:vir:99 160 NAPKLYKLH--NFVVERDAYDNVLQIVTEDKIARAALPEDVRKSLEDAQGDQNPSEEVTIYTHVYRDPEAMVFRSYQEID 237 (532) T ss_pred cceEEEEcC--eEEEeeCCCCCeeeEeeeeeecHHhcChHHHHHhhccccccCCCcceEEEEEEEecCCCCeeEEEEeec Confidence 23334442 3333344444321110 0001111000 00 Q ss_pred ce--------------eeEeeccCCC-CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHH Q lcl|Aclame:pro 154 AH--------------DVIHWKFFSH-DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQR 218 (406) Q Consensus 154 ~~--------------~vih~r~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~ 218 (406) .. ..+-.|+... ...||.||.+-+...+...+.+.+...........|..++...+...+... T Consensus 238 g~~~~~~~~~~~~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~~-- 315 (532) T protein:vir:99 238 GEIVAGTEGEYPLDSCPWIPVRLIKMPNEDYGRSFVEEYLGDLKSLENLYEAIVKMSMISSKVLFFVNPNGVTQIRRV-- 315 (532) T ss_pred CceecccccccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeccccccchhhh-- Confidence 00 1122232222 348999999999999999999999888877777777766665544433221 Q ss_pred HHHHHHHHhcccccCceee--ccCCceeeeccCChhHHHH-HHHHHHHHHHHHHHhcCCHHHhcccccchhHHHH--HHH Q lcl|Aclame:pro 219 ARQEFEKMREGSVGGSPLV--FDSTMEYTPLEIDTNVLQL-ITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQL--MED 293 (406) Q Consensus 219 ~~~~~~~~~~g~~~~~~~v--l~~g~~~~~l~~~~~d~~~-~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~--~~~ 293 (406) ..+.+ | .++ ..+++...++... .+++. .+..+..+..|..+|-+.. +....+..-+.++- +.. T Consensus 316 --------~~~~~-g-~~v~g~~~~i~~~~~~~~-~~~~~~~~~i~~~~~rI~~af~~~~-~~~~d~~r~TAtEV~~r~~ 383 (532) T protein:vir:99 316 --------AKANT-G-DFVAGRKQDVEVFQLEKY-NDFQVAKATADDIEKRLSYAFMLNS-AVQRGGDRVTAEEIRYVAG 383 (532) T ss_pred --------ccCCC-c-ceecCCcccceeeecccc-cchhHHHHHHHHHHHHHHHHHhhhh-cccCCCCcccHHHHHHHHH Confidence 12222 1 112 1233334443332 33433 3456677778888885542 11111111122221 112 Q ss_pred ------------HHHHHHHHHHHHHHHHHHh-hccCccchhhhhhhh--cccchhHH-HHHHHHHHH----hC-----CC Q lcl|Aclame:pro 294 ------------YVTNDLPFYFDAITSELGL-KTLNDKDRRLYHIEF--DTRSVTGR-NVDEIVKLV----NN-----QI 348 (406) Q Consensus 294 ------------~~~~~i~P~~~~ie~~l~~-~l~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~----~~-----g~ 348 (406) +....+.|++...=..+.+ .+|++.......... -+..+-+. +++.+...+ +. -. T Consensus 384 E~~~~LGpv~~rl~~E~l~Pli~r~~~il~r~g~lP~~p~~~~~~~iv~~is~Laraq~~~~l~~~~~~laq~~p~~~d~ 463 (532) T protein:vir:99 384 ELEDTLGGVYSLLSQELQLPLVKILLKELQATSKIPNLPKEAVEPAIATGLEALGRGHDLNKLNVFIDYMIKLAGLQDDD 463 (532) T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhcccceeecchHHHHHHHHHHHHHHHHHHHhhcchhhhh Confidence 3344445554443333322 234332221111111 11111111 111111111 10 01 Q ss_pred cCHH----HHHHHhCCCCCCCCCCCeeeecc-Cccchhhcccc-c---------cccCcc---cCCCccCCCCCC Q lcl|Aclame:pro 349 LTPN----QGLVELGKQKSTDPNMDRYQSSL-NYVFLDKKEEY-Q---------DKVGIK---GKGGEVNAEEDK 405 (406) Q Consensus 349 ~t~N----E~R~~~g~~p~~~~~gd~~~~~~-n~~~~~~~~~~-~---------~~~~~~---~~gg~~~~~~~~ 405 (406) +..+ ++.+.+|.+|.. ++.+. -..-+-..... + ....+. ..-...++-+.+ T Consensus 464 id~d~~~~~~a~~~GV~~~~------i~r~~ee~~~~~~q~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (532) T protein:vir:99 464 INLLDVKMRLANSLGMDTTG------LILTQQDKQAKMAEASTAAGMVTAGQQMGAAGGQAAAAMMQQQAGMPTQ 532 (532) T ss_pred CCHHHHHHHHHHHhCCChhh------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHhhcCCCCC Confidence 2222 233344554310 11110 00000000000 0 000000 000111222222 No 251 >protein:vir:81017 Length: 521 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469501;genbank:gi:157311458;genbank:GeneID:5602316 Probab=44.40 E-value=0.81 Score=21.09 Aligned_cols=383 Identities=10% Similarity=0.062 Sum_probs=160.1 Q ss_pred Ccccccc---------cCCCCcchhh-----H--H-------Hhh-cCCcccccch--------------hhhhccHHHH Q lcl|Aclame:pro 1 MSFFQPL---------GTSKVSYDDY-----I--S-------SVL-AGDVSQKYLG--------------VSALKNSDIL 42 (406) Q Consensus 1 M~~f~~~---------~~~~~~~~~~-----~--~-------~~~-~~~~~~~~~~--------------~~a~~~~~v~ 42 (406) |++|-.. +.+..|+..+ . . ... +|....++.- ++.+.+|.|. T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~s~~~P~~~dGa~~i~~~~~~~~~~~gg~~~~~~~~e~~~~~~~eLI~~YR~ma~~pEvd 87 (521) T protein:vir:81 8 LARWADFDNDKYEEQIKDKAESIAAPKNNDGATEVEINDNLPASAWNSLTQQFYSTDQKISTTKQLVNTYRGLMNNHEVE 87 (521) T ss_pred hHhhcCchhhhHHhhhccCccccccCCCCCCceEecccCCCcceeecceeeeecccccchhhHHHHHHHHHHHhhccchh Confidence 7765221 1111111110 0 0 000 0111111110 1246789999 Q ss_pred HHHHHHHHhhccc-----eeEEEecCCc------ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecC Q lcl|Aclame:pro 43 TATSIIAGDIARF-----PLVKKDVNGD------IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDP 111 (406) Q Consensus 43 ~~i~~ia~~ia~~-----~~~~~~~~~~------~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~ 111 (406) +||+-|.+.+.-+ |+.+.=.+.+ ........++|+. -+-...+ ..++..|.+.|..|..++.+. T Consensus 88 ~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~fhkiid~ 162 (521) T protein:vir:81 88 NAVQNIVNDAIVFEEGHEVVSLNLEATGFSESVKERIHEEFKDLLNT-IQFDRRG----QDMFRRWYVDSRIFFHKIIGK 162 (521) T ss_pred hHHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceEEEEEEEcC Confidence 9999999887644 3333211111 0111233344431 2223333 445667788999999888652 Q ss_pred -CCceeEEEeecCCeeEEEEEccC-----c-c-----eEEEEEee------------cCCeEEEEcceeeEeecc--CCC Q lcl|Aclame:pro 112 -KTNQALQFQFYRPSETTVEETDN-----H-E-----IVYTFTDM------------LTAKQVKCFAHDVIHWKF--FSH 165 (406) Q Consensus 112 -~~g~~~~l~~l~p~~~~~~~~~~-----g-~-----~~~~~~~~------------~~g~~~~~~~~~vih~r~--~~~ 165 (406) ...-+.++..|+|..++.++... | . .-|+++.+ ..+..++++.+-|.+... .+. T Consensus 163 ~pk~GI~Elr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~vkI~~dAI~y~hSGl~d~ 242 (521) T protein:vir:81 163 NPKDGIVELRQLDPRNLEYVREIITEDTPEGKIYKATKEYFIYTVGNSSYCAGGQVFSPNSRVKIPRSAITYAHSGLMDC 242 (521) T ss_pred CccccceeeeeeCCcceeeeeeecccccCccceecceeeeeeeecCCccccccceeecCCcceeechhheeeeeccceeC Confidence 12458899999999987653321 1 1 11122111 122344555554443321 122 Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHh---------ccc---cc Q lcl|Aclame:pro 166 DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMR---------EGS---VG 232 (406) Q Consensus 166 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~---------~g~---~~ 232 (406) ++-.-+|-+..|...+....-+.....-+-=..++-.-++ .-.+.+-+...++....+-..+ +|. +. T Consensus 243 ~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlpk~KAeqYl~~im~k~kNklvYDa~TGev~ddr 322 (521) T protein:vir:81 243 DDKYIIGYLHRAVKPANQLKLLEDAMVVYRITRAPERRVFFIDTGNMNNRKAAQHMNSVAQSFKNRVVYDASTGKLKNQQ 322 (521) T ss_pred CCCeeeecchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeecccccccccc Confidence 3333457777777777666666655554432333333333 3334444333333333322222 232 11 Q ss_pred Cceeec----------cCCceeeeccC--ChhHHHHHHHHHHHHHHHHHHhcCCHHHhccccc-----chhHH-----HH Q lcl|Aclame:pro 233 GSPLVF----------DSTMEYTPLEI--DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSP-----NQSVA-----QL 290 (406) Q Consensus 233 ~~~~vl----------~~g~~~~~l~~--~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~-----~~n~~-----~~ 290 (406) ..+..+ ..|.+++.|.- +.-+|+ -.++..+.+.++++||.+-|+..++ +...| =. T Consensus 323 k~msMlEDyWLpRReGgrgTEItTLpGgqnlgem~---DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDEiK 399 (521) T protein:vir:81 323 ANLSMTEDYWLQRRDGKAITDVTTLPGASGMSDID---DIRYFNRKLYEALRVPLSRSNLSDANMVIGGDGSEITRDELE 399 (521) T ss_pred cccchhhhhcccccCCCcccceeecccCCCCChHH---HHHHHHHHHHHHhCCccccccCCCCcceeccccchhhHHHHH Confidence 112222 24677777753 334444 4456778899999999999954322 11111 11 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC-----ccchh----hhhhhhcccc---------hhHHHHHHHHHHHh--CCCcC Q lcl|Aclame:pro 291 MEDYVTNDLPFYFDAITSELGLKTLN-----DKDRR----LYHIEFDTRS---------VTGRNVDEIVKLVN--NQILT 350 (406) Q Consensus 291 ~~~~~~~~i~P~~~~ie~~l~~~l~~-----~~~~~----~~~~~~~~~~---------~~~~~~~~~~~~~~--~g~~t 350 (406) ...|+..-=.-+...+.+.|...|+. ..++. .+.++|..+. .+..|+..+..+-. +-.++ T Consensus 400 F~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~s 479 (521) T protein:vir:81 400 FSKFIRTRQSQFSEVLRDPLKYNLILKNVITEDDWDREINNIKVVFHRDSYYTEVKDAEILERRIGLIERITPYIGKYFS 479 (521) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEEeecchHHHHHHHHHHHHHHHHHHHhhhhhccccc Confidence 22333332223333444444444432 22322 2233332221 22334444433211 22445 Q ss_pred HHHHHHH-hCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCccCCCCCC Q lcl|Aclame:pro 351 PNQGLVE-LGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 351 ~NE~R~~-~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~~~~~~~ 405 (406) .+=+|+. |.+.-.+-..-++.. + ......--+ ..+.+.++= T Consensus 480 ~dyi~k~ILr~tDeei~~~~k~I--------~-----~E~~~~~~~-~p~~~~~~f 521 (521) T protein:vir:81 480 NQTVMRDILKYTDDQMDTEKKQI--------E-----EEANDPRFK-QTPDEIEDF 521 (521) T ss_pred hHHHHHHHhccCHHHHHHHHHHH--------H-----HHhhCCCCC-CCcccccCC Confidence 5555543 332210000000000 0 000000000 001111111 No 252 >protein:vir:108049 Length: 524 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595296;genbank:gi:161622602;genbank:GeneID:5783768 Probab=42.72 E-value=0.87 Score=20.91 Aligned_cols=380 Identities=9% Similarity=0.044 Sum_probs=163.1 Q ss_pred Ccccccc---------cCCCCcchhh------------HHHhhcCCcc-c-cc--ch------------hhhhccHHHHH Q lcl|Aclame:pro 1 MSFFQPL---------GTSKVSYDDY------------ISSVLAGDVS-Q-KY--LG------------VSALKNSDILT 43 (406) Q Consensus 1 M~~f~~~---------~~~~~~~~~~------------~~~~~~~~~~-~-~~--~~------------~~a~~~~~v~~ 43 (406) ++||-+. +.+..|+... ......+..+ . ++ .. ++.+.+|.|.. T Consensus 11 f~f~~~~de~~~~~~~~~~~~S~~~p~~~dGa~~I~~~~~~~~~~~~~q~~y~~~e~~~~~~~eLI~~YR~ma~~pEvd~ 90 (524) T protein:vir:10 11 LKPWANEDEKEYKQQINNNLESVTAPKLDDGAREIETQEQNIPYNALMQQMFGSNEPEVKNTRELIDTYRNLMNNYEVDN 90 (524) T ss_pred hhhhhcchhhhhhhhhccCCCccccCCCCCCceeeccCcccccchhhhhhhhhcccchhhhHHHHHHHHHHHhhccchhh Confidence 5555321 1111111100 0000000000 0 10 00 12467899999 Q ss_pred HHHHHHHhhccc-----eeEEEecCCc------ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC Q lcl|Aclame:pro 44 ATSIIAGDIARF-----PLVKKDVNGD------IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK 112 (406) Q Consensus 44 ~i~~ia~~ia~~-----~~~~~~~~~~------~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~ 112 (406) ||+.|.+.+.-+ |+.+.=.+.+ ........++|+. -+-...+ ..++..|.+.|..|..++.|.. T Consensus 91 Av~eIVneaiv~d~~~~pV~l~Ld~~~~s~siK~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~fHkiid~~ 165 (524) T protein:vir:10 91 AVQEIVSDAIVYEDDKEVVALNLDGTDFSQSIKDKILAEFSEVLNL-LNFQRKG----TDHFQRWYVDSRIFFHKIINPK 165 (524) T ss_pred HHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhheeeceEEEEEEeeCC Confidence 999999887644 3333211111 0111233344431 2223333 4456677889999988876533 Q ss_pred C--ceeEEEeecCCeeEEEEEc-----cCcc------eEEEEEe------------ecCCeEEEEcceeeEeecc--CCC Q lcl|Aclame:pro 113 T--NQALQFQFYRPSETTVEET-----DNHE------IVYTFTD------------MLTAKQVKCFAHDVIHWKF--FSH 165 (406) Q Consensus 113 ~--g~~~~l~~l~p~~~~~~~~-----~~g~------~~~~~~~------------~~~g~~~~~~~~~vih~r~--~~~ 165 (406) . .-+.++..|+|..++..+. ..|. .-|+++. ...+...+++.+.|+|... .+. T Consensus 166 ~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~~~~~~~~~~~~~~ikI~~dAIvy~~SGL~d~ 245 (524) T protein:vir:10 166 KMKDGVQELRRLDPRQVQYIREIVTRMEDGVKIVDGYREFFVYDTGHESYCADGRIYSAGTKVKIPRAAVVYAHSGLLDC 245 (524) T ss_pred CccccceeeeeeCCccceeeeeecccCcccchhhcchhhheeecCCCcccccCcceecCCcceecchhheeeeccCcccC Confidence 2 3588999999999876321 1111 0111111 1233456788888888652 233 Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHh---------ccc--c-c Q lcl|Aclame:pro 166 DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMR---------EGS--V-G 232 (406) Q Consensus 166 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~---------~g~--~-~ 232 (406) ++-.-+|-+..|...+....-+.....-+-=..++-.-++ .-.+.+-+...++....+-..