Query lcl|Aclame:protein:vir:8841|NCBI_annot:constituent protein|genbank:acc:NP_775249;genbank:gi:27476047;genbank:GeneID:2700595 Match_columns 208 No_of_seqs 38 out of 41 Neff 5.5 Searched_HMMs 1612 Date Sat Nov 30 06:16:41 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_56 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_56_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:8841 Length: 208 # 100.0 3.9E-88 2.4E-91 499.8 22.7 208 1-208 1-208 (208) 2 protein:vir:3302 Length: 216 # 97.6 2.5E-05 1.6E-08 45.8 15.9 191 4-206 1-216 (216) 3 protein:vir:2779 Length: 216 # 97.6 2.5E-05 1.6E-08 45.8 15.9 191 4-206 1-216 (216) 4 protein:vir:823 Length: 216 # 97.6 2.5E-05 1.6E-08 45.8 15.9 191 4-206 1-216 (216) 5 protein:vir:105573 Length: 225 97.5 4.8E-05 3E-08 44.3 17.0 198 5-208 1-221 (225) 6 protein:vir:351 Length: 242 # 97.5 1.1E-05 6.7E-09 47.8 12.8 198 2-208 1-225 (242) 7 protein:vir:5111 Length: 234 # 97.3 3.1E-05 1.9E-08 45.3 13.5 192 1-208 1-232 (234) 8 protein:vir:93692 Length: 197 94.1 0.0053 3.3E-06 33.1 13.5 178 1-208 1-196 (197) 9 protein:vir:9964 Length: 223 # 93.0 0.0091 5.6E-06 31.8 12.8 175 1-208 34-218 (223) 10 protein:vir:10130 Length: 223 93.0 0.0091 5.6E-06 31.8 12.8 175 1-208 34-218 (223) 11 protein:vir:104383 Length: 166 91.1 0.018 1.1E-05 30.2 12.7 154 27-208 1-161 (166) 12 protein:vir:105646 Length: 245 65.3 0.29 0.00018 23.6 11.9 183 1-208 13-231 (245) 13 protein:vir:7020 Length: 246 # 64.4 0.3 0.00019 23.5 12.0 183 1-208 14-231 (246) 14 protein:vir:1542 Length: 196 # 59.1 0.4 0.00025 22.8 9.8 174 1-208 5-196 (196) 15 protein:vir:3365 Length: 196 # 50.3 0.61 0.00038 21.7 10.2 174 1-208 5-196 (196) 16 protein:vir:97033 Length: 245 48.2 0.68 0.00042 21.5 12.6 183 1-208 13-231 (245) 17 protein:vir:103305 Length: 245 42.0 0.9 0.00056 20.8 13.3 183 1-208 13-230 (245) 18 protein:vir:7328 Length: 201 # 38.8 1 0.00065 20.5 10.1 175 1-208 1-197 (201) 19 protein:vir:95323 Length: 201 33.9 1.3 0.00082 19.9 11.9 175 1-208 1-197 (201) 20 protein:vir:100103 Length: 120 31.5 0.77 0.00048 21.2 4.0 97 1-105 5-120 (120) 21 protein:vir:10365 Length: 115 27.1 1.2 0.00077 20.1 4.3 99 1-106 1-115 (115) 22 protein:vir:6325 Length: 184 # 20.9 2.7 0.0017 18.2 9.4 165 8-208 1-180 (184) No 1 >protein:vir:8841 Length: 208 # NCBI annotation: constituent protein # Family: family:all:6621 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775249;genbank:gi:27476047;genbank:GeneID:2700595 Probab=100.00 E-value=3.9e-88 Score=499.80 Aligned_cols=208 Identities=100% Similarity=1.524 Sum_probs=206.0 Q ss_pred CCCccCHHHHHHHHHHHhcccCcchhhhHHHHHHHHHHHHhhhcccccceEEEEEeeCceeecChhHHhHhhhhccCCCc Q lcl|Aclame:pro 1 MATINNVTDLAIAAIQWSDRQDLTQELLMLFIGNTTDRLNRLLRVRENEHFETLMAFGGGIEIPEHFVALRSITGDALIG 80 (208) Q Consensus 1 m~ai~~Y~~L~~av~~w~~R~Dlt~~~ip~FI~lAE~~lnR~LR~~~mE~~~~l~~~~g~~~LP~Dfle~r~i~~~~~~~ 80 (208) |++|+||++||++|++|++|+|+|+++||+||++||+||||+||+|+||++++|++++|+++||+||+|+|+|+..++.+ T Consensus 1 ~~~i~~Y~~L~~~~~~~l~R~Dlt~~~~p~FI~lAE~~inr~Lr~~~~e~~vtl~~~~g~~~LP~Df~e~r~i~~~~~~~ 80 (208) T protein:vir:88 1 MATINNVTDLAIAAIQWSDRQDLTQELLMLFIGNTTDRLNRLLRVRENEHFETLMAFGGGIEIPEHFVALRSITGDALIG 80 (208) T ss_pred CCCcCCHHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHhcccccceEEEEEecCceeeCChhHHHHHHHhhcCCCC Confidence 99999999999999999999999988899999999999999999999999999999999999999999999999999889 Q ss_pred ceeeeecCHHHHhhhhccccCCCCceEEEEEcCeEEEeeecCCCceEEEEeeccCCCCCCCCcccHHHHhchHHHHHHHH Q lcl|Aclame:pro 81 GRTLQYITQDIFSHYVNYNYQPQGVTYYTRLGNFWRVYPVVPDGAPFIVNYWTVLPELSLDNPTTWALTKYPQIYLYGVL 160 (208) Q Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~f~i~g~~i~~~P~p~~~~~~~l~Yy~~iP~LS~~n~tNWLL~~~PdiYLyg~l 160 (208) |+++.++++++++.|++.++++++|+||+|+|++|+|+|.|+++++++|+||++||+||++|||||||++|||+||||+| T Consensus 81 g~~l~~v~~~~~~~~~~~~~~~g~p~~yti~g~~i~~~P~p~~~~~~~i~Yy~~iP~LS~~n~tNwLl~~aPD~YLy~~L 160 (208) T protein:vir:88 81 GRTLQYITQDIFSHYVNYNYQPQGVTYYTRLGNFWRVYPVVPDGAPFIVNYWTVLPELSLDNPTTWALTKYPQIYLYGVL 160 (208) T ss_pred CceecccCHHHhhhhhhhccCccccceEEEEcCeEEEeeecCCCceEEEEeeeccCCCCCCCchhHHhhcchhHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhhHHhcCCceeeCCCCC Q lcl|Aclame:pro 161 EQIYLYTMDEERSMFWGQKLERAVMELQNEENAADFASSRLAIKDIER 208 (208) Q Consensus 161 ~ea~~~~~d~er~~~w~~~~~~al~~l~~~d~~~r~~~s~l~v~~~t~ 208 (208) +|||+|+||++|++.|+++++++|++|+++|++++|+|++++|||+.| T Consensus 161 ~ea~~f~~D~~ra~~~~~~~~~al~~L~~~d~~~~~~~~~l~i~~~~~ 208 (208) T protein:vir:88 161 EQIYLYTMDEERSMFWGQKLERAVMELQNEENAADFASSRLAIKDIER 208 (208) T ss_pred HHHHhcccCHhHHHHHHHHHHHHHHHHHhhhhhHHhcCCceeeecccC Confidence 999999999999999999999999999999999999999999999999 No 2 >protein:vir:3302 Length: 216 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:66 # MgeName: 933W # Cross-refs: genbank:acc:NP_049518;genbank:gi:9632524;genbank:GeneID:1262013 Probab=97.56 E-value=2.5e-05 Score=45.80 Aligned_cols=191 Identities=9% Similarity=0.084 Sum_probs=112.7 Q ss_pred ccCHHHHHHHHHHHhcccCc---chhhhHHHHHHHHHHHHhhhcccc-cceEEEEEeeCce-eecChhHHhHhhhhccCC Q lcl|Aclame:pro 4 INNVTDLAIAAIQWSDRQDL---TQELLMLFIGNTTDRLNRLLRVRE-NEHFETLMAFGGG-IEIPEHFVALRSITGDAL 78 (208) Q Consensus 4 i~~Y~~L~~av~~w~~R~Dl---t~~~ip~FI~lAE~~lnR~LR~~~-mE~~~~l~~~~g~-~~LP~Dfle~r~i~~~~~ 78 (208) ..|-++|..-+..=+.=.+- ++.-+-+|++=|-..+= ||-|. -.+..++.+..|+ ..||.|.+.++.+.-- T Consensus 1 ~~t~~~lI~r~~~~l~D~~~~rW~~~el~~~lNdAv~e~~--l~rpda~~~~~~i~l~~Gt~q~~p~~~~~lI~v~r~-- 76 (216) T protein:vir:33 1 MTTITEIIGRVNTQLVDPMMVRWPLQELCDYYNDAVRAVI--LARPDAGASLETISCVPGARQVLPDGVIQLLDVICL-- 76 (216) T ss_pred CccHHHHHHHHHHhhhcccccccChHHHHHHHHHHHHHHH--hhcCCCCcceeeEeccccccccccchhhhhhhhhhh-- Confidence 44556666666554432220 11223467766655442 44333 3445778888888 6699999998877633 Q ss_pred CcceeeeecCHHHHhhhhccc--cCCCCceEEEEEcC---eEEEeeecCCCceEEEEeeccCC---CCCCCCccc-HHHH Q lcl|Aclame:pro 79 IGGRTLQYITQDIFSHYVNYN--YQPQGVTYYTRLGN---FWRVYPVVPDGAPFIVNYWTVLP---ELSLDNPTT-WALT 149 (208) Q Consensus 79 ~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~f~i~g~---~i~~~P~p~~~~~~~l~Yy~~iP---~LS~~n~tN-WLL~ 149 (208) ..|+++..++.+.++...-.= ..+. |.+|+-... .++++|.|+.+..|++.||.... .++.+-++- =|-+ T Consensus 77 ~~g~a~~~vsre~LD~~~P~W~~~~g~-p~~~i~de~~pr~f~l~P~p~~~~~vel~~~r~P~a~~~~~~~dd~~~~i~~ 155 (216) T protein:vir:33 77 SDGSAVRPLSREVLDAQYPEWPTMKGI-PECFISNDLSPRVFWLFPAPDKEISIDAVVSRIPEAVYVLTQDDDTPVPLEE 155 (216) T ss_pred CCCCceeeecHHHhcccCCCcCCCCCC-ceEEEecCCCceEEEEeccCCCCcEEEEEEEecCcchhhccCCCCCCCCcch Confidence 236889999999988532111 1122 566766554 34499999999999999998653 333332222 1223 Q ss_pred hchHHHHHHHHHHHHHhhc------ChhHHHHHHHHHHHHHHHHHHhhh-----hHHhcCCceeeCCC Q lcl|Aclame:pro 150 KYPQIYLYGVLEQIYLYTM------DEERSMFWGQKLERAVMELQNEEN-----AADFASSRLAIKDI 206 (208) Q Consensus 150 ~~PdiYLyg~l~ea~~~~~------d~er~~~w~~~~~~al~~l~~~d~-----~~r~~~s~l~v~~~ 206 (208) .|=+..+.=+|+-| |-| |.+|++...|+|+++++.-+..|. +..+.