Query lcl|Aclame:protein:vir:1266|NCBI_annot:hypothetical protein|genbank:acc:NP_690758;genbank:gi:22854998;genbank:GeneID:955213 Match_columns 416 No_of_seqs 131 out of 1104 Neff 9.8 Searched_HMMs 1612 Date Sat Nov 30 08:15:52 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_5 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_5_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:1266 Length: 416 # 100.0 3E-114 2E-117 642.8 44.4 416 1-416 1-416 (416) 2 protein:vir:4509 Length: 424 # 100.0 7E-103 4E-106 580.6 43.2 403 1-414 17-424 (424) 3 protein:vir:483 Length: 413 # 100.0 2E-102 1E-105 577.8 43.9 407 1-416 1-412 (413) 4 protein:vir:105064 Length: 421 100.0 5E-102 3E-105 576.1 43.0 409 1-416 1-418 (421) 5 protein:vir:102080 Length: 429 100.0 2E-101 2E-104 572.2 44.9 414 1-416 1-428 (429) 6 protein:vir:102118 Length: 409 100.0 2E-101 9E-105 573.3 43.5 399 1-412 1-409 (409) 7 protein:vir:1431 Length: 419 # 100.0 1E-101 7E-105 574.1 42.4 408 1-416 1-416 (419) 8 protein:vir:107605 Length: 432 100.0 2E-100 9E-104 567.8 44.1 414 1-416 1-431 (432) 9 protein:vir:102855 Length: 432 100.0 2E-100 9E-104 567.8 44.1 414 1-416 1-431 (432) 10 protein:vir:105002 Length: 432 100.0 2E-100 9E-104 567.8 44.1 414 1-416 1-431 (432) 11 protein:vir:81072 Length: 432 100.0 1E-100 8E-104 568.3 42.9 414 1-416 7-431 (432) 12 protein:vir:4454 Length: 414 # 100.0 3E-100 2E-103 566.6 44.1 407 1-416 2-413 (414) 13 protein:vir:97060 Length: 432 100.0 3E-100 2E-103 566.0 42.5 414 1-416 8-431 (432) 14 protein:vir:80333 Length: 419 100.0 2E-100 1E-103 567.0 40.3 409 1-416 1-417 (419) 15 protein:vir:10362 Length: 432 100.0 6E-100 4E-103 564.5 42.3 413 1-416 8-431 (432) 16 protein:vir:4337 Length: 434 # 100.0 2E-99 1E-102 561.7 42.6 411 1-416 4-428 (434) 17 protein:vir:5737 Length: 419 # 100.0 2.7E-99 2E-102 561.0 42.1 408 1-416 1-417 (419) 18 protein:vir:100150 Length: 437 100.0 6.4E-99 4E-102 558.9 43.2 414 1-416 1-433 (437) 19 protein:vir:189 Length: 424 # 100.0 8.6E-99 5E-102 558.2 42.0 398 1-416 15-423 (424) 20 protein:vir:1380 Length: 422 # 100.0 1.2E-98 8E-102 557.4 41.6 401 1-415 1-422 (422) 21 protein:vir:1884 Length: 424 # 100.0 1.4E-98 8E-102 557.1 41.8 398 1-416 15-423 (424) 22 protein:vir:81152 Length: 411 100.0 2.1E-98 1E-101 556.1 42.3 395 1-412 1-411 (411) 23 protein:vir:100249 Length: 431 100.0 4E-98 2E-101 554.6 42.5 398 1-407 1-431 (431) 24 protein:vir:93610 Length: 454 100.0 1.7E-97 1E-100 551.1 42.8 410 1-416 1-432 (454) 25 protein:vir:98396 Length: 441 100.0 3.2E-96 2E-99 544.1 42.8 403 1-414 23-441 (441) 26 protein:vir:9408 Length: 441 # 100.0 1.1E-95 7E-99 541.1 42.6 403 1-414 23-441 (441) 27 protein:vir:79984 Length: 441 100.0 1.1E-95 7E-99 541.1 42.6 403 1-414 23-441 (441) 28 protein:vir:93943 Length: 409 100.0 9.9E-96 6.2E-99 541.4 42.1 400 1-416 1-409 (409) 29 protein:vir:2683 Length: 412 # 100.0 8.8E-96 5.5E-99 541.7 41.8 403 1-416 1-412 (412) 30 protein:vir:8418 Length: 409 # 100.0 2.5E-95 1.5E-98 539.2 42.9 403 1-415 1-409 (409) 31 protein:vir:6240 Length: 457 # 100.0 3.3E-95 2.1E-98 538.5 42.8 411 1-416 1-450 (457) 32 protein:vir:96980 Length: 409 100.0 2E-95 1.2E-98 539.7 41.0 403 1-416 1-409 (409) 33 protein:vir:94426 Length: 409 100.0 4E-95 2.5E-98 538.1 40.9 404 1-416 1-409 (409) 34 protein:vir:81095 Length: 416 100.0 7.2E-95 4.4E-98 536.7 42.2 402 1-414 1-416 (416) 35 protein:vir:4598 Length: 416 # 100.0 7.2E-95 4.4E-98 536.7 42.2 402 1-414 1-416 (416) 36 protein:vir:7853 Length: 518 # 100.0 9.6E-95 5.9E-98 536.0 42.2 409 1-416 1-436 (518) 37 protein:vir:1326 Length: 457 # 100.0 4.9E-94 3.1E-97 532.1 42.6 411 1-416 1-447 (457) 38 protein:vir:101648 Length: 518 100.0 7.9E-94 4.9E-97 531.0 43.2 409 1-416 1-433 (518) 39 protein:vir:3868 Length: 417 # 100.0 1.8E-93 1.1E-96 529.1 40.8 399 1-416 1-406 (417) 40 protein:vir:9702 Length: 406 # 100.0 4.4E-92 2.7E-95 521.5 41.9 396 1-416 1-403 (406) 41 protein:vir:81218 Length: 423 100.0 4.6E-92 2.9E-95 521.3 41.8 401 1-412 1-423 (423) 42 protein:vir:101647 Length: 460 100.0 1.5E-90 9.6E-94 513.0 41.2 401 1-415 3-460 (460) 43 protein:vir:80134 Length: 403 100.0 1.3E-87 8.1E-91 496.9 40.5 392 1-415 1-403 (403) 44 protein:vir:95378 Length: 406 100.0 3.2E-87 2E-90 494.8 41.5 396 1-415 1-406 (406) 45 protein:vir:9359 Length: 348 # 100.0 3.5E-87 2.2E-90 494.6 38.7 345 61-416 1-348 (348) 46 protein:vir:102727 Length: 945 100.0 1.3E-85 8.2E-89 485.9 40.4 411 1-416 63-530 (945) 47 protein:vir:960 Length: 413 # 100.0 1.9E-85 1.2E-88 485.0 38.2 388 1-412 11-413 (413) 48 protein:vir:8100 Length: 466 # 100.0 3.1E-84 1.9E-87 478.4 41.8 407 1-415 1-466 (466) 49 protein:vir:94666 Length: 723 100.0 3.2E-84 2E-87 478.3 38.9 391 12-416 1-446 (723) 50 protein:vir:8317 Length: 409 # 100.0 2.2E-84 1.3E-87 479.3 37.7 370 1-389 2-409 (409) 51 protein:vir:3843 Length: 397 # 100.0 2.7E-82 1.7E-85 467.8 41.4 385 1-416 1-393 (397) 52 protein:vir:6210 Length: 394 # 100.0 6.7E-83 4.2E-86 471.1 37.8 384 1-415 1-394 (394) 53 protein:vir:104259 Length: 403 100.0 5.1E-82 3.1E-85 466.3 37.9 386 1-413 1-403 (403) 54 protein:vir:4854 Length: 386 # 100.0 1.8E-80 1.1E-83 457.7 39.8 378 1-416 1-386 (386) 55 protein:vir:9507 Length: 395 # 100.0 2E-80 1.2E-83 457.5 38.1 379 1-416 1-394 (395) 56 protein:vir:100650 Length: 395 100.0 2E-80 1.2E-83 457.5 38.1 379 1-416 1-394 (395) 57 protein:vir:101289 Length: 395 100.0 2E-80 1.2E-83 457.5 38.1 379 1-416 1-394 (395) 58 protein:vir:7407 Length: 392 # 100.0 5.7E-80 3.5E-83 455.0 38.3 375 1-416 3-391 (392) 59 protein:vir:95965 Length: 385 100.0 5.1E-80 3.2E-83 455.3 35.5 368 1-415 1-385 (385) 60 protein:vir:100187 Length: 385 100.0 3.8E-79 2.3E-82 450.5 39.6 371 1-415 1-385 (385) 61 protein:vir:100882 Length: 383 100.0 4.5E-79 2.8E-82 450.1 39.2 371 1-413 1-383 (383) 62 protein:vir:80796 Length: 574 100.0 1.5E-78 9.5E-82 447.2 39.5 404 1-416 66-525 (574) 63 protein:vir:1023 Length: 392 # 100.0 1.8E-78 1.1E-81 446.8 39.1 375 1-416 3-391 (392) 64 protein:vir:3989 Length: 392 # 100.0 1.8E-78 1.1E-81 446.8 39.1 375 1-416 3-391 (392) 65 protein:vir:4995 Length: 384 # 100.0 1.2E-78 7.5E-82 447.8 36.2 370 1-384 1-384 (384) 66 protein:vir:94002 Length: 378 100.0 1E-78 6.4E-82 448.1 34.7 359 1-415 1-378 (378) 67 protein:vir:1082 Length: 359 # 100.0 9.2E-78 5.7E-81 442.9 37.3 348 1-378 1-359 (359) 68 protein:vir:93867 Length: 378 100.0 3.2E-78 2E-81 445.4 34.8 359 1-415 1-378 (378) 69 protein:vir:80644 Length: 551 100.0 2.1E-77 1.3E-80 441.0 37.6 409 1-416 33-526 (551) 70 protein:vir:4089 Length: 395 # 100.0 1.7E-77 1.1E-80 441.4 36.2 379 1-416 1-393 (395) 71 protein:vir:1661 Length: 378 # 100.0 1.3E-77 7.9E-81 442.2 35.4 359 1-415 1-378 (378) 72 protein:vir:9641 Length: 395 # 100.0 1.1E-77 6.6E-81 442.6 35.0 374 1-416 1-393 (395) 73 protein:vir:4952 Length: 386 # 100.0 9E-77 5.6E-80 437.5 40.0 379 1-416 1-386 (386) 74 protein:vir:100691 Length: 535 100.0 1.5E-76 9E-80 436.4 40.0 406 1-416 53-516 (535) 75 protein:vir:78310 Length: 376 100.0 3.9E-77 2.4E-80 439.5 34.8 361 1-413 1-376 (376) 76 protein:vir:4828 Length: 382 # 100.0 4.4E-76 2.7E-79 433.7 39.7 370 1-416 1-382 (382) 77 protein:vir:98643 Length: 395 100.0 9E-76 5.6E-79 432.0 36.9 375 1-416 1-393 (395) 78 protein:vir:63755 Length: 547 100.0 1.2E-75 7.5E-79 431.3 37.1 411 1-416 29-516 (547) 79 protein:vir:858 Length: 378 # 100.0 1.6E-75 9.7E-79 430.7 35.0 357 1-415 1-378 (378) 80 protein:vir:94869 Length: 378 100.0 1.9E-75 1.1E-78 430.3 34.6 359 1-415 1-378 (378) 81 protein:vir:96579 Length: 576 100.0 5.8E-74 3.6E-77 422.1 39.8 409 1-416 33-525 (576) 82 protein:vir:3153 Length: 467 # 100.0 2.7E-74 1.6E-77 424.0 36.4 375 40-416 1-444 (467) 83 protein:vir:95599 Length: 563 100.0 1.9E-73 1.1E-76 419.3 38.6 406 1-416 42-527 (563) 84 protein:vir:99312 Length: 563 100.0 1.9E-73 1.1E-76 419.3 38.6 406 1-416 42-527 (563) 85 protein:vir:4194 Length: 540 # 100.0 2.5E-72 1.5E-75 413.1 36.7 393 1-416 1-467 (540) 86 protein:vir:4156 Length: 542 # 100.0 6.5E-72 4E-75 410.9 37.5 394 2-416 1-452 (542) 87 protein:vir:99452 Length: 651 100.0 1.1E-69 6.5E-73 398.7 33.7 412 1-416 1-542 (651) 88 protein:vir:79772 Length: 648 100.0 5.7E-68 3.5E-71 389.2 38.2 409 1-416 9-500 (648) 89 protein:vir:78641 Length: 278 100.0 1.8E-64 1.1E-67 370.1 31.2 275 61-342 1-278 (278) 90 protein:vir:79150 Length: 368 100.0 7.6E-54 4.7E-57 311.8 27.6 333 1-358 1-368 (368) 91 protein:vir:267 Length: 348 # 100.0 1E-52 6.2E-56 305.7 31.7 323 1-350 1-348 (348) 92 protein:vir:103971 Length: 376 100.0 3E-52 1.9E-55 303.0 31.8 312 1-349 26-376 (376) 93 protein:vir:100328 Length: 346 100.0 5E-52 3.1E-55 301.8 29.6 323 1-347 1-346 (346) 94 protein:vir:79207 Length: 351 100.0 2.9E-51 1.8E-54 297.7 31.0 312 1-349 1-351 (351) 95 protein:vir:78191 Length: 351 100.0 3.9E-51 2.4E-54 297.0 31.2 312 1-349 1-351 (351) 96 protein:vir:98567 Length: 340 100.0 8E-51 4.9E-54 295.2 30.5 316 1-346 1-340 (340) 97 protein:vir:78749 Length: 337 100.0 1.4E-51 8.5E-55 299.4 25.7 317 1-343 1-337 (337) 98 protein:vir:1150 Length: 350 # 100.0 4E-51 2.5E-54 296.9 27.0 323 1-342 1-350 (350) 99 protein:vir:5691 Length: 344 # 100.0 4.6E-50 2.9E-53 291.1 30.1 317 1-347 1-344 (344) 100 protein:vir:6058 Length: 344 # 100.0 4.3E-50 2.7E-53 291.2 29.0 317 1-347 1-344 (344) 101 protein:vir:3780 Length: 345 # 100.0 7.9E-50 4.9E-53 289.8 29.8 322 1-344 1-345 (345) 102 protein:vir:4698 Length: 251 # 100.0 2E-50 1.3E-53 293.0 26.4 242 1-251 1-251 (251) 103 protein:vir:3743 Length: 345 # 100.0 1.8E-49 1.1E-52 287.8 30.9 321 1-344 1-345 (345) 104 protein:vir:2013 Length: 344 # 100.0 3.3E-50 2E-53 291.9 26.2 317 1-347 1-344 (344) 105 protein:vir:98853 Length: 219 100.0 1.4E-41 8.5E-45 244.6 20.9 203 138-346 1-219 (219) 106 protein:vir:5249 Length: 437 # 99.9 8.2E-27 5.1E-30 163.6 31.6 378 18-415 1-437 (437) 107 protein:vir:107742 Length: 537 99.9 6E-23 3.7E-26 142.4 28.2 400 1-416 48-532 (537) 108 protein:vir:94049 Length: 532 99.9 1.1E-22 7.1E-26 140.9 28.7 400 1-416 33-516 (532) 109 protein:vir:103860 Length: 528 99.8 2.1E-20 1.3E-23 128.5 32.0 405 1-416 3-449 (528) 110 protein:vir:79647 Length: 435 99.8 3.2E-21 2E-24 132.9 27.5 384 1-413 1-435 (435) 111 protein:vir:99563 Length: 862 99.8 7.4E-21 4.6E-24 130.9 27.9 396 1-416 98-582 (862) 112 protein:vir:99232 Length: 526 99.8 4.4E-20 2.7E-23 126.7 32.0 405 1-416 3-448 (526) 113 protein:vir:79233 Length: 526 99.8 6.9E-20 4.3E-23 125.6 32.5 405 1-416 3-447 (526) 114 protein:vir:108215 Length: 469 99.8 8.1E-20 5E-23 125.2 32.6 399 6-416 1-455 (469) 115 protein:vir:104338 Length: 422 99.8 1E-19 6.2E-23 124.8 27.7 374 14-411 1-422 (422) 116 protein:vir:96068 Length: 765 99.8 1.7E-19 1E-22 123.5 26.7 398 1-416 38-538 (765) 117 protein:vir:107662 Length: 427 99.8 2.7E-19 1.7E-22 122.4 27.7 368 4-414 1-427 (427) 118 protein:vir:80040 Length: 461 99.8 1.1E-19 6.8E-23 124.5 25.4 387 1-416 1-461 (461) 119 protein:vir:99853 Length: 488 99.8 5.7E-19 3.5E-22 120.6 29.1 385 7-416 1-408 (488) 120 protein:vir:1986 Length: 512 # 99.8 7.1E-19 4.4E-22 120.1 29.6 395 3-416 1-444 (512) 121 protein:vir:107880 Length: 491 99.8 1.4E-17 8.6E-21 113.0 33.1 388 1-416 1-420 (491) 122 protein:vir:79063 Length: 491 99.8 1.3E-17 7.8E-21 113.2 32.7 389 1-416 7-422 (491) 123 protein:vir:79538 Length: 502 99.8 5.7E-19 3.5E-22 120.6 23.7 415 1-415 1-502 (502) 124 protein:vir:389 Length: 530 # 99.7 9.2E-18 5.7E-21 114.0 24.6 413 1-416 1-526 (530) 125 protein:vir:96738 Length: 505 99.7 3.6E-18 2.2E-21 116.2 22.1 412 1-414 9-505 (505) 126 protein:vir:95254 Length: 488 99.7 1.4E-15 8.9E-19 102.0 30.4 403 10-416 1-481 (488) 127 protein:vir:3420 Length: 533 # 99.6 1.7E-16 1.1E-19 107.0 23.2 411 1-416 10-532 (533) 128 protein:vir:79511 Length: 448 99.6 1.2E-15 7.2E-19 102.5 27.7 396 1-416 1-439 (448) 129 protein:vir:6382 Length: 553 # 99.6 5.3E-16 3.3E-19 104.3 24.5 413 1-416 1-552 (553) 130 protein:vir:77981 Length: 448 99.6 1E-14 6.2E-18 97.3 28.9 386 1-416 1-434 (448) 131 protein:vir:10321 Length: 495 99.6 1.2E-15 7.4E-19 102.4 22.0 410 1-415 3-495 (495) 132 protein:vir:95542 Length: 548 99.6 6.8E-16 4.2E-19 103.7 19.9 415 1-416 1-515 (548) 133 protein:vir:98816 Length: 446 99.5 1.7E-14 1E-17 96.1 24.8 366 1-381 1-446 (446) 134 protein:vir:101541 Length: 694 99.5 1.7E-14 1E-17 96.1 23.7 399 1-416 66-543 (694) 135 protein:vir:78589 Length: 695 99.5 9.2E-14 5.7E-17 92.1 24.8 399 1-416 67-544 (695) 136 protein:vir:106716 Length: 698 99.5 6.3E-14 3.9E-17 93.0 23.8 399 1-416 67-547 (698) 137 protein:vir:3648 Length: 695 # 99.5 1.4E-13 8.5E-17 91.1 24.4 399 1-416 67-544 (695) 138 protein:vir:105782 Length: 449 99.4 1.4E-13 8.8E-17 91.0 22.8 381 1-416 1-449 (449) 139 protein:vir:78161 Length: 355 99.4 6.7E-13 4.2E-16 87.3 26.5 298 116-416 1-334 (355) 140 protein:vir:106491 Length: 646 99.2 1.4E-11 8.4E-15 80.2 20.1 405 1-416 1-486 (646) 141 protein:vir:102426 Length: 631 99.1 1.3E-11 8.2E-15 80.2 17.1 408 1-416 8-509 (631) 142 protein:vir:8654 Length: 629 # 99.1 3.3E-11 2.1E-14 78.0 17.2 406 1-416 1-507 (629) 143 protein:vir:99088 Length: 629 99.0 4E-11 2.5E-14 77.6 17.1 406 1-416 1-507 (629) 144 protein:vir:98444 Length: 434 99.0 1.2E-09 7.3E-13 69.5 22.6 366 27-416 1-430 (434) 145 protein:vir:106027 Length: 629 99.0 4.4E-10 2.7E-13 71.9 19.7 409 1-416 1-502 (629) 146 protein:vir:107517 Length: 639 98.9 1.9E-10 1.2E-13 73.9 17.2 409 1-416 1-513 (639) 147 protein:vir:97900 Length: 639 98.9 1.9E-10 1.2E-13 73.9 17.2 409 1-416 1-513 (639) 148 protein:vir:38 Length: 496 # N 98.9 1.6E-08 9.6E-12 63.4 25.1 388 1-415 16-496 (496) 149 protein:vir:5961 Length: 503 # 98.9 2.4E-08 1.5E-11 62.4 28.9 392 1-416 13-500 (503) 150 protein:vir:7768 Length: 484 # 98.8 8.9E-09 5.5E-12 64.7 22.1 389 1-416 19-481 (484) 151 protein:vir:104082 Length: 485 98.8 8.5E-09 5.3E-12 64.8 21.0 388 1-413 16-485 (485) 152 protein:vir:4898 Length: 502 # 98.8 5.1E-08 3.2E-11 60.6 24.6 398 1-416 40-492 (502) 153 protein:vir:106639 Length: 481 98.7 1.8E-08 1.1E-11 63.0 21.7 390 1-416 6-481 (481) 154 protein:vir:7987 Length: 456 # 98.7 1.5E-08 9.2E-12 63.5 20.9 384 1-416 8-454 (456) 155 protein:vir:5839 Length: 533 # 98.7 2.2E-08 1.4E-11 62.6 21.5 405 1-416 18-511 (533) 156 protein:vir:105889 Length: 474 98.7 8E-08 5E-11 59.5 26.6 393 1-416 1-473 (474) 157 protein:vir:94101 Length: 474 98.7 8E-08 5E-11 59.5 26.6 393 1-416 1-473 (474) 158 protein:vir:99522 Length: 470 98.7 2.2E-08 1.4E-11 62.6 21.0 383 1-415 29-470 (470) 159 protein:vir:95806 Length: 440 98.7 4.5E-08 2.8E-11 60.9 22.4 387 2-415 1-440 (440) 160 protein:vir:4223 Length: 486 # 98.7 6.6E-08 4.1E-11 60.0 23.3 388 1-412 16-486 (486) 161 protein:vir:2427 Length: 485 # 98.7 1.1E-08 6.9E-12 64.2 19.0 391 1-413 16-485 (485) 162 protein:vir:93747 Length: 472 98.7 9.5E-08 5.9E-11 59.1 23.9 381 1-416 23-469 (472) 163 protein:vir:2341 Length: 488 # 98.7 6.2E-08 3.9E-11 60.1 22.9 397 1-416 11-485 (488) 164 protein:vir:105819 Length: 456 98.7 6.7E-08 4.2E-11 59.9 23.0 384 1-416 8-454 (456) 165 protein:vir:102602 Length: 456 98.7 6.7E-08 4.2E-11 59.9 23.0 384 1-416 8-454 (456) 166 protein:vir:95113 Length: 474 98.7 9.9E-08 6.1E-11 59.0 23.6 375 1-416 30-473 (474) 167 protein:vir:99072 Length: 479 98.7 4.4E-08 2.7E-11 60.9 21.5 386 1-416 17-469 (479) 168 protein:vir:94742 Length: 409 98.6 1.5E-07 9.5E-11 57.9 25.6 343 1-378 4-409 (409) 169 protein:vir:1236 Length: 483 # 98.6 1.9E-07 1.2E-10 57.4 23.6 382 1-416 34-482 (483) 170 protein:vir:99916 Length: 504 98.6 2E-07 1.3E-10 57.3 26.2 397 1-416 24-504 (504) 171 protein:vir:1634 Length: 409 # 98.6 2.2E-07 1.3E-10 57.1 24.9 343 1-378 4-409 (409) 172 protein:vir:3964 Length: 453 # 98.6 1.3E-07 8.2E-11 58.3 22.1 385 1-415 9-453 (453) 173 protein:vir:94805 Length: 492 98.6 2.6E-07 1.6E-10 56.7 23.6 381 1-415 47-492 (492) 174 protein:vir:103951 Length: 511 98.6 2.9E-07 1.8E-10 56.4 26.0 393 1-416 40-503 (511) 175 protein:vir:9306 Length: 511 # 98.5 3.2E-07 2E-10 56.2 24.9 396 1-416 40-503 (511) 176 protein:vir:9871 Length: 429 # 98.5 3.9E-07 2.4E-10 55.7 22.9 370 1-415 4-429 (429) 177 protein:vir:96494 Length: 501 98.5 4.1E-07 2.5E-10 55.6 27.6 398 1-415 38-501 (501) 178 protein:vir:103219 Length: 201 98.5 1.8E-08 1.1E-11 63.0 14.9 186 214-413 1-201 (201) 179 protein:vir:78537 Length: 480 98.5 4.8E-07 3E-10 55.2 23.4 393 1-416 6-467 (480) 180 protein:vir:97336 Length: 492 98.5 5.2E-07 3.2E-10 55.0 24.2 379 1-416 43-489 (492) 181 protein:vir:2500 Length: 501 # 98.5 5.3E-07 3.3E-10 55.0 22.4 382 1-416 30-500 (501) 182 protein:vir:97171 Length: 512 98.5 5.5E-07 3.4E-10 54.9 25.3 396 1-416 40-504 (512) 183 protein:vir:96240 Length: 511 98.5 5.5E-07 3.4E-10 54.9 26.0 394 1-416 40-503 (511) 184 protein:vir:80959 Length: 499 98.4 6.4E-07 4E-10 54.5 26.0 388 1-415 16-499 (499) 185 protein:vir:78227 Length: 480 98.4 8.4E-07 5.2E-10 53.9 24.4 391 1-416 6-471 (480) 186 protein:vir:2732 Length: 501 # 98.4 8.7E-07 5.4E-10 53.8 26.3 400 1-416 38-499 (501) 187 protein:vir:80680 Length: 441 98.4 5.7E-07 3.5E-10 54.8 20.4 375 1-415 7-441 (441) 188 protein:vir:79043 Length: 479 98.4 1.1E-06 6.9E-10 53.2 26.0 379 1-416 22-479 (479) 189 protein:vir:3609 Length: 452 # 98.3 1.4E-06 8.7E-10 52.7 22.4 382 1-415 8-452 (452) 190 protein:vir:78805 Length: 511 98.3 1.5E-06 9.4E-10 52.5 25.1 391 1-416 40-503 (511) 191 protein:vir:96366 Length: 511 98.3 1.5E-06 9.4E-10 52.5 25.1 391 1-416 40-503 (511) 192 protein:vir:9751 Length: 422 # 98.3 1.5E-06 9.5E-10 52.5 24.8 357 1-409 4-422 (422) 193 protein:vir:96179 Length: 468 98.3 1.7E-06 1E-09 52.3 21.8 378 1-416 11-468 (468) 194 protein:vir:97447 Length: 474 98.3 2E-06 1.2E-09 51.9 23.1 379 1-416 1-473 (474) 195 protein:vir:94498 Length: 474 98.3 2E-06 1.2E-09 51.9 23.1 379 1-416 1-473 (474) 196 protein:vir:105461 Length: 470 98.2 2.1E-06 1.3E-09 51.7 22.7 376 1-415 8-470 (470) 197 protein:vir:105292 Length: 478 98.2 2.4E-06 1.5E-09 51.4 25.5 377 1-415 29-478 (478) 198 protein:vir:4782 Length: 522 # 98.2 2.6E-06 1.6E-09 51.2 24.0 396 1-416 9-522 (522) 199 protein:vir:8184 Length: 474 # 98.2 2.8E-06 1.7E-09 51.0 24.9 383 1-413 22-474 (474) 200 protein:vir:94546 Length: 506 98.1 4E-06 2.5E-09 50.2 24.0 385 1-416 22-501 (506) 201 protein:vir:107112 Length: 478 98.1 4.9E-06 3E-09 49.7 23.8 376 1-416 29-477 (478) 202 protein:vir:99781 Length: 511 98.1 5.5E-06 3.4E-09 49.4 24.7 397 1-416 40-510 (511) 203 protein:vir:106571 Length: 499 98.0 6.8E-06 4.2E-09 48.9 26.2 386 1-416 16-494 (499) 204 protein:vir:96839 Length: 474 98.0 7.9E-06 4.9E-09 48.6 25.2 375 1-416 29-472 (474) 205 protein:vir:733 Length: 453 # 98.0 8.2E-06 5.1E-09 48.5 22.1 389 1-416 3-451 (453) 206 protein:vir:3028 Length: 500 # 97.9 1E-05 6.2E-09 48.0 26.2 382 1-416 1-495 (500) 207 protein:vir:9815 Length: 500 # 97.9 1E-05 6.2E-09 48.0 26.2 382 1-416 1-495 (500) 208 protein:vir:98883 Length: 517 97.9 1.1E-05 6.8E-09 47.8 23.8 403 1-415 1-517 (517) 209 protein:vir:96266 Length: 474 97.9 1.3E-05 8E-09 47.4 25.8 375 1-416 26-473 (474) 210 protein:vir:95899 Length: 474 97.9 1.3E-05 8E-09 47.4 25.8 375 1-416 26-473 (474) 211 protein:vir:78907 Length: 518 97.8 1.5E-05 9.2E-09 47.1 22.2 392 1-416 9-518 (518) 212 protein:vir:4073 Length: 279 # 97.8 3.4E-07 2.1E-10 56.0 9.2 268 45-381 1-279 (279) 213 protein:vir:1587 Length: 508 # 97.7 2.2E-05 1.4E-08 46.1 25.2 389 1-413 1-508 (508) 214 protein:vir:9568 Length: 410 # 97.7 2.3E-05 1.4E-08 46.1 28.7 348 4-411 1-410 (410) 215 protein:vir:79703 Length: 505 97.6 3.4E-05 2.1E-08 45.1 24.7 389 1-411 9-505 (505) 216 protein:vir:102950 Length: 471 97.5 4.8E-05 2.9E-08 44.3 24.3 371 1-416 9-470 (471) 217 protein:vir:78083 Length: 537 97.4 7.6E-05 4.7E-08 43.2 31.5 395 1-416 11-520 (537) 218 protein:vir:9922 Length: 489 # 97.1 0.00015 9.4E-08 41.5 23.5 396 1-416 1-487 (489) 219 protein:vir:97376 Length: 320 94.5 0.0022 1.4E-06 35.1 10.7 309 1-415 1-320 (320) 220 protein:vir:102239 Length: 527 93.7 0.0065 4.1E-06 32.6 23.3 390 1-416 1-522 (527) 221 protein:vir:101494 Length: 527 93.7 0.0066 4.1E-06 32.5 23.2 390 1-416 1-522 (527) 222 protein:vir:105154 Length: 525 91.8 0.014 8.8E-06 30.7 15.0 402 1-416 27-524 (525) 223 protein:vir:95149 Length: 501 91.2 0.017 1.1E-05 30.3 21.3 387 1-416 1-500 (501) 224 protein:vir:80453 Length: 535 90.8 0.019 1.2E-05 30.0 21.5 392 1-416 32-528 (535) 225 protein:vir:102330 Length: 451 90.4 0.021 1.3E-05 29.8 24.4 370 1-413 5-451 (451) 226 protein:vir:94956 Length: 452 90.0 0.023 1.4E-05 29.5 27.3 374 1-413 1-452 (452) 227 protein:vir:97265 Length: 513 87.9 0.036 2.2E-05 28.5 23.9 391 1-416 1-503 (513) 228 protein:vir:104500 Length: 537 87.3 0.04 2.5E-05 28.3 20.3 401 2-412 1-537 (537) 229 protein:vir:100598 Length: 516 85.4 0.053 3.3E-05 27.6 18.9 393 1-416 1-514 (516) 230 protein:vir:98265 Length: 524 83.7 0.066 4.1E-05 27.1 18.7 392 1-416 9-523 (524) 231 protein:vir:106999 Length: 564 80.4 0.096 5.9E-05 26.2 20.7 404 3-415 1-564 (564) 232 protein:vir:106282 Length: 521 80.1 0.098 6.1E-05 26.1 19.3 393 1-416 3-519 (521) 233 protein:vir:5665 Length: 511 # 78.5 0.11 7E-05 25.8 18.1 391 3-416 1-510 (511) 234 protein:vir:4995 Length: 384 # 78.0 0.12 7.4E-05 25.7 20.1 347 4-416 1-384 (384) 235 protein:vir:101806 Length: 516 74.9 0.15 9.5E-05 25.1 19.5 394 1-416 1-514 (516) 236 protein:vir:101189 Length: 516 74.9 0.15 9.5E-05 25.1 19.5 394 1-416 1-514 (516) 237 protein:vir:104892 Length: 558 73.3 0.17 0.00011 24.8 19.4 406 1-416 5-547 (558) 238 protein:vir:7208 Length: 524 # 73.0 0.18 0.00011 24.7 16.1 395 1-416 1-523 (524) 239 protein:vir:94709 Length: 522 72.3 0.18 0.00011 24.6 21.2 388 1-416 14-522 (522) 240 protein:vir:108049 Length: 524 67.6 0.25 0.00015 23.9 16.8 396 1-416 7-524 (524) 241 protein:vir:103458 Length: 524 66.3 0.27 0.00017 23.7 16.4 395 1-416 1-523 (524) 242 protein:vir:80165 Length: 651 64.4 0.3 0.00019 23.4 22.5 401 1-416 24-614 (651) 243 protein:vir:103177 Length: 533 63.8 0.31 0.00019 23.4 20.5 407 3-416 1-529 (533) 244 protein:vir:96783 Length: 488 62.8 0.33 0.0002 23.2 24.5 374 1-407 14-488 (488) 245 protein:vir:6896 Length: 523 # 61.0 0.36 0.00022 23.0 16.5 395 1-416 5-522 (523) 246 protein:vir:81017 Length: 521 59.6 0.39 0.00024 22.8 17.9 396 1-416 6-520 (521) 247 protein:vir:78696 Length: 542 59.2 0.4 0.00025 22.8 13.2 382 1-416 1-535 (542) 248 protein:vir:94599 Length: 641 52.7 0.55 0.00034 22.0 16.4 401 1-416 28-601 (641) 249 protein:vir:6596 Length: 521 # 50.0 0.62 0.00039 21.7 18.5 395 1-416 6-520 (521) 250 protein:vir:94572 Length: 535 45.7 0.76 0.00047 21.2 11.5 389 1-416 17-531 (535) 251 protein:vir:100039 Length: 522 43.8 0.83 0.00052 21.0 12.8 384 1-416 1-512 (522) 252 protein:vir:78393 Length: 489 38.9 1 0.00065 20.5 26.7 388 1-415 1-489 (489) 253 protein:vir:99672 Length: 532 38.4 1.1 0.00066 20.4 13.8 386 1-416 16-527 (532) 254 protein:vir:1538 Length: 535 # 34.1 1.3 0.00082 19.9 13.9 385 1-416 16-522 (535) 255 protein:vir:103765 Length: 549 30.9 1.5 0.00096 19.6 13.0 386 1-416 25-544 (549) 256 protein:vir:95014 Length: 491 28.8 1.7 0.0011 19.3 24.3 390 1-415 1-491 (491) 257 protein:vir:102668 Length: 547 27.8 1.8 0.0011 19.2 19.3 359 1-416 1-483 (547) 258 protein:vir:2198 Length: 536 # 24.2 2.2 0.0014 18.7 19.9 392 1-416 15-531 (536) 259 protein:vir:3361 Length: 535 # 21.6 2.6 0.0016 18.3 17.6 384 1-416 16-525 (535) 260 protein:vir:10447 Length: 536 20.3 2.8 0.0017 18.1 19.6 392 1-416 15-531 (536) No 1 >protein:vir:1266 Length: 416 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690758;genbank:gi:22854998;genbank:GeneID:955213 Probab=100.00 E-value=3.2e-114 Score=642.82 Aligned_cols=416 Identities=100% Similarity=1.488 Sum_probs=406.3 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |||+|+|++|+..+.....+.+.+.++|++..+.+++.++.+.++++++|++||++||++||++||++|+.++++..+.. T Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~Ia~~ia~l~~~~~~~~~~~~~~~~ 80 (416) T protein:vir:12 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) T ss_pred CccchhcccccCccccCccchhHHHHhhcCcccccCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCcccccc Confidence 99999999999999888889999999999999999999999999999999999999999999999999999888888889 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCeeE Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKAI 160 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~ 160 (416) +|+++++|+.+||++||+++||+.++.+++++||||+++.|+..|++.+|||++|++|++..+.+++.++|.+..++..+ T Consensus 81 ~~~l~~~l~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~~~~~~~~~g~~~ 160 (416) T protein:vir:12 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKAI 160 (416) T ss_pred ccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCcceEEEEeCCCcEEEEEEecCCeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888899 Q ss_pred EechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCC Q lcl|Aclame:pro 161 ELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVE 240 (416) Q Consensus 161 ~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~ 240 (416) .+++++|||+++++.++++|+||+..+..++....++.++..++|+||+.|+++++.++.+++++.+++++.|++..+++ T Consensus 161 ~~~~~eiih~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~e~~~~~~~~~~~~~~~~ 240 (416) T protein:vir:12 161 ELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVE 240 (416) T ss_pred EecCccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecCCCCCHHHHHHHHHHHHHHhcCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 241 NIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELN 320 (416) Q Consensus 241 ~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~ 320 (416) +++|+++|++|++++++++|++++|.+++++++||++|||||.+||..+.++++|.|++.+.|+++||.|++++||++|| T Consensus 241 ~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~~~l~P~~~~ie~~l~ 320 (416) T protein:vir:12 241 NIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELN 320 (416) T ss_pred CeeecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccccccccccc Q lcl|Aclame:pro 321 VKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQR 400 (416) Q Consensus 321 ~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~ 400 (416) ++|+++.++..|++++||++++++.|.+++++++.+++++|+||+||+|+++|+||+||||++++|+|+++++..++++. T Consensus 321 ~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~Pi~ggd~~~~~~n~~~~~~~~~~~~ 400 (416) T protein:vir:12 321 VKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQR 400 (416) T ss_pred HhhcCchhhcCCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccchhhc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccCCcccCCCCccCCC Q lcl|Aclame:pro 401 LKAGGAMKGGDNKNEG 416 (416) Q Consensus 401 ~~~~~~~~gge~~~~~ 416 (416) .++++..+|||++|+| T Consensus 401 ~~~~~~~~gge~~~~g 416 (416) T protein:vir:12 401 LKAGGAMKGGDNKNEG 416 (416) T ss_pred cccccccCCCCCcCCC Confidence 9999999999999999 No 2 >protein:vir:4509 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599035;genbank:gi:19548993;genbank:GeneID:935206 Probab=100.00 E-value=7.2e-103 Score=580.58 Aligned_cols=403 Identities=27% Similarity=0.484 Sum_probs=359.3 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |||+++|++++...... .......... +.+.+++.++.+.|+++++|++||++||++||++||++|+.+++++.+.. T Consensus 17 ~~~~~lf~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~vs~~~al~~~~v~~cv~~Ia~~iA~lp~~v~~~~~~~~~~~~ 93 (424) T protein:vir:45 17 VLLDALFRSKSLENPST-PITGDAVDTD--GLFRADVYVSPETAMKLAAVYSCIYVLSSSLAQMPLHVMRRHKGKVEPAR 93 (424) T ss_pred HHHHhhccccCCCCCcc-ccchhhhhhh--ccccCCceechHHhhccHHHHHHHHHHHHHHhhCceEEEEecCCceeecc Confidence 99999999876443332 2222223322 33556788999999999999999999999999999999998888888888 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCeeE Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKAI 160 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~ 160 (416) +||++++|+.+||++||+++||+.++.+++++||+|++|.|+..|++++|+|++|+.|++..+ ++.++|.+...++.. T Consensus 94 ~~~l~~lL~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~i~~~--~~~~~y~~~~~~~~~ 171 (424) T protein:vir:45 94 DHPAFYLVHDEPNTWQTSYKWRELKQRHILGWGNGYTWVKRNRRGEVISLDCCMPWETTLMNT--GGRYTYGLYNEYGAF 171 (424) T ss_pred cchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEecCceEEEEEc--CCeEEEEEEecCceE Confidence 999999999999999999999999999999999999999999999999999999999998654 445566666666778 Q ss_pred EechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhh--- Q lcl|Aclame:pro 161 ELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVN--- 237 (416) Q Consensus 161 ~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~--- 237 (416) .+++++|||+|+++.++++|+||+..+.++++...++++++.++|+||++|+++++.++.+++++.+++++.|++.+ T Consensus 172 ~~~~~eVih~r~~~~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~~~~~~g~ 251 (424) T protein:vir:45 172 AISPDDMIHIRALGNNQKMGLSPIMQHAETIGMGMSGQKYTESFFSGNARPAGIVSVKSGLNKESWGWLKDQWQKASQAL 251 (424) T ss_pred EECcccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHHHHHHHHHhccc Confidence 89999999999999999999999999999999999999999999999999999999999999999999999998654 Q ss_pred --cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 238 --KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNF 315 (416) Q Consensus 238 --~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i 315 (416) ++|+++|+++|++|++++++++|+|++|.+++++++||++|||||.+||..++++++|.|++.+.|+++||.|++++| T Consensus 252 ~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~eq~~~~f~~~tL~P~~~~i 331 (424) T protein:vir:45 252 RRQENKTMLLPADLDYKALTVSPVDAQIIDMMKLNRSMIAGIFNIPAHMINDLEKATFSNISAQAIQFVRYTMMPWVTNW 331 (424) T ss_pred cccCCceeEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHHHHHHH Confidence 467899999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccc Q lcl|Aclame:pro 316 EQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFL 395 (416) Q Consensus 316 ~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~ 395 (416) |++||++||++.++..|++++||++++++.|.+++++.+.+++++|+||+||+|+++|+||+||||++++|+|+.+.... T Consensus 332 e~~ln~kLl~~~e~~~g~~i~fd~~~llr~d~~~r~~~~~~~~~~g~~T~NE~R~~~gl~pi~ggD~~~~~~n~~~~~~~ 411 (424) T protein:vir:45 332 EQELNRRLFTRAELAAGYYVRFNLTGLLRGTPQERAQFYHFAITDGWMSRNEARAFEDMNPVEGLDEMLVSVNAANPAGD 411 (424) T ss_pred HHHHHHhcCChhhhcCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeecccccccccc Confidence 99999999999999889999999999999999999999999999999999999999999999999999999998764322 Q ss_pred cccccccCCcccCCCCccC Q lcl|Aclame:pro 396 EEYQRLKAGGAMKGGDNKN 414 (416) Q Consensus 396 ~~~~~~~~~~~~~gge~~~ 414 (416) ..+. ..++|++++ T Consensus 412 ~~~~------~~~~~~~~~ 424 (424) T protein:vir:45 412 FKPP------KNDEGKTNE 424 (424) T ss_pred cCCC------CCCCCCCCC Confidence 1111 122233333 No 3 >protein:vir:483 Length: 413 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543090;swissprot:trembl:q8w629;genbank:gi:18249902;uniprot:Q8W629;genbank:GeneID:929685 Probab=100.00 E-value=2.3e-102 Score=577.77 Aligned_cols=407 Identities=27% Similarity=0.464 Sum_probs=368.8 Q ss_pred CcchhhhccccccccccccchhHHHhhhcC-ccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGG-RKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) |||+++|+||+....... ..+.+.++. ..+.+++.++.+.|+++++|++||++||+++|++|+++++.+++++.+. T Consensus 1 ~~f~~~f~r~~~~~~~~~---~~~~~~~~~~~~~~~g~~v~~~~~l~~~~v~~~i~~Ia~~iA~~p~~~~~~~~~~~~~~ 77 (413) T protein:vir:48 1 MFFSGLFQRKSDAPVTTP---AELAEAIGLSYDTYTGKRISSQRAMRLTAVYSCVRVLAESVGMLPCSLYKISGTLKTRV 77 (413) T ss_pred CccchhhccCccCCccch---HHHHHhhhcCcccccCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCcceee Confidence 999999999875543322 234444443 4567888999999999999999999999999999999999998888888 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCee Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKA 159 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 159 (416) .+|+++++|+.+||++||+++||+.++.+++++||||+++.|+ .|+|.+|||++|++|++..+.++...|+.....+.. T Consensus 78 ~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~-~g~~~~L~~l~~~~v~~~~~~~~~~~y~~~~~~g~~ 156 (413) T protein:vir:48 78 VDERLHKLVSAKPNGYMTPQEFWELVIVCLCLRGNFYAYKVKA-LGEVVELLPIDPGCVEPKLNSQWQPVYQVTFPDGSV 156 (413) T ss_pred cccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCceEEEEEeC-CCcEEEEEEEcCceEEEEEcCCceEEEEEEecCceE Confidence 9999999999999999999999999999999999999999987 589999999999999999998887777666677778 Q ss_pred EEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhh-- Q lcl|Aclame:pro 160 IELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVN-- 237 (416) Q Consensus 160 ~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~-- 237 (416) ..+++++|||+++++.++++|+||+..+..+++...++.+++.++|+||++|+++++.++.+++++.+++++.|++.+ T Consensus 157 ~~~~~~evih~~~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~~~~~~~~g 236 (413) T protein:vir:48 157 DVLTQDEIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFGNGAVTSGVLRTEQKLTPDAYERLKKDFEERHTG 236 (413) T ss_pred EEEccccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHHhcC Confidence 889999999999999999999999999999999999999999999999999999999999999999999999998764 Q ss_pred --cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 238 --KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNF 315 (416) Q Consensus 238 --~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i 315 (416) ++|+++|+++|++|++++.+++|+|+.|.+++++++||++|||||.+||..++++++|.|++..+|+++||.|++++| T Consensus 237 ~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~n~e~~~~~f~~~~i~P~~~~i 316 (413) T protein:vir:48 237 LGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRI 316 (413) T ss_pred ccccCcceecCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcCCCcccHHHHHHHHHHHHHHHHHHHH Confidence 568899999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccc Q lcl|Aclame:pro 316 EQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFL 395 (416) Q Consensus 316 ~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~ 395 (416) +++||++|+++.+. .+++++||+++|++.|.+++++++++++++|+||+||+|+++|+||+||||++++|+|+++++.+ T Consensus 317 e~~l~~~L~~~~~~-~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p~~ggD~~~~~~n~~~~~~~ 395 (413) T protein:vir:48 317 EQRINTGLVRESKQ-GKFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTSPSA 395 (413) T ss_pred HHHHHhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeccccccccccc Confidence 99999999998775 58899999999999999999999999999999999999999999999999999999999988776 Q ss_pred cccccccCCcccCCCCccCCC Q lcl|Aclame:pro 396 EEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 396 ~~~~~~~~~~~~~gge~~~~~ 416 (416) ++... +..++|+.++.+ T Consensus 396 ~~~~~----~~~~~~~~~~~~ 412 (413) T protein:vir:48 396 GDDNG----KKKESGDADKTA 412 (413) T ss_pred cccCC----CCCCCCCccccC Confidence 54332 222344444444 No 4 >protein:vir:105064 Length: 421 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1465 # MgeName: phiKO2 # Cross-refs: genbank:acc:YP_006584;genbank:gi:46402090;genbank:GeneID:2777930 Probab=100.00 E-value=4.7e-102 Score=576.09 Aligned_cols=409 Identities=26% Similarity=0.433 Sum_probs=362.4 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCc-ceee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG-IERK 79 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~-~~~~ 79 (416) |||+++|+++..+.... .+...+...+....+.+++.|+.+.|+++++|++||++||++||++||++|+.++++ +.+. T Consensus 1 m~~~~~~~~~~~~~s~~-~~w~~~~~~~~~~~~~~g~~vt~~~al~~~~v~~~i~~Ia~~iA~lp~~~~~~~~~g~~~~~ 79 (421) T protein:vir:10 1 MFIPQMFEGKKRSVSGG-GFWEAMLGGVRSSHSKAGVMITPETALALSAVRACVTLLAESVAQLPVELYRRDKNGGRQRA 79 (421) T ss_pred CCCcchhcccccccCcc-hhhHHHhhhhccCcccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEEcCCCceeec Confidence 99999999775443322 333345556666777889999999999999999999999999999999999988665 4556 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCee Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKA 159 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 159 (416) .+|+++++|+.+||++||+++||+.++.+++++||||+++.|+..|+|.+|||++|+.|++..+.++..+ |++...+ T Consensus 80 ~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~v~~~~~g~~~-y~~~~~g-- 156 (421) T protein:vir:10 80 TDHPIYDLIHSQPNKKDTSFEYFEQQQGLLGLEGNCYSIIDRDGKGYPKELIPINPKKVIVLKGPDGMPY-YEIPEIG-- 156 (421) T ss_pred ccchHHHHHhhcccCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEecCceEEEEECCCceEE-EEEcCCC-- Confidence 7899999999999999999999999999999999999999999999999999999999999888776554 4454433 Q ss_pred EEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC----CHHHHHHHHHHHHH Q lcl|Aclame:pro 160 IELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL----DEKPKENVRKEWKR 235 (416) Q Consensus 160 ~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~----~~e~~~~~~~~~~~ 235 (416) ..+++++|||+++++.++++|+||+..+..+++...++++++.++|+||++|+++++.++.. ++++.+++++.|++ T Consensus 157 ~~~~~~eiih~~~~~~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~e~~~~~~~~~~~ 236 (421) T protein:vir:10 157 ETLPMRMMHHVKVFSLDGYIGSSPIQTNADVLGLNLAVEEHASAVFRRGATMSGVIERPKEAPAIKSQEKIDQLLAKWTD 236 (421) T ss_pred cEEchhhEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCccCccCCHHHHHHHHHHHHH Confidence 46899999999999999999999999999999999999999999999999999999987654 89999999999987 Q ss_pred hh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 236 VN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPW 311 (416) Q Consensus 236 ~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~ 311 (416) .+ ++++++||++|++|++++++++|+|++|.+++++++||++|||||.+||..+.+|++|.|++.+.|+++||.|+ T Consensus 237 ~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~~tl~P~ 316 (421) T protein:vir:10 237 RYSGINNMFSVALLQEGMSYKQMSQDNEKAQLLQSRQWGVEEVCRLYKIPPHMVQMLAKATNNNIEHQGLQFVMYTLLAW 316 (421) T ss_pred HhcCccccCcceecCCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCcCCccccHHHHHHHHHHHHHHHH Confidence 64 56789999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccc Q lcl|Aclame:pro 312 IVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVF 391 (416) Q Consensus 312 ~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~ 391 (416) +.+||++||++||++.+. .+++++||.+.+++.|.+++++++.+++++|+||+||+|+++|+||+||||++++|+|+++ T Consensus 317 ~~~ie~~ln~kL~~~~~~-~~~~v~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD~~~~~~n~~~ 395 (421) T protein:vir:10 317 LKRHEGALQRDLLLPSER-RDLYIEFNVSGLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLPPIAGGDKYLTPLNMVD 395 (421) T ss_pred HHHHHHHHhhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeecccccc Confidence 999999999999998775 5889999999999999999999999999999999999999999999999999999999998 Q ss_pred cccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 392 LDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 392 ~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ++.....+. +..+.+++|.++=+ T Consensus 396 ~~~~~~~~~--~~~~~~~~e~d~~~ 418 (421) T protein:vir:10 396 SAQIIPGDK--KPTAQQMAEIDTIL 418 (421) T ss_pred ccccccCCC--CcccccCccccccc Confidence 877654432 22233344433333 No 5 >protein:vir:102080 Length: 429 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512313;genbank:gi:89152482;genbank:GeneID:3953073 Probab=100.00 E-value=2.4e-101 Score=572.17 Aligned_cols=414 Identities=29% Similarity=0.496 Sum_probs=367.7 Q ss_pred Ccch-hhhc--cccc-cccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcc Q lcl|Aclame:pro 1 MLLE-RMFE--KRSG-SSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI 76 (416) Q Consensus 1 m~~~-~~f~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 76 (416) |.|. ++|+ +|.. ...........+..+++. +.++..++.+.|+++++|++||++||+++|++||++|+.+++++ T Consensus 1 M~~~~~~f~~~~r~~~~~~~~~~~~~~~~~~~g~--~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~l~~~~~~~~~~~~ 78 (429) T protein:vir:10 1 MDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGI--SPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYGI 78 (429) T ss_pred CchhhhhhcccccCcccccccCCChHHHHHHhcC--CCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEEecCCce Confidence 7665 6665 2332 222333345556666553 44677889999999999999999999999999999999998888 Q ss_pred eeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC-----cEEEE Q lcl|Aclame:pro 77 ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT-----GMLWY 151 (416) Q Consensus 77 ~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~-----~~~~~ 151 (416) .+..+|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|||++|++|++..++.+ ...+| T Consensus 79 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~~~~~~~~~~~~ 158 (429) T protein:vir:10 79 QRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMWY 158 (429) T ss_pred eeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEEE Confidence 8889999999999999999999999999999999999999999999999999999999999999887654 33466 Q ss_pred EEeeCCeeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHH Q lcl|Aclame:pro 152 QTVLNGKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVR 230 (416) Q Consensus 152 ~~~~~~~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~ 230 (416) .+...+..+.+++++|||++++ +.++++|+||+..+..+++...++.++..++|+||++|+++++.++.+++++.++++ T Consensus 159 ~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~l~~e~~~~~~ 238 (429) T protein:vir:10 159 VVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKKVFR 238 (429) T ss_pred EEccCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHHHH Confidence 7777777889999999999965 678899999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHH Q lcl|Aclame:pro 231 KEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRN 306 (416) Q Consensus 231 ~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~ 306 (416) +.|++.+ ++++++|+++|++|++++.+++|++++|.+++++++||++|||||.+||..++++++|.|++...|++. T Consensus 239 ~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~sn~e~~~~~f~~~ 318 (429) T protein:vir:10 239 ENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQFYTD 318 (429) T ss_pred HHHHHHhccccccCceeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHH Confidence 9998764 568899999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeec Q lcl|Aclame:pro 307 TLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISS 386 (416) Q Consensus 307 ~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~ 386 (416) ||.|++++|+++||++||++.++..+++++||++.+++.|.+++++.+.+++++|+||+||+|+++||||+||||++++| T Consensus 319 ~l~P~~~~ie~~ln~kl~~~~~~~~g~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD~~~~~ 398 (429) T protein:vir:10 319 TLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRLLVN 398 (429) T ss_pred HHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 387 LNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 387 ~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +|++|++..++.+......+.+++++-+|| T Consensus 399 ~n~~~~d~~~~~~~k~g~~~~~~~~~~~e~ 428 (429) T protein:vir:10 399 GNMLPIDMAGQAYLKGGDTNGEVSKEGNEG 428 (429) T ss_pred ccccchhhccccccCCCCCCCCCCCCCCCC Confidence 999999887664433222233333344444 No 6 >protein:vir:102118 Length: 409 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699943;genbank:gi:110804051;genbank:GeneID:4206661 Probab=100.00 E-value=1.5e-101 Score=573.31 Aligned_cols=399 Identities=34% Similarity=0.568 Sum_probs=360.1 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |||++.|++++...... ...+...++. +.++..++.+.|+++++|++||++||+++|++||++|+.++ +..+.. T Consensus 1 m~f~~~~~~~~~~~~~~---~~~~~~~~g~--~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~-~~~~~~ 74 (409) T protein:vir:10 1 MLFRKGFKNQSQEISID---DKKILEWLGI--NPSETYVNGKSCLKQATVFGCIRILSDNISKLPIKIYQKKD-GIKRVP 74 (409) T ss_pred CcccccccCcCCCCCCC---hHHHHHHhcC--CcCcceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecC-Ceeecc Confidence 99999999877543322 2334555543 45677889999999999999999999999999999998654 455677 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCc-----EEEEE-Ee Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTG-----MLWYQ-TV 154 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~-----~~~~~-~~ 154 (416) +|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|||++|++|++..+.++. ..+|. .. T Consensus 75 ~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~V~v~~~~~~~~~~~~~~~y~~~~ 154 (409) T protein:vir:10 75 DHYLEYLLKLRPNPYMSSSDFWKCIEVQRNIYGNAYVALDFKKNGEIKGLYPLKSDGMKIFVDDTGLLNSENNVWYLYTD 154 (409) T ss_pred CchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCCceEEEEcCCccccccceEEEEEEe Confidence 8999999999999999999999999999999999999999999999999999999999998876543 22333 34 Q ss_pred eCCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 155 LNGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK 234 (416) Q Consensus 155 ~~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~ 234 (416) ..+..+.+++++|||+|+++.++++|+||+..+.+++....++.+++.++|+||++|+++++.++.+++++.+++++.|+ T Consensus 155 ~~g~~~~~~~~evih~r~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~~~~~~ 234 (409) T protein:vir:10 155 DLGQRHKFMSDEILHFKGLTADGLAGLSVIELLNHLIENGKSSETYLNNFFKNGLQVKGLVQYAGDLNPEAEEVFKENFE 234 (409) T ss_pred CCceeEEeccccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCHHHHHHHHHHHH Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999998 Q ss_pred Hhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHH Q lcl|Aclame:pro 235 RVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQP 310 (416) Q Consensus 235 ~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P 310 (416) +.+ ++++++|+++|++|++++.+++|+|++|.+++++++||++|||||.+||..+++++++.|++.+.|+++||.| T Consensus 235 ~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~e~~~~~f~~~~l~P 314 (409) T protein:vir:10 235 RMSSGLKNAHRIAMLPIGYKFEPISQKLVDAQFLENSQLTIRQIASVFGVKMHQLNDLDRATHSNITEQNREFYIDTLQS 314 (409) T ss_pred HHhccccccCCceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCccccHHHHHHHHHHHHHHH Confidence 764 5678999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcc Q lcl|Aclame:pro 311 WIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYV 390 (416) Q Consensus 311 ~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~ 390 (416) ++++||++||++||+..++..+++++||++++++.|.+++++.+.+++++|+||+||+|+++|+||+||||++++|+|++ T Consensus 315 ~~~~ie~~ln~kL~~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~lgl~p~~ggD~~~~~~n~~ 394 (409) T protein:vir:10 315 ILNMYELEINYKLFLISEIKNGFYSKFNVDTILRADIKTRYESYKEAIQNGFKTPNEIRELEEDEPLEGGDVLLINGNMI 394 (409) T ss_pred HHHHHHHHHHHhhcCchhccCCcEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeeccCcc Confidence 99999999999999999988999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccCCcccCCCCc Q lcl|Aclame:pro 391 FLDFLEEYQRLKAGGAMKGGDN 412 (416) Q Consensus 391 ~~~~~~~~~~~~~~~~~~gge~ 412 (416) |++..