+ +|. + . T Consensus 246 ~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnlPk~KAeqYl~~im~k~kNKlvYDa~TGev~ddr 325 (524) T protein:vir:10 246 CGKNIIGYLQRAIKPANQLKLMEDAMVIYRITRAPDRRVFYIDTGNMPSRKAAAQMQHIMNTMKNRVVYDASTGKIKNQQ 325 (524) T ss_pred CCCceeccchHhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeccCCeeccch Confidence 3334467777777777666666655554432333333333 3334444433444333332222 221 1 1 Q ss_pred Cceeec----------cCCceeeeccC--ChhHHHHHHHHHHHHHHHHHHhcCCHHHhccccc----c-hhHH-HHHHHH Q lcl|Aclame:pro 233 GSPLVF----------DSTMEYTPLEI--DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSP----N-QSVA-QLMEDY 294 (406) Q Consensus 233 ~~~~vl----------~~g~~~~~l~~--~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~----~-~n~~-~~~~~~ 294 (406) .....+ ..|.+++.|.- +.-+| +-.++..+.+..+++||.+-|+..++ . ...| ...+.= T Consensus 326 k~msMlEDyWLpRReGgrgTEItTLpGgqnlgem---~DV~YF~kkLy~aLnVP~sRl~~e~~~~f~~gr~~EItRDEiK 402 (524) T protein:vir:10 326 HNMSMTEDYWLQRRDGKAVTEVDTMPGATGMSDM---DDVLYFRTALYRALRIPESRIPSESNSGVMFDAGTAITRDELK 402 (524) T ss_pred hhhhhHhhhcccccCCCCccceeeccccCCcChH---HHHHHHHHHHHHHhCCCchhccCCCCccccccccchhhHHHHH Confidence 111122 24677777653 33344 44556778899999999999964322 1 1111 111122 Q ss_pred HHHHHHHHHHH----HHHHHHhhccC-----ccchh----hhhhhhcccc---------hhHHHHHHHHHHHh--CCCcC Q lcl|Aclame:pro 295 VTNDLPFYFDA----ITSELGLKTLN-----DKDRR----LYHIEFDTRS---------VTGRNVDEIVKLVN--NQILT 350 (406) Q Consensus 295 ~~~~i~P~~~~----ie~~l~~~l~~-----~~~~~----~~~~~~~~~~---------~~~~~~~~~~~~~~--~g~~t 350 (406) ++..|.-+-.. +.+.|...|+. ..++. .+.++|..+. .+..|+..+..+-. +-.++ T Consensus 403 F~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~s 482 (524) T protein:vir:10 403 FAKWIRQLQNKFEEIFLDPLKTNLILKKIITEDEWEREINNIKVTFNRDSYFSEMKDAEIMERRINMLTMAEPFIGKYIS 482 (524) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcccch Confidence 23333344444 44444444432 23332 2233332221 12334444433211 22445 Q ss_pred HHHHHHH-hCCCCCCCCCCCeeeeccCccchhhccccccccCcccC-CCccCCCCCCC Q lcl|Aclame:pro 351 PNQGLVE-LGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGK-GGEVNAEEDKS 406 (406) Q Consensus 351 ~NE~R~~-~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~-gg~~~~~~~~~ 406 (406) .+=+|+. |.+.-. . ++.. +..-....+ |-=.+-+++++ T Consensus 483 ~~yi~k~ILr~tDe---e------------i~~~---~k~I~~E~k~~~~~~~~~~~~ 522 (524) T protein:vir:10 483 HQTAMKDFLQMTDE---E------------INQE---AKQIEEESKEARFQNPDEEEE 522 (524) T ss_pred hHHHHHHHhccCHH---H------------HHHH---HHHHHHHhhcCCCCCCChhhh Confidence 5555543 332210 0 0000 000000000 00000001111 No 253 >protein:vir:107404 Length: 555 # NCBI annotation: Bbp21 # Family: family:all:481 # MgeID: mge:1537 # MgeName: BPP-1 # Cross-refs: genbank:acc:NP_958690;genbank:gi:41179382;genbank:GeneID:2717198 Probab=42.71 E-value=0.87 Score=20.90 Aligned_cols=384 Identities=10% Similarity=0.022 Sum_probs=151.8 Q ss_pred Ccc----------cccccCCCCcchhhHHHh---hcCC--------cccccchhhhhccHHHHHHHHHHHHhhcc----- Q lcl|Aclame:pro 1 MSF----------FQPLGTSKVSYDDYISSV---LAGD--------VSQKYLGVSALKNSDILTATSIIAGDIAR----- 54 (406) Q Consensus 1 M~~----------f~~~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~----- 54 (406) |-= |+.+++.+.++...+.+. .-.. ....-....-.-.++...|++.+|..+.+ T Consensus 1 M~~~~~~~~l~~r~~~l~~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~~~~~~~dst~~~a~~~LAa~L~~~ltpp 80 (555) T protein:vir:10 1 MAEQTERKLLLSRWGQLRTERESWMSHWKEISDYLLPRAGRFFVQDRNRGEKRHNNILDNTGTRALRVLAAGMMAGMTSP 80 (555) T ss_pred CCCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCcccccccCCCCCcchhcccccccccHHHHHHHHHHHHHHhhcCC Confidence 431 223334444444333222 1111 10000101112244455666666666533 Q ss_pred -ceeEEEec-CCcccccchHHH-------HhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCe Q lcl|Aclame:pro 55 -FPLVKKDV-NGDIIHDEDINY-------LLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPS 125 (406) Q Consensus 55 -~~~~~~~~-~~~~~~~~~~~~-------lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~ 125 (406) -||.-... +.+......+.. .+. .--..-+.+.-+..+..++.++||+.+|+..+.. ....+.+++.. T Consensus 81 ~~~WF~l~~~d~~l~e~~~v~~~L~~ve~~~~-~~l~~snf~~~~~~~~~~Lv~~G~a~l~~~~d~~--~~~rf~~~pl~ 157 (555) T protein:vir:10 81 ARPWFRLTTSIPELDESAAVKAWLANVTRLML-MIFAKSNTYRALHSMYEELGAFGTASSIVLPDFD--AVVYHHSLTAG 157 (555) T ss_pred CCcccccccCcccccchHHHHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHHHHhhCceEEEEecCCC--ceEEEEEeecc Confidence 24533332 211111111111 111 1111233455566778899999999999887654 34455555666 Q ss_pred eEEEEEccCcceEEEEEe--------------------------ecC-CeEEE-----E--------------------- Q lcl|Aclame:pro 126 ETTVEETDNHEIVYTFTD--------------------------MLT-AKQVK-----C--------------------- 152 (406) Q Consensus 126 ~~~~~~~~~g~~~~~~~~--------------------------~~~-g~~~~-----~--------------------- 152 (406) .+.+..+..|++.-.+.. ... ...++ + T Consensus 158 ~~~v~~d~~G~vd~i~r~~~~t~~ql~~~fg~~~l~~~~~~~~~~~~~~~~v~v~~~V~pr~~~~~~~~~~~~~p~~s~~ 237 (555) T protein:vir:10 158 EYAIAADNQGRVNTLYREFQITVAQMVREFGKDKCSTTVQSLFDRGALEQWVTVIHAIEPRADRDPSKRDDRNMAWKSVY 237 (555) T ss_pred eeEEeeCCCCCEEEEEEEEeccHHHHHHhcCcccCCHHHHHHHhcCCCCceEEEEEEEeeccCcCcCCCCccccceEEEE Confidence 666666666654222110 000 00000 0 Q ss_pred ----------------cceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHH Q lcl|Aclame:pro 153 ----------------FAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDA 215 (406) Q Consensus 153 ----------------~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~ 215 (406) ..-..+.+|+...+ ..||.||.+-+...+...+.+.+.......-...|...+.......+ T Consensus 238 ~~~~~d~~~vl~esgy~e~P~i~~Rw~~~~ge~YGrgp~~~~lgD~k~L~~l~~~~l~~~~~~~~pp~~v~~~~~~~~-- 315 (555) T protein:vir:10 238 FEPGADETRTLRESGYRSFRALCPRWALVGGDIYGNSPAMEALGDVRQLQHEQLRKAQAIDYKSNPPLQLPVSAKNQD-- 315 (555) T ss_pred EEeccCCccccccCCcccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeecccccccc-- Confidence 00011222322223 47999999999999999999999888888777777766554332211 Q ss_pred HHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHH-HHHHHHHHHHHHHHhcCCHHH-hcc-cccchhHHH--H Q lcl|Aclame:pro 216 RQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQL-ITSNNFSTAQIAKALRVPSYK-LGV-NSPNQSVAQ--L 290 (406) Q Consensus 216 ~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~-~e~~~~~~~~Ia~~fgvpp~~-lg~-~~~~~n~~~--~ 290 (406) + +..-|... .+..-..+-.+.++-.+..+++. .+..+..+..|-.+|-.+-.. ++. ....-+.+| . T Consensus 316 -------~-~~~pgg~~-~v~~g~~~d~~~~~~~~~~d~~~~~~~i~~~~~rI~~af~~dlf~~l~~~~~~~~TAtEV~~ 386 (555) T protein:vir:10 316 -------I-STVPGGLS-YVDAAAPNGGIRTAFEVNLDLSHLLADIVDVRERIKASFYADLFLMLANGTNPQMTATEVAE 386 (555) T ss_pred -------c-eecccccc-ccccCCCCcceecccccccchHHHHHHHHHHHHHHHHHhhcchhhhccCCCCCcccHHHHHH Confidence 1 11111110 01011112233333222223443 345677778899999766322 221 111112222 1 Q ss_pred HH------------HHHHHHHHHHHHHHHHHHHhh-ccCccch----hhhhhhhcccchhHH-H---HHH-------HHH Q lcl|Aclame:pro 291 ME------------DYVTNDLPFYFDAITSELGLK-TLNDKDR----RLYHIEFDTRSVTGR-N---VDE-------IVK 342 (406) Q Consensus 291 ~~------------~~~~~~i~P~~~~ie~~l~~~-l~~~~~~----~~~~~~~~~~~~~~~-~---~~~-------~~~ 342 (406) +. .+....+.|++...=..+.+. ++++... ..+.+++. ..+-+. + ... +.. T Consensus 387 r~~E~~~~LG~v~~rl~~E~l~Pli~r~~~il~r~g~lP~~P~~l~~~~i~v~yi-s~La~aq~~~~~~~i~~~l~~i~~ 465 (555) T protein:vir:10 387 RHEEKLLMLGPVLERMHNEILDPLIELTFQRMVEANILPPPPQEMQGVDLNVEFV-SMLAQAQRAIATNSVDRFVGNLGA 465 (555) T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhcCceeEEEec-cHHHHHHHHHHHHHHHHHHHHHHH Confidence 12 233444555554444444332 3333211 11222221 111111 1 111 111 Q ss_pred HHhCC-----CcCHH----HHHHHhCCCCCCCCCCCeeeeccCcc-chhhc-cc-cc-----------cccCcccCCCcc Q lcl|Aclame:pro 343 LVNNQ-----ILTPN----QGLVELGKQKSTDPNMDRYQSSLNYV-FLDKK-EE-YQ-----------DKVGIKGKGGEV 399 (406) Q Consensus 343 ~~~~g-----~~t~N----E~R~~~g~~p~~~~~gd~~~~~~n~~-~~~~~-~~-~~-----------~~~~~~~~gg~~ 399 (406) +.+.+ .+..+ .+.+.+|.|+- ++.+..-+ -+-.. .+ .+ ........+.+. T Consensus 466 laq~~P~vld~id~d~~~~~~a~~~Gvp~~-------~irs~eev~~~r~qr~~~~q~~~~a~~~~q~~~~~~~~~~~~~ 538 (555) T protein:vir:10 466 VAGIKPEVLDKFDADRWADTYADMLGIDPE-------LIVPGNQVALIRKQRADQQQAAQQAALLNQGADTAAKLGSVDT 538 (555) T ss_pred HhcCChhhhhcCCHHHHHHHHHHHhCCCcc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc Confidence 11111 12222 23333455431 11111000 00000 00 00 000111122333 Q ss_pred CCCCCCC Q lcl|Aclame:pro 400 NAEEDKS 406 (406) Q Consensus 400 ~~~~~~~ 406 (406) +..+..+ T Consensus 539 ~~~~~~~ 545 (555) T protein:vir:10 539 SKQNALT 545 (555) T ss_pred CcchhHH Confidence 2222222 No 254 >protein:vir:98506 Length: 555 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:481 # MgeID: mge:1592 # MgeName: BMP-1 # Cross-refs: genbank:acc:NP_996583;genbank:gi:45569514;genbank:GeneID:2767834 Probab=42.71 E-value=0.87 Score=20.90 Aligned_cols=384 Identities=10% Similarity=0.022 Sum_probs=151.8 Q ss_pred Ccc----------cccccCCCCcchhhHHHh---hcCC--------cccccchhhhhccHHHHHHHHHHHHhhcc----- Q lcl|Aclame:pro 1 MSF----------FQPLGTSKVSYDDYISSV---LAGD--------VSQKYLGVSALKNSDILTATSIIAGDIAR----- 54 (406) Q Consensus 1 M~~----------f~~~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~----- 54 (406) |-= |+.+++.+.++...+.+. .-.. ....-....-.-.++...|++.+|..+.+ T Consensus 1 M~~~~~~~~l~~r~~~l~~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~~~~~~~dst~~~a~~~LAa~L~~~ltpp 80 (555) T protein:vir:98 1 MAEQTERKLLLSRWGQLRTERESWMSHWKEISDYLLPRAGRFFVQDRNRGEKRHNNILDNTGTRALRVLAAGMMAGMTSP 80 (555) T ss_pred CCCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCcccccccCCCCCcchhcccccccccHHHHHHHHHHHHHHhhcCC Confidence 431 223334444444333222 1111 10000101112244455666666666533 Q ss_pred -ceeEEEec-CCcccccchHHH-------HhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCe Q lcl|Aclame:pro 55 -FPLVKKDV-NGDIIHDEDINY-------LLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPS 125 (406) Q Consensus 55 -~~~~~~~~-~~~~~~~~~~~~-------lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~ 125 (406) -||.-... +.+......+.. .+. .--..-+.+.-+..+..++.++||+.+|+..+.. ....+.+++.. T Consensus 81 ~~~WF~l~~~d~~l~e~~~v~~~L~~ve~~~~-~~l~~snf~~~~~~~~~~Lv~~G~a~l~~~~d~~--~~~rf~~~pl~ 157 (555) T protein:vir:98 81 ARPWFRLTTSIPELDESAAVKAWLANVTRLML-MIFAKSNTYRALHSMYEELGAFGTASSIVLPDFD--AVVYHHSLTAG 157 (555) T ss_pred CCcccccccCcccccchHHHHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHHHHhhCceEEEEecCCC--ceEEEEEeecc Confidence 24533332 211111111111 111 1111233455566778899999999999887654 34455555666 Q ss_pred eEEEEEccCcceEEEEEe--------------------------ecC-CeEEE-----E--------------------- Q lcl|Aclame:pro 126 ETTVEETDNHEIVYTFTD--------------------------MLT-AKQVK-----C--------------------- 152 (406) Q Consensus 126 ~~~~~~~~~g~~~~~~~~--------------------------~~~-g~~~~-----~--------------------- 152 (406) .+.+..+..|++.-.+.. ... ...++ + T Consensus 158 ~~~v~~d~~G~vd~i~r~~~~t~~ql~~~fg~~~l~~~~~~~~~~~~~~~~v~v~~~V~pr~~~~~~~~~~~~~p~~s~~ 237 (555) T protein:vir:98 158 EYAIAADNQGRVNTLYREFQITVAQMVREFGKDKCSTTVQSLFDRGALEQWVTVIHAIEPRADRDPSKRDDRNMAWKSVY 237 (555) T ss_pred eeEEeeCCCCCEEEEEEEEeccHHHHHHhcCcccCCHHHHHHHhcCCCCceEEEEEEEeeccCcCcCCCCccccceEEEE Confidence 666666666654222110 000 00000 0 Q ss_pred ----------------cceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHH Q lcl|Aclame:pro 153 ----------------FAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDA 215 (406) Q Consensus 153 ----------------~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~ 215 (406) ..-..+.+|+...+ ..||.||.+-+...+...+.+.+.......-...|...+.......+ T Consensus 238 ~~~~~d~~~vl~esgy~e~P~i~~Rw~~~~ge~YGrgp~~~~lgD~k~L~~l~~~~l~~~~~~~~pp~~v~~~~~~~~-- 315 (555) T protein:vir:98 238 FEPGADETRTLRESGYRSFRALCPRWALVGGDIYGNSPAMEALGDVRQLQHEQLRKAQAIDYKSNPPLQLPVSAKNQD-- 315 (555) T ss_pred EEeccCCccccccCCcccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeecccccccc-- Confidence 00011222322223 47999999999999999999999888888777777766554332211 Q ss_pred HHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHH-HHHHHHHHHHHHHHhcCCHHH-hcc-cccchhHHH--H Q lcl|Aclame:pro 216 RQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQL-ITSNNFSTAQIAKALRVPSYK-LGV-NSPNQSVAQ--L 290 (406) Q Consensus 216 ~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~-~e~~~~~~~~Ia~~fgvpp~~-lg~-~~~~~n~~~--~ 290 (406) + +..