|+ |+ T Consensus 156 ~y~~~Lvdw~lyRa--~skd~~~~~d~~rA~~h~q~F~~~lG~k~~ad~~~~~r~~~~~~~-----~~ 216 (216) T protein:vir:33 156 AYVNPLVEWMLFRA--FSKDAAGGAESGLAAQHYQSFVEQLGIKQGADSALYARKKVFNGG-----GV 216 (216) T ss_pred hhhHHHHHHHHHHH--hcCcCccccChHHHHHHHHHHHHHhCCchHHHhHHHHHHhhccCC-----CC Confidence 33333333344444 444 556999999999999987666553 2223333 33 No 3 >protein:vir:2779 Length: 216 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:59 # MgeName: Stx2 converting bacteriophage I # Cross-refs: genbank:acc:NP_612896;genbank:gi:20065813;genbank:GeneID:935638 Probab=97.56 E-value=2.5e-05 Score=45.80 Aligned_cols=191 Identities=9% Similarity=0.084 Sum_probs=112.7 Q ss_pred ccCHHHHHHHHHHHhcccCc---chhhhHHHHHHHHHHHHhhhcccc-cceEEEEEeeCce-eecChhHHhHhhhhccCC Q lcl|Aclame:pro 4 INNVTDLAIAAIQWSDRQDL---TQELLMLFIGNTTDRLNRLLRVRE-NEHFETLMAFGGG-IEIPEHFVALRSITGDAL 78 (208) Q Consensus 4 i~~Y~~L~~av~~w~~R~Dl---t~~~ip~FI~lAE~~lnR~LR~~~-mE~~~~l~~~~g~-~~LP~Dfle~r~i~~~~~ 78 (208) ..|-++|..-+..=+.=.+- ++.-+-+|++=|-..+= ||-|. -.+..++.+..|+ ..||.|.+.++.+.-- T Consensus 1 ~~t~~~lI~r~~~~l~D~~~~rW~~~el~~~lNdAv~e~~--l~rpda~~~~~~i~l~~Gt~q~~p~~~~~lI~v~r~-- 76 (216) T protein:vir:27 1 MTTITEIIGRVNTQLVDPMMVRWPLQELCDYYNDAVRAVI--LARPDAGASLETISCVPGARQVLPDGVIQLLDVICL-- 76 (216) T ss_pred CccHHHHHHHHHHhhhcccccccChHHHHHHHHHHHHHHH--hhcCCCCcceeeEeccccccccccchhhhhhhhhhh-- Confidence 44556666666554432220 11223467766655442 44333 3445778888888 6699999998877633 Q ss_pred CcceeeeecCHHHHhhhhccc--cCCCCceEEEEEcC---eEEEeeecCCCceEEEEeeccCC---CCCCCCccc-HHHH Q lcl|Aclame:pro 79 IGGRTLQYITQDIFSHYVNYN--YQPQGVTYYTRLGN---FWRVYPVVPDGAPFIVNYWTVLP---ELSLDNPTT-WALT 149 (208) Q Consensus 79 ~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~f~i~g~---~i~~~P~p~~~~~~~l~Yy~~iP---~LS~~n~tN-WLL~ 149 (208) ..|+++..++.+.++...-.= ..+. |.+|+-... .++++|.|+.+..|++.||.... .++.+-++- =|-+ T Consensus 77 ~~g~a~~~vsre~LD~~~P~W~~~~g~-p~~~i~de~~pr~f~l~P~p~~~~~vel~~~r~P~a~~~~~~~dd~~~~i~~ 155 (216) T protein:vir:27 77 SDGSAVRPLSREVLDAQYPEWPTMKGI-PECFISNDLSPRVFWLFPAPDKEISIDAVVSRIPEAVYVLTQDDDTPVPLEE 155 (216) T ss_pred CCCCceeeecHHHhcccCCCcCCCCCC-ceEEEecCCCceEEEEeccCCCCcEEEEEEEecCcchhhccCCCCCCCCcch Confidence 236889999999988532111 1122 566766554 34499999999999999998653 333332222 1223 Q ss_pred hchHHHHHHHHHHHHHhhc------ChhHHHHHHHHHHHHHHHHHHhhh-----hHHhcCCceeeCCC Q lcl|Aclame:pro 150 KYPQIYLYGVLEQIYLYTM------DEERSMFWGQKLERAVMELQNEEN-----AADFASSRLAIKDI 206 (208) Q Consensus 150 ~~PdiYLyg~l~ea~~~~~------d~er~~~w~~~~~~al~~l~~~d~-----~~r~~~s~l~v~~~ 206 (208) .|=+..+.=+|+-| |-| |.+|++...|+|+++++.-+..|. +..+.|+ |+ T Consensus 156 ~y~~~Lvdw~lyRa--~skd~~~~~d~~rA~~h~q~F~~~lG~k~~ad~~~~~r~~~~~~~-----~~ 216 (216) T protein:vir:27 156 AYVNPLVEWMLFRA--FSKDAAGGAESGLAAQHYQSFVEQLGIKQGADSALYARKKVFNGG-----GV 216 (216) T ss_pred hhhHHHHHHHHHHH--hcCcCccccChHHHHHHHHHHHHHhCCchHHHhHHHHHHhhccCC-----CC Confidence 33333333344444 444 556999999999999987666553 2223333 33 No 4 >protein:vir:823 Length: 216 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:16 # MgeName: VT2-Sa # Cross-refs: genbank:acc:NP_050556;genbank:gi:9633453;genbank:GeneID:1262282 Probab=97.56 E-value=2.5e-05 Score=45.80 Aligned_cols=191 Identities=9% Similarity=0.084 Sum_probs=112.7 Q ss_pred ccCHHHHHHHHHHHhcccCc---chhhhHHHHHHHHHHHHhhhcccc-cceEEEEEeeCce-eecChhHHhHhhhhccCC Q lcl|Aclame:pro 4 INNVTDLAIAAIQWSDRQDL---TQELLMLFIGNTTDRLNRLLRVRE-NEHFETLMAFGGG-IEIPEHFVALRSITGDAL 78 (208) Q Consensus 4 i~~Y~~L~~av~~w~~R~Dl---t~~~ip~FI~lAE~~lnR~LR~~~-mE~~~~l~~~~g~-~~LP~Dfle~r~i~~~~~ 78 (208) ..|-++|..-+..=+.=.+- ++.-+-+|++=|-..+= ||-|. -.+..++.+..|+ ..||.|.+.++.+.-- T Consensus 1 ~~t~~~lI~r~~~~l~D~~~~rW~~~el~~~lNdAv~e~~--l~rpda~~~~~~i~l~~Gt~q~~p~~~~~lI~v~r~-- 76 (216) T protein:vir:82 1 MTTITEIIGRVNTQLVDPMMVRWPLQELCDYYNDAVRAVI--LARPDAGASLETISCVPGARQVLPDGVIQLLDVICL-- 76 (216) T ss_pred CccHHHHHHHHHHhhhcccccccChHHHHHHHHHHHHHHH--hhcCCCCcceeeEeccccccccccchhhhhhhhhhh-- Confidence 44556666666554432220 11223467766655442 44333 3445778888888 6699999998877633 Q ss_pred CcceeeeecCHHHHhhhhccc--cCCCCceEEEEEcC---eEEEeeecCCCceEEEEeeccCC---CCCCCCccc-HHHH Q lcl|Aclame:pro 79 IGGRTLQYITQDIFSHYVNYN--YQPQGVTYYTRLGN---FWRVYPVVPDGAPFIVNYWTVLP---ELSLDNPTT-WALT 149 (208) Q Consensus 79 ~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~f~i~g~---~i~~~P~p~~~~~~~l~Yy~~iP---~LS~~n~tN-WLL~ 149 (208) ..|+++..++.+.++...-.= ..+. |.+|+-... .++++|.|+.+..|++.||.... .++.+-++- =|-+ T Consensus 77 ~~g~a~~~vsre~LD~~~P~W~~~~g~-p~~~i~de~~pr~f~l~P~p~~~~~vel~~~r~P~a~~~~~~~dd~~~~i~~ 155 (216) T protein:vir:82 77 SDGSAVRPLSREVLDAQYPEWPTMKGI-PECFISNDLSPRVFWLFPAPDKEISIDAVVSRIPEAVYVLTQDDDTPVPLEE 155 (216) T ss_pred CCCCceeeecHHHhcccCCCcCCCCCC-ceEEEecCCCceEEEEeccCCCCcEEEEEEEecCcchhhccCCCCCCCCcch Confidence 236889999999988532111 1122 566766554 34499999999999999998653 333332222 1223 Q ss_pred hchHHHHHHHHHHHHHhhc------ChhHHHHHHHHHHHHHHHHHHhhh-----hHHhcCCceeeCCC Q lcl|Aclame:pro 150 KYPQIYLYGVLEQIYLYTM------DEERSMFWGQKLERAVMELQNEEN-----AADFASSRLAIKDI 206 (208) Q Consensus 150 ~~PdiYLyg~l~ea~~~~~------d~er~~~w~~~~~~al~~l~~~d~-----~~r~~~s~l~v~~~ 206 (208) .|=+..+.=+|+-| |-| |.+|++...|+|+++++.-+..|. +..+.|+ |+ T Consensus 156 ~y~~~Lvdw~lyRa--~skd~~~~~d~~rA~~h~q~F~~~lG~k~~ad~~~~~r~~~~~~~-----~~ 216 (216) T protein:vir:82 156 AYVNPLVEWMLFRA--FSKDAAGGAESGLAAQHYQSFVEQLGIKQGADSALYARKKVFNGG-----GV 216 (216) T ss_pred hhhHHHHHHHHHHH--hcCcCccccChHHHHHHHHHHHHHhCCchHHHhHHHHHHhhccCC-----CC Confidence 33333333344444 444 556999999999999987666553 2223333 33 No 5 >protein:vir:105573 Length: 225 # NCBI annotation: hypothetical protein # Family: family:all:1423 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164310;genbank:gi:56692957;genbank:GeneID:3197184 Probab=97.52 E-value=4.8e-05 Score=44.25 Aligned_cols=198 Identities=9% Similarity=0.012 Sum_probs=123.8 Q ss_pred cCHHHHHHHHHHHhccc-C-c--chhhhHHHHHHHHHHHH---hhhcccccceEEEEEeeCce-eecChhHHhHhhh-h- Q lcl|Aclame:pro 5 NNVTDLAIAAIQWSDRQ-D-L--TQELLMLFIGNTTDRLN---RLLRVRENEHFETLMAFGGG-IEIPEHFVALRSI-T- 74 (208) Q Consensus 5 ~~Y~~L~~av~~w~~R~-D-l--t~~~ip~FI~lAE~~ln---R~LR~~~mE~~~~l~~~~g~-~~LP~Dfle~r~i-~- 74 (208) -|-++|...+..=++=. + . ++.-+-+|++=|-..+= |+||=.---+..++.+..|+ ..+|.+.+.++.+ . T Consensus 1 m~~~~lI~r~~~~l~D~~~~~rW~~~el~~~lNdAv~e~~~r~rL~rpda~~~~~~i~l~~Gt~q~~~~~~~~~I~~~~~ 80 (225) T protein:vir:10 1 MTLADLIRRVRTDANDMVEPYFWSDQDVADWLNDAVREAAVRGRLIHESQADAVCRIEVVAGTAVYQLHASLYELSHLGF 80 (225) T ss_pred CCHHHHHHHHHHHhccccccccCChHHHHHHHHHHHHHHHHhcccccccCCCceeeeeecCccccccCchHHHHHHHHhh Confidence 36667776666555421 2 0 12224578887766654 24443333455778888886 4577776554433 2 Q ss_pred -ccCCCcceeeeecCHHHHhhh----hccccCCCCceEEEEEcCeEEEeeecCCCceEEEEeeccCC---CCCC-CCccc Q lcl|Aclame:pro 75 -GDALIGGRTLQYITQDIFSHY----VNYNYQPQGVTYYTRLGNFWRVYPVVPDGAPFIVNYWTVLP---ELSL-DNPTT 145 (208) Q Consensus 75 -~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~f~i~g~~i~~~P~p~~~~~~~l~Yy~~iP---~LS~-~n~tN 145 (208) ..++..++++..++.+.+.+. +..++ .|.||+-.-+.++++|.|+.+..++|.||...- +.++ +-..- T Consensus 81 ~~~~~~~~~~~~~~s~e~LD~~~P~W~~~tg---~p~~~~~d~~~~~l~P~p~~~~~vel~~~r~P~~~~~~~~~D~~~p 157 (225) T protein:vir:10 81 YPADMSRPTMPVLKSAEVLDVELPEWRACTG---KPLYAIQGDTSLRLVPTPDRAGILRVEGYRTPLADMALADKDTAQP 157 (225) T ss_pred cCcccCCceecccccHHHhcccCCCcccCCC---CceEEEeCCcEEEEEecCCCceEEEEEEEeecchhhhccccccccC Confidence 344455677888888888753 22222 357888888999999999999999999998751 1222 21234 Q ss_pred HHHHhchHHHHHHHHHHHHH----hhcChhHHHHHHHHHHHHHHHHHHhhhhHHhcCCceeeCCCCC Q lcl|Aclame:pro 146 WALTKYPQIYLYGVLEQIYL----YTMDEERSMFWGQKLERAVMELQNEENAADFASSRLAIKDIER 208 (208) Q Consensus 146 WLL~~~PdiYLyg~l~ea~~----~~~d~er~~~w~~~~~~al~~l~~~d~~~r~~~s~l~v~~~t~ 208 (208) ++.