++. ..+|||. T Consensus 395 ~~~~~~~~-------~~kgGe~ 409 (409) T protein:vir:10 395 PVKMAGEQ-------YSKGGEK 409 (409) T ss_pred chhhcccc-------ccccCCC Confidence 99876531 1255555 No 7 >protein:vir:1431 Length: 419 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536360;genbank:gi:17975165;genbank:GeneID:929165 Probab=100.00 E-value=1.1e-101 Score=574.08 Aligned_cols=408 Identities=25% Similarity=0.444 Sum_probs=364.8 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |||+|.+..+...+.... .+++..++++..+.+++.|+.+.|+++++|++||++||++||++||++|+.+++++.+.. T Consensus 1 ~~~~r~~~~~~~~~~~~~--~~~~~~~~g~~~s~~~~~vt~~~al~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~~~~~~ 78 (419) T protein:vir:14 1 MFFSRQLLSNLGQTQMSA--GGWVSALLGSSRSDSGQVVTPASALALTVLQNCVTLLAESIAQLPIELYERSGEDRKPAT 78 (419) T ss_pred CcccccccccccccccCc--chhhHHhhcCCCccCCcccchHHhhccHHHHHHHHHHHHhhccCceEEEEecCCcccccc Confidence 999998886665554433 345666777788889999999999999999999999999999999999999988888889 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCeeE Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKAI 160 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~ 160 (416) +|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|||++|+.|++..+.++..+| ++... . T Consensus 79 ~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~l~pl~~~~v~v~~~~~~~~~y-~~~~~---~ 154 (419) T protein:vir:14 79 DHPLYSILKYEPNSWQTPFEYQEQSQVAVGLRGNSYSFIDRDSDGVIQGLYPLDNEAVTVMRGSDLKPVY-RVRGS---D 154 (419) T ss_pred ccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCceEEEEECCCceEEE-EEccC---c Confidence 9999999999999999999999999999999999999999999999999999999999999887766544 44322 2 Q ss_pred EechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC----CHHHHHHHHHHHHHh Q lcl|Aclame:pro 161 ELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL----DEKPKENVRKEWKRV 236 (416) Q Consensus 161 ~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~----~~e~~~~~~~~~~~~ 236 (416) .++.++|+|+++++.++++|+||+..+..+++...++.+++.++|+||++|+++++.++.. ++++.+++++.|++. T Consensus 155 ~~~~~~i~h~~~~~~dg~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (419) T protein:vir:14 155 PMPQRLVHHVRWMSINGYTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPKDAPALKDQASVDRITDGWNAK 234 (419) T ss_pred ccchhheeEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCcccCHHHHHHHHHHHHHH Confidence 4789999999999999999999999999999999999999999999999999999988655 588889999999876 Q ss_pred h----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 237 N----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWI 312 (416) Q Consensus 237 ~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~ 312 (416) + ++++++|+++|++|++++++++|+|++|.+++++++||++|||||.+||..+++++++.|++++.|+++||.|++ T Consensus 235 ~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~t~s~~E~~~~~f~~~~L~P~~ 314 (419) T protein:vir:14 235 FGGSGNAKKVALLQEGMTFRPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELERATFSNIEHQSLQFVIYTLLPWV 314 (419) T ss_pred hcCccccCCceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCCCCcccHHHHHHHHHHHHHHHHH Confidence 4 568899999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccc Q lcl|Aclame:pro 313 VNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFL 392 (416) Q Consensus 313 ~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~ 392 (416) ++||++||++||++.++ .+++++||+++|++.|.+++++++.+++++|+||+||+|+++|+||+||||++++|+|++++ T Consensus 315 ~~ie~~l~~kll~~~~~-~~~~i~fd~~~l~r~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~gGD~~~~~~n~~~~ 393 (419) T protein:vir:14 315 KRHEQAKTRDLLLPSER-KQYFIEYNLAGLLRGDQSSRYAAYAVGRQWGWLSINDIRRLENMPPVKGGDIYLSPMNMVDA 393 (419) T ss_pred HHHHHHHhhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeeccccccc Confidence 99999999999998775 57899999999999999999999999999999999999999999999999999999999998 Q ss_pred ccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 393 DFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 393 ~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +.++..+..+. +..++++.++.- T Consensus 394 ~~~~~~~~~~~-~~~~~~~~e~~~ 416 (419) T protein:vir:14 394 SKPQQLPVGKS-EPTKAAIDEIGR 416 (419) T ss_pred cccccccCCCC-CCccccccchhc Confidence 87765433333 222333333333 No 8 >protein:vir:107605 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338186;genbank:gi:77020175;genbank:GeneID:3703736 Probab=100.00 E-value=1.5e-100 Score=567.82 Aligned_cols=414 Identities=30% Similarity=0.507 Sum_probs=364.9 Q ss_pred Ccchh-h-----hcccccccc-ccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 MLLER-M-----FEKRSGSSD-HEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~~~~-~-----f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) |.|.. + |++|+.... ........+...++ .+.+++.++.+.|+++++|++||++||+++|++||++++.++ T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g--~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~ 78 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG--ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhC--CCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecC Confidence 65543 2 344543332 22333445555554 345677889999999999999999999999999999999998 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC-----cE Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT-----GM 148 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~-----~~ 148 (416) +++.+..+|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|||++|++|++..++.+ .. T Consensus 79 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~ 158 (432) T protein:vir:10 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) T ss_pred CceeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccce Confidence 8888889999999999999999999999999999999999999999999999999999999999999887543 34 Q ss_pred EEEEEeeCCeeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHH Q lcl|Aclame:pro 149 LWYQTVLNGKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKE 227 (416) Q Consensus 149 ~~~~~~~~~~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~ 227 (416) .+|.+...+..+.+++++|||++++ +.++++|+||+..+..++....++.+++.++|+||++|+++++.++.+++++.+ T Consensus 159 ~~y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~ 238 (432) T protein:vir:10 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 238 (432) T ss_pred EEEEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHH Confidence 5677777778889999999999965 678999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHH Q lcl|Aclame:pro 228 NVRKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEY 303 (416) Q Consensus 228 ~~~~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f 303 (416) ++++.|++.+ ++++++|+++|++|++++++++|++++|.+++++++||++|||||.+||..+++++++.|++..+| T Consensus 239 ~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~~ 318 (432) T protein:vir:10 239 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQF 318 (432) T ss_pred HHHHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHH Confidence 9999998764 568899999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeE Q lcl|Aclame:pro 304 VRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKY 383 (416) Q Consensus 304 ~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~ 383 (416) +++||+|++++||++||++||+..++..+++++||.++|++.|.+++++++.+++++|++|+||+|+++||||+||||++ T Consensus 319 ~~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~ggD~~ 398 (432) T protein:vir:10 319 YTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL 398 (432) T ss_pred HHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 384 ISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 384 ~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ++|+|++|++..++.+.....++.+++++-+|| T Consensus 399 ~~~~n~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 431 (432) T protein:vir:10 399 LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG 431 (432) T ss_pred eecccccchhhccccccCCCCCCCCCCCCCCCC Confidence 999999999887664332221222222222333 No 9 >protein:vir:102855 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338135;genbank:gi:77020228;genbank:GeneID:3703764 Probab=100.00 E-value=1.5e-100 Score=567.82 Aligned_cols=414 Identities=30% Similarity=0.507 Sum_probs=364.9 Q ss_pred Ccchh-h-----hcccccccc-ccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 MLLER-M-----FEKRSGSSD-HEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~~~~-~-----f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) |.|.. + |++|+.... ........+...++ .+.+++.++.+.|+++++|++||++||+++|++||++++.++ T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g--~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~ 78 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG--ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhC--CCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecC Confidence 65543 2 344543332 22333445555554 345677889999999999999999999999999999999998 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC-----cE Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT-----GM 148 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~-----~~ 148 (416) +++.+..+|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|||++|++|++..++.+ .. T Consensus 79 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~ 158 (432) T protein:vir:10 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) T ss_pred CceeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccce Confidence 8888889999999999999999999999999999999999999999999999999999999999999887543 34 Q ss_pred EEEEEeeCCeeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHH Q lcl|Aclame:pro 149 LWYQTVLNGKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKE 227 (416) Q Consensus 149 ~~~~~~~~~~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~ 227 (416) .+|.+...+..+.+++++|||++++ +.++++|+||+..+..++....++.+++.++|+||++|+++++.++.+++++.+ T Consensus 159 ~~y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~ 238 (432) T protein:vir:10 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 238 (432) T ss_pred EEEEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHH Confidence 5677777778889999999999965 678999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHH Q lcl|Aclame:pro 228 NVRKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEY 303 (416) Q Consensus 228 ~~~~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f 303 (416) ++++.|++.+ ++++++|+++|++|++++++++|++++|.+++++++||++|||||.+||..+++++++.|++..+| T Consensus 239 ~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~~ 318 (432) T protein:vir:10 239 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQF 318 (432) T ss_pred HHHHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHH Confidence 9999998764 568899999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeE Q lcl|Aclame:pro 304 VRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKY 383 (416) Q Consensus 304 ~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~ 383 (416) +++||+|++++||++||++||+..++..+++++||.++|++.|.+++++++.+++++|++|+||+|+++||||+||||++ T Consensus 319 ~~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~ggD~~ 398 (432) T protein:vir:10 319 YTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL 398 (432) T ss_pred HHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 384 ISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 384 ~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ++|+|++|++..++.+.....++.+++++-+|| T Consensus 399 ~~~~n~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 431 (432) T protein:vir:10 399 LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG 431 (432) T ss_pred eecccccchhhccccccCCCCCCCCCCCCCCCC Confidence 999999999887664332221222222222333 No 10 >protein:vir:105002 Length: 432 # NCBI annotation: putative phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459967;genbank:gi:85701382;genbank:GeneID:3882143 Probab=100.00 E-value=1.5e-100 Score=567.82 Aligned_cols=414 Identities=30% Similarity=0.507 Sum_probs=364.9 Q ss_pred Ccchh-h-----hcccccccc-ccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 MLLER-M-----FEKRSGSSD-HEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~~~~-~-----f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) |.|.. + |++|+.... ........+...++ .+.+++.++.+.|+++++|++||++||+++|++||++++.++ T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g--~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~ 78 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLG--ISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDE 78 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhC--CCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecC Confidence 65543 2 344543332 22333445555554 345677889999999999999999999999999999999998 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC-----cE Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT-----GM 148 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~-----~~ 148 (416) +++.+..+|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|||++|++|++..++.+ .. T Consensus 79 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~ 158 (432) T protein:vir:10 79 YGIQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTK 158 (432) T ss_pred CceeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccce Confidence 8888889999999999999999999999999999999999999999999999999999999999999887543 34 Q ss_pred EEEEEeeCCeeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHH Q lcl|Aclame:pro 149 LWYQTVLNGKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKE 227 (416) Q Consensus 149 ~~~~~~~~~~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~ 227 (416) .+|.+...+..+.+++++|||++++ +.++++|+||+..+..++....++.+++.++|+||++|+++++.++.+++++.+ T Consensus 159 ~~y~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~ 238 (432) T protein:vir:10 159 MWYVVNTGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 238 (432) T ss_pred EEEEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHH Confidence 5677777778889999999999965 678999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHH Q lcl|Aclame:pro 228 NVRKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEY 303 (416) Q Consensus 228 ~~~~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f 303 (416) ++++.|++.+ ++++++|+++|++|++++++++|++++|.+++++++||++|||||.+||..+++++++.|++..+| T Consensus 239 ~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~~~ 318 (432) T protein:vir:10 239 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQF 318 (432) T ss_pred HHHHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHH Confidence 9999998764 568899999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeE Q lcl|Aclame:pro 304 VRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKY 383 (416) Q Consensus 304 ~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~ 383 (416) +++||+|++++||++||++||+..++..+++++||.++|++.|.+++++++.+++++|++|+||+|+++||||+||||++ T Consensus 319 ~~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~ggD~~ 398 (432) T protein:vir:10 319 YTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL 398 (432) T ss_pred HHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 384 ISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 384 ~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ++|+|++|++..++.+.....++.+++++-+|| T Consensus 399 ~~~~n~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 431 (432) T protein:vir:10 399 LVNGNMLPIDMAGQAYLKGGDTNGEVSKEGNEG 431 (432) T ss_pred eecccccchhhccccccCCCCCCCCCCCCCCCC Confidence 999999999887664332221222222222333 No 11 >protein:vir:81072 Length: 432 # NCBI annotation: p07 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285677;genbank:gi:148727185;genbank:GeneID:5247117 Probab=100.00 E-value=1.2e-100 Score=568.32 Aligned_cols=414 Identities=21% Similarity=0.310 Sum_probs=362.5 Q ss_pred Ccc-hh---hhcccccccccccc---chhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 MLL-ER---MFEKRSGSSDHEDG---FNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~~-~~---~f~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) |.| +| .|++++..+..... ..+.....++...+.+++.|+.+.|+++++|++||++||+++|++|+++|+.++ T Consensus 7 mg~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~V~~~i~~Ia~~ia~lp~~~y~~~~ 86 (432) T protein:vir:81 7 LGLFGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAIAAMPLTMYMRTP 86 (432) T ss_pred cchhhhhhhhcccccccccccccccccCccchhhhcccccccCcccchHhhhccHHHHHHHHHHHHhhhhCceeeEEecC Confidence 544 44 45544432211100 111223334555677889999999999999999999999999999999999988 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEE Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQT 153 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~ 153 (416) +|+.+..+||++++|+.+||++||+++||+.++.+++++||||+++.++ .|++.+|||++|+.|++..+.+|...|+.+ T Consensus 87 ~g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnayv~i~~~-~g~~~~L~~l~~~~v~v~~~~~g~~~y~~~ 165 (432) T protein:vir:81 87 DGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDPKGNTAYRYR 165 (432) T ss_pred CcceecccchHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCCceEEEECCCCcEEEEEE Confidence 8888889999999999999999999999999999999999999999987 499999999999999999998887777666 Q ss_pred eeCCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 154 VLNGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEW 233 (416) Q Consensus 154 ~~~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~ 233 (416) ..++..+.+++++|+|+|+++.++++|+||+..+.+++....+++++..++|+||++|+++++.++.+++++.+++++.| T Consensus 166 ~~~g~~~~~~~~~iih~r~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~~~~~ 245 (432) T protein:vir:81 166 RTDGQMIDIPKQQIWKIMGYSLDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDDQYDSFAKKV 245 (432) T ss_pred ecCceEEEEccccEEEecCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCCCCHHHHHHHHHHH Confidence 67778889999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc---ccHHHHHHHHHHHHHHH Q lcl|Aclame:pro 234 KRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF---SNIEHQSIEYVRNTLQP 310 (416) Q Consensus 234 ~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~---s~~e~~~~~f~~~~l~P 310 (416) ++..++|+++||++|++|++++++++|++++|.+++++++||++|||||.+||..+.+++ ++.|++.+.|+++||.| T Consensus 246 ~~~~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~sn~eq~~~~f~~~tl~P 325 (432) T protein:vir:81 246 SGSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQLGFLTMTLSP 325 (432) T ss_pred hhhhcCCCceecCCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCccccccchHHHHHHHHHHHHHHH Confidence 999999999999999999999999999999999999999999999999999999887655 78899999999999999 Q ss_pred HHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC-eEeeccCc Q lcl|Aclame:pro 311 WIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD-KYISSLNY 389 (416) Q Consensus 311 ~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd-~~~~~~n~ 389 (416) +++.||++|+++|+++.+. .+++++||++.|++.|.+++++++.+++++|+||+||+|+++|+||+|||| .+++++|+ T Consensus 326 ~~~~ie~~l~~kLl~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~t~NE~R~~~glpp~~g~~~~~~~~~~~ 404 (432) T protein:vir:81 326 WLRRIEQSIALNLLSPAER-RRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGGNAAVLTVQSAM 404 (432) T ss_pred HHHHHHHHHHhhccCcccc-CceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCCcceEeecCcc Confidence 9999999999999998775 478999999999999999999999999999999999999999999999875 55689999 Q ss_pred cccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 390 VFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 390 ~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +|++........+..+..+..++++.+ T Consensus 405 ~pl~~~~~~~~~~~~~~~~n~~~~~~~ 431 (432) T protein:vir:81 405 VPLDSIGLQASPEPASGLGNQQQDKVS 431 (432) T ss_pred cchhhhccCCCCCCCCCCCCccccccc Confidence 999877654433332223333444444 No 12 >protein:vir:4454 Length: 414 # NCBI annotation: Portal Protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700377;genbank:gi:23505449;genbank:GeneID:955656 Probab=100.00 E-value=2.5e-100 Score=566.59 Aligned_cols=407 Identities=26% Similarity=0.467 Sum_probs=360.6 Q ss_pred CcchhhhccccccccccccchhHHHhhhc-CccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFG-GRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) +||+++|++++........ .+...++ +..+.++..++.+.|+++++|++||++||+++|++||++|+.+++++.+. T Consensus 2 g~f~~lf~r~~~~~~~~~~---~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~Ia~~ia~~p~~~~~~~~~~~~~~ 78 (414) T protein:vir:44 2 VFFSGLFQRKSDAPVTTPA---ELADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLKQRA 78 (414) T ss_pred chhhhhhccCccCcccchh---hHhHhhccCccccCCceechhhhhccHHHHHHHHHHHHHhccCceEEEEecCCceeec Confidence 6777899987754432221 2333333 44566888899999999999999999999999999999999998888888 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCee Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKA 159 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 159 (416) .+|+++++|+.+||++||+++||+.++.+++++||||+++.|+ .|++.+|||++|+.|++..+.++...|+.....+.. T Consensus 79 ~~~~~~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gna~~~i~~~-~g~~~~L~~l~~~~v~~~~~~~~~~~y~~~~~~g~~ 157 (414) T protein:vir:44 79 TGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKA-FGEVAELLPVDPGCVVPKLNSSWEPVYQVTFPDGST 157 (414) T ss_pred ccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCceEEEEECCCCcEEEEEEecCceE Confidence 8999999999999999999999999999999999999999887 599999999999999999988887777776677778 Q ss_pred EEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhh-- Q lcl|Aclame:pro 160 IELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVN-- 237 (416) Q Consensus 160 ~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~-- 237 (416) ..+++++|||+++++.++++|+||+..+..+++...++.++..++|+||++|+++++.++.+++++.+++++.|++.. T Consensus 158 ~~~~~~evih~~~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~~~~~~g 237 (414) T protein:vir:44 158 DVLSQEDIWHVRTLTLDGLVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKKDFEERHTG 237 (414) T ss_pred EEEccccEEEecCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCHHHHHHHHHHHHHHhcC Confidence 899999999999998899999999999999999999999999999999999999999999999999999999998654 Q ss_pred --cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 238 --KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNF 315 (416) Q Consensus 238 --~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i 315 (416) ++++++|+++|++|++++.+++|++++|.+++++++||++|||||.+||..++++++|.|++...|+++||+|++++| T Consensus 238 ~~n~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~~~~~~t~~n~e~~~~~~~~~~l~P~~~~i 317 (414) T protein:vir:44 238 LGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYSLVPYLTRI 317 (414) T ss_pred ccccCcceecCCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHHHHHHH Confidence 567899999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccc Q lcl|Aclame:pro 316 EQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFL 395 (416) Q Consensus 316 ~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~ 395 (416) |++||++|+++.++ .+++++||.++|++.|.+++++.+++++++|+||+||+|+++|+||+||||++++|+|+...... T Consensus 318 e~~ln~~L~~~~~~-~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~~ggD~~~~~~n~~~~~~~ 396 (414) T protein:vir:44 318 EQRINTGLVRKSKQ-GVFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMNMTTKPSD 396 (414) T ss_pred HHHHHhhcCCcccc-CceEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceecccccccccCCc Confidence 99999999998875 47899999999999999999999999999999999999999999999999999999998765432 Q ss_pred cccccccCCcccCCCCccCCC Q lcl|Aclame:pro 396 EEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 396 ~~~~~~~~~~~~~gge~~~~~ 416 (416) .. +.++..+.++.+..+ T Consensus 397 ~~----~~~~~~~~~~~d~~~ 413 (414) T protein:vir:44 397 GS----KAGKQKDNANADETT 413 (414) T ss_pred cc----cCCCCCCCCCCCCCC Confidence 21 111111111111111 No 13 >protein:vir:97060 Length: 432 # NCBI annotation: putative head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453563;genbank:gi:84662598;genbank:GeneID:5142475 Probab=100.00 E-value=3.3e-100 Score=565.97 Aligned_cols=414 Identities=21% Similarity=0.304 Sum_probs=359.5 Q ss_pred Ccchhh---hcccccccc---ccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCC Q lcl|Aclame:pro 1 MLLERM---FEKRSGSSD---HEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDG 74 (416) Q Consensus 1 m~~~~~---f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 74 (416) +||.|+ |.+++.... ......+.....++...+.+++.|+.+.|+++++|++||++||++||++||++|+.+++ T Consensus 8 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~a~~~~aV~~~v~~Ia~~ia~lp~~~y~~~~~ 87 (432) T protein:vir:97 8 GLLGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAVAAMPLMMYMRTPD 87 (432) T ss_pred chhhhhHhhcCCccccccccccccccCchhhhhhcccccccCcccchHhhhcchHHHHHHHHHHHhhccCceEEEEecCC Confidence 445442 332222111 00011122233345556778999999999999999999999999999999999999988 Q ss_pred cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEe Q lcl|Aclame:pro 75 GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTV 154 (416) Q Consensus 75 ~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 154 (416) |+.+..+||++++|+.+||++||+++||+.++.+++++||||+++.|+ .|++.+|||++|+.|++..+.+|...|+.+. T Consensus 88 g~~~~~~~pl~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~-~g~~~~L~~l~p~~v~v~~~~~g~~~y~~~~ 166 (432) T protein:vir:97 88 GRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDTKGNTAYRYRR 166 (432) T ss_pred CcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCcceEEEEcCCCcEEEEEEe Confidence 888889999999999999999999999999999999999999999997 4999999999999999999888877766666 Q ss_pred eCCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 155 LNGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK 234 (416) Q Consensus 155 ~~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~ 234 (416) .++..+.+++++|||+|+++.++++|+||+..+..++....++.++..++|+||++|+++++.++.+++++++++++.|. T Consensus 167 ~~g~~~~~~~~~iih~r~~~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~~~~~~ 246 (432) T protein:vir:97 167 TDGQMIDIPRQQIWKIMGYSLDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDDQYDSFSKKVS 246 (432) T ss_pred cCceEEEEccccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeEecCCCCCHHHHHHHHHHHh Confidence 67778899999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc---ccHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 235 RVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF---SNIEHQSIEYVRNTLQPW 311 (416) Q Consensus 235 ~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~---s~~e~~~~~f~~~~l~P~ 311 (416) +..++++++||++|++|++++++++|+|++|.+++++++||++|||||.+||..+.+++ ++.|++.+.|+++||.|+ T Consensus 247 ~~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~~s~~e~~~~~f~~~tl~P~ 326 (432) T protein:vir:97 247 GSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQLGFLTMTLSPW 326 (432) T ss_pred hhhcCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCcccccchhHHHHHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999999998877655 788999999999999999 Q ss_pred HHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCe-EeeccCcc Q lcl|Aclame:pro 312 IVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDK-YISSLNYV 390 (416) Q Consensus 312 ~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~-~~~~~n~~ 390 (416) ++.||++||++|+++.+. .+++++||++.+++.|.+++++++.+++++|+||+||+|+++||||++|||. ++++.|++ T Consensus 327 ~~~ie~~ln~kLl~~~e~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~glpp~~g~~~~~~~~~~~~ 405 (432) T protein:vir:97 327 LRRIEQSIALNLLTPAER-RRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGGNAAVLTVQSAMV 405 (432) T ss_pred HHHHHHHHhhhccCcccc-CceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCCcceEeeccccc Confidence 999999999999998775 5789999999999999999999999999999999999999999999998765 45899999 Q ss_pred ccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 391 FLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 391 ~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) |++........+.++.....++++.+ T Consensus 406 pl~~~~~~~~~~~~~~~~~~~~~~~~ 431 (432) T protein:vir:97 406 PLDSIGLQASPEPASGLGNQQQDKVS 431 (432) T ss_pred chhhhcccCCCCCCCCCCCccccccc Confidence 99887653332222222223333333 No 14 >protein:vir:80333 Length: 419 # NCBI annotation: gp4, phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111083;genbank:gi:134288632;genbank:GeneID:4960580 Probab=100.00 E-value=2.2e-100 Score=566.97 Aligned_cols=409 Identities=26% Similarity=0.453 Sum_probs=359.6 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |||+|.+.+....+. ....+++..++++..+.+++.|+.+.|+++++|++||++||+++|++||++|+.+++++.+.. T Consensus 1 m~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~s~~~~~v~~~~al~~~~v~~cv~~ia~~ia~lp~~~~~~~~~~~~~~~ 78 (419) T protein:vir:80 1 MFFSRQLLSNLGQTQ--PGSGGWVSALLGSARSEAGQVVTPASALSLTVLQNCVTLLAESIAQLPVELYERSGDDRKPAT 78 (419) T ss_pred CCcccccccccCcCC--CCcchhhHHhhcccccccCcccChHHhhccHHHHHHHHHHHHhhccCceEEEEecCCCccccc Confidence 999998765443333 334566778888888889999999999999999999999999999999999999998888888 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCeeE Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKAI 160 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~ 160 (416) +|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|+|.+|||++|++|++..+.++...|+ +. ... T Consensus 79 ~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~~i~~~~v~i~~~~~~~~~y~-~~---~~~ 154 (419) T protein:vir:80 79 DHPLYSILKYEPNPWQTPFEYQEQSQVAVGLRGNSYSFIDRDQDGVIQGLYPLDNEAVTVMKGPDLKPMYR-VA---GAD 154 (419) T ss_pred ccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCceEEEEECCCceEEEE-Ec---Ccc Confidence 99999999999999999999999999999999999999999999999999999999999998877665443 32 223 Q ss_pred EechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCc----CCHHHHHHHHHHHHHh Q lcl|Aclame:pro 161 ELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAF----LDEKPKENVRKEWKRV 236 (416) Q Consensus 161 ~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~----~~~e~~~~~~~~~~~~ 236 (416) .+++++|+|+++++.++++|+||+..+..++....++.++..++|+||++|+++++.++. .++++.+++++.|++. T Consensus 155 ~~~~~~i~h~~~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (419) T protein:vir:80 155 PLPQRLVHHVRWMSINGYTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPTDAPALKDQASVDRITDGWNAK 234 (419) T ss_pred ccchhheEEecCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCHHHHHHHHHHHHHH Confidence 588999999999999999999999999999999999999999999999999999998654 4788889999998865 Q ss_pred h----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 237 N----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWI 312 (416) Q Consensus 237 ~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~ 312 (416) + ++|+++||++|++|+++++++.|++++|.+++++++||++|||||.+||..+++|++|.|++.+.|+++||.|++ T Consensus 235 ~~g~~n~g~~~vl~~g~~~~~l~~s~~d~q~~e~~~~~~~~Ia~~fgVPp~llg~~~~~t~~n~e~~~~~f~~~~l~P~~ 314 (419) T protein:vir:80 235 FGGSGNAKKVALLQEGMKFKPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELERATFSNIEHQSLQFVIYTLLPWV 314 (419) T ss_pred hcCccccCCceecCCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCCCCcccHHHHHHHHHHHHHHHHH Confidence 4 568899999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccc Q lcl|Aclame:pro 313 VNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFL 392 (416) Q Consensus 313 ~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~ 392 (416) ++||++|+++||++.++ .+++++||++++++.|.+++++.+++++++|+||+||+|+++|+||+||||++++|+|++++ T Consensus 315 ~~ie~~l~~kll~~~~~-~~~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~gGD~~~~~~n~~~~ 393 (419) T protein:vir:80 315 KRHEQAKTRDLLLPSER-KQYFIEYNLAGLLRGDQSSRYAAYAVGRQWGWLSINDIRRLENMPPVKGGDIYLSPMNMVDA 393 (419) T ss_pred HHHHHHHhhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccc Confidence 99999999999998775 57899999999999999999999999999999999999999999999999999999999887 Q ss_pred ccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 393 DFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 393 ~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +.+...+..+..++...-+...+- T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~ 417 (419) T protein:vir:80 394 SKPQPIPMGKTEPTKAALDEIGRI 417 (419) T ss_pred cccccccCCCCCchhhhHHHHHhh Confidence 665433222111111000000000 No 15 >protein:vir:10362 Length: 432 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858954;genbank:gi:32128419;genbank:GeneID:2648396 Probab=100.00 E-value=6.2e-100 Score=564.49 Aligned_cols=413 Identities=21% Similarity=0.308 Sum_probs=358.2 Q ss_pred Ccchhh---hcccccccc----ccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 MLLERM---FEKRSGSSD----HEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~~~~~---f~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) ++|.|+ |.+++.... ..... +.....++...+.++..|+.+.|+++++|++||++||++||++||++|+.++ T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~g~~v~~~~al~~~~V~~~i~~Ia~~ia~lp~~~y~~~~ 86 (432) T protein:vir:10 8 GLLGQLKAMFVPPDPVDIGGGQTFTPV-NATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAIAAMPLTMYMRTP 86 (432) T ss_pred chhhhhHhhcCCccccccccccccccC-cchhhhhcccccccCcccchhhhhcchHHHHHHHHHHHhhhhCceeEEEecC Confidence 445442 333222111 01111 2222333445677889999999999999999999999999999999999998 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEE Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQT 153 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~ 153 (416) +++.+..+||++++|+.+||++||+++||+.++.+++++||||+++.|+ .|++.+|||++|+.|++..+.+|...|+.+ T Consensus 87 ~g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~-~g~~~~L~~l~~~~v~v~~~~~g~~~y~~~ 165 (432) T protein:vir:10 87 DGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDTKGNTAYRYR 165 (432) T ss_pred CCcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCCceEEEEcCCCcEEEEEE Confidence 8888889999999999999999999999999999999999999999997 599999999999999999988887777666 Q ss_pred eeCCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 154 VLNGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEW 233 (416) Q Consensus 154 ~~~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~ 233 (416) ..++..+.+++++|||+++++.++++|+||+..+.+++....+++++..++|+||++|+++++.++.+++++.+++++.| T Consensus 166 ~~~g~~~~~~~~~iih~~~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~~~~~ 245 (432) T protein:vir:10 166 RTDGQMIDIPKQQIWKIMGYSLDGENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTDDQYDSFAKKV 245 (432) T ss_pred ecCceEEEEcCccEEEecCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCCCCHHHHHHHHHHH Confidence 67778889999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc---ccHHHHHHHHHHHHHHH Q lcl|Aclame:pro 234 KRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF---SNIEHQSIEYVRNTLQP 310 (416) Q Consensus 234 ~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~---s~~e~~~~~f~~~~l~P 310 (416) ++..++++++||++|++|++++++++|+|++|.+++++++||++|||||.+||..+.+++ +|.|++.+.|+++||.| T Consensus 246 ~~~~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~~~~~t~~~~sn~e~~~~~f~~~tl~P 325 (432) T protein:vir:10 246 SGSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQLGFLSMTLSP 325 (432) T ss_pred hhhhhCCCceecCCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCcccccchHHHHHHHHHHHHHHH Confidence 999999999999999999999999999999999999999999999999999998877654 78999999999999999 Q ss_pred HHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC-eEeeccCc Q lcl|Aclame:pro 311 WIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD-KYISSLNY 389 (416) Q Consensus 311 ~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd-~~~~~~n~ 389 (416) +++.||++||++|+++.+. .+++++||++++++.|.+++++++.+++++|+||+||+|+++||||+|||| .++++.|+ T Consensus 326 ~~~~ie~~ln~kL~~~~~~-~~~~~~fd~~~ll~~d~~~r~~~~~~~~~~G~~T~NE~R~~~glppi~g~~~~~~~~~~~ 404 (432) T protein:vir:10 326 WLRRIEQSIALNLLSPAER-RRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGGNAAVLTVQSAM 404 (432) T ss_pred HHHHHHHHHHhhhcCcccc-CceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCCcceEeecCcc Confidence 9999999999999998765 468999999999999999999999999999999999999999999999875 45689999 Q ss_pred cccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 390 VFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 390 ~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +|++........+.....+..++++.+ T Consensus 405 ~pl~~~~~~~~~~~~~~~~~~~~~~~~ 431 (432) T protein:vir:10 405 VPLDSIGLQASPEPASGLGNQQQDKVS 431 (432) T ss_pred cchhhhcccCCCCCCCCCCCccccccc Confidence 999877643332222222222222222 No 16 >protein:vir:4337 Length: 434 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061500;genbank:gi:9635589;genbank:GeneID:1262858 Probab=100.00 E-value=2e-99 Score=561.72 Aligned_cols=411 Identities=23% Similarity=0.337 Sum_probs=359.8 Q ss_pred Ccchhhhcccccc--------ccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeec Q lcl|Aclame:pro 1 MLLERMFEKRSGS--------SDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRT 72 (416) Q Consensus 1 m~~~~~f~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 72 (416) ++.+-+.+.++.. +......++.++..|.+..+.+++.|+.+.|+++++|++||++||++||++||++|+.+ T Consensus 4 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~v~~~~al~~~~V~~~i~~ia~~ia~lp~~~~~~~ 83 (434) T protein:vir:43 4 SLGKVLSSATSAPRSSLFGWGGKTIRLTDGAFWSQFLGRESSSGKKVTVDKAMKLSAVWACVRLISTSVAGLPLGVYERK 83 (434) T ss_pred chhhhhhhcccccchhhhcccccccccCchHHHHHHhcCCccCCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEEc Confidence 2222111111111 11122234556666777788899999999999999999999999999999999999988 Q ss_pred CCc-ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEE Q lcl|Aclame:pro 73 DGG-IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWY 151 (416) Q Consensus 73 ~~~-~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~ 151 (416) .+| +.+..+|+++++|+.+||++||+++||+.++.+++++||+|++|.++ .|++++|+|++|++|++..+.+|...|+ T Consensus 84 ~~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~~~-~G~~~~L~~l~p~~v~~~~~~~g~~~y~ 162 (434) T protein:vir:43 84 ADGSRVDARSFPLYDVVHNSPNDDMTAFQFWQAMVASMLLWGNAYAEIRRA-AGRPAALDFLLPSRVDLECDENGRLKYF 162 (434) T ss_pred CCCccccccccHHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCcceEEEEcCCCeEEEE Confidence 765 45667899999999999999999999999999999999999999877 6999999999999999999988888877 Q ss_pred EEeeCCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHH Q lcl|Aclame:pro 152 QTVLNGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRK 231 (416) Q Consensus 152 ~~~~~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~ 231 (416) .+...+..+.+++++|||+++++.++++|+||+..+.+++....+++++..++|+||++|+++++.++.+++++.+++++ T Consensus 163 ~~~~~g~~~~~~~~eVih~~~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~r~ 242 (434) T protein:vir:43 163 YTTKKGARREIERTNMLHIPAFTLDGRIGLSAIRYGVDVFGSVMSAEDAANGTFKNGLLPTVAFKVDRILQPAQREEFRE 242 (434) T ss_pred EEecCceEEEEccccEEEecCcCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEecCCCCCHHHHHHHHH Confidence 77777888999999999999998899999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHh---hcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCC--cccHHHHHHHHHHH Q lcl|Aclame:pro 232 EWKRV---NKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKAT--FSNIEHQSIEYVRN 306 (416) Q Consensus 232 ~~~~~---~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~--~s~~e~~~~~f~~~ 306 (416) .|++. .++|+++||++|++|++++++++|+|++|.+++++++||++|||||.+||..+.++ +++.|++...|+.+ T Consensus 243 ~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s~~e~~~~~f~~~ 322 (434) T protein:vir:43 243 YVKSVSGAMNSGRSPVLEQGITPETIGINPVDAQLLETREHGVIEICRWFGVPPWMIGQTDKGSNWGTGLEQQMLAFLTF 322 (434) T ss_pred HHHHhcCccccCCccccCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcCCccccchHHHHHHHHHHH Confidence 88764 45788999999999999999999999999999999999999999999999887664 78999999999999 Q ss_pred HHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeec Q lcl|Aclame:pro 307 TLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISS 386 (416) Q Consensus 307 ~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~ 386 (416) ||.|++.+||++||++|+++.++ .+++++||++.+++.|.+++++++.+++++|+||+||+|+++||||+||||++++| T Consensus 323 ~L~P~~~~ie~~ln~kL~~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD~~~~~ 401 (434) T protein:vir:43 323 SISSITNQIQQCVNKRLLTAPER-IRYYAEFSLEGFLKADSAGRAAWYSTMAQNGFMTRNEGRRKENLPELPGGDILTVQ 401 (434) T ss_pred HHHHHHHHHHHHHHhhcCChhhh-cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeec Confidence 99999999999999999998775 46899999999999999999999999999999999999999999999999999999 Q ss_pred cCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 387 LNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 387 ~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +|++|++..++.+..+. .++++.+-.+ T Consensus 402 ~n~~~~~~~~~~~~~~~---~~~~~~~~~~ 428 (434) T protein:vir:43 402 SNLVPIDQLGQSNKSQA---VRAALMNWFS 428 (434) T ss_pred cCccchhhhhccCCCcc---hhhhhhccCC Confidence 99999988876554433 1222221111 No 17 >protein:vir:5737 Length: 419 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:122 # MgeName: PY54 # Cross-refs: genbank:acc:NP_892048;genbank:gi:33770511;goa:Q7Y412;interpro:IPR006427;interpro:IPR006944;uniprot:Q7Y412;genbank:GeneID:1732929;interpro:IPR010994 Probab=100.00 E-value=2.7e-99 Score=561.01 Aligned_cols=408 Identities=25% Similarity=0.390 Sum_probs=357.1 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcc-eee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI-ERK 79 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~-~~~ 79 (416) |||.++|+++........ . .+...+....+.+++.++.+.|+++++|++||++||+++|++||++|+.+++|. ... T Consensus 1 m~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~g~~~~~ 77 (419) T protein:vir:57 1 MFIPQFWKGRPSENRVNW--Q-VVPGGMRSSSSQAGVIITPETALALSAVRACVTLLAESVAQLPCVLYRRTENGGREIA 77 (419) T ss_pred CcchhhhccCCccccccc--c-ccccccccccccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEEcCCCceecc Confidence 999999998754332221 1 122334456677889999999999999999999999999999999999887764 455 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCee Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKA 159 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 159 (416) .+|+++++|+.+||++||+++||+.++.+++++||+|++|.|+..|++++|||++|+.|++..+.++. .+|.+... . T Consensus 78 ~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~pl~~~~v~v~~~~~g~-~~y~~~~~--~ 154 (419) T protein:vir:57 78 FDHPLHDLIRYQPNRKDTAFEYHEQTQGVLGLEGNSYSLIDRNGRGDITELIPINPHKVIVLKGPDGM-PYYDIPSI--G 154 (419) T ss_pred ccchHHHHHhhccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCcceEEEECCCce-EEEEEcCC--c Confidence 68899999999999999999999999999999999999999999999999999999999998887765 44555433 3 Q ss_pred EEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC----cCCHHHHHHHHHHHHH Q lcl|Aclame:pro 160 IELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA----FLDEKPKENVRKEWKR 235 (416) Q Consensus 160 ~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~----~~~~e~~~~~~~~~~~ 235 (416) ..++.++|||+++++.++++|+||+..+..++....++++++.++|+||++|+++++.+. ..++++.+++++.|.+ T Consensus 155 ~~~~~~~vih~r~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~e~~~~~~~~~~~ 234 (419) T protein:vir:57 155 EILPMRMVHHIKSFSLDGYIGTSPIQTNPDVLGLGIAVEQHAAQVFARGTTMSGVIERPFEAKAIASQAAVDAILAKWTE 234 (419) T ss_pred eEEchhhEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEecCcCCcccCHHHHHHHHHHHHH Confidence 578999999999999999999999999999999999999999999999999999999854 4688999999999886 Q ss_pred hh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 236 VN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPW 311 (416) Q Consensus 236 ~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~ 311 (416) .+ ++++++|+++|++|++++.+++|+|++|.+++++++||++|||||.+||..+.++++|.|++...|+++||+|+ T Consensus 235 ~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~~~l~P~ 314 (419) T protein:vir:57 235 RYGGVRNAFSVGMLQEGMTYKQLSQDNEKAQLLQSRQYTVNEVCRLYKVPPHMIQDLQKSTNNNIEHQGLQYVIYTMLAI 314 (419) T ss_pred HhccccccccceecCCCceEEEcCCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCccccHHHHHHHHHHHHHHHH Confidence 54 56889999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccc Q lcl|Aclame:pro 312 IVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVF 391 (416) Q Consensus 312 ~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~ 391 (416) +++|+++|+++||++.++ .+++++||++.+++.|.+++++++.+++++|+||+||+|+++|+||+||||++++|+|+++ T Consensus 315 ~~~ie~~l~~~ll~~~~~-~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD~~~~~~n~~~ 393 (419) T protein:vir:57 315 LKRHESAMMRDLLLPSER-RDFYIEFNVSSLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLTPIPGGDKYLTPLNMVD 393 (419) T ss_pred HHHHHHHHHhhccCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeecccccc Confidence 999999999999998765 5899999999999999999999999999999999999999999999999999999999998 Q ss_pred cccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 392 LDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 392 ~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ++..+..++.. ++..+..+..+.. T Consensus 394 ~~~~~~~~~~~-~~~~~~~~~~~~~ 417 (419) T protein:vir:57 394 SKALTGIGKAT-PQQLKDIEAILCT 417 (419) T ss_pred ccccccccCCC-cccCcchhhhhhc Confidence 87766643221 2222222222222 No 18 >protein:vir:100150 Length: 437 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945033;genbank:gi:38707893;genbank:GeneID:2744197 Probab=100.00 E-value=6.4e-99 Score=558.90 Aligned_cols=414 Identities=24% Similarity=0.436 Sum_probs=365.4 Q ss_pred Cc--chhhhcccccc-----ccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 ML--LERMFEKRSGS-----SDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~--~~~~f~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) |- +.|+|.+-... ..+.+..++.++..+++..+.++..++.+.|+++++|++||++||+++|++||++|+.