-|... .+..-..+-.+.++-.+..+++. .+..+..+..|-.+|-.+-.. ++. ....-+.+| . T Consensus 316 -------~-~~~pgg~~-~v~~g~~~d~~~~~~~~~~d~~~~~~~i~~~~~rI~~af~~dlf~~l~~~~~~~~TAtEV~~ 386 (555) T protein:vir:98 316 -------I-STVPGGLS-YVDAAAPNGGIRTAFEVNLDLSHLLADIVDVRERIKASFYADLFLMLANGTNPQMTATEVAE 386 (555) T ss_pred -------c-eecccccc-ccccCCCCcceecccccccchHHHHHHHHHHHHHHHHHhhcchhhhccCCCCCcccHHHHHH Confidence 1 11111110 01011112233333222223443 345677778899999766322 221 111112222 1 Q ss_pred HH------------HHHHHHHHHHHHHHHHHHHhh-ccCccch----hhhhhhhcccchhHH-H---HHH-------HHH Q lcl|Aclame:pro 291 ME------------DYVTNDLPFYFDAITSELGLK-TLNDKDR----RLYHIEFDTRSVTGR-N---VDE-------IVK 342 (406) Q Consensus 291 ~~------------~~~~~~i~P~~~~ie~~l~~~-l~~~~~~----~~~~~~~~~~~~~~~-~---~~~-------~~~ 342 (406) +. .+....+.|++...=..+.+. ++++... ..+.+++. ..+-+. + ... +.. T Consensus 387 r~~E~~~~LG~v~~rl~~E~l~Pli~r~~~il~r~g~lP~~P~~l~~~~i~v~yi-s~La~aq~~~~~~~i~~~l~~i~~ 465 (555) T protein:vir:98 387 RHEEKLLMLGPVLERMHNEILDPLIELTFQRMVEANILPPPPQEMQGVDLNVEFV-SMLAQAQRAIATNSVDRFVGNLGA 465 (555) T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhcCceeEEEec-cHHHHHHHHHHHHHHHHHHHHHHH Confidence 12 233444555554444444332 3333211 11222221 111111 1 111 111 Q ss_pred HHhCC-----CcCHH----HHHHHhCCCCCCCCCCCeeeeccCcc-chhhc-cc-cc-----------cccCcccCCCcc Q lcl|Aclame:pro 343 LVNNQ-----ILTPN----QGLVELGKQKSTDPNMDRYQSSLNYV-FLDKK-EE-YQ-----------DKVGIKGKGGEV 399 (406) Q Consensus 343 ~~~~g-----~~t~N----E~R~~~g~~p~~~~~gd~~~~~~n~~-~~~~~-~~-~~-----------~~~~~~~~gg~~ 399 (406) +.+.+ .+..+ .+.+.+|.|+- ++.+..-+ -+-.. .+ .+ ........+.+. T Consensus 466 laq~~P~vld~id~d~~~~~~a~~~Gvp~~-------~irs~eev~~~r~qr~~~~q~~~~a~~~~q~~~~~~~~~~~~~ 538 (555) T protein:vir:98 466 VAGIKPEVLDKFDADRWADTYADMLGIDPE-------LIVPGNQVALIRKQRADQQQAAQQAALLNQGADTAAKLGSVDT 538 (555) T ss_pred HhcCChhhhhcCCHHHHHHHHHHHhCCCcc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc Confidence 11111 12222 23333455431 11111000 00000 00 00 000111122333 Q ss_pred CCCCCCC Q lcl|Aclame:pro 400 NAEEDKS 406 (406) Q Consensus 400 ~~~~~~~ 406 (406) +..+..+ T Consensus 539 ~~~~~~~ 545 (555) T protein:vir:98 539 SKQNALT 545 (555) T ss_pred CcchhHH Confidence 2222222 No 255 >protein:vir:107822 Length: 555 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:481 # MgeID: mge:1673 # MgeName: BIP-1 # Cross-refs: genbank:acc:NP_996631;genbank:gi:45580765;genbank:GeneID:2767898 Probab=42.71 E-value=0.87 Score=20.90 Aligned_cols=384 Identities=10% Similarity=0.022 Sum_probs=151.8 Q ss_pred Ccc----------cccccCCCCcchhhHHHh---hcCC--------cccccchhhhhccHHHHHHHHHHHHhhcc----- Q lcl|Aclame:pro 1 MSF----------FQPLGTSKVSYDDYISSV---LAGD--------VSQKYLGVSALKNSDILTATSIIAGDIAR----- 54 (406) Q Consensus 1 M~~----------f~~~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~----- 54 (406) |-= |+.+++.+.++...+.+. .-.. ....-....-.-.++...|++.+|..+.+ T Consensus 1 M~~~~~~~~l~~r~~~l~~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~~~~~~~dst~~~a~~~LAa~L~~~ltpp 80 (555) T protein:vir:10 1 MAEQTERKLLLSRWGQLRTERESWMSHWKEISDYLLPRAGRFFVQDRNRGEKRHNNILDNTGTRALRVLAAGMMAGMTSP 80 (555) T ss_pred CCCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCcccccccCCCCCcchhcccccccccHHHHHHHHHHHHHHhhcCC Confidence 431 223334444444333222 1111 10000101112244455666666666533 Q ss_pred -ceeEEEec-CCcccccchHHH-------HhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCe Q lcl|Aclame:pro 55 -FPLVKKDV-NGDIIHDEDINY-------LLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPS 125 (406) Q Consensus 55 -~~~~~~~~-~~~~~~~~~~~~-------lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~ 125 (406) -||.-... +.+......+.. .+. .--..-+.+.-+..+..++.++||+.+|+..+.. ....+.+++.. T Consensus 81 ~~~WF~l~~~d~~l~e~~~v~~~L~~ve~~~~-~~l~~snf~~~~~~~~~~Lv~~G~a~l~~~~d~~--~~~rf~~~pl~ 157 (555) T protein:vir:10 81 ARPWFRLTTSIPELDESAAVKAWLANVTRLML-MIFAKSNTYRALHSMYEELGAFGTASSIVLPDFD--AVVYHHSLTAG 157 (555) T ss_pred CCcccccccCcccccchHHHHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHHHHhhCceEEEEecCCC--ceEEEEEeecc Confidence 24533332 211111111111 111 1111233455566778899999999999887654 34455555666 Q ss_pred eEEEEEccCcceEEEEEe--------------------------ecC-CeEEE-----E--------------------- Q lcl|Aclame:pro 126 ETTVEETDNHEIVYTFTD--------------------------MLT-AKQVK-----C--------------------- 152 (406) Q Consensus 126 ~~~~~~~~~g~~~~~~~~--------------------------~~~-g~~~~-----~--------------------- 152 (406) .+.+..+..|++.-.+.. ... ...++ + T Consensus 158 ~~~v~~d~~G~vd~i~r~~~~t~~ql~~~fg~~~l~~~~~~~~~~~~~~~~v~v~~~V~pr~~~~~~~~~~~~~p~~s~~ 237 (555) T protein:vir:10 158 EYAIAADNQGRVNTLYREFQITVAQMVREFGKDKCSTTVQSLFDRGALEQWVTVIHAIEPRADRDPSKRDDRNMAWKSVY 237 (555) T ss_pred eeEEeeCCCCCEEEEEEEEeccHHHHHHhcCcccCCHHHHHHHhcCCCCceEEEEEEEeeccCcCcCCCCccccceEEEE Confidence 666666666654222110 000 00000 0 Q ss_pred ----------------cceeeEeeccCCCC-CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHH Q lcl|Aclame:pro 153 ----------------FAHDVIHWKFFSHD-TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDA 215 (406) Q Consensus 153 ----------------~~~~vih~r~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~ 215 (406) ..-..+.+|+...+ ..||.||.+-+...+...+.+.+.......-...|...+.......+ T Consensus 238 ~~~~~d~~~vl~esgy~e~P~i~~Rw~~~~ge~YGrgp~~~~lgD~k~L~~l~~~~l~~~~~~~~pp~~v~~~~~~~~-- 315 (555) T protein:vir:10 238 FEPGADETRTLRESGYRSFRALCPRWALVGGDIYGNSPAMEALGDVRQLQHEQLRKAQAIDYKSNPPLQLPVSAKNQD-- 315 (555) T ss_pred EEeccCCccccccCCcccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeecccccccc-- Confidence 00011222322223 47999999999999999999999888888777777766554332211 Q ss_pred HHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHH-HHHHHHHHHHHHHHhcCCHHH-hcc-cccchhHHH--H Q lcl|Aclame:pro 216 RQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQL-ITSNNFSTAQIAKALRVPSYK-LGV-NSPNQSVAQ--L 290 (406) Q Consensus 216 ~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~-~e~~~~~~~~Ia~~fgvpp~~-lg~-~~~~~n~~~--~ 290 (406) + +..-|... .+..-..+-.+.++-.+..+++. .+..+..+..|-.+|-.+-.. ++. ....-+.+| . T Consensus 316 -------~-~~~pgg~~-~v~~g~~~d~~~~~~~~~~d~~~~~~~i~~~~~rI~~af~~dlf~~l~~~~~~~~TAtEV~~ 386 (555) T protein:vir:10 316 -------I-STVPGGLS-YVDAAAPNGGIRTAFEVNLDLSHLLADIVDVRERIKASFYADLFLMLANGTNPQMTATEVAE 386 (555) T ss_pred -------c-eecccccc-ccccCCCCcceecccccccchHHHHHHHHHHHHHHHHHhhcchhhhccCCCCCcccHHHHHH Confidence 1 11111110 01011112233333222223443 345677778899999766322 221 111112222 1 Q ss_pred HH------------HHHHHHHHHHHHHHHHHHHhh-ccCccch----hhhhhhhcccchhHH-H---HHH-------HHH Q lcl|Aclame:pro 291 ME------------DYVTNDLPFYFDAITSELGLK-TLNDKDR----RLYHIEFDTRSVTGR-N---VDE-------IVK 342 (406) Q Consensus 291 ~~------------~~~~~~i~P~~~~ie~~l~~~-l~~~~~~----~~~~~~~~~~~~~~~-~---~~~-------~~~ 342 (406) +. .+....+.|++...=..+.+. ++++... ..+.+++. ..+-+. + ... +.. T Consensus 387 r~~E~~~~LG~v~~rl~~E~l~Pli~r~~~il~r~g~lP~~P~~l~~~~i~v~yi-s~La~aq~~~~~~~i~~~l~~i~~ 465 (555) T protein:vir:10 387 RHEEKLLMLGPVLERMHNEILDPLIELTFQRMVEANILPPPPQEMQGVDLNVEFV-SMLAQAQRAIATNSVDRFVGNLGA 465 (555) T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhcCceeEEEec-cHHHHHHHHHHHHHHHHHHHHHHH Confidence 12 233444555554444444332 3333211 11222221 111111 1 111 111 Q ss_pred HHhCC-----CcCHH----HHHHHhCCCCCCCCCCCeeeeccCcc-chhhc-cc-cc-----------cccCcccCCCcc Q lcl|Aclame:pro 343 LVNNQ-----ILTPN----QGLVELGKQKSTDPNMDRYQSSLNYV-FLDKK-EE-YQ-----------DKVGIKGKGGEV 399 (406) Q Consensus 343 ~~~~g-----~~t~N----E~R~~~g~~p~~~~~gd~~~~~~n~~-~~~~~-~~-~~-----------~~~~~~~~gg~~ 399 (406) +.+.+ .+..+ .+.+.+|.|+- ++.+..-+ -+-.. .+ .+ ........+.+. T Consensus 466 laq~~P~vld~id~d~~~~~~a~~~Gvp~~-------~irs~eev~~~r~qr~~~~q~~~~a~~~~q~~~~~~~~~~~~~ 538 (555) T protein:vir:10 466 VAGIKPEVLDKFDADRWADTYADMLGIDPE-------LIVPGNQVALIRKQRADQQQAAQQAALLNQGADTAAKLGSVDT 538 (555) T ss_pred HhcCChhhhhcCCHHHHHHHHHHHhCCCcc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc Confidence 11111 12222 23333455431 11111000 00000 00 00 000111122333 Q ss_pred CCCCCCC Q lcl|Aclame:pro 400 NAEEDKS 406 (406) Q Consensus 400 ~~~~~~~ 406 (406) +..+..+ T Consensus 539 ~~~~~~~ 545 (555) T protein:vir:10 539 SKQNALT 545 (555) T ss_pred CcchhHH Confidence 2222222 No 256 >protein:vir:102239 Length: 527 # NCBI annotation: gp9 # Family: family:all:6920 # MgeID: mge:1648 # MgeName: PBI1 # Cross-refs: genbank:acc:YP_655205;genbank:gi:109522785;genbank:GeneID:4157478 Probab=41.87 E-value=0.91 Score=20.81 Aligned_cols=384 Identities=11% Similarity=0.064 Sum_probs=164.9 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcc--cccchhhhhccHHHHHHHHHHHHhhccc----------------------- Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVS--QKYLGVSALKNSDILTATSIIAGDIARF----------------------- 55 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~~v~~~i~~ia~~ia~~----------------------- 55 (406) |+.=++.-..+.++ .+|..+ ..|++..--+..+..--.++-.+..+++ T Consensus 1 ~~~~~~~~~~~~~~-------~~g~~~~p~~v~~~d~~Rl~aY~l~~~~y~n~~~~~~~~lrg~~~~~~r~~~~ps~~~~ 73 (527) T protein:vir:10 1 MGQDKRQYGSTQQL-------RAGEANFPNAVTDFDKARLASYRLYEDMYLTNTSDYQVILRGGDEGDQRPIYVPNGEKL 73 (527) T ss_pred CCccccccCCCcCc-------CCccccCcccCCHHHHHHHHHHHHHHHHhcCchhheeeecCCccccccceeeehhhHHh Confidence 76543322111111 011111 0011111100100000001111110110 Q ss_pred -----eeEEEecCCc-ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC--CceeEEEeecCCeeE Q lcl|Aclame:pro 56 -----PLVKKDVNGD-IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK--TNQALQFQFYRPSET 127 (406) Q Consensus 56 -----~~~~~~~~~~-~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~--~g~~~~l~~l~p~~~ 127 (406) .|.+...+.. ......+..+|++ --...+......+...+.++.|++...+.+|.. .|.-..+..++|..+ T Consensus 74 ~~~~~~~~~~g~~~~~~~~~e~v~~~lr~-~~~~e~l~~~~~~~~r~~~vlGDg~f~l~wD~~k~~~~R~~v~~~DP~~~ 152 (527) T protein:vir:10 74 IEAKMRFLGQGLKWEFSKKDAKVDDAIRV-LFDRENWEQKFESLKRWTEIRGDYVLLLIGDDEKDEGSRLSLHEVDPSTY 152 (527) T ss_pred hCCcceeeccCccccccchhHHHHHHHHH-HHHHhhhHHHHHHHHHhhhhhcceeEEEeeccCCCcCCCceEeecCccee Confidence 1111110000 0011223334432 112234445566667777889999999998752 233456777777776 Q ss_pred EEEEccCcc--e--EEEE--E-ee--------------------c------CCeE-EE---------------------- Q lcl|Aclame:pro 128 TVEETDNHE--I--VYTF--T-DM--------------------L------TAKQ-VK---------------------- 151 (406) Q Consensus 128 ~~~~~~~g~--~--~~~~--~-~~--------------------~------~g~~-~~---------------------- 151 (406) .+..+.++. + +|.. + .+ . .|.. ++ T Consensus 153 f~~ed~d~~~~v~~v~~~~~~~~P~d~~~~~~~ar~~~~~~~l~~~g~~~~~G~~~yt~~~w~lg~w~d~~e~p~~~~~~ 232 (527) T protein:vir:10 153 FPYEDPRYPGQVLGVYLVDEYPHPDSEKKNEKCARVQKYMKTLDDDGKPVPGGAIKYTEELYEPGKWDDRPESPLEPDDI 232 (527) T ss_pred eeeecCCCCCceeeEEEeeeccCCccccccceehhhhhhhhhcCcccccccCcceeeeeceeeccccccccccccchhhh Confidence 666554431 1 1100 0 00 0 0000 00 Q ss_pred ---------------EcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHH Q lcl|Aclame:pro 152 ---------------CFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDA 215 (406) Q Consensus 152 ---------------~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~ 215 (406) +.-=.|+||+.. ..+...|.|-+.-+...++..+....-.....+-++.|-.++..-... + T Consensus 233 ~~~~~~~~l~~lp~pi~fiPvV~~~t~p~~~~~WG~S~La~ll~l~deLn~~~Td~s~is~~sG~Pi~~~tg~~~v---d 309 (527) T protein:vir:10 233 KKLSTLTEEEPLPEQITTLPVFHFRGHPIMNAMFGRSGLAGLESLIASVNQTMTDEDLIMVFGGLGFYATDSAPPR---D 309 (527) T ss_pred hhhcCceeeecccCCCCccceEeecCCCccccccChhhHhHHHHHHHHHhhhhhHHHHHHHHhCCceeeecccccc---c Confidence 000126677653 345678999888666666655544444444445566665444322211 0 Q ss_pred HHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHH Q lcl|Aclame:pro 216 RQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYV 295 (406) Q Consensus 216 ~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~ 295 (406) . +-......