+.|=...+.=+|+-|+. ...|.++++...|+|+.+++.-+..|.+ |.. +-.++-.+| T Consensus 158 ~i~~~y~~~Lvdw~lyRa~skd~~~~~d~~rA~~h~q~F~~alG~k~~ad~~-r~~--r~~~p~~~~ 221 (225) T protein:vir:10 158 EIHAEHHRHLVQWALYRGFSIPDMESFDPNRAALAEAAFTAYFGERPDSDLR-RIT--REDVPHHVE 221 (225) T ss_pred ccchhhHHHHHHHHHHHHhcCcCccccChHHHHHHHHHHHHHhCCchhHHHH-Hhc--cccCccccc Confidence 66666655555556655542 3456789999999999999887765533 222 234455566 No 6 >protein:vir:351 Length: 242 # NCBI annotation: hypothetical protein # Family: family:all:3196 # MgeID: mge:9 # MgeName: Mx8 # Cross-refs: genbank:acc:NP_203465;genbank:gi:15320621;genbank:GeneID:921727 Probab=97.46 E-value=1.1e-05 Score=47.82 Aligned_cols=198 Identities=11% Similarity=-0.025 Sum_probs=107.2 Q ss_pred CCccCHHHHHHHHHHH--hcccC---c---chhhhHHHHHHHHHHHHhhhc---ccccceEEEEEeeCc--eeecChhHH Q lcl|Aclame:pro 2 ATINNVTDLAIAAIQW--SDRQD---L---TQELLMLFIGNTTDRLNRLLR---VRENEHFETLMAFGG--GIEIPEHFV 68 (208) Q Consensus 2 ~ai~~Y~~L~~av~~w--~~R~D---l---t~~~ip~FI~lAE~~lnR~LR---~~~mE~~~~l~~~~g--~~~LP~Dfl 68 (208) -++.|-.++...|..= |.+.+ . ||..+-....+++..-..+.| =+.+-+..+++...| ...||+||. T Consensus 1 ~~~~t~lsiin~v~~~i~L~~~~~a~v~sstD~~~~~l~ala~~~g~eia~~~dW~~l~~~~~~t~~~~~~~y~lP~D~~ 80 (242) T protein:vir:35 1 MAWDTAASIINDAAVELGLLATDVADPYASADVNLVQLCRLLKSLGQDMVRDYQWTHLQQQWTFATQVGLANYEMPPDYN 80 (242) T ss_pred CchHHHHHHHHHHHHHhcccCCccccccccchHHHHHHHHHHHHHHHHHHHhcCCcchheeeeecccccCCCCCcchhhH Confidence 3455556666655555 44444 1 344556667777776666665 345556666655444 467999999 Q ss_pred hHhhhhccCCCccee-eeecCHHHHhhhh-ccccCCCCceEEEEEcCeEEEeeecCCCceEEEEeeccCCCCCCCCc--c Q lcl|Aclame:pro 69 ALRSITGDALIGGRT-LQYITQDIFSHYV-NYNYQPQGVTYYTRLGNFWRVYPVVPDGAPFIVNYWTVLPELSLDNP--T 144 (208) Q Consensus 69 e~r~i~~~~~~~~~~-l~~~~~~~~~~~~-~~~~~~~~~~~f~i~g~~i~~~P~p~~~~~~~l~Yy~~iP~LS~~n~--t 144 (208) .+..-+.-...-.++ ..+++++.-+.++ .+.+.+ .+.+|.|.|++|.|+|.|..+....+.|+.+-.-.+.... . T Consensus 81 R~v~~~~w~rt~~~p~~gP~s~~~W~~l~~~~sa~~-~~~~~ri~ggqi~~~P~paa~~~~~f~YiSknWv~~~~~~~k~ 159 (242) T protein:vir:35 81 RFVDQTGWNRTQRMPLLGPLSAQGWQLLQVLTSAGT-VDVMYRLVGGEFVLHPTPESVADIAYEYVSSHWVGTGGSETPN 159 (242) T ss_pred HhhcCcccceeecceecCCcChhhhhhhhhhccCCC-CCceEEEEcCEEEeecCcccccceeEeeecCccccCCCCcccc Confidence 987432222111122 2334444444443 222222 2357999999999999999999999999999985555333 4 Q ss_pred cHHHHhc------hHHHHHHHHHHHHHhhcChhHHHH--HHHHHHHHHHHHHHhhhhHHhcCCc-eee-CCCCC Q lcl|Aclame:pro 145 TWALTKY------PQIYLYGVLEQIYLYTMDEERSMF--WGQKLERAVMELQNEENAADFASSR-LAI-KDIER 208 (208) Q Consensus 145 NWLL~~~------PdiYLyg~l~ea~~~~~d~er~~~--w~~~~~~al~~l~~~d~~~r~~~s~-l~v-~~~t~ 208 (208) +|--+.. |+=.|=-.| +-.|.+. .+..+ -...|+.++..... +=.|++ |.+ +++-+ T Consensus 160 ~~t~~ad~Dt~~l~erLL~LGl--IWRWkra-KGldy~e~l~~YE~aL~~~~~-----~d~G~~~l~l~~~~~~ 225 (242) T protein:vir:35 160 ADAPESGGDTLFFDRRLLVCGL--KLRWQRA-KGFDSTACQDDYDKALERAQG-----GDGAAPVLSLNRRPFA 225 (242) T ss_pred ccccccCCCceechHHHHhHhH--HHHHHhh-cCCCHHHHHHHHHHHHHHHHh-----hcCCCceecCCCCccC Confidence 6885554 443333333 2344321 22222 12334444444333 223332 333 11111 No 7 >protein:vir:5111 Length: 234 # NCBI annotation: unknown # Family: family:all:1423 # MgeID: mge:114 # MgeName: PBC5 # Cross-refs: genbank:acc:NP_542268;genbank:gi:18071240;genbank:GeneID:929347 Probab=97.29 E-value=3.1e-05 Score=45.32 Aligned_cols=192 Identities=15% Similarity=0.100 Sum_probs=114.6 Q ss_pred CCCccCHHHHHHHHHHHhcccCc---chhhhHHHHHHHHHHHHhhhcccccceEEEEEeeCce-eecChh-----HHhHh Q lcl|Aclame:pro 1 MATINNVTDLAIAAIQWSDRQDL---TQELLMLFIGNTTDRLNRLLRVRENEHFETLMAFGGG-IEIPEH-----FVALR 71 (208) Q Consensus 1 m~ai~~Y~~L~~av~~w~~R~Dl---t~~~ip~FI~lAE~~lnR~LR~~~mE~~~~l~~~~g~-~~LP~D-----fle~r 71 (208) |. |-++|..-+..=++=.+- ++.-+-+|++=|-..+= +.|=.--.+..+|.+..|+ ..||.| =++++ T Consensus 1 m~---t~~~lI~r~~~~l~D~~~~rW~~~el~~~lNdAv~e~~-l~rp~a~~~~~~i~l~~Gt~q~lP~d~~~~~~l~li 76 (234) T protein:vir:51 1 MP---KASEIMRLAGIQLLDEDHIRWPLIELADWVNEGVKAIV-LAKPSASSKSAAIQLVKGTHQTLPGTIDGKATLQLI 76 (234) T ss_pred Cc---cHHHHHHHHHHHhccccccccChHHHHHHHHHHHHHHH-hhcCCCCccceeEeeccCCccccccccccchheehh Confidence 65 567777777665543221 11223477776655553 2222334556888888884 999987 36766 Q ss_pred hhhc---c---CCCcceeeeecCHHHHhhh----hccccCCCC--ceEEEE--Ec-CeEEEeeecCCCceEEEEeeccCC Q lcl|Aclame:pro 72 SITG---D---ALIGGRTLQYITQDIFSHY----VNYNYQPQG--VTYYTR--LG-NFWRVYPVVPDGAPFIVNYWTVLP 136 (208) Q Consensus 72 ~i~~---~---~~~~~~~l~~~~~~~~~~~----~~~~~~~~~--~~~f~i--~g-~~i~~~P~p~~~~~~~l~Yy~~iP 136 (208) .|.- + .+..|+.+..++.+.++.. +..++.|.- +..|+- .+ ..++++|.|+.+..|++.||...+ T Consensus 77 ~i~rn~~s~~~~~~~grav~~vsre~LD~~~P~W~~~tg~P~~~~v~~y~~d~~~p~~~~l~P~p~~~g~v~~~~~r~P~ 156 (234) T protein:vir:51 77 GINRNLVSAAEPRQGLRAIRTCARDVLDAQEPNWHTASYVPFRKEVRQVIYDENLPTEFYVYPGNDGSGFVEAAFSFLPT 156 (234) T ss_pred hhhhhhccccccccCcceeeecCHHHhcccCCCccccCCCCchhhhhhhhccCCCCeEEEEeccCCCCceEEEEEEeecc Confidence 6652 1 1235789999999999864 222222210 112322 22 358899999999999999998877 Q ss_pred CC-----CCCC-cccH-----HHHhchHHHHHHHHHHHHHhhc-----ChhHHHHHHHHHHHHHHHHHHhhhhHHhcCCc Q lcl|Aclame:pro 137 EL-----SLDN-PTTW-----ALTKYPQIYLYGVLEQIYLYTM-----DEERSMFWGQKLERAVMELQNEENAADFASSR 200 (208) Q Consensus 137 ~L-----S~~n-~tNW-----LL~~~PdiYLyg~l~ea~~~~~-----d~er~~~w~~~~~~al~~l~~~d~~~r~~~s~ 200 (208) ++ ++.. -.+| |=+.|=...+.=+|+-| |-| |.+|++...|.|+++++.=+..|... T Consensus 157 ~v~~~~~~d~~~~a~~~~~~~i~~~y~~~Lvdw~lyRa--~skD~e~~d~~rA~~h~q~F~~~lG~k~~~d~~~------ 228 (234) T protein:vir:51 157 SVKVANGADPEKIASWDIDVGLPEPYSVPLLDYVLYRC--HQKDDTAADLGKATSHYQLFATAVGIKVQSEGTS------ 228 (234) T ss_pred hhhhhhcCCccccccccccCCccchhhHHHHHHHhhhh--cCccccccchHHHHHHHHHHHHHhCCcchhhhhc------ Confidence 65 3322 2344 44445455555555555 335 55699999999999998655554211 Q ss_pred eeeCCCCC Q lcl|Aclame:pro 201 LAIKDIER 208 (208) Q Consensus 201 l~v~~~t~ 208 (208) .+++ T Consensus 229 ----~pn~ 232 (234) T protein:vir:51 229 ----NPNR 232 (234) T ss_pred ----cccc Confidence 1111 No 8 >protein:vir:93692 Length: 197 # NCBI annotation: Bcep22gp58 # Family: family:all:1423 # MgeID: mge:1470 # MgeName: Bcep22 # Cross-refs: genbank:acc:NP_944287;genbank:gi:38640364;genbank:GeneID:2658345 Probab=94.13 E-value=0.0053 Score=33.06 Aligned_cols=178 Identities=16% Similarity=0.176 Sum_probs=105.8 Q ss_pred CCCccCHHHHHHHHHHHhcccCc---chhhhHHHHHHHHHHHHhhhcccccce-EEEEEeeCce-eecChhHHhHhhhhc Q lcl|Aclame:pro 1 MATINNVTDLAIAAIQWSDRQDL---TQELLMLFIGNTTDRLNRLLRVRENEH-FETLMAFGGG-IEIPEHFVALRSITG 75 (208) Q Consensus 1 m~ai~~Y~~L~~av~~w~~R~Dl---t~~~ip~FI~lAE~~lnR~LR~~~mE~-~~~l~~~~g~-~~LP~Dfle~r~i~~ 75 (208) |+ + |-++|..-++.=+.=.+- ++.-.-+|++=|-..+ .||-|..-. ..+|.+..|+ .+||.|.+.++.+.- T Consensus 1 M~-~-t~~~lI~r~~~~L~D~~~~rW~~~el~dwlNdAv~ei--~l~rPda~~~~~~i~l~aGt~q~LP~~~~~Li~vvr 76 (197) T protein:vir:93 1 MP-I-AATDLIARAGNVLQDEDHIRWEVPELIEWINDAARET--IVRRPAARSVAAVLELAAGTRQAIPERGVELLDVVR 76 (197) T ss_pred Cc-c-cHHHHHHHHHHhhccccccccCcHHHHHHHHHHHHHH--HhhCCCCCcceeEEeeccCcccccchhHHHHHHHHH Confidence 65 2 467777766655543221 1122347777776666 566455433 4667777776 899999999887763 Q ss_pred ---c-CCCcceeeeecCHHHHhhh----hccccCCCCceE-EEEEc-CeEEEeeecCCCceEEEEeeccCCCCCCCCccc Q lcl|Aclame:pro 76 ---D-ALIGGRTLQYITQDIFSHY----VNYNYQPQGVTY-YTRLG-NFWRVYPVVPDGAPFIVNYWTVLPELSLDNPTT 145 (208) Q Consensus 76 ---~-~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~-f~i~g-~~i~~~P~p~~~~~~~l~Yy~~iP~LS~~n~tN 145 (208) + ....