++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~ci~~Ia~~ia~lp~~~~~~~~ 80 (437) T protein:vir:10 1 MKQGKQRALGRIKSSFLKWLGVPISLTDGSFWSAWGGMGSSSGETVTADSALQLSAVWSCVRLIAETIATLPLNLYQTKP 80 (437) T ss_pred CCcchhhhhhhhHHhhhhhcCCcccCCchhHHHhhcccccCCCceechHhhhccHHHHHHHHHHHHHHhhCceeEEEEcC Confidence 77 66666653221 124444556778888888889999999999999999999999999999999999999887 Q ss_pred Ccc-eeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEE Q lcl|Aclame:pro 74 GGI-ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQ 152 (416) Q Consensus 74 ~~~-~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 152 (416) +|. ....+|+++++|+.+||++||+++||+.++.+++++||+|++|.|+. |++.+|||++|+.|++..+.++...|+. T Consensus 81 ~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~-g~~~~L~~l~p~~v~i~~~~~g~~~y~~ 159 (437) T protein:vir:10 81 DGTRVLAKQHRLYTVIHSQPNAENTAAEFWEVIVASMLLWGNGYARKLRSA-GVLIGLELMLPQRTTVKRLTSGALQYTY 159 (437) T ss_pred CCceeeccccHHHHHhhccCCcCCCHHHHHHHHHHHHhhcCCeEEEEEecC-CcEEEEEEEcCcceEEEECCCCeEEEEE Confidence 764 45678999999999999999999999999999999999999999985 9999999999999999998887777666 Q ss_pred EeeCCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHH Q lcl|Aclame:pro 153 TVLNGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKE 232 (416) Q Consensus 153 ~~~~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~ 232 (416) ....+....+++++|+|+|+++.++++|+||+..+..++....++.++..++|+||++|+++++.++.+++++.+++++. T Consensus 160 ~~~~g~~~~~~~~dIih~r~~~~d~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~ 239 (437) T protein:vir:10 160 RNVDGTVSTLAEDDVFHVRGFSLDGLMGLTPIQYAREVLGNSTAANKTSASVFRNGLRPSGVLSTDQILQKEKRAEIRTD 239 (437) T ss_pred EecCceEEEEccccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHHHHHHH Confidence 66677778899999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc--ccHHHHHHHHHHH Q lcl|Aclame:pro 233 WKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF--SNIEHQSIEYVRN 306 (416) Q Consensus 233 ~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~--s~~e~~~~~f~~~ 306 (416) |++.+ |+|+++||++|++|++++++++|++++|.+++++++||++|||||.+||..+.+++ +|.|++.+.|+++ T Consensus 240 ~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~e~~~~~f~~~ 319 (437) T protein:vir:10 240 LAEQFGGAMQAGKTMVLEAGMKYQAITMNPGDVQLLETRAFNIEEICRWYRVPPFMVGHSEKSTSWGTGIEQQTLGFLTF 319 (437) T ss_pred HHHHhcCccccCcceeccCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccchHHHHHHHHHHH Confidence 98654 56889999999999999999999999999999999999999999999999887654 8899999999999 Q ss_pred HHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCe-Eee Q lcl|Aclame:pro 307 TLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDK-YIS 385 (416) Q Consensus 307 ~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~-~~~ 385 (416) ||.|++.+||++|+++||++.++. +.+++||++++++.|.+++++++.+++++|+||+||+|+++||||+||||. +++ T Consensus 320 tl~P~~~~ie~~l~~kll~~~e~~-~~~~~fd~~~ll~~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~gg~~~~~~ 398 (437) T protein:vir:10 320 TLRPWLTRIEQAARRSLLRPGERD-QFYAEFSVEGLLRADSAGRAAFYSTMTQNGLMTRDECRAKENLPPMGGNAAVLTV 398 (437) T ss_pred HHHHHHHHHHHHHHhhccCccccC-ceEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCcceEee Confidence 999999999999999999987764 578999999999999999999999999999999999999999999998876 558 Q ss_pred ccCccccccccccccccCCc-ccC---CCCccCCC Q lcl|Aclame:pro 386 SLNYVFLDFLEEYQRLKAGG-AMK---GGDNKNEG 416 (416) Q Consensus 386 ~~n~~~~~~~~~~~~~~~~~-~~~---gge~~~~~ 416 (416) ++|++|++..++....+++. ..+ +++++..| T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (437) T protein:vir:10 399 QSALLPIDKLGEHTTATAAQDALKAWLYQEEKTRA 433 (437) T ss_pred cCcccchhhccCcCCCcchhccccccCCCCCCCCc Confidence 99999998877655443321 222 23333333 No 19 >protein:vir:189 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037699;genbank:gi:9634156;genbank:GeneID:1262529 Probab=100.00 E-value=8.6e-99 Score=558.20 Aligned_cols=398 Identities=23% Similarity=0.392 Sum_probs=347.6 Q ss_pred Cc---chhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcce Q lcl|Aclame:pro 1 ML---LERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIE 77 (416) Q Consensus 1 m~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 77 (416) =+ |+.+|+++...... .. .....++...+.++..++.+.|+++++|++||++||+++|++|+++|+.++++.. T Consensus 15 g~~~~~~~~f~~~~~~~~~-~~---~~~~~~~~~~~~~~~~v~~~~al~~~~v~~cv~~Ia~~iA~lp~~vy~~~~~~~~ 90 (424) T protein:vir:18 15 GWWARLKSWFVGGRLVTPN-QG---SQTGPVSAHGYLGDSSINDERILQISTVWRCVSLISTLTACLPLDVFETDQNDNR 90 (424) T ss_pred chHHHHHhhcccccccccc-ch---hhccccccccccccccccHHHhhccHHHHHHHHHHHHhhccCceEEEEeccCCce Confidence 11 22344433222211 11 1112233344556677899999999999999999999999999999998876543 Q ss_pred e--eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEee Q lcl|Aclame:pro 78 R--KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVL 155 (416) Q Consensus 78 ~--~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 155 (416) + ..+||++++|+.+||++||+++||+.++.+++++||+|++|.|+..|++.+|||++|++|++..+ ++..+|.+.. T Consensus 91 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~--~~~~~y~~~~ 168 (424) T protein:vir:18 91 KKVDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRNSAGDVISLLPLQSANMDVKLV--GKKVVYRYQR 168 (424) T ss_pred eeeccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCcceEEEEc--CCeEEEEEEe Confidence 3 35899999999999999999999999999999999999999999999999999999999998765 4566677888 Q ss_pred CCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCc-CCHHHHHHHHHHHH Q lcl|Aclame:pro 156 NGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAF-LDEKPKENVRKEWK 234 (416) Q Consensus 156 ~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~-~~~e~~~~~~~~~~ 234 (416) ++..+.|++++|||+|+++.++++|+||+..++.++..+.+++++..++|+||++|+++++.++. +++++.+++++.|+ T Consensus 169 ~g~~~~~~~~eVihir~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e~~~~~~~~~~ 248 (424) T protein:vir:18 169 DSEYADFSQKEIFHLKGFGFTGLVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQRSQVEENFK 248 (424) T ss_pred CCeEEEeccccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCcCCCHHHHHHHHHHHH Confidence 88888999999999999999999999999999999999999999999999999999999999765 79999999999998 Q ss_pred Hhh---cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc--ccHHHHHHHHHHHHHH Q lcl|Aclame:pro 235 RVN---KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF--SNIEHQSIEYVRNTLQ 309 (416) Q Consensus 235 ~~~---~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~--s~~e~~~~~f~~~~l~ 309 (416) +.. ++++++||++|++|++++++++|+|++|.+++++++||++|||||.+||..+++++ ++.|++...|+++||. T Consensus 249 ~~~~~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq~~~~f~~~tl~ 328 (424) T protein:vir:18 249 EIAGGPVKKRLWILEAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQQNLGFLQYTLQ 328 (424) T ss_pred HHhCCcccCCceeccCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCCCCcccccccHHHHHHHHHHHHHH Confidence 754 56789999999999999999999999999999999999999999999999888765 8899999999999999 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCc Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNY 389 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~ 389 (416) |++++||++||++|+++.++. +++++||++++++.|.+++++.+.+++++|+||+||+|+++|+||+||||++++++|+ T Consensus 329 P~~~~ie~~ln~~L~~~~~~~-~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~ggD~~~~~~n~ 407 (424) T protein:vir:18 329 PYISRWENSIQRWLIPSKDVG-RLHAEHNLDGLLRGDSASRAAFMKAMGESGLRTINEMRRTDNMPPLPGGDVAMRQAQY 407 (424) T ss_pred HHHHHHHHHHHhhcCCccccC-CeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeeccCc Confidence 999999999999999988764 7999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 390 VFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 390 ~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +|++..++..++. |+| T Consensus 408 ~~l~~~~~~~~~~-----------~n~ 423 (424) T protein:vir:18 408 VPITDLGTNKEPR-----------NNG 423 (424) T ss_pred cchhhhhccCCcc-----------ccC Confidence 9998765433222 222 No 20 >protein:vir:1380 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612832;genbank:gi:20065966;genbank:GeneID:935782 Probab=100.00 E-value=1.2e-98 Score=557.36 Aligned_cols=401 Identities=27% Similarity=0.473 Sum_probs=353.7 Q ss_pred Ccch-hhhccccccccccc---------cchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEe Q lcl|Aclame:pro 1 MLLE-RMFEKRSGSSDHED---------GFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYK 70 (416) Q Consensus 1 m~~~-~~f~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 70 (416) |.|. ++|++++....... .....++..++ ...+..++.+.|+++++|++||++||++||++|+++++ T Consensus 1 MG~f~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~v~~~~al~~~~v~~ci~~ia~~iA~lp~~~~~ 77 (422) T protein:vir:13 1 MGFLRGLFNKKNNNDEKRSNYDEDIGIDISDSNFWEKFG---IKLNFSVRGKRALKENTVYVCTKIRAESIGKLSLKIYK 77 (422) T ss_pred CchhhhhhhccCCccchhhhhhhccccccCcchhhhhcc---ccCCcccchhhhhccHHHHHHHHHHHHhhhhCceEEEe Confidence 8766 58887664432211 11223333333 23455688899999999999999999999999999998 Q ss_pred ecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCc--- Q lcl|Aclame:pro 71 RTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTG--- 147 (416) Q Consensus 71 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~--- 147 (416) .++. ..+|+++++|+.+||++||+++||+.++.+++++||||++|.|+..|++.+|+|++|++|++..+.++. T Consensus 78 ~~~~----~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~~~~~~~~~~~~ 153 (422) T protein:vir:13 78 DKEE----YKEHELYYLLRYKPNPLMSSINFWKCLETQRTLKGNAYAYIERDRKGKIIGLYPINSDNVTKIIDDDNFLSS 153 (422) T ss_pred cCcc----cccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCcceEEEEcCCcceec Confidence 6543 357899999999999999999999999999999999999999999999999999999999999988763 Q ss_pred --EEEEEE-eeCCeeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCH Q lcl|Aclame:pro 148 --MLWYQT-VLNGKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDE 223 (416) Q Consensus 148 --~~~~~~-~~~~~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~ 223 (416) ..+|.+ ...+....+++++|||++++ +.++++|+||+..+.+++....++.+++.++|+||++|+++++.++.+++ T Consensus 154 ~~~~~y~~~~~~g~~~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~ 233 (422) T protein:vir:13 154 LSKVWYVVTDKNGKEHKLLPDEMLHFIGDITLDGLIGIKPLDYLRCTIENGRATQEFINKFFKNGLSIKGIVQYVGDLDE 233 (422) T ss_pred cceEEEEEEeCCCeEEEEcccceEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCH Confidence 233444 45567778999999999964 67889999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH Q lcl|Aclame:pro 224 KPKENVRKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ 299 (416) Q Consensus 224 e~~~~~~~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~ 299 (416) ++.+++++.|++.+ ++++++|+++|++|++++.+++|+|++|.+++++++||++|||||.+||..++++++|.|++ T Consensus 234 e~~~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVpp~~lg~~~~~~~sn~e~~ 313 (422) T protein:vir:13 234 KAKKIFKKEFESMSNGLENAHSISLLPFGYQFQPISLSMADAQFLENSKLTKRELAATFGMKSYHLNDLERATFNNLTEQ 313 (422) T ss_pred HHHHHHHHHHHHHhcCccccCCceecCCCceeeeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHH Confidence 99999999998764 56789999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Q lcl|Aclame:pro 300 SIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN 379 (416) Q Consensus 300 ~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g 379 (416) ..+|+++||.|++++||++||++||++.++..+++++||++++++.|.+++++++++++++|+||+||+|+++|+||+|| T Consensus 314 ~~~f~~~~l~P~~~~ie~~l~~~Ll~~~~~~~g~~i~fd~~~l~r~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~g 393 (422) T protein:vir:13 314 QKDFYVTTLQSSLTVYEQEIQDKLFSQYETLQDVKAEFNVDTILRSDIKTRYEAYRIGIQGGFIEANEARRRENLPPVEG 393 (422) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCChhhhcCCceEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999999 Q ss_pred CCeEeeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 380 GDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 380 gd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) ||++++|+|++|++..++.+. +|||+.++ T Consensus 394 gD~~~~~~n~~~l~~~~~~~~-------~~g~~~g~ 422 (422) T protein:vir:13 394 GDRLLVNGNMIPIEMAGEQYK-------KGGEKGGK 422 (422) T ss_pred cCeeeeccCccchhhcccccc-------cCCCcCCC Confidence 999999999999998875332 33333333 No 21 >protein:vir:1884 Length: 424 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037664;genbank:gi:9634122;genbank:GeneID:1262519 Probab=100.00 E-value=1.4e-98 Score=557.12 Aligned_cols=398 Identities=23% Similarity=0.396 Sum_probs=345.7 Q ss_pred Cc---chhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcce Q lcl|Aclame:pro 1 ML---LERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIE 77 (416) Q Consensus 1 m~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 77 (416) =+ |+.+|.++...... ... ....++...+.++..++.+.|+++++|++||++||+++|++||++|+.++++.. T Consensus 15 g~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~v~~~~al~~~~v~~cv~~Ia~~iA~lp~~~~~~~~~~~~ 90 (424) T protein:vir:18 15 GWWARLQSWFVGGRLVTPN-QGS---QTGPVSAHGHLGDSSINDERILQISTVWRCVSLISTLTACLPLDVFETDQNDNR 90 (424) T ss_pred chHHHHHhhhccccccccc-ccc---cccccccccccccccccHHHhhccHHHHHHHHHHHHhhccCceEEEEeecCCce Confidence 11 22233322111111 110 111122233456778899999999999999999999999999999998776543 Q ss_pred e--eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEee Q lcl|Aclame:pro 78 R--KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVL 155 (416) Q Consensus 78 ~--~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~ 155 (416) + ..+||++++|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|||++|+.|++..+ ++..+|.+.. T Consensus 91 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~pl~~~~V~v~~~--~~~~~y~~~~ 168 (424) T protein:vir:18 91 KKVDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRNSAGDVISLLPLQSANMDVKLV--GKKVVYRYQR 168 (424) T ss_pred eeeccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCcceEEEEc--CCeEEEEEEe Confidence 3 35899999999999999999999999999999999999999999999999999999999998765 4566777888 Q ss_pred CCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC-cCCHHHHHHHHHHHH Q lcl|Aclame:pro 156 NGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA-FLDEKPKENVRKEWK 234 (416) Q Consensus 156 ~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~-~~~~e~~~~~~~~~~ 234 (416) ++..+.|++++|||+|+++.++++|+||+..++++++...+++++..++|+||++|+++++.++ .+++++.+++++.|+ T Consensus 169 ~g~~~~~~~~eIih~r~~~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~~~~~~ 248 (424) T protein:vir:18 169 DSEYADFSQKEIFHLKGFGFTGLVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQRSQVEENFK 248 (424) T ss_pred CCeEEEeccccEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCcCCCHHHHHHHHHHHH Confidence 8888899999999999999999999999999999999999999999999999999999999976 479999999999998 Q ss_pred Hhh---cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc--ccHHHHHHHHHHHHHH Q lcl|Aclame:pro 235 RVN---KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF--SNIEHQSIEYVRNTLQ 309 (416) Q Consensus 235 ~~~---~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~--s~~e~~~~~f~~~~l~ 309 (416) +.. ++++++||++|++|++++++++|+|++|.+++++++||++|||||.+||..+++++ ++.|++...|+++||. T Consensus 249 ~~~~g~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq~~~~f~~~tl~ 328 (424) T protein:vir:18 249 EIAGGPVKKRLWILEAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQQNLGFLQYTLQ 328 (424) T ss_pred HHhCCcccCCceeccCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccccHHHHHHHHHHHHHH Confidence 764 56789999999999999999999999999999999999999999999999888765 8999999999999999 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCc Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNY 389 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~ 389 (416) |+++.||++||++|+++.+. .+++++||++++++.|.+++++.+.+++++|+||+||+|+++||||+||||++++++|+ T Consensus 329 P~~~~ie~~l~~~L~~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~gGD~~~~~~n~ 407 (424) T protein:vir:18 329 PYISRWENSIQRWLIPAKDV-GRIHAEHNLDGLLRGDSASRAAFMKAMGEAGLRTINEMRRTDNLPPLPGGDVAMRQSQY 407 (424) T ss_pred HHHHHHHHHHHhhcCCcccc-CCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeeccCc Confidence 99999999999999998876 47899999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 390 VFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 390 ~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +|++...+..+ ..|+| T Consensus 408 ~~l~~~~~~~~-----------p~~~g 423 (424) T protein:vir:18 408 VPITDLGTNKE-----------PRNNG 423 (424) T ss_pred cchHhhhccCC-----------CccCC Confidence 99987654322 22222 No 22 >protein:vir:81152 Length: 411 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285809;genbank:gi:148747730;genbank:GeneID:5247195 Probab=100.00 E-value=2.1e-98 Score=556.09 Aligned_cols=395 Identities=27% Similarity=0.484 Sum_probs=352.5 Q ss_pred Ccchhh----hccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcc Q lcl|Aclame:pro 1 MLLERM----FEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI 76 (416) Q Consensus 1 m~~~~~----f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 76 (416) |.|... |++++.... ...+.+...++ +..++.+.|+++++|++||++||+++|++||++|+.++++. T Consensus 1 MG~~~~~~~~~~~~~~~~~---~~~~~~~~~~g------~~~~~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~~~ 71 (411) T protein:vir:81 1 MGWWSRLTRFFRPRNETVD---MTNPLLLQWLG------VDPDTPRNQLSEATYFACLKILSESLGKLPLKMYQKTERGI 71 (411) T ss_pred CchHHHHHhhccCcccccc---cchHHHHHHhc------CcccChhhhhccHHHHHHHHHHHHhHhhCceeEEEecCCce Confidence 887643 443333222 22333333332 23467789999999999999999999999999999999888 Q ss_pred eeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCc-----EEEE Q lcl|Aclame:pro 77 ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTG-----MLWY 151 (416) Q Consensus 77 ~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~-----~~~~ 151 (416) .+..+|+++++|+.+||++||+++||+.++.+++++||||+++.|+ .|++.+|||++|+.|++..++++. ..+| T Consensus 72 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~-~g~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~ 150 (411) T protein:vir:81 72 VKSDREELYNLLKLRPNPYMTSSVFWSTVEMNRNHYGNAYVWCQYS-GPQLQALWILPSQYVTIVVDDRGLLGEKNAIWY 150 (411) T ss_pred eeecccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCceEEEEEECCceEEEEEcCcccccccceEEE Confidence 8888999999999999999999999999999999999999999998 599999999999999999886642 2334 Q ss_pred EEe--eCCeeEEechhheeeecc-CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHH Q lcl|Aclame:pro 152 QTV--LNGKAIELYDYEVLHFKG-LSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKEN 228 (416) Q Consensus 152 ~~~--~~~~~~~~~~~~vih~~~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~ 228 (416) .+. .++..+.+++++|||+|+ ++.++++|+||+..+..++....++.++..++|+||++|+++++.++.+++++.++ T Consensus 151 ~~~~~~~g~~~~~~~~eiih~k~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~ 230 (411) T protein:vir:81 151 RYNDPYDGKMYVFRNDEILHFKTSVTFDGITGLSVRDVLKHTVDGALESQKFMNNLYKTGLTGKAVLEYTGDLNQEARDR 230 (411) T ss_pred EEEecCCceEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCHHHHHH Confidence 443 356677899999999995 46789999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHH Q lcl|Aclame:pro 229 VRKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYV 304 (416) Q Consensus 229 ~~~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~ 304 (416) +++.|++.+ ++|+++|+++|++|++++++++|+|++|.+++++++||++|||||.+||..+++|++|.|++..+|+ T Consensus 231 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~n~e~~~~~f~ 310 (411) T protein:vir:81 231 LVKGFEQFANGSKNAGKIIPVPLGMKLVPLDIKLTDSQFFELKKYTALQIAAAFGIKPNQINDYEKSSYASAEAQNLAFY 310 (411) T ss_pred HHHHHHHHhcCccccCCceecCCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCchhHHHHHHHHH Confidence 999998764 5678999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEe Q lcl|Aclame:pro 305 RNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYI 384 (416) Q Consensus 305 ~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~ 384 (416) ++||.|++++||++|+++||++.++..+++++||++++++.|.+++++++.+++++|+||+||+|+++|+||+||||+++ T Consensus 311 ~~~l~P~~~~ie~~l~~~ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggD~~~ 390 (411) T protein:vir:81 311 VDTLLYVLKQYEEEITYKILSNDLISQGHYFKFNVNVILRADIKTQMDSLSTAVQNGIMTPNEARDYLDMPADDYGNNLM 390 (411) T ss_pred HHHHHHHHHHHHHHHHhhcCChhhcCCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eccCccccccccccccccCCcccCCCCc Q lcl|Aclame:pro 385 SSLNYVFLDFLEEYQRLKAGGAMKGGDN 412 (416) Q Consensus 385 ~~~n~~~~~~~~~~~~~~~~~~~~gge~ 412 (416) +++|++|++..++ +..+|||+ T Consensus 391 ~~~n~~pl~~~~~-------~~~kgGd~ 411 (411) T protein:vir:81 391 ANGNYIPLSMLGA-------NYGKGGDS 411 (411) T ss_pred eccCccchhhhhh-------hhccCCCC Confidence 9999999987653 22468888 No 23 >protein:vir:100249 Length: 431 # NCBI annotation: gp78 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355414;genbank:gi:77864704;genbank:GeneID:3725971 Probab=100.00 E-value=4e-98 Score=554.57 Aligned_cols=398 Identities=20% Similarity=0.312 Sum_probs=351.2 Q ss_pred Ccchhhhcccccccccc----------------------ccch-hHHHhhhcCccccccccccHHHHhccHHHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHE----------------------DGFN-NILLNMFGGRKTASGERVSESNSLVQPDIFACVNVL 57 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~----------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~i 57 (416) |.|..+|++++...... .+.+ ..+..++ +..+.++..++.+.|+++++|++||++| T Consensus 1 Mgl~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~g~~v~~~~al~~~~V~~ci~~I 79 (431) T protein:vir:10 1 MGLFDFIRREKQPEAQARPHVEPSFQASTPTTSIPGETFEGLDDPRLKEYI-RRGELNGGTGRETRALRNMAVLRCVTLI 79 (431) T ss_pred CcchhhhhcCcccccccccccccccccccccccccccccccccchHHHHhh-ccCccCcceechhhhhccHHHHHHHHHH Confidence 99888887654321100 0011 2233333 3445677889999999999999999999 Q ss_pred HHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccce Q lcl|Aclame:pro 58 SDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDY 137 (416) Q Consensus 58 a~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~ 137 (416) |+++|++|+++|+.+ +++....+|+++++|+.+||++||+++||+.++.+++++||+|++|.|+. |++++|+|++|.. T Consensus 80 a~~iA~lp~~v~~~~-~~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~-g~~~~L~pl~~~~ 157 (431) T protein:vir:10 80 SGTIGMLPMNLISSD-DSKQVLTDDPAHRLLKYKPNDWQTPMEFKSLMQLRALLDGESMARIVWSG-NRPIRLIPMDRGS 157 (431) T ss_pred HHhhccCceEEEEec-CceeeeccchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcC-CceEEEEEEcCce Confidence 999999999999875 45567789999999999999999999999999999999999999999985 8999999999999 Q ss_pred EEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeecc Q lcl|Aclame:pro 138 TNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKV 217 (416) Q Consensus 138 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~ 217 (416) |++..+.++...|+.....+..+.+++++|||+|+++.++++|+||+..+.+++....+++++..++|+||++|+++++. T Consensus 158 v~~~~~~~~~~~y~~~~~~g~~~~~~~~dViHir~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~ 237 (431) T protein:vir:10 158 AKGRLTSTWQIVYDYTTPTGDKIELPAREVFHLRDLSIDGVSGVSRVKLSGNALELAEQAERAASRTFRTGVMAGGAIEV 237 (431) T ss_pred eEEEEcCCCeEEEEEEeCCceEEEEchhhEEEecCcCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEec Confidence 99998888877776666777788999999999999999999999999999999999999999999999999999999999 Q ss_pred CCcCCHHHHHHHHHHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc Q lcl|Aclame:pro 218 PAFLDEKPKENVRKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF 293 (416) Q Consensus 218 ~~~~~~e~~~~~~~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~ 293 (416) ++.+++++.+++++.|++.+ |+|+++||++|++|++++++++|+|++|.+++++++||++|||||.+||..+++++ T Consensus 238 ~~~ls~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~r~~~~~~Ia~~fgVPp~~lg~~~~~t~ 317 (431) T protein:vir:10 238 PKELSDNAYGRMKASVQENHTGSENAGSWMLLEEGATAKQFSNTAASAQQIENRNHQIEEVARMYGVPRPLLMMDDTSWG 317 (431) T ss_pred CCCCCHHHHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCCCCCcc Confidence 99999999999999998764 66889999999999999999999999999999999999999999999999999999 Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCC----CcCHHHHH Q lcl|Aclame:pro 294 SNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETG----VLNKDEIR 369 (416) Q Consensus 294 s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g----~~t~NE~R 369 (416) +|.|++...|+++||.|++++||++||++||++.+. .+++++||+++|++.|.+++++.+.+++.+| +||+||+| T Consensus 318 sn~eq~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~~-~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~~g~lT~NE~R 396 (431) T protein:vir:10 318 SGIEQLAIFFIQYGLSHWFVSWEQAAARAFLPEKML-GQRQFKFNEGALLRGTLNDQAAFFSKALGAGGQSPWMKQNEVR 396 (431) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhc-CCceEEEechhhhccCHHHHHHHHHHHHhcccccCccCHHHHH Confidence 999999999999999999999999999999987655 4789999999999999999999999998665 59999999 Q ss_pred HHhCCCCCCC--CCeEeeccCccccccccccccccCCccc Q lcl|Aclame:pro 370 ELLERNPIEN--GDKYISSLNYVFLDFLEEYQRLKAGGAM 407 (416) Q Consensus 370 ~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~~~~~~~~ 407 (416) +++||||++| ||++++|+|+.+.+..+++... + T Consensus 397 ~~~gl~p~~~~~gD~~~~p~n~~~~~~~~~~p~~-----~ 431 (431) T protein:vir:10 397 EMLDLPRADDPVADQLRNPMTQKQKGSGDEPPAT-----T 431 (431) T ss_pred HHhCCCCCCCccccceecccccccCCCCCCCCCC-----C Confidence 9999999955 9999999998877654432111 1 No 24 >protein:vir:93610 Length: 454 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449295;genbank:gi:157166043;interpro:IPR006427;interpro:IPR006944;uniprot:Q6H9U6;genbank:GeneID:5580432 Probab=100.00 E-value=1.7e-97 Score=551.06 Aligned_cols=410 Identities=19% Similarity=0.282 Sum_probs=348.8 Q ss_pred Ccchhhhccccccc----cccccchhH---HHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 MLLERMFEKRSGSS----DHEDGFNNI---LLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~~~~~f~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) || +.+|+.+.... .....+... +...+ ++.+.+++.|+.+.|+++++|++||++||++||++||++|+.++ T Consensus 1 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~g~~v~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~ 78 (454) T protein:vir:93 1 MW-NLLRRTRKNQKSGRDVREAGWTSLFQAVAEPF-AGAWQQGVKADPEAVLSFHAVFACISLISQDIAKMRLRLMQTDA 78 (454) T ss_pred CC-CccccCcccccccccccchhhhhhhhhhhhhh-cchhhcCcccChHHhhccHHHHHHHHHHHHhhccCceEEEEecc Confidence 43 44443232221 112222222 22223 33567888999999999999999999999999999999999998 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEE Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQT 153 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~ 153 (416) ++..++..++.+++|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|+|++|++|++..+.+|...|... T Consensus 79 ~g~~~~~~~~~~~~L~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~y~~~ 158 (454) T protein:vir:93 79 QGIRRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNARGQIKELRILDWNRVEPLVADDGEVFYRIT 158 (454) T ss_pred CCccchhhhHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCcceEEEEcCCCcEEEEEE Confidence 88888888888888999999999999999999999999999999999999999999999999999999988776654433 Q ss_pred eeC----CeeEEechhheeeecc-CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHH Q lcl|Aclame:pro 154 VLN----GKAIELYDYEVLHFKG-LSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKEN 228 (416) Q Consensus 154 ~~~----~~~~~~~~~~vih~~~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~ 228 (416) ... +..+.+++++|||+++ ++.++++|+||+..+..++....+++++..++|+||++|+++++.++.+++++.++ T Consensus 159 ~~~~~~~~~~~~~~~~eViH~k~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~ 238 (454) T protein:vir:93 159 PDRNCGITEAVTVPAREVIHDRFNCFFHPLIGLPPVYAAGLAATQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKK 238 (454) T ss_pred eccccccceeEEecCcceEEeccCCCCCCceeccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEecCCCCCHHHHHH Confidence 222 3456899999999995 56789999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhh---cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHH Q lcl|Aclame:pro 229 VRKEWKRVN---KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVR 305 (416) Q Consensus 229 ~~~~~~~~~---~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~ 305 (416) +++.|++.+ ++|+++||++|++|++++++++|+|++|++++++++||++|||||.+||..+++|++|.|++.+.|++ T Consensus 239 ~~~~~~~~~~g~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~ 318 (454) T protein:vir:93 239 LKSNWDSGYTGENAGKTAILSNGAKYNPTTFSPVDSQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQQYYS 318 (454) T ss_pred HHHHHHHHhcccccCCceeccCCceEEEcccChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCcchhHHHHHHHHHH Confidence 999999775 56789999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEee Q lcl|Aclame:pro 306 NTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYIS 385 (416) Q Consensus 306 ~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~ 385 (416) +||.|++..||++||++|++.. +.+++||+++|++.|.+++++.+.+++++|+||+||+|+++||||+||||++++ T Consensus 319 ~~l~P~~~~ie~~ln~~L~~~~----~~~~~f~~~~ll~~D~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~ggD~~~~ 394 (454) T protein:vir:93 319 QCLQTLIESIELLLDEALETGE----NESTEFDVTTLLRMDSERRMKTLGDAVKNTLLTPNEARKRENLPPLAGGDALYL 394 (454) T ss_pred HHHHHHHHHHHHHHHHhhcCCC----CcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeeee Confidence 9999999999999999998753 468999999999999999999999999999999999999999999999999999 Q ss_pred ccCccccccccccccccCCcccC---CCC--cc--CCC Q lcl|Aclame:pro 386 SLNYVFLDFLEEYQRLKAGGAMK---GGD--NK--NEG 416 (416) Q Consensus 386 ~~n~~~~~~~~~~~~~~~~~~~~---gge--~~--~~~ 416 (416) +.|+.+++..+.++..+.+.... +.+ +. +++ T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 432 (454) T protein:vir:93 395 QQQNYSLEALSRRDAREDPFASSGKTASVPQAVAASDG 432 (454) T ss_pred ccCccchHhhhccCcccCCCCCCccCCCCCCCCCCCCC Confidence 99999987665543322211000 000 00 000 No 25 >protein:vir:98396 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1581 # MgeName: phiPVL(108) # Cross-refs: genbank:acc:YP_918929;genbank:gi:119443691;genbank:GeneID:4594558 Probab=100.00 E-value=3.2e-96 Score=544.13 Aligned_cols=403 Identities=22% Similarity=0.370 Sum_probs=346.1 Q ss_pred Ccchhhhcccccccc--ccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCccee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSD--HEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIER 78 (416) Q Consensus 1 m~~~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 78 (416) |.+..+|++...... +.... ..+...+.+....++..++.+.|+++++|++||++||+++|++|+++++.+ .. T Consensus 23 ~~~~~~f~~~e~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~al~~~~V~acv~~Ia~~iA~lpl~~~~~~----~~ 97 (441) T protein:vir:98 23 LVVVGIFYKNEKRDLQYNEDDL-QMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNG----QI 97 (441) T ss_pred hhccccccccccccccCCCcch-HHHHHHhhcccccCccccchhhhhccHHHHHHHHHHHHhhccCceEEecCC----cc Confidence 888888865443322 22222 233444444455567788999999999999999999999999999999632 24 Q ss_pred eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeC-- Q lcl|Aclame:pro 79 KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLN-- 156 (416) Q Consensus 79 ~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~-- 156 (416) ..+|+++++|+.+||++||+++||+.++.+++++||||++|.|+..|+|.+|+|++|+.|++..+.+|..+++.+... T Consensus 98 ~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~ 177 (441) T protein:vir:98 98 NYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKLDARGRLYYFHQRIDSN 177 (441) T ss_pred cccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCceeEEEECCCCcEEEEEEEeccC Confidence 467899999999999999999999999999999999999999999999999999999999999988887776655422 Q ss_pred --CeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-CHHHHHHHHHHH Q lcl|Aclame:pro 157 --GKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-DEKPKENVRKEW 233 (416) Q Consensus 157 --~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~ 233 (416) +..+.+++++|||+|+++.++++|+||+..+.+++....++++++.++|+||++|++++++++.+ ++++.+++++.| T Consensus 178 ~~~~~~~~~~~dviHir~~~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~~~~~~e~~~~~~~~~ 257 (441) T protein:vir:98 178 GNNIERNVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEF 257 (441) T ss_pred cceeeEEEccccEEEeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHHHHHH Confidence 23467999999999999989999999999999999999999999999999999999999999887 577788899988 Q ss_pred HHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHH Q lcl|Aclame:pro 234 KRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQ 309 (416) Q Consensus 234 ~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~ 309 (416) ++.+ ++|+++||++|++|++++++++|+|++|.+++++++||++|||||.+||... ++ ++.+++...|. .||+ T Consensus 258 ~~~~~G~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~-~~-~s~~q~~~~y~-~tl~ 334 (441) T protein:vir:98 258 HKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-AN-MSITDANLDYL-STLK 334 (441) T ss_pred HHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC-CC-ccHHHHHHHHH-HHHH Confidence 7654 5678999999999999999999999999999999999999999999998633 23 34566655554 6999 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC--eEeecc Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD--KYISSL 387 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd--~~~~~~ 387 (416) |++++||++||++|++.. .+++++||+++|++.|.+++++++++++++|+||+||+|+++||||+|||| .+++|+ T Consensus 335 P~~~~ie~~ln~~L~~~~---~~~~~~fd~~~llr~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~pi~gGd~~~~~~~~ 411 (441) T protein:vir:98 335 PYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDL 411 (441) T ss_pred HHHHHHHHHHHhhccccc---cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeecc Confidence 999999999999998754 367899999999999999999999999999999999999999999999998 588999 Q ss_pred CccccccccccccccCC---cccCCCCccC Q lcl|Aclame:pro 388 NYVFLDFLEEYQRLKAG---GAMKGGDNKN 414 (416) Q Consensus 388 n~~~~~~~~~~~~~~~~---~~~~gge~~~ 414 (416) |++|++..++++..+.+ .+.+|||+++ T Consensus 412 n~~~~~~~~~~q~~~~~~~~~~~kgGe~ne 441 (441) T protein:vir:98 412 NHVNIELVDEYQMNKSRATDKKLKGGEENE 441 (441) T ss_pred cccccccccccccccccccccccCCCCCCC Confidence 99999999887665543 3567888776 No 26 >protein:vir:9408 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:167 # MgeName: phi 13 # Cross-refs: genbank:acc:NP_803386;genbank:gi:29028698;genbank:GeneID:1258164 Probab=100.00 E-value=1.1e-95 Score=541.12 Aligned_cols=403 Identities=22% Similarity=0.351 Sum_probs=344.2 Q ss_pred Ccchhhhccccccc--cccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCccee Q lcl|Aclame:pro 1 MLLERMFEKRSGSS--DHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIER 78 (416) Q Consensus 1 m~~~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 78 (416) |++..+|.+..... .+.... ..+...+.+....++..++.+.|+++++|++||++||+++|++|+++++.+ .. T Consensus 23 ~~~~~lf~~~e~R~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~al~~~~V~~cv~~Ia~~iA~lp~~~~~~~----~~ 97 (441) T protein:vir:94 23 LVVVGIFYKNEKRDLQYNEDDL-QMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNG----QI 97 (441) T ss_pred hhccccccccccccccCCCcch-HHHHHHhcccCcccccccchhhhhccHHHHHHHHHHHHhhccCceeeecCc----cc Confidence 77777776433322 222222 233444444555567778999999999999999999999999999998632 24 Q ss_pred eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeC-- Q lcl|Aclame:pro 79 KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLN-- 156 (416) Q Consensus 79 ~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~-- 156 (416) ..+|+++++|+.+||++||+++||+.++.+++++||||+++.|+..|+|.+|+|++|+.|++..+.+|..+++.+... T Consensus 98 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~g~~~~~~~~~~~~ 177 (441) T protein:vir:94 98 NYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSN 177 (441) T ss_pred cccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEEEEeccC Confidence 467999999999999999999999999999999999999999999999999999999999999988887766554322 Q ss_pred --CeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-CHHHHHHHHHHH Q lcl|Aclame:pro 157 --GKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-DEKPKENVRKEW 233 (416) Q Consensus 157 --~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~ 233 (416) +..+.+++++|||+|+++.++++|+||+..+.++++...+++++..++|+||++|++++++++.+ ++++.+++++.| T Consensus 178 ~~~~~~~~~~~dvih~k~~~~dg~~G~spl~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~e~~e~~r~~~ 257 (441) T protein:vir:94 178 GNNIERNVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEF 257 (441) T ss_pred CceeEEEEccccEEEeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCCHHHHHHHHHHH Confidence 23467999999999998889999999999999999999999999999999999999999999887 578788999988 Q ss_pred HHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHH Q lcl|Aclame:pro 234 KRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQ 309 (416) Q Consensus 234 ~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~ 309 (416) ++.+ ++|+++||++|++|++++++++|+|++|.+++++++||++|||||.+||... +++ +.+++. .++..||+ T Consensus 258 ~~~~~G~~nag~~~vl~~G~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~~-s~~q~~-~~~~~tl~ 334 (441) T protein:vir:94 258 HKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-ANM-SITDAN-LDYLSTLK 334 (441) T ss_pred HHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC-CCc-cHHHHH-HHHHHHHH Confidence 8764 5688999999999999999999999999999999999999999999998643 333 345554 45567999 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC--eEeecc Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD--KYISSL 387 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd--~~~~~~ 387 (416) |++++||++||++|+++. .+++++||++.|++.|.+++++++.+++++|+||+||+|+++||||+|||| .+++++ T Consensus 335 P~~~~ie~eln~kl~~~~---~~~~~~fd~~~llr~D~~~~~~~~~~~i~~G~~T~NE~R~~~gl~Pi~ggd~~~~~~~~ 411 (441) T protein:vir:94 335 PYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDL 411 (441) T ss_pred HHHHHHHHHHhhhccccc---cCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeecc Confidence 999999999999998653 468899999999999999999999999999999999999999999999998 588999 Q ss_pred CccccccccccccccCC---cccCCCCccC Q lcl|Aclame:pro 388 NYVFLDFLEEYQRLKAG---GAMKGGDNKN 414 (416) Q Consensus 388 n~~~~~~~~~~~~~~~~---~~~~gge~~~ 414 (416) |++|++..++++..+.+ .+.+|||+++ T Consensus 412 n~~~~~~~~~~~~~~~~~~~~~~kgGe~~e 441 (441) T protein:vir:94 412 NHVNIELVDEYQMNKSRATDKKLKGGEENE 441 (441) T ss_pred cccccccccccccccccccccccCCCCCCC Confidence 99999998876655433 4567888877 No 27 >protein:vir:79984 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1875 # MgeName: tp310-3 # Cross-refs: genbank:acc:YP_001430000;genbank:gi:156604055;genbank:GeneID:5525444 Probab=100.00 E-value=1.1e-95 Score=541.12 Aligned_cols=403 Identities=22% Similarity=0.351 Sum_probs=344.2 Q ss_pred Ccchhhhccccccc--cccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCccee Q lcl|Aclame:pro 1 MLLERMFEKRSGSS--DHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIER 78 (416) Q Consensus 1 m~~~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 78 (416) |++..+|.+..... .+.... ..+...+.+....++..++.+.|+++++|++||++||+++|++|+++++.+ .. T Consensus 23 ~~~~~lf~~~e~R~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~al~~~~V~~cv~~Ia~~iA~lp~~~~~~~----~~ 97 (441) T protein:vir:79 23 LVVVGIFYKNEKRDLQYNEDDL-QMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNG----QI 97 (441) T ss_pred hhccccccccccccccCCCcch-HHHHHHhcccCcccccccchhhhhccHHHHHHHHHHHHhhccCceeeecCc----cc Confidence 77777776433322 222222 233444444555567778999999999999999999999999999998632 24 Q ss_pred eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeC-- Q lcl|Aclame:pro 79 KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLN-- 156 (416) Q Consensus 79 ~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~-- 156 (416) ..+|+++++|+.+||++||+++||+.++.+++++||||+++.|+..|+|.+|+|++|+.|++..+.+|..+++.+... T Consensus 98 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~g~~~~~~~~~~~~ 177 (441) T protein:vir:79 98 NYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSN 177 (441) T ss_pred cccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEEEEeccC Confidence 467999999999999999999999999999999999999999999999999999999999999988887766554322 Q ss_pred --CeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-CHHHHHHHHHHH Q lcl|Aclame:pro 157 --GKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-DEKPKENVRKEW 233 (416) Q Consensus 157 --~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~ 233 (416) +..+.+++++|||+|+++.++++|+||+..+.++++...+++++..++|+||++|++++++++.+ ++++.+++++.| T Consensus 178 ~~~~~~~~~~~dvih~k~~~~dg~~G~spl~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~e~~e~~r~~~ 257 (441) T protein:vir:79 178 GNNIERNVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEF 257 (441) T ss_pred CceeEEEEccccEEEeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCCHHHHHHHHHHH Confidence 23467999999999998889999999999999999999999999999999999999999999887 578788999988 Q ss_pred HHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHH Q lcl|Aclame:pro 234 KRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQ 309 (416) Q Consensus 234 ~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~ 309 (416) ++.+ ++|+++||++|++|++++++++|+|++|.+++++++||++|||||.+||... +++ +.+++. .++..||+ T Consensus 258 ~~~~~G~~nag~~~vl~~G~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~~-s~~q~~-~~~~~tl~ 334 (441) T protein:vir:79 258 HKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-ANM-SITDAN-LDYLSTLK 334 (441) T ss_pred HHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC-CCc-cHHHHH-HHHHHHHH Confidence 8764 5688999999999999999999999999999999999999999999998643 333 345554 45567999 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC--eEeecc Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD--KYISSL 387 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd--~~~~~~ 387 (416) |++++||++||++|+++. .+++++||++.|++.|.+++++++.+++++|+||+||+|+++||||+|||| .+++++ T Consensus 335 P~~~~ie~eln~kl~~~~---~~~~~~fd~~~llr~D~~~~~~~~~~~i~~G~~T~NE~R~~~gl~Pi~ggd~~~~~~~~ 411 (441) T protein:vir:79 335 PYITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDL 411 (441) T ss_pred HHHHHHHHHHhhhccccc---cCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeecc Confidence 999999999999998653 468899999999999999999999999999999999999999999999998 588999 Q ss_pred CccccccccccccccCC---cccCCCCccC Q lcl|Aclame:pro 388 NYVFLDFLEEYQRLKAG---GAMKGGDNKN 414 (416) Q Consensus 388 n~~~~~~~~~~~~~~~~---~~~~gge~~~ 414 (416) |++|++..++++..+.+ .+.+|||+++ T Consensus 412 n~~~~~~~~~~~~~~~~~~~~~~kgGe~~e 441 (441) T protein:vir:79 412 NHVNIELVDEYQMNKSRATDKKLKGGEENE 441 (441) T ss_pred cccccccccccccccccccccccCCCCCCC Confidence 99999998876655433 4567888877 No 28 >protein:vir:93943 Length: 409 # NCBI annotation: ORF010 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1485 # MgeName: 3A # Cross-refs: genbank:acc:YP_239936;genbank:gi:66395598;genbank:GeneID:5131009 Probab=100.00 E-value=9.9e-96 Score=541.43 Aligned_cols=400 Identities=24% Similarity=0.368 Sum_probs=345.5 Q ss_pred Ccchhhhcccc-ccc-----cccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCC Q lcl|Aclame:pro 1 MLLERMFEKRS-GSS-----DHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDG 74 (416) Q Consensus 1 m~~~~~f~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 74 (416) |.=.+++++.. ... .+..+. .+ +.+....++..++.+.|+++++|++||++||++||++||++++.++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~v~~~~~~~~~~V~~ci~~Ia~~ia~lp~~~~~~~~- 74 (409) T protein:vir:93 1 MAKENIVTRIKKKLIDNWIDQSTSKL----YD-FSPWKNRSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK- 74 (409) T ss_pred CCccchhhhhhhhhhhhhhccccccc----cc-cccccCccccccchhhhhccHHHHHHHHHHHHhhhhCceeEeeccc- Confidence 43333333211 000 000000 00 1111123445577889999999999999999999999999998653 Q ss_pred cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEe Q lcl|Aclame:pro 75 GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTV 154 (416) Q Consensus 75 ~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 154 (416) ..+|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|+|++|+.|++..+.+++.++|.+. T Consensus 75 ----~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~~~~~~~~~~~~y~~~ 150 (409) T protein:vir:93 75 ----VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIH 150 (409) T ss_pred ----cccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCcEEEEEEE Confidence 3578999999999999999999999999999999999999999999999999999999999999888877776664 Q ss_pred -eCCeeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHH Q lcl|Aclame:pro 155 -LNGKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKE 232 (416) Q Consensus 155 -~~~~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~ 232 (416) ..+..+.+++++|||++++ +.++++|+||+..+.++++...++.++. ++.++..++++++.++.+++++.+++++. T Consensus 151 ~~~g~~~~~~~~eVih~r~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~ 228 (409) T protein:vir:93 151 AATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQVLED 228 (409) T ss_pred cCCceEEEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecCCCCCHHHHHHHHHH Confidence 4456678999999999976 6688999999999999999999998884 56666667889999999999999999999 Q ss_pred HHHhh-cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 233 WKRVN-KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPW 311 (416) Q Consensus 233 ~~~~~-~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~ 311 (416) |++.. ++++++|+++|++|++++++++|+|++|.+++++++||++|||||.+||+.+++++++.|++.+.|+++||.|+ T Consensus 229 ~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~~~~~sn~e~~~~~f~~~~l~P~ 308 (409) T protein:vir:93 229 FKQYYEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPI 308 (409) T ss_pred HHHHhhcCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHHH Confidence 98754 67889999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccc Q lcl|Aclame:pro 312 IVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVF 391 (416) Q Consensus 312 ~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~ 391 (416) +.+|+++|+++|+++.++..+++|+||.+++++.|.+++++++.+++++|++|+||+|+++|+||+||||++++++|++| T Consensus 309 ~~~ie~~l~~~Ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~ggD~~~~~~n~~~ 388 (409) T protein:vir:93 309 VKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLYP 388 (409) T ss_pred HHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeecccccc Confidence 99999999999999999888999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 392 LDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 392 ~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ++...