-| -|.++=|+++.++..++..+.-..+....+...+.|+..=++|..-+|......+..... + T Consensus 310 ~---~G~~~~~~Vg--PG~iweL~e~ak~~~v~~~~~la~~~~h~~~L~~~l~~vA~~PavA~G~vD~s~~~SG~A---L 381 (527) T protein:vir:10 310 S---RGNMVPWTIS--PLGMVEHGQNNKIYRVNGVASLEPSQTHMNKAEEAMQQTKGIPDIAVGVVDAAVAESGIA---L 381 (527) T ss_pred c---cCCcCccccC--CceeEecCCCcceeeccchhhhHHHHHHHHHHHHHHHHhhcCCeeeeccccCCcCcHHHH---H Confidence 0 0000001111 123455888999999888766666677788888899999999999999322111111111 1 Q ss_pred HHHHHHHHHHHHHH-------H--------Hhhc-----cCccc-h--hhhhhhh--cccchhHHHHHHHHHHHhCCCcC Q lcl|Aclame:pro 296 TNDLPFYFDAITSE-------L--------GLKT-----LNDKD-R--RLYHIEF--DTRSVTGRNVDEIVKLVNNQILT 350 (406) Q Consensus 296 ~~~i~P~~~~ie~~-------l--------~~~l-----~~~~~-~--~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t 350 (406) .-.+.|++...+.. + .+.| +...+ . ....+.| .+..+.++.++....++++|+++ T Consensus 382 eL~L~PLlar~~rk~L~~~~Vqrq~~~~~~~~~L~aye~v~~~d~~~~~~v~ivf~p~lP~D~~avie~v~tL~~aGiiS 461 (527) T protein:vir:10 382 DLKLSAILSSCAEQELELKSVLKQFFYNLVTQWLPAYEGVGIDDADKKLTVTITFRDPKPVNNEKRFAQLLELWEAGLIP 461 (527) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhcccCCCccccceEEEecccCCCCHHHHHHHHHHHHHcCchh Confidence 11222222211111 0 0100 11111 0 0112222 34557788899999999999999 Q ss_pred HHHHHHHh----CCCCCCCCCCC--eeeeccCccchhhcccccc-ccCcccCCCccCCCCCCC Q lcl|Aclame:pro 351 PNQGLVEL----GKQKSTDPNMD--RYQSSLNYVFLDKKEEYQD-KVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 351 ~NE~R~~~----g~~p~~~~~gd--~~~~~~n~~~~~~~~~~~~-~~~~~~~gg~~~~~~~~~ 406 (406) .-=+-++| |++. +..+ +...-.-....+.++.... ..+.-..+|=++++.|+- T Consensus 462 ~etAv~~L~~~~g~eD---~E~E~~~I~~era~~a~a~a~a~~~~~a~~~~~~g~~~~~~d~~ 521 (527) T protein:vir:10 462 AKKLTEELSKIMGFEL---TEEDFRQATEDKKTQGIAQAEAADPFGAQMAAEQGIPDEEDDQA 521 (527) T ss_pred HHHHHHHHHhccCCCc---hHHHHHHHHHHHHHHhHHhhhhcCchhhhhccccCCCCCCcccc Confidence 98887777 4222 2222 1111111111111111111 111122334334444443 No 257 >protein:vir:101494 Length: 527 # NCBI annotation: gp9 # Family: family:all:6920 # MgeID: mge:1627 # MgeName: PLot # Cross-refs: genbank:acc:YP_655388;genbank:gi:109522576;genbank:GeneID:4157566 Probab=41.47 E-value=0.93 Score=20.77 Aligned_cols=384 Identities=11% Similarity=0.065 Sum_probs=164.9 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcc--cccchhhhhccHHHHHHHHHHHHhhccc----------------------- Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVS--QKYLGVSALKNSDILTATSIIAGDIARF----------------------- 55 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~~~v~~~i~~ia~~ia~~----------------------- 55 (406) |+.=++.-..+.++ .+|..+ ..|++..--+..+..--.++-.+..+++ T Consensus 1 ~~~~~~~~~~~~~~-------~~g~~~~p~~v~~~d~~Rl~aY~l~~~~y~n~~~~~~~~lrg~~~~~~r~~~~ps~~~~ 73 (527) T protein:vir:10 1 MGQDKRQYGSTQQL-------RAGEANFPNAVTDFDKARLASYRLYEDMYLTNTSDYQVILRGGDEGDQRPIYVPNGEKL 73 (527) T ss_pred CCccccccCCCcCc-------CCccccCcccCCHHHHHHHHHHHHHHHHhcCchhheeeecCCccccccceeeehhhHHh Confidence 76543322111111 011111 0011111100100000001111110110 Q ss_pred -----eeEEEecCCc-ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC--CceeEEEeecCCeeE Q lcl|Aclame:pro 56 -----PLVKKDVNGD-IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK--TNQALQFQFYRPSET 127 (406) Q Consensus 56 -----~~~~~~~~~~-~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~--~g~~~~l~~l~p~~~ 127 (406) .|.+...+.. ......+..+|++ --...+......+...+.++.|++...+.+|.. .|.-..+..++|..+ T Consensus 74 ~~~~~~~~~~g~~~~~~~~~e~v~~~lr~-~~~~e~l~~~~~~~~r~~~vlGDg~f~l~wD~~k~~~~R~~v~~~DP~~~ 152 (527) T protein:vir:10 74 IEAKMRFLGQGLKWEFSKKDAKVDDAIKV-LFDRENWEQKFESLKRWTEIRGDYVLLLIGDDEKDEGSRLSLHEVDPSTY 152 (527) T ss_pred hCCcceeeccCccccccchhHHHHHHHHH-HHHHhhhHHHHHHHHHhhhhhcceeEEEeeccCCCcCCCceEeecCccee Confidence 1111110000 0011223334432 112234445566667777889999999998752 233456777777776 Q ss_pred EEEEccCcc--e--EEEE--E-ee--------------------c------CCeE-EE---------------------- Q lcl|Aclame:pro 128 TVEETDNHE--I--VYTF--T-DM--------------------L------TAKQ-VK---------------------- 151 (406) Q Consensus 128 ~~~~~~~g~--~--~~~~--~-~~--------------------~------~g~~-~~---------------------- 151 (406) .+..+.++. + +|.. + .+ . .|.. ++ T Consensus 153 f~~ed~d~~~~v~~v~~~~~~~~P~d~~~~~~~ar~~~~~~~l~~~g~~~~~G~~~yt~~~w~lg~w~d~~e~p~~~~~~ 232 (527) T protein:vir:10 153 FPYEDPRYPGQVLGVYLVDEYPHPDSEKKNEKCARVQKYMKTLDDDGKPVPGGAIKYTEELYEPGKWDDRPESPLEPDDI 232 (527) T ss_pred eeeecCCCCCceeeEEEeeeccCCccccccceehhhhhhhhhcCcccccccCcceeeeeceeeccccccccccccchhhh Confidence 666554431 1 1100 0 00 0 0000 00 Q ss_pred ---------------EcceeeEeeccC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHH Q lcl|Aclame:pro 152 ---------------CFAHDVIHWKFF-SHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDA 215 (406) Q Consensus 152 ---------------~~~~~vih~r~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~ 215 (406) +.-=.|+||+.. ..+...|.|-+.-+...++..+....-.....+-++.|-.++..-... + T Consensus 233 ~~~~~~~~l~~lp~pi~fiPvV~~~t~p~~~~~WG~S~La~ll~l~deLn~~~Td~s~is~~sG~Pi~~~tg~~~v---d 309 (527) T protein:vir:10 233 KKLSTLTEEEPLPEQITTLPVFHFRGHPIMNAMFGRSGLAGLESLIASVNQTMTDEDLIMVFGGLGFYATDSAPPR---D 309 (527) T ss_pred hhhcCceeeecccCCCCccceEeecCCCccccccChhhHhHHHHHHHHHhhhhhHHHHHHHHhCCceeeecccccc---c Confidence 000126677653 345678999888666666655544444444445566665444322211 0 Q ss_pred HHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccchhHHHHHHHHH Q lcl|Aclame:pro 216 RQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYV 295 (406) Q Consensus 216 ~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~~~~~~~ 295 (406) . +-......-| -|.++=|+++.++..++..+.-..+........+.|+..=++|..-+|......+..... + T Consensus 310 ~---~G~~~~~~Vg--PG~iweL~e~ak~~~v~~~~~la~~~~h~~~L~~~l~~vA~~PavA~G~vD~s~~~SG~A---L 381 (527) T protein:vir:10 310 S---RGNMVPWTIS--PLGMVEHGQNNKIYRVNGVASLEPSQTHMTKAEEAMQQTKGIPDIAVGVVDAAVAESGIA---L 381 (527) T ss_pred c---cCCcCccccC--CceeEecCCCcceeeccchhhhHHHHHHHHHHHHHHHHhhcCCeeeeccccCCcCcHHHH---H Confidence 0 0000001111 123455888999999888766566677788888899999999999999322111111111 1 Q ss_pred HHHHHHHHHHHHHH-------H--------Hhhc-----cCccc-h--hhhhhhh--cccchhHHHHHHHHHHHhCCCcC Q lcl|Aclame:pro 296 TNDLPFYFDAITSE-------L--------GLKT-----LNDKD-R--RLYHIEF--DTRSVTGRNVDEIVKLVNNQILT 350 (406) Q Consensus 296 ~~~i~P~~~~ie~~-------l--------~~~l-----~~~~~-~--~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~t 350 (406) .-.+.|++...+.. + .+.| +...+ . ....+.| .+..+.++.++....++++|+++ T Consensus 382 eL~L~PLlar~~rk~L~~~~vqrq~~~~~~~~~L~aye~v~~~d~~~~~~v~ivf~p~lP~D~~avie~v~tL~~aGi~S 461 (527) T protein:vir:10 382 DLKLSAILSSCAEQELELKSVLKQFFYNLVTQWLPAYEGVGIDDADKKLTVTITFRDPKPVNSEKRFNQLLQLWEAGLIP 461 (527) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhcccCCCccccceEEEecccCCCCHHHHHHHHHHHHHcCchh Confidence 11222222211111 1 0100 11111 0 0112222 34557788899999999999999 Q ss_pred HHHHHHHh----CCCCCCCCCCC--eeeeccCccchhhcccccc-ccCcccCCCccCCCCCCC Q lcl|Aclame:pro 351 PNQGLVEL----GKQKSTDPNMD--RYQSSLNYVFLDKKEEYQD-KVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 351 ~NE~R~~~----g~~p~~~~~gd--~~~~~~n~~~~~~~~~~~~-~~~~~~~gg~~~~~~~~~ 406 (406) .-=+-++| |++. +..+ +...-.-....+.++.... ..+.-..+|=++++.|+- T Consensus 462 ~~tAv~~L~~~~g~eD---~E~E~~~I~~era~~a~a~a~A~~~~~a~~~~~~g~~~~~~d~~ 521 (527) T protein:vir:10 462 AKKLTEELSKIMGFEL---TEEDFKQATEDKKTQGIAQAEAADPFGAQMAAEQGIPDEEDDQA 521 (527) T ss_pred HHHHHHHHHhccCCCC---hHHHHHHHHHHHHHHhHHhhhhcCchhhhhccccCCCCCCcccc Confidence 98887777 4222 2222 1111111111111111111 111122334334444443 No 258 >protein:vir:100039 Length: 522 # NCBI annotation: T7-like head-to-tail connector # Family: family:all:481 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214201;genbank:gi:61806424;genbank:GeneID:3294719 Probab=41.32 E-value=0.93 Score=20.75 Aligned_cols=374 Identities=11% Similarity=0.078 Sum_probs=145.3 Q ss_pred Ccc---cccccCCCCcchhhHHHh---hcCCccc-------ccchhhhhccHHHHHHHHHHHHhhcc------ceeEEEe Q lcl|Aclame:pro 1 MSF---FQPLGTSKVSYDDYISSV---LAGDVSQ-------KYLGVSALKNSDILTATSIIAGDIAR------FPLVKKD 61 (406) Q Consensus 1 M~~---f~~~~~~~~~~~~~~~~~---~~~~~~~-------~~~~~~a~~~~~v~~~i~~ia~~ia~------~~~~~~~ 61 (406) |.. |..+++.+.++...+.+. +-.+... .-....-.-.++.-.|++.+|..+.+ -||.-.+ T Consensus 1 m~~~~r~~~L~~~R~~~e~~w~e~~~~tlP~~~~~~~~~~~~~~~~~~~~dstg~~a~~~LAa~l~~~ltpp~~~WF~l~ 80 (522) T protein:vir:10 1 MKARERYNQLTTARQMFLDKAVECSELTLPYLIDDDISSRPNHKSLTVPWQSVGAKCCVTLAAKLMLAVLPPQTSFFKLQ 80 (522) T ss_pred CchHHHHHHHHHHhhHHHHHHHHHHHHhhhcccCCCCCCCcccccccccccchHHHHHHHHHHHHHHhhcCCCCcccccc Confidence 885 444555555554432222 1111000 00111112344445566666655533 2454333 Q ss_pred cCC----cc-c------ccchHHH---HhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeE Q lcl|Aclame:pro 62 VNG----DI-I------HDEDINY---LLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSET 127 (406) Q Consensus 62 ~~~----~~-~------~~~~~~~---lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~ 127 (406) ... +. . ....+.. .+. .--..-+.+.-+..++.++.++||+.+|+..+. ...+|+. .+ T Consensus 81 ~~d~~l~~~~~~~~~~~v~~~l~~ve~~~~-~~l~~snf~~~~~~~~~~L~~~G~a~ly~~~~~-----~~~~pl~--~y 152 (522) T protein:vir:10 81 VRDDKLGEELDPQIRSELDLSFSKMERMIM-DYIAASNDRVAVHQALKHLIVGGNALIFMGKDG-----LKTFPLT--RY 152 (522) T ss_pred CChHHHhhhcChhhHHHHHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHHHHhHCceeEEEcCCC-----ceEEEcc--eE Confidence 211 10 0 0111111 111 111234456667778889999999998775542 1233432 23 Q ss_pred EEEEccCcceE--------------------------------------EEEEee-cC-CeEEEE--ccee--------- Q lcl|Aclame:pro 128 TVEETDNHEIV--------------------------------------YTFTDM-LT-AKQVKC--FAHD--------- 156 (406) Q Consensus 128 ~~~~~~~g~~~--------------------------------------~~~~~~-~~-g~~~~~--~~~~--------- 156 (406) .+..+..|++. |..... .+ +....+ ..+. T Consensus 153 ~v~~d~~G~vd~i~r~~~~t~~ql~~~fg~~~~~~~~~~~~~~~~~v~v~~~v~p~~~~~~~~~~~~~~~~~~~~~~s~~ 232 (522) T protein:vir:10 153 VINRDGDGNVLEIVTKELISRKVLDIELPEPKPNTGIDESSTTNDDVTIYTYVKLDKSSGRWVWHQEAFDKIIPDSRSTA 232 (522) T ss_pred EEeeCCCCCeeEEEeeeeccHHHHHHhcchhccchhhhcccCCCCceEEEEEEEeeccCCceEEEEccCCcccccccccc Confidence 33333333321 111100 00 100000 0011 Q ss_pred ------eEeeccCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 157 ------VIHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREG 229 (406) Q Consensus 157 ------vih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g 229 (406) .+-.|+.. ....||.||.+-+...+.....+.+...........|.+++..++...+.. ...| T Consensus 233 g~~~~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~~~~~~~a~~p~~lv~~~~~~~~~~----------l~~~ 302 (522) T protein:vir:10 233 PKNASPWLPLRFNTVDGEDYGRGRVEEFLGDLKSLDGLSQSLIEGAAAASKVVFLVSPSSTTKPAT----------IAKA 302 (522) T ss_pred ccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeecccccccccc----------ccCC Confidence 12222222 234899999999999999999999999998888888887776554443221 1122 Q ss_pred cccCceeecc--CCceeeeccCChhHHHH-HHHHHHHHHHHHHHhcCCHHHhcc-cccchhHHHH--------------H Q lcl|Aclame:pro 230 SVGGSPLVFD--STMEYTPLEIDTNVLQL-ITSNNFSTAQIAKALRVPSYKLGV-NSPNQSVAQL--------------M 291 (406) Q Consensus 230 ~~~~~~~vl~--~g~~~~~l~~~~~d~~~-~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n~~~~--------------~ 291 (406) .+ +.++.+ +++...++.. ..+++. .+..+..+..|..+|-+ +.. ....-+.++- . T Consensus 303 ~~--~~~v~g~~~~v~~~~~~~-~~d~~~~~~~i~~~~~ri~~aFl~----~~~~d~~rvTAtEV~~r~~E~~~~LGpv~ 375 (522) T protein:vir:10 303 GN--GAIVQGRPEDVAVIQVGK-TADFSTAANMATAIEKRLLEAFLV----MNVRNAERVTAEEVRLTQLELEQQLGGIF 375 (522) T ss_pred CC--cceecCCCccceeecccc-cccchHHHHHHHHHHHHHHHHHhh----ccCCCCCCCCHHHHHHHHHHHHHHhhHHH Confidence 22 122222 2333333332 344443 34566777788888842 221 1111122111 1 Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-ccCccchhhh---hhhhcccchhH-HHHHH----HHHHHh-CC------CcCHHH-- Q lcl|Aclame:pro 292 EDYVTNDLPFYFDAITSELGLK-TLNDKDRRLY---HIEFDTRSVTG-RNVDE----IVKLVN-NQ------ILTPNQ-- 353 (406) Q Consensus 292 ~~~~~~~i~P~~~~ie~~l~~~-l~~~~~~~~~---~~~~~~~~~~~-~~~~~----~~~~~~-~g------~~t~NE-- 353 (406) ..