|+.+..++.|.+... ++...++....| |...+ ..++++|.|+.+..|++.||...+++....+.- T Consensus 77 n~~~~~~~~gr~vr~vsre~LD~~~P~W~~~~~~~~v~~y~~~e~~p~~~~vyP~p~~~~~ve~~~~r~P~~v~~~~~~~ 156 (197) T protein:vir:93 77 NMGADGVTPGRIVRRVDRQLLDDQNPDWHAARAKNVVKHFTFDERAPRIFYVYPPAVAGTKVETLHSELPPAIAASGDTL 156 (197) T ss_pred hhhhcccCCCcccccccHHHhcccCCCCccCCCCCceEEEEeecCCCcEEEEeecCCCCceEEEEEeeCChhhhccCCCC Confidence 1 2235789999999998863 322333333333 55555 468999999999999999998887676666655 Q ss_pred HHHHhchHHHHHHHHH-HHH--HhhcChhHHHHHHHHHHHHHHHHHHhhhhHHhcCCceeeCCCCC Q lcl|Aclame:pro 146 WALTKYPQIYLYGVLE-QIY--LYTMDEERSMFWGQKLERAVMELQNEENAADFASSRLAIKDIER 208 (208) Q Consensus 146 WLL~~~PdiYLyg~l~-ea~--~~~~d~er~~~w~~~~~~al~~l~~~d~~~r~~~s~l~v~~~t~ 208 (208) ++ |++|.=..+. +++ -|-||++. --...+-+|+--.- T Consensus 157 ~i----peiy~~~lv~~~~lyRa~sKd~~~----------------------~a~a~~~~~~~~~~ 196 (197) T protein:vir:93 157 DM----GAEYMNVLVSTSATARCRRTASSR----------------------TARSPPCTIRRSST 196 (197) T ss_pred CC----chhhhhhhHHhhhhhhhcCCCCCC----------------------cccCCccccccCCC Confidence 63 6776633333 221 24555442 11112222221111 No 9 >protein:vir:9964 Length: 223 # NCBI annotation: hypothetical protein # Family: family:all:2410 # MgeID: mge:179 # MgeName: Stx1 converting bacteriophage # Cross-refs: genbank:acc:NP_859094;genbank:gi:32170849;genbank:GeneID:2653173 Probab=93.03 E-value=0.0091 Score=31.78 Aligned_cols=175 Identities=14% Similarity=0.087 Sum_probs=105.6 Q ss_pred CCCccCHHHHHHHHHHHhcccCcchhhhHHHHHHHHHHHHhhhcccccceEEEEEe-eCce---eecChhHHhHhhhhcc Q lcl|Aclame:pro 1 MATINNVTDLAIAAIQWSDRQDLTQELLMLFIGNTTDRLNRLLRVRENEHFETLMA-FGGG---IEIPEHFVALRSITGD 76 (208) Q Consensus 1 m~ai~~Y~~L~~av~~w~~R~Dlt~~~ip~FI~lAE~~lnR~LR~~~mE~~~~l~~-~~g~---~~LP~Dfle~r~i~~~ 76 (208) |-..++.++++-.|..++.--= +..+-+.|..|--+|=|.-++-. .+.++.. .++. +..|+|= ++.+|-.- T Consensus 34 ~~~Mv~~d~fLP~Vr~~vp~~l--~~~~~~aLr~AAieFCReS~~~R--~t~~~~~~~~~~~~~~~~~~~~-~~~rI~~v 108 (223) T protein:vir:99 34 LNSMAELSDFLPYVRRHISGPL--NIMMTDALSMAAVAFSRQSLVCR--REVTVVPVAGKEIVLPYDKDDE-ECVHIIRI 108 (223) T ss_pred HhhhccHHHHHHHHhhhCCCch--hHHHHHHHHHHHHHHHhhcccee--ecccccCCCCcceEEeeccccc-cceeeEEe Confidence 7777777889988887776521 13566788888888877765442 2333322 2222 2233331 22222111 Q ss_pred CCCcceeeeecCHHHHhhhhccccCCCCceEEEEEc-CeEEEeeecCCCceEEEEeeccCCCCCC-CCcccHHHHhchHH Q lcl|Aclame:pro 77 ALIGGRTLQYITQDIFSHYVNYNYQPQGVTYYTRLG-NFWRVYPVVPDGAPFIVNYWTVLPELSL-DNPTTWALTKYPQI 154 (208) Q Consensus 77 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~i~g-~~i~~~P~p~~~~~~~l~Yy~~iP~LS~-~n~tNWLL~~~Pdi 154 (208) ...|++|.. + ..|++.+ +.++|.|.| + +++| +++--|.... +-| --|++ ++|+ T Consensus 109 -~~~g~~L~~---------------G---~~~t~~s~d~l~l~~~~--~-tl~V-~~alkPs~~a~~lP-D~L~d-y~ea 163 (223) T protein:vir:99 109 -SDDNHELFV---------------G---RDVDISSGRSLRFACSP--G-EVSV-LYAVAPKAGRSQIP-DELLT-WPEE 163 (223) T ss_pred -ecCCeeeec---------------c---cceeecCCceEEEEeCC--C-eEEE-EEEeccCcchhhhh-HHHHH-HHHH Confidence 112444441 1 2266666 899999966 3 4787 4455555544 334 45555 9999 Q ss_pred HHHHHHHHHHHhh----cChhHHHHHHHHHHHHHHHHHHhhhhHHhcCCceeeCCCCC Q lcl|Aclame:pro 155 YLYGVLEQIYLYT----MDEERSMFWGQKLERAVMELQNEENAADFASSRLAIKDIER 208 (208) Q Consensus 155 YLyg~l~ea~~~~----~d~er~~~w~~~~~~al~~l~~~d~~~r~~~s~l~v~~~t~ 208 (208) .=+|++.+..+== .|++++++|.++|.+++.+-.... +=.+..-.-+++.| T Consensus 164 I~~GA~arLlmmP~kpWsNP~lA~y~~~~F~eg~r~Akr~a---le~~~~~~~~nP~R 218 (223) T protein:vir:99 164 VAAGALERLFMQTGVSWSDPLRAQYFSVQFSEGIRRAYRHT---LATSPYSSYRNPVR 218 (223) T ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHHHHHHH---HhhcCccccCCCcc Confidence 9999998876544 499999999999988776655433 22333344567777 No 10 >protein:vir:10130 Length: 223 # NCBI annotation: hypothetical protein # Family: family:all:2410 # MgeID: mge:180 # MgeName: Stx2 converting bacteriophage II # Cross-refs: genbank:acc:NP_859260;genbank:gi:32171016;genbank:GeneID:2653415 Probab=93.03 E-value=0.0091 Score=31.78 Aligned_cols=175 Identities=14% Similarity=0.087 Sum_probs=105.6 Q ss_pred CCCccCHHHHHHHHHHHhcccCcchhhhHHHHHHHHHHHHhhhcccccceEEEEEe-eCce---eecChhHHhHhhhhcc Q lcl|Aclame:pro 1 MATINNVTDLAIAAIQWSDRQDLTQELLMLFIGNTTDRLNRLLRVRENEHFETLMA-FGGG---IEIPEHFVALRSITGD 76 (208) Q Consensus 1 m~ai~~Y~~L~~av~~w~~R~Dlt~~~ip~FI~lAE~~lnR~LR~~~mE~~~~l~~-~~g~---~~LP~Dfle~r~i~~~ 76 (208) |-..++.++++-.|..++.--= +..+-+.|..|--+|=|.-++-. .+.++.. .++. +..|+|= ++.+|-.- T Consensus 34 ~~~Mv~~d~fLP~Vr~~vp~~l--~~~~~~aLr~AAieFCReS~~~R--~t~~~~~~~~~~~~~~~~~~~~-~~~rI~~v 108 (223) T protein:vir:10 34 LNSMAELSDFLPYVRRHISGPL--NIMMTDALSMAAVAFSRQSLVCR--REVTVVPVAGKEIVLPYDKDDE-ECVHIIRI 108 (223) T ss_pred HhhhccHHHHHHHHhhhCCCch--hHHHHHHHHHHHHHHHhhcccee--ecccccCCCCcceEEeeccccc-cceeeEEe Confidence 7777777889988887776521 13566788888888877765442 2333322 2222 2233331 22222111 Q ss_pred CCCcceeeeecCHHHHhhhhccccCCCCceEEEEEc-CeEEEeeecCCCceEEEEeeccCCCCCC-CCcccHHHHhchHH Q lcl|Aclame:pro 77 ALIGGRTLQYITQDIFSHYVNYNYQPQGVTYYTRLG-NFWRVYPVVPDGAPFIVNYWTVLPELSL-DNPTTWALTKYPQI 154 (208) Q Consensus 77 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~i~g-~~i~~~P~p~~~~~~~l~Yy~~iP~LS~-~n~tNWLL~~~Pdi 154 (208) ...|++|.. + ..|++.+ +.++|.|.| + +++| +++--|.... +-| --|++ ++|+ T Consensus 109 -~~~g~~L~~---------------G---~~~t~~s~d~l~l~~~~--~-tl~V-~~alkPs~~a~~lP-D~L~d-y~ea 163 (223) T protein:vir:10 109 -SDDNHELFV---------------G---RDVDISSGRSLRFACSP--G-EVSV-LYAVAPKAGRSQIP-DELLT-WPEE 163 (223) T ss_pred -ecCCeeeec---------------c---cceeecCCceEEEEeCC--C-eEEE-EEEeccCcchhhhh-HHHHH-HHHH Confidence 112444441 1 2266666 899999966 3 4787 4455555544 334 45555 9999 Q ss_pred HHHHHHHHHHHhh----cChhHHHHHHHHHHHHHHHHHHhhhhHHhcCCceeeCCCCC Q lcl|Aclame:pro 155 YLYGVLEQIYLYT----MDEERSMFWGQKLERAVMELQNEENAADFASSRLAIKDIER 208 (208) Q Consensus 155 YLyg~l~ea~~~~----~d~er~~~w~~~~~~al~~l~~~d~~~r~~~s~l~v~~~t~ 208 (208) .=+|++.+..+== .|++++++|.++|.+++.+-.... +=.+..-.-+++.| T Consensus 164 I~~GA~arLlmmP~kpWsNP~lA~y~~~~F~eg~r~Akr~a---le~~~~~~~~nP~R 218 (223) T protein:vir:10 164 VAAGALERLFMQTGVSWSDPLRAQYFSVQFSEGIRRAYRHT---LATSPYSSYRNPVR 218 (223) T ss_pred HHHHHHHHHHhCCCCCCCChhHHHHHHHHHHHHHHHHHHHH---HhhcCccccCCCcc Confidence 9999998876544 499999999999988776655433 22333344567777 No 11 >protein:vir:104383 Length: 166 # NCBI annotation: hypothetical protein # Family: family:all:2410 # MgeID: mge:1471 # MgeName: 86 # Cross-refs: genbank:acc:YP_794066;genbank:gi:116222011;genbank:GeneID:4397445 Probab=91.09 E-value=0.018 Score=30.21 Aligned_cols=154 Identities=15% Similarity=0.097 Sum_probs=91.6 Q ss_pred hhHHHHHHHHHHHHhhhcccccceEEEEEeeCceeecC--hhHHhHhhhhccCCCcceeeeecCHHHHhhhhccccCCCC Q lcl|Aclame:pro 27 LLMLFIGNTTDRLNRLLRVRENEHFETLMAFGGGIEIP--EHFVALRSITGDALIGGRTLQYITQDIFSHYVNYNYQPQG 104 (208) Q Consensus 27 ~ip~FI~lAE~~lnR~LR~~~mE~~~~l~~~~g~~~LP--~Dfle~r~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 104 (208) +|.+=|..|--+|=|.-.+-.-+.++..+...+.+..+ +|.-..+-+.... .++.