+.+... .+|++|.+|| T Consensus 389 ~~~~~~~~~~~----~gG~~n~~e~ 409 (409) T protein:vir:93 389 IDTPLELRKSL----KGGDKNVNES 409 (409) T ss_pred cccchhhcccc----cCCCCCcCCC Confidence 98877655443 3556788888 No 29 >protein:vir:2683 Length: 412 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:57 # MgeName: phiSLT # Cross-refs: genbank:acc:NP_075502;genbank:gi:12719431;genbank:GeneID:920150 Probab=100.00 E-value=8.8e-96 Score=541.71 Aligned_cols=403 Identities=24% Similarity=0.364 Sum_probs=347.0 Q ss_pred Ccch---hhhcccc-ccccc--cccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCC Q lcl|Aclame:pro 1 MLLE---RMFEKRS-GSSDH--EDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDG 74 (416) Q Consensus 1 m~~~---~~f~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 74 (416) |-|- +++.+-. ..... ..... .+. .+++....++..++.+.|+++|+|++||++||+++|++||++++.++ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~iA~lp~~~~~~~~- 77 (412) T protein:vir:26 1 MNVIAKENIVTRIKKKLIDNWIDQSTS-KLY-DFSPWKNRSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK- 77 (412) T ss_pred CccchhhhhhhhhhhhHhhhhhccccc-ccc-cccccCCccccccchhhhhccHHHHHHHHHHHHhHhhCceeEeeccc- Confidence 5332 2222111 00000 00000 001 12222334566688999999999999999999999999999998653 Q ss_pred cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEe Q lcl|Aclame:pro 75 GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTV 154 (416) Q Consensus 75 ~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 154 (416) ..+|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|+|++|+.|++..+.+++.++|.+. T Consensus 78 ----~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~~~y~~~ 153 (412) T protein:vir:26 78 ----VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIH 153 (412) T ss_pred ----cccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCcEEEEEEE Confidence 3578999999999999999999999999999999999999999999999999999999999999988877776665 Q ss_pred e-CCeeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHH Q lcl|Aclame:pro 155 L-NGKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKE 232 (416) Q Consensus 155 ~-~~~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~ 232 (416) . .+..+.+++++|||++++ +.++++|+||+..+..++....++.++. ++.++..++++++.++.+++++.+++++. T Consensus 154 ~~~g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~a~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~ 231 (412) T protein:vir:26 154 AATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQVLED 231 (412) T ss_pred cCCceEEEEccccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecCCCCCHHHHHHHHHH Confidence 4 455678999999999986 6688999999999999999999998884 56666677888899999999999999999 Q ss_pred HHHhh-cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 233 WKRVN-KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPW 311 (416) Q Consensus 233 ~~~~~-~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~ 311 (416) |++.. ++++++||++|++|++++++++|+|++|.+++++++||++|||||.+||+.+++++++.|++.+.|+++||.|+ T Consensus 232 ~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~sn~e~~~~~f~~~~l~P~ 311 (412) T protein:vir:26 232 FKQYYEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPI 311 (412) T ss_pred HHHHhhcCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHHH Confidence 98754 67789999999999999999999999999999999999999999999999988999999999999999999999 Q ss_pred HHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccc Q lcl|Aclame:pro 312 IVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVF 391 (416) Q Consensus 312 ~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~ 391 (416) +.+|+++||++||++.++..+.+++||.+++++.|.+++++++++++++|+||+||+|+++|+||+||||++++++|++| T Consensus 312 ~~~ie~~ln~kLl~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~~ggD~~~~~~n~~~ 391 (412) T protein:vir:26 312 VKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLYP 391 (412) T ss_pred HHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeecccccc Confidence 99999999999999999888999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 392 LDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 392 ~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ++...+.++.. .+|++|.+|| T Consensus 392 ~~~~~~~~~~~----~gG~~n~~e~ 412 (412) T protein:vir:26 392 IDTPLELRKSL----KGGDKNVNES 412 (412) T ss_pred cccchhhcccc----cCCCCCcCCC Confidence 98876655433 3566888888 No 30 >protein:vir:8418 Length: 409 # NCBI annotation: gp13 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818314;genbank:gi:29566750;genbank:GeneID:1260067 Probab=100.00 E-value=2.5e-95 Score=539.23 Aligned_cols=403 Identities=27% Similarity=0.479 Sum_probs=343.8 Q ss_pred Ccch-hhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLLE-RMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) |.|. |+|+++.......... .. ...+...+..+..++.+.|+++++|++||++||+++|++||++|+.++++ +. T Consensus 1 Mgl~~~~f~~~~~~~~~~~~~-~~--~~~~~~~~~~g~~v~~~~al~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~--~~ 75 (409) T protein:vir:84 1 MSLFTRIFSGPSEERTLTKIS-GI--PSPAEDWAMHGDRPGANSAMTLGAFYACVTLLADTVASLSIDAYRKKDNV--RI 75 (409) T ss_pred CchhhhhhcCCCccccccccc-cc--ccccchhhccCcccchhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCc--cc Confidence 7655 5888765443322211 11 11223334567788899999999999999999999999999999977654 34 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEe-ecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCe Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQ-FGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGK 158 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~-r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 158 (416) ..|+++++|+.+||++||+++||+.++.+++++||+|+++. ++..|+|.+|||++|++|++....+....++.+..... T Consensus 76 ~~~~l~~lL~~~PN~~~t~~~f~~~l~~~l~l~Gn~~~~i~~~~~~g~~~~L~~l~p~~v~v~~~~~~~~~~~~~~~~~~ 155 (409) T protein:vir:84 76 PVSPAPKLLESTPYPGLTWFDWLWMLMESLAVTGNAFGYISARDEANRPTAIMPIHPDCIHVTDAKDEDGDWIEPVYRID 155 (409) T ss_pred ccchHHHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEECCCCceEEEEEEcCceeEEEEcCCCcceEEEEEecCC Confidence 67999999999999999999999999999999999999985 68889999999999999998866555444333333334 Q ss_pred eEEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhh Q lcl|Aclame:pro 159 AIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVN 237 (416) Q Consensus 159 ~~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~ 237 (416) ...+++++|||+++++.++ .+|+||+..+..++....++.+++.++|+||++|+++++.++.+++++.+++++.|.+.. T Consensus 156 g~~~~~~dvih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~~~~~ 235 (409) T protein:vir:84 156 GKVVPNHRIMHIKRYPVAGCALGMSPIEKAASAIGLGLAAERYGLRWFRDSANPSGILSSDADLTPDQVKQTQKQWIQSH 235 (409) T ss_pred ceEEchhhEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHHHHHHHHHHh Confidence 4678999999999888776 689999999999999999999999999999999999999999999999999999997654 Q ss_pred -cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc--ccHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 238 -KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF--SNIEHQSIEYVRNTLQPWIVN 314 (416) Q Consensus 238 -~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~--s~~e~~~~~f~~~~l~P~~~~ 314 (416) ++++++||++|++|++++.+++|+|++|.+++++++||++|||||.+||..+.+++ ++.|++..+|+++||.|+++. T Consensus 236 ~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~~l~P~~~~ 315 (409) T protein:vir:84 236 HNRRLPAVMSAGIKWQSVSITPNESQFLETRSFQRSEIAMWFRIPPHMIGDVEKSTSWGTGIEEQGINFVRHTLLPWLRC 315 (409) T ss_pred ccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccchHHHHHHHHHHHHHHHHHHH Confidence 67889999999999999999999999999999999999999999999998877654 888999999999999999999 Q ss_pred HHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccccc Q lcl|Aclame:pro 315 FEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDF 394 (416) Q Consensus 315 i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~ 394 (416) ||++|+++|. .|++++||++.|++.|.+++++++.+++++|+||+||+|+++|+||+||||++++|+|++|++. T Consensus 316 ie~~l~~~L~------~g~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~p~~ggD~~~~~~n~~~~~~ 389 (409) T protein:vir:84 316 IEQALDTFLP------RGQFVKFNVDGLMRGDVTARFTAYQMGLQNGIWSVNEVRAWEDAPPIPEGDIHLQPMNFVPLGY 389 (409) T ss_pred HHHHHHHhcc------CCCeEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccc Confidence 9999999872 3678999999999999999999999999999999999999999999999999999999999998 Q ss_pred ccccccccCCcccCCCCccCC Q lcl|Aclame:pro 395 LEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 395 ~~~~~~~~~~~~~~gge~~~~ 415 (416) .+..+..+++... ++.+.|+ T Consensus 390 ~~~~~~~~~~~~~-~~~~gn~ 409 (409) T protein:vir:84 390 VPPEEPAQEPQPN-SATEGNK 409 (409) T ss_pred CCccccCcCCCCC-CccCCCC Confidence 7766555443322 2222222 No 31 >protein:vir:6240 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:131 # MgeName: phi-BT1 # Cross-refs: genbank:acc:NP_813694;swissprot:trembl:q859c3;genbank:gi:29366754;interpro:IPR006427;interpro:IPR006944;uniprot:Q859C3;genbank:GeneID:1258894 Probab=100.00 E-value=3.3e-95 Score=538.53 Aligned_cols=411 Identities=26% Similarity=0.425 Sum_probs=344.4 Q ss_pred Cc-chhhhccccccccc---cccc---hhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 ML-LERMFEKRSGSSDH---EDGF---NNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~-~~~~f~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) |. |+++|+++...... ...+ ...+.. .+..+.+++.|+.+.|+++++|++||++||++||++||++|+.++ T Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~v~~~~al~~~~v~~~i~~ia~~iA~lp~~~~~~~~ 78 (457) T protein:vir:62 1 MGFWSALFGRGHSPALDAAEGRAWEPYDPSIYN--LGATASSGERVTPHDALQVSAVFASVRLLSETIATLPLSTYSKRG 78 (457) T ss_pred Cchhhhhhccccccccccccccccccchhhhhh--ccccccCCceechHHhhccHHHHHHHHHHHHhHhhCceEEEEecC Confidence 87 55677654332211 1111 122222 234466789999999999999999999999999999999999875 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcE---EE Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGM---LW 150 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~---~~ 150 (416) +++ +..+|+.+..|+.+||++||+++||+.++.+++++||||++|.++ .|++.+|+|++|++|++..+..++. .+ T Consensus 79 ~~~-~~~~~~~~~~ll~~pn~~~t~~~f~~~~~~~l~l~Gna~~~i~~~-~g~~~~l~~l~p~~v~v~~~~~~~~~~~~~ 156 (457) T protein:vir:62 79 GTR-KEIDTPEWLDFPNAEPGGMGRIDILSQTVLSLLLQGNAFLAVRWA-GPNIAGLDVLDPTKIHVHMVMVDGLRRKVF 156 (457) T ss_pred Ccc-ccccchHHHHhccccCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCcceEEEEeccCCccceeE Confidence 444 567888888888999999999999999999999999999999665 6899999999999999987654432 22 Q ss_pred --EEEeeCCe---eEEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHH Q lcl|Aclame:pro 151 --YQTVLNGK---AIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEK 224 (416) Q Consensus 151 --~~~~~~~~---~~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e 224 (416) |.+...+. ...+++++|||+++++.++ ++|+||+..++.++....++.+++.++|+||++|+++++.++.++++ T Consensus 157 ~~y~~~~~g~~~~~~~~~~~eiih~r~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~ls~e 236 (457) T protein:vir:62 157 EAYDIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGAHFFRNGAMPGAVVEVPGTMSEE 236 (457) T ss_pred EEEEEccCCceeEEEeeCccceEEecCCCCCCceecccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEcCCCCCHH Confidence 33333332 2468899999999988876 89999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc--ccHHH Q lcl|Aclame:pro 225 PKENVRKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF--SNIEH 298 (416) Q Consensus 225 ~~~~~~~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~--s~~e~ 298 (416) +.+++++.|++.+ ++++++||++|++|++++++++|++++|++++++++||++|||||.+||..+++++ +|.|+ T Consensus 237 ~~~~~~~~~~~~~~G~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~eq 316 (457) T protein:vir:62 237 GLARAREAWRAANSGVDNAHRVALLTEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLISDATNSTSWGSGLAE 316 (457) T ss_pred HHHHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCcccccchHHH Confidence 9999999998764 56889999999999999999999999999999999999999999999999888765 88999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 299 QSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIE 378 (416) Q Consensus 299 ~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ 378 (416) +.++|+++||.|++++||++||++|+++.+. .+++++||++++++.|.+++++++.+++++|+||+||+|+++||||+| T Consensus 317 ~~~~f~~~~l~P~~~~ie~~ln~~L~~~~~~-~~~~i~fd~~~l~~~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~ 395 (457) T protein:vir:62 317 QNIAFTMFSLRPWLERIEAGFNRLLFAETAD-RFRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLP 395 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCcccc-CceEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 9999999999999999999999999998775 578999999999999999999999999999999999999999999999 Q ss_pred CC--CeEeeccCccccccccccccccCCcccCC---------------CCccCCC Q lcl|Aclame:pro 379 NG--DKYISSLNYVFLDFLEEYQRLKAGGAMKG---------------GDNKNEG 416 (416) Q Consensus 379 gg--d~~~~~~n~~~~~~~~~~~~~~~~~~~~g---------------ge~~~~~ 416 (416) || |++++|+|+.+++...+++..+.+.+.+. |+.+++. T Consensus 396 ~g~~D~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 450 (457) T protein:vir:62 396 DGLGEKYRVPLNLGEIGEEPEPEPAPAPPAIDPPAEEPADDEEPDNAEGDPDEGE 450 (457) T ss_pred CCCcceeeeccccccccccccccccCCCccCCCCccCCCCCCCCCCCCCCCcccc Confidence 87 99999999999887666544332221111 1111100 No 32 >protein:vir:96980 Length: 409 # NCBI annotation: ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1643 # MgeName: 42e # Cross-refs: genbank:acc:YP_239857;genbank:gi:66395516;genbank:GeneID:5133013 Probab=100.00 E-value=2e-95 Score=539.74 Aligned_cols=403 Identities=24% Similarity=0.367 Sum_probs=345.9 Q ss_pred Ccchhhhcccccc-c-cc-cccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcce Q lcl|Aclame:pro 1 MLLERMFEKRSGS-S-DH-EDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIE 77 (416) Q Consensus 1 m~~~~~f~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 77 (416) |.=.++|++.... - .. ...... +.+. ......+...++.+.|+++++|++||++||++||++||++++.++ T Consensus 1 ~~~~~~~~~~k~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~v~~~~a~~~~~V~~ci~~ia~~ia~lp~~~~~~~~---- 74 (409) T protein:vir:96 1 MAKENIVTRIKKKLIDNWIDQSASK-LYDF-SPWKNKSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK---- 74 (409) T ss_pred CccccchhhhhhHHhhhhhcccccc-cccc-ccccCccccccchhhHhhhHHHHHHHHHHHHhhhhCceEEeeccc---- Confidence 6555555542111 0 00 000000 1111 111123445577889999999999999999999999999998553 Q ss_pred eeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEee-C Q lcl|Aclame:pro 78 RKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVL-N 156 (416) Q Consensus 78 ~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~-~ 156 (416) ..+|+++++|+.+||++||+++||+.++.+++++||||+++.|+..|++.+|||++|+.|++..+.+++..+|.+.. . T Consensus 75 -~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~ 153 (409) T protein:vir:96 75 -VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAAT 153 (409) T ss_pred -ccchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcCC Confidence 35789999999999999999999999999999999999999999999999999999999999998888877766644 4 Q ss_pred CeeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHH Q lcl|Aclame:pro 157 GKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKR 235 (416) Q Consensus 157 ~~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~ 235 (416) +..+.+++++|||++++ +.++++|+||+..+..+++...++.++. ++.++..++++++.++.+++++.+++++.|++ T Consensus 154 g~~~~~~~~evih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~~~ 231 (409) T protein:vir:96 154 GNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVSTEKRQQVLEDFKQ 231 (409) T ss_pred ceEEEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCceeEEecCCCCCHHHHHHHHHHHHH Confidence 56778999999999975 6688999999999999999999988874 45555566788889999999999999999987 Q ss_pred hh-cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 236 VN-KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVN 314 (416) Q Consensus 236 ~~-~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~ 314 (416) .+ ++++++|+++|++|++++++++|+|++|.+++++++||++|||||.+||..+++++++.|++.+.|+++||.|++++ T Consensus 232 ~~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~ 311 (409) T protein:vir:96 232 YYEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSNTNFAKNEELNRFYLQHTLLPIVKQ 311 (409) T ss_pred HhhcCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHHHHHH Confidence 54 66889999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccccc Q lcl|Aclame:pro 315 FEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDF 394 (416) Q Consensus 315 i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~ 394 (416) |+++|+++||++.++..+++++||.+++++.|.+++++++.+++++|+||+||+|+++|+||+||||++++++|++|++. T Consensus 312 ie~~l~~~Ll~~~~~~~g~~i~fd~~~ll~~d~~~~~e~~~~~~~~G~~T~NE~R~~~g~~pi~ggD~~~~~~n~~~~~~ 391 (409) T protein:vir:96 312 YEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLYPIDT 391 (409) T ss_pred HHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccccccc Confidence 99999999999999988999999999999999999999999999999999999999999999999999999999999987 Q ss_pred ccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 395 LEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 395 ~~~~~~~~~~~~~~gge~~~~~ 416 (416) ..+.+... .+|++|.+|| T Consensus 392 ~~~~~~~~----~gG~~n~~e~ 409 (409) T protein:vir:96 392 PLELRKSL----KGGDKNVNES 409 (409) T ss_pred chhhcccc----cCCCCCcCCC Confidence 76555332 3556777888 No 33 >protein:vir:94426 Length: 409 # NCBI annotation: ORF009 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1506 # MgeName: 47 # Cross-refs: genbank:acc:YP_240003;genbank:gi:66395665;genbank:GeneID:5133086 Probab=100.00 E-value=4e-95 Score=538.09 Aligned_cols=404 Identities=25% Similarity=0.367 Sum_probs=346.9 Q ss_pred Ccchhhhcccccc-c-cccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCccee Q lcl|Aclame:pro 1 MLLERMFEKRSGS-S-DHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIER 78 (416) Q Consensus 1 m~~~~~f~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 78 (416) |.=.+++.+.... - .........+.+ +......+...++.+.|+++++|++||++||++||++||++++.++ T Consensus 1 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~a~~~~~v~~~i~~Ia~~ia~lp~~~~~~~~----- 74 (409) T protein:vir:94 1 MAKENIVTRIKKKLIDNWIDQSASKLYD-FSPWKNKSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK----- 74 (409) T ss_pred CcccccchhhhhHHhhhhhcCCcccccc-cccccCccccccchhhhhccHHHHHHHHHHHHhhhhCceeEeeccc----- Confidence 5544444422110 0 000000000111 1111123445578889999999999999999999999999998654 Q ss_pred eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEe-eCC Q lcl|Aclame:pro 79 KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTV-LNG 157 (416) Q Consensus 79 ~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~-~~~ 157 (416) ..+|+++++|+.+||++||+++||+.++.+++++||+|+++.|+..|+|.+|+|++|+.|++..+.+++.++|.+. ..+ T Consensus 75 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~g 154 (409) T protein:vir:94 75 VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAATG 154 (409) T ss_pred ccchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcCCc Confidence 3578999999999999999999999999999999999999999999999999999999999999888887777664 445 Q ss_pred eeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHh Q lcl|Aclame:pro 158 KAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRV 236 (416) Q Consensus 158 ~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~ 236 (416) ..+.+++++|||+|++ +.++++|+||+..+.++++...++.++. ++.++..++++++.++.+++++.+++++.|++. T Consensus 155 ~~~~~~~~dvih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~~~~ 232 (409) T protein:vir:94 155 NKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQVLEDFKQY 232 (409) T ss_pred eEEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCeeEEecCCCCCHHHHHHHHHHHHHH Confidence 6778999999999976 5688999999999999999999998885 556666678899999999999999999999875 Q ss_pred h-cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 237 N-KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNF 315 (416) Q Consensus 237 ~-~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i 315 (416) + ++++++|+++|++|++++++++|+|++|.+++++++||++|||||.+||..+++++++.|++.+.|+++||.|++++| T Consensus 233 ~~~~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~sn~e~~~~~f~~~~l~P~~~~i 312 (409) T protein:vir:94 233 YEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLPIVKQY 312 (409) T ss_pred hhcCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHHHHHHH Confidence 4 667899999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccc Q lcl|Aclame:pro 316 EQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFL 395 (416) Q Consensus 316 ~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~ 395 (416) +++||++|+++.++..+++++||.+++++.|.+++++++.+++++|+||+||+|+++|+||+||||++++++|++|++.. T Consensus 313 e~~ln~~Ll~~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~ggD~~~~~~n~~~~~~~ 392 (409) T protein:vir:94 313 EEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLYPIDTP 392 (409) T ss_pred HHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeEeecccccccccc Confidence 99999999999998889999999999999999999999999999999999999999999999999999999999999887 Q ss_pred cccccccCCcccCCCCccCCC Q lcl|Aclame:pro 396 EEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 396 ~~~~~~~~~~~~~gge~~~~~ 416 (416) ...+.. ..+|++|.+|| T Consensus 393 ~~~~~~----~kGG~~n~~e~ 409 (409) T protein:vir:94 393 LELRKS----LKGGDKNVNES 409 (409) T ss_pred hhhccc----ccCCCCCcCCC Confidence 655543 23556888888 No 34 >protein:vir:81095 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1891 # MgeName: tp310-1 # Cross-refs: genbank:acc:YP_001429872;genbank:gi:156603925;genbank:GeneID:5525315 Probab=100.00 E-value=7.2e-95 Score=536.72 Aligned_cols=402 Identities=22% Similarity=0.335 Sum_probs=346.0 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.|.+.+++|+..... ..+.. +...+.+.....+..++.+.|+++++|++||++||+++|++||++++.+ .... T Consensus 1 Mg~f~~~~~r~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~~v~~cv~~Ia~~iA~~p~~~~~~~----~~~~ 74 (416) T protein:vir:81 1 MGIFYKNEKRDLQYNE-DDLQM-MVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNG----QINY 74 (416) T ss_pred CCcccccccccccCCC-cchhH-HHHHhccccccCccccchhhhhcchHHHHHHHHHHHhhccCceEEecCc----cccc Confidence 9988777766543332 22222 3444445556677888999999999999999999999999999998633 2446 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeC---- Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLN---- 156 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~---- 156 (416) +|+++++|+.+||++||+++||+.++.+++++||||+++.|+..|+|.+|||++|+.|++..+.+|...++.+... T Consensus 75 ~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~~~ 154 (416) T protein:vir:81 75 SDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGN 154 (416) T ss_pred cchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEEEEecCCCc Confidence 7899999999999999999999999999999999999999999999999999999999999988877766554322 Q ss_pred CeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-CHHHHHHHHHHHHH Q lcl|Aclame:pro 157 GKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-DEKPKENVRKEWKR 235 (416) Q Consensus 157 ~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~~~ 235 (416) +..+.+++++|||+|+++.++++|+||+..+.++++...++.+++.++|+||++|++++++++.+ ++++.+++++.|++ T Consensus 155 ~~~~~~~~~evihir~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~~~~~~~ 234 (416) T protein:vir:81 155 NIERNVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFHK 234 (416) T ss_pred eeEEEEccccEEEeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHHHHHHHH Confidence 23467999999999998889999999999999999999999999999999999999999999887 56778889988876 Q ss_pred hh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 236 VN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPW 311 (416) Q Consensus 236 ~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~ 311 (416) .+ ++|+++||++|++|++++++++|+|++|.+++++++||++|||||.++|... ++ ++.+++. .++..||.|+ T Consensus 235 ~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~-~~~~~~~-~~~~~~l~P~ 311 (416) T protein:vir:81 235 SFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-AN-MSITDAN-LDYLSTLKPY 311 (416) T ss_pred HhcCccccCceeecCCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCC-CC-ccHHHHH-HHHHHHHHHH Confidence 64 5678999999999999999999999999999999999999999999998643 23 2345544 5566799999 Q ss_pred HHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC--eEeeccCc Q lcl|Aclame:pro 312 IVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD--KYISSLNY 389 (416) Q Consensus 312 ~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd--~~~~~~n~ 389 (416) +.+|+++||++|+++. .+++++||++.|++.|.+++++++.+++++|+||+||+|+++|+||+|||| .+++++|+ T Consensus 312 ~~~ie~~ln~~l~~~~---~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~~gd~~~~~~~~n~ 388 (416) T protein:vir:81 312 ITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNH 388 (416) T ss_pred HHHHHHHHhhhccccc---cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeecccc Confidence 9999999999998754 367899999999999999999999999999999999999999999999987 68999999 Q ss_pred cccccccccccccCCc---ccCCCCccC Q lcl|Aclame:pro 390 VFLDFLEEYQRLKAGG---AMKGGDNKN 414 (416) Q Consensus 390 ~~~~~~~~~~~~~~~~---~~~gge~~~ 414 (416) +|++..++++..+.+. ..+|||.++ T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~kgGe~n~ 416 (416) T protein:vir:81 389 VNIELVDEYQMNKSRATDKKLKGGEENE 416 (416) T ss_pred cccccccccCcccccccccccCCCCCCC Confidence 9999998877666543 567888666 No 35 >protein:vir:4598 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:101 # MgeName: PVL # Cross-refs: genbank:acc:NP_058443;genbank:gi:9635169;genbank:GeneID:1262702 Probab=100.00 E-value=7.2e-95 Score=536.72 Aligned_cols=402 Identities=22% Similarity=0.335 Sum_probs=346.0 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.|.+.+++|+..... ..+.. +...+.+.....+..++.+.|+++++|++||++||+++|++||++++.+ .... T Consensus 1 Mg~f~~~~~r~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~~v~~cv~~Ia~~iA~~p~~~~~~~----~~~~ 74 (416) T protein:vir:45 1 MGIFYKNEKRDLQYNE-DDLQM-MVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNG----QINY 74 (416) T ss_pred CCcccccccccccCCC-cchhH-HHHHhccccccCccccchhhhhcchHHHHHHHHHHHhhccCceEEecCc----cccc Confidence 9988777766543332 22222 3444445556677888999999999999999999999999999998633 2446 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeC---- Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLN---- 156 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~---- 156 (416) +|+++++|+.+||++||+++||+.++.+++++||||+++.|+..|+|.+|||++|+.|++..+.+|...++.+... T Consensus 75 ~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~~~ 154 (416) T protein:vir:45 75 SDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGN 154 (416) T ss_pred cchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEEEEecCCCc Confidence 7899999999999999999999999999999999999999999999999999999999999988877766554322 Q ss_pred CeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-CHHHHHHHHHHHHH Q lcl|Aclame:pro 157 GKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-DEKPKENVRKEWKR 235 (416) Q Consensus 157 ~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~~~ 235 (416) +..+.+++++|||+|+++.++++|+||+..+.++++...++.+++.++|+||++|++++++++.+ ++++.+++++.|++ T Consensus 155 ~~~~~~~~~evihir~~~~d~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~~~~~~~ 234 (416) T protein:vir:45 155 NIERNVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFHK 234 (416) T ss_pred eeEEEEccccEEEeccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHHHHHHHH Confidence 23467999999999998889999999999999999999999999999999999999999999887 56778889988876 Q ss_pred hh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 236 VN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPW 311 (416) Q Consensus 236 ~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~ 311 (416) .+ ++|+++||++|++|++++++++|+|++|.+++++++||++|||||.++|... ++ ++.+++. .++..||.|+ T Consensus 235 ~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~-~~~~~~~-~~~~~~l~P~ 311 (416) T protein:vir:45 235 SFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIET-AN-MSITDAN-LDYLSTLKPY 311 (416) T ss_pred HhcCccccCceeecCCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCC-CC-ccHHHHH-HHHHHHHHHH Confidence 64 5678999999999999999999999999999999999999999999998643 23 2345544 5566799999 Q ss_pred HHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC--eEeeccCc Q lcl|Aclame:pro 312 IVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD--KYISSLNY 389 (416) Q Consensus 312 ~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd--~~~~~~n~ 389 (416) +.+|+++||++|+++. .+++++||++.|++.|.+++++++.+++++|+||+||+|+++|+||+|||| .+++++|+ T Consensus 312 ~~~ie~~ln~~l~~~~---~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~~gd~~~~~~~~n~ 388 (416) T protein:vir:45 312 ITCVCAELNFKFNDEY---VNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNH 388 (416) T ss_pred HHHHHHHHhhhccccc---cCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeecccc Confidence 9999999999998754 367899999999999999999999999999999999999999999999987 68999999 Q ss_pred cccccccccccccCCc---ccCCCCccC Q lcl|Aclame:pro 390 VFLDFLEEYQRLKAGG---AMKGGDNKN 414 (416) Q Consensus 390 ~~~~~~~~~~~~~~~~---~~~gge~~~ 414 (416) +|++..++++..+.+. ..+|||.++ T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~kgGe~n~ 416 (416) T protein:vir:45 389 VNIELVDEYQMNKSRATDKKLKGGEENE 416 (416) T ss_pred cccccccccCcccccccccccCCCCCCC Confidence 9999998877666543 567888666 No 36 >protein:vir:7853 Length: 518 # NCBI annotation: gp10 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817460;genbank:gi:29565889;genbank:GeneID:1259085 Probab=100.00 E-value=9.6e-95 Score=536.03 Aligned_cols=409 Identities=19% Similarity=0.275 Sum_probs=344.7 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccc------cccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGE------RVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDG 74 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 74 (416) |+|.+=+..-+... .....++.+.+++.+. .+. .+....|+++++|++||++||++||++||++|+.+++ T Consensus 1 ~~~~~~~~~~~p~~---~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~V~acV~~IA~~iA~lp~~l~~~~~~ 76 (518) T protein:vir:78 1 MLLANGQTLSAPAM---AELSPQMQDSYYYAPA-VGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) T ss_pred CcccCceeeccchh---hhhhhhhhhcccccce-eceecccccchhhHHhhhhHHHHHHHHHHHHhhccCceEEEEEcCC Confidence 88886554222211 1112234444443322 222 3344668899999999999999999999999999887 Q ss_pred cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEe Q lcl|Aclame:pro 75 GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTV 154 (416) Q Consensus 75 ~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 154 (416) +..+. .++.+.+|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|||++|++|++..+.+++..+|.+. T Consensus 77 ~~~~~-~~~~~~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~~~G~~~~L~~l~p~~Vtv~~~~~~~~~~y~~~ 155 (518) T protein:vir:78 77 TETEE-HDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQ 155 (518) T ss_pred ccccc-cchHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEECCCceEEEEcCCCCEEEEEEE Confidence 76655 55666778899999999999999999999999999999999999999999999999999999988777777665 Q ss_pred eC----CeeEEechhheeeeccCCCCcc-ccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHH Q lcl|Aclame:pro 155 LN----GKAIELYDYEVLHFKGLSTDGI-HGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENV 229 (416) Q Consensus 155 ~~----~~~~~~~~~~vih~~~~~~~~~-~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~ 229 (416) .. +..+.|++++|||+|++++++. +|+||+..+..++....++.+++.++|+||++|+++++.++.+++++.+++ T Consensus 156 ~~~~~~~~~~~~~~~eIiHir~~~~dg~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~Ng~~p~gvl~~~~~ls~e~~~~~ 235 (518) T protein:vir:78 156 AGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRL 235 (518) T ss_pred ecCCccceeEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHHH Confidence 33 2456899999999999988875 799999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHH Q lcl|Aclame:pro 230 RKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVR 305 (416) Q Consensus 230 ~~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~ 305 (416) ++.|++.+ ++|+++||++|++|++++++++|+|++|.+++++++||++|||||.+||..+++|++|.|+++..|++ T Consensus 236 k~~~~~~~~G~~nag~~~vL~~G~~~~~l~~~~~d~q~le~r~~~~~eIa~afgVPp~~lg~~~~st~sn~e~~~~~f~~ 315 (518) T protein:vir:78 236 REQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYR 315 (518) T ss_pred HHHHHHHhcCcccCCceeEcCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccCCCCCchhHHHHHHHHHH Confidence 99998754 56889999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CCCeE Q lcl|Aclame:pro 306 NTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIE--NGDKY 383 (416) Q Consensus 306 ~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~--ggd~~ 383 (416) +||.|++.+|+++||++|++..+ .+++++||++.|++.|.+++++++.+++++|+||+||+|+++||||+| |||++ T Consensus 316 ~tL~P~~~~ie~eln~~L~~~~~--~~~~~~fd~~~Llr~D~~~r~~~~~~~~~~G~lT~NE~R~~~gl~pie~~~gD~~ 393 (518) T protein:vir:78 316 DTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADEL 393 (518) T ss_pred HHHHHHHHHHHHHHHHhhccccc--CcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCcee Confidence 99999999999999999998755 367899999999999999999999999999999999999999999986 79999 Q ss_pred eeccCcccccccccccc-------ccCCcccCCCCccC---CC Q lcl|Aclame:pro 384 ISSLNYVFLDFLEEYQR-------LKAGGAMKGGDNKN---EG 416 (416) Q Consensus 384 ~~~~n~~~~~~~~~~~~-------~~~~~~~~gge~~~---~~ 416 (416) +++.|++|++....... .+++.....++++. ++ T Consensus 394 ~v~~n~~pl~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 436 (518) T protein:vir:78 394 YANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSPPAS 436 (518) T ss_pred eecccceecccccccccCCCCCCCCCCCCcccccccccCcccc Confidence 99999999876543211 11111111111111 11 No 37 >protein:vir:1326 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:28 # MgeName: phi-C31 # Cross-refs: genbank:acc:NP_047925;swissprot:trembl:q9zxb2;genbank:gi:9631143;uniprot:Q9ZXB2;genbank:GeneID:2715872 Probab=100.00 E-value=4.9e-94 Score=532.13 Aligned_cols=411 Identities=27% Similarity=0.437 Sum_probs=344.6 Q ss_pred Ccc-hhhhccccccc------cccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 MLL-ERMFEKRSGSS------DHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~~-~~~f~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) |.| +++|++..... ......+..+..+ +..+.+++.|+.+.|+++++|++||++||++||++|+++|+.++ T Consensus 1 Mg~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~V~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~ 78 (457) T protein:vir:13 1 MGFWSALFGRGHSPALDGIEARAWEPYDPSIYNL--GAVAASGETVTPHDALQVSAVFASVRLLSETIATLPLSTYSKRG 78 (457) T ss_pred CchhhhhhcccccccccccccccccccchHHHhh--cccccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEecC Confidence 985 55555433221 1111122333332 33566789999999999999999999999999999999999988 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcE---EE Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGM---LW 150 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~---~~ 150 (416) +++.+..+|+++.+++.+|| +||+++||+.++.+++++||+|++|.++ .|++.+|||++|+.|++..+..++. .+ T Consensus 79 ~~~~~~~~~~l~~~ln~~~n-~~t~~~f~~~~~~~lll~Gna~~~i~~~-~g~~~~l~~l~p~~v~v~~~~~~~~~~~~~ 156 (457) T protein:vir:13 79 GSRKEIVTPEWLDYPNAEPG-GMGRIDILSQTVLSLLLQGNAFLAVRWQ-GPNIVGLDVLDPTKIHVHMVMVDGLRRKVF 156 (457) T ss_pred CcccccccchHHHhccccCC-CCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEccCceEEEEecCCCccceeE Confidence 87777778888888876666 7999999999999999999999999776 5999999999999999987765542 22 Q ss_pred --EEEeeCCee---EEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHH Q lcl|Aclame:pro 151 --YQTVLNGKA---IELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEK 224 (416) Q Consensus 151 --~~~~~~~~~---~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e 224 (416) |.+...+.. ..+++++|||+++++.++ ++|+||+..+..+|....++.+++.++|+||++|++++++++.++++ T Consensus 157 ~~y~~~~~~~~~~~~~~~~~diih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~ls~e 236 (457) T protein:vir:13 157 EAYDIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGSKFFANGAMPGAVVEVPGTMSEE 236 (457) T ss_pred EEEEEecCCceeeEEeeCccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcCCCCCHH Confidence 333333332 358899999999998876 89999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc--ccHHH Q lcl|Aclame:pro 225 PKENVRKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF--SNIEH 298 (416) Q Consensus 225 ~~~~~~~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~--s~~e~ 298 (416) +.+++++.|++.+ ++++++||++|++|++++++++|++++|.+++++++||++|||||.+||..+++++ +|.|+ T Consensus 237 ~~~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~eq 316 (457) T protein:vir:13 237 GLARAREAWRAANSGVDNAHRVALLTEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLISDATNSTSWGSGLAE 316 (457) T ss_pred HHHHHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCcccccchHHH Confidence 9999999998764 56889999999999999999999999999999999999999999999998888765 88999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 299 QSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIE 378 (416) Q Consensus 299 ~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ 378 (416) +...|+++||.|+++.||++||++|+++.+. .+++++||+++|++.|.+++++++.+++++|+||+||+|+++||||+| T Consensus 317 ~~~~f~~~tl~P~~~~ie~~ln~~L~~~~~~-~~~~i~fd~~~l~~~D~~~r~~~~~~~~~~G~~T~NE~R~~~gl~Pi~ 395 (457) T protein:vir:13 317 QNIAFTMFSLRPWLERIEAGFNRLLFAETAD-RFRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLP 395 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCcccc-CceeEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 9999999999999999999999999998775 578899999999999999999999999999999999999999999999 Q ss_pred CC--CeEeeccCccccccccccccccCCcc------------cCCCCccCCC Q lcl|Aclame:pro 379 NG--DKYISSLNYVFLDFLEEYQRLKAGGA------------MKGGDNKNEG 416 (416) Q Consensus 379 gg--d~~~~~~n~~~~~~~~~~~~~~~~~~------------~~gge~~~~~ 416 (416) || |++++|+|+.+++...+.+....+++ ++.|..++++ T Consensus 396 ~g~~d~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~ 447 (457) T protein:vir:13 396 DGLGEKYRVPLNLGEVGEEPEPEPAPAPPAIEPPAEEPDEEPEPEGKPDDEG 447 (457) T ss_pred CCcccceeeccccccccccccccccCCCCCCCCCccccCCCCCCCCCCcccc Confidence 87 99999999999876655443222211 1112222222 No 38 >protein:vir:101648 Length: 518 # NCBI annotation: gp11 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654766;genbank:gi:109302764;genbank:GeneID:4156082 Probab=100.00 E-value=7.9e-94 Score=531.02 Aligned_cols=409 Identities=19% Similarity=0.281 Sum_probs=341.3 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccc------cccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGE------RVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDG 74 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 74 (416) |+|-+ ....++.........+.+.+++.+. .+. .+....|+++++|++||++||++||++||++|+.+++ T Consensus 1 ~~~~~---~~~~~~p~~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~V~acV~~IA~~iA~lpl~l~~~~~~ 76 (518) T protein:vir:10 1 MLLAN---GQTLSAPAMAELSPQMQDSYYYAPA-VGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSGD 76 (518) T ss_pred CcccC---ceeecCchhhhhhhhhhcccccccc-cceecccccchhhHHHhhhHHHHHHHHHHHHhhccCceEEEEEcCC Confidence 77653 1222222111122333444333222 122 2334568899999999999999999999999999887 Q ss_pred cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEe Q lcl|Aclame:pro 75 GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTV 154 (416) Q Consensus 75 ~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 154 (416) +..+.. ++.++.|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|+|++|+.|++..+.+++.++|.+. T Consensus 77 ~~~~~~-~~~~~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~~~G~~~~L~~l~p~~v~v~~~~~~~~~~y~~~ 155 (518) T protein:vir:10 77 TETEES-DTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQ 155 (518) T ss_pred Cceecc-chHHHHHHcCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCCceEEEEcCCCCEEEEEEE Confidence 766554 4555677789999999999999999999999999999999999999999999999999999988777777665 Q ss_pred eC----CeeEEechhheeeeccCCCCcc-ccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHH Q lcl|Aclame:pro 155 LN----GKAIELYDYEVLHFKGLSTDGI-HGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENV 229 (416) Q Consensus 155 ~~----~~~~~~~~~~vih~~~~~~~~~-~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~ 229 (416) .. +..+.+++++|||+|+++.++. +|+||+..+..++....++++++.++|+||++|+++++.++.+++++.+++ T Consensus 156 ~~~~~~~~~~~~~~~eViHir~~s~dg~~~G~spi~~a~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~ls~e~~~~~ 235 (518) T protein:vir:10 156 AGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSEAAQQRL 235 (518) T ss_pred ecCCccceEEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHHH Confidence 43 2457899999999999988885 799999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHH Q lcl|Aclame:pro 230 RKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVR 305 (416) Q Consensus 230 ~~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~ 305 (416) ++.|++.+ |+|+++||++|++|++++++++|+|++|.+++++++||++|||||.+||..+.+|++|.|++...|++ T Consensus 236 k~~~~~~~~G~~nag~v~vL~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~lg~~~~~t~sn~eq~~~~f~~ 315 (518) T protein:vir:10 236 REQFDRAHSGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYR 315 (518) T ss_pred HHHHHHHhcCccccCcceEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccCCCCCchhHHHHHHHHHH Confidence 99998654 56889999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CCCeE Q lcl|Aclame:pro 306 NTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIE--NGDKY 383 (416) Q Consensus 306 ~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~--ggd~~ 383 (416) +||.|++.+||++||++|++..+ .+++++||++.+++.|.+++++++.+++++|+||+||+|+++||||++ |||++ T Consensus 316 ~tL~P~l~~ie~~ln~~L~~~~~--~~~~~~fd~~~llr~D~~~r~~~~~~~~~~G~lT~NE~R~~~Gl~pie~~~gD~~ 393 (518) T protein:vir:10 316 DTMAIPIARIQSAMDKYVGQYWV--RKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADEL 393 (518) T ss_pred HHHHHHHHHHHHHHHHhhccccc--CCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCee Confidence 99999999999999999998755 367899999999999999999999999999999999999999999985 89999 Q ss_pred eeccCcccccccccccc-------ccCCcccCCCCccCCC Q lcl|Aclame:pro 384 ISSLNYVFLDFLEEYQR-------LKAGGAMKGGDNKNEG 416 (416) Q Consensus 384 ~~~~n~~~~~~~~~~~~-------~~~~~~~~gge~~~~~ 416 (416) +++.|+.|++....... .+++.....++++.+. T Consensus 394 ~~~~n~~pl~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 433 (518) T protein:vir:10 394 YANSALQPLGATPDGAVEGEEAPAPKRPASTPVASLDQSP 433 (518) T ss_pred eecccceecccccccccCCCCCCCCCCCCccccccccccc Confidence 99999999875433211 1111111111221111 No 39 >protein:vir:3868 Length: 417 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680485;swissprot:trembl:q8ltc2;genbank:gi:22296525;interpro:IPR006427;interpro:IPR006944;uniprot:Q8LTC2;genbank:GeneID:951699 Probab=100.00 E-value=1.8e-93 Score=529.08 Aligned_cols=399 Identities=23% Similarity=0.340 Sum_probs=336.6 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.|. +++....... +...+.+ .+..++..+..+ ...|+++++||+||++||++||++|+++++.+.++. .. T Consensus 1 m~~~---~~~~~~~~~~--~~~~~~~-~~~~~~~~g~~~-~~~Al~~~~V~~cv~~ia~~iA~lp~~~~~~~~~~~--~~ 71 (417) T protein:vir:38 1 MKLF---RGLATEVDPH--WADHLLD-SGVIPSFRGGYL-GISALRNSDVLTAVSIVSGDVSRFPLVITDSSTDEV--ID 71 (417) T ss_pred Cccc---cccccCCCcc--chhhhcc-cccccccCCcee-chhhcccHHHHHHHHHHHHhhccCeeEEEEcCCcce--ec Confidence 7764 4333333222 2111111 122223333333 357899999999999999999999999999876654 34 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC-CcEEEEEeeccceEEEEEcCCCcEEEEEEeeC-Ce Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH-GYPEALFPLRPDYTNAYVHPTTGMLWYQTVLN-GK 158 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~-g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~-~~ 158 (416) .|+++++|+.+||++||+++||+.++.+++++||+|++++|+.. |.|..|+|++|+.|++..+..+...|+..... +. T Consensus 72 ~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~y~~i~r~~~g~~~~~l~~l~p~~v~v~~~~~~~~~y~~~~~~~~~ 151 (417) T protein:vir:38 72 LANIEYLMNTKVNKRLSAYQWKFPMMVNAILTGNAYSRIVRDPITNEPAMFEFYAPSQTQVDTSDPDNIIYRFTPYNSSM 151 (417) T ss_pred cchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCEEEEEEEeCCceEEEEEcCCCeEEEEEEEcCCcE Confidence 68899999999999999999999999999999999999999864 77999999999999998877776665444333 33 Q ss_pred eEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhh- Q lcl|Aclame:pro 159 AIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVN- 237 (416) Q Consensus 159 ~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~- 237 (416) ...+++++|||+|+++.++++|+||+.++.+++.+..++.+++.++|+||++|+++++.++.+++++.+++++.|++.+ T Consensus 152 ~~~~~~~dviH~r~~~~d~~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~l~~e~~~~~~~~~~~~~~ 231 (417) T protein:vir:38 152 QKVCGFEDVIHWKFFSYDTIMGRSPLLSLGDEIGLQESGVSTLQKFFKSGLKGSIIKAKESRLSAEARQKIREDFERAQA 231 (417) T ss_pred EEEecCcceEEecCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHHHHHHhc Confidence 5678999999999998899999999999999999999999999999999999999999999999999999999998765 Q ss_pred --cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 238 --KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNF 315 (416) Q Consensus 238 --~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i 315 (416) ++|+++||++|++|++++++++|++++|.+++++++||++|||||.+||. .+++++.+++..+|+++||.|++++| T Consensus 232 g~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~--~~~~s~~e~~~~~~~~~tl~P~~~~i 309 (417) T protein:vir:38 232 GADAGSPIIVDATMDYQPLEVDTNVLNLINSNNYSTAQIAKALRVPAYRLAQ--NSPNQSVKQLADDYIRNDLPFYFEPI 309 (417) T ss_pred ccccCCceeccCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHhCC--CCcchhHHHHHHHHHHHHHHHHHHHH Confidence 56889999999999999999999999999999999999999999999984 56889999999999999999999999 Q ss_pred HHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC--CeEeeccCccccc Q lcl|Aclame:pro 316 EQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENG--DKYISSLNYVFLD 393 (416) Q Consensus 316 ~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~gg--d~~~~~~n~~~~~ 393 (416) |++|+++||++.