+....+.|++...-..+.+. +|++...... .+.+ +..+-+ .+++. +..+.+ .| .+..++ T Consensus 376 ~rl~~E~l~Pli~r~~~il~r~g~lP~~p~~~~~~~~v~~-is~Laraq~~~~l~~~~~~i~~~~~p~~~~~~id~d~~~ 454 (522) T protein:vir:10 376 SLLVIEFLIPYLNRTLLVLQRSNQIPKLPKDIVRPTIVAG-VNALGRGQDRESLTAFVGTIAQTLGPEALMQYLNPLEAI 454 (522) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccccccccc-hhHHHHHHHHHHHHHHHHHHHHhhCchhhhhcCCHHHHH Confidence 1244555566665555555443 3433222111 1111 111111 11111 111101 01 122222 Q ss_pred --HHHHhCCCCCCCCCCCeeeeccCccchhhccccc------cccCcccCCCccCCCCCCC Q lcl|Aclame:pro 354 --GLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEYQ------DKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 354 --~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~------~~~~~~~~gg~~~~~~~~~ 406 (406) +.+.+|.|+. ..+..+....-.....+.+ .....+. +|.--.+..+| T Consensus 455 ~~~a~~~Gvp~~-----~ivrt~eev~~~~q~~q~~~~~~~~~~~a~~~-~~~~~~~~~~~ 509 (522) T protein:vir:10 455 KRLAAAQGIDVL-----NLVKTEQQLAEEQQAAQQQAAQQSLVDQAGQM-TGSPLMDPTKN 509 (522) T ss_pred HHHHHHhCCChh-----hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccCcccc Confidence 2233454421 0000000000000000000 0000000 00000001111 No 259 >protein:vir:1785 Length: 555 # NCBI annotation: head-tail connector protein # Family: family:all:481 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570351;genbank:gi:18640510;genbank:GeneID:932723 Probab=40.62 E-value=0.96 Score=20.67 Aligned_cols=376 Identities=11% Similarity=0.066 Sum_probs=150.2 Q ss_pred Ccc-----cccccCCCCcchhhHHHhh---cCCc----c--cccchhhhhccHHHHHHHHHHHHhhcc------ceeEEE Q lcl|Aclame:pro 1 MSF-----FQPLGTSKVSYDDYISSVL---AGDV----S--QKYLGVSALKNSDILTATSIIAGDIAR------FPLVKK 60 (406) Q Consensus 1 M~~-----f~~~~~~~~~~~~~~~~~~---~~~~----~--~~~~~~~a~~~~~v~~~i~~ia~~ia~------~~~~~~ 60 (406) |-- |+.+++.+.++...+.+.. -... + ......... .++.-.|++.+|..+.+ -||.-. T Consensus 1 m~~~~~~r~~~l~~~R~~~e~~w~e~~~y~lP~~~~~~~~~~~~~~~~~~-dst~~~a~~~Laa~l~~~ltpp~~~WF~l 79 (555) T protein:vir:17 1 MKHSAQAKYMMLRADREDYLDSGRQSARLTLPYILTDEGHVQGGYLPTPW-QSVGSKGVNVLASKLMLSLFPVNTSFFKL 79 (555) T ss_pred ChhHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccCCCCCcccccccccc-cccHHHHHHHHHHHHHHhhcCCCCccccc Confidence 541 3444455555554332221 1100 0 000001122 33344566666655433 245433 Q ss_pred ecCCc--------ccccchH-------HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCe Q lcl|Aclame:pro 61 DVNGD--------IIHDEDI-------NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPS 125 (406) Q Consensus 61 ~~~~~--------~~~~~~~-------~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~ 125 (406) ..... ......+ .+.+.. --..-+.+.-+..+..++..+||+.+|+..+ +...||+. T Consensus 80 ~~~d~~~~~~~~~~~~~~~v~~~l~~ve~~~~~-~l~~snf~~~~~~~~~~L~~~G~a~ly~~~~-----~~~~~pl~-- 151 (555) T protein:vir:17 80 QINDAEIDNLGMDEQARSEIDLSLSRIERIVTQ-DIAESSDRVHLEMAMKHLIVTGNALLYQGKK-----NLKLYPLD-- 151 (555) T ss_pred ccCHHHHhhccCCHHHHHHHHHHHHHHHHHHHH-HHHhcCcHHHHHHHHHHHHhHCeEEEEecCC-----ceeEEEcC-- Confidence 32210 0111111 111211 1112345566677788889999999876543 23456653 Q ss_pred eEEEEEccCcceEEEEE--------------------------------------------------------------- Q lcl|Aclame:pro 126 ETTVEETDNHEIVYTFT--------------------------------------------------------------- 142 (406) Q Consensus 126 ~~~~~~~~~g~~~~~~~--------------------------------------------------------------- 142 (406) .+.+..+..|++...+. T Consensus 152 ~y~v~~d~~G~vd~v~rk~~~t~~ql~~~fg~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~t~~~~~~~~ 231 (555) T protein:vir:17 152 RFVVSRDGEGNVMEIVTEEQIDRSLLPEEFQKVGGLEGAPDSNAVGEDGPKMGVTAPGGRDKGKSNDALVYTYVCRKDGQ 231 (555) T ss_pred eEEEeeCCCcCeeEEEeeeeecHHHHHHHhhhccccchhhhhhhccccchhhhhhhhcccccCCCcceeEeecccccCCe Confidence 34444555554321111 Q ss_pred ----eecCCeEE-------EEcceeeEeeccCCC-CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCC Q lcl|Aclame:pro 143 ----DMLTAKQV-------KCFAHDVIHWKFFSH-DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQ 210 (406) Q Consensus 143 ----~~~~g~~~-------~~~~~~vih~r~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~ 210 (406) ....+... .|..-..+..|+... ...||.||.+-+...+...+.+.+...........|.+++..+.. T Consensus 232 ~~~~~e~~~~~v~~~l~e~g~~e~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~pp~lv~~~g~ 311 (555) T protein:vir:17 232 VKWHQECDGKVIPGSNSSAPYTHNPWIPLRFNIVDGEAYGRGRVEEFMGDLKSLEALSQAMVEGSAASAKVVFMVSPSAT 311 (555) T ss_pred eEEEEecCceeccccccccCcccCCeeeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeccccc Confidence 00011000 000112234444333 348999999999999999999999999888888888877765554 Q ss_pred CCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccC-ChhHHHHH-HHHHHHHHHHHHHhcCCHHHhcccc-cchhH Q lcl|Aclame:pro 211 LSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEI-DTNVLQLI-TSNNFSTAQIAKALRVPSYKLGVNS-PNQSV 287 (406) Q Consensus 211 ~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~-~~~d~~~~-e~~~~~~~~Ia~~fgvpp~~lg~~~-~~~n~ 287 (406) ..+.+. ..|.+ +.++....-.+.++.. ++.+++.. +..+..+..|-.+|-+ ++... ..-+. T Consensus 312 ~~~~~l----------~~~~~--g~v~~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~~I~~aFm~----~~~~d~~r~TA 375 (555) T protein:vir:17 312 TKPQNL----------ALAAN--GAIIQGRPDDVSVVQANKAADFRTVLEMIQKLEQRISDAFLM----LQVRQSERTTA 375 (555) T ss_pred cCccee----------ecCCC--ceeecCCcccceeeeccccchhhHHHHHHHHHHHHHHHHHhh----cCCCCcccchH Confidence 443221 11211 2233222333444432 23455533 3445556778777754 22111 11122 Q ss_pred HHH--HH------------HHHHHHHHHHHHHHHHHHHh-hccCccchhhhhhhhccc--c-----hhHHHHHHHHHHHh Q lcl|Aclame:pro 288 AQL--ME------------DYVTNDLPFYFDAITSELGL-KTLNDKDRRLYHIEFDTR--S-----VTGRNVDEIVKLVN 345 (406) Q Consensus 288 ~~~--~~------------~~~~~~i~P~~~~ie~~l~~-~l~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~ 345 (406) +|- +. .+....+.|++...-..+.+ .+|++.......+.+.+. . +.......+..+.+ T Consensus 376 tEV~~r~~E~~~~LGpv~~rl~~E~L~Pli~R~~~il~r~g~lP~~p~~~v~~~i~~~l~~l~r~~~~~~l~~~~~~laq 455 (555) T protein:vir:17 376 TEVQATVQELNEQIGGIYSNLTTELLQPYLARKLHLLQKQRKLPQLPKDLVQPTVVAGLWGVGRGQDKQQLMEFITTLAQ 455 (555) T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHhhhccceeehHHHHHHHHHHHHHHHHHHHHHh Confidence 221 11 23344555555544444433 234433322222222221 1 11111112222222 Q ss_pred CC-------CcCHH----HHHHHhCCCCCCCCCCCeeeeccCccchhhcc------ccccccCccc----------C--- Q lcl|Aclame:pro 346 NQ-------ILTPN----QGLVELGKQKSTDPNMDRYQSSLNYVFLDKKE------EYQDKVGIKG----------K--- 395 (406) Q Consensus 346 ~g-------~~t~N----E~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~------~~~~~~~~~~----------~--- 395 (406) .+ .+..+ ++.+.+|.+|.. .+..+.-..-+-... ..+.....+. + T Consensus 456 ~~~~p~~~d~id~d~~~~~~a~~~Gv~p~~-----ivrs~eev~~~rq~~~~~~~q~~~~~qa~~~~~~~~~~~~~~~~~ 530 (555) T protein:vir:17 456 TMGPEIAMKYINPTEFIKRLAAAQGIDTLQ-----LINSPETMKQLGDQQKQDMVQASLINQAGQLAKTPMAEQAMQLIQ 530 (555) T ss_pred hcCchhHhhcCCHHHHHHHHHHHcCCChhh-----hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhccc Confidence 21 12222 333445665531 111111000000000 0000000000 0 Q ss_pred -------CCccCCCCCCC Q lcl|Aclame:pro 396 -------GGEVNAEEDKS 406 (406) Q Consensus 396 -------gg~~~~~~~~~ 406 (406) ++-..-.++.| T Consensus 531 ~~~~~a~~~~~a~~~~~~ 548 (555) T protein:vir:17 531 QQQEGAQDAGAAESETSS 548 (555) T ss_pred cchhhhhHHHHHHhhcCC Confidence 00001111222 No 260 >protein:vir:5665 Length: 511 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899604;genbank:gi:34419591;genbank:GeneID:2546036 Probab=40.19 E-value=0.98 Score=20.63 Aligned_cols=378 Identities=9% Similarity=0.064 Sum_probs=169.7 Q ss_pred Ccccccc---------cCCCCcch-----hhH--------HHhhcCC-cccccc-------h------hhhhccHHHHHH Q lcl|Aclame:pro 1 MSFFQPL---------GTSKVSYD-----DYI--------SSVLAGD-VSQKYL-------G------VSALKNSDILTA 44 (406) Q Consensus 1 M~~f~~~---------~~~~~~~~-----~~~--------~~~~~~~-~~~~~~-------~------~~a~~~~~v~~~ 44 (406) |.||.+. +.+..|+. +.. .....|. .+.++. . ++.+.+|.|..| T Consensus 1 ~~~w~~~de~~~~~~~~~~~~S~~~p~~~DGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~pEvd~A 80 (511) T protein:vir:56 1 MKFWTKEEEQDIQKIEKNPVRSFSAPDNVDGAKEIHTNLLAPQLGHAIIPSDAQSEGTIPVKELIKSYRALAEYHEVDDA 80 (511) T ss_pred CCCccchhhhhhhhhccCCcccccCCCCCCCceEEecccccceecceeccccccccCccchHHHHHHHHHHhhccchhhH Confidence 8888542 11111111 110 0001111 111111 1 124678999999 Q ss_pred HHHHHHhhccc-----eeEEEecCCc------ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCC Q lcl|Aclame:pro 45 TSIIAGDIARF-----PLVKKDVNGD------IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKT 113 (406) Q Consensus 45 i~~ia~~ia~~-----~~~~~~~~~~------~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~ 113 (406) |+.|.+.+.-+ |+.+.=.+.+ ........++|+. -+-...+ ..++..|.+.|..|..++.+.+. T Consensus 81 v~eIvne~iv~d~~~~pV~l~ld~~~~s~~iK~kI~eeF~~Il~l-l~F~~~~----~~~fR~WYVDgRi~fHkiid~k~ 155 (511) T protein:vir:56 81 IQEIVDEAIVYENDKEVVWLNLDNTDFSENIKAKINEEFDRVVSL-LQMRKHG----YKWFRKWYVDSRIYFHKILDKDN 155 (511) T ss_pred HHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceEEEEEEecccc Confidence 99999887654 3333211111 0111233344431 2223333 44566778899999988888665 Q ss_pred ceeEEEeecCCeeEEEEEccC-----------cceEEEEEeecC-------------CeEEEEcceeeEeec--cC--CC Q lcl|Aclame:pro 114 NQALQFQFYRPSETTVEETDN-----------HEIVYTFTDMLT-------------AKQVKCFAHDVIHWK--FF--SH 165 (406) Q Consensus 114 g~~~~l~~l~p~~~~~~~~~~-----------g~~~~~~~~~~~-------------g~~~~~~~~~vih~r--~~--~~ 165 (406) -+.+|..|+|..++.++.-. +-..|+++.+.+ ....+++.+.|.|.. .. +. T Consensus 156 -GI~eLr~lDPr~i~~vr~i~~~~~~~~~v~~~~~ey~~Y~~~~~~~~~~~~~~~~~~~~vkI~~daI~y~hSGL~d~~~ 234 (511) T protein:vir:56 156 -NIIELRPLNPMKMELVREIQKETIDGVEVVKGTLEYYVYKQSDYKMPSWMSATNRAQTSFRIPKDAIVFAHSGLMRGCA 234 (511) T ss_pred -ceeehhhcCcccchhhhhhhcccccccccccceeeeeEecCCCcccCcccccccccccceeechhheeeecccceeccC Confidence 58889999999887643211 111222221111 134678888886654 22 34 Q ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHh---------ccc--c-c Q lcl|Aclame:pro 166 DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMR---------EGS--V-G 232 (406) Q Consensus 166 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~---------~g~--~-~ 232 (406) +.-+.+|-+..|...+....-+.....-+-=..++-.-++ .-.+.+-+...++....+-..+ +|. + . T Consensus 235 ~~g~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~kNklVYDa~TGev~ddr 314 (511) T protein:vir:56 235 DDPYIIGYLDRAIKPANQLKMLEDALVIYRLARAPERRVFYVDVGNLPTQKAQQYVNGIMQNVKNRVVYDTQTGQVKNTT 314 (511) T ss_pred CCCeeeccchhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCceeccch Confidence 5556788888888888877777666555433334333333 3334444333333333332222 221 1 1 Q ss_pred Cceeec----------cCCceeeeccC--ChhHHHHHHHHHHHHHHHHHHhcCCHHHhccccc------chhHHH-HHHH Q lcl|Aclame:pro 233 GSPLVF----------DSTMEYTPLEI--DTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSP------NQSVAQ-LMED 293 (406) Q Consensus 233 ~~~~vl----------~~g~~~~~l~~--~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~------~~n~~~-~~~~ 293 (406) .....+ ..|.+++.|.- +.-+| +-.++..+.+..+++||.+-|+..+. +...|= ..+. T Consensus 315 k~msMlEDyWLpRReGgrgTEItTLpGgqnlgem---~DV~YF~kKLy~aLnVP~SRl~~e~q~~~f~~Gr~~EItRDEi 391 (511) T protein:vir:56 315 NAMSMLEDYYLPRREGSKGTEVSTLPGGQSLGDI---EDVLYFNRKLYKAMRIPTSRAASEDQTGGINFGQGAEITRDEL 391 (511) T ss_pred hhhhhHhhhcccccCCCCccceeeccccCCcChH---HHHHHHHHHHHHHhCCCcccccCCCCccccccccchhhhHHHH Confidence 111122 24677777653 33344 44556778899999999999974321 111111 1112 Q ss_pred HHHHHHHHHHHHH----HHHHHhhccC-----ccchh----hhhhhhcccc---------hhHHHHHHHHHHHh--CCCc Q lcl|Aclame:pro 294 YVTNDLPFYFDAI----TSELGLKTLN-----DKDRR----LYHIEFDTRS---------VTGRNVDEIVKLVN--NQIL 349 (406) Q Consensus 294 ~~~~~i~P~~~~i----e~~l~~~l~~-----~~~~~----~~~~~~~~~~---------~~~~~~~~~~~~~~--~g~~ 349 (406) =++..