|. + | T Consensus 1 ~m~~Al~~AaieFCreS~~~r~t~t~~~~~~~~~v~~~~~~d~~~~~i~~v~~--~~~~L~----------------~-g 61 (166) T protein:vir:10 1 MMTDALSMAAVAFSRQSLVCRREVTVVPVAGKEIVLPYDKDDEECVHIIRISD--DNHELF----------------V-G 61 (166) T ss_pred ChHHHHHHHHHHHHhhccceeeeecccccCCcceEEecCCccceeeeEEeeec--CCceee----------------c-c Confidence 56666666766776665444444443333333333322 2222221111111 122322 1 1 Q ss_pred ceEEEEEc-CeEEEeeecCCCceEEEEeeccCCCCCCCCcccHHHHhchHHHHHHHHHHHHHhh----cChhHHHHHHHH Q lcl|Aclame:pro 105 VTYYTRLG-NFWRVYPVVPDGAPFIVNYWTVLPELSLDNPTTWALTKYPQIYLYGVLEQIYLYT----MDEERSMFWGQK 179 (208) Q Consensus 105 ~~~f~i~g-~~i~~~P~p~~~~~~~l~Yy~~iP~LS~~n~tNWLL~~~PdiYLyg~l~ea~~~~----~d~er~~~w~~~ 179 (208) .+|++.+ ++|+|.|.| + +|++ +++.-|..+...-.--|++ ++|+.-+|++....+== .|++++++..++ T Consensus 62 -~~~~~~s~~~L~~~~~~--~-~l~V-~~a~~Ps~~a~~lPd~L~d-y~~aI~~GA~~~L~mmP~k~WsnP~la~y~~~~ 135 (166) T protein:vir:10 62 -RDVDISSGRSLRFACSP--G-EVSV-LYAVAPKAGRSQIPDELLT-WPEEVAAGALERLFMQTGVSWSDPLRAQYFSVQ 135 (166) T ss_pred -ccceecCCcEEEEecCC--C-EEEE-EEEeccCCCCcccchHHhh-HHHHHHHHHHHHHHhCCCCCCCChhhhHHHHHH Confidence 2467766 899999987 3 4888 5666677766555567775 99999999999887644 599999999999 Q ss_pred HHHHHHHHHHhhhhHHhcCCceeeCCCCC Q lcl|Aclame:pro 180 LERAVMELQNEENAADFASSRLAIKDIER 208 (208) Q Consensus 180 ~~~al~~l~~~d~~~r~~~s~l~v~~~t~ 208 (208) |.+++.+-.. .++=.+..-.-+++.| T Consensus 136 F~eg~r~A~r---~a~e~~~~~~~~nP~R 161 (166) T protein:vir:10 136 FSEGIRRAYR---HTLATSPYSSYRNPAR 161 (166) T ss_pred HHHHHHHHHH---HhhhhcCccccCCCcc Confidence 9877755444 2333333334467777 No 12 >protein:vir:105646 Length: 245 # NCBI annotation: putative tail tubular A protein # Family: family:all:824 # MgeID: mge:1674 # MgeName: K1E # Cross-refs: genbank:acc:YP_425010;genbank:gi:83571758;uniprot:Q2WC42;genbank:GeneID:3837287 Probab=65.33 E-value=0.29 Score=23.57 Aligned_cols=183 Identities=11% Similarity=0.074 Sum_probs=104.0 Q ss_pred CCCccCHH---HHHHHHHHHh---cccCcch----hhhHHHHHHHHHHHHhhhcc-c------ccceEEEEE-eeCceee Q lcl|Aclame:pro 1 MATINNVT---DLAIAAIQWS---DRQDLTQ----ELLMLFIGNTTDRLNRLLRV-R------ENEHFETLM-AFGGGIE 62 (208) Q Consensus 1 m~ai~~Y~---~L~~av~~w~---~R~Dlt~----~~ip~FI~lAE~~lnR~LR~-~------~mE~~~~l~-~~~g~~~ 62 (208) |-+-.+|+ .-+.||..=| +.+=++. +.-.-++..|-.-+|++.|- - --|...+|+ -.+|.+. T Consensus 13 ~~~~~~~~~~~TeLdAVN~~L~aIGEsPV~sld~~~~~~~~va~al~~l~~~~r~vqseGW~FNte~~~~ltPD~~g~I~ 92 (245) T protein:vir:10 13 MMEDVAFQIIDSKLEAVNLCMRAIGREGVDSLDSGDLDAEDASKMIDIVSQRFQYNKGGGWWFNREPNWQIAPDTNGEVN 92 (245) T ss_pred hhhhhhhhhhhhhHHHHHHHHHhhCccccceecCCCcchHHHHHHHHHHHHHHHHHccCCeeEeecCCeeeccCCCCeEe Confidence 33444665 3455555444 3332221 11135677777777776541 0 113344443 2469999 Q ss_pred cChhHHhHhhhhccCCCcceeeeecCHHHHhhhhccccCCCCceEEEEEcCeEEEe-eecCC-CceEEEEeeccCCCCCC Q lcl|Aclame:pro 63 IPEHFVALRSITGDALIGGRTLQYITQDIFSHYVNYNYQPQGVTYYTRLGNFWRVY-PVVPD-GAPFIVNYWTVLPELSL 140 (208) Q Consensus 63 LP~Dfle~r~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~i~g~~i~~~-P~p~~-~~~~~l~Yy~~iP~LS~ 140 (208) +|.|+|++-... +.+.+....+ . +|.+-|-+...+..|. |.... .-.+.|+|.-.|..|-. T Consensus 93 iP~n~L~v~~~~---~~~~~~~~~v---------~-----RggrLYD~~nhT~~F~~pi~~~~~~~v~Iv~~~pFEdLPe 155 (245) T protein:vir:10 93 LPNNCLAVLQCY---ALGEKKVPMT---------M-----RAGKLYSTWSHTFDMRKHVNANGMIRLTLLTLLPYEHLPT 155 (245) T ss_pred cCccceeeeccC---ccccccceeE---------e-----ccceEEeccccceecccccccCcceEEEEEeeCChhhhhH Confidence 999999654432 1111222211 1 1224577777776665 22211 22467888888877755 Q ss_pred CCcccHHHHhchHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhhHHh----------------cCCceeeC Q lcl|Aclame:pro 141 DNPTTWALTKYPQIYLYGVLEQIYLYTMDEERSMFWGQKLERAVMELQNEENAADF----------------ASSRLAIK 204 (208) Q Consensus 141 ~n~tNWLL~~~PdiYLyg~l~ea~~~~~d~er~~~w~~~~~~al~~l~~~d~~~r~----------------~~s~l~v~ 204 (208) .. ..|+-. -++....-.+..+++..+.+++..++|...+.+..-+.+- .|++-.++ T Consensus 156 ~~-q~yI~~-------rAA~~f~~~~~G~~~~~q~l~qee~~a~~~l~e~e~~q~~~Nml~~~~~~r~~r~m~~~~~~~~ 227 (245) T protein:vir:10 156 SV-MQAIAY-------QAAVEFIVSKDADQTKLATAQQIATQLLMDVQSEQMSQKRLNMLVHNPTQRQFGIMAGGSQNVP 227 (245) T ss_pred HH-HHHHHH-------HHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHHHHhhCCcceeeCchhhhhhhhhhccccccc Confidence 54 355543 4577777888899999999999999999999886554332 22333333 Q ss_pred CCCC Q lcl|Aclame:pro 205 DIER 208 (208) Q Consensus 205 ~~t~ 208 (208) ...| T Consensus 228 ~~~~ 231 (245) T protein:vir:10 228 AYSH 231 (245) T ss_pred cccc Confidence 3333 No 13 >protein:vir:7020 Length: 246 # NCBI annotation: tail protein # Family: family:all:824 # MgeID: mge:141 # MgeName: SP6 # Cross-refs: genbank:acc:NP_853593;genbank:gi:31711675;genbank:GeneID:1481801 Probab=64.44 E-value=0.3 Score=23.45 Aligned_cols=183 Identities=11% Similarity=0.115 Sum_probs=101.9 Q ss_pred CC--CccCHHHHHHHHHHH---hcccCcch----hhhHHHHHHHHHHHHhhhcc-c------ccceEEEEE-eeCceeec Q lcl|Aclame:pro 1 MA--TINNVTDLAIAAIQW---SDRQDLTQ----ELLMLFIGNTTDRLNRLLRV-R------ENEHFETLM-AFGGGIEI 63 (208) Q Consensus 1 m~--ai~~Y~~L~~av~~w---~~R~Dlt~----~~ip~FI~lAE~~lnR~LR~-~------~mE~~~~l~-~~~g~~~L 63 (208) |+ .|++-..-+.||..= ++.+=++. +.---++..+=..+||.++- - --|...+|+ -.+|.+.+ T Consensus 14 ~~~~~~~~~~TeLdAVN~~L~aIGEsPV~sld~~n~d~~~a~~iL~~v~~~vq~~lseGW~FNte~~~~ltPD~~g~I~i 93 (246) T protein:vir:70 14 MSDASFSIIDSKLEAVNLCMRAIGREGVDSLDSGDLDAEDASKMLDIVSQRFQYNKGGGWWFNREPNWRIVPDTNGEVNL 93 (246) T ss_pred eeccccccchhhHHHHHHHHHhhCccccccccCCCccHHHHHHHHHHHHHHHHHhccCCeeEeecCceeeccCCCCeEec Confidence 22 233333344444443 33332221 11124677777788887750 0 113344454 24699999 Q ss_pred ChhHHhHhhhhccCCCcceeeeecCHHHHhhhhccccCCCCceEEEEEcCeEEEeee--cCCCceEEEEeeccCCCCCCC Q lcl|Aclame:pro 64 PEHFVALRSITGDALIGGRTLQYITQDIFSHYVNYNYQPQGVTYYTRLGNFWRVYPV--VPDGAPFIVNYWTVLPELSLD 141 (208) Q Consensus 64 P~Dfle~r~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~i~g~~i~~~P~--p~~~~~~~l~Yy~~iP~LS~~ 141 (208) |.|+|++-..-. ..++.... .+ +|.+-|-+...+..|.-. -++.=.++|+|.-.|..|-.. T Consensus 94 P~n~L~v~~~~~---~~~~~~~v---------v~-----RGgkLYD~~n~T~~F~~~~~~D~pv~v~IV~~~~FedLPe~ 156 (246) T protein:vir:70 94 PNNCLAVLQCYA---LGERKVPM---------TM-----RAGKLYSTWNHTFDMRSHVNKDGAIRLTLLTYLPFEHLPTS 156 (246) T ss_pred CccceeeeeccC---cccCceee---------EE-----cCCeeEeecccceecccccccCcceEEEEEecCChhhhhHH Confidence 999998754421 11112211 11 122557777777777411 011124788888888888665 Q ss_pred CcccHHHHhchHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhhHHh----------------cCCceeeCC Q lcl|Aclame:pro 142 NPTTWALTKYPQIYLYGVLEQIYLYTMDEERSMFWGQKLERAVMELQNEENAADF----------------ASSRLAIKD 205 (208) Q Consensus 142 n~tNWLL~~~PdiYLyg~l~ea~~~~~d~er~~~w~~~~~~al~~l~~~d~~~r~----------------~~s~l~v~~ 205 (208) . ..|+-.+ ++...+-.+.-|++..+.+++.-++|...+.+..-+.+- -|++-.++. T Consensus 157 ~-q~yI~~r-------AA~~f~~~~~gd~~~~~~~~~~e~~a~~~~~~~e~~q~~~Nml~~~~~~r~~r~m~~~~~~~~~ 228 (246) T protein:vir:70 157 V-MQAIAYQ-------AAVEFIVSKDADKTKLTTHQQIAAQLFVDVQSEQMSQKRLNMLVHNPTQRQFGIMAGGSQNVPA 228 (246) T ss_pred H-HHHHHHH-------HHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHhhCCcceeeCchhhhhhhhhhcccccccc Confidence 5 3676655 445566688889999999999889998888876544322 223333444 Q ss_pred CCC Q lcl|Aclame:pro 206 IER 208 (208) Q Consensus 206 ~t~ 208 (208) ..