++ .+++++||.+.+...+. ..+++++++|+||+||+|+++|+||+||| |++++|+|+++++ T Consensus 310 e~~l~~~Ll~~~~~-~~~~~~fd~~~l~~~~~----~~~~~~~~~G~~T~NE~R~~~gl~pi~~g~~d~~~~~~n~~~~d 384 (417) T protein:vir:38 310 TSEFELKLLDDAQR-HQYCIGFDTKSVNGLPI----ADVNTAVNGGLWTGNEGRAELGKKPLKDPNMDRIQSTLNTVFLD 384 (417) T ss_pred HHHHHhhhcChhhc-ccceEEechhhhhHHHH----HHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeecccccccc Confidence 99999999998775 46889999988765443 34677899999999999999999999987 8899999999999 Q ss_pred cccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 394 FLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 394 ~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ..++.+..+. .+.+|||++.|| T Consensus 385 ~~~~~~~~~~-~~~kgg~~~~~~ 406 (417) T protein:vir:38 385 QKEAYQAEHA-AELKGGDTNAKG 406 (417) T ss_pred cccccccccc-cccCCCCCCCCC Confidence 8888665433 455677776666 No 40 >protein:vir:9702 Length: 406 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795464;genbank:gi:28876227;genbank:GeneID:1257772 Probab=100.00 E-value=4.4e-92 Score=521.46 Aligned_cols=396 Identities=22% Similarity=0.315 Sum_probs=338.8 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |-|.+-++.+. . ..++.+..++++..+. .++...|+++++|++||++||++||++|+++++.+++ ... T Consensus 1 m~~f~~~~~~~---~---~~~~~~~~~~~~~~~~---~~~~~~Al~~~~V~~~i~~Ia~~iA~lp~~~~~~~g~---~~~ 68 (406) T protein:vir:97 1 MSFFQPLGTSK---V---SYDDYISSVLAGDVSQ---KYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGD---IIH 68 (406) T ss_pred CccccccCCCC---C---CcchHHHHHhcCCCCc---ccccchhhccHHHHHHHHHHHHhhhhCeeEEEecCcc---ccc Confidence 87765433221 1 2233344455554443 3444568999999999999999999999988765432 446 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC-CCcEEEEEeeccceEEEEEcCCCcEEEEEE-eeCCe Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS-HGYPEALFPLRPDYTNAYVHPTTGMLWYQT-VLNGK 158 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~-~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~-~~~~~ 158 (416) +|+++++|+.+||++||+++||+.++.+++++||||+++.|+. .|++.+|+|++|+.|++..++++...|... ...+. T Consensus 69 ~~~~~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gnay~~i~r~~~~g~~~~L~~i~p~~v~v~~~~~~~~~y~~~~~~~~~ 148 (406) T protein:vir:97 69 DEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHEIVYTFTDMLTAK 148 (406) T ss_pred cchHHHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCCCeEEEEEEECCCeeEEEEcCCceEEEEEEecCCce Confidence 7999999999999999999999999999999999999999984 689999999999999998887766554332 34556 Q ss_pred eEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhh- Q lcl|Aclame:pro 159 AIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVN- 237 (416) Q Consensus 159 ~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~- 237 (416) .+.+++++|||+|+++.++++|+||+..+.+++..+.+++++..++|+||+.|++++..++.+++++.+++++.|++.. T Consensus 149 ~~~~~~~evih~r~~~~dg~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~~i~~~~~~l~~e~~~~~~~~~~~~~~ 228 (406) T protein:vir:97 149 QVKCFAHDVIHWKFFSHDTILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEFEKMRE 228 (406) T ss_pred EEEEccccEEEecCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEecCCCCCHHHHHHHHHHHHHHhc Confidence 7789999999999988899999999999999999999999999999999999999999999999999999999998765 Q ss_pred --cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 238 --KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNF 315 (416) Q Consensus 238 --~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i 315 (416) ++|+++||++|++|++++++++|++++|.+++++++||++|||||.+||. .+++++.+++.+.|+.+||.|++++| T Consensus 229 g~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~--~~~~~~~e~~~~~f~~~~l~P~~~~i 306 (406) T protein:vir:97 229 GSVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGV--NSPNQSVAQLMEDYVTNDLPFYFDAI 306 (406) T ss_pred ccccCceeecCCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHcCC--CCCcchHHHHHHHHHHHHHHHHHHHH Confidence 45789999999999999999999999999999999999999999999985 45678999999999999999999999 Q ss_pred HHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCccccc Q lcl|Aclame:pro 316 EQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLD 393 (416) Q Consensus 316 ~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~ 393 (416) |++|+++|+++.++ .+++++||++++ .+.+++.+.+++++|+||+||+|+++|+||+++ ||++++|+|++|++ T Consensus 307 e~~l~~kll~~~~~-~~~~i~fd~~~~----~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p~~~~~gD~~~~~~n~~~~~ 381 (406) T protein:vir:97 307 TSELGLKTLNDKDR-RLYHIEFDTRSV----TGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYVFLD 381 (406) T ss_pred HHHHhhhhcChhhc-cceeEEEecCcc----chhhHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeEeeccCccchh Confidence 99999999998765 468899997664 455567788899999999999999999999966 99999999999999 Q ss_pred cccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 394 FLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 394 ~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ..+++|.... ++.+|||+++++ T Consensus 382 ~~~~~~~~~~-~~~~gg~~~~~~ 403 (406) T protein:vir:97 382 KKEEYQDKVG-IKGKGGEVNAEE 403 (406) T ss_pred cccccccccc-cccCCCCCCCCC Confidence 9877655444 456788888777 No 41 >protein:vir:81218 Length: 423 # NCBI annotation: gp3, phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456733;genbank:gi:157168376;interpro:IPR006427;interpro:IPR006944;uniprot:Q9MBK2;genbank:GeneID:5580341 Probab=100.00 E-value=4.6e-92 Score=521.33 Aligned_cols=401 Identities=18% Similarity=0.265 Sum_probs=332.2 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccccccc-ccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcc-ee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGER-VSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI-ER 78 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~-~~ 78 (416) |+|.++++.+.........+ .+.+.+....+..+.. +..+.++++|+|++||++||+++|++|+++|+.+++|. .+ T Consensus 1 Mg~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~ia~~ia~lp~~~~~~~~dg~~~~ 78 (423) T protein:vir:81 1 MGFLQKLGLAPSVVATPEPI--ELVGPIFESLKLSTKNMTVEQIWEDQPHLRTVTTFIARNVASLQLQAFERVEDGGRER 78 (423) T ss_pred CchhHhhccccccccCcccc--ccccccccccccccchhhHHHHHHhhhHHHHHHHHHHHhHhhCceEEEEEecCCceee Confidence 98888876544322221111 1333333333333333 34566678999999999999999999999998877665 44 Q ss_pred eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC--CcEEEEEeeccceEEEEEcCCC-cEEEEEEe- Q lcl|Aclame:pro 79 KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH--GYPEALFPLRPDYTNAYVHPTT-GMLWYQTV- 154 (416) Q Consensus 79 ~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~--g~~~~l~~l~p~~v~~~~~~~~-~~~~~~~~- 154 (416) ..+|+++.+| .+||++||+++||+.++.+++++||+|+++.|+.. +....|+|+++..+++....++ +.+.|.+. T Consensus 79 ~~~~~~~~ll-~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~rd~~~~~~~~~l~p~~~~~v~~~~~~~~~~~~~Y~~~~ 157 (423) T protein:vir:81 79 VREGHLARVC-KLANSDMTMYDLLERTMFDLCLYDEFFWLLPGDLGVDTPTLDIRPIPVSWVQRRAYKDGWGSLDYIIIE 157 (423) T ss_pred eccchHHHHh-hcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCcCcceEEEeecccceeeeeeccCCCcceEEEEEE Confidence 5566666655 68999999999999999999999999999998753 4667888999988887765543 33444432 Q ss_pred ---eCCeeEEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC-----cCCHHH Q lcl|Aclame:pro 155 ---LNGKAIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA-----FLDEKP 225 (416) Q Consensus 155 ---~~~~~~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~-----~~~~e~ 225 (416) ..+..+.+++++|||+|.++.++ .+|+||+..++++++...+++++..++|+||++|+++++.+. .+++++ T Consensus 158 ~~~~~g~~~~~~~~evih~r~~~~~~~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gvi~~~~~~~~~~l~~e~ 237 (423) T protein:vir:81 158 SGDNDGRSVKVPGERVIHRHGYNPKTMKRGKSPVQSLRDILGEQIEAAIFRAQMWRNGPRPGMVIMRDPESKAGKWDAES 237 (423) T ss_pred ecCCCceEEEEcccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcccCccCCHHH Confidence 24556789999999999887776 479999999999999999999999999999999999998653 578999 Q ss_pred HHHHHHHHHHhh-----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHH Q lcl|Aclame:pro 226 KENVRKEWKRVN-----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQS 300 (416) Q Consensus 226 ~~~~~~~~~~~~-----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~ 300 (416) .+++++.|++.+ ++|+++||++|++|++++++++|+|++|.+++++++||++|||||.+||..++++++|.|++. T Consensus 238 ~~~~~~~~~~~~~~~~~n~g~~~vl~~g~~~~~l~~s~~d~q~~e~~~~~~~eIa~~fgVPp~~lg~~~~~t~sn~e~~~ 317 (423) T protein:vir:81 238 RTRFMANLRASFSPKSSDVGGTLLLEDGMKAENFHTTSKDEQTVETTKLSLQTVAQVYGINPTMVGQLDNANYSNVREFR 317 (423) T ss_pred HHHHHHHHHHHhccccccCCcceecCCCceEEeccCChhhHHHHHHHHhhHHHHHHHhCCCHHHhcCCCCCCcccHHHHH Confidence 999999998764 457899999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCchhc-ccccchhhhhhhhhhccHHHHHHHHHHHH-hCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 301 IEYVRNTLQPWIVNFEQELNVKLFLDHDQ-KSGHYVKFNIDSELRGDSKTQAEYLKTLH-ETGVLNKDEIRELLERNPIE 378 (416) Q Consensus 301 ~~f~~~~l~P~~~~i~~~l~~~l~~~~~~-~~~~~~~f~~~~l~~~d~~~~~~~~~~~~-~~g~~t~NE~R~~~gl~p~~ 378 (416) +.|+++||.|++.+||++|+++|+++.+. ..+++++||.++|+++|.+++++++.+++ ++|+||+||+|+++||||+| T Consensus 318 ~~f~~~~L~P~~~~ie~~l~~~L~~~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~l~~~G~~T~NE~R~~~gl~p~~ 397 (423) T protein:vir:81 318 KALYGDNLGSWIRIIQDVMNLFLLPRVGIDNEKFYFEFNLEEKLRASFEEAAEIKRAAVGNVAWMTINEVRAMDNLPSID 397 (423) T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCccccccCccEEEecchhhhccCHHHHHHHHHHHHhCCCCcCHHHHHHHhCCCCCC Confidence 99999999999999999999999998765 45889999999999999999999999987 46999999999999999999 Q ss_pred CCCeEeeccCccccccccccccccCCcccCCCCc Q lcl|Aclame:pro 379 NGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDN 412 (416) Q Consensus 379 ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~ 412 (416) |||++++|+|+.+.+..+.+.. ..|+ T Consensus 398 gGD~~~~p~n~~~~~~~~~~~~--------~~~t 423 (423) T protein:vir:81 398 GGDDLARPLNTEFGDSEDAPGE--------EVET 423 (423) T ss_pred CcceeecccccccCccCCCCCC--------CCCC Confidence 9999999999988664332111 1111 No 42 >protein:vir:101647 Length: 460 # NCBI annotation: phage portal protein # Family: family:all:26542 # MgeID: mge:1646 # MgeName: 11b # Cross-refs: genbank:acc:YP_112492;genbank:gi:53793592;uniprot:Q5ZGG1;genbank:GeneID:3101755 Probab=100.00 E-value=1.5e-90 Score=512.95 Aligned_cols=401 Identities=18% Similarity=0.262 Sum_probs=343.1 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccc---cccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcce Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKT---ASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIE 77 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 77 (416) =++.|+++++..... .+.+.+...++...+ .++..++.+.|+++|+|++||++||+++|++||++|+.+.++.. T Consensus 3 ~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~v~~~v~~ia~~iA~lp~~v~~~~~~g~~ 79 (460) T protein:vir:10 3 NRIIRALRELTGLDN---KFNDAFIKYIGQTFTKYDNNGKTYLEQGYNINPDVYSCISQMAAKTVAVPYTIKVVKDTKAY 79 (460) T ss_pred hhHHHHHhhhhccCC---CchHHHHHhhccccCCCccchhhhhHHHHhcchHHHHHHHHHHHhhhhCceEEEeccCCccc Confidence 356677765443333 233445566654433 36677889999999999999999999999999999998877643 Q ss_pred ---------------------------eeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC----CCc Q lcl|Aclame:pro 78 ---------------------------RKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS----HGY 126 (416) Q Consensus 78 ---------------------------~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~----~g~ 126 (416) ...+++....|+.+||++||+++||+.++.+++++||||+++.|+. .|+ T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~~~~~G~ 159 (460) T protein:vir:10 80 QQLNNLNISTKGLYSFTQSLQKNRLDTKAFSETEKAFPLESPNPTQTWADIYSLYKTYMRLNGNCYFYLMSPDDGINAGV 159 (460) T ss_pred hhhhhhhhhhhhhHHHHHHhhcchhhhcccchhHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCCccCce Confidence 2234556677899999999999999999999999999999999954 478 Q ss_pred EEEEEeeccceEEEEEcCCCcEEE-------EEEeeCCeeEEechhheeeeccCCCC------ccccccHHHHHHHHHHH Q lcl|Aclame:pro 127 PEALFPLRPDYTNAYVHPTTGMLW-------YQTVLNGKAIELYDYEVLHFKGLSTD------GIHGKSPIGVVREHIGA 193 (416) Q Consensus 127 ~~~l~~l~p~~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~vih~~~~~~~------~~~G~s~~~~~~~~i~~ 193 (416) +.+|||++|+.|++..+.++...+ |.+..++....+++++|||+|+++++ +++|+||+..++.++.. T Consensus 160 ~~~L~~l~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~r~~~~~~~~~~~~~~G~sp~~~~~~~i~~ 239 (460) T protein:vir:10 160 PSQMYVLPAHLIKIVLKDDINLLSTDSPIKSYMLIQGDQFIEFNEDEVIHTKYANPNFDLQGSHLYGMSPIRAILRNINS 239 (460) T ss_pred eEEEEEEcCceEEEEEcCCCceeeeeeeeeEEEEecCceeEEecccceEEEecCCCCcccccCccccccHHHHHHHHHHH Confidence 999999999999999988876543 33445666789999999999976543 57999999999999999 Q ss_pred HHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHH Q lcl|Aclame:pro 194 QAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKF 269 (416) Q Consensus 194 ~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~ 269 (416) ..++.++..++|+||+.|+++++.++.+++++.+++++.|++.. ++|++++|++|++|++++++++|++++|.+++ T Consensus 240 ~~~~~~~~~~~f~ng~~~~~i~~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~ 319 (460) T protein:vir:10 240 QNSTIDNNVKTMQNGGVFGFIHGGSTGLTQPQADSLKQRLTEMDKSPDRLSQIAGASGEIAFTKISLNTDELKPFDYLKY 319 (460) T ss_pred HHHHHHHHHHHHhcCCCcceeeecCCCCCHHHHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhHHHHHHHHHH Confidence 99999999999999999999999999999999999999998764 56789999999999999999999999999999 Q ss_pred HHHHHHHHhccchhhcccccCC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhh--hhc Q lcl|Aclame:pro 270 NKAQISMIYKVPLHKLNELDKA--TFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSE--LRG 345 (416) Q Consensus 270 ~~~~Ia~~~gvp~~~lg~~~~~--~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l--~~~ 345 (416) ++++||++|||||.+||..+++ +++|.|++...|++.||.|++..||++||++|+++.+...+++++||++.+ ++. T Consensus 320 ~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~e~~~~~f~~~~l~P~~~~ie~~ln~kl~~~~~~~~~~~i~~d~~~l~~l~~ 399 (460) T protein:vir:10 320 DQKAICNALGWSDKLLNNNEGGGLNTGNLEEERKRVVTDNIQPDLVILKQAFDKKFIKRFKGYENAVIEWDISELPEMQT 399 (460) T ss_pred HHHHHHHHhCCCHHHhCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCceEEeecchhhhHHH Confidence 9999999999999999987654 689999999999999999999999999999999998888899999999988 344 Q ss_pred cHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCeEeeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 346 DSKTQAEYLKTLHETGVLNKDEIRELLERNPI--ENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 346 d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~--~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) |.++ ...++++|+||+||+|+++|+||+ ||||++++|+|++|++..++ +..++++|+++ T Consensus 400 d~~~----~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~-------~~~~~~~nq~~ 460 (460) T protein:vir:10 400 DMVA----MASWLNTIPVTPNEIRIAMKYETLNQDGMDIVFMPSNKVRIDDVSN-------NLIDSAFNQNQ 460 (460) T ss_pred HHHH----HHHHHhCCCCCHHHHHHHhCCCCCCCCCCCeeeecccccchhhccc-------ccCCCcccCCC Confidence 4443 345778999999999999999998 57999999999999987654 33467778888 No 43 >protein:vir:80134 Length: 403 # NCBI annotation: Phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1877 # MgeName: bacteriophage bv1 # Cross-refs: genbank:acc:YP_001425602;genbank:gi:155042935;genbank:GeneID:5469563 Probab=100.00 E-value=1.3e-87 Score=496.92 Aligned_cols=392 Identities=23% Similarity=0.316 Sum_probs=324.8 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccH-HHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSE-SNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) |.|.++|++++....... ...+..........+.. ..+..+|+|++||++||+++|++|+++|+..++|.. . T Consensus 1 Mg~~~~f~~k~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~I~~ia~~iA~~p~~~~~~~~~g~~-~ 73 (403) T protein:vir:80 1 MGLFNFFRRKTRSEPTNA------ISWFLTQEAYDTLAIPGYTRLSDNPEVRMAVHKIAELISSMTIHLMQNTDNGDI-R 73 (403) T ss_pred Ccccccccccccccccch------hhhhcccccccccccchhhhhhhhHHHHHHHHHHHHhhhhCceEEEEecCCcee-e Confidence 999999998764432221 11122222222222222 235578999999999999999999999998877654 4 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHc--CCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCC Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTW--GNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNG 157 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~--G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~ 157 (416) .+|+++++|+.+||++||+++||+.++.++++. ||||+++.++..|++.+|||++|+.|++..+.++..++|. T Consensus 74 ~~~~~~~lL~~~PN~~~t~~~f~~~~v~~~ll~~~Gna~i~~~~~~~g~~~~L~~l~p~~v~~~~~~~g~~~~y~----- 148 (403) T protein:vir:80 74 IKNELSRKIDINPYSLMTRKAWMYNIVYTMLLDGEGNSVVFPKYTTSGLIDELIPLAPSKVSFVDTDTGYQIWYQ----- 148 (403) T ss_pred cCChHHHHHhccCCcCCCHHHHHHHHHHHHhhcCCccEEEEEEEcCCCcEEEEEEEcCCeeEEEEcCCceEEEEe----- Confidence 689999999999999999999999999999985 7899999999999999999999999999988877554442 Q ss_pred eeEEechhheeeecc--CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHH Q lcl|Aclame:pro 158 KAIELYDYEVLHFKG--LSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKR 235 (416) Q Consensus 158 ~~~~~~~~~vih~~~--~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~ 235 (416) ...+++++|||++. .+.++++|+||+..+..++....++++++.++|+||++|+++++.++.+++++.+++++.|.+ T Consensus 149 -~~~~~~~eiih~~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~~~~~~~~~~~~~ 227 (403) T protein:vir:80 149 -GKAYNYDEVLHFIVNPDPEKPYMGRGYRVVLKDIVNNLKQATTTKKSFMSGKYMPSLIVKVDAATAELSSEEGRNAVFK 227 (403) T ss_pred -ecccchhhEEEEeccCCCcCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCChHHHHHHHHHHHH Confidence 34688999999994 355678999999999999999999999999999999999999999999998888877777654 Q ss_pred ----hhcCCceeecCCC-ceeEecc-CChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHH Q lcl|Aclame:pro 236 ----VNKVENIAIIDYG-LEYQSIS-MPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQ 309 (416) Q Consensus 236 ----~~~~~~~~vl~~g-~~~~~~~-~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~ 309 (416) ..++|++++++++ .++.++. ++++|++++|.+++++.+||++|||||.+||..+ +.+++..+|+++||. T Consensus 228 ~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-----~~~~~~~~f~~~~l~ 302 (403) T protein:vir:80 228 KYLEASEAGQPWIIPAELLDVEQVKPLSLKDLAIHETVELDKRTVAGIFGVPAFLLGVGK-----YDKDEYNNFINSTIL 302 (403) T ss_pred HHhhhhhcCCeeeecccccccceeccCCHHHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC-----ccHHHHHHHHHHHHH Confidence 4567888888765 4455543 5889999999999999999999999999998532 224566789999999 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCc Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNY 389 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~ 389 (416) |++++||++|+++||++.+ ++++||.+.|++.|.+++++++.+++++|+||+||+|+++||||+||||++++++|+ T Consensus 303 P~~~~ie~~l~~kll~~~~----~~~~f~~~~ll~~d~~~~~~~~~~~~~~Gi~t~NE~R~~~gl~p~~ggd~~~~~~n~ 378 (403) T protein:vir:80 303 PIAKGIEQELTRKLLISPD----LYFKFNPRSLYAYDLKELAEVGSNMYVRGLMEGNEVRDWLGLSPKEGLSELVILENY 378 (403) T ss_pred HHHHHHHHHHHHhccCCCC----cEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeecccc Confidence 9999999999999998644 679999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 390 VFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 390 ~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) +|++..++.+..+. +..+|+++++| T Consensus 379 ~pl~~~~~~~~~k~-ge~~~~~~~~~ 403 (403) T protein:vir:80 379 IPLDKIGDQNKLKG-GEKGGADGQTD 403 (403) T ss_pred cchhhccchhhccC-CCCCCCCCCCC Confidence 99998777655443 33444455555 No 44 >protein:vir:95378 Length: 406 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1567 # MgeName: GBSV1 # Cross-refs: genbank:acc:YP_764474;genbank:gi:115334628;genbank:GeneID:5179265 Probab=100.00 E-value=3.2e-87 Score=494.76 Aligned_cols=396 Identities=21% Similarity=0.255 Sum_probs=333.1 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.|...|++......... .......+..+.+.++..++...++++++|++||++||+++|++||++|+.+++++. .. T Consensus 1 Mg~f~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~-~~ 77 (406) T protein:vir:95 1 MGLFDRWRRTKRKSKIRA--DTGYVGLFMSGEDVSFLVPGYVRLSDNPEVRMAVHKIADLISSMTIYLMQNTEDGDI-RI 77 (406) T ss_pred Ccchhhhccccccccccc--cchhhhhhccCcccCccccCHHHHhhcHHHHHHHHHHHHhhccCceEEEEecCCcce-ee Confidence 988887764443222222 223344555556667777888999999999999999999999999999999877654 57 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCe--EEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCe Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNA--YSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGK 158 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~--~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 158 (416) +|+++++|+.+||++||+++||+.++.+++++|++ |+++.|+..|++.+|||++|++|++..+.++.. +..+ T Consensus 78 ~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~g~g~a~~~~~~~~~g~~~~l~~i~~~~v~~~~~~~~~~----~~~~-- 151 (406) T protein:vir:95 78 RNELSRKIDITPYSLMTRKSWMYNIVYTMLLDGEGNSVVFPKYTADGLIDELVPLTPSKVNFLDTPDGYQ----VLYG-- 151 (406) T ss_pred cchHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCceEEEEEEECCCCcEEEEEEEcCceeEEEEcCCeEE----EEec-- Confidence 89999999999999999999999999999999765 556788999999999999999999998877532 2222 Q ss_pred eEEechhheeeeccC--CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHh Q lcl|Aclame:pro 159 AIELYDYEVLHFKGL--STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRV 236 (416) Q Consensus 159 ~~~~~~~~vih~~~~--~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~ 236 (416) ...+++++|||++++ +.++++|+||+..+..++....++.+++.++|+||++|+++++.++.+++++.+++++.|.+. T Consensus 152 ~~~~~~~evih~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~l~~e~~~~~~~~~~~~ 231 (406) T protein:vir:95 152 GQTFNYDEVLHFIYNPDPERPYIGRGYRVVLKDIADNLKQATATKKSFMSGKYMPSLIVKVDAATAELSSEEGRNAVFKK 231 (406) T ss_pred cEEEchhHEEEeeccCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHHHH Confidence 347999999999953 456889999999999999999999999999999999999999999999999999999988765 Q ss_pred h----cCCceeecC-CCceeEec-cCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHH Q lcl|Aclame:pro 237 N----KVENIAIID-YGLEYQSI-SMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQP 310 (416) Q Consensus 237 ~----~~~~~~vl~-~g~~~~~~-~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P 310 (416) + ++++++|++ +|.+++++ .++++|+|+.|.+++++++||++|||||.+||.. ++.+++..+|+++||.| T Consensus 232 ~~g~~n~~~~~v~~~~~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~-----~~~~~~~~~~~~~~l~P 306 (406) T protein:vir:95 232 YLQATEAGQPWIIPAELLEVEQVKPLSLKDIAINEAVELDKRTVAGMFGVPAFLLGIG-----EFNRDEYNNFINSTILP 306 (406) T ss_pred hccccccCCceeecCCCccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCC-----CchHHHHHHHHHHHHHH Confidence 4 567788775 45667775 4789999999999999999999999999999753 34578889999999999 Q ss_pred HHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcc Q lcl|Aclame:pro 311 WIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYV 390 (416) Q Consensus 311 ~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~ 390 (416) ++++|+++||++||++. +++++||++++++.|.+++++.+.+++++|+||+||+|+++|+||+||||++++|+|++ T Consensus 307 ~~~~ie~~l~~~l~~~~----~~~~~fd~~~l~~~d~~~~~~~~~~l~~~G~~t~NE~R~~~gl~p~~~gd~~~~~~n~~ 382 (406) T protein:vir:95 307 IAKGIEQELTRKLLISP----DLYFKFNPRSLYAYDLKELAEVGSNMYVRGIMEGNEVRDWLGLSPKEGLSELVILENYI 382 (406) T ss_pred HHHHHHHHHHHhcCCCC----CcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccCcc Confidence 99999999999999764 46899999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 391 FLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 391 ~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) |++..++.+..+.|+. +|.++++| T Consensus 383 ~~~~~~~~~~~k~g~~-~~~~~~~~ 406 (406) T protein:vir:95 383 PLDKIGDQSKLKGGDN-SGADGQTD 406 (406) T ss_pred chhhcccccccCCCCC-CCCCCCCC Confidence 9988776555433322 11122222 No 45 >protein:vir:9359 Length: 348 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:166 # MgeName: phi 12 # Cross-refs: genbank:acc:NP_803337;genbank:gi:29028648;genbank:GeneID:1258089 Probab=100.00 E-value=3.5e-87 Score=494.58 Aligned_cols=345 Identities=25% Similarity=0.397 Sum_probs=315.5 Q ss_pred hccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEE Q lcl|Aclame:pro 61 IAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNA 140 (416) Q Consensus 61 ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~ 140 (416) ||++|+++++.++ ..+|+++++|+.+||++||+++||+.++.+++++||||+++.|+..|+|.+|+|++|+.|++ T Consensus 1 ia~lp~~~~~~~~-----~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~~l~~~~v~~ 75 (348) T protein:vir:93 1 MASLPLKMYEDYK-----VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEM 75 (348) T ss_pred CcccceEeEecCc-----CcccHHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCCceEE Confidence 9999999998543 46799999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCCCcEEEEEEe-eCCeeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC Q lcl|Aclame:pro 141 YVHPTTGMLWYQTV-LNGKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP 218 (416) Q Consensus 141 ~~~~~~~~~~~~~~-~~~~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~ 218 (416) ..+.+++.++|.+. ..+..+.+++++|||+|++ +.++++|+|++..+..+++...++.++. ++.++..++++++.+ T Consensus 76 ~~~~~~~~~~y~~~~~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~ 153 (348) T protein:vir:93 76 LIENQSRELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYG 153 (348) T ss_pred EEeCCCcEEEEEEEcCCCeEEEEccccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHH--HHhcCCCceeEEecC Confidence 99988887776654 4456778999999999986 5578999999999999999999998886 444455567888999 Q ss_pred CcCCHHHHHHHHHHHHHhh-cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHH Q lcl|Aclame:pro 219 AFLDEKPKENVRKEWKRVN-KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIE 297 (416) Q Consensus 219 ~~~~~e~~~~~~~~~~~~~-~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e 297 (416) +.+++++.+++++.|++.+ ++++++|+++|++|++++++++|+|+.|.+++++++||++|||||.+||..++++++++| T Consensus 154 ~~l~~e~~~~~~~~~~~~~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~e 233 (348) T protein:vir:93 154 SNVSTEKRQQVLEDFKQYYEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSNTNFAKNE 233 (348) T ss_pred CCCCHHHHHHHHHHHHHHhhcCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHH Confidence 9999999999999998765 567899999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC Q lcl|Aclame:pro 298 HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPI 377 (416) Q Consensus 298 ~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~ 377 (416) +++++|+++||.|+++.|+++||++||++.++..+.+|+||.+++++.|.+++++++.+++++|+||+||+|+++|+||+ T Consensus 234 ~~~~~~~~~~l~P~~~~ie~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~a~~~~~~~~~G~~T~NE~R~~~g~~p~ 313 (348) T protein:vir:93 234 ELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPV 313 (348) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCC Confidence 99999999999999999999999999999999889999999999999999999999999999999999999999999999 Q ss_pred CCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 378 ENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 378 ~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ||||++++++|+.|++...+.+... .+|++|.+|| T Consensus 314 ~ggD~~~~~~n~~~~~~~~~~~~~~----~gg~~n~~~~ 348 (348) T protein:vir:93 314 EGGDKPLISGDLYPIDTPLELRKSL----KGGDKNVNES 348 (348) T ss_pred CCcCeEeecccccccccchhhcccc----cCCCCCcCCC Confidence 9999999999999998877665433 3556677777 No 46 >protein:vir:102727 Length: 945 # NCBI annotation: portal protein # Family: family:all:2446 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874016;genbank:gi:118197623;genbank:GeneID:4495919 Probab=100.00 E-value=1.3e-85 Score=485.91 Aligned_cols=411 Identities=14% Similarity=0.183 Sum_probs=321.1 Q ss_pred Ccchh--hhccccccccc----cccchhHHHhhhc----------CccccccccccHHHHhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MLLER--MFEKRSGSSDH----EDGFNNILLNMFG----------GRKTASGERVSESNSLVQPDIFACVNVLSDDIAKL 64 (416) Q Consensus 1 m~~~~--~f~~~~~~~~~----~~~~~~~~~~~~~----------~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~ 64 (416) ++|+. ..+ ++....+ ...+...+....+ ......+..++.+.++++++|++||++||+++|++ T Consensus 63 ~~~~~~~~~k-k~~i~~pfkkk~~~~~~d~f~~s~es~s~vtsls~pdaf~~vnVs~~~AlknsaV~scI~~IA~sIAsL 141 (945) T protein:vir:10 63 IIFRKNQVLK-KEKIIVPYNHQEPPFKFNLFEYSPESLMYLPSISDPDAFFLINLFRKYRFNNDSKLIKVSEIPKKLTSK 141 (945) T ss_pred eeehhhhHHH-hhcccccccccccchhhhhhhccCccceecccccCccceeeehhhhhhhhccHHHHHHHHHHHhhhccC Confidence 33321 111 1111111 1111111111111 01111234577889999999999999999999999 Q ss_pred cceEEeecCCcc------eeeeccchhhhhccccccccCHHH----HHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeec Q lcl|Aclame:pro 65 PIHTYKRTDGGI------ERKPEHKSAHAVYARPNPYMTAFT----WKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLR 134 (416) Q Consensus 65 ~~~~~~~~~~~~------~~~~~~~~~~~l~~~PN~~~s~~~----f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~ 134 (416) |+++|+..+++. ....+|+++.+| .+||++||+.+ |+++++.+++++||+|+++.|+..|++.+|+|++ T Consensus 142 PlklYrr~edG~~~~~~kk~~~~hpL~~LL-~rPNp~mT~~eFwqsFl~~Lv~dLLL~GNAYieIiRd~~G~ii~L~pLd 220 (945) T protein:vir:10 142 ELEIYKHIEDKHVNYYLKRIRDARNILEFL-ERPDPYFSEVNSWEYLLGMVLDDILTIDRGAIVKIRDEQGNLVAITPVD 220 (945) T ss_pred ceEEEEecccCcccccccccccchHHHHHH-hCCCcccChhHHHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEC Confidence 999998876653 233467777766 59999999988 5567889999999999999999999999999999 Q ss_pred cceEEEEEcCCCcEEEE-EEeeCC-eeEEechhhee-eeccCCCCcc---ccccHHHHHHHHHHHHHHHHHHHHHHHh-c Q lcl|Aclame:pro 135 PDYTNAYVHPTTGMLWY-QTVLNG-KAIELYDYEVL-HFKGLSTDGI---HGKSPIGVVREHIGAQAAATKYNAKLYK-N 207 (416) Q Consensus 135 p~~v~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~vi-h~~~~~~~~~---~G~s~~~~~~~~i~~~~~~~~~~~~~~~-n 207 (416) |++|++..+++++..++ .+..++ ....++++++| |+++++.++. +|+||+.++++++....++++++.++|. | T Consensus 221 Ps~Vti~~ddDG~~~y~Yv~~idG~~~~~v~a~DvIlhirn~s~DG~~~GyGlSPIeaa~~aI~~alAaek~aar~FskN 300 (945) T protein:vir:10 221 GTTIKPILSEDTGIVVGYVQEVDGAIVAHFDKRDVVLFRQNLTPDVYMYGYSLPPIEILYKVILSDIFIDKGNLDYYRKG 300 (945) T ss_pred CcceEEEEcCCCcEEEEEEEecCCceEEEecCCceEEEeccCCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhC Confidence 99999999988877653 333333 34567777755 6667777764 4999999999999999999999999995 7 Q ss_pred cCCcceeeccC----------CcCCHHHHHHHHHHHHHhh---cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHH Q lcl|Aclame:pro 208 EATPRGILKVP----------AFLDEKPKENVRKEWKRVN---KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQI 274 (416) Q Consensus 208 ~~~~~~v~~~~----------~~~~~e~~~~~~~~~~~~~---~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I 274 (416) |++|+++++++ +.+++++.+++++.|++.. ++++++|+++|++|++++++++|+|++|++++++++| T Consensus 301 Ga~PsGILsvkg~~~~d~k~~~~LseEq~erlKe~wee~~sG~NnG~piVLdeGmef~pLs~s~~DaQfLEsrkfs~eeI 380 (945) T protein:vir:10 301 GSIPEGILAIEPPSYKEGDIYPQLSREQLESIQRQLQAIMMGDYTQVPILSGGKFTWIDFKGKRRDMQFKELAEFVARKI 380 (945) T ss_pred CCccceEEEecCccccccccccccCHHHHHHHHHHHHHHhCCcccccceecCCCceEEEccCChhHHHHHHHHHHHHHHH Confidence 88999999764 5679999999999999875 3467889999999999999999999999999999999 Q ss_pred HHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHH Q lcl|Aclame:pro 275 SMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYL 354 (416) Q Consensus 275 a~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~ 354 (416) |++|||||.+||..+++++++.|++...|+++||+|++.+||++||++|+...+ +..++|+++.+...|.+++++++ T Consensus 381 ArAFGVPP~lLG~~e~st~SNiEqq~~~Fv~~tL~Pil~~IEqeLNrkLl~~~e---g~~i~fdFd~ldl~D~ksraEal 457 (945) T protein:vir:10 381 CAVYQVSPQDVGILEGSNKATAEVMASLTKAKGLEPLMATISKGFDEVVSEFRN---EKDIKLWFKEDDLEKERDWWNII 457 (945) T ss_pred HHHhCCCHHHcccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---CceeEEEecchhccCHHHHHHHH Confidence 999999999999999999999999999999999999999999999998875432 34456666666678899999999 Q ss_pred HHHHhCCCcCHHHHHHHhCCCCCCCCCeEeecc-Ccccccccccccc----------ccCCcccCCCCccCCC Q lcl|Aclame:pro 355 KTLHETGVLNKDEIRELLERNPIENGDKYISSL-NYVFLDFLEEYQR----------LKAGGAMKGGDNKNEG 416 (416) Q Consensus 355 ~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~-n~~~~~~~~~~~~----------~~~~~~~~gge~~~~~ 416 (416) .+++++|+||+||+|+++|+||+||||+++++. |+.|.+.....++ ....+..+||+.++++ T Consensus 458 ~kli~sGiLTiNEvRe~lGLpPIeGGD~lli~~nn~~P~d~~~ka~~ga~p~q~aq~~~dqp~~kGGe~dEns 530 (945) T protein:vir:10 458 QGQLNTGFRSINEARMEKGLEPVPWGDVPFSGLRNWKPEDEQAKAQQGAMPPQLAQAMADQPSQQGGGVDENS 530 (945) T ss_pred HHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccccCCCCcccccCCCCCCCCCCCCCCCCC Confidence 999999999999999999999999999999987 5667665433211 0111233455545444 No 47 >protein:vir:960 Length: 413 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:19 # MgeName: bIL285 # Cross-refs: genbank:acc:NP_076614;genbank:gi:13095722;genbank:GeneID:920279 Probab=100.00 E-value=1.9e-85 Score=485.01 Aligned_cols=388 Identities=16% Similarity=0.203 Sum_probs=315.6 Q ss_pred Ccchhhhccccccccc-----cccchhHHHhhhcCccccccccc-cHHHHhccHHHHHHHHHHHHhhccCcceEEeecCC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDH-----EDGFNNILLNMFGGRKTASGERV-SESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDG 74 (416) Q Consensus 1 m~~~~~f~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 74 (416) |.+ ++|+++...... ......... +........... ....++++++|++||++||+++|++||++++.+++ T Consensus 11 ~~m-~~F~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~cI~~ia~~ia~~~~~~~~~~~~ 87 (413) T protein:vir:96 11 KNL-KFFNNKRSPTEESKAKDEIPKAPQVV--MTLPNFFKELISDGYTKLSDSPEVRMAVDCIADLVSNMTIQLMQNGET 87 (413) T ss_pred hcC-CccccCCCcchhhhhhcccccccccc--ccchhhHhhhccchhHHHhhchHHHHHHHHHHHhhccCceEEEEecCC Confidence 222 244433211110 000000000 000000000001 12346789999999999999999999999998776 Q ss_pred cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCC-cEEEEEeeccceEEEEEcCCCcEEEEEE Q lcl|Aclame:pro 75 GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHG-YPEALFPLRPDYTNAYVHPTTGMLWYQT 153 (416) Q Consensus 75 ~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g-~~~~l~~l~p~~v~~~~~~~~~~~~~~~ 153 (416) +. +..+|+++++|+.+||++||+++||+.++.+++++||||+++.|+..| .+.+|||++|++|++..+.+ .+.|.+ T Consensus 88 ~~-~~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~r~~~g~~~~~L~~l~~~~v~~~~~~~--~~~y~~ 164 (413) T protein:vir:96 88 GD-KRIKNDLSRVVDIEPNKYLSRKTFIQWLVRSMLLEGNGNAVVKPQVSGDKIIGLTPISPYKVTFNVSDD--DLDYSI 164 (413) T ss_pred Cc-cccccHHHHHHHhccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCceEEEEEecCceeEEEEcCC--eEEEEE Confidence 55 446899999999999999999999999999999999999999999887 57899999999999987653 344445 Q ss_pred eeCCeeEEechhheeeecc-CCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHH Q lcl|Aclame:pro 154 VLNGKAIELYDYEVLHFKG-LST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRK 231 (416) Q Consensus 154 ~~~~~~~~~~~~~vih~~~-~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~ 231 (416) ...+ .++++++|||+++ ++. ++++|+||+.++..++....++.++..++|+||++|+++++.++.+++++.+++++ T Consensus 165 ~~~~--~~~~~~evih~k~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~~~~~~ 242 (413) T protein:vir:96 165 TFDN--KEYDPSTLLHFVLNPSIERPFIGTGYKVALKDIVGNLKQASVTKKGFMASEYMPNLIVSVDSDSDELSDEEGRE 242 (413) T ss_pred eecC--cEEchhhEEEEeccCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHHHH Confidence 4443 4688999999995 344 57899999999999999999999999999999999999999999999999999999 Q ss_pred HHHHhh----cCCceeecCCCc-eeEec-cCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHH Q lcl|Aclame:pro 232 EWKRVN----KVENIAIIDYGL-EYQSI-SMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVR 305 (416) Q Consensus 232 ~~~~~~----~~~~~~vl~~g~-~~~~~-~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~ 305 (416) .|++.+ ++|+++|+++|. ++.++ .++++|++++|.+++++++||++|||||.+||.. ++.+++..+|++ T Consensus 243 ~~~~~~~g~~n~g~~~vl~~~~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~-----~~~~~~~~~~~~ 317 (413) T protein:vir:96 243 NFEEMYLKRKEAGKPWIIPEGMVNVQQIKPLTLNDLAINDAVTLDKKTVAGIFGVPAFLLGVG-----TYNKDEFNNFIN 317 (413) T ss_pred HHHHHhcCccccCceeeecCCcccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCC-----cchHHHHHHHHH Confidence 998764 567889987665 45555 4689999999999999999999999999999753 234788899999 Q ss_pred HHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEee Q lcl|Aclame:pro 306 NTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYIS 385 (416) Q Consensus 306 ~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~ 385 (416) +||.|++++|+++||++|+++ +.+++||++++++.|.+++++++.+++++|+||+||+|+++|+||+||||++++ T Consensus 318 ~~l~P~~~~ie~~ln~~ll~~-----~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~p~~~gd~~~~ 392 (413) T protein:vir:96 318 TKIMSIAQVIQQTYNKLIVEE-----DMYFSLNPRSLYNYSLTEMVSAGAQMTQLNALRRNEFRNWVGMPPDAEMDDLLV 392 (413) T ss_pred HHHHHHHHHHHHHHHHhhCCC-----CcEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeee Confidence 999999999999999999864 578999999999999999999999999999999999999999999999999999 Q ss_pred ccCccccccccccccccCCcccCCCCc Q lcl|Aclame:pro 386 SLNYVFLDFLEEYQRLKAGGAMKGGDN 412 (416) Q Consensus 386 ~~n~~~~~~~~~~~~~~~~~~~~gge~ 412 (416) |+|++|++..++.+..+ +||+ T Consensus 393 ~~n~~~~~~~~~~~~~~------~~dt 413 (413) T protein:vir:96 393 LENYLQQKDLVNQKKLI------QDET 413 (413) T ss_pred cccccchhhcccccCCC------CCCC Confidence 99999999887766544 4444 No 48 >protein:vir:8100 Length: 466 # NCBI annotation: gp4 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817681;genbank:gi:29566112;genbank:GeneID:1259306 Probab=100.00 E-value=3.1e-84 Score=478.42 Aligned_cols=407 Identities=16% Similarity=0.121 Sum_probs=328.2 Q ss_pred Ccchhhhcccccccc------cc--------------c-cchhHHHhhhcCcc----ccccccccHHHHhccHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSD------HE--------------D-GFNNILLNMFGGRK----TASGERVSESNSLVQPDIFACVN 55 (416) Q Consensus 1 m~~~~~f~~~~~~~~------~~--------------~-~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~v~~~i~ 55 (416) |.|...+..+..... .. . .....+...+++.. +.++..|+.+.|+++++|++||+ T Consensus 1 M~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~~~a~~~~~v~~~i~ 80 (466) T protein:vir:81 1 MRLIDRLLSTRGAAPRMSIDDYAQMLNEFAFNGIGYGFGGGVPRIQQTLAGPSTELAPDTFVGLATQAYQANGPVFACML 80 (466) T ss_pred CchhHHHhhccCcccccchhhhhhhhhhhhccccccccccccHHHHHhhccccccccCccccccchhhhhccHHHHHHHH Confidence 866655554432221 00 0 01122333333322 23577899999999999999999 Q ss_pred HHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC--------CcE Q lcl|Aclame:pro 56 VLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH--------GYP 127 (416) Q Consensus 56 ~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~--------g~~ 127 (416) +||+.||++||++++.+++++.+..+|+ ++.|+.+||++||+++||+.++.+++++||||++|.|+.. |.+ T Consensus 81 ~Ia~~ia~lp~~~~~~~~~~~~~~~~~~-~~~L~~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~g~l~~~~~g~~ 159 (466) T protein:vir:81 81 VRQLVFSSVRFRWQRLRDGKPSDTFGSR-DLQILETPWKGGTTQDMLSRMIQDADLAGNSYWTIVDGEFVRMRPDWVDVV 159 (466) T ss_pred HHHHhhccCceEEEEecCCceeeccccH-HHHHhhCCCCCCCHHHHHHHHHHHHHhcCCeEEEEEecCccccccccCcce Confidence 9999999999999998766665554554 5557789999999999999999999999999999999765 558 Q ss_pred EEEEeeccceEEEEEcCCCcE-EEEEEeeCC-----eeEEechhheeeeccC--CCCccccccHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 128 EALFPLRPDYTNAYVHPTTGM-LWYQTVLNG-----KAIELYDYEVLHFKGL--STDGIHGKSPIGVVREHIGAQAAATK 199 (416) Q Consensus 128 ~~l~~l~p~~v~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~vih~~~~--~~~~~~G~s~~~~~~~~i~~~~~~~~ 199 (416) .+|+|++|+.|++..+.++.. ..|.+...+ ....+++++|||||++ +.++++|+||+..+.+++....++++ T Consensus 160 ~~l~~l~~~~v~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~dviHir~~~~~~d~~~G~s~i~~~~~~i~~~~a~~~ 239 (466) T protein:vir:81 160 VEERMVRGGRGELGGGQLGWRKVGYLYTEGGRQSGNESVGFLAEDVVHFAPIPDPLASYRGMSWLTPILREIRADQAMSK 239 (466) T ss_pred eEEEEecCcceEEEEcCCCceEEEEEEEecCcccccceeeeccccEEEEcCCCCcccccccccHHHHHHHHHHHHHHHHH Confidence 999999999999999887754 344444332 3567999999999965 45789999999999999999999999 Q ss_pred HHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhh----cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 200 YNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVN----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQIS 275 (416) Q Consensus 200 ~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia 275 (416) +..++|+||++|+++++.++.+++++.+++++.|++.+ |+|+++||++|++|++++++++|+|++|.+++++++|| T Consensus 240 ~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia 319 (466) T protein:vir:81 240 HQAKFFDNGATVNLVIKHNPMADPAAVKKWADEVNSKHAGVDNAWKNLNLYPGADADVVGSNLQEIDFKNVRGGGETRIA 319 (466) T ss_pred HHHHHHhcCCCcceEEecCCCCCHHHHHHHHHHHHHHhcCccccccceEcCCCceEEEccCChhHHHHHHHHHHHHHHHH Confidence 99999999999999999999999999999999998764 56789999999999999999999999999999999999 Q ss_pred HHhccchhhccccc---CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHH Q lcl|Aclame:pro 276 MIYKVPLHKLNELD---KATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAE 352 (416) Q Consensus 276 ~~~gvp~~~lg~~~---~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~ 352 (416) ++|||||.+||..+ .+||+|.|++.+.|+++||.|++++||++|+++|++..+.. .++++||.+++++.|.+++++ T Consensus 320 ~~fgVPp~~lG~~~~~~~st~sn~eq~~~~f~~~tl~P~~~~ie~~l~~~L~~~~~~~-~~~~~f~~~~llr~d~~~r~~ 398 (466) T protein:vir:81 320 AAAGVPPVIVGLSEGLAAATYSNYGQARRRLADGTAHPLWQNLSGCIGHVMPDMGPDV-RLWYDADDVPFLREDEKDAAD 398 (466) T ss_pred HHhCCCHHHcccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccCc-ceEEEecchhhhccCHHHHHH Confidence 99999999999764 46899999999999999999999999999999999876543 578999999999999998876 Q ss_pred H-------HHHHHhCCCcCHHHHHHHhCCCCCCCCCeE-eeccCccccccccccccc---cCCcccCCCCccCC Q lcl|Aclame:pro 353 Y-------LKTLHETGVLNKDEIRELLERNPIENGDKY-ISSLNYVFLDFLEEYQRL---KAGGAMKGGDNKNE 415 (416) Q Consensus 353 ~-------~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~-~~~~n~~~~~~~~~~~~~---~~~~~~~gge~~~~ 415 (416) + +..++++|+ |+||+|+ ++++||.. +.+.++.+++.....+.. ...++.+|||++++ T Consensus 399 ~~~~~~~~~~~~~~~g~-t~nE~r~-----~~~~gd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gg~~ngn 466 (466) T protein:vir:81 399 IQKVRAETINTLITAGY-EPESVVA-----AVNSGDLRLLKHTGLTSVQLLPPGVSASASSDTPTSGGADDNGN 466 (466) T ss_pred HHHHHHHHHHHHHHcCC-Chhhccc-----cccCCccccccCCCcchhhhcccccccccCCCCcccCCCCcCCC Confidence 5 566788885 9999995 45678765 445566665543322221 11234566666655 No 49 >protein:vir:94666 Length: 723 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1527 # MgeName: mu1/6 # Cross-refs: genbank:acc:YP_579205;genbank:gi:93007441;genbank:GeneID:5076785 Probab=100.00 E-value=3.2e-84 Score=478.35 Aligned_cols=391 Identities=16% Similarity=0.200 Sum_probs=309.5 Q ss_pred ccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhhccc Q lcl|Aclame:pro 12 GSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYAR 91 (416) Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 91 (416) -++.+... + ............++.+.++++++|++||++||+++|++||++++.++. ...+|+++++|+.+ T Consensus 1 ~~~~~~~~-g-----~~~~~~~~~~~~~~~~~~~~~~~V~acV~~Ia~~iA~lpl~l~~~~~~---~~~~~~l~~lL~~~ 71 (723) T protein:vir:94 1 MTTFPSGA-G-----GWNAWSADSVFGNGAKGWSNSAVAYRCISMLANNAASVDLVVRGPDGE---LDELHPLSQLWNVM 71 (723) T ss_pred CcccccCC-C-----ccccccccccccccHHHHhhhHHHHHHHHHHHHhhccceeEEEcCCCc---cchhhHHHHHHhhC Confidence 11111110 0 000111223455677889999999999999999999999999875322 33579999999999 Q ss_pred cccccCHHHHHHHHHHHHHHcCCeEEEEeec---CCCcEEEEEeeccceEEEEEcCCCcE------EEEEEe-eCCeeEE Q lcl|Aclame:pro 92 PNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG---SHGYPEALFPLRPDYTNAYVHPTTGM------LWYQTV-LNGKAIE 161 (416) Q Consensus 92 PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~---~~g~~~~l~~l~p~~v~~~~~~~~~~------~~~~~~-~~~~~~~ 161 (416) ||++||+++||+.++.+++++||+|+++.|+ ..|.|.+|+|++|..+.+....++.. ..|.+. .++..+. T Consensus 72 PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~r~~~g~p~~l~~l~~~~~~v~~~~~~~~~~~~~~~~y~~~~~~G~~~~ 151 (723) T protein:vir:94 72 PNRAMPAQVLKALSMTRLQLDGQCHLWLNYNGRTPAGVPDEIWYVYDRVTTIVATRAADAVPQAQIIGYVIERTDGVRVP 151 (723) T ss_pred CCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCccccceeEEEEecCcceEEeecCCCccceeeeeeEEEEEecCceeEE Confidence 9999999999999999999999999999865 45899999999998888776655432 223333 4556678 Q ss_pred echhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHh---- Q lcl|Aclame:pro 162 LYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRV---- 236 (416) Q Consensus 162 ~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~---- 236 (416) +++++|||+|+++ .++++|+||+..++.++....++++++.++|+||++|+++++.+ .+++++.+++++.|++. T Consensus 152 ~~~~dIiHir~~~~~dg~~G~Spi~~a~~~i~~~~aa~~~~~~~f~NG~~p~giL~~~-~l~~e~~~~~~~~~~~~~~G~ 230 (723) T protein:vir:94 152 VLADEMLWLRFSDPYDPLAVMAPWKAARAAVDADFYAATWQRQSFKNGARPGGVVNLG-DMDEQTFTKTVAAFRSQVEGV 230 (723) T ss_pred ecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcC-CCCHHHHHHHHHHHHHHhhch Confidence 9999999999875 68999999999999999999999999999999999999999986 58999999999988765 Q ss_pred hcCCceeecC----------CCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHH Q lcl|Aclame:pro 237 NKVENIAIID----------YGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRN 306 (416) Q Consensus 237 ~~~~~~~vl~----------~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~ 306 (416) .|+|+++||+ +|++|++++++++|+|++|.+++++++||++|||||.+|+. .++++|.+++...|+++ T Consensus 231 ~Nagk~~vL~g~~~~~~vl~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~i~~--~st~sN~e~~~~~f~~~ 308 (723) T protein:vir:94 231 QNAGRHLLIAGQGSDGGAAGKGATFTSLSMSPAEMDYINSRMHSAEEVMLAFGIRKDALLG--GSTYENQAEAKAAVWTE 308 (723) T ss_pred hhcCcceeecccccccccccCCceEEEccCCHHHHHHHHHHHHhHHHHHHHhCCChhHcCC--CCCcccHHHHHHHHHHH Confidence 4678888874 69999999999999999999999999999999999999864 46889999999999999 Q ss_pred HHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC--eEe Q lcl|Aclame:pro 307 TLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD--KYI 384 (416) Q Consensus 307 ~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd--~~~ 384 (416) ||.