|.-+-..+ .+-|...|+. ..++. .+.++|..+. .+..|+..+..+-. +-.+ T Consensus 392 KF~KFI~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~ 471 (511) T protein:vir:56 392 KFTKFVKRLQTKFETVITDPLKHQLIVNNIITEEEWDANHEKLYVVFNQDSYFEEAKELEILNSRMNAMRDIQDYAGKYY 471 (511) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhcchhcccc Confidence 2233344444444 4444444432 23332 2233332221 12334443332211 2244 Q ss_pred CHHHHHHH-hCCCCCCCCCCCeeeeccCccchhhccccccccCcccCCCcc-CCCCCC Q lcl|Aclame:pro 350 TPNQGLVE-LGKQKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGEV-NAEEDK 405 (406) Q Consensus 350 t~NE~R~~-~g~~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~~-~~~~~~ 405 (406) +.+=+|+. |.+.-.+ +.. .+..-....+.+.- +.++|= T Consensus 472 S~~yi~k~ILr~tDee---------------i~~---~~k~I~~E~k~~~~~~~e~~f 511 (511) T protein:vir:56 472 SHKYIQKNILRLSDDQ---------------ITA---MQSEIDEEETNPRFQQDDQGF 511 (511) T ss_pred chHHHHHHHhccCHHH---------------HHH---HHHHHHHhhcCCCCCCcccCC Confidence 55555543 3322100 000 00000000000000 000000 No 261 >protein:vir:103177 Length: 533 # NCBI annotation: gp131 # Family: family:all:1036 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717798;genbank:gi:113200635;genbank:GeneID:4239186 Probab=37.18 E-value=1.1 Score=20.29 Aligned_cols=386 Identities=12% Similarity=0.096 Sum_probs=161.0 Q ss_pred Cc-cc-----ccccC-CCCcc-----hhhHHHhhcC-Ccccccch--------------hhhhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MS-FF-----QPLGT-SKVSY-----DDYISSVLAG-DVSQKYLG--------------VSALKNSDILTATSIIAGDIA 53 (406) Q Consensus 1 M~-~f-----~~~~~-~~~~~-----~~~~~~~~~~-~~~~~~~~--------------~~a~~~~~v~~~i~~ia~~ia 53 (406) |+ +| +...+ +..++ .+......++ ..+.++.- ++.+.+|.|.+||+-|.+.+. T Consensus 1 m~~lfg~~i~~~~~~~~~~s~~~~~~~dg~~~i~~~~~~~~~~~~e~~~~~~~eLI~~YR~ma~~pEvd~Av~eIVneai 80 (533) T protein:vir:10 1 MSQLFGFSLERAKKAPKGPSFVQKDNLDGSQPVSGGGYYGYTVDFDGQVRNEYQLISRYREMVLQPECDSAVDDIVNETI 80 (533) T ss_pred CccccccccccccccccCCCCCCCCcccccceeecccccceeeecccccchHHHHHHHHHHHhhccchhhHHHHhhccee Confidence 66 23 21221 11111 0111111111 11111110 224678999999999998876 Q ss_pred cc-----eeEEEecCCc------ccccchHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCC--CceeEEEe Q lcl|Aclame:pro 54 RF-----PLVKKDVNGD------IIHDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPK--TNQALQFQ 120 (406) Q Consensus 54 ~~-----~~~~~~~~~~------~~~~~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~--~g~~~~l~ 120 (406) -+ |+.+.=.+.+ ........++|+. -+-...+ ..++..|.+.|..|..++.|.. ..-+.++. T Consensus 81 v~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~l-l~F~~~~----~e~fR~WYVDgRi~fHkiid~~~pk~GI~ELr 155 (533) T protein:vir:10 81 CGNFDDVPVSVELSNLKVSDKIKKLIREEFGEILRL-LDFENRS----YEIFRRWYVDGRLFYHKVIDPDNPQGGLIELR 155 (533) T ss_pred eecCCCceEEEEecccccchHHHHHHHHHHHHHHHH-hccchhh----hHHHhhhhhcceEEEEEEecCCCccccceeee Confidence 54 2333211111 1112233344431 2223333 4456677788999988776633 24588999 Q ss_pred ecCCeeEEEEEcc-----Cc------------ceEEEEEeec------CCeEEEEcceeeEeecc--CCCCCccccCHHH Q lcl|Aclame:pro 121 FYRPSETTVEETD-----NH------------EIVYTFTDML------TAKQVKCFAHDVIHWKF--FSHDTILGRSPLL 175 (406) Q Consensus 121 ~l~p~~~~~~~~~-----~g------------~~~~~~~~~~------~g~~~~~~~~~vih~r~--~~~~~~~G~s~~~ 175 (406) .|+|..++.++.- ++ ...-++.+.. .+..++++.+-|.+... ...++-.-+|-+. T Consensus 156 ~lDPr~i~~vr~i~~~~~~~~~~~~~~~~v~~~~~eyf~Ynp~g~~~~~~~~vkI~~dAI~y~hSGl~d~~~~~i~syLh 235 (533) T protein:vir:10 156 YIDPRKIRKINETEQKRPEQLRGLPLNQQLSPKSAEYFLYDPKGLKNSTTQGLKIAPDSICYVHSGIMDLNKNMTLSHLH 235 (533) T ss_pred eccccceeeeeeeeccCCCccceeecchhhhccceeeeeeccccccccCCCceecchhheeeeeccceeCCCCceeccch Confidence 9999998874321 11 1111111121 23345666654433221 1223333457777 Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcceEE-eecCCCCHHHHHHHHHHHHHHh---------ccc---ccCceeec---- Q lcl|Aclame:pro 176 SLGDEIDLQTGGINTLIKFFKDGFSSGILT-MKGAQLSGDARQRARQEFEKMR---------EGS---VGGSPLVF---- 238 (406) Q Consensus 176 ~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~---------~g~---~~~~~~vl---- 238 (406) .|...+....-+.....-+-=..++-+-++ .-.+.+-+...++....+-..+ +|. +......| T Consensus 236 kAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddrk~msMlEDyW 315 (533) T protein:vir:10 236 KAIKAVNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKNKAEQYLREVMGRYRNKLVYDANTGEIKDDKKFMSMLEDFW 315 (533) T ss_pred HhHHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccchhhhhHhhhc Confidence 777777666666655554432333333333 3334444434444333333222 221 11112222 Q ss_pred ------cCCceeeeccCChhHHHHHHHHHHHHHHHHHHhcCCHHHhcccccch---hHHH-HHHHHHHHHHHHHHHHH-- Q lcl|Aclame:pro 239 ------DSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQ---SVAQ-LMEDYVTNDLPFYFDAI-- 306 (406) Q Consensus 239 ------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~---n~~~-~~~~~~~~~i~P~~~~i-- 306 (406) ..|.+++.|.-. +-+.-++-.++..+.+.++++||.+-|+..+..+ ..|= ..+.=++..|.-+-..+ T Consensus 316 LPRReGgrgTEItTLpGg-qnLgem~DV~YF~kKLY~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~KFI~RLR~rFs~ 394 (533) T protein:vir:10 316 LPRREGGRGTEITTLPGG-QNLGELEDVKYFQKKLYKSLNVPGSRLETETTFNVGRAAEITRDEVKFQKFVARLRKRFSE 394 (533) T ss_pred ccccCCCCccceeecccc-CCcChHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHHHHHHHHHHHHHH Confidence 246777776532 1122334455677889999999999997543221 1111 11122233344444444 Q ss_pred --HHHHHhhccC-----ccchh----hhhhhhcccc---------hhHHHHHHHHHH--HhCCCcCHHHHHHH-hCC--- Q lcl|Aclame:pro 307 --TSELGLKTLN-----DKDRR----LYHIEFDTRS---------VTGRNVDEIVKL--VNNQILTPNQGLVE-LGK--- 360 (406) Q Consensus 307 --e~~l~~~l~~-----~~~~~----~~~~~~~~~~---------~~~~~~~~~~~~--~~~g~~t~NE~R~~-~g~--- 360 (406) .+-|...|+. ..++. .+.++|..+. .+..|+..+..+ +-+-.++.+=+|+. |.+ T Consensus 395 lF~~~Lk~qLiLKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~dyi~k~ILr~tDe 474 (533) T protein:vir:10 395 LFTDLLKTQLVLKGVISIEEWDQMKEHIQYDYIADNYFAELKEIEIRNERMNQVATMDPFVGKYFSVEYMRRQVLKQTDV 474 (533) T ss_pred HHHHHHHHhhhhccCCCHHHHHHHhhcceEeeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchHHHHHHHhccCHH Confidence 4444444332 23332 2233332211 233444444332 11123344433322 222 Q ss_pred ---------------CCCCCCCCCeeeeccCccchhhccccccccCcccCCCc----------cCCCCCCC Q lcl|Aclame:pro 361 ---------------QKSTDPNMDRYQSSLNYVFLDKKEEYQDKVGIKGKGGE----------VNAEEDKS 406 (406) Q Consensus 361 ---------------~p~~~~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~gg~----------~~~~~~~~ 406 (406) +.+++|..+ .+... ....+..||. +-+.+-+- T Consensus 475 ei~~~~kqI~~E~k~~~~~~p~~~----------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (533) T protein:vir:10 475 EMKEIDKQIESEMESGIIADPAAE----------MDPAM----AAGDPDAGGAPAEEVAPEGPDPSDERKA 531 (533) T ss_pred HHHHHHHHHHHHHhCCCCCCCcch----------hhHHh----cCCCCCcCCcccccCCCCCCCcchhhcc Confidence 222222211 11100 0111111111 11111111 No 262 >protein:vir:94599 Length: 641 # NCBI annotation: PfWMP4_39 # Family: family:all:1548 # MgeID: mge:1525 # MgeName: Pf-WMP4 # Cross-refs: genbank:acc:YP_762669;genbank:gi:115304377;genbank:GeneID:5142299 Probab=34.68 E-value=1.3 Score=20.00 Aligned_cols=386 Identities=10% Similarity=0.068 Sum_probs=144.1 Q ss_pred CcccccccCCCCcchhhHHHhhcC-----------------Cccc-ccchhhhhccHHHHHHHHHHHHhhccc--e---e Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAG-----------------DVSQ-KYLGVSALKNSDILTATSIIAGDIARF--P---L 57 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~-----------------~~~~-~~~~~~a~~~~~v~~~i~~ia~~ia~~--~---~ 57 (406) =.-|+..+..+.++...|.+.... ..+. .....+-+-.+++..+++.|+..+.+. | | T Consensus 30 ~~~~~~~~~~R~~~e~~W~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ki~~~~~~~~~~~l~s~Lm~~~~p~~~w 109 (641) T protein:vir:94 30 ISKWQESRDKRNTVENNWDETYELYRASAIDRQNTRARNFQTTGADDADWRHRINTGHTFEVVETLVAYFKGATFPSDDW 109 (641) T ss_pred HHHHHHHHHhhcchHHHHHHHHHHhhcchhhhhhcccccccccccchhcccccccchhHHHHHHHHhhHHhhhhcCCCce Confidence 011222222333333333222110 0000 001112344677888888777776553 2 3 Q ss_pred EEEecCCcccccchHHHH----hhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecC-----------CCcee------ Q lcl|Aclame:pro 58 VKKDVNGDIIHDEDINYL----LNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDP-----------KTNQA------ 116 (406) Q Consensus 58 ~~~~~~~~~~~~~~~~~l----L~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~-----------~~g~~------ 116 (406) .-+...... +...+.+ ++..-+. ..+++-...++.+.+.+|++++.+-++. .+|.+ T Consensus 110 f~~~p~~~e--d~~~A~~~~~~~~~~l~~-~~~~~~~~~~~~d~~~~g~~iv~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 186 (641) T protein:vir:94 110 FDLKGMVPE--LADAARVVKQLTKTKLEA-ASIRDIFETYVRNLVLYGVSTYRLGWDTSMERQFKRTFVETGDIFGGWED 186 (641) T ss_pred EEEecCCCC--hHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHhhcCceEEEeehhhHHHHhhhhhcccchhhcccccc Confidence 222111111 1122222 2222211 2345556688889999999887553221 01111 Q ss_pred ---------EEEeecCCeeEEEEEc--------------------------------------c------------Cc-- Q lcl|Aclame:pro 117 ---------LQFQFYRPSETTVEET--------------------------------------D------------NH-- 135 (406) Q Consensus 117 ---------~~l~~l~p~~~~~~~~--------------------------------------~------------~g-- 135 (406) +...|++|..+.+... + ++ T Consensus 187 ~~v~~~~~~~r~~~v~~~di~~dps~~~~~~~f~~~r~t~~t~~~l~~eg~~~~d~v~~~~~~~~~~~~~d~~~d~~~~~ 266 (641) T protein:vir:94 187 VAVNRQRSELRIEPLSPYDVWLDTSGGKNTGTFVRLRHTREELHELVTSGYYDLDLTQVEQYVDYKFADPDTPKDVNGTD 266 (641) T ss_pred cceecccceeeEEecchhheeecCCCCcccccceehhhhHHHHHHHHhcCCCChhhcchhhccccccccccccccccccc Confidence 1223333322211000 0 00 Q ss_pred ---ceEEEEEe--ecCCe-----EEEEcceee--------------EeeccCC-CCCccccCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 136 ---EIVYTFTD--MLTAK-----QVKCFAHDV--------------IHWKFFS-HDTILGRSPLLSLGDEIDLQTGGINT 190 (406) Q Consensus 136 ---~~~~~~~~--~~~g~-----~~~~~~~~v--------------ih~r~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~ 190 (406) ...|.++. ...|. ..++....| +++|+.+ .+..||.||.+.+...+...+.+.+. T Consensus 267 ~~~~~~~e~~gd~~~d~~~~~~~~~~~~g~~il~~~~~~~~d~~Pf~~~r~~~~~~~~YG~gp~~~~l~dqk~ln~l~r~ 346 (641) T protein:vir:94 267 TSGWDIIEYYGPLLVEGVQFWCVHAVFYGKQLIRLSDSKYWCGSPFVTTTLLPDRDSVYGMSVLHPNLGALHVLNVLTNG 346 (641) T ss_pred ccccceeeeeeeeccCCCceeeEEEEEeCCEEeecccccccCcCCeEEecceecCCcccCCChHHHHHHHHHHHHHHHHH Confidence 00000000 00010 011112222 3333332 23589999999999999999999988 Q ss_pred HHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeeeccCChhHHHH-HHHHHHHHHHHHH Q lcl|Aclame:pro 191 LIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTPLEIDTNVLQL-ITSNNFSTAQIAK 269 (406) Q Consensus 191 ~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~l~~~~~d~~~-~e~~~~~~~~Ia~ 269 (406) ..........|..++..+...+++.. ..+ -|+++.....-.+.++.....+.+. ....+.....|-. T Consensus 347 ~ld~~~~~~~p~~~~~~~~~~~~~~l----------~~~--PG~ii~~~~~~~v~pl~~~~~~~~~~~~~~~~~~~~i~~ 414 (641) T protein:vir:94 347 RLDNLVLHINKMWTLVEDGILKREDV----------KAK--PGAVFKVAQHGSLQPIDMGRQDFVVTYQEAQVQESSVYR 414 (641) T ss_pred HHHHHHHHhCCeeeecccccccccee----------ecc--CCcceeeCCCCcceeecCCccccchhHHHHHHHHHHHHH Confidence 88877666667666655555554332 111 1234444444445565332222111 1223334446777 Q ss_pred HhcCCHHHhcccc-cch--hHHHH--------------HHHHHHHHHHHHHHHHHHHHHhhccCc--------------- Q lcl|Aclame:pro 270 ALRVPSYKLGVNS-PNQ--SVAQL--------------MEDYVTNDLPFYFDAITSELGLKTLND--------------- 317 (406) Q Consensus 270 ~fgvpp~~lg~~~-~~~--n~~~~--------------~~~~~~~~i~P~~~~ie~~l~~~l~~~--------------- 317 (406) .|++....-|... ++. +..+- .+.|-...+.|+++.+-.-+.+.+..