| T Consensus 229 ~~~ 231 (246) T protein:vir:70 229 YSH 231 (246) T ss_pred ccc Confidence 444 No 14 >protein:vir:1542 Length: 196 # NCBI annotation: tail tubular protein A # Family: family:all:824 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052110;swissprot:trembl:q9t106;genbank:gi:9634036;uniprot:Q9T106;genbank:GeneID:1262371 Probab=59.14 E-value=0.4 Score=22.77 Aligned_cols=174 Identities=15% Similarity=0.112 Sum_probs=104.6 Q ss_pred CCCccCHHHHHHHHHHHh---ccc-----CcchhhhHHHHHHHHHHHHhhhccc----ccceEEEEEe--eCceeecChh Q lcl|Aclame:pro 1 MATINNVTDLAIAAIQWS---DRQ-----DLTQELLMLFIGNTTDRLNRLLRVR----ENEHFETLMA--FGGGIEIPEH 66 (208) Q Consensus 1 m~ai~~Y~~L~~av~~w~---~R~-----Dlt~~~ip~FI~lAE~~lnR~LR~~----~mE~~~~l~~--~~g~~~LP~D 66 (208) =..|.. ..-+.||..=| +.+ |.+.+.-=.++..+=.+.||.+--. --|...+|+. .+|.+.+|.| T Consensus 5 ~~~~~~-~teLdAVN~~L~aIGEspV~sld~~~npdva~a~~iL~~v~~~vqseGW~FNte~~~~ltPD~~~g~I~vP~n 83 (196) T protein:vir:15 5 EMNIET-AEELSAVNDILASIGEPPVSTLEGDANADVANARRVLNKINRQIQSRGWTFNIEEGVTLLPDAFSGMIPFSSD 83 (196) T ss_pred ccchhh-hhhhHHHHHHHHhcCccccccccCCCCccHHHHHHHHHHHHHHHhhCCceEeecCCceeeecCCCCeEecCcc Confidence 122322 33333443333 222 2221222245555555556555311 1255566665 4799999999 Q ss_pred HHhHhhhhccCCCcceeeeecCHHHHhhhhccccCCCCceEEEEEcCeEEEeeecCCCceEEEEeeccCCCCCCCCcccH Q lcl|Aclame:pro 67 FVALRSITGDALIGGRTLQYITQDIFSHYVNYNYQPQGVTYYTRLGNFWRVYPVVPDGAPFIVNYWTVLPELSLDNPTTW 146 (208) Q Consensus 67 fle~r~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~i~g~~i~~~P~p~~~~~~~l~Yy~~iP~LS~~n~tNW 146 (208) +|++.... + ...+ ..+ |.+-|-+...+..|. .| -.+.|.+.-.|..|.... ..| T Consensus 84 ~L~v~~~~------~-~~~~---------v~R-----gg~LYD~~n~T~~F~-~p---i~v~iv~~~~FedlPe~~-~~y 137 (196) T protein:vir:15 84 YLSVMATS------G-QTQY---------INR-----GGYLYDRSAKTDRFP-SG---VQVNLIRLREFDEMPECF-RNY 137 (196) T ss_pred eeEEecCC------C-ceeE---------EEc-----CCeEEeccCCcEEeC-Cc---eEEEEEeecChhhhhHHH-HHH Confidence 99966431 1 1111 111 225577777777774 22 358899999998886655 367 Q ss_pred HHHhchHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhh-HHh---cCCceeeCCCCC Q lcl|Aclame:pro 147 ALTKYPQIYLYGVLEQIYLYTMDEERSMFWGQKLERAVMELQNEENA-ADF---ASSRLAIKDIER 208 (208) Q Consensus 147 LL~~~PdiYLyg~l~ea~~~~~d~er~~~w~~~~~~al~~l~~~d~~-~r~---~~s~l~v~~~t~ 208 (208) +-.+ ++....-.+..|++..+.+++..++|-..+.+..-+ .+| .+.+.+-+-++| T Consensus 138 I~~r-------Aa~~f~~~~~G~~~~~q~l~~~e~~a~~~l~~~e~~q~~~Nml~~~~~~~~~~~r 196 (196) T protein:vir:15 138 IVTK-------ASRQFNNRFFGAPEVDGVLQEEEQEAWRACFEYELDYGNYNMLDGDAFTSGLLNR 196 (196) T ss_pred HHHH-------HHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHhhCCcceeecCchhhccccC Confidence 6554 466777788889999999999999999999884433 333 366677777788 No 15 >protein:vir:3365 Length: 196 # NCBI annotation: tail tubular protein A # Family: family:all:824 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523336;swissprot:trembl:q8w5u4;genbank:gi:17570827;uniprot:Q8W5U4;genbank:GeneID:927450 Probab=50.32 E-value=0.61 Score=21.75 Aligned_cols=174 Identities=15% Similarity=0.090 Sum_probs=104.8 Q ss_pred CCCccCHHHHHHHHHHHh---ccc-----CcchhhhHHHHHHHHHHHHhhhccc----ccceEEEEEe--eCceeecChh Q lcl|Aclame:pro 1 MATINNVTDLAIAAIQWS---DRQ-----DLTQELLMLFIGNTTDRLNRLLRVR----ENEHFETLMA--FGGGIEIPEH 66 (208) Q Consensus 1 m~ai~~Y~~L~~av~~w~---~R~-----Dlt~~~ip~FI~lAE~~lnR~LR~~----~mE~~~~l~~--~~g~~~LP~D 66 (208) =..|.. ..-+.||..=| +.+ |.+.+.-=.++..+=.+.||.+--. --|...+|+. .+|.+.+|.| T Consensus 5 ~~~~~~-~teLdAVN~~L~aIGEspV~sld~~~npdva~a~~iL~~v~~~vqseGW~FNte~~~~ltPD~~~g~I~vP~n 83 (196) T protein:vir:33 5 EMNIET-AEELSAVNDILASIGEPPVSTLEGDANADVANARRVLNKINRQIQSRGWTFNIEEGVTLLPDAFSGMIPFSSD 83 (196) T ss_pred ccchhh-hhhhHHHHHHHHhcCccccccccCCCCccHHHHHHHHHHHHHHHhhCCceEeecCceeEeeeCCCCeEecCcc Confidence 122322 33333443333 222 3221222245555555556555311 1244455654 4799999999 Q ss_pred HHhHhhhhccCCCcceeeeecCHHHHhhhhccccCCCCceEEEEEcCeEEEeeecCCCceEEEEeeccCCCCCCCCcccH Q lcl|Aclame:pro 67 FVALRSITGDALIGGRTLQYITQDIFSHYVNYNYQPQGVTYYTRLGNFWRVYPVVPDGAPFIVNYWTVLPELSLDNPTTW 146 (208) Q Consensus 67 fle~r~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~i~g~~i~~~P~p~~~~~~~l~Yy~~iP~LS~~n~tNW 146 (208) +|++.... + ...+ ..+ |.+-|-+...+..|.- | -.+.|.+.-.|..|.... ..| T Consensus 84 ~L~v~~~~------~-~~~~---------v~R-----gg~LYD~~n~T~~F~~-p---i~v~iv~~~~FedlPe~~-~~y 137 (196) T protein:vir:33 84 YLSVMATS------G-QTQY---------VNR-----GGYLYDRSAKTDRFPS-G---VQVNLIRLREFDEMPECF-RNY 137 (196) T ss_pred eeEEecCC------C-ceeE---------EEc-----CCeEEeccCCcEEeCC-c---eEEEEEeecChhhhhHHH-HHH Confidence 99966431 1 1111 111 2245777777777742 2 358899999998886655 356 Q ss_pred HHHhchHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhhHH----hcCCceeeCCCCC Q lcl|Aclame:pro 147 ALTKYPQIYLYGVLEQIYLYTMDEERSMFWGQKLERAVMELQNEENAAD----FASSRLAIKDIER 208 (208) Q Consensus 147 LL~~~PdiYLyg~l~ea~~~~~d~er~~~w~~~~~~al~~l~~~d~~~r----~~~s~l~v~~~t~ 208 (208) +-. -++....-.+..+++..+.+++..++|-..+.+.+-+.+ +.+.+.+-+-++| T Consensus 138 I~~-------rAa~~f~~~~~G~~~~~q~l~~ee~~a~~~~~~~e~~q~~~Nml~~~~~~~~~~~r 196 (196) T protein:vir:33 138 IVT-------KASRQFNNRFFGAPEVDGVLQEEEQEAWSACFEYELDYGNYNMLDGDAFTSGLLNR 196 (196) T ss_pred HHH-------HHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHHHHHhhCCcceeecCchhhccccC Confidence 544 467778888899999999999999999999887665443 3456667777788 No 16 >protein:vir:97033 Length: 245 # NCBI annotation: 32 # Family: family:all:824 # MgeID: mge:1644 # MgeName: K1-5 # Cross-refs: genbank:acc:YP_654133;genbank:gi:108862017;genbank:GeneID:5075982 Probab=48.17 E-value=0.68 Score=21.51 Aligned_cols=183 Identities=12% Similarity=0.076 Sum_probs=103.7 Q ss_pred CCCccCHH---HHHHHHHHHh---cccCcch----hhhHHHHHHHHHHHHhhhcc-c------ccceEEEEE-eeCceee Q lcl|Aclame:pro 1 MATINNVT---DLAIAAIQWS---DRQDLTQ----ELLMLFIGNTTDRLNRLLRV-R------ENEHFETLM-AFGGGIE 62 (208) Q Consensus 1 m~ai~~Y~---~L~~av~~w~---~R~Dlt~----~~ip~FI~lAE~~lnR~LR~-~------~mE~~~~l~-~~~g~~~ 62 (208) |-+-.+|+ .-+.||..=| +.+=++. +.-.-++..|-.-+|++.|- - --|...+|+ -.+|.+. T Consensus 13 ~~~~~~~~~~~TeLdAVN~~L~aIGEsPV~sld~~~~~~~~va~al~~l~~~~r~vqseGW~FNte~~~~ltPD~~g~I~ 92 (245) T protein:vir:97 13 MMEDVAFQIIDSKLEAVNLCMRAIGREGVDSLDSGDLDAEDASKMIDIVSQRFQYNKGGGWWFNREPNWQLAPDTNGEVN 92 (245) T ss_pred hhhhhhhhhhhhhHHHHHHHHHhhCccccceecCCCcchHHHHHHHHHHHHHHHHHccCCeeEeecCCeeeccCCCCeEe Confidence 33334555 3455555444 3332221 11135677777777776541 0 113344444 2469999 Q ss_pred cChhHHhHhhhhccCCCcceeeeecCHHHHhhhhccccCCCCceEEEEEcCeEEEe-eecCC-CceEEEEeeccCCCCCC Q lcl|Aclame:pro 63 IPEHFVALRSITGDALIGGRTLQYITQDIFSHYVNYNYQPQGVTYYTRLGNFWRVY-PVVPD-GAPFIVNYWTVLPELSL 140 (208) Q Consensus 63 LP~Dfle~r~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~i~g~~i~~~-P~p~~-~~~~~l~Yy~~iP~LS~ 140 (208) +|.|+|++-... +.+.+....+ . +|.+-|-....+..|. |.... .-.+.|+|.-.|..|-. T Consensus 93 iP~n~L~v~~~~---~~~~~~~~~v---------~-----RggrLYD~~nhT~~F~~pi~~~~~~~v~Iv~~~pFEdLPe 155 (245) T protein:vir:97 93 LPNNCLAVLQCY---ALGEKKVPMT---------M-----RAGKLYSTWSHTFDMRKHVNANGMIRLTLLTLLPYEHLPT 155 (245) T ss_pred cCccceeeeccC---ccccccceeE---------e-----ccceEEeccccceecccccccCcceEEEEEeeCChhhhhH Confidence 999999654432 1111222211 1 1225577777776665 22211 22467888888877755 Q ss_pred CCcccHHHHhchHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhhHHh----------------cCCceeeC Q lcl|Aclame:pro 141 DNPTTWALTKYPQIYLYGVLEQIYLYTMDEERSMFWGQKLERAVMELQNEENAADF----------------ASSRLAIK 204 (208) Q Consensus 141 ~n~tNWLL~~~PdiYLyg~l~ea~~~~~d~er~~~w~~~~~~al~~l~~~d~~~r~----------------~~s~l~v~ 204 (208) .. ..