|+++.||++||++|++..+. ..+++||...+++.|.+++++++.+++++|+||+||+|+++||||+|||| .++ T Consensus 309 tL~P~~~~ie~~ln~~Ll~~~g~--~~~~~f~~~~lLr~D~~~r~~~~~~~v~~G~~T~NE~R~~lglpPi~gGd~~~~~ 386 (723) T protein:vir:94 309 TLIPQMEVMASITDLQLLPDIGW--TVEWDFNSVPALQEDLEAQAGRNQGYLVNDVLMVDEVRATIGLDPLPGGIGQMTL 386 (723) T ss_pred HHHHHHHHHHHHHhHhhcccccC--ceEEeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCccccee Confidence 99999999999999999976433 45678888889999999999999999999999999999999999999987 445 Q ss_pred ecc--Ccccccccccccccc-----------CCc------ccC--------CC-CccCCC Q lcl|Aclame:pro 385 SSL--NYVFLDFLEEYQRLK-----------AGG------AMK--------GG-DNKNEG 416 (416) Q Consensus 385 ~~~--n~~~~~~~~~~~~~~-----------~~~------~~~--------gg-e~~~~~ 416 (416) +|. ++.|.+.+....+.. .++ ..+ .| +.+.+. T Consensus 387 ~p~~~~~a~~~~~~p~~~e~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 446 (723) T protein:vir:94 387 TPYRAQFAPAPAPAPAVEEGAARMLALLERVAADRPLPELPVRATTVLHHDPGPDPQQTL 446 (723) T ss_pred ccccccccCCCCCCccchhhhHhhhhhccccccccCcCCCCCCCCCCCCCCcccCCchhH Confidence 654 343433222110000 000 000 00 000000 No 50 >protein:vir:8317 Length: 409 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:154 # MgeName: Corndog # Cross-refs: genbank:acc:NP_817885;genbank:gi:29566318;genbank:GeneID:1259513 Probab=100.00 E-value=2.2e-84 Score=479.27 Aligned_cols=370 Identities=19% Similarity=0.202 Sum_probs=309.5 Q ss_pred Ccchhhhcc-------------------------ccccccccccchhHH--Hh---hhcCccccccccccHHHHhccHHH Q lcl|Aclame:pro 1 MLLERMFEK-------------------------RSGSSDHEDGFNNIL--LN---MFGGRKTASGERVSESNSLVQPDI 50 (416) Q Consensus 1 m~~~~~f~~-------------------------~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~a~~~~~v 50 (416) =||+++|+- +.............. .. .+....+.++..++.+.++++++| T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~t~~~~~~~~~v 81 (409) T protein:vir:83 2 GFWSNLFGIPSIPDLPNDNGPVDYNPGDPDMVEFRGPEEEPEARALPWIRPTAWSGYPESWATPSWGSAQDKLRTLIDVA 81 (409) T ss_pred chhhhhcccccCCCcccccccccccCCCCceeeccCCCcchhhhhcccccccccccccccccccCccccchhhHhhhHHH Confidence 255677773 111111111111110 00 111122446778899999999999 Q ss_pred HHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEE-eecCCCcEEE Q lcl|Aclame:pro 51 FACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYI-QFGSHGYPEA 129 (416) Q Consensus 51 ~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i-~r~~~g~~~~ 129 (416) ++||++||+++|++|+++++.+. ..+.+.++|+.+||++||+.+||+.++.++++ ||+|+++ .|+..|+|++ T Consensus 82 ~acV~~Ia~~iA~lpl~~~~~~~------~~~~~~~ll~~~PN~~~t~~~f~~~l~~~lll-Gnay~~~i~r~~~G~~~~ 154 (409) T protein:vir:83 82 WACIDLNASVLSSMPIYRMRNGR------IIDSVAWMSNPDPEVYTSWQEFAKQLFWDFQL-GEAFVLPMAHGSDGYPIR 154 (409) T ss_pred HHHHHHHHHhhccCceEEeeCCc------cccchhhhcccCCCCCCCHHHHHHHHHHHHhh-CCcEEEEEEECCCCcEEE Confidence 99999999999999999997432 22455678999999999999999999999887 9999985 5889999999 Q ss_pred EEeeccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 130 LFPLRPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNE 208 (416) Q Consensus 130 l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~ 208 (416) |+||+|+.|++..+.++. ++|++.. ....++|||+|+++ .++++|+||+..++.++....+++++..++|+|| T Consensus 155 L~pl~p~~v~v~~~~~g~-~~y~~~~-----~~~~~eiiHir~~~~~~~~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng 228 (409) T protein:vir:83 155 FRVVPPWLVNVELKKGAR-REYRIGG-----LNVTDEILHIRYQGNTADAHGHGPLESAAPRQVVIGLLQKYVQNLAETG 228 (409) T ss_pred EEEECCcceEEEEcCCce-EEEEEcc-----ccCccceEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcC Confidence 999999999998887654 4444432 23458999999875 4678999999999999999999999999999999 Q ss_pred CCcceeeccCCcCCHHHHHHHHHHHHHhh--cCCceeecCCCceeE-eccCChhhHHHHHHHHHHHHHHHHHhccchhhc Q lcl|Aclame:pro 209 ATPRGILKVPAFLDEKPKENVRKEWKRVN--KVENIAIIDYGLEYQ-SISMPLQEAQFVESMKFNKAQISMIYKVPLHKL 285 (416) Q Consensus 209 ~~~~~v~~~~~~~~~e~~~~~~~~~~~~~--~~~~~~vl~~g~~~~-~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~l 285 (416) ++|+++++.++.+++++.+++++.|+..+ ++|+++++.+|+++. +++++++|+|++|.+++++++||++|||||.+| T Consensus 229 a~p~gil~~~~~ls~e~~~~~~~~~~~~~~~nag~~~il~~g~~~~~~~~~s~~d~q~le~r~~~~~eIa~~fgVPp~ll 308 (409) T protein:vir:83 229 GVPLYWLGVERRLSETEAVDLMDRWIESRSKYAGHPALVTGGATLNQAKSMSAQDLSLMELTQFNEARIAILLGVPPFLV 308 (409) T ss_pred CCcceEeecCCCCCHHHHHHHHHHHHHhhCCccCccceecCCcccccccCCCHHHHHHHHHHHhhHHHHHHHhCCCHHHc Confidence 99999999999999999999999998765 678889999999875 689999999999999999999999999999999 Q ss_pred ccccC---CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCC Q lcl|Aclame:pro 286 NELDK---ATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGV 362 (416) Q Consensus 286 g~~~~---~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~ 362 (416) |..++ .||+|.|++...|+++||.|++++||++||++|+++ +.+++||++.+++.|.+++++++++++++|+ T Consensus 309 g~~~~~~~~tysn~eq~~~~f~~~tL~P~~~~ie~~l~~~Ll~~-----~~~~~f~~~~llr~d~~~r~~~~~~~~~~G~ 383 (409) T protein:vir:83 309 GLPGATGSLTYSNIEQLFSFHDRSSLRPKATAVMAALDRWALPS-----PQHLELNRDDYTRPSLVERATAYKIMIEAGV 383 (409) T ss_pred cCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-----CcEEEeehhhhhccCHHHHHHHHHHHHhCCC Confidence 97544 478999999999999999999999999999999975 3579999999999999999999999999999 Q ss_pred cCHHHHHHHhCCCCCCCCCeEeeccCc Q lcl|Aclame:pro 363 LNKDEIRELLERNPIENGDKYISSLNY 389 (416) Q Consensus 363 ~t~NE~R~~~gl~p~~ggd~~~~~~n~ 389 (416) ||+||+|+++||||++|||++-- .++ T Consensus 384 lT~NE~R~~~glpp~~ggd~l~~-~gv 409 (409) T protein:vir:83 384 MEPNEARAMERLHSEAAAVRLSG-GGV 409 (409) T ss_pred cCHHHHHHHhCCCCCCCCcccCC-CCC Confidence 99999999999999999999831 122 No 51 >protein:vir:3843 Length: 397 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:322 # MgeName: phi adh # Cross-refs: genbank:acc:NP_050149;swissprot:trembl:q9t1f8;genbank:gi:9633041;uniprot:Q9T1F8;genbank:GeneID:1262206 Probab=100.00 E-value=2.7e-82 Score=467.79 Aligned_cols=385 Identities=19% Similarity=0.243 Sum_probs=318.1 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.|.+..+++..... ..+..+...+.+ +.++..++.+.|+++++|++||++||++||++||++ T Consensus 1 M~~f~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~v~~~~al~~~~V~~~v~~ia~~ia~~p~~~------------ 63 (397) T protein:vir:38 1 MPLLKLNKSHSQGFS---LNDPDWVNFLTG--GEAQKYVSADTALKNSDIFSLIMQLSGDLAMVRYTS------------ 63 (397) T ss_pred CcchhhhhcccCccc---CCchhhhhhhcC--CcCCceechHHhhccHHHHHHHHHHHHHHhhCcccc------------ Confidence 988776443322111 112234444443 345777899999999999999999999999999964 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEee----C Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVL----N 156 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~----~ 156 (416) +|+.+++|+.+||++||+++||+.++.+++++||||+++.|+..|++++|+|++|++|++..+.+++..+|.+.. . T Consensus 64 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~l~~l~~~~v~i~~~~~~~~~~y~~~~~~~~~ 143 (397) T protein:vir:38 64 ESDRSQSIISNPSVTANGYSFWQGMFAQLLLDGNCYAYRHKNTNGVDLSWEYLRPSQVQPMLLQDGSGLIYNINFDEPAI 143 (397) T ss_pred cccHHHHHHhcCCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEeccccc Confidence 356788999999999999999999999999999999999999999999999999999999999888877776653 3 Q ss_pred CeeEEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHH Q lcl|Aclame:pro 157 GKAIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKR 235 (416) Q Consensus 157 ~~~~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~ 235 (416) +..+.+++++|||+++++.++ ++|+||+..+..++....++.+++.++|+||++|+++++.++.+++++.+++++.|+. T Consensus 144 ~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~e~~~~~~~~~~~ 223 (397) T protein:vir:38 144 GYMENVPAADVIHIRLLSKNGGKTGISPLSALINEQQIKDASNELTLKALKQSVTASAVLTIQKGGLLDAETRIARSKEI 223 (397) T ss_pred cceeEecCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHHHHHHHH Confidence 345789999999999988766 6899999999999999999999999999999999999999999999999999999876 Q ss_pred hh---cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 236 VN---KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWI 312 (416) Q Consensus 236 ~~---~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~ 312 (416) .. ++++++|+++|++|++++.+++|+++.|.+++.+++||++|||||.+||+.+++ +++.|+ ...|+.+||.|++ T Consensus 224 ~~~~~n~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~afgVp~~~lg~~~~~-~~~~e~-~~~~~~~~l~P~~ 301 (397) T protein:vir:38 224 SKQIHNSDGPVVIDALEDYKPLEVKGNIASLLNQVDWTRDQIAKVYGVPDSYLNGQGDQ-QSSITQ-ISGQYAKSLNRYV 301 (397) T ss_pred HhcccccCCceecCCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCc-ccHHHH-HHHHHHHHHHHHH Confidence 53 567899999999999999999999999999999999999999999999987654 466664 4678999999999 Q ss_pred HHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccc Q lcl|Aclame:pro 313 VNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFL 392 (416) Q Consensus 313 ~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~ 392 (416) ..|+++||++|+++. +|++..+++.|.+++++.+++++++|+||+||+|+++|+||+++||.+.......+. T Consensus 302 ~~ie~~ln~~l~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~G~~t~nE~R~~lg~~p~~~~d~~~~~~~~~~~ 373 (397) T protein:vir:38 302 QAIVGELNDKLHANI--------SANIRFAIDAMGDQYASTISSSVKGGTIAGNQARFILQNSGYLAKDLPDPEKEPQQA 373 (397) T ss_pred HHHHHHHHHhccChh--------cccccccccCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCcccccccccccc Confidence 999999999999753 344555678899999999999999999999999999999999999976655443332 Q ss_pred ccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 393 DFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 393 ~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ..... .+++..++.+.++++ T Consensus 374 ~~~~~----~~~g~~~~~~~~e~~ 393 (397) T protein:vir:38 374 IQLIQ----QEGGENDGNNSDERG 393 (397) T ss_pred ccccc----cccCCCCCCCCCCCC Confidence 22211 111112222222222 No 52 >protein:vir:6210 Length: 394 # NCBI annotation: Portal protein # Family: family:all:10882 # MgeID: mge:128 # MgeName: phBC6A52 # Cross-refs: genbank:acc:NP_852590;genbank:gi:31415850;genbank:GeneID:1489208 Probab=100.00 E-value=6.7e-83 Score=471.09 Aligned_cols=384 Identities=17% Similarity=0.234 Sum_probs=313.2 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.|..+|+++........ ..+.+.+++..+.+++.++.+.++++++|++||++||+++|++||++++.+++ +.. T Consensus 1 MGl~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~vt~~~al~~~~v~~~i~~Ia~~iA~lp~~v~~~~g~---~~~ 74 (394) T protein:vir:62 1 MGLRDRFSNYLFKKAEKR---GYLDNVLGKSIRYSGVYVTDSNILQSSDVYELLQDISNQMVLADIVVEDEFGN---EIK 74 (394) T ss_pred CchhhhhhhhccCCCCch---hhhhhhhhcccccCccccChhhhhccHHHHHHHHHHHHhhcccceEEEcCCCc---ccc Confidence 998888875543222222 23455667777788888999999999999999999999999999999975432 344 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCeeE Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKAI 160 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~ 160 (416) +|+++ .|+.+||++||+++||+.++.+++++||+|+++.++..+ + +..+.+..++.+.. .+.. ..+ T Consensus 75 ~~~~~-~Ll~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~~~~----~----~~~~~~~~~~~~~~---~~~~--~~~ 140 (394) T protein:vir:62 75 DDIAL-QILRNPNNYLTQSEFIKLMTNTYLLEGETFPILNGAQIH----L----ASNVFTELDDNLVE---HFNI--GGH 140 (394) T ss_pred hhhHH-HHhccCCCCCCHHHHHHHHHHHHHhcCCeEEEEecceee----c----cccceEEECCceEE---EEee--CCE Confidence 56655 566899999999999999999999999999999755433 2 23455555544332 2222 346 Q ss_pred EechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCC--HHHHHHHHHHHHHh-- Q lcl|Aclame:pro 161 ELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLD--EKPKENVRKEWKRV-- 236 (416) Q Consensus 161 ~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~--~e~~~~~~~~~~~~-- 236 (416) +|++++|+|+|+++.++++|+||+..+..++....++.+++.++|+||++|+++++.++..+ +++.+++++.|++. T Consensus 141 ~~~~~eiih~r~~~~d~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (394) T protein:vir:62 141 EIPPCMIRHVKNIGADHLRGKGILDLGRDTLEGVMSAEKTLTDKYKKGGLLTFLLNLDAHINPQNGAQSKLINAILDQLE 220 (394) T ss_pred EechhheEEecCcCCCCccccChHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCcCHHHHHHHHHHHHHHhc Confidence 89999999999999999999999999999999999999999999999999999999988775 44567777777654 Q ss_pred --hcCCceeecCCCc--eeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 237 --NKVENIAIIDYGL--EYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWI 312 (416) Q Consensus 237 --~~~~~~~vl~~g~--~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~ 312 (416) .++|+++|++.|. ++++++.+++|+|++|.+++++++||++|||||.+||.. +++|.|++.+.|+++||.|++ T Consensus 221 g~~n~g~~~vl~~g~~~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~---~~sn~e~~~~~~~~~~l~P~~ 297 (394) T protein:vir:62 221 SIDEARSVKMIPLGKGYSIDTLKSPLDDEKTLAYLNVYKKDLGKFLGINVDTYTEL---IKEDIEKAMMYIHNKAVRPIM 297 (394) T ss_pred cccccCceeEeeCCCceeEEecCCCcchHHHHHHHHHHHHHHHHHhCCCHHHcCCC---CCcCHHHHHHHHHHHHHHHHH Confidence 4668899987766 666888899999999999999999999999999999853 568999999999999999999 Q ss_pred HHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCeEeeccCcc Q lcl|Aclame:pro 313 VNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPI--ENGDKYISSLNYV 390 (416) Q Consensus 313 ~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~--~ggd~~~~~~n~~ 390 (416) ++||++|+++||++.+. .+.+++||...++. ..++++++.+++++|+||+||+|+++|+||+ |+||++++++|++ T Consensus 298 ~~ie~~l~~kll~~~~~-~~~~~~fd~~~~~~--~~~~~~~~~~~~~~g~~T~NE~R~~~gl~p~~~~~gd~~~~~~n~~ 374 (394) T protein:vir:62 298 KNFEDHLSLLFYAQNSG-KRIKFKINILDFVT--YSNKTNIGYNLVRTAITSPDNVADMLGFPKQNTKESQAIYISNDVT 374 (394) T ss_pred HHHHHHHhhhhcCcccc-CceEEEechhhhcC--HHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeecccccc Confidence 99999999999987664 35677777777655 4567888999999999999999999999998 6899999999999 Q ss_pred ccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 391 FLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 391 ~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) |++.....+ +..+|||+++. T Consensus 375 ~~~~~~~~~-----~~~kgge~~en 394 (394) T protein:vir:62 375 EIGKKEATD-----GSLGGGEENEN 394 (394) T ss_pred ccccccccc-----ccCCCCCCCCC Confidence 987654322 34567776555 No 53 >protein:vir:104259 Length: 403 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1504 # MgeName: T5 # Cross-refs: genbank:acc:YP_006980;genbank:gi:46401881;genbank:GeneID:2777676 Probab=100.00 E-value=5.1e-82 Score=466.28 Aligned_cols=386 Identities=17% Similarity=0.200 Sum_probs=311.4 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCC--ccee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDG--GIER 78 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~--~~~~ 78 (416) |.|..|+..+-....+... .+.. .+ ..+......+.+.++++++|++||++||+.+|++||++++.... +... T Consensus 1 mg~~~~~~~~~~~~~~~~~---~~~~-~~-~~~~~~~~~t~~~~~~~~~v~~cv~~Ia~~ia~~p~~v~~~~~~~~~~~~ 75 (403) T protein:vir:10 1 MGFKSWITEKLNPGQRIIR---DMEP-VS-HRTNRKPFTTGQAYSKIEILNRTANMVIDSAAECSYTVGDKYNIVTYANG 75 (403) T ss_pred Ccchhhhhhccchhhhhhh---cccc-cc-cccCCcccccHHHHHHHHHHHHHHHHHHHHHhhCceeEeecccccccccc Confidence 9999988744221111100 0000 01 11222233466888999999999999999999999999976542 2334 Q ss_pred eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCe Q lcl|Aclame:pro 79 KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGK 158 (416) Q Consensus 79 ~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 158 (416) ..+|+++++|+.+||++||+++||+.++.+++++||||+++.+ ..+++++++.+++..+.++....+ +. +. T Consensus 76 ~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gnayi~~~~------~~l~~l~~~~~~v~~~~~~~~~~~-~~--~~ 146 (403) T protein:vir:10 76 VKTKTLDTLLNVRPNPFMDISTFRRLVVTDLLFEGCAYIYWDG------TSLYHVPAALMQVEADANKFIKKF-IF--NN 146 (403) T ss_pred cccchHHHHHhhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEeC------ceeEeecCcceEEEEcCCceEEEE-Ee--cC Confidence 5678999999999999999999999999999999999998743 368999999999988765544333 22 23 Q ss_pred eEEechhheeeeccCC-----CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 159 AIELYDYEVLHFKGLS-----TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEW 233 (416) Q Consensus 159 ~~~~~~~~vih~~~~~-----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~ 233 (416) ...+++++|+|++..+ .++++|+||+..+..+++...++.++..++|+||++|+++++.++.+++++.+++++.| T Consensus 147 ~~~~~~~eiih~~~~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~~~~~~~~ 226 (403) T protein:vir:10 147 QINYRVDEIIFIKDNSYVCGTNSQISGQSRVATVIDSLEKRSKMLNFKEKFLDNGTVIGLILETDEILNKKLRERKQEEL 226 (403) T ss_pred ceeecccceEEecccccccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHH Confidence 4568889999999654 37889999999999999999999999999999999999999999999999999999999 Q ss_pred HHhh----cCCceeecCCCceeEeccC--ChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHH Q lcl|Aclame:pro 234 KRVN----KVENIAIIDYGLEYQSISM--PLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNT 307 (416) Q Consensus 234 ~~~~----~~~~~~vl~~g~~~~~~~~--~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~ 307 (416) ++.+ |+|+++||++|++|++++. +++|+|++|.+++++++||++|||||.+||. ++++|.|++.+.|+++| T Consensus 227 ~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~---~~~sn~e~~~~~f~~~t 303 (403) T protein:vir:10 227 QLDYNPSTGQSSVLILDGGMKAKPYSQISSFKDLDFKEDIEGFNKSICLAFGVPQVLLDG---GNNANIRPNIELFYYMT 303 (403) T ss_pred HHHhCCcccCcceeecCCCceeEEecccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCC---CCCcCHHHHHHHHHHHH Confidence 8764 5678999999999999875 6789999999999999999999999999974 57789999999999999 Q ss_pred HHHHHHHHHHHHHHhhcCchhcccccchhhhhhhh--hhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC--CCCeE Q lcl|Aclame:pro 308 LQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSE--LRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIE--NGDKY 383 (416) Q Consensus 308 l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l--~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~--ggd~~ 383 (416) |.|++++|+++|+++| +.+++||++.+ ++.|.+++++++.+++++|+||+||+|+++|+||+| +||++ T Consensus 304 l~P~~~~ie~~l~~~L--------~~~~~~d~~~~~~l~~D~~~~~~~~~~~~~~G~lT~NE~R~~~gl~pi~~~~~d~~ 375 (403) T protein:vir:10 304 IIPMLNKLTSSLTFFF--------GYKITPNTKEVAALTPDKEAEAKHLTSLVNNGIITGNEARSELNLEPLDDEQMNKI 375 (403) T ss_pred HHHHHHHHHHHHHHhc--------CceeeeccchhhhcccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCccccccc Confidence 9999999999999987 34577888755 888999999999999999999999999999999995 69999 Q ss_pred eeccCccccccccccccccCCcccCCCCcc Q lcl|Aclame:pro 384 ISSLNYVFLDFLEEYQRLKAGGAMKGGDNK 413 (416) Q Consensus 384 ~~~~n~~~~~~~~~~~~~~~~~~~~gge~~ 413 (416) ++|+|+......... ...+++..+.|++ T Consensus 376 ~~p~n~~~~~~~~~~--~e~~~~~~~~~g~ 403 (403) T protein:vir:10 376 RIPANVAGSATGVSG--QEGGRPKGSTEGD 403 (403) T ss_pred ccccccccccccCCC--CcCCCCCCCcCCC Confidence 999998754332211 1111222222222 No 54 >protein:vir:4854 Length: 386 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049394;genbank:gi:9632422;genbank:GeneID:1258515 Probab=100.00 E-value=1.8e-80 Score=457.72 Aligned_cols=378 Identities=19% Similarity=0.278 Sum_probs=319.0 Q ss_pred Ccchhhhcc-ccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLLERMFEK-RSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) |.|.+..++ +.........+.......+. ..+..+..++.+.|+++|+|++||++||+++|++|+++++. T Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~v~~~i~~ia~~ia~~p~~~~~~-------- 71 (386) T protein:vir:48 1 MPIFNITNLATESPPISQGGFFDITDPDFL-STLNGSEWVSAESALRNSDLFSIINQLSNDLATVKLTASRK-------- 71 (386) T ss_pred Ccccccccccccccccccccccccccchhc-ccccCCceechhhhhcchHHHHHHHHHHHhhccCceeeccc-------- Confidence 877776554 33333333333222222222 23456778899999999999999999999999999999853 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCC-- Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNG-- 157 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~-- 157 (416) ....|+.+||++||+.+||+.++.+++++||+|+++.|+..|++.+|+|++|++|++..+.+++.++|.+...+ T Consensus 72 ----~~~~l~~~pN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~~~ 147 (386) T protein:vir:48 72 ----QLQGIIDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNKDGIYYNITFDDPR 147 (386) T ss_pred ----hhHHHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEecCceeEEEEcCCCceEEEEEEecCcc Confidence 24568899999999999999999999999999999999999999999999999999999998888887775443 Q ss_pred --eeEEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 158 --KAIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK 234 (416) Q Consensus 158 --~~~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~ 234 (416) ..+.+++++|||+++++.++ ++|+||+..+..++....++.+++.++|+||++|+++++.++..++++.+++++.|. T Consensus 148 ~~~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ii~~~~~~~~e~~~~~~~~~~ 227 (386) T protein:vir:48 148 IPPKQHVPQGDVLHFKLLSVDGGLTSVSPLMALSRELNIQKASDKLTLNSLKNALNANGILKIKGGGLLDFKTKLSRSRQ 227 (386) T ss_pred ccceeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHHHHH Confidence 45679999999999888776 899999999999999999999999999999999999999999999999999999886 Q ss_pred Hh-hcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 235 RV-NKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIV 313 (416) Q Consensus 235 ~~-~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~ 313 (416) .. .++|+++||++|++|++++.+++|+|++|.+++++++||++|||||.+||. .+++++.+++.+.|++.||.|+++ T Consensus 228 ~~~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~--~~~~~~~e~~~~~~~~~~l~P~~~ 305 (386) T protein:vir:48 228 AMKQMQGGPLVLDDLEEFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPENVVGG--QGDQQSSLEMSLDLYNKAVSRYLR 305 (386) T ss_pred HhhcCCCCceecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCC--CCCcccHHHHHHHHHHHHHHHHHH Confidence 54 467899999999999999999999999999999999999999999999985 457889999999999999999999 Q ss_pred HHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEe-eccCcccc Q lcl|Aclame:pro 314 NFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYI-SSLNYVFL 392 (416) Q Consensus 314 ~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~-~~~n~~~~ 392 (416) .|+++|+++|++. ++++....+..|....+..+.+++++|++|+||+|+.+|++|++++|... ...|.. T Consensus 306 ~ie~~l~~~l~~~--------~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~lg~~~~~~~~~~~~~~~~~~-- 375 (386) T protein:vir:48 306 PFLSELSQKLSCD--------VDADILPAVDPTGSNSVSRINSMVKSGTLAQNQGLYILQQAEILPKELPEGENPNKT-- 375 (386) T ss_pred HHHHHHHHhhcch--------hhcchhhhhccChHHHHHHHHHHHhCCCcCHHHHHHHhhcCCCCCccchhhcCCCCC-- Confidence 9999999999864 45666667778888888999999999999999999999999988776432 111221 Q ss_pred ccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 393 DFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 393 ~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +.+|||++++- T Consensus 376 -------------~~~gGd~~~~~ 386 (386) T protein:vir:48 376 -------------TLKGGEINGED 386 (386) T ss_pred -------------ccCCCCCCCCC Confidence 23445544444 No 55 >protein:vir:9507 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:170 # MgeName: phiN315 # Cross-refs: genbank:acc:NP_835554;genbank:gi:30043953;genbank:GeneID:1260535 Probab=100.00 E-value=2e-80 Score=457.50 Aligned_cols=379 Identities=17% Similarity=0.217 Sum_probs=312.6 Q ss_pred Ccch-hhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLLE-RMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) |.|. ++|+++....... ....+..++.+.++++++|++||++||+++|++||++++.+ +. T Consensus 1 Mg~f~~lf~~~~~~~~~~--------------~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~-----~~ 61 (395) T protein:vir:95 1 MSILEKIFKTRKDITYML--------------DLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGN-----RI 61 (395) T ss_pred CchhhhhhccCccccccc--------------cchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCC-----cc Confidence 8765 5777654332111 11234567778899999999999999999999999999743 35 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCee Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKA 159 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 159 (416) .+|+++++|+.+||++||+.+||+.++.++++.|++|+++.++.. ++++++..+++..........+.+...+.. T Consensus 62 ~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (395) T protein:vir:95 62 QKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSKE-----LLIADSFYREEYALYDDIFKDVTVKDYTYQ 136 (395) T ss_pred ccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCCC-----eEecCCccceeEeecCcceeEEEEcCceee Confidence 689999999999999999999999999999999999988766542 455554444444333333333333333445 Q ss_pred EEechhheeeeccCCCC-ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCc-CCHHHHHHHHHHHHHhh Q lcl|Aclame:pro 160 IELYDYEVLHFKGLSTD-GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAF-LDEKPKENVRKEWKRVN 237 (416) Q Consensus 160 ~~~~~~~vih~~~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~-~~~e~~~~~~~~~~~~~ 237 (416) ..+++++|||+++++.+ ..+|+||+..+..+++... +.|.+++.++++++.++. .++++.+++++.|++.. T Consensus 137 ~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~~~~~~~~~~ 209 (395) T protein:vir:95 137 RTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLF 209 (395) T ss_pred eeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHHh Confidence 68999999999987654 5789999999988887544 346678888888887654 68999999999998765 Q ss_pred cC---Cc--eeecCCCceeEeccCChhhH-----HHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHH Q lcl|Aclame:pro 238 KV---EN--IAIIDYGLEYQSISMPLQEA-----QFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNT 307 (416) Q Consensus 238 ~~---~~--~~vl~~g~~~~~~~~~~~d~-----~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~ 307 (416) ++ ++ ++++++|++|++++++++++ |++|.+++++++||++|||||.+|+ +++++.|+++++|+++| T Consensus 210 ~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~----~~~sn~e~~~~~~~~~~ 285 (395) T protein:vir:95 210 NTFNKNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY----GETADLEKNTLVFEKFC 285 (395) T ss_pred ccccccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CcccCHHHHHHHHHHHH Confidence 33 33 55689999999999988765 8999999999999999999999997 57899999999999999 Q ss_pred HHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC--CeEee Q lcl|Aclame:pro 308 LQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENG--DKYIS 385 (416) Q Consensus 308 l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~gg--d~~~~ 385 (416) |.|++.+||++||++|+++.++..+ ++|+++.+++.|.+++++++.+++++|+||+||+|+++|+||+||| |++++ T Consensus 286 l~P~~~~ie~~l~~kL~~~~~~~~~--~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g~~d~~~~ 363 (395) T protein:vir:95 286 LTPLLKKIQNELNAKLITQSMYLKD--TRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLI 363 (395) T ss_pred HHHHHHHHHHHHHHhhcChhhhccc--ceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeee Confidence 9999999999999999998776554 6789999999999999999999999999999999999999999876 99999 Q ss_pred ccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 386 SLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 386 ~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) |+|+++++.+...+......+.+|||++++| T Consensus 364 ~~n~~~~~~~~~~~~~~~~~~~kgg~~~~~g 394 (395) T protein:vir:95 364 TKNYEKANSGENDEKEKDENTLKGGDEDESG 394 (395) T ss_pred ccccccccccccccCcccccccCCCCCCCCC Confidence 9999999998888877777888999999999 No 56 >protein:vir:100650 Length: 395 # NCBI annotation: 77ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1476 # MgeName: 77 # Cross-refs: genbank:acc:NP_958604;genbank:gi:41189523;genbank:GeneID:2743796 Probab=100.00 E-value=2e-80 Score=457.50 Aligned_cols=379 Identities=17% Similarity=0.217 Sum_probs=312.6 Q ss_pred Ccch-hhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLLE-RMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) |.|. ++|+++....... ....+..++.+.++++++|++||++||+++|++||++++.+ +. T Consensus 1 Mg~f~~lf~~~~~~~~~~--------------~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~-----~~ 61 (395) T protein:vir:10 1 MSILEKIFKTRKDITYML--------------DLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGN-----RI 61 (395) T ss_pred CchhhhhhccCccccccc--------------cchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCC-----cc Confidence 8765 5777654332111 11234567778899999999999999999999999999743 35 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCee Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKA 159 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 159 (416) .+|+++++|+.+||++||+.+||+.++.++++.|++|+++.++.. ++++++..+++..........+.+...+.. T Consensus 62 ~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (395) T protein:vir:10 62 QKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSKE-----LLIADSFYREEYALYDDIFKDVTVKDYTYQ 136 (395) T ss_pred ccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCCC-----eEecCCccceeEeecCcceeEEEEcCceee Confidence 689999999999999999999999999999999999988766542 455554444444333333333333333445 Q ss_pred EEechhheeeeccCCCC-ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCc-CCHHHHHHHHHHHHHhh Q lcl|Aclame:pro 160 IELYDYEVLHFKGLSTD-GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAF-LDEKPKENVRKEWKRVN 237 (416) Q Consensus 160 ~~~~~~~vih~~~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~-~~~e~~~~~~~~~~~~~ 237 (416) ..+++++|||+++++.+ ..+|+||+..+..+++... +.|.+++.++++++.++. .++++.+++++.|++.. T Consensus 137 ~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~~~~~~~~~~ 209 (395) T protein:vir:10 137 RTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLF 209 (395) T ss_pred eeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHHh Confidence 68999999999987654 5789999999988887544 346678888888887654 68999999999998765 Q ss_pred cC---Cc--eeecCCCceeEeccCChhhH-----HHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHH Q lcl|Aclame:pro 238 KV---EN--IAIIDYGLEYQSISMPLQEA-----QFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNT 307 (416) Q Consensus 238 ~~---~~--~~vl~~g~~~~~~~~~~~d~-----~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~ 307 (416) ++ ++ ++++++|++|++++++++++ |++|.+++++++||++|||||.+|+ +++++.|+++++|+++| T Consensus 210 ~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~----~~~sn~e~~~~~~~~~~ 285 (395) T protein:vir:10 210 NTFNKNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY----GETADLEKNTLVFEKFC 285 (395) T ss_pred ccccccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CcccCHHHHHHHHHHHH Confidence 33 33 55689999999999988765 8999999999999999999999997 57899999999999999 Q ss_pred HHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC--CeEee Q lcl|Aclame:pro 308 LQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENG--DKYIS 385 (416) Q Consensus 308 l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~gg--d~~~~ 385 (416) |.|++.+||++||++|+++.++..+ ++|+++.+++.|.+++++++.+++++|+||+||+|+++|+||+||| |++++ T Consensus 286 l~P~~~~ie~~l~~kL~~~~~~~~~--~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g~~d~~~~ 363 (395) T protein:vir:10 286 LTPLLKKIQNELNAKLITQSMYLKD--TRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLI 363 (395) T ss_pred HHHHHHHHHHHHHHhhcChhhhccc--ceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeee Confidence 9999999999999999998776554 6789999999999999999999999999999999999999999876 99999 Q ss_pred ccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 386 SLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 386 ~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) |+|+++++.+...+......+.+|||++++| T Consensus 364 ~~n~~~~~~~~~~~~~~~~~~~kgg~~~~~g 394 (395) T protein:vir:10 364 TKNYEKANSGENDEKEKDENTLKGGDEDESG 394 (395) T ss_pred ccccccccccccccCcccccccCCCCCCCCC Confidence 9999999998888877777888999999999 No 57 >protein:vir:101289 Length: 395 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1591 # MgeName: phiNM3 # Cross-refs: genbank:acc:YP_908829;genbank:gi:118725093;genbank:GeneID:4555860 Probab=100.00 E-value=2e-80 Score=457.50 Aligned_cols=379 Identities=17% Similarity=0.217 Sum_probs=312.6 Q ss_pred Ccch-hhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLLE-RMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) |.|. ++|+++....... ....+..++.+.++++++|++||++||+++|++||++++.+ +. T Consensus 1 Mg~f~~lf~~~~~~~~~~--------------~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~-----~~ 61 (395) T protein:vir:10 1 MSILEKIFKTRKDITYML--------------DLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGN-----RI 61 (395) T ss_pred CchhhhhhccCccccccc--------------cchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCC-----cc Confidence 8765 5777654332111 11234567778899999999999999999999999999743 35 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCee Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKA 159 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 159 (416) .+|+++++|+.+||++||+.+||+.++.++++.|++|+++.++.. ++++++..+++..........+.+...+.. T Consensus 62 ~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (395) T protein:vir:10 62 QKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSKE-----LLIADSFYREEYALYDDIFKDVTVKDYTYQ 136 (395) T ss_pred ccchHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCCC-----eEecCCccceeEeecCcceeEEEEcCceee Confidence 689999999999999999999999999999999999988766542 455554444444333333333333333445 Q ss_pred EEechhheeeeccCCCC-ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCc-CCHHHHHHHHHHHHHhh Q lcl|Aclame:pro 160 IELYDYEVLHFKGLSTD-GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAF-LDEKPKENVRKEWKRVN 237 (416) Q Consensus 160 ~~~~~~~vih~~~~~~~-~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~-~~~e~~~~~~~~~~~~~ 237 (416) ..+++++|||+++++.+ ..+|+||+..+..+++... +.|.+++.++++++.++. .++++.+++++.|++.. T Consensus 137 ~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~~~~~~~~~~ 209 (395) T protein:vir:10 137 RTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLF 209 (395) T ss_pred eeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHHHh Confidence 68999999999987654 5789999999988887544 346678888888887654 68999999999998765 Q ss_pred cC---Cc--eeecCCCceeEeccCChhhH-----HHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHH Q lcl|Aclame:pro 238 KV---EN--IAIIDYGLEYQSISMPLQEA-----QFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNT 307 (416) Q Consensus 238 ~~---~~--~~vl~~g~~~~~~~~~~~d~-----~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~ 307 (416) ++ ++ ++++++|++|++++++++++ |++|.+++++++||++|||||.+|+ +++++.|+++++|+++| T Consensus 210 ~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~----~~~sn~e~~~~~~~~~~ 285 (395) T protein:vir:10 210 NTFNKNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIY----GETADLEKNTLVFEKFC 285 (395) T ss_pred ccccccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CcccCHHHHHHHHHHHH Confidence 33 33 55689999999999988765 8999999999999999999999997 57899999999999999 Q ss_pred HHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC--CeEee Q lcl|Aclame:pro 308 LQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENG--DKYIS 385 (416) Q Consensus 308 l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~gg--d~~~~ 385 (416) |.|++.+||++||++|+++.++..+ ++|+++.+++.|.+++++++.+++++|+||+||+|+++|+||+||| |++++ T Consensus 286 l~P~~~~ie~~l~~kL~~~~~~~~~--~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g~~d~~~~ 363 (395) T protein:vir:10 286 LTPLLKKIQNELNAKLITQSMYLKD--TRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLI 363 (395) T ss_pred HHHHHHHHHHHHHHhhcChhhhccc--ceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeee Confidence 9999999999999999998776554 6789999999999999999999999999999999999999999876 99999 Q ss_pred ccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 386 SLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 386 ~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) |+|+++++.+...+......+.+|||++++| T Consensus 364 ~~n~~~~~~~~~~~~~~~~~~~kgg~~~~~g 394 (395) T protein:vir:10 364 TKNYEKANSGENDEKEKDENTLKGGDEDESG 394 (395) T ss_pred ccccccccccccccCcccccccCCCCCCCCC Confidence 9999999998888877777888999999999 No 58 >protein:vir:7407 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839924;genbank:gi:30089894;genbank:GeneID:1260681 Probab=100.00 E-value=5.7e-80 Score=455.03 Aligned_cols=375 Identities=17% Similarity=0.240 Sum_probs=307.8 Q ss_pred Ccchhhhccccccccc---cccch-hHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDH---EDGFN-NILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI 76 (416) Q Consensus 1 m~~~~~f~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 76 (416) |.|.++|+++...... ...+. ......++.....++..++.+.|+++++|++||++||++||++|+++++... T Consensus 3 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~v~~ia~~ia~lp~~~~~~~~--- 79 (392) T protein:vir:74 3 LPILNFINQTNDPPEAGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) T ss_pred chhhhhhhcccCcccccccccccccCchhhhhhhccCCCCcccchhhhhcchHHHHHHHHHHHhhccCceeeccchh--- Confidence 8888888765432211 11111 1112233333345677889999999999999999999999999999987543 Q ss_pred eeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeC Q lcl|Aclame:pro 77 ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLN 156 (416) Q Consensus 77 ~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 156 (416) ..|+.+||++||+++||+.++.+++++||||+++.|+..|++.+|+|++|++|++..+.+++.++|.+... T Consensus 80 ---------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~~~~~~y~~~~~ 150 (392) T protein:vir:74 80 ---------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFD 150 (392) T ss_pred ---------hhhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEec Confidence 34778999999999999999999999999999999999999999999999999999999888888777654 Q ss_pred C----eeEEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCc--CCHHHHHHH Q lcl|Aclame:pro 157 G----KAIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAF--LDEKPKENV 229 (416) Q Consensus 157 ~----~~~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~--~~~e~~~~~ 229 (416) + ..+.+++++|||+++++.++ ++|+||+..+..++....++++++.++|+||++|++++++++. .++++.+++ T Consensus 151 ~~~~~~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~~~~~~~~~~~~ 230 (392) T protein:vir:74 151 DPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASR 230 (392) T ss_pred CCccceeEEEcCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchHHHHHHH Confidence 3 34679999999999988877 7899999999999999999999999999999999999999764 456677888 Q ss_pred HHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 RKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQ 309 (416) Q Consensus 230 ~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~ 309 (416) ++.|.+..++|+++||++|++|++++++++|+|++|.+++++++||++|||||.+||+..+++ +.+++.++|+++||. T Consensus 231 ~~~~~~~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~--~~~e~~~~~~~~~l~ 308 (392) T protein:vir:74 231 SRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQQISGMYASALN 308 (392) T ss_pred HHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcc--cHHHHHHHHHHHHHH Confidence 888999999999999999999999999999999999999999999999999999999765433 446678899999999 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCCCCCeEeec Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELL---ERNPIENGDKYISS 386 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~---gl~p~~ggd~~~~~ 386 (416) |+++.|+++|+++|++. ++||...+++.|.+.++..+.+++++|++|+||+|+++ |+.| +++... T Consensus 309 p~~~~ie~~l~~~l~~~--------~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~near~~~~~~g~~p----ne~r~~ 376 (392) T protein:vir:74 309 RYLRPAISELEYKLSDH--------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIP----KDLPAP 376 (392) T ss_pred HHHHHHHHHHHHhccch--------hcccchhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCc----cccchh Confidence 99999999999998753 67888999999999999999999999999999999987 3222 111112 Q ss_pred cCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 387 LNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 387 ~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) .|+-|+ +|||.++.= T Consensus 377 enl~~~---------------~~Gd~~~p~ 391 (392) T protein:vir:74 377 ENTNKK---------------TTGQSNEPV 391 (392) T ss_pred cCCCCC---------------CCCCCCCCC Confidence 222221 122211111 No 59 >protein:vir:95965 Length: 385 # NCBI annotation: ORF011 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1594 # MgeName: 2638A # Cross-refs: genbank:acc:YP_239800;genbank:gi:66395461;genbank:GeneID:5132882 Probab=100.00 E-value=5.1e-80 Score=455.27 Aligned_cols=368 Identities=18% Similarity=0.175 Sum_probs=300.4 Q ss_pred Ccc-hhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLL-ERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) |.| +++|+++...+..... . ....++.+.|+++++|++||++||+++|++||++++.+. . T Consensus 1 Mg~f~~~f~~~~~~~~~~~~------~--------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~-----~ 61 (385) T protein:vir:95 1 MGLFDSVFKRHSELSWMYDL------E--------FLQDKSKKAYLKQIALNTVVEMVARTISQSEFRVMKNNT-----K 61 (385) T ss_pred CchhhhhhccCcccccccch------h--------hhhccchhhhhhhHHHHHHHHHHHHHHcccceeeeecCc-----c Confidence 866 6667655433222110 0 122355678999999999999999999999999997543 2 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCee Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKA 159 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 159 (416) .+|+++++|+.+||++||+++||+.++.+++++||||+++.++. +.+..++++.+..+......... ..+...+.. T Consensus 62 ~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 137 (385) T protein:vir:95 62 EKGTLYYLLNVRPNRNQNAVDFWQKFIFKLIMDNEVLVVKNDEG-HFFVADDFEKEDELGLYSHRFTN---VLVNDFEFK 137 (385) T ss_pred ccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCceEEEEecCC-Ceeecccccccccccccccccee---eeeccccee Confidence 46899999999999999999999999999999999999987765 44555666666555543322111 111222345 Q ss_pred EEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC--cCCHHHHHHHHHHHHHh Q lcl|Aclame:pro 160 IELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA--FLDEKPKENVRKEWKRV 236 (416) Q Consensus 160 ~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~--~~~~e~~~~~~~~~~~~ 236 (416) ..+++++|||+++++.++ .+|+||+..+..++....+.. .+++.|+++++++. .+++++.+++++.|+.. T Consensus 138 ~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~-------~~~~~~~g~l~~~~~~~~~~e~~~~~~~~~~~~ 210 (385) T protein:vir:95 138 RVFTMDDVIYLKYNNQKLDAFSLGLFEDYGEIFGRMIDLQ-------MLNNQIRGILKVDATKFYNKEKQKELQAYIDTL 210 (385) T ss_pred eeeccccEEEecCCCCCcccccchHHHHHHHHHHHHHHHH-------HhcCCCceEEEeCCccCCCHHHHHHHHHHHHHH Confidence 679999999999988775 689999999999887655432 22345778888754 57899999999999866 Q ss_pred hc-----CCceeecCCCceeEeccC------ChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHH Q lcl|Aclame:pro 237 NK-----VENIAIIDYGLEYQSISM------PLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVR 305 (416) Q Consensus 237 ~~-----~~~~~vl~~g~~~~~~~~------~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~ 305 (416) .+ +++++++++|++|+++++ +++|+|++|.+++++++||++|||||.+|+ ++++|.|++..+|++ T Consensus 211 ~~g~~~~~~~i~~l~~g~~~~~l~~~~~~~~s~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~----~~~sn~e~~~~~~~~ 286 (385) T protein:vir:95 211 FDAFQNNTIAVVPLTEGLAYEEHSNRGAAQSAQQFSELNELKKTVLTDVARMIGVPPSLVL----GEMADLEKTIESYLQ 286 (385) T ss_pred hhhhhhcCCceEEcCCCceeEeecccccccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCCcCHHHHHHHHHH Confidence 43 345889999999999874 667999999999999999999999999996 689999999999999 Q ss_pred HHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC--CCCCeE Q lcl|Aclame:pro 306 NTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPI--ENGDKY 383 (416) Q Consensus 306 ~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~--~ggd~~ 383 (416) .||.|++.+||++||++|+++.++. +.+++||++++++.|.+++++++.+++++|+||+||+|+++|+||+ ||||++ T Consensus 287 ~~l~P~~~~ie~~l~~~L~~~~~~~-~~~~~fd~~~l~~~D~~~~~~~~~~~~~~g~lt~NE~R~~~g~~p~~~~~gd~~ 365 (385) T protein:vir:95 287 FCINPLLRKIEAELNSKFFYQDEYL-NDDMHIKVVGIDKRDPLKLSEAIDKLVASGTFTRNQVRIMTGEEPADDPELDKF 365 (385) T ss_pred HHHHHHHHHHHHHHHhhcCChhhcc-cceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCcee Confidence 9999999999999999999987764 4589999999999999999999999999999999999999999998 689999 Q ss_pred eeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 384 ISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 384 ~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) ++|+|+++++. .+|||+++| T Consensus 366 ~~~~n~~~~~~------------~kgge~~~e 385 (385) T protein:vir:95 366 IITKNLQSADA------------FKGGESNEE 385 (385) T ss_pred eecccceeccc------------ccCCCCCCC Confidence 99999998853 488999999 No 60 >protein:vir:100187 Length: 385 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025029;genbank:gi:48697262;genbank:GeneID:2948285 Probab=100.00 E-value=3.8e-79 Score=450.52 Aligned_cols=371 Identities=19% Similarity=0.264 Sum_probs=305.8 Q ss_pred Ccchhhh--ccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCccee Q lcl|Aclame:pro 1 MLLERMF--EKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIER 78 (416) Q Consensus 1 m~~~~~f--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 78 (416) |.|..+| ++++ .+.........+...+.+. ..+..++.+.|+++++|++||++||+++|++||++++ T Consensus 1 Mg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~al~~~~v~~~i~~ia~~ia~~p~~v~~-------- 69 (385) T protein:vir:10 1 MGLLTPRNFNKRK-AKNMVYPSNPAFFTTTVGG--MQLSYVSALSALQNTNVYSVINRIASDVASAHFKTEN-------- 69 (385) T ss_pred Cccccchhccccc-ccccccccchhhhhhhccc--cCccccCHHHhhccHHHHHHHHHHHHHHhhCceeeec-------- Confidence 7766433 3333 3333233333334444332 2356688999999999999999999999999999874 Q ss_pred eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCe Q lcl|Aclame:pro 79 KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGK 158 (416) Q Consensus 79 ~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 158 (416) |+... |+.+||++||+++||+.++.+++++||||+++.|+ +.+++|+++.+|++..+..+..+++.....+. T Consensus 70 ---~~~~~-ll~~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~r~----~~~~~p~~~~~v~~~~~~~~~~~~~~~~~~~~ 141 (385) T protein:vir:10 70 ---TATLN-RLESPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ----NLEHIPNSDVQINYLPGNMGIVYTVLESNDRP 141 (385) T ss_pred ---cchhh-hhhcCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC----ceeEeecCCceEEEEEcCCceEEEEEEcCCce Confidence 22333 55799999999999999999999999999999875 57899999999988877665554444455566 Q ss_pred eEEechhheeeeccCCC---CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-CHHHHHHHHHHHH Q lcl|Aclame:pro 159 AIELYDYEVLHFKGLST---DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-DEKPKENVRKEWK 234 (416) Q Consensus 159 ~~~~~~~~vih~~~~~~---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~~ 234 (416) .