+ T Consensus 415 ~~~~~~~~~~~~~~~~~~~TAtEV~~~~~e~~~~l~~i~r~l~~e~l~pll~~~~~~~~~~~~~p~i~R~~~~~~~~~~~ 494 (641) T protein:vir:94 415 NTSTGPLIGNAAPRGGERVTAAEIQGVRDAGGNRLSSVHTHIEDSSTLPLLNKVFSLLQQFYVTPETIRMYVPEEQMDGF 494 (641) T ss_pred hhhhhhhhcccccccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhchhhhcccC Confidence 8888764433321 111 11111 123334455555555444333322111 Q ss_pred --cchhhhhhhhcccch----hHHHHH---HHHHHHhCC--------CcCHHH----HHHHhCCCCCCCCCCCeeeeccC Q lcl|Aclame:pro 318 --KDRRLYHIEFDTRSV----TGRNVD---EIVKLVNNQ--------ILTPNQ----GLVELGKQKSTDPNMDRYQSSLN 376 (406) Q Consensus 318 --~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~g--------~~t~NE----~R~~~g~~p~~~~~gd~~~~~~n 376 (406) .....+..+++.... ...+.. .+...++.. .+..+. +.+..|++ + +.. .+.. .. T Consensus 495 ~~~~p~~L~~~~~iv~l~~~q~~~~~~~i~~l~~~~~~~a~~P~v~d~~d~~~~~~~~~~~~g~~-~--p~~-~ir~-~~ 569 (641) T protein:vir:94 495 FEVSPEYLHYPYKFLALGANYVVERERMVTDLLQLLDISGRVPQIGQSLDYALILEDLLRQMRFT-D--PMR-YIKK-AE 569 (641) T ss_pred CCCCccceeeeeeEeecchhHHHHHHHHHHHHHHHHHHhhcChhhhhcCCHHHHHHHHHHHhCCC-C--chh-hccC-cc Confidence 111122223322111 111111 222222211 111222 22334553 1 111 1111 11 Q ss_pred cc----chhhccccccccC-cccCCCccCCCCCCC Q lcl|Aclame:pro 377 YV----FLDKKEEYQDKVG-IKGKGGEVNAEEDKS 406 (406) Q Consensus 377 ~~----~~~~~~~~~~~~~-~~~~gg~~~~~~~~~ 406 (406) .. +.......+.... .+.-||..++.--++ T Consensus 570 ~~~~~~~~~~~~~q~~~~~~a~~~~~~~~~~a~~~ 604 (641) T protein:vir:94 570 APPAAPPIAPAEPGALPPEMMNSVGGGLNDQAIAG 604 (641) T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH Confidence 11 1111000000000 011012111111111 No 263 >protein:vir:572 Length: 506 # NCBI annotation: unknown # Family: family:all:6660 # MgeID: mge:13 # MgeName: SPBc2 # Cross-refs: genbank:acc:NP_046607;genbank:gi:9630180;genbank:GeneID:1261432 Probab=33.76 E-value=1.3 Score=19.90 Aligned_cols=378 Identities=12% Similarity=0.077 Sum_probs=126.0 Q ss_pred CcccccccCCCCcchhhHHHhhcCCcccccchh----hhh--ccHHHHHHHHHHHHhhccce---eEEE--ecCCccccc Q lcl|Aclame:pro 1 MSFFQPLGTSKVSYDDYISSVLAGDVSQKYLGV----SAL--KNSDILTATSIIAGDIARFP---LVKK--DVNGDIIHD 69 (406) Q Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~a~--~~~~v~~~i~~ia~~ia~~~---~~~~--~~~~~~~~~ 69 (406) |++|+.-.-.... .+-+..|++. +..+.... +.. ....|+. +=+-|-++| +++. .+++.-.. T Consensus 34 ~~~~~NG~v~~i~-~~~L~~~F~N-PD~~~~~I~~L~~Y~YI~~~~i~Q----L~~LI~aLP~L~Y~I~~~~k~K~~~~- 106 (506) T protein:vir:57 34 SNMFSNGIVTEIE-AEQLKNYFSN-PDEFQEEIEDLAQYFYISTAEIHQ----LFELIEALPTLNYKIDSFNKVKSSDK- 106 (506) T ss_pred HHhhcCCceeeee-HHHHHhhhcC-hHHHHHHHHHHHHHhhhhcchHHH----HHHHHHhcCCcceeehhhhhccchhh- Confidence 4444331111100 0111111110 00000000 000 1111222 223334444 3332 22222111 Q ss_pred chHHHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEE---EEEccCcceEEE------ Q lcl|Aclame:pro 70 EDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETT---VEETDNHEIVYT------ 140 (406) Q Consensus 70 ~~~~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~---~~~~~~g~~~~~------ 140 (406) . ..+||..-.. .-...+-+.++.++...|--.-.-..+.. +-+|..-+.+. +.-...|..+-. T Consensus 107 -~-iS~lN~~L~K-v~HK~LTRDLL~Q~A~aGTLvG~WLG~~k-----~PY~~iF~~iKYVFP~~R~~G~~V~VvD~~~F 178 (506) T protein:vir:57 107 -H-ISLLNKSLHK-VKHKRLTRDLLKQVATAGTLVGIWLGDAK-----SPYPFIFDEIKYVFPSFRRNGDWVCVVDMELF 178 (506) T ss_pred -H-HHHHHHHHHH-HHHHHHHHHHHHHhhccCceeEeeecCCC-----CcchhhhhhhhhhccccccCCceEEEEehHHh Confidence 1 2223221111 11122333333333333321110011111 01111000000 000001110000 Q ss_pred ------------------EEeec------C---CeEEEEcceeeEeecc--CCCCCccccCHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 141 ------------------FTDML------T---AKQVKCFAHDVIHWKF--FSHDTILGRSPLLSLGDEIDLQTGGINTL 191 (406) Q Consensus 141 ------------------~~~~~------~---g~~~~~~~~~vih~r~--~~~~~~~G~s~~~~~~~~i~~~~~~~~~~ 191 (406) +.+.. + -+...+|.+.-+-.|- .+++.-.|.|......-.+.......... T Consensus 179 ~~~~~~~R~~~~~~LSP~I~~~~Y~~~~~~~~~~R~~~LP~~rT~~~R~~TL~RNQ~LG~~~~T~~L~Dv~HK~KLkD~E 258 (506) T protein:vir:57 179 TKYKDDQRNELLKSLSPYIKQSDYENFMKDREKYRFKELPQERTFPLRTGTLKRNQGLGTSWVTPGLYDVLHKKKLKDVE 258 (506) T ss_pred hhhhHHHHHHHHHhhhhhhhhhhhhhHhhhHHhhhhhhcccccchhheeeeecccccccccccchhHHHHHHHHHHHHHH Confidence 00000 0 0011223332222332 23444456665554444444333333332 Q ss_pred HHHHhcCCCcceEEeecCC----------CCHHHHHHHHHHHHHHhcccccCceeec--c--CCceeeec---cCChhHH Q lcl|Aclame:pro 192 IKFFKDGFSSGILTMKGAQ----------LSGDARQRARQEFEKMREGSVGGSPLVF--D--STMEYTPL---EIDTNVL 254 (406) Q Consensus 192 ~~~~~ng~~~~~~~~~~~~----------~~~e~~~~~~~~~~~~~~g~~~~~~~vl--~--~g~~~~~l---~~~~~d~ 254 (406) .+....-...-.+++...+ +.+....++-.-.+.+.......++.++ + +.+.|-.+ +..++.. T Consensus 259 ~SIA~KII~A~AVL~~~~~~~Ngeyt~~K~~~a~K~Ki~~GVK~ALEK~~KDGv~~vs~PDFA~~~FP~vK~~~LD~~K~ 338 (506) T protein:vir:57 259 RSIANKIINAVAVLTIGTDKGNGEYTNMKLPKAVKQKIHGGVKTALEKNQKDGVTVVSIPDFADINFPDVKADGLDGAKF 338 (506) T ss_pred HHHHHHHhhhheeeeeecccCCcccccccchHHHHHHHHHHHHHHHhcccccCeEEEecccccccccccccccCCCchhh Confidence 2222211111123332221 1122233333444444433233344433 2 22222222 2333333 Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHhcc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----ccchhhhhhhhcc Q lcl|Aclame:pro 255 QLITSNNFSTAQIAKALRVPSYKLGV-NSPNQSVAQLMEDYVTNDLPFYFDAITSELGLKTLN----DKDRRLYHIEFDT 329 (406) Q Consensus 255 ~~~e~~~~~~~~Ia~~fgvpp~~lg~-~~~~~n~~~~~~~~~~~~i~P~~~~ie~~l~~~l~~----~~~~~~~~~~~~~ 329 (406) +. ...+|-+++|++.+++++ .++|+++. ....-+-.-|.-+++.||+++-.+|+. ...+..+++..+. T Consensus 339 D~------I~~DI~~A~GlS~~L~NG~~GNYAts~-LNLD~FYKrIGV~~E~IEqEvY~~L~~lvL~~~~~~NY~~~Y~K 411 (506) T protein:vir:57 339 DH------INSDIQSAYGLSGSLLNGDGGNYATSS-LNLDTFYKRIGVLMEDIEQEVYQKLFNLVLPAAQKDNYYMNYDK 411 (506) T ss_pred cc------cchhhhhhhccchheecCCCcceeeee-chHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCceeEeeCC Confidence 33 335799999999999964 44555433 333344456888999999888888754 3334445555544 Q ss_pred c--chhHHHHHHHHHHHhCCCcCHHHHHH-HhCCCCC--------CC---CCCCeeeeccCccchhhccccccccCcccC Q lcl|Aclame:pro 330 R--SVTGRNVDEIVKLVNNQILTPNQGLV-ELGKQKS--------TD---PNMDRYQSSLNYVFLDKKEEYQDKVGIKGK 395 (406) Q Consensus 330 ~--~~~~~~~~~~~~~~~~g~~t~NE~R~-~~g~~p~--------~~---~~gd~~~~~~n~~~~~~~~~~~~~~~~~~~ 395 (406) + -..+++++.+.++-..|| ++--+.. .+|..-- +. .--++.+.|.|.-.+.. ...+.+.+ T Consensus 412 D~Pl~~~~K~D~LIKL~~~G~-S~K~V~Dnl~GvS~E~Y~E~tlYE~E~LKL~EKI~P~~~s~~~tG-----N~vG~P~~ 485 (506) T protein:vir:57 412 DKPLTLKEKMDILIKLNDKGW-SIKHVVDNLAGVSWESYLEQTLYETEELKLQEKIRPYQTSYTFTG-----NEVGRPNE 485 (506) T ss_pred CCccchhhhhchheeecccCc-cHHHHHHhhhccchHHHHHHHHHHHHHhhHHhhcCcccccceecc-----cccCCCCC Confidence 3 335566666655555554 2222222 2222100 00 00122222222211111 00111122 Q ss_pred CCccCCCCCCC Q lcl|Aclame:pro 396 GGEVNAEEDKS 406 (406) Q Consensus 396 gg~~~~~~~~~ 406 (406) |.++++..-+| T Consensus 486 ~~~~~D~Tv~S 496 (506) T protein:vir:57 486 GNKNNDNTVKS 496 (506) T ss_pred CCCcccchhhh Confidence 22222222222 No 264 >protein:vir:6322 Length: 510 # NCBI annotation: head-tail connector protein # Family: family:all:481 # MgeID: mge:132 # MgeName: phiKMV # Cross-refs: genbank:acc:NP_877469;genbank:gi:33300841;uniprot:Q7Y2D5;genbank:GeneID:1482611 Probab=30.63 E-value=1.6 Score=19.52 Aligned_cols=365 Identities=10% Similarity=-0.021 Sum_probs=123.8 Q ss_pred Cc-ccccccCCCCcchhhHHHhhcCCcccccchhhhhccHHHHHHHHHHHHhhc-cceeEEEecCC--------ccc--- Q lcl|Aclame:pro 1 MS-FFQPLGTSKVSYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIA-RFPLVKKDVNG--------DII--- 67 (406) Q Consensus 1 M~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia-~~~~~~~~~~~--------~~~--- 67 (406) +- +|.+-+...... ....+....+ .....-|-.+.+.... +-||.-..... ... T Consensus 29 lP~~~~~~~~~~~~~-----------~~~~~dstg~--~a~~~LAa~l~~~ltpp~~~WF~l~~~d~~~~~~~~~~~~~~ 95 (510) T protein:vir:63 29 LPYLMVDPMSGSRGV-----------VEHDFQSAGA--LLVNNLAAKLARSLFPTGIPFFRSELTDAIRREADSRDTDIT 95 (510) T ss_pred ccccCCCCCCccccc-----------cCCCccchHH--HHHHHHHHHHHhhhcCCCCcccccCCChHHhhcccccchhHH Confidence 11 111111000000 0000000000 0111122222333332 22332211110 000 Q ss_pred -ccchH---HHHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEeecCCeeEEEEEccCcce------ Q lcl|Aclame:pro 68 -HDEDI---NYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEI------ 137 (406) Q Consensus 68 -~~~~~---~~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~~l~p~~~~~~~~~~g~~------ 137 (406) ....+ .+.+... -...+.+.-+..++.++..+||+.+++..+ +.....||+. ...+..+..|++ T Consensus 96 ~v~~~L~~ve~~~~~~-l~~snf~~~~~~~~~~Li~~G~a~l~~~~~---~~~~~~~pl~--~y~v~~d~~G~vd~i~rr 169 (510) T protein:vir:63 96 EVTAALARVDRKATQR-LFQNASLAVLTQVIKLLIVTGNALLYRDSD---AATVVAWSLR--SYAVRRDATGRWMDIVLK 169 (510) T ss_pred HHHHHHHHHHHHHHHH-HHhcCcHHHHHHHHHHHHhhCeEEEEEcCC---CcEEEEEEcc--eeEEeeCCCcCeeEEEee Confidence 00000 0111100 011234455566677888999998776543 3344455553 233333333322 Q ss_pred --------------------------------------------EEEEEeecCCeEEE------EcceeeEeeccCCC-C Q lcl|Aclame:pro 138 --------------------------------------------VYTFTDMLTAKQVK------CFAHDVIHWKFFSH-D 166 (406) Q Consensus 138 --------------------------------------------~~~~~~~~~g~~~~------~~~~~vih~r~~~~-~ 166 (406) ++.++....|.... +..-..+-+|+... . T Consensus 170 ~~~t~~~l~e~~~~~~~~~~~~~~~~~~v~v~~~V~~~~~~~~~~~sv~~e~dg~~~~~~~~~~~~e~P~~~~Rw~~~~g 249 (510) T protein:vir:63 170 QRYKSKDLDEEYKQDLMRAGRNLSGSGSVDLYTHVQRKKGTAMEYAELYHEIDGVRVGKEGRWPIHLCPYIVPTWNLAPG 249 (510) T ss_pred eeccHHHHhHHhhhhhhccccccCCCcceEEEEEEEeecCCCceEEEEEEEecCceeccccccccccCceeeeeeeecCC Confidence 11111111111100 00001222233222 3 Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHHHHhcccccCceeeccCCceeee Q lcl|Aclame:pro 167 TILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMREGSVGGSPLVFDSTMEYTP 246 (406) Q Consensus 167 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~g~~~~~~~vl~~g~~~~~ 246 (406) ..||.||.+-+...+...+.+.+...........|...+...+...+.. ...|.+ |.+ +-...-++.+ T Consensus 250 e~YGrgp~~~~l~D~k~L~~l~~~~l~~a~~a~~~~~lv~p~g~~~~~~----------~~~~~~-g~~-v~g~~~~v~~ 317 (510) T protein:vir:63 250 EHYGRGHVEDYIGDFAKLSLLSEKLGLYELESLEVLNLVDEAKGAVVDD----------YQDAEM-GDY-VPGGAEAVRA 317 (510) T ss_pred CccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccCcccccchhh----------hccCCC-cee-ecCCccccee Confidence 4899999999999999999999988887777677766665544333221 112222 111 1111122333 Q ss_pred ccC-ChhHHHH-HHHHHHHHHHHHHHhcCCHHHhcccc-cchhHHHHH--------------HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 247 LEI-DTNVLQL-ITSNNFSTAQIAKALRVPSYKLGVNS-PNQSVAQLM--------------EDYVTNDLPFYFDAITSE 309 (406) Q Consensus 247 l~~-~~~d~~~-~e~~~~~~~~Ia~~fgvpp~~lg~~~-~~~n~~~~~--------------~~~~~~~i~P~~~~ie~~ 309 (406) +.. +..+++. .+..+..+..|..+|=+. +.... ..-+.+|-+ ..+....+.|++...-.. T Consensus 318 ~~~~~~~d~~~~~~~i~~~~~rI~~af~~~---l~~~~~~rvTAtEV~~r~~E~~~~LGpv~~rl~~E~l~Pli~r~~~i 394 (510) T protein:vir:63 318 YERGDYNKMAAIQQSLQAVVVRLNQAFMYG---ANQRDAERVTAEEVRITAEEAENTLGGTYSLLAENLQSPLAYVCLSE 394 (510) T ss_pred eecCcccchHHHHHHHHHHHHHHHHHHHhh---cccCCCCCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH Confidence 322 2344443 345667777888888432 22111 111222211 123344455555554444 Q ss_pred HHhhccC-ccchh--hhhhhhcccchhH-HH---HHHHHHHHh-CC-------CcCHH----HHHHHhCCCCCCCCCCCe Q lcl|Aclame:pro 310 LGLKTLN-DKDRR--LYHIEFDTRSVTG-RN---VDEIVKLVN-NQ-------ILTPN----QGLVELGKQKSTDPNMDR 370 (406) Q Consensus 310 l~~~l~~-~~~~~--~~~~~~~~~~~~~-~~---~~~~~~~~~-~g-------~~t~N----E~R~~~g~~p~~~~~gd~ 370 (406) +.++-++ ..... ...+.+ +..+-+ .+ ...+...++ .+ .+..+ ++.+.+|.+|.. . T Consensus 395 l~r~gl~p~p~~~~~~~~v~~-is~Laraq~~~~l~~~~q~l~~~~~~aq~~~~id~d~~~~~~a~~~Gv~p~~-----i 468 (510) T protein:vir:63 395 VDDALLQGLITKQHKPAIETG-LPALSRSAAVQSMLNASQVIAGLAPIAQLDPRISLPKMMDTIWAAFSVDTSQ-----F 468 (510) T ss_pred HHhccCCCCCchhcccceecc-hhHHHHHHHHHHHHHHHHHHHHhcCchhhhccCCHHHHHHHHHHHhCCChhH-----h Confidence 4333222 11111 111111 111111 11 111111111 11 12222 233444554421 0 Q ss_pred eeeccCccchhhc-cc---cccccCcccCCCc---cCCCCCC Q lcl|Aclame:pro 371 YQSSLNYVFLDKK-EE---YQDKVGIKGKGGE---VNAEEDK 405 (406) Q Consensus 371 ~~~~~n~~~~~~~-~~---~~~~~~~~~~gg~---~~~~~~~ 405 (406) +..