|+-. -++....-.+..+++..+.+++..++|...+.+..-+.+- .|++-.++ T Consensus 156 ~~-q~yI~~-------rAA~~f~~~~~G~~~~~q~l~qee~~a~~~l~e~e~~q~~~Nml~~~~~~r~~r~m~~~~~~~~ 227 (245) T protein:vir:97 156 SV-MQAIAY-------QAAVEFIVSKDADQTKLATAQQIATQLLMDVQSEQMSQKRLNMLVHNPTQRQFGIMAGGSQNVP 227 (245) T ss_pred HH-HHHHHH-------HHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHHHHhhCCcceeeCchhhhhhhhhhccccccc Confidence 54 355543 4577777888899999999999999999999886554332 22333333 Q ss_pred CCCC Q lcl|Aclame:pro 205 DIER 208 (208) Q Consensus 205 ~~t~ 208 (208) ...| T Consensus 228 ~~~~ 231 (245) T protein:vir:97 228 AYSH 231 (245) T ss_pred cccc Confidence 3334 No 17 >protein:vir:103305 Length: 245 # NCBI annotation: tail-like protein # Family: family:all:824 # MgeID: mge:1609 # MgeName: Era103 # Cross-refs: genbank:acc:YP_001039669;genbank:gi:125999998;genbank:GeneID:4818381 Probab=41.99 E-value=0.9 Score=20.83 Aligned_cols=183 Identities=11% Similarity=0.075 Sum_probs=101.0 Q ss_pred CCCcc--CHHHHHHHHHHHhcc---cCcc----hhhhHHHHHHHHHHHHhhhc--ccc-----cceEEEEEe-eCceeec Q lcl|Aclame:pro 1 MATIN--NVTDLAIAAIQWSDR---QDLT----QELLMLFIGNTTDRLNRLLR--VRE-----NEHFETLMA-FGGGIEI 63 (208) Q Consensus 1 m~ai~--~Y~~L~~av~~w~~R---~Dlt----~~~ip~FI~lAE~~lnR~LR--~~~-----mE~~~~l~~-~~g~~~L 63 (208) |+.-+ .-++.+.||..=|.- +=++ .+.-=-+....=.++||..+ ..+ -|...+|+. .+|.+.| T Consensus 13 ~~~~~~~~~dteLdAVN~~L~aIGEsPV~sld~~npdva~A~~IL~~v~~~vQ~llseGW~FNte~~~~ltPd~~g~i~i 92 (245) T protein:vir:10 13 LASVNLDTVDTRLEAINLCLRAVGYASIESEDSGDLDAADASKILATVGQRVQYNGGKGWWFNVEPNWQMTPDANGEILI 92 (245) T ss_pred CcccccccccchHHHHHHHHHhhcccccccccCCchhHHHHHHHHHHHHHHHHhhcCCCeeEeecCCceeccCCCCceec Confidence 65433 345566666555433 2221 11111122222334444432 111 134445542 4689999 Q ss_pred ChhHHhHhhhhccCCCcceeeeecCHHHHhhhhccccCCCCceEEEEEcCeEEEe-eecCCCc-eEEEEeeccCCCCCCC Q lcl|Aclame:pro 64 PEHFVALRSITGDALIGGRTLQYITQDIFSHYVNYNYQPQGVTYYTRLGNFWRVY-PVVPDGA-PFIVNYWTVLPELSLD 141 (208) Q Consensus 64 P~Dfle~r~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~i~g~~i~~~-P~p~~~~-~~~l~Yy~~iP~LS~~ 141 (208) |.|+|.+-.-... +++.... ..+ |.+-|-+...+..|. |++..+. .++|+|.-.|..|-.. T Consensus 93 P~n~L~v~~~~~~---~~~~~~~---------v~R-----GgkLYD~~n~T~~F~~pv~~~~~~~v~iV~~~pFedlPe~ 155 (245) T protein:vir:10 93 PNNAIAAWQDVRY---DDKKVLI---------SIR-----GRKVYNMNTHSTDFSNSLNREGFFRMTFMLNLPFEHMPVS 155 (245) T ss_pred Cccchhhhccccc---CCCccce---------EEc-----CCeeEecccCceeccCccccccceeEEEEeeCChhhccHH Confidence 9999987542111 1111111 111 224566666666665 4443333 5899999988887555 Q ss_pred CcccHHHHhchHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhhHH----------------hcCCceeeCC Q lcl|Aclame:pro 142 NPTTWALTKYPQIYLYGVLEQIYLYTMDEERSMFWGQKLERAVMELQNEENAAD----------------FASSRLAIKD 205 (208) Q Consensus 142 n~tNWLL~~~PdiYLyg~l~ea~~~~~d~er~~~w~~~~~~al~~l~~~d~~~r----------------~~~s~l~v~~ 205 (208) . ..|+-. -++....-.+..+++.++.+++..++|...+.+...+.+ +-|++-.++. T Consensus 156 ~-q~yI~~-------rAA~~f~~~~~G~~~~~q~l~q~e~~a~~~~~~~~~~q~~~Nm~~~~p~~~~~r~~v~~~~~~~~ 227 (245) T protein:vir:10 156 A-RQAIAY-------QAAVEFMVSKEFDAQKVQIWQQLAQQMQIDMGQESANQQSLNMFVNNPTQAHFGSMVGGPNANAT 227 (245) T ss_pred H-HHHHHH-------HHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCchhhhcchhccccccccc Confidence 4 355544 356777778889999999999999999999887664332 2234444444 Q ss_pred CCC Q lcl|Aclame:pro 206 IER 208 (208) Q Consensus 206 ~t~ 208 (208) ..| T Consensus 228 ~~~ 230 (245) T protein:vir:10 228 FSR 230 (245) T ss_pred ccc Confidence 444 No 18 >protein:vir:7328 Length: 201 # NCBI annotation: hypothetical protein # Family: family:all:1524 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848219;genbank:gi:30387390;genbank:GeneID:2641866 Probab=38.79 E-value=1 Score=20.47 Aligned_cols=175 Identities=11% Similarity=0.088 Sum_probs=87.1 Q ss_pred CCCccCHHHHHHHHHHHhcccC-cch--hhhHHHHHHHHHH----HHhhhcccccc---eEEEEE-----e--eCceeec Q lcl|Aclame:pro 1 MATINNVTDLAIAAIQWSDRQD-LTQ--ELLMLFIGNTTDR----LNRLLRVRENE---HFETLM-----A--FGGGIEI 63 (208) Q Consensus 1 m~ai~~Y~~L~~av~~w~~R~D-lt~--~~ip~FI~lAE~~----lnR~LR~~~mE---~~~~l~-----~--~~g~~~L 63 (208) |++. -++-+.+...++..+ |+. +.-+.. ..+... ..-+||.-+=. +.+.|. . -.-...| T Consensus 1 M~S~---v~IcN~AL~~iG~a~~I~s~~e~s~~A-~~c~~~Y~~~r~~~Lr~~pW~FA~~r~~La~~a~~p~~~~yaY~L 76 (201) T protein:vir:73 1 MASV---IEICNRALSNIGNSRSINSLIEASKEA-GQCSLHFDACRDAALADFDWNFATKRVALADTNNPPPDWQYAYQY 76 (201) T ss_pred CCCH---HHHHHHHHHhhcCcccccccccCCHHH-HHHHHhhHHHHHHHHhhcCchhHhhhhhhhhcccCCCCCcccccc Confidence 6644 458888888887432 321 000110 011111 11112211000 011111 1 1124779 Q ss_pred ChhHHhHhhhhccCCCcceeeeecCHHHHhhhhccccCCCCceEEEEEcCeEEEeeecCCCceEEEEeeccCCCCCCCCc Q lcl|Aclame:pro 64 PEHFVALRSITGDALIGGRTLQYITQDIFSHYVNYNYQPQGVTYYTRLGNFWRVYPVVPDGAPFIVNYWTVLPELSLDNP 143 (208) Q Consensus 64 P~Dfle~r~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~i~g~~i~~~P~p~~~~~~~l~Yy~~iP~LS~~n~ 143 (208) |.|+|.+++|...+..+.-.-...+-+. ...|.|.|+.|.- +...+.|.|-.+++. + T Consensus 77 P~Dclrv~~v~~~~~~~~~~~~~~~~~~-------------~~~~~ieg~~i~t-----d~~~~~l~Y~~~v~d-----~ 133 (201) T protein:vir:73 77 PSDCVRITEIMPTGIRNPTAAQRIEYVV-------------GSNEDLTGKLIYT-----DQPKAWLKYMARVTD-----V 133 (201) T ss_pred cccceeeeeeccccccccccccccchhc-------------cccccccCCEeee-----cCCceeEEEeecCCC-----c Confidence 9999999999765432110000000000 0237888887743 344688999988753 1 Q ss_pred ccHHHHhchHHHHHHHH-----HHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhhHHhcCCceeeCCCCC Q lcl|Aclame:pro 144 TTWALTKYPQIYLYGVL-----EQIYLYTMDEERSMFWGQKLERAVMELQNEENAADFASSRLAIKDIER 208 (208) Q Consensus 144 tNWLL~~~PdiYLyg~l-----~ea~~~~~d~er~~~w~~~~~~al~~l~~~d~~~r~~~s~l~v~~~t~ 208 (208) +.+|++..-+.- .-|....++...++.-.++++.++.+-...|...+... +........ T Consensus 134 -----~~fd~lF~~ala~~LAa~lA~plt~~~~~~~~~~q~~~~~~~~A~~~d~~e~~~~-~~~~~~~l~ 197 (201) T protein:vir:73 134 -----NMYDAIFMEALSWRLAAAINMALTGSADLGNNALTMYNRVILSAGSHSQNESQEP-QPPVDEFTA 197 (201) T ss_pred -----ccccHHHHHHHHHHHHHHhhHhhcCChHHHHHHHHHHHHHHHHHHHhhhccccCC-CCCCchHHH Confidence 245655544432 23455668999999999999999987777666554322 111111111 No 19 >protein:vir:95323 Length: 201 # NCBI annotation: hypothetical protein # Family: family:all:1524 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512268;genbank:gi:89152435;genbank:GeneID:3952992 Probab=33.91 E-value=1.3 Score=19.91 Aligned_cols=175 Identities=9% Similarity=0.095 Sum_probs=84.8 Q ss_pred CCCccCHHHHHHHHHHHhcccC-cch--hhhHHHHHHHHHH----HHhhhccccc---ceEEEEE-----eeC--ceeec Q lcl|Aclame:pro 1 MATINNVTDLAIAAIQWSDRQD-LTQ--ELLMLFIGNTTDR----LNRLLRVREN---EHFETLM-----AFG--GGIEI 63 (208) Q Consensus 1 m~ai~~Y~~L~~av~~w~~R~D-lt~--~~ip~FI~lAE~~----lnR~LR~~~m---E~~~~l~-----~~~--g~~~L 63 (208) |++. -++-+.+...++..+ |++ +.-+.. ..+... ..-+||.-+= -+.+.|. ..+ -...