+++++++|||+|+++. ++++|+||+..+..++....++.+++.++|+||++|+++++.++.. ++++.+++++.|+ T Consensus 142 ~~~~~~~eiihik~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~gil~~~~~~~~~e~~~~~~~~~~ 221 (385) T protein:vir:10 142 QMVLRQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKDLESAREEFE 221 (385) T ss_pred EEEEccccEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHHHHHHH Confidence 78899999999998654 4678999999999999999999999999999999999999998766 5789999999998 Q ss_pred Hhh---cCCceeecCCCceeEeccCChhhHHHH-HHHHHHHHHHHHHhccchhhccccc--CCCcccHHHHHHHHHHHHH Q lcl|Aclame:pro 235 RVN---KVENIAIIDYGLEYQSISMPLQEAQFV-ESMKFNKAQISMIYKVPLHKLNELD--KATFSNIEHQSIEYVRNTL 308 (416) Q Consensus 235 ~~~---~~~~~~vl~~g~~~~~~~~~~~d~~~~-e~~~~~~~~Ia~~~gvp~~~lg~~~--~~~~s~~e~~~~~f~~~~l 308 (416) +.. ++++++|+++|++|++++.++.|++++ |.+++++++||++|||||.+||..+ ++++++.|++. .|+..|| T Consensus 222 ~~~~~~n~~~~~vl~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~sn~eq~~-~~~~~~l 300 (385) T protein:vir:10 222 KANTGDNSGRLMVLPDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHSNIDQIK-ATYLANL 300 (385) T ss_pred HHhCccccCCccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCcccccHHHHH-HHHHHHH Confidence 765 567899999999999999999999974 9999999999999999999999754 45788988765 5556799 Q ss_pred HHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeec Q lcl|Aclame:pro 309 QPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISS 386 (416) Q Consensus 309 ~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~ 386 (416) .|+++.|+++|+++|++. +++|+++.+++.|.+++++++.+++++|+||+||+|+++|++|+|+ ||++.++ T Consensus 301 ~P~~~~ie~~l~~~l~~~-------~~~f~~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~p~~~~~~~~~~ 373 (385) T protein:vir:10 301 NSYVNPIVDELRLKMNAP-------DLELDIKDMLDVDDSALINQVSNLAKSGVLGAEQAQFILTRSGFLPDNLPEFKPL 373 (385) T ss_pred HHHHHHHHHHHHHhhCCc-------eEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCccCCCCCccccCc Confidence 999999999999999753 4899999999999999999999999999999999999999999975 5666666 Q ss_pred cCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 387 LNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 387 ~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) .+. .+|||++|+ T Consensus 374 ~~~-----------------~~~g~~~dn 385 (385) T protein:vir:10 374 TTQ-----------------VKGGDEGDN 385 (385) T ss_pred ccc-----------------cCCCCCCCC Confidence 553 245555555 No 61 >protein:vir:100882 Length: 383 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358762;genbank:gi:78000027;genbank:GeneID:3726153 Probab=100.00 E-value=4.5e-79 Score=450.10 Aligned_cols=371 Identities=19% Similarity=0.260 Sum_probs=308.0 Q ss_pred Ccch--hhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCccee Q lcl|Aclame:pro 1 MLLE--RMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIER 78 (416) Q Consensus 1 m~~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 78 (416) |.|. ++|+|++... .....+..+...+.+. ..+..++.+.|+++++|++||++||+++|++||++++ T Consensus 1 Mg~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~--~~~~~v~~~~~l~~~~v~~~i~~ia~~ia~~~~~~~~-------- 69 (383) T protein:vir:10 1 MGLLTPKNFSKRNAKN-MVYPSNPAFFTTTVGG--MQLSYVSALSALQNTNVYSVINRIASDVSSAHFKTEN-------- 69 (383) T ss_pred CCcccccccccccccc-cccccchhhhhhhccC--ccccccchhHhhcchHHHHHHHHHHHhhccCceeecc-------- Confidence 6554 3455554333 3333333333333322 2455678899999999999999999999999999874 Q ss_pred eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCe Q lcl|Aclame:pro 79 KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGK 158 (416) Q Consensus 79 ~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~ 158 (416) |+... |+.+||++||+.+||+.++.+++++||||+++.|+ +.+++|+++.+|++..+.++..+.+.+...+. T Consensus 70 ---~~~~~-ll~~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~~~----~~~~~p~~~~~v~~~~~~~~~~~~~~~~~~~~ 141 (383) T protein:vir:10 70 ---TATLN-RLESPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ----NLEHIPNSDVQINYLPGNMGIVYTVLESNDRP 141 (383) T ss_pred ---cchhh-hhhCCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC----ceeEeecCcceEEEEEcCCceEEEEEEcCCce Confidence 23334 44699999999999999999999999999999864 57889999988888877666555555556667 Q ss_pred eEEechhheeeeccCCC---CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-CHHHHHHHHHHHH Q lcl|Aclame:pro 159 AIELYDYEVLHFKGLST---DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-DEKPKENVRKEWK 234 (416) Q Consensus 159 ~~~~~~~~vih~~~~~~---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~~ 234 (416) .+++++++|||+|+++. ++.+|+||+..+..++....++.+++.++|+||++|+++++.++.. ++++.+++++.|+ T Consensus 142 ~~~~~~~evih~r~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~~e~~~~~~~~~~ 221 (383) T protein:vir:10 142 KMVLRQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKDLESAREEFE 221 (383) T ss_pred EEEEcccceEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHHHHHHH Confidence 88999999999997654 3578999999999999999999999999999999999999999876 5889999999998 Q ss_pred Hhh---cCCceeecCCCceeEeccCChhhHHH-HHHHHHHHHHHHHHhccchhhccccc--CCCcccHHHHHHHHHHHHH Q lcl|Aclame:pro 235 RVN---KVENIAIIDYGLEYQSISMPLQEAQF-VESMKFNKAQISMIYKVPLHKLNELD--KATFSNIEHQSIEYVRNTL 308 (416) Q Consensus 235 ~~~---~~~~~~vl~~g~~~~~~~~~~~d~~~-~e~~~~~~~~Ia~~~gvp~~~lg~~~--~~~~s~~e~~~~~f~~~~l 308 (416) +.. ++++++|+++|++|++++.+++|+++ .|.+++++++||++|||||.+||..+ +.++++.|+++. ++..|| T Consensus 222 ~~~~~~n~~~~~vl~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~~~sn~eq~~~-~~~~~l 300 (383) T protein:vir:10 222 KANTGDNSGRLMVLPDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHSNIDQIKA-TYLANL 300 (383) T ss_pred HHhCccccCCccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCCccccHHHHHH-HHHHHH Confidence 764 56789999999999999999999997 59999999999999999999999754 457889888875 455799 Q ss_pred HHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccC Q lcl|Aclame:pro 309 QPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLN 388 (416) Q Consensus 309 ~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n 388 (416) .|+++.|+++|+++|+. .+++||++.+++.|.+++++++.+++++|+||+||+|+++|++|+|+||......+ T Consensus 301 ~P~~~~ie~~l~~~l~~-------~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~t~nE~R~~lg~~p~~~~d~~~~~~~ 373 (383) T protein:vir:10 301 NSYVNPIVDELRLKMNA-------PDLELDIKDMLDVDDSILINQVSNLAKSGVLGAEQAQFILTRSGFLPDNLPEFKPL 373 (383) T ss_pred HHHHHHHHHHHHHhhCC-------ceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCcccCCcccccCCC Confidence 99999999999999874 35899999999999999999999999999999999999999999999997554333 Q ss_pred ccccccccccccccCCcccCCCCcc Q lcl|Aclame:pro 389 YVFLDFLEEYQRLKAGGAMKGGDNK 413 (416) Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~gge~~ 413 (416) . ++.+|||++ T Consensus 374 ~---------------~~~~gGd~e 383 (383) T protein:vir:10 374 T---------------NETKGGDDK 383 (383) T ss_pred c---------------ccCCCCCCC Confidence 2 234677777 No 62 >protein:vir:80796 Length: 574 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504121;genbank:gi:158079308;genbank:GeneID:5666445 Probab=100.00 E-value=1.5e-78 Score=447.20 Aligned_cols=404 Identities=13% Similarity=0.147 Sum_probs=308.0 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCc----c Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG----I 76 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~----~ 76 (416) |=|..-|+.+.....+.. +.. +...++ .+..+..-...+...|++|+.+|+.++|++||+++..+.++ + T Consensus 66 ~~~~~~~~~~~~~~~~~~-~~~-~l~~~~-----~~~iv~~~i~~~~~~V~~~~~~i~~~ia~lp~~i~~kd~~~~~~~~ 138 (574) T protein:vir:80 66 MSVNPGYKTKPSIRNSQD-LHK-TLKKFG-----NNIILNAIINTRSNQVSMYCKPARNSETGVGYEIRLKDIEAEPTSH 138 (574) T ss_pred ccccccccCcCccCCccc-HHH-HHHhhc-----cChhHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEeccCCCccch Confidence 122222222211111111 001 111111 11223334455677788999999999999999999876542 2 Q ss_pred eeeeccchhhhhcc---cccccc-CHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCc----- Q lcl|Aclame:pro 77 ERKPEHKSAHAVYA---RPNPYM-TAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTG----- 147 (416) Q Consensus 77 ~~~~~~~~~~~l~~---~PN~~~-s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~----- 147 (416) .....|+++.+|.. .|||++ |+.+||+.++.+++++||+|++++|+..|+|.+|||++|.+|++..+.++. T Consensus 139 ~~~~~~~l~~ll~~~~~~~nP~~~s~~ef~~~lv~~lll~Gnayi~i~r~~~G~~~~L~pl~p~~V~v~~d~~~~~~~~~ 218 (574) T protein:vir:80 139 DIANIKRIESFLENTAQFRDPNRDNFTTFCKKLVRATYMYDQVNFEKVFDKDGNFIKFDTVDPTTIFLATNGEGKLIKNG 218 (574) T ss_pred hhhhhhHHHHHHhccCCCCCCccccHHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCccccccCc Confidence 34456777777653 355664 788999999999999999999999999999999999999999999876553 Q ss_pred EEEEEEeeCCeeEEechhheeeeccCCCC----ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC--cC Q lcl|Aclame:pro 148 MLWYQTVLNGKAIELYDYEVLHFKGLSTD----GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA--FL 221 (416) Q Consensus 148 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~----~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~--~~ 221 (416) ..||++..++....+++++|||+++++.+ +.+|+||+..+..++....++.+++.++|+||++|+++++++. .+ T Consensus 219 ~~y~~~~~g~~~~~~~~~eiih~~~~~~~~~~~~~~G~spi~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~~l 298 (574) T protein:vir:80 219 ERFVQVIDNRIVAKFNERELAFAVRNPRADIEVGQYGYPELEIALKQFIAHENTEVFNDRFFSHGGTTRGILHVKTGQQQ 298 (574) T ss_pred eEEEEEeCCceEEEEccccEEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCC Confidence 56677777777889999999999975432 5689999999999999999999999999999999999998754 48 Q ss_pred CHHHHHHHHHHHHHhh----cCCce-eecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCC----- Q lcl|Aclame:pro 222 DEKPKENVRKEWKRVN----KVENI-AIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKA----- 291 (416) Q Consensus 222 ~~e~~~~~~~~~~~~~----~~~~~-~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~----- 291 (416) ++++.+++++.|++.+ ++|++ +++++|++|++++++++|++++|++++++++||++|||||.+||..+.+ T Consensus 299 s~e~~~~lk~~~~~~~~G~~n~g~~~vl~~~G~~~~~l~~s~~D~qfle~~~~~~~~Ia~afgVPp~~lG~~~~~t~~gs 378 (574) T protein:vir:80 299 SQQALDIFRREWRSSLAGINGSWQIPVVSAEDVKFVNMTPSANDMQFEKWLNYLINVISALYGIDPAEINFPNNGGATGS 378 (574) T ss_pred CHHHHHHHHHHHHHHhccccccccceeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccccccccccc Confidence 9999999999998764 56776 4557899999999999999999999999999999999999999986653 Q ss_pred -----CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHH Q lcl|Aclame:pro 292 -----TFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKD 366 (416) Q Consensus 292 -----~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~N 366 (416) +++|+|++...|++.||+|++..||++||++|++..+ .+++++|+..++...+... .+..++.+|+||+| T Consensus 379 ~~~~~n~sn~E~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~--~~~~~~f~~~d~~~~~~~~---~~~~~~~~G~lT~N 453 (574) T protein:vir:80 379 KGGSLNEGNSKEKMQASQNKGLQPLLRFIEDTVNTYIVAEFG--EKYQFQFRGGDLSAQLDKL---KIIEQEGKVFRTVN 453 (574) T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcC--CceEEEecccchhhHHHHH---HHHHHHhCCccCHH Confidence 4789999999999999999999999999999997654 4578888877776543322 23457889999999 Q ss_pred HHHHHhCCCCCCCCCeEeeccCccccccccccccccCC---------cccCCCCcc-----------C--CC Q lcl|Aclame:pro 367 EIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAG---------GAMKGGDNK-----------N--EG 416 (416) Q Consensus 367 E~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~---------~~~~gge~~-----------~--~~ 416 (416) |+|+++||||+||||++++|+|+++++........... ....+++.+ + .. T Consensus 454 E~R~~lgl~Pi~gGD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 525 (574) T protein:vir:80 454 EIRHDKGLEPIKGGDVILNGVHIQAIGQALQEEQLEYQRSQDRLNRLLELSGGDVEQPEPEEPKDSQNDTDV 525 (574) T ss_pred HHHHHhCCCCCCCCCEeeeccceeecccccccccCCccchhccccccccccCCCCCCCCCCCCCCccccccc Confidence 99999999999999999999999999866432211000 000000000 0 00 No 63 >protein:vir:1023 Length: 392 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076677;genbank:gi:13095786;genbank:GeneID:920364 Probab=100.00 E-value=1.8e-78 Score=446.82 Aligned_cols=375 Identities=17% Similarity=0.236 Sum_probs=305.6 Q ss_pred Ccchhhhccc-cccc--cccccc-hhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcc Q lcl|Aclame:pro 1 MLLERMFEKR-SGSS--DHEDGF-NNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI 76 (416) Q Consensus 1 m~~~~~f~~~-~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 76 (416) |.|.++|++. .... .....+ .......++.....++..++.+.|+++++|++||++||+++|++|+++++... T Consensus 3 m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~--- 79 (392) T protein:vir:10 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) T ss_pred chhhhhhhcccccccccccccccccCchhhhhhhhcCCCCceechHHhhccHHHHHHHHHHHHhhccCceeeccchh--- Confidence 7776655543 2221 111111 11122233344455677889999999999999999999999999999986542 Q ss_pred eeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeC Q lcl|Aclame:pro 77 ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLN 156 (416) Q Consensus 77 ~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 156 (416) ..|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|+|++|++|++..+.+++.++|.+... T Consensus 80 ---------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~~~~~~~~~~~~y~~~~~ 150 (392) T protein:vir:10 80 ---------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFD 150 (392) T ss_pred ---------hhHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEec Confidence 34778999999999999999999999999999999999999999999999999999999888888877654 Q ss_pred C----eeEEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCc--CCHHHHHHH Q lcl|Aclame:pro 157 G----KAIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAF--LDEKPKENV 229 (416) Q Consensus 157 ~----~~~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~--~~~e~~~~~ 229 (416) + ....+++++|||+++++.++ ++|+||+..+..++....++.+++.++|+||++|++++++++. .++++.+++ T Consensus 151 ~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~~~~~ 230 (392) T protein:vir:10 151 DPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASR 230 (392) T ss_pred CcccceeEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchHHHHHHH Confidence 3 34679999999999988876 7899999999999999999999999999999999999999764 456677788 Q ss_pred HHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 RKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQ 309 (416) Q Consensus 230 ~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~ 309 (416) ++.+.+..++++++||++|++|++++.+++|++++|.+++++++||++|||||.+||+...+ ++.+++.++|+++||. T Consensus 231 ~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~--~~~~~~~~~f~~~~l~ 308 (392) T protein:vir:10 231 SRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ--QSSIQQISGMYASALN 308 (392) T ss_pred HHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCc--ccHHHHHHHHHHHHHH Confidence 88888888999999999999999999999999999999999999999999999999975433 3456778899999999 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCCCCCeEeec Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELL---ERNPIENGDKYISS 386 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~---gl~p~~ggd~~~~~ 386 (416) |+++.|+++|+++|++. ++||...+.+.|...++..+.+++++|++|+||+|+++ |+.|. ++... T Consensus 309 P~~~~ie~~l~~~L~~~--------~~~d~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~g~~p~----e~r~~ 376 (392) T protein:vir:10 309 RYLRPAISELEYKLSDH--------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK----DLPAP 376 (392) T ss_pred HHHHHHHHHHHHhcccc--------ccccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHHhcCCCcc----ccchh Confidence 99999999999998753 67888888999999999999999999999999999987 44431 11111 Q ss_pred cCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 387 LNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 387 ~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) .|+-|+ .|||.++.= T Consensus 377 e~l~~~---------------~~Gd~~~p~ 391 (392) T protein:vir:10 377 ENTNKK---------------TTGQSNEPV 391 (392) T ss_pred cCCCCC---------------CCCCCCCCC Confidence 122121 112111111 No 64 >protein:vir:3989 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116497;genbank:gi:14251130;genbank:GeneID:921299 Probab=100.00 E-value=1.8e-78 Score=446.82 Aligned_cols=375 Identities=17% Similarity=0.236 Sum_probs=305.6 Q ss_pred Ccchhhhccc-cccc--cccccc-hhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcc Q lcl|Aclame:pro 1 MLLERMFEKR-SGSS--DHEDGF-NNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI 76 (416) Q Consensus 1 m~~~~~f~~~-~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 76 (416) |.|.++|++. .... .....+ .......++.....++..++.+.|+++++|++||++||+++|++|+++++... T Consensus 3 m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~--- 79 (392) T protein:vir:39 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) T ss_pred chhhhhhhcccccccccccccccccCchhhhhhhhcCCCCceechHHhhccHHHHHHHHHHHHhhccCceeeccchh--- Confidence 7776655543 2221 111111 11122233344455677889999999999999999999999999999986542 Q ss_pred eeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeC Q lcl|Aclame:pro 77 ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLN 156 (416) Q Consensus 77 ~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~ 156 (416) ..|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|+|++|++|++..+.+++.++|.+... T Consensus 80 ---------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~~~~~~~~~~~~y~~~~~ 150 (392) T protein:vir:39 80 ---------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFD 150 (392) T ss_pred ---------hhHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEec Confidence 34778999999999999999999999999999999999999999999999999999999888888877654 Q ss_pred C----eeEEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCc--CCHHHHHHH Q lcl|Aclame:pro 157 G----KAIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAF--LDEKPKENV 229 (416) Q Consensus 157 ~----~~~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~--~~~e~~~~~ 229 (416) + ....+++++|||+++++.++ ++|+||+..+..++....++.+++.++|+||++|++++++++. .++++.+++ T Consensus 151 ~~~~~~~~~~~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~~~~~ 230 (392) T protein:vir:39 151 DPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASR 230 (392) T ss_pred CcccceeEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchHHHHHHH Confidence 3 34679999999999988876 7899999999999999999999999999999999999999764 456677788 Q ss_pred HHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 RKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQ 309 (416) Q Consensus 230 ~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~ 309 (416) ++.+.+..++++++||++|++|++++.+++|++++|.+++++++||++|||||.+||+...+ ++.+++.++|+++||. T Consensus 231 ~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~--~~~~~~~~~f~~~~l~ 308 (392) T protein:vir:39 231 SRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ--QSSIQQISGMYASALN 308 (392) T ss_pred HHHHhccccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCc--ccHHHHHHHHHHHHHH Confidence 88888888999999999999999999999999999999999999999999999999975433 3456778899999999 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCCCCCeEeec Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELL---ERNPIENGDKYISS 386 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~---gl~p~~ggd~~~~~ 386 (416) |+++.|+++|+++|++. ++||...+.+.|...++..+.+++++|++|+||+|+++ |+.|. ++... T Consensus 309 P~~~~ie~~l~~~L~~~--------~~~d~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~g~~p~----e~r~~ 376 (392) T protein:vir:39 309 RYLRPAISELEYKLSDH--------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK----DLPAP 376 (392) T ss_pred HHHHHHHHHHHHhcccc--------ccccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHHhcCCCcc----ccchh Confidence 99999999999998753 67888888999999999999999999999999999987 44431 11111 Q ss_pred cCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 387 LNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 387 ~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) .|+-|+ .|||.++.= T Consensus 377 e~l~~~---------------~~Gd~~~p~ 391 (392) T protein:vir:39 377 ENTNKK---------------TTGQSNEPV 391 (392) T ss_pred cCCCCC---------------CCCCCCCCC Confidence 122121 112111111 No 65 >protein:vir:4995 Length: 384 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049969;genbank:gi:9632941;genbank:GeneID:1262104 Probab=100.00 E-value=1.2e-78 Score=447.75 Aligned_cols=370 Identities=19% Similarity=0.255 Sum_probs=314.3 Q ss_pred Ccch-hhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLLE-RMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) |.|. ++++.+.........+.+.....+.+ .+.++..++.+.|+++++|++||++||+++|++||++++... T Consensus 1 Mglf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~al~~~~V~~~i~~Ia~~ia~l~~~~~~~~~------ 73 (384) T protein:vir:49 1 MPIFNITNLATESPPSNQDSFFDITDPEFLD-ALNGSEWVSAETALKNSDLFSIISQLSNDLATAKITTSRKQL------ 73 (384) T ss_pred CccccccccCcccccccchhhccccchhhcc-cccCCceechhhhhccHHHHHHHHHHHHHHhhCceeeecchh------ Confidence 8875 34444443333333222222222222 345677889999999999999999999999999999986432 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeC--- Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLN--- 156 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~--- 156 (416) ..|+.+||++||+++||+.++.+++++||+|+++.|+..|++.+|+|++|++|++..+.+++.++|.+... T Consensus 74 ------~~l~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~~~ 147 (384) T protein:vir:49 74 ------QGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNQNGLYYNITFDDPR 147 (384) T ss_pred ------hhhhhccCCCCCHHHHHHHHHHHhhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEecCcc Confidence 34789999999999999999999999999999999999999999999999999999988888887777543 Q ss_pred -CeeEEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHH-HHHHHHH Q lcl|Aclame:pro 157 -GKAIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPK-ENVRKEW 233 (416) Q Consensus 157 -~~~~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~-~~~~~~~ 233 (416) +..+.+++++|||+++++.++ ++|+||+.++..++....++.+++.++|+||++|+++++.++..++++. +++++.. T Consensus 148 ~~~~~~~~~~eVih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~ 227 (384) T protein:vir:49 148 IPPKQHVPQGDILHFRLLSVDGGLTSVSPLMALGRELNIQKASDKLTLNALKNALNANGILKIKGGGLLDFKTKQSRSRQ 227 (384) T ss_pred ccceeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCChHHHHHHHHHHH Confidence 345789999999999887765 8999999999999999999999999999999999999999988775554 4455555 Q ss_pred HHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC--CCcccHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 234 KRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK--ATFSNIEHQSIEYVRNTLQPW 311 (416) Q Consensus 234 ~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~--~~~s~~e~~~~~f~~~~l~P~ 311 (416) ....++++++|+++|++|++++++++|+|++|.+++++++||++|||||.+||.... +++++.+++...|++.+|.|+ T Consensus 228 ~~~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~~~~~~~~~~~i~~~l~pi 307 (384) T protein:vir:49 228 AMKQMQGGPLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESVVGGEGDKQSSLEMIYNIYFKAVSRFLRPF 307 (384) T ss_pred hcccCCccceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCccccHHHHHHHHHHHHHHHHHHH Confidence 667788999999999999999999999999999999999999999999999997543 356788899999999999999 Q ss_pred HHHHHHHHHHhhc---CchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC--eEe Q lcl|Aclame:pro 312 IVNFEQELNVKLF---LDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD--KYI 384 (416) Q Consensus 312 ~~~i~~~l~~~l~---~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd--~~~ 384 (416) +..|+++|++++. .......+.+++|+++.+++.+..++.++...+...|+++ ||+|+.+|++|+|||| +.| T Consensus 308 ~~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~e~~~~l~~~g~~~-ne~r~~~~~~p~~gGd~~~~~ 384 (384) T protein:vir:49 308 VSELSKKLSCEVDADILPAVDPTGSNYIGLINSMVKTGTLAQNQGLYVLQQAEILP-KDLPEGETDSTLKGGETNEQY 384 (384) T ss_pred HHHHHHHhchhhhhhhhhhhhccchHHHHHHHHHhhcCcccHHHHHHHHhhCCCCC-hhHHHHcCCCCCCCCCCCCCC Confidence 9999999999873 3334455788999999999999999999999999999987 9999999999999975 455 No 66 >protein:vir:94002 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1487 # MgeName: jj50 # Cross-refs: genbank:acc:YP_764318;genbank:gi:115315632;genbank:GeneID:5176589 Probab=100.00 E-value=1e-78 Score=448.12 Aligned_cols=359 Identities=16% Similarity=0.173 Sum_probs=287.8 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcc---- Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI---- 76 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~---- 76 (416) |.|.+-....+........ ...+ .......++..++|++||++||++||++|+++++..+++. T Consensus 1 Mg~f~~~~~~~~~~~~~~~----------~~~~---~~~~~~~~~~~~~v~~~v~~IA~~iA~lp~~~~~~~~~~~~~~~ 67 (378) T protein:vir:94 1 MNLFGKVVSFSRGKLNNDT----------QRVT---AWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGSDT 67 (378) T ss_pred CCccccchhcccccccCCc----------ceee---eeccchhHHHHHHHHHHHHHHHhhhhhCceeeEEEcccCccccc Confidence 8766433211111111100 0000 0112334567889999999999999999999988765432 Q ss_pred -eeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec-CCCcEEEEEeeccceEEEEEcCCCcEEEEEEe Q lcl|Aclame:pro 77 -ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG-SHGYPEALFPLRPDYTNAYVHPTTGMLWYQTV 154 (416) Q Consensus 77 -~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~-~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 154 (416) ....+|+++++|+.+||++||+++||+.++.+++++||+|++++++ ..|++..++|. T Consensus 68 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~~~~~g~~~~l~p~--------------------- 126 (378) T protein:vir:94 68 LISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLSAPYVDLYAVFDDNTGELLDLLFA--------------------- 126 (378) T ss_pred ccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeeCCCceEEEEEec--------------------- Confidence 3456799999999999999999999999999999999999997654 44666666542 Q ss_pred eCCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 155 LNGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK 234 (416) Q Consensus 155 ~~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~ 234 (416) +..+++++++|||++++ .++..|+||++.+..++... +++ +.++|+++.++.+++++.++++++|+ T Consensus 127 --~~~~~~~~~diiH~~~~-~~~~~g~s~l~~~~~~i~~~----------~~~-~~~~gil~~~~~l~~~~~~~~~~~~~ 192 (378) T protein:vir:94 127 --DDKKEYKPEELVRLTSP-FYINEDTSILDNALASIQTK----------LEQ-GKLRGLLKINAFLDIDNTQEYREKAL 192 (378) T ss_pred --CCeeEeeeeeeEEecCc-CCccchhHHHHHHHHHHHHH----------Hhc-ccccceeeeCCcCCHHHHHHHHHHHH Confidence 12346788999999975 46678999999888876532 334 46899999999999888777777665 Q ss_pred Hhh-------cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHH Q lcl|Aclame:pro 235 RVN-------KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNT 307 (416) Q Consensus 235 ~~~-------~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~ 307 (416) +.. ++++++||++|++|++++++++++++ +.+++++++||++|||||.+|+ + +++|++..+|+++| T Consensus 193 ~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVP~~~l~----~--~~se~~~~~f~~~t 265 (378) T protein:vir:94 193 TTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILL----G--TASQEQQIYFYNST 265 (378) T ss_pred HHHHHhhcccccccceecCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhc----C--ChHHHHHHHHHHHH Confidence 432 45789999999999999999999996 6779999999999999999995 2 34478999999999 Q ss_pred HHHHHHHHHHHHHHhhcCchhccccc------chhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Q lcl|Aclame:pro 308 LQPWIVNFEQELNVKLFLDHDQKSGH------YVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD 381 (416) Q Consensus 308 l~P~~~~i~~~l~~~l~~~~~~~~~~------~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd 381 (416) |.|++++||++|+++||++.++..++ .++||.+.+++.|.+++++.+.+++++|+||+||+|+++||||+|||| T Consensus 266 L~P~~~~ie~~l~~~Ll~~~er~~g~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~gGD 345 (378) T protein:vir:94 266 IIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGEQPIEGGD 345 (378) T ss_pred HHHHHHHHHHHHHhhcCChhHhhhhhhcccccceeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Confidence 99999999999999999988776554 378999999999999999999999999999999999999999999999 Q ss_pred eEeeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 382 KYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 382 ~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) ++++|+|++|++.+++.+..++ +..+++|++|| T Consensus 346 ~~~~~~n~~~~~~~~~~~~~~~-~~~~~~e~~n~ 378 (378) T protein:vir:94 346 VYIANLNAVAVKNLSDLQGSRK-DVTSTDETNNQ 378 (378) T ss_pred eeeecccccccccchhhcCCcC-CCCCCCCCCCC Confidence 9999999999998887665544 44667888888 No 67 >protein:vir:1082 Length: 359 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:21 # MgeName: bIL309 # Cross-refs: genbank:acc:NP_076736;genbank:gi:13095846;genbank:GeneID:920394 Probab=100.00 E-value=9.2e-78 Score=442.94 Aligned_cols=348 Identities=19% Similarity=0.303 Sum_probs=290.2 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.|.+.|++|+..... +.+.....++.+.++..|+.+.|+++++|++||++||++||++|+. T Consensus 1 M~~~~~f~~r~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~al~~~av~~cv~~ia~~ia~~p~~------------- 62 (359) T protein:vir:10 1 MSILNPFERRSSITPN-----NYYPFMVQNGSIVPNSLVDATEALKNSDLYAVTSLISSDIAGTRFI------------- 62 (359) T ss_pred CcccchhhccccCCCC-----cchhhhhccccccCCcccCHHHhhcchHHHHHHHHHHHhhhcCccc------------- Confidence 9999989887643322 1233334455677888899999999999999999999999999983 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCeeE Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKAI 160 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~ 160 (416) +|+.+++|+.+||++||+++||+.++.+++++||+|++++|+..|++.+|+|++|+.|++..++++..+.+....++..+ T Consensus 63 ~~~~~~~L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~g~~~~l~~l~~~~v~i~~~~~~~~y~~~~~~~~~~~ 142 (359) T protein:vir:10 63 GNQVFTSVLNNPSHLTNAFSFWQTAILNLLLNGNVFLAILKGDNSLMKELRLIPSNAITIDLTDDTLTYEVNQFDDYPSA 142 (359) T ss_pred cchHHHHHhhcccccCCHHHHHHHHHHhccccCceEEEEEECCCCeEEEEEEeCCceEEEEEcCCeEEEEEEecCCceEE Confidence 46788999999999999999999999999999999999999999999999999999999977654322222223456678 Q ss_pred EechhheeeeccCCC-----CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC-cCCHHHHHHHHHHHH Q lcl|Aclame:pro 161 ELYDYEVLHFKGLST-----DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA-FLDEKPKENVRKEWK 234 (416) Q Consensus 161 ~~~~~~vih~~~~~~-----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~-~~~~e~~~~~~~~~~ 234 (416) .++++||||+++++. ++++|+||+..+..++....+++++..++|+||++|+++++.++ .+++++.+++++.|+ T Consensus 143 ~~~~~evih~~~~~~~~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e~~~~~~~~~~ 222 (359) T protein:vir:10 143 KYNASEMIHVKIMAYGVDTLHNLVGHSPLESLTSEIGQQKEANRLSLSTLKGALNPTSVVKVPQGTLSSEAKDSIRKEFE 222 (359) T ss_pred EEcccceEEeccCCCCCCccCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHHHHHHH Confidence 899999999997653 67899999999999999999999999999999999999999975 789999999999998 Q ss_pred Hhh---cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC--CCcccHHHHHHHHHHHHHH Q lcl|Aclame:pro 235 RVN---KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK--ATFSNIEHQSIEYVRNTLQ 309 (416) Q Consensus 235 ~~~---~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~--~~~s~~e~~~~~f~~~~l~ 309 (416) +.. |+|+++||++|++|++++++++|+|++|.+++++++||++|||||.+||..++ +++++.+++...|+..+|. T Consensus 223 ~~~~~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~~~e~~~~~~l~~~l~ 302 (359) T protein:vir:10 223 KANGGNNSGRVMVLDQSADFSTVSINADVANYLNSMNWGRTQIAKAFGVSDSYLNGTGDQQSSLDQIKDLYVNALNRFIE 302 (359) T ss_pred HHhCccccCCceecCCCcceeeecCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCcccccHHHHHHHHHHHHHHHHH Confidence 664 55789999999999999999999999999999999999999999999987654 3566777777777777777 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIE 378 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ 378 (416) |+...|+..|++++. ++...+...|.......+.+++++|+||+||+|+++|+||+= T Consensus 303 p~~~~l~~~l~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~G~~t~NE~R~~l~~~pv~ 359 (359) T protein:vir:10 303 PLISELRIKCDSSIG------------VDMSPITDYSNSVFKADILNWVKEGIIEPTEAKTLLESKGII 359 (359) T ss_pred HHHHHHHHHhhhhhc------------ccchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 777777776665542 223333333444445567789999999999999999999985 No 68 >protein:vir:93867 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1479 # MgeName: 712 # Cross-refs: genbank:acc:YP_764264;genbank:gi:115315577;genbank:GeneID:5141561 Probab=100.00 E-value=3.2e-78 Score=445.43 Aligned_cols=359 Identities=16% Similarity=0.168 Sum_probs=288.5 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcc---- Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI---- 76 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~---- 76 (416) |.|.+-+...+........ ...+ .......+++.++|++||++||++||++||++++.++++. T Consensus 1 Mg~f~~~~~f~~~~~~~~~----------~~~~---~~~~~~~~~~~~~v~~~i~~Ia~~iA~lp~~~~~~~~~~~~~~~ 67 (378) T protein:vir:93 1 MNLFGKVVSFSRGKLNNDT----------QRVT---AWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGSDT 67 (378) T ss_pred CccchhhhhhhccccCCCc----------ceee---ecccchhHHHHHHHHHHHHHHHhhhhhCceeeEEEccccccccc Confidence 8766544322111111000 0000 1122334678889999999999999999999998776543 Q ss_pred -eeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC-CcEEEEEeeccceEEEEEcCCCcEEEEEEe Q lcl|Aclame:pro 77 -ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH-GYPEALFPLRPDYTNAYVHPTTGMLWYQTV 154 (416) Q Consensus 77 -~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~-g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 154 (416) .+..+|+++++|+.+||++||+++||+.++.+++++||+|+++.++.. |++..++|. T Consensus 68 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~i~~~~~~~~g~~~~l~~~--------------------- 126 (378) T protein:vir:93 68 LISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFA--------------------- 126 (378) T ss_pred ccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEec--------------------- Confidence 234679999999999999999999999999999999999999877643 555555432 Q ss_pred eCCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 155 LNGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK 234 (416) Q Consensus 155 ~~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~ 234 (416) +..+++++++|||+|++ .++..|.|++..+...+. ++++++ .++|+++.++.+++++.++++++|+ T Consensus 127 --~~~~~~~~~diih~r~~-~~~~~~~s~l~~~~~~i~----------~~~~~~-~~~g~l~~~~~l~~~~~~~~~~~~~ 192 (378) T protein:vir:93 127 --DDKKEYKTEELVRLTSP-FYINEDTSILDNALASIQ----------TKLEQG-KLRGLLKINAFLDIDNTQEYREKAL 192 (378) T ss_pred --CCeeEeccceeEEecCc-cccchhhHHHHHHHHHHH----------HHHhcC-cccceeeeCCcCCHHHHHHHHHHHH Confidence 23456889999999964 456678898887776653 344555 6899999999999888777777666 Q ss_pred Hhh-------cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHH Q lcl|Aclame:pro 235 RVN-------KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNT 307 (416) Q Consensus 235 ~~~-------~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~ 307 (416) +.. +++++++|++|++|++++.+++++++ +.+++++++||++|||||.+|+. ++.|++..+|+++| T Consensus 193 ~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~g------~~~e~~~~~f~~~t 265 (378) T protein:vir:93 193 TTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG------TATQEQQIYFYNST 265 (378) T ss_pred HHHHHhhcccccccceEcCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC------CcHHHHHHHHHHHH Confidence 542 45689999999999999999999997 77789999999999999999952 34588999999999 Q ss_pred HHHHHHHHHHHHHHhhcCchhccccc------chhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Q lcl|Aclame:pro 308 LQPWIVNFEQELNVKLFLDHDQKSGH------YVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD 381 (416) Q Consensus 308 l~P~~~~i~~~l~~~l~~~~~~~~~~------~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd 381 (416) |.|++++||++||++||++.++..++ +++||++.+++.|.+++++++.+++++|+||+||+|+++|+||+|||| T Consensus 266 l~P~~~~ie~~l~~kLl~~~er~~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~~ggD 345 (378) T protein:vir:93 266 IIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGEQPIEGGD 345 (378) T ss_pred HHHHHHHHHHHHHhhcCChhHhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Confidence 99999999999999999988776554 488999999999999999999999999999999999999999999999 Q ss_pred eEeeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 382 KYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 382 ~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) ++++|+|++|++.+++.+..++ +..+++|++|| T Consensus 346 ~~~~~~n~~~~~~~~~~~~~~~-~~~~~~e~~n~ 378 (378) T protein:vir:93 346 VYIANLNAVAVKNLSDLQGSRK-DVTSTDETNNQ 378 (378) T ss_pred eeeeccccccccchhhhcCccC-CCCCCCCCCCC Confidence 9999999999999887766554 44567788888 No 69 >protein:vir:80644 Length: 551 # NCBI annotation: gp23 # Family: family:all:2446 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468463;genbank:gi:157325038;genbank:GeneID:5601615 Probab=100.00 E-value=2.1e-77 Score=440.95 Aligned_cols=409 Identities=11% Similarity=0.097 Sum_probs=298.3 Q ss_pred Ccchhh----hcc--ccccccccccchhHHHhhhcCccc-c-ccc-----cccHHHHhccHHHHHHHHHHHHhhccC--- Q lcl|Aclame:pro 1 MLLERM----FEK--RSGSSDHEDGFNNILLNMFGGRKT-A-SGE-----RVSESNSLVQPDIFACVNVLSDDIAKL--- 64 (416) Q Consensus 1 m~~~~~----f~~--~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~-----~~~~~~a~~~~~v~~~i~~ia~~ia~~--- 64 (416) +.+.++ .+| +...+........ ..-+.++.. . +.. ....+.+..+|+|++||+.||+.||++ T Consensus 33 ~~~~~~~~~~~~k~~~~~~~a~~~~~~~--~~~~~~~~~~r~~~~~~~~l~~~~~~~~~npiv~~~I~~ia~~IA~~~~~ 110 (551) T protein:vir:80 33 IAIQQREQEQISKAMNNKEVAYSQPVIG--SMSANPGFKTKPSIRNNQDLHGVLKKFGGNIILNAIINTRSNQVSMYCKP 110 (551) T ss_pred eecccccHHHHHHhhccCcceeeccccc--ceecCcccccCccccChhHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhhh Confidence 111111 111 1111111010000 001111111 1 111 111245667899999999999999984 Q ss_pred --------cceEEeecCCcce---eeeccchhhhhccccccc-----cCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEE Q lcl|Aclame:pro 65 --------PIHTYKRTDGGIE---RKPEHKSAHAVYARPNPY-----MTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPE 128 (416) Q Consensus 65 --------~~~~~~~~~~~~~---~~~~~~~~~~l~~~PN~~-----~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~ 128 (416) +|.+...+.+... ..........++.+||++ +|+.+|+++++.+++++||+|++++|+..|+|. T Consensus 111 ~~~~~~g~~~~i~~kd~~~~~~~~~~~~~~~i~~~l~~pn~~~~p~~~s~~~f~~~lv~dlll~Gnay~~i~rd~~G~~~ 190 (551) T protein:vir:80 111 ARHSEKGVGFEVRLKDLDKKPTSHDEATIKRIESFIEKTGVDNDINRDSFSSFVKKIVRDTYMYDQVNFEKVFNRNQSMV 190 (551) T ss_pred hhhhcCCCCceEEecccCcccChhHHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHhcCCEEEEEEECCCCcEE Confidence 4444322211110 000112234456789887 488999999999999999999999999999999 Q ss_pred EEEeeccceEEEEEcCCCcE-----EEEEEeeCCeeEEechhheeeeccCCC----CccccccHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 129 ALFPLRPDYTNAYVHPTTGM-----LWYQTVLNGKAIELYDYEVLHFKGLST----DGIHGKSPIGVVREHIGAQAAATK 199 (416) Q Consensus 129 ~l~~l~p~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~vih~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~ 199 (416) +||||+|++|++..+.++.. .|+++..++..+.|++++|||+++++. .+.+|+||+..+..++....++.+ T Consensus 191 ~L~~l~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~eiiH~~~n~~~~~~~~~~G~spi~~a~~~i~~~~a~~~ 270 (551) T protein:vir:80 191 RFVAKDPTTIFFATTADGKIPDNGNRFVQVIDQKIVATFNAREMAFAVRNPRSDIYATGYGYPELEIALKQFIAHENTEA 270 (551) T ss_pred EEEEeCCceeEEEECCccccccCceEEEEEeCCcEEEEEcccceEEecccCCCCcccccccccHHHHHHHHHHHHHHHHH Confidence 99999999999998887743 445555555677899999999997543 256899999999999999999999 Q ss_pred HHHHHHhccCCcceeeccCC--cCCHHHHHHHHHHHHHhh----cCCceeec-CCCceeEeccCChhhHHHHHHHHHHHH Q lcl|Aclame:pro 200 YNAKLYKNEATPRGILKVPA--FLDEKPKENVRKEWKRVN----KVENIAII-DYGLEYQSISMPLQEAQFVESMKFNKA 272 (416) Q Consensus 200 ~~~~~~~n~~~~~~v~~~~~--~~~~e~~~~~~~~~~~~~----~~~~~~vl-~~g~~~~~~~~~~~d~~~~e~~~~~~~ 272 (416) ++.++|+||++|+++|++++ .+++++.+++++.|+..+ ++|+++|+ ++|++|++++++++|++|+|+++++++ T Consensus 271 ~~~~~f~Ng~~p~giL~~~~~~~lt~e~~~~lk~~~~~~~~G~~nag~~~vl~~~g~~~~~l~~~~~D~qfle~~~~~~~ 350 (551) T protein:vir:80 271 FNDRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVVSAEDVKFVNMTPSARDMEFEKWLNYLIN 350 (551) T ss_pred HHHHHHHcCCCcceEEEEcCCCCCCHHHHHHHHHHHHHHhcCccccCccccccCCCceEEEccCChhHHHHHHHHHHHHH Confidence 99999999999999998754 489999999999998764 66787666 689999999999999999999999999 Q ss_pred HHHHHhccchhhcccccCC----------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhh Q lcl|Aclame:pro 273 QISMIYKVPLHKLNELDKA----------TFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSE 342 (416) Q Consensus 273 ~Ia~~~gvp~~~lg~~~~~----------~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l 342 (416) +||++|||||.+||..+.+ |++|+|++...|++.||+|++..||++||++|++..+ ..+.|+++.+ T Consensus 351 ~Ia~aFgVPp~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~----~~~~f~f~~~ 426 (551) T protein:vir:80 351 VISALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGFIEDFINKHIVAEFG----DKYTFQFVGG 426 (551) T ss_pred HHHHHhcCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccC----CceEEEeecc Confidence 9999999999999975543 7899999999999999999999999999999997643 2356666777 Q ss_pred hhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC-CCCCCeEeeccCccccccccccccc-------------------c Q lcl|Aclame:pro 343 LRGDSKTQAEYLKTLHETGVLNKDEIRELLERNP-IENGDKYISSLNYVFLDFLEEYQRL-------------------K 402 (416) Q Consensus 343 ~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p-~~ggd~~~~~~n~~~~~~~~~~~~~-------------------~ 402 (416) ...+..++++.++ ++.+|+||+||+|+++|||| +||||+++.|.++.+++.....+.. . T Consensus 427 ~~~~~~~~~~~~~-~~~~g~lT~NE~R~~~gl~P~~egGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (551) T protein:vir:80 427 DIKSELESVKILA-EKAKVAMTVNEVRKELNLPGDVIGGDIPLNGVIVQRIGQLMQQEQFEHEKQQSNLQMLQEQTGNRV 505 (551) T ss_pred ChhhHHHHHHHHH-HHhcCCcCHHHHHHHhCCCCCCCCCceeecccccccccccccccCcchhhhhhccccccCcCCCCC Confidence 7788887777654 66789999999999999998 7999999999988876543322110 0 Q ss_pred CCc-ccC------CCCccCCC Q lcl|Aclame:pro 403 AGG-AMK------GGDNKNEG 416 (416) Q Consensus 403 ~~~-~~~------gge~~~~~ 416 (416) .++ +.+ .|+++.+| T Consensus 506 ~~~~~~~p~~~~~~~~~~~~~ 526 (551) T protein:vir:80 506 STDVEDIPDGKDTTGDIGKDG 526 (551) T ss_pred CCCCCCCCCccccCCCccccc Confidence 000 000 11111111 No 70 >protein:vir:4089 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:86 # MgeName: 2389 # Cross-refs: genbank:acc:NP_510984;swissprot:trembl:q8w606;genbank:gi:17488506;uniprot:Q8W606;genbank:GeneID:1260314 Probab=100.00 E-value=1.7e-77 Score=441.41 Aligned_cols=379 Identities=16% Similarity=0.120 Sum_probs=286.8 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.|..+|..+-..........+. ........++.+.|+++++|++||++||+++|++||++++.+ ... T Consensus 1 Mg~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~v~~~v~~Ia~~ia~~p~~~~~~~-----~~~ 68 (395) T protein:vir:40 1 MGFKSWVSGFFNEEQRTLNLTDT-------VWCSIPSEKLKELSIKKWAIDSCANKIANTLSCAEVLTYEKG-----EEV 68 (395) T ss_pred CchHHHHHhhhcccccccccccc-------hhhccccccchhhhhhhHHHHHHHHHHHHHHhhCceeeccCC-----ccc Confidence 88866665443222111111111 111233456678899999999999999999999999998743 235 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCC--e Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNG--K 158 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~--~ 158 (416) +|+++++|+.+||++||+++||+.++.+++++||||+++.++.. ++.+. +...........++.+...+ . T Consensus 69 ~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~v~~~~~~~ 140 (395) T protein:vir:40 69 RKKNWYMFNVEANQNQNATEFWKKAIYKLVYDNEALIFMQDEYI------YVADS--FTKNDKSLYENTYTEVTLKDLTL 140 (395) T ss_pred cchHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEecCce------eecCC--ccccccccccceeeeeeecCcee Confidence 68999999999999999999999999999999999999987642 22221 11111111111222222222 2 Q ss_pred eEEechhheeeeccCCCCcc-ccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhh Q lcl|Aclame:pro 159 AIELYDYEVLHFKGLSTDGI-HGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVN 237 (416) Q Consensus 159 ~~~~~~~~vih~~~~~~~~~-~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~ 237 (416) .+.+++++|||+|+.+..+. .+.+....+...+... .....+.++.++.++++.+...++++.+++++.|++.. T Consensus 141 ~~~~~~~evih~r~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 215 (395) T protein:vir:40 141 KKEFKESEVLHLTLNNESIKSIIDGFYLLYGDLLTAA-----VNKYKKLNSRKIIVKLKAMFGQTPEAEEKLRLMLSERM 215 (395) T ss_pred eeeeccccEEEeecCCCCccccchhHHHHHHHHHHHH-----HHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHH Confidence 45789999999997654432 2223333333333222 22233455556666677788899999999999887653 Q ss_pred -----cCCceeecCCCceeEeccCChhhHHHHHHHHHHH---HHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHH Q lcl|Aclame:pro 238 -----KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNK---AQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQ 309 (416) Q Consensus 238 -----~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~---~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~ 309 (416) ++++++|+++|++|+++++++++++++|.++++. ++||++|||||.+|+ ++++|.|++...|+++||. T Consensus 216 ~~~~~~~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~Ia~~fgVPp~~l~----~~~sn~e~~~~~f~~~~L~ 291 (395) T protein:vir:40 216 KKFLAEGDSALPVEDGMEIDELAGDSKIAESRDIKKMIDDVFEMVANSFNIPLGLAK----GDTVGLSEQVNSFLMFSIN 291 (395) T ss_pred HHhhccCCceeecCCCceEEeccCChhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCCcCHHHHHHHHHHHHHH Confidence 5667999999999999999999999999999875 799999999999996 6789999999999999999 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeecc Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSL 387 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~ 387 (416) |++++||++|+++||++.++..+++++||++.+++.|.+++++++.+++++|+||+||+|+++|+||+++ ||++++|+ T Consensus 292 P~~~~ie~~l~~kLl~~~~~~~g~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~~~~gD~~~~~~ 371 (395) T protein:vir:40 292 PIAEMFTDEGNRKFYGRDSVLERTYMKLDTTRIKVQDIQEIASSMDVLFHIGVNTIDDNLRMIGREPVMSPETQERFVTK 371 (395) T ss_pred HHHHHHHHHHHHhcCChhhhcCCceEEEechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCCCCceeeecc Confidence 9999999999999999999988999999999999999999999999999999999999999999999954 99999999 Q ss_pred CccccccccccccccCCcccCCCCcc-CCC Q lcl|Aclame:pro 388 NYVFLDFLEEYQRLKAGGAMKGGDNK-NEG 416 (416) Q Consensus 388 n~~~~~~~~~~~~~~~~~~~~gge~~-~~~ 416 (416) |++|++...