+....-+-.. .. .+.........|- .+..-+= T Consensus 469 vrs~eev~a~~~~~~qq~~~~~~~~~~~~~~a~~~~~~~~g~ 510 (510) T protein:vir:63 469 YKSADELQAEAEQQRQQAAQAQAAQETLLEGASDMTNALAGV 510 (510) T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCC Confidence 1111110000000 00 0000000000000 0000000 No 265 >protein:vir:105641 Length: 516 # NCBI annotation: putative head-tail connector # Family: family:all:481 # MgeID: mge:1674 # MgeName: K1E # Cross-refs: genbank:acc:YP_425006;genbank:gi:83571754;uniprot:Q2WC46;genbank:GeneID:3837282 Probab=26.84 E-value=1.9 Score=19.05 Aligned_cols=377 Identities=9% Similarity=0.001 Sum_probs=147.6 Q ss_pred Cc----c--------cccccCCCCcchhhHHHhh---cC-----CcccccchhhhhccHHHHHHHHHHHHhhcc------ Q lcl|Aclame:pro 1 MS----F--------FQPLGTSKVSYDDYISSVL---AG-----DVSQKYLGVSALKNSDILTATSIIAGDIAR------ 54 (406) Q Consensus 1 M~----~--------f~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~------ 54 (406) |. + |+.++..+.++...+.... -. ....... ... -.++--.|++.+|..+-+ T Consensus 5 ~~~~~~~~~~~l~~r~~~L~~~R~~~e~~w~e~a~~~lP~~~~~~~~~~~~-~~~-~dstg~~a~~~LAa~l~~~ltpp~ 82 (516) T protein:vir:10 5 TDLEYGGKRSKIPKLWEKFSTKRSSFLDRAKHYSKLTLPYLMNDKGDNETS-QNG-WQGVGAQATNHLANKLAQVLFPAQ 82 (516) T ss_pred hhHhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhcccccCCCCCcccc-ccc-ccchHHHHHHHHHHHHHhhhcCCC Confidence 22 1 2333444455444332221 11 1111001 112 234445666666655433 Q ss_pred ceeEEEecCCc--------ccccchHHH-------HhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEE Q lcl|Aclame:pro 55 FPLVKKDVNGD--------IIHDEDINY-------LLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQF 119 (406) Q Consensus 55 ~~~~~~~~~~~--------~~~~~~~~~-------lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l 119 (406) -||.-...+.. ......+.. .+. .--..-+.+.-+..++.++..+||+.+|+.. .++ ... T Consensus 83 ~~WF~L~~~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~-~~l~~snf~~~~~~~~~~L~~~G~a~l~~d~--~~~--~~~ 157 (516) T protein:vir:10 83 RSFFRVDLTAQGEKVLNQRGLKKTELATIFAQVETRAM-KELEQRQFRPAVVEAFKHLIVAGSCMLYKPS--KGA--ISA 157 (516) T ss_pred CccccccCChhhHhhhhccCchhHHHHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHHHHhHCeEeEEecC--CCC--eEE Confidence 25543332110 011111111 111 1222335556667778888899999877643 322 345 Q ss_pred eecCCeeEEEEEccCcceEEEEE---------------------------------------eecCCeEEEE-------- Q lcl|Aclame:pro 120 QFYRPSETTVEETDNHEIVYTFT---------------------------------------DMLTAKQVKC-------- 152 (406) Q Consensus 120 ~~l~p~~~~~~~~~~g~~~~~~~---------------------------------------~~~~g~~~~~-------- 152 (406) ||+. .+.+..+..|++.-.+. ...++..... T Consensus 158 ~pl~--~y~v~~d~~G~v~~ivrr~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~~~i~t~v~~~~~~~~~~~~~~d~~~~ 235 (516) T protein:vir:10 158 IPMH--HYVVNRDTNGDLLDIILLQEKSLRTFDPATRAVVEVGLKGKKCKEDDSIKLYTHAKYLGEGFWELKQSADDIPV 235 (516) T ss_pred EEcC--eEEEeeCCCCCeEEEeeeecccHHHHHHHhhhhhhhhhhhhccCCCCceEEEEEEEecCCCceEEEEeeCceee Confidence 6653 34444455544321110 0001100000 Q ss_pred --------cceeeEeeccCCC-CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHH Q lcl|Aclame:pro 153 --------FAHDVIHWKFFSH-DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEF 223 (406) Q Consensus 153 --------~~~~vih~r~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~ 223 (406) ..-..+-+|+... ...||.||.+-+...+...+.+.+.......-...|.+++...+...+.. T Consensus 236 ~~~s~~~~~e~P~~~~Rw~~~~ge~YGrgp~~~~L~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~-------- 307 (516) T protein:vir:10 236 GKVSKIKSEKLPFIPLTWKRSYGEDWGRPLAEDYSGDLFVIQFLSEAVARGAALMADIKYLIRPGAQTDVDH-------- 307 (516) T ss_pred ccccccccccCCeeeeeeeecCCCCcccchHHHhhHHHHHHHHHHHHHHHHHHHhcCCCcccCcccccchhh-------- Confidence 0001122232222 34899999999999999999999998888877777776666554443221 Q ss_pred HHHhcccccCceeeccCCceeeeccC-ChhHHHH-HHHHHHHHHHHHHHhcCCHHHhcccccchhHHH--HHHHHHHHHH Q lcl|Aclame:pro 224 EKMREGSVGGSPLVFDSTMEYTPLEI-DTNVLQL-ITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQ--LMEDYVTNDL 299 (406) Q Consensus 224 ~~~~~g~~~~~~~vl~~g~~~~~l~~-~~~d~~~-~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~--~~~~~~~~~i 299 (406) ...|.+ | .++-...-.+.++.. +..+++. .+..+..+..|..+|-+.....-... .-+.++ .+..-....| T Consensus 308 --l~~~~~-g-~~~~g~~~~v~~~q~~~~~d~~~~~~~i~~~~~rI~~af~~~~l~~rd~~-rvTAtEV~~r~~E~~~~L 382 (516) T protein:vir:10 308 --FVNSGT-G-EVVTGVEEDIHIVQLGKYADLTPISAVLEVYTRRIGVVFMMETMTRRDAE-RVTAVEIQRDALEIEQNM 382 (516) T ss_pred --hccCCC-c-eeecCCcccceeeecCcccchHHHHHHHHHHHHHHHHHHhhhhhhccCCc-cccHHHHHHHHHHHHHHh Confidence 122222 1 122222223344332 2234443 34566777889888887643332211 112222 1123333445 Q ss_pred HHHHHHHHHHHHhhc--------cCccchhhhhhhhc--ccchhH-HHHHHHHH---HHh--CCC-------cC----HH Q lcl|Aclame:pro 300 PFYFDAITSELGLKT--------LNDKDRRLYHIEFD--TRSVTG-RNVDEIVK---LVN--NQI-------LT----PN 352 (406) Q Consensus 300 ~P~~~~ie~~l~~~l--------~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~---~~~--~g~-------~t----~N 352 (406) .|....+.++|=.-| +++-......+..- +..+.+ .+.+.+.. .+. .++ +. .+ T Consensus 383 Gpv~~rl~~Ell~Pli~r~~~~~~p~~P~~lv~~~~v~~i~~L~raq~~~~i~~~~q~i~~~~q~~p~v~d~id~d~~~~ 462 (516) T protein:vir:10 383 GGVYSLFATTMQSPVAMWGLLEAGDSFTSDLVDPVIITGIEALGRMAELDKLANFAQYMSLPLQWPEPVLAAVKWPDYMD 462 (516) T ss_pred hhHHHHHHHHHHHHHHHHHHHhhCCCCChhhcCcceehhHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHhhcCHHHHHH Confidence 555555444442221 22111111111110 111111 11111111 111 000 11 33 Q ss_pred HHHHHhCCCCCCCCCCCeeeeccCccc-hhhcc-cc-----ccccCcccCCCccCCCCCCC Q lcl|Aclame:pro 353 QGLVELGKQKSTDPNMDRYQSSLNYVF-LDKKE-EY-----QDKVGIKGKGGEVNAEEDKS 406 (406) Q Consensus 353 E~R~~~g~~p~~~~~gd~~~~~~n~~~-~~~~~-~~-----~~~~~~~~~gg~~~~~~~~~ 406 (406) ++.+.+|.|+- ++.+...+- +-... +. ..+......+|---++--++ T Consensus 463 ~~a~~~gvp~~-------~irs~eev~~~r~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~ 516 (516) T protein:vir:10 463 WVRGQISAELP-------FLKSAEEMEQEQEAQMQAQQAQMLEEGVAKAVPGVIQQELKEA 516 (516) T ss_pred HHHHHhCCChh-------ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhcC Confidence 44445555431 111111110 00000 00 01111112222211111222 No 266 >protein:vir:103330 Length: 517 # NCBI annotation: head portal-like protein # Family: family:all:481 # MgeID: mge:1609 # MgeName: Era103 # Cross-refs: genbank:acc:YP_001039666;genbank:gi:125999995;genbank:GeneID:4818406 Probab=23.26 E-value=2.3 Score=18.57 Aligned_cols=377 Identities=10% Similarity=0.033 Sum_probs=145.7 Q ss_pred Ccc------------cccccCCCCcchhhHHHhh---cCCc----ccccchhhhhccHHHHHHHHHHHHhhcc------c Q lcl|Aclame:pro 1 MSF------------FQPLGTSKVSYDDYISSVL---AGDV----SQKYLGVSALKNSDILTATSIIAGDIAR------F 55 (406) Q Consensus 1 M~~------------f~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~a~~~~~v~~~i~~ia~~ia~------~ 55 (406) |-. |+.+++.+.++...+.+.. -.+. .........+ .++.-.|++.+|..+.+ - T Consensus 1 ~~~~~~~e~~~l~~r~~~Lk~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~~-dstg~~a~~~LAa~l~~~ltpp~~ 79 (517) T protein:vir:10 1 MDMRFAGNKSKIPKLYEQLVGKRSPFLSRAENYSRFTLPYLMADVNDDLSSQNAW-QDDGASATNFLSNKLSQVLFPAQR 79 (517) T ss_pred CcccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHhccccccCCCCCccccccc-cchHHHHHHHHHHHHHHhhcCCCC Confidence 442 3344555555554333221 1110 1011111222 34445566666655533 2 Q ss_pred eeEEEecCCc--------c----cccchHH---HHhhhhccccCCHHHHHHHHHHHHHhcCCceEEEEecCCCceeEEEe Q lcl|Aclame:pro 56 PLVKKDVNGD--------I----IHDEDIN---YLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQ 120 (406) Q Consensus 56 ~~~~~~~~~~--------~----~~~~~~~---~lL~~~Pn~~~~~~~f~~~~~~~~~l~G~~~~~i~~~~~~g~~~~l~ 120 (406) ||.-...... . .....+. +.+. .--..-+.+.-+..+..++..+||+..|+.. . +.+...| T Consensus 80 ~WF~l~~~~~~l~~~~~~~~~~~~v~~~L~~ve~~~~-~~l~~snf~~~~~~~~~~L~~~G~a~ly~~~--~-~~~~~~~ 155 (517) T protein:vir:10 80 SFFRIDLTPEGIKQLDNEAMTQSTAQKLLSDVEKAAM-LYGESLQFRPAVVEAFKHLIVTGNVMMYHPD--K-TSPIQAV 155 (517) T ss_pred ccccccCCHHHHHhhccCcchHHHHHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHHHHhHCeEEEEEeC--C-CCcEEEE Confidence 5543332111 0 0111111 1111 1112235566677778889999999877532 2 3345566 Q ss_pred ecCCeeEEEEEccCcceEEE---------------------------------------EEeecCCeEEE---Ec----- Q lcl|Aclame:pro 121 FYRPSETTVEETDNHEIVYT---------------------------------------FTDMLTAKQVK---CF----- 153 (406) Q Consensus 121 ~l~p~~~~~~~~~~g~~~~~---------------------------------------~~~~~~g~~~~---~~----- 153 (406) |+. .+.+..+..|++.-. +....++.... +. T Consensus 156 pl~--~y~v~~d~~G~v~~ivrr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~~d~~~~~ 233 (517) T protein:vir:10 156 PLH--HYCVRRDNNGTVLDIVFLQEKALETFEPSIRMAIQASRKGKQYKDKDNVKLYTHAKRTKDGKYLIRQSADDVPVG 233 (517) T ss_pred EcC--eEEEeeCCCcCeEEEEeeeeccHHHHHHHhhhhcchhhhhhccCCcCceEEEEEEEEeCCCceEEEEEeCceeec Confidence 663 344444444433111 11111111100 00 Q ss_pred --------ceeeEeeccCCC-CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEeecCCCCHHHHHHHHHHHH Q lcl|Aclame:pro 154 --------AHDVIHWKFFSH-DTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFE 224 (406) Q Consensus 154 --------~~~vih~r~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~~~e~~~~~~~~~~ 224 (406) .-..+-.|+... ...||.||.+-+...+.....+.+.......-...|..++..+....+... T Consensus 234 ~~s~y~~~e~P~~~~Rw~~~~ge~YGrgp~~~~L~D~k~L~~l~~~~~~~~~~a~~~~~lv~~~~~~~~~~l-------- 305 (517) T protein:vir:10 234 KESTVTEDKSPFLILTWKRSYGEDYGRGMAEDHAGAFFVIQFLSEALARGMALMADVKYLVKPGSYTDINQF-------- 305 (517) T ss_pred cccccccccCCeeeeeeeecCCCCcccchHHHhHHHHHHHHHHHHHHHHHHHHhccCCcccCcccccchhhc-------- Confidence 001122233222 348999999999999999999999888887777777776655444432211 Q ss_pred HHhcccccCceeec--cCCceeeeccCChhHHH-HHHHHHHHHHHHHHHhcCCHHHhcccccchhHHH--HHHHHHHHHH Q lcl|Aclame:pro 225 KMREGSVGGSPLVF--DSTMEYTPLEIDTNVLQ-LITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQ--LMEDYVTNDL 299 (406) Q Consensus 225 ~~~~g~~~~~~~vl--~~g~~~~~l~~~~~d~~-~~e~~~~~~~~Ia~~fgvpp~~lg~~~~~~n~~~--~~~~~~~~~i 299 (406) ..|.+ + .++- .+++...++.. ..+++ ..+..+..+..|-.+|-+.....-... .-+.+| .+..-....| T Consensus 306 --~~~~~-g-~~~~g~~~~v~~~~~~~-~~d~~~~~~~i~~~~~rI~~af~~~~l~~~~~~-rvTAtEV~~r~~E~~~~L 379 (517) T protein:vir:10 306 --VEGGS-G-AVLHGVEGDIHIVQLGK-YADYTPIQAVLNDYRQRIGRVFMMEAMTRRDAE-RVTAYEIQRDAMLVEQSL 379 (517) T ss_pred --cCCCc-c-ccccCCcccceeeeccc-ccchhHHHHHHHHHHHHHHHHHhhhhhhccCCc-cccHHHHHHHHHHHHHHh Confidence 12221 1 1111 12233333333 23343 345566777889999976542221111 112222 1122333445 Q ss_pred HHHHHHHHHHHHhhccC--------ccchhhhhhhhcc--cchhH-HHHHHHHHH---Hh----C-C----CcCHHH--- Q lcl|Aclame:pro 300 PFYFDAITSELGLKTLN--------DKDRRLYHIEFDT--RSVTG-RNVDEIVKL---VN----N-Q----ILTPNQ--- 353 (406) Q Consensus 300 ~P~~~~ie~~l~~~l~~--------~~~~~~~~~~~~~--~~~~~-~~~~~~~~~---~~----~-g----~~t~NE--- 353 (406) .|....+.++|=.-|+. ......+.++... ....+ ..++.+... +. . . .+..++ T Consensus 380 Gpv~~rl~~Ell~Pli~r~~~~l~~~l~~~~v~~~~~s~la~l~r~~~~~~i~~~~~~i~~~a~~~~~~~~~id~d~~~~ 459 (517) T protein:vir:10 380 GGVYSLFATTFQGPLARWFMNGISSILTSKNVSPTILTGIEALGRMAELDKLGTFNGYVSMTAQWPEPLQQAIKWPDFTD 459 (517) T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhcCCCCccceeeccHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHhcCCHHHHHH Confidence 55555555443111110 0001111122211 11111 011111111 11 0 0 112222 Q ss_pred -HHHHhCCCCCCCCCCCeeeeccCccchhhcccc--c----------cccCcccCCCccCCCCCC Q lcl|Aclame:pro 354 -GLVELGKQKSTDPNMDRYQSSLNYVFLDKKEEY--Q----------DKVGIKGKGGEVNAEEDK 405 (406) Q Consensus 354 -~R~~~g~~p~~~~~gd~~~~~~n~~~~~~~~~~--~----------~~~~~~~~gg~~~~~~~~ 405 (406) +.+.+|.|+- ++.+..-+-....... + .......+.|..+-...+ T Consensus 460 ~~a~~~Gvp~~-------~irs~~ev~~~~~~~~~~~~~~~~~~~ag~~~~~~~~~~~~~~~~~~ 517 (517) T protein:vir:10 460 WVQGQISANFP-------FFKTQDELNAEAQAQQEQEATKYAAEQAGKAIPDMVKNGQINPQGGQ 517 (517) T ss_pred HHHHHhCCChh-------hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC Confidence 2233444421 1111100000000000 0 000001111222222222 Done!