| T Consensus 1 M~S~---v~IcN~AL~~iG~a~~I~s~~e~s~~A-~~C~~~Y~~~r~~~L~~~pW~FA~~r~~La~~a~~~~~~~yay~L 76 (201) T protein:vir:95 1 MASV---VEICNRALSNIGNSRSINSLTEASKEA-GECSLHFEACRDAVLSDFDWNFATKRVALADTSNPPPDWEYAYQY 76 (201) T ss_pred CCCH---HHHHHHHHHHhCCcccccccccCCHHH-HHHHHhhHHHHHHHHhhcCchhhhhhhhcccccCCCCCCcccccc Confidence 6644 457777888887432 221 000100 011111 1112221110 0111111 111 14679 Q ss_pred ChhHHhHhhhhccCCCcceeeeecCHHHHhhhhccccCCCCceEEEEEcCeEEEeeecCCCceEEEEeeccCCCCCCCCc Q lcl|Aclame:pro 64 PEHFVALRSITGDALIGGRTLQYITQDIFSHYVNYNYQPQGVTYYTRLGNFWRVYPVVPDGAPFIVNYWTVLPELSLDNP 143 (208) Q Consensus 64 P~Dfle~r~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~i~g~~i~~~P~p~~~~~~~l~Yy~~iP~LS~~n~ 143 (208) |.|||.++++..++...+.......=+.. ..|.+.|+.|.- +..++.|.|=.+++.- T Consensus 77 P~Dclrv~~v~~~g~~~~~~~~~~~f~v~-------------~~~~~~g~~l~t-----d~~~~~l~Yv~~v~d~----- 133 (201) T protein:vir:95 77 PSDCLRITEIMLPGVRNPTAAMRVQYEVG-------------ADTNGTGKLIYT-----DQPQAWLKYVSRVTDV----- 133 (201) T ss_pred cchhhhhhhhccCCccccccccchhhhcc-------------ccccccCceeee-----cCCceEEEEeecCCCh----- Confidence 99999999997554322211111100110 125667766633 3456889998887531 Q ss_pred ccHHHHhchHHHHHHHH-----HHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhhHHhcCCceeeCCCCC Q lcl|Aclame:pro 144 TTWALTKYPQIYLYGVL-----EQIYLYTMDEERSMFWGQKLERAVMELQNEENAADFASSRLAIKDIER 208 (208) Q Consensus 144 tNWLL~~~PdiYLyg~l-----~ea~~~~~d~er~~~w~~~~~~al~~l~~~d~~~r~~~s~l~v~~~t~ 208 (208) +.+|+++.-+.- .-|....++...++...++++.++.+-...|...+-. ..+-+..... T Consensus 134 -----~~fd~~F~~ala~~LAa~la~plt~~~~~~~~~~q~~~~~l~~A~~~da~e~~~-~~~~~~~~l~ 197 (201) T protein:vir:95 134 -----NMFDAIFMEALAWRLAAAINMALTGNADLGTFALNMYNRVILSAGSHSQNESQE-PQPPVDEFTI 197 (201) T ss_pred -----hhccHHHHHHHHHHHHHHhhHhhcCChHHHHHHHHHHHHHHHHHHhcccccCcc-cCCCcchhhh Confidence 135555443322 2244566889999999999999998776665544321 1111111111 No 20 >protein:vir:100103 Length: 120 # NCBI annotation: gp7 # Family: family:all:363 # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945037;genbank:gi:38707897;genbank:GeneID:2744150 Probab=31.53 E-value=0.77 Score=21.21 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=51.2 Q ss_pred CCCccCHHHHHHHHHHHhcccCcchhhhHHHHHHHHHHHHhhhcccccceEEEE-------EeeCceeecChhHHhHhhh Q lcl|Aclame:pro 1 MATINNVTDLAIAAIQWSDRQDLTQELLMLFIGNTTDRLNRLLRVRENEHFETL-------MAFGGGIEIPEHFVALRSI 73 (208) Q Consensus 1 m~ai~~Y~~L~~av~~w~~R~Dlt~~~ip~FI~lAE~~lnR~LR~~~mE~~~~l-------~~~~g~~~LP~Dfle~r~i 73 (208) |+-+ +.++.|....=- .|.-|+.|-.+|.-||..+-+.++-.-.|...-+ ........+|+++-....+ T Consensus 5 m~~v-tL~e~K~hLRvd---~d~DD~lI~~~i~AA~~~v~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~AvLl 80 (120) T protein:vir:10 5 TPIV-SLEVALAHLRED---AGVADDLIKIYIGAATQSASDYVDRKLYANDAEMQAAVADATAGADPIVANDAIRAAILL 80 (120) T ss_pred CCcc-CHHHHHHHcCCC---CCcchHHHHHHHHHHHHHHHHHhCCcccccccccchhhhccccccccccCCHHHHHHHHH Confidence 6555 455555554432 2334578899999998888887765444433222 2233456689998776644 Q ss_pred hccCCCcc------------eeeeecCHHHHhhhhccccCCCCc Q lcl|Aclame:pro 74 TGDALIGG------------RTLQYITQDIFSHYVNYNYQPQGV 105 (208) Q Consensus 74 ~~~~~~~~------------~~l~~~~~~~~~~~~~~~~~~~~~ 105 (208) .....+.. ..+.+.-...+..||..= |+ T Consensus 81 lvg~~YenRe~~~~~~~~~~~~lP~~v~~Ll~~yR~~~----gv 120 (120) T protein:vir:10 81 TIGKLYAFREDVVSGASASVTELPSGAKSLLFPYRVGL----GV 120 (120) T ss_pred HHHHHHhchhhhhhcccccccccCHHHHHHHHHhhhcc----CC Confidence 32211111 123333344555565432 11 No 21 >protein:vir:10365 Length: 115 # NCBI annotation: conserved phage protein # Family: family:all:363 # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858957;genbank:gi:32128422;genbank:GeneID:2648387 Probab=27.11 E-value=1.2 Score=20.06 Aligned_cols=99 Identities=7% Similarity=0.043 Sum_probs=47.0 Q ss_pred CCCccCHHHHHHHHHHHhcccCcchhhhHHHHHHHHHHHHhhhcccccceEEEEE-------eeCceeecChhHHhHhhh Q lcl|Aclame:pro 1 MATINNVTDLAIAAIQWSDRQDLTQELLMLFIGNTTDRLNRLLRVRENEHFETLM-------AFGGGIEIPEHFVALRSI 73 (208) Q Consensus 1 m~ai~~Y~~L~~av~~w~~R~Dlt~~~ip~FI~lAE~~lnR~LR~~~mE~~~~l~-------~~~g~~~LP~Dfle~r~i 73 (208) |. |..++|....=-.+=+|.-|+.|-.+|.-|+..+-..+.-+-.|....+. ...+...+|+++-....+ T Consensus 1 mv---tLe~~K~hLRid~~d~d~dD~li~~~i~AA~~~v~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~p~~i~~AiLL 77 (115) T protein:vir:10 1 MI---TLAMVQRHLQAELYEDDERDYVMQQLLPAARESAELFINRKLYDTQADMLADQAAGVDPAGQLLITRTVEQAILL 77 (115) T ss_pred CC---CHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCcccccccccccccccccCCcccccCChHHHHHHHH Confidence 44 44555554421111122335677888877766655554433233322221 233456799999888755 Q ss_pred hccCCCc-------c--eeeeecCHHHHhhhhccccCCCCce Q lcl|Aclame:pro 74 TGDALIG-------G--RTLQYITQDIFSHYVNYNYQPQGVT 106 (208) Q Consensus 74 ~~~~~~~-------~--~~l~~~~~~~~~~~~~~~~~~~~~~ 106 (208) ....-+. + ..+.+-....+..||+..+= + T Consensus 78 lvg~~Y~nRe~~~~~~~~elP~~v~~LL~pyR~~~gv----~ 115 (115) T protein:vir:10 78 TVGEWYANREQVWVKGVGLVTSSAQNLLHPYRKFAGV----R 115 (115) T ss_pred HHHHHHhcchhcccchhhhcCHHHHHHHHHHHhcCCC----C Confidence 4322111 1 12222223455566655432 2 No 22 >protein:vir:6325 Length: 184 # NCBI annotation: tail tubular protein A # Family: family:all:824 # MgeID: mge:132 # MgeName: phiKMV # Cross-refs: genbank:acc:NP_877472;genbank:gi:33300844;uniprot:Q7Y2D2;genbank:GeneID:1482614 Probab=20.91 E-value=2.7 Score=18.23 Aligned_cols=165 Identities=13% Similarity=-0.069 Sum_probs=92.0 Q ss_pred HHHHHHHHHHh---cccCc----chhhhHHHHHHHHHHHHhhhc------ccccceEEEEEeeCceeecChhHHhHhhhh Q lcl|Aclame:pro 8 TDLAIAAIQWS---DRQDL----TQELLMLFIGNTTDRLNRLLR------VRENEHFETLMAFGGGIEIPEHFVALRSIT 74 (208) Q Consensus 8 ~~L~~av~~w~---~R~Dl----t~~~ip~FI~lAE~~lnR~LR------~~~mE~~~~l~~~~g~~~LP~Dfle~r~i~ 74 (208) -..+.||..=| +.+=+ .++.-=.++..+=.+.||.+- .-+-..+.+-.. +|.+.+|.|+|.+-.- T Consensus 1 ~teL~AVN~~L~aIGespV~sld~~npdva~a~~iL~~v~~~vqs~GW~FNte~~~~ltPd~-~g~I~~P~n~L~v~~~- 78 (184) T protein:vir:63 1 MLLLDAVNVILRKIGELPTLSMDETYPTMAIALPELEDQRIQLLTQGWWFNTWWRHKLTPDP-TGRINLPKGTLAFYPD- 78 (184) T ss_pred CchHHHHHHHHHhhCccccceecCCCccHHHHHHHHHHHHHHHhcCCceEeecCCceeeecC-CCeEEcCcceeeeecC- Confidence 11222222222 22111 112222344555555555543 122223344444 6899999999998422 Q ss_pred ccCCCcceeeeecCHHHHhhhhccccCCCCceEEEEEcCeEEEeeecCCCceEEEEeeccCCCCCCCCcccHHHHhchHH Q lcl|Aclame:pro 75 GDALIGGRTLQYITQDIFSHYVNYNYQPQGVTYYTRLGNFWRVYPVVPDGAPFIVNYWTVLPELSLDNPTTWALTKYPQI 154 (208) Q Consensus 75 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~f~i~g~~i~~~P~p~~~~~~~l~Yy~~iP~LS~~n~tNWLL~~~Pdi 154 (208) ++ .+.. | |.+-|-+..++..|. +.-.+.|+|.-.|..|-... ..|+-. T Consensus 79 -----~~-d~~~---------R-------gg~LyD~~n~t~~F~----~~i~v~iv~~~~FeelPe~~-~~~I~~----- 126 (184) T protein:vir:63 79 -----SP-DLQW---------D-------GLGVRDANTGDDRIG----KPVEGRLVLSREWDHIPEIA-QRVIAH----- 126 (184) T ss_pred -----CC-ceEE---------c-------CCEEEeccCCcEEeC----CceEEEEEeecChhhccHHH-HHHHHH----- Confidence 11 1111 1 124567777777774 23358899999998885554 355543 Q ss_pred HHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhhHHhcC--CceeeCCCCC Q lcl|Aclame:pro 155 YLYGVLEQIYLYTMDEERSMFWGQKLERAVMELQNEENAADFAS--SRLAIKDIER 208 (208) Q Consensus 155 YLyg~l~ea~~~~~d~er~~~w~~~~~~al~~l~~~d~~~r~~~--s~l~v~~~t~ 208 (208) -++....-.+..+++..+.+++..++|...+.+.+-+.+--+ ++...+-+.| T Consensus 127 --rAa~~f~~~~~G~~~~~q~l~~~e~~a~~~~~~~e~~q~~~Nm~~~~~~~~~~~ 180 (184) T protein:vir:63 127 --QAALAVYTHEIGPDETAQVIAQELQAYQNELSRMHTRSRPLNTQAKRSFSRWRR 180 (184) T ss_pred --HHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhhhHHHHH Confidence 457777888889999999999999999999988665443222 1122222222 Done!