+. .+|||++ ++| T Consensus 372 n~~~~~~~~~~--------~kgge~~~~~~ 393 (395) T protein:vir:40 372 NYAPLGENEED--------LKGGDINENKG 393 (395) T ss_pred ccccccccccc--------cCCCCCCCCcC Confidence 99999865432 2344433 333 No 71 >protein:vir:1661 Length: 378 # NCBI annotation: unknown # Family: family:all:2379 # MgeID: mge:34 # MgeName: sk1 # Cross-refs: genbank:acc:NP_044950;genbank:gi:9629657;genbank:GeneID:1261302 Probab=100.00 E-value=1.3e-77 Score=442.16 Aligned_cols=359 Identities=16% Similarity=0.170 Sum_probs=286.7 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcce--- Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIE--- 77 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~--- 77 (416) |.|.+-+...+....... ....+ .......+++.++|++||++||++||++||++++.+++++. T Consensus 1 Mg~f~~~~~~~~~~~~~~----------~~~~~---~~~~~~~~~~~~~v~~~i~~Ia~~iA~l~~~~~~~~~~~~~~~~ 67 (378) T protein:vir:16 1 MNLFGKVVSFSRGKLNND----------TQRVT---AWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGSDT 67 (378) T ss_pred CccchhhhhhhcccccCC----------cceee---ecccchhhHHHHHHHHHHHHHHhhhhhCceeEEEEccccccccc Confidence 776644331111111100 00000 11223346788899999999999999999999987765432 Q ss_pred --eeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC-CcEEEEEeeccceEEEEEcCCCcEEEEEEe Q lcl|Aclame:pro 78 --RKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH-GYPEALFPLRPDYTNAYVHPTTGMLWYQTV 154 (416) Q Consensus 78 --~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~-g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 154 (416) +..+|+++++|+.+||++||+++||+.++.+++++||+|++++|+.. |++..++|. T Consensus 68 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~d~~~g~~~~l~~~--------------------- 126 (378) T protein:vir:16 68 LISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFA--------------------- 126 (378) T ss_pred ccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEec--------------------- Confidence 34579999999999999999999999999999999999999988754 555544432 Q ss_pred eCCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 155 LNGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK 234 (416) Q Consensus 155 ~~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~ 234 (416) +..+.+++++|||+|++ .++..|.|++..+...+. ..+. ++.++++++.++.+++++.++++++|+ T Consensus 127 --~~~~~~~~~diih~r~~-~~~~~~~s~l~~~~~~i~----------~~~~-~~~~~g~l~~~~~l~~~~~~~~~~~~~ 192 (378) T protein:vir:16 127 --DDKKEYKPEELVRLTSP-FYINEDTSILDNALASIQ----------TKLE-QGKLRGLLKINAFLDIDNTQEYREKAL 192 (378) T ss_pred --CCeeEecccceEEecCc-cCccchhHHHHHHHHHHH----------HHHh-cCccceeeEeCCcCCHHHHHHHHHHHH Confidence 22356788999999964 456678888888876654 2333 446899999999999888777777666 Q ss_pred Hhh-------cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHH Q lcl|Aclame:pro 235 RVN-------KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNT 307 (416) Q Consensus 235 ~~~-------~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~ 307 (416) +.. ++++++||++|++|++++++++++++ +.+++++++||++|||||.+|+. ++.|++..+|+.+| T Consensus 193 ~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~g------~~~e~~~~~f~~~t 265 (378) T protein:vir:16 193 TTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG------TASQEQQIYFYNST 265 (378) T ss_pred HHHHHhhcccccccceEcCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC------CchHHHHHHHHHHH Confidence 542 45789999999999999999999997 56689999999999999999952 34588999999999 Q ss_pred HHHHHHHHHHHHHHhhcCchhccccc------chhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Q lcl|Aclame:pro 308 LQPWIVNFEQELNVKLFLDHDQKSGH------YVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD 381 (416) Q Consensus 308 l~P~~~~i~~~l~~~l~~~~~~~~~~------~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd 381 (416) |.|++++||++|+++||++.++..++ .++|+.+.+++.|.+++++++.+++++|+||+||+|+++|+||+|||| T Consensus 266 l~P~~~~ie~~l~~kLl~~~e~~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~ggD 345 (378) T protein:vir:16 266 IIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGEQPIEGGD 345 (378) T ss_pred HHHHHHHHHHHHHhhcCChhhhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Confidence 99999999999999999987765543 478999999999999999999999999999999999999999999999 Q ss_pred eEeeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 382 KYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 382 ~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) ++++|+|++|++.+++.+..++ +..+|+|++|| T Consensus 346 ~~~~~~n~~~~~~~~~~~~~~~-~~~~~~e~~ne 378 (378) T protein:vir:16 346 VYIANLNAVAVKNLSDLQGSRK-DVTSTDETNNQ 378 (378) T ss_pred eEeeccccccccchhhhcCccC-CCCCCCCCCCC Confidence 9999999999998887655444 45678888888 No 72 >protein:vir:9641 Length: 395 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:173 # MgeName: 315.1 # Cross-refs: genbank:acc:NP_795403;genbank:gi:28876176;genbank:GeneID:1257709 Probab=100.00 E-value=1.1e-77 Score=442.58 Aligned_cols=374 Identities=14% Similarity=0.119 Sum_probs=291.3 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.|..+|+.+.........+.. . ...++.+.|+++++|++||++||+++|++||++++.++ .... T Consensus 1 Mgl~d~~~~~~~~~~~~~~~~~----~--------~~~~~~~~~l~~~~v~~~i~~Ia~~ia~lp~~v~~~~~---~~~~ 65 (395) T protein:vir:96 1 MGILDFFSFKKSGTLSDDDSGS----T--------TSEKLTNVVLKEDALYKCVNYLARIISKSTFRIKAPEK---LTEN 65 (395) T ss_pred CcchhhhcCCCCcccccccccc----c--------hhhhcchhhhhhHHHHHHHHHHHHhhccceeEEEeCCc---cccc Confidence 9888888765433322221111 1 12345678899999999999999999999999997543 3446 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEe--eCCe Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTV--LNGK 158 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~--~~~~ 158 (416) +|++.++|+.+||++||+++||+.++.+++++||+|+++.|+..+.+...++..... .+.. ++.+. .... T Consensus 66 ~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~v~~~~~~~ 137 (395) T protein:vir:96 66 QKDWLYWINTKANPNQSASQFWVEVVQKLLVDGETLIFVIPGKGIYVADAFTQDKKL-------SGNK-FKVSRVQGQTY 137 (395) T ss_pred cchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEcCCceecCCcccccccc-------ccce-eeeeeecccee Confidence 799999999999999999999999999999999999999998755444433322111 1111 11111 1122 Q ss_pred eEEechhheeeeccCCCCc-cccccHHHHHHHHHHHH------HHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHH Q lcl|Aclame:pro 159 AIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQ------AAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRK 231 (416) Q Consensus 159 ~~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~------~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~ 231 (416) ...+++++|||+|+++.+. .++.+++......+... ..+.++..+++.+++.|.++++.++...++..+++.+ T Consensus 138 ~~~~~~~dvih~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (395) T protein:vir:96 138 EKIFTFDQVIYLKNDNSDLMLKVESLWEEYGELLGHVINNQKIANQIRFTMTPPKDKVRERAQENSDGGRQPKSDKDFFK 217 (395) T ss_pred eeEeccCceEEecccCCccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhcccccccceeeccCchhhHHHHHHHHH Confidence 4578999999999876543 33444333333333332 3344678899999999999999998888777777766 Q ss_pred HHHHhhcC--CceeecCCCceeEeccCChhhHHHHHHHHHH------HHHHHHHhccchhhcccccCCCcccHHHHHHHH Q lcl|Aclame:pro 232 EWKRVNKV--ENIAIIDYGLEYQSISMPLQEAQFVESMKFN------KAQISMIYKVPLHKLNELDKATFSNIEHQSIEY 303 (416) Q Consensus 232 ~~~~~~~~--~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~------~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f 303 (416) .+.+..++ +.++++++|++|++++.++.|+|++|.+++. .++||++|||||.+|+ +++++.|++.++| T Consensus 218 ~~~~~~~~~~~~v~~l~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~~~eIa~~fgVPp~~l~----~~~sn~e~~~~~f 293 (395) T protein:vir:96 218 RTIEKIRTESVVGIPVTANTNYEEYGSKNTGSVKSYVDDIKKLKDQYMAEFAEMLGIPISLLH----GDIADNQKNYELL 293 (395) T ss_pred HHHHHhhcCCcceEEccCCceeEecccChhhhhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCCccHHHHHHHH Confidence 66655443 4477899999999999999999999988776 5899999999999996 6789999999999 Q ss_pred HHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CC Q lcl|Aclame:pro 304 VRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GD 381 (416) Q Consensus 304 ~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd 381 (416) +++||.|++.+||++|+++||++.++..+. +|+++.+++.|.+++++++.+++++|+||+||+|+++|+||+|| || T Consensus 294 ~~~~L~P~~~~ie~~l~~~Ll~~~e~~~~~--~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~pi~~~~gD 371 (395) T protein:vir:96 294 LEGPIESLITNIVDGLEYAIFDKSETLEGS--FIKVTGLKNYDLFSISSQADKLISSGFVFIDEVREEIGLPELPDGLGK 371 (395) T ss_pred HHHHHHHHHHHHHHHHHhhcCChhhhcCce--eEeecchhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCc Confidence 999999999999999999999988776664 46778999999999999999999999999999999999999976 99 Q ss_pred eEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 382 KYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 382 ~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ++++|+|++|+++ +|||++++. T Consensus 372 ~~~~~~N~~~~~~-------------~gge~~~~~ 393 (395) T protein:vir:96 372 VLYMTKNYESVLE-------------RGGEVDEEV 393 (395) T ss_pred eeeecccceechh-------------ccCCCCCCC Confidence 9999999998864 456665555 No 73 >protein:vir:4952 Length: 386 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049928;genbank:gi:9632899;genbank:GeneID:1262075 Probab=100.00 E-value=9e-77 Score=437.50 Aligned_cols=379 Identities=19% Similarity=0.250 Sum_probs=313.5 Q ss_pred Ccchhhhcc-ccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLLERMFEK-RSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) |.|.+..++ +.........+.+.+... ....+.++..++.+.|+++++|++||++||+++|++|+++++... T Consensus 1 M~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~~p~~~~~~~~------ 73 (386) T protein:vir:49 1 MPIFNITNLATESPPINQESFFDIADSD-FLASLNSSEWVSAENALKNSDLFSIISQLSNDLATAKITTSRKQL------ 73 (386) T ss_pred CchhhhhccCCCCcccchhhhhhhhhcc-ccccccCCceechhhhhccHHHHHHHHHHHHHhhhCceeeccchh------ Confidence 877655443 333223333232222222 223355678899999999999999999999999999999987432 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEee---- Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVL---- 155 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~---- 155 (416) ..|+.+||++||+++||+.++.+++++||||+++.|+..|++.+|+|++|+.|++..+.+++.++|.+.. T Consensus 74 ------~~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~l~~i~~~~v~v~~~~~~~~~~y~~~~~~~~ 147 (386) T protein:vir:49 74 ------QGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNDNGRDMKWEYLRPSQVSFNRLDNQNGLYYNITFDDPH 147 (386) T ss_pred ------hhhhhccCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEecCceeEEEEcCCCceEEEEEEEcCcc Confidence 3578999999999999999999999999999999999999999999999999999999988888777653 Q ss_pred CCeeEEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 156 NGKAIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK 234 (416) Q Consensus 156 ~~~~~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~ 234 (416) .+..+.+++++|||++++++++ ++|+|++.++..++....++.+++.++|+||++|+++++.++..++++.+++++.|. T Consensus 148 ~~~~~~~~~~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~ 227 (386) T protein:vir:49 148 IAPKQHVPQNDILHFRLLSVDGGLTSVSPLMALGREFNIQKASDKLTISALKNALNANGILKIKGGGLLDFKTKVSRSRQ 227 (386) T ss_pred ccceeEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEeCCCCChHHHHHHHHHHH Confidence 2456789999999999988766 899999999999999999999999999999999999999999999999999988886 Q ss_pred Hh-hcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 235 RV-NKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIV 313 (416) Q Consensus 235 ~~-~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~ 313 (416) .. .++|+++|+++|++|++++.+++|++++|.+++++++||++|||||.+||... .++++.+ +.+.|+..+|.|+++ T Consensus 228 ~~~~n~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~~~~~~~-~~~~~~~~~i~~~l~ 305 (386) T protein:vir:49 228 AMKQMQGGPLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESIVGGDG-DQQSSLE-MIYNIYFKSVSRYLR 305 (386) T ss_pred HhccCCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCC-CccchHH-HHHHHHHHHHHHHHH Confidence 54 57789999999999999999999999999999999999999999999998644 3455554 456899999999999 Q ss_pred HHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccc Q lcl|Aclame:pro 314 NFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLD 393 (416) Q Consensus 314 ~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~ 393 (416) .|+++|+++|++ +++|+.+.+++.|...++..+.+++++|++|+||+|++++..++...+... ..+ T Consensus 306 ~i~~~~~~~l~~--------~~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~~~~~~~~~~-~~~----- 371 (386) T protein:vir:49 306 PFVSEMSKKLSC--------EVDVDISPAVDPTGSNYISLINSMVKSGTLAQNQGLYILQQAEILPKELPD-GKN----- 371 (386) T ss_pred HHHHHHHHHhcc--------hhcccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhhCCCCCCcCcc-hhc----- Confidence 999999999864 478999999999999999999999999999999999999876653222111 000 Q ss_pred cccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 394 FLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 394 ~~~~~~~~~~~~~~~gge~~~~~ 416 (416) . .....+|||++++- T Consensus 372 -------~-~~~~~~gGd~~~~~ 386 (386) T protein:vir:49 372 -------P-NRTSLKGGEINEQD 386 (386) T ss_pred -------c-CCCCCCCCCCCCCC Confidence 0 01234566666555 No 74 >protein:vir:100691 Length: 535 # NCBI annotation: hypothetical protein # Family: family:all:2446 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164747;genbank:gi:56693160;genbank:GeneID:3197324 Probab=100.00 E-value=1.5e-76 Score=436.35 Aligned_cols=406 Identities=13% Similarity=0.092 Sum_probs=305.4 Q ss_pred Ccchh-hhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCc--ce Q lcl|Aclame:pro 1 MLLER-MFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG--IE 77 (416) Q Consensus 1 m~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~--~~ 77 (416) |.-+- .|+.+...+.. ..+.+ +...+...+. +....+.+....++++|+.++++.++++|+++++.+..+ +. T Consensus 53 ~~~~~~g~~~~~~~~~~-~~~~~-l~~~~~~~~~---~~~~i~t~~~~va~~~~i~~~s~~~~~~~i~l~~~~~~~~~~~ 127 (535) T protein:vir:10 53 ADGNVAGQYSVASISDV-LSTKK-LLKAYADNDI---VQAIIRTRTNQVLTYSNPSRYNRNGVGFKVELKDATKVMSKAQ 127 (535) T ss_pred ccCCcccccccCccccc-cCHHH-HHHHhccChh---HHHHHHHHHHHHHHHHHHHHHhcccCcceeEEEeccCCCcchh Confidence 33111 12222211111 12222 3333332211 112234566778899999999999999999999876543 33 Q ss_pred eeeccchhhhhccccccccCHHH----HHHHHHHHHHH-cCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC---cEE Q lcl|Aclame:pro 78 RKPEHKSAHAVYARPNPYMTAFT----WKKLMMTHVLT-WGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT---GML 149 (416) Q Consensus 78 ~~~~~~~~~~l~~~PN~~~s~~~----f~~~~~~~~l~-~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~---~~~ 149 (416) ....|++.++|+.+||++|++.+ |+++++.++++ .|++|++|.|+..|+|.+||||+|++|++..+.++ ... T Consensus 128 ~~~~~~l~~lL~~~PN~~~~~~~~~~~~~~~lv~d~l~~~g~ay~~i~r~~~G~~~~L~~l~p~~V~v~~d~~~~~~~~~ 207 (535) T protein:vir:10 128 IKRAHEIEDFIYNTGSEYYEWRDTFPRLLTKIINDMYVQDQINIERIFKNDSNELDHFNAVDASKVVISYSPRSKDQPRK 207 (535) T ss_pred hhhhhHHHHHHHhCCCCCCChhHHHHHHHHHHHHHHHhhCCceEEEEEECCCCcEEEEEEeCCceeEEEEcCccccCceE Confidence 44568888999999999998876 55566666555 46889999999999999999999999999887655 466 Q ss_pred EEEEeeCCeeEEechhheeeeccCCCC----ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC----cC Q lcl|Aclame:pro 150 WYQTVLNGKAIELYDYEVLHFKGLSTD----GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA----FL 221 (416) Q Consensus 150 ~~~~~~~~~~~~~~~~~vih~~~~~~~----~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~----~~ 221 (416) +|.+..++..+.+++++|||+++++.+ +.+|+||+..+..++....++++++.++|+||++|+++|+.++ .+ T Consensus 208 ~~~~~~~~~~~~~~~~eiih~~~~~~~~~~~~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~ng~~p~giL~~~~~~~~~l 287 (535) T protein:vir:10 208 FEQFVSETKSVKFSERNLTFINYWNLSDTDRRGYGYSPVEASIPLIRAIYDTEQFNARFFSQGGTTRGILVIDQDGDAQA 287 (535) T ss_pred EEEEecCceeEEECcccEEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCccc Confidence 777777777889999999999976543 5679999999999999999999999999999999999999875 47 Q ss_pred CHHHHHHHHHHHHHhh----cCCceeecC-CCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCccc- Q lcl|Aclame:pro 222 DEKPKENVRKEWKRVN----KVENIAIID-YGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSN- 295 (416) Q Consensus 222 ~~e~~~~~~~~~~~~~----~~~~~~vl~-~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~- 295 (416) ++++.+++++.|++.+ ++++++|+. +|++|++++++++|+||+|++++++++||++|||||.+||..+++||+| T Consensus 288 s~e~~e~lk~~~~~~~~G~~nag~~~vl~~~g~~~~~l~~~~~D~qfle~~~~~~~eIa~afgVPp~~lG~~~~at~sn~ 367 (535) T protein:vir:10 288 NQMMLAGIRRQWTSQGSGLGGAWKIPILAAKDAKFVNMTQNSRDMEFDKFLNFMIYDTAAIFQMQPEEINFPNNGGSTGK 367 (535) T ss_pred CHHHHHHHHHHHHHHhcCcccccccccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccccCcccccc Confidence 8999999999998764 557776665 7999999999999999999999999999999999999999998887754 Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcC Q lcl|Aclame:pro 296 -----------IEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLN 364 (416) Q Consensus 296 -----------~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t 364 (416) .|++...|++.||.|+++.||++||++|++..+ ..++|+++.+++.|.++++++++.+. +|+|| T Consensus 368 ~~~~~~~~~s~~E~~~~~~~~~~L~P~l~~ie~~ln~~Ll~~~~----~~~~f~f~~l~~~d~~~r~~~~~~~~-~g~lT 442 (535) T protein:vir:10 368 SGTKSVNEGSTAKAKLESSKDKGLTPLLSFIEQVINDKIMRYVD----TDYRFSFTLGDAQDKLQEEQVWKLKL-ANGYF 442 (535) T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccC----CeEEEEeccccccCHHHHHHHHHHHH-cCCCC Confidence 567778899999999999999999999997543 34678888999999999988887555 67899 Q ss_pred HHHHHHHhCCCCCCCCCeEeecc---CccccccccccccccC----Cc---------------ccCCCCccCCC Q lcl|Aclame:pro 365 KDEIRELLERNPIENGDKYISSL---NYVFLDFLEEYQRLKA----GG---------------AMKGGDNKNEG 416 (416) Q Consensus 365 ~NE~R~~~gl~p~~ggd~~~~~~---n~~~~~~~~~~~~~~~----~~---------------~~~gge~~~~~ 416 (416) +||+|+++||||+||||++++.. ++........+..+.. ++ ..++|.++.+- T Consensus 443 ~NE~R~~~gl~piegGD~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~q~~~~~~~~~~~g~~~~~~ 516 (535) T protein:vir:10 443 INEYRKDHGLKTVDGLDVPGFIGSAENFINATGFGQPNVPDSSDDSGSTLGERERQERIQHSKDYEKGKDDPKS 516 (535) T ss_pred HHHHHHHhCCCCCCCccccccccchhhcccccccccccCCCCCCCccccCCccccCcccccccccccCCCCCCC Confidence 99999999999999999876543 2221111100000000 00 00011111000 No 75 >protein:vir:78310 Length: 376 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1850 # MgeName: B025 # Cross-refs: genbank:acc:YP_001468642;genbank:gi:157325220;genbank:GeneID:5601655 Probab=100.00 E-value=3.9e-77 Score=439.50 Aligned_cols=361 Identities=16% Similarity=0.130 Sum_probs=287.0 Q ss_pred Ccc-hhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLL-ERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) |.| +++|+++........ ...+..++.+.|+++++|++||++||+++|++||++++.+ .. T Consensus 1 Mg~f~~l~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~~v~~~i~~Ia~~ia~~p~~~~~~~-----~~ 61 (376) T protein:vir:78 1 MGFFSELFKRNKEIEWMWD--------------LDFLEDKTTKVYLKKMALNTCVKHIARTIAKSDFRLKNGE-----TS 61 (376) T ss_pred CchhhhhhccCCccccccc--------------hhhccccchhhhhhhHHHHHHHHHHHHhhcccceeecccc-----cc Confidence 876 678887654322211 1123446778899999999999999999999999998642 45 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCee Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKA 159 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~ 159 (416) .+|+++++|+.+||++||+++||+.++.++++.||+|+++.|+..|.+.+++|+.+..+...... ... ....... T Consensus 62 ~~~~l~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~ 136 (376) T protein:vir:78 62 VRDKLYYKLNIRPNTDMSSSSFWEKVIYKLIYDNECLIVLSDTDDFLIADSYVRKEFAFFPDVFE--GVT---VKDYRYN 136 (376) T ss_pred ccchHHHHHhhccccCCCHHHHHHHHHHHHhHcCcEEEEEEeCCCeeeccceeecccceeeeeee--eee---eecceee Confidence 68999999999999999999999999999999999999999999999999999998766543211 111 1111224 Q ss_pred EEechhheeeeccCCCCccccccHH-HHHHHHHHHHHHHHHHHHHH-HhccCCcceeeccCCcCCHHHHHHHHHHHHHhh Q lcl|Aclame:pro 160 IELYDYEVLHFKGLSTDGIHGKSPI-GVVREHIGAQAAATKYNAKL-YKNEATPRGILKVPAFLDEKPKENVRKEWKRVN 237 (416) Q Consensus 160 ~~~~~~~vih~~~~~~~~~~G~s~~-~~~~~~i~~~~~~~~~~~~~-~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~ 237 (416) ..+++++|||+++...++....+++ ..+...+ ......+ +.++.++.++++.++.+++++.+++++.|++.+ T Consensus 137 ~~~~~~evih~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 210 (376) T protein:vir:78 137 RNFSMDDVIFLEYGNERLSAFTDGMFEDYGELF------GKMIRAQMRNFQIRGAVNFKMAGVADKDKQTKLQEYIDKVY 210 (376) T ss_pred eeeccccEEEeccCCCCchhhhhHHHHHHHHHH------HHHHHHHHhcCCCceeEEEccCCCCCHHHHHHHHHHHHHHh Confidence 5789999999997665433222222 2222222 1222233 344555556677788899999999999998775 Q ss_pred c-----CCceeecCCCceeEeccCChhh-----HHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHH Q lcl|Aclame:pro 238 K-----VENIAIIDYGLEYQSISMPLQE-----AQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNT 307 (416) Q Consensus 238 ~-----~~~~~vl~~g~~~~~~~~~~~d-----~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~ 307 (416) + ++.++++++|++|+++++++.+ +|++|.+++++++||++|||||.+|| ++++|.|++.+.|+++| T Consensus 211 ~g~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVPp~~l~----~~~s~~e~~~~~f~~~~ 286 (376) T protein:vir:78 211 ASFNNNEIAIVPQLEGFNYEEFGTTSVNNSQSFDEVKKLRKEMIDYVASILGIPSSLLH----GDMADLSNNMKAYMEYC 286 (376) T ss_pred ccccccCcceEEcCCCceEEeeccCccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhC----CCCCCHHHHHHHHHHHH Confidence 3 3447889999999999988866 49999999999999999999999997 57899999999999999 Q ss_pred HHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC--CeEee Q lcl|Aclame:pro 308 LQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENG--DKYIS 385 (416) Q Consensus 308 l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~gg--d~~~~ 385 (416) |.|++++||++||++|+++.+ .++.|+++.+++.|.+++++++.+++++|++|+||+|+++|+||+||| |++++ T Consensus 287 l~P~~~~ie~~l~~kll~~~~----~~~~~~~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~lg~~p~~~g~~d~~~~ 362 (376) T protein:vir:78 287 IDPLTKKLEDELNAKLFTFSE----FLAGEHIKIIHKKDIIENAEAVDKLVASGSFNRNEVRELLGAERVDNPELDKYLI 362 (376) T ss_pred HHHHHHHHHHHHHhhhCCccc----ceecccchhhcccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeee Confidence 999999999999999998754 467888889999999999999999999999999999999999999886 99999 Q ss_pred ccCccccccccccccccCCcccCCCCcc Q lcl|Aclame:pro 386 SLNYVFLDFLEEYQRLKAGGAMKGGDNK 413 (416) Q Consensus 386 ~~n~~~~~~~~~~~~~~~~~~~~gge~~ 413 (416) |+|++|+++.++ |- T Consensus 363 ~~n~~~~~~~~e--------------~g 376 (376) T protein:vir:78 363 TKNYQSADEGGE--------------DG 376 (376) T ss_pred ccCceehhcccc--------------CC Confidence 999999864322 11 No 76 >protein:vir:4828 Length: 382 # NCBI annotation: ORF24 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038325;genbank:gi:9634651;genbank:GeneID:1262630 Probab=100.00 E-value=4.4e-76 Score=433.71 Aligned_cols=370 Identities=19% Similarity=0.292 Sum_probs=302.3 Q ss_pred Ccch-hhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceee Q lcl|Aclame:pro 1 MLLE-RMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERK 79 (416) Q Consensus 1 m~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~ 79 (416) |.|. |++++++..+. .+.......+.+ .+.++..++.+.|+++++|++||++||+++|++||++++... T Consensus 1 Mg~f~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~v~~~~~l~~~~v~~~i~~ia~~ia~~~~~~~~~~~------ 70 (382) T protein:vir:48 1 MPIFNLATESPPDNQG---GFFDVVDSDFLA-SLKGNEWVSAETALRNSDLFSIINQLSNDLATVKLITSRKKL------ 70 (382) T ss_pred CccccccccCCccccc---ccccchhhhccc-cccCCcccchHhhhccHHHHHHHHHHHHhhccCceeeecchh------ Confidence 7654 44444433222 222222233322 355677899999999999999999999999999999997542 Q ss_pred eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeCC-- Q lcl|Aclame:pro 80 PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNG-- 157 (416) Q Consensus 80 ~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~-- 157 (416) ..|+.+||++||+++||+.++.+++++||||+++.|+..|++++|+|++|++|++..+.+++.++|.+...+ T Consensus 71 ------~~L~~~PN~~~t~~~f~~~l~~~l~l~Gna~~~i~rd~~G~~~~l~~i~~~~v~v~~~~~~~~~~y~~~~~~~~ 144 (382) T protein:vir:48 71 ------QGIVDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNKDGIYYNITFDDPR 144 (382) T ss_pred ------hhhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCCeEEEEEEecCcc Confidence 358899999999999999999999999999999999999999999999999999999988888887775443 Q ss_pred --eeEEechhheeeeccCCCCc-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 158 --KAIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK 234 (416) Q Consensus 158 --~~~~~~~~~vih~~~~~~~~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~ 234 (416) ..+.+++++|||+++++.++ ++|+||+.++..++....++.+++.++|+||+.|++++++++.+++++.+++++.|. T Consensus 145 ~~~~~~~~~~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~e~~~~~~~~~~ 224 (382) T protein:vir:48 145 IPPKQHVPQNDVLHFRLLSVDGGMTSVSPLMALSRELDIQKASGNLTINSLKNALNANGILKIKGGGLLDFKTKLSRSRQ 224 (382) T ss_pred ccceeEEcCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCChHHHHHHHHHHH Confidence 45789999999999988776 899999999999999999999999999999999999999999999999999888886 Q ss_pred Hh-hcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 235 RV-NKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIV 313 (416) Q Consensus 235 ~~-~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~ 313 (416) .. .++|+++|+++|++|++++.+++|++++|.+++++++||++|||||.+||..+++ ++.+++.+.|++.||.|+++ T Consensus 225 ~~~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVp~~~lg~~~~~--~~~~~~~~~~~~~~l~p~~~ 302 (382) T protein:vir:48 225 AMKQMQGGPLVLDDLEDFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPDNVVGGQGDQ--QSSLEMSSDLYSKAVSRYLR 302 (382) T ss_pred hhccCCCCeeEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCc--ccHHHHHHHHHHHHHHHHHH Confidence 54 4678999999999999999999999999999999999999999999999976543 46788889999999999999 Q ss_pred HHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC-----CCCCCeEeeccC Q lcl|Aclame:pro 314 NFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNP-----IENGDKYISSLN 388 (416) Q Consensus 314 ~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p-----~~ggd~~~~~~n 388 (416) .|+++|+++|+++.+.. .... ...+.......+.+++++|++|+||+|+.++..+ +++|+.+. T Consensus 303 ~i~~~l~~~l~~~~~~~--~~~~------~~~~~~~~~~~~~~l~~~g~~t~~e~r~~l~~~g~~~~~~~~~~~~~---- 370 (382) T protein:vir:48 303 PFLSELSQKLSCDVDAD--IFPA------VDPTGSNYISRINSLVKTGTLAQNQGLYILQQAEILPKELPNGENPN---- 370 (382) T ss_pred HHHHHHHHHhcChhhhh--hhhh------hccchhHHHHHHHHHhhcCccCHHHHHHHHhhCCCCCcchhhhhcCC---- Confidence 99999999999865432 1222 2234445556677889999999999999875332 23333221 Q ss_pred ccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 389 YVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ++.+|||++++- T Consensus 371 ----------------~~~~GGd~~~~~ 382 (382) T protein:vir:48 371 ----------------STLKGGEEDGQD 382 (382) T ss_pred ----------------CCCCCCCCCCCC Confidence 123566655555 No 77 >protein:vir:98643 Length: 395 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1601 # MgeName: phi3396 # Cross-refs: genbank:acc:YP_001039921;genbank:gi:126011096;genbank:GeneID:4818479 Probab=100.00 E-value=9e-76 Score=432.01 Aligned_cols=375 Identities=13% Similarity=0.110 Sum_probs=284.6 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.|..+|.++........... .....++.+.++++++|++||++||+++|++|+++++.+++ ... T Consensus 1 MGlf~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~v~~~I~~ia~~iA~lp~~~~~~~~~---~~~ 65 (395) T protein:vir:98 1 MGILDFFSFKKSGTLSDDDSG------------STTSEKLTNVVLKEDALYKCVNYLARIISKSTFRLKTPEKL---TEN 65 (395) T ss_pred CcchhhhcCCCcccccccccc------------hhhhhhcchhhhhhHHHHHHHHHHHHHHhhCceeEEecCCc---ccc Confidence 999888876643322221111 01122456778999999999999999999999999986543 345 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEE-EeeCCee Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQ-TVLNGKA 159 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~-~~~~~~~ 159 (416) +|+++++|+.+||++||+++||+.++.+++++||||+++.++..+.+... .+.... ..+...+.. +...... T Consensus 66 ~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~ 138 (395) T protein:vir:98 66 QKDWLYWINTKANPNQSASQFWVEVIQKLLVDGETLIFVIPGKGIYVADS------FTQDKK-ISGSQFKVSRVQGQTYE 138 (395) T ss_pred cchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeCCceecCCc------cccccc-ccCcccceeeecCceee Confidence 78999999999999999999999999999999999999998765433222 222211 111111111 1111224 Q ss_pred EEechhheeeeccCCCCcc-ccccHHHHHHHHHHHHHH--HHHHHHHHHhccCCcceeeccCCcC-CHHHHHHHHHHHHH Q lcl|Aclame:pro 160 IELYDYEVLHFKGLSTDGI-HGKSPIGVVREHIGAQAA--ATKYNAKLYKNEATPRGILKVPAFL-DEKPKENVRKEWKR 235 (416) Q Consensus 160 ~~~~~~~vih~~~~~~~~~-~G~s~~~~~~~~i~~~~~--~~~~~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~~~ 235 (416) .++++++|||+|+.+.++. ++.+++......+..... ......+++.++..+.+++...... ++++.+..++.++. T Consensus 139 ~~~~~~evih~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (395) T protein:vir:98 139 KTFTFDQVIYLKNDNSDLMSKVESLWEEYGELLGHVINNQKIANQIRFTMIPPKDKVRERAQENSDGGRQSKSDKDFFKR 218 (395) T ss_pred eEecCccEEEecCCCCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCcHHHHHHHHHHHHH Confidence 6789999999998776654 344455555555544433 3444566778888888888765543 44455555554543 Q ss_pred hh-----cCCceeecCCCceeEeccC------ChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHH Q lcl|Aclame:pro 236 VN-----KVENIAIIDYGLEYQSISM------PLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYV 304 (416) Q Consensus 236 ~~-----~~~~~~vl~~g~~~~~~~~------~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~ 304 (416) .. +++.++++++|++|+++++ +++++|+.+.+++++++||++|||||.+|+ +++++.|++...|+ T Consensus 219 ~~~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVP~~~l~----~~~sn~e~~~~~f~ 294 (395) T protein:vir:98 219 TVEKIRTESVVGIPVTANTNYEEYGSKNTGAVKSYVDDIKKLKDQYMAEFAEMLGIPISLLH----GDIADNQKNYELLL 294 (395) T ss_pred HHhhhhcCCcceeecCCCceeEecccccccccChhHHHHHHHHHHHHHHHHHHhCCCHHHhc----CCcccHHHHHHHHH Confidence 22 3345788999999999985 466789999999999999999999999996 67899999999999 Q ss_pred HHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCe Q lcl|Aclame:pro 305 RNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDK 382 (416) Q Consensus 305 ~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~ 382 (416) ++||.|++.+||++||++||++.++..+. +|+++++++.|.+++++++.+++++|++|+||+|+++|+||+|| ||+ T Consensus 295 ~~tl~P~~~~ie~~l~~kll~~~~~~~g~--~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~Pi~~~~gD~ 372 (395) T protein:vir:98 295 EGPIESLITNIVDGLEYAIFDKSETLQGS--FIKVTGLKNYDLFSISNQADKLISSGFVFIDEVREEIGLPELPDGLGKV 372 (395) T ss_pred HHHHHHHHHHHHHHHHHhcCChhhhcCcc--eeeehhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCce Confidence 99999999999999999999988876665 46778999999999999999999999999999999999999977 999 Q ss_pred EeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 383 YISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 383 ~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +++++|++|++. +|||++++. T Consensus 373 ~~~~~n~~~~~~-------------~gge~~~~~ 393 (395) T protein:vir:98 373 LYMTKNYESVLE-------------RGGEVDEEV 393 (395) T ss_pred eeecccceeccc-------------ccCCCCCCC Confidence 999999999863 456655555 No 78 >protein:vir:63755 Length: 547 # NCBI annotation: gp14 # Family: family:all:2446 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547619;genbank:GeneID:3783506 Probab=100.00 E-value=1.2e-75 Score=431.32 Aligned_cols=411 Identities=11% Similarity=0.082 Sum_probs=295.4 Q ss_pred Ccchhh----hccccccccccccchhHHHhhhcCccccccccc-------cHHHHhccHHHHHHHHHHHHhhccCc---- Q lcl|Aclame:pro 1 MLLERM----FEKRSGSSDHEDGFNNILLNMFGGRKTASGERV-------SESNSLVQPDIFACVNVLSDDIAKLP---- 65 (416) Q Consensus 1 m~~~~~----f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~a~~~~~v~~~i~~ia~~ia~~~---- 65 (416) ..+.++ ..|-...+.............+..+....+... ..+.+..+++|++||+.||+.||.+. T Consensus 29 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~npiv~~~I~~~a~~ia~~~~~~~ 108 (547) T protein:vir:63 29 IAIQQREQEQISKAMNNKEVAYSQPVIGSMSANPGFKTKPSIRNNQDLHGVLKKFGGNIILNAIINTRSNQVSMYCKPAR 108 (547) T ss_pred hhhhhhhHHHHHHhhcccchhhhchhhheeecccccccCCccCChhHHHHHHHHhhcCHHHHHHHHHHHHHHhhhhhhhh Confidence 111121 111100111110000000111111111111111 12456678999999999999999642 Q ss_pred -------ceEEeecCCc---ceeeeccchhhhhccccccc-----cCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEE Q lcl|Aclame:pro 66 -------IHTYKRTDGG---IERKPEHKSAHAVYARPNPY-----MTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEAL 130 (416) Q Consensus 66 -------~~~~~~~~~~---~~~~~~~~~~~~l~~~PN~~-----~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l 130 (416) |.+.-.+.+. .......+....++.+||++ +|+.+||+.++.+++++||+|+++.|+..|+|.+| T Consensus 109 ~~~~~~~~~ir~k~~~~~~~~~~~~~~~~l~~~l~~pn~~~~p~~~s~~~f~~~lv~d~ll~Gn~~~~i~rd~~G~~~~L 188 (547) T protein:vir:63 109 HSEKGVGFEVRLKDLDKKPTSHDEATIKRIESFIEKTGVDNDINRDSFSSFVKKIVRDTYMYDQVNFEKVFNRNQSMVRF 188 (547) T ss_pred hhccCCCceeEecccccccChhhHHHHHHHHHHHHhhCCCCCCccchHHHHHHHHHHHHHhhCCEEEEEEECCCCcEEEE Confidence 3332221111 11111112233345678876 48899999999999999999999999999999999 Q ss_pred EeeccceEEEEEcCCCc-----EEEEEEeeCCeeEEechhheeeeccCCCC----ccccccHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 131 FPLRPDYTNAYVHPTTG-----MLWYQTVLNGKAIELYDYEVLHFKGLSTD----GIHGKSPIGVVREHIGAQAAATKYN 201 (416) Q Consensus 131 ~~l~p~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~vih~~~~~~~----~~~G~s~~~~~~~~i~~~~~~~~~~ 201 (416) |||+|++|++..+.++. ..|+++..++..+.+++++|||+++++.. +.+|+||+..+..++....++.+++ T Consensus 189 ~~l~p~~V~~~~~~~g~~~~~~~~y~~~~~~~~~~~~~~~eiih~r~n~~~~~~~~~~G~Spi~~~~~~i~~~~~a~~~~ 268 (547) T protein:vir:63 189 VAKDPTTIFFATTADGKIPDNGNRFVQVIDQKIVATFNAREMAFAVRNPRSDIYATGYGYPELEIALKQFIAHENTEAFN 268 (547) T ss_pred EEecCceeEEEECCccccccCceEEEEEcCCcEEEEeccccEEEecccCCCCcccccccccHHHHHHHHHHHHHHHHHHH Confidence 99999999999887664 34555555566778999999999976543 4679999999999999999999999 Q ss_pred HHHHhccCCcceeeccCC--cCCHHHHHHHHHHHHHhh----cCCceeec-CCCceeEeccCChhhHHHHHHHHHHHHHH Q lcl|Aclame:pro 202 AKLYKNEATPRGILKVPA--FLDEKPKENVRKEWKRVN----KVENIAII-DYGLEYQSISMPLQEAQFVESMKFNKAQI 274 (416) Q Consensus 202 ~~~~~n~~~~~~v~~~~~--~~~~e~~~~~~~~~~~~~----~~~~~~vl-~~g~~~~~~~~~~~d~~~~e~~~~~~~~I 274 (416) .++|+||++|+++|++++ .+++++.+++++.|++.+ ++|+++|+ ++|++|++++++++|++|+|++++++++| T Consensus 269 ~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lk~~~~~~~~G~~nagk~~vl~~~g~~~~~l~~~~~d~qfle~~~~~~~~I 348 (547) T protein:vir:63 269 DRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVVSAEDVKFVNMTPSARDMEFEKWLNYLINVI 348 (547) T ss_pred HHHHHcCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEcCCChhHHHHHHHHHHHHHHH Confidence 999999999999998764 489999999999998764 66777665 68899999999999999999999999999 Q ss_pred HHHhccchhhcccccCC----------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhh Q lcl|Aclame:pro 275 SMIYKVPLHKLNELDKA----------TFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELR 344 (416) Q Consensus 275 a~~~gvp~~~lg~~~~~----------~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~ 344 (416) |++|||||.+||..+.+ +++|.|++...|++.||+|++..||++||++|++..+ . .+.|+++.+.. T Consensus 349 a~afgVPP~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~~~~~tL~P~~~~ie~~ln~~L~~~~~--~--~~~~~f~~~~~ 424 (547) T protein:vir:63 349 SALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGFIEDFINKHIVAEFG--D--KYTFQFVGGDI 424 (547) T ss_pred HHHhCCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--C--ceEEEeecccc Confidence 99999999999975543 7899999999999999999999999999999987543 2 35556667777 Q ss_pred ccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCC-CCCCCeEeeccCccccccccccccc-------------------c-C Q lcl|Aclame:pro 345 GDSKTQAEYLKTLHETGVLNKDEIRELLERNP-IENGDKYISSLNYVFLDFLEEYQRL-------------------K-A 403 (416) Q Consensus 345 ~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p-~~ggd~~~~~~n~~~~~~~~~~~~~-------------------~-~ 403 (416) .+...+++.+ +++.+|+||+||+|+++|||| +||||+++.+.+..+++.....++. . + T Consensus 425 ~~~~~~~~~~-~~~~~g~lT~NE~R~~~gl~P~~egGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (547) T protein:vir:63 425 KSELESVKIL-AEKAKVAMTVNEVRKELNLPGDVIGGDIPLNGVIVQRIGQLMQQEQFEHEKQQSNLQMLQEQTGNRVST 503 (547) T ss_pred ccHHHHHHHH-HHHhCCCcCHHHHHHHhCCCCCCCCCceeecccccccccccccccCCccccchhhccccccccCCCCCC Confidence 7777776655 477789999999999999998 7999999999988776543221100 0 0 Q ss_pred CcccCCCCccCCC Q lcl|Aclame:pro 404 GGAMKGGDNKNEG 416 (416) Q Consensus 404 ~~~~~gge~~~~~ 416 (416) .++.++.+++++| T Consensus 504 ~~~~~~~~~~~~~ 516 (547) T protein:vir:63 504 DVEDIPDGKDTTG 516 (547) T ss_pred CCCCCCCCcccCC Confidence 0001111111111 No 79 >protein:vir:858 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:18 # MgeName: bIL170 # Cross-refs: genbank:acc:NP_047117;genbank:gi:9630570;genbank:GeneID:1261758 Probab=100.00 E-value=1.6e-75 Score=430.70 Aligned_cols=357 Identities=15% Similarity=0.162 Sum_probs=279.7 Q ss_pred Ccchh-hhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcc--- Q lcl|Aclame:pro 1 MLLER-MFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI--- 76 (416) Q Consensus 1 m~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~--- 76 (416) |.|.. ++.......... .+.....+....++.+++|++||++||++||++|+++++.++++. T Consensus 1 M~~f~k~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~~~~~ 66 (378) T protein:vir:85 1 MNLFGKVVSFSRGKLNND--------------TQRVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGSD 66 (378) T ss_pred CchhhhhhhhhhcccccC--------------CcceeeeeccchhhhhHHHHHHHHHHHHhHhhCceeEEEEeccccccc Confidence 77644 332111111000 011112234456678899999999999999999999998876543 Q ss_pred --eeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEe-ecCCCcEEEEEeeccceEEEEEcCCCcEEEEEE Q lcl|Aclame:pro 77 --ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQ-FGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQT 153 (416) Q Consensus 77 --~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~-r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~ 153 (416) .+..+|+++++|+.+||++||+++||+.++.+++++||||++++ ++..|.+..+++ T Consensus 67 ~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~--------------------- 125 (378) T protein:vir:85 67 TLISMAGSDLDEVLNWSYKGEHNSMEFWQKVIKKLLCTRYVDLYPIFDSETGELLDLLF--------------------- 125 (378) T ss_pred cccccccchHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEeecCCCceEEEEEe--------------------- Confidence 24578999999999999999999999999999999999999864 444454433322 Q ss_pred eeCCeeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHH Q lcl|Aclame:pro 154 VLNGKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKE 232 (416) Q Consensus 154 ~~~~~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~ 232 (416) . ...+.+.+++|+|++.+ +.++ +.+.+..+.+.+ ...+++ +.|+++++.++.+++++.+++++. T Consensus 126 -~-~~~~~~~~~dvih~~~~~~~~~--~~~~~~~a~~~~----------~~~~~~-~~~~g~l~~~~~l~~~~~~~~~~~ 190 (378) T protein:vir:85 126 -A-NDKKEYKPEELVRLVSPFYINE--DTSILDNALASI----------QTKLEQ-GKLRGLLKINAFLDIDNTQEYREK 190 (378) T ss_pred -c-CCCEEEcccceEEEecCcCccc--hhhHHHHHHHHH----------HHHHhc-CCcceEEEeCCcCCHHHHHHHHHH Confidence 1 22346778999999854 3222 233444433332 233444 478999999999999888888777 Q ss_pred HHHh-------hcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHH Q lcl|Aclame:pro 233 WKRV-------NKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVR 305 (416) Q Consensus 233 ~~~~-------~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~ 305 (416) |++. .++++++||++|++|++++++++++++ +.+++++++||++|||||.+|+. ++.|++..+|+. T Consensus 191 ~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~~------s~~e~~~~~f~~ 263 (378) T protein:vir:85 191 ALATIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIELIKSELLTGYFMNENILLG------TATQEQQIYFYN 263 (378) T ss_pred HHHHHHHhhcccccccceecCCCceEEeccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC------CchHHHHHHHHH Confidence 7643 256789999999999999999999996 77899999999999999999952 445889999999 Q ss_pred HHHHHHHHHHHHHHHHhhcCchhccccc------chhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Q lcl|Aclame:pro 306 NTLQPWIVNFEQELNVKLFLDHDQKSGH------YVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN 379 (416) Q Consensus 306 ~~l~P~~~~i~~~l~~~l~~~~~~~~~~------~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g 379 (416) +||.|++.+||++|+++||++.++..++ ++.|+.+.+++.|.+++++.+.+++++|+||+||+|+++|+||+|| T Consensus 264 ~tL~P~~~~ie~~l~~kLl~~~er~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~lgl~p~~g 343 (378) T protein:vir:85 264 STIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGEQPIEG 343 (378) T ss_pred HHHHHHHHHHHHHHHhhcCChhhhhhhhhccccceeeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Confidence 9999999999999999999988776654 3679999999999999999999999999999999999999999999 Q ss_pred CCeEeeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 380 GDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 380 gd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) ||++++|+|++|++.++..+..++ +..+++|++|| T Consensus 344 GD~~~~~~N~~~~~~~~~~~~~~~-~~~~~~e~~n~ 378 (378) T protein:vir:85 344 GDIYIANLNAVAVKNLSDLQGSRK-DVASTDETNNQ 378 (378) T ss_pred CCeEeecccccccccchhhcCccC-CCCCCCCCCCC Confidence 999999999999999887766554 44567888888 No 80 >protein:vir:94869 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1532 # MgeName: P008 # Cross-refs: genbank:acc:YP_762515;genbank:gi:115304214;genbank:GeneID:5141182 Probab=100.00 E-value=1.9e-75 Score=430.29 Aligned_cols=359 Identities=15% Similarity=0.146 Sum_probs=281.4 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcc---- Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI---- 76 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~---- 76 (416) |.|.+-|.......... ..+.+...+....+++.++|++||++||++||++|+++|+....+. T Consensus 1 M~if~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~v~~~v~~Ia~~iA~lp~~~~~~~~~~~~~~~ 67 (378) T protein:vir:94 1 MNLFGKVVSFSRGKLNN-------------DTQRVTAWQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDVGSDT 67 (378) T ss_pred CchhHHhHhhhhccccc-------------CcceeeeeecchhhhhhHHHHHHHHHHHHhHhhCceeeeeeccccccccc Confidence 87665443211111000 0111222334456678889999999999999999999998765432 Q ss_pred -eeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEe-ecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEe Q lcl|Aclame:pro 77 -ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQ-FGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTV 154 (416) Q Consensus 77 -~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~-r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~ 154 (416) .+..+|+++++|+.+||++||+++||+.++.+++++||||++++ ++..|.+..+++. T Consensus 68 ~~~~~~~~l~~lLn~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~~--------------------- 126 (378) T protein:vir:94 68 LISMAGSDLDEVLNWSSKGERNSMEFWQKVIKKLLTTRYIDLYPIFDSETGELLDLLFA--------------------- 126 (378) T ss_pred ccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCCcEEEEEEe--------------------- Confidence 34568999999999999999999999999999999999999854 4455555444322 Q ss_pred eCCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 155 LNGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK 234 (416) Q Consensus 155 ~~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~ 234 (416) ...+++++++|+|++++...+ .+.+++..+...+. ..+++ +.++++++.++.+++++.++++++|+ T Consensus 127 --~~~~~~~~~dvih~~~~~~~~-~~~~~~~~~~~~~~----------~~~~~-~~~~g~l~~~~~l~~~~~~~~~e~~~ 192 (378) T protein:vir:94 127 --NDKKEYKPEELVRLTSPFYIN-EDTSILDNALASIQ----------TKLEQ-GKLRGLLKINAFLDIDNTQEYREKAL 192 (378) T ss_pred --cCcEEechhceeeecCcCCcc-cchhHHHHHHHHHH----------HHHhh-CCcccceeeCCcCCHHHHHHHHHHHH Confidence 123568899999999654322 24455555554433 22334 46889999999999887766666655 Q ss_pred Hh-------hcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHH Q lcl|Aclame:pro 235 RV-------NKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNT 307 (416) Q Consensus 235 ~~-------~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~ 307 (416) +. .++++++||++|++|++++++++++++ +.+++++++||++|||||.+|+. + +.|++..+|+++| T Consensus 193 ~~~~~~~~~~n~~~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgvPp~~l~g----~--~~e~~~~~f~~~t 265 (378) T protein:vir:94 193 ATIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG----T--ATQEQQIYFYNST 265 (378) T ss_pred HHHHHhhcccccccceeccCCceEEEccCChHHhhH-HHHHHHHHHHHHHhCCCHHHhcC----C--chHHHHHHHHHHH Confidence 43 245679999999999999999999996 77899999999999999999953 3 3378889999999 Q ss_pred HHHHHHHHHHHHHHhhcCchhccccc------chhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Q lcl|Aclame:pro 308 LQPWIVNFEQELNVKLFLDHDQKSGH------YVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD 381 (416) Q Consensus 308 l~P~~~~i~~~l~~~l~~~~~~~~~~------~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd 381 (416) |.|+++.||++||++||++.++..++ +++|+.+.+++.|.+++++++.+++++|+||+||+|+++|+||+|||| T Consensus 266 l~P~~~~ie~~l~~~Ll~~~e~~~g~~~~~~~~~~f~~~~l~~~d~~~~~e~~~~~~~~G~~t~NE~R~~~g~~p~~ggd 345 (378) T protein:vir:94 266 IIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGEQPIEGGD 345 (378) T ss_pred HHHHHHHHHHHHHhhcCChhHhhhhhhhcccceeEeecchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Confidence 99999999999999999987776654 467999999999999999999999999999999999999999999999 Q ss_pred eEeeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 382 KYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 382 ~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) ++++|+|++|++..++.+..++ +..+|+|++|| T Consensus 346 ~~~~~~n~~~~~~~~~~~~~~~-~~~~~~e~~n~ 378 (378) T protein:vir:94 346 VYIANLNAVAVKNLSDLQGNRK-DVTSTDETNNQ 378 (378) T ss_pred eeeecccccchhcchhcccccC-CCCCCCCCCCC Confidence 9999999999999888766554 45578888888 No 81 >protein:vir:96579 Length: 576 # NCBI annotation: ORF012 # Family: family:all:2446 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238542;genbank:gi:66391267;genbank:GeneID:5130361 Probab=100.00 E-value=5.8e-74 Score=422.08 Aligned_cols=409 Identities=13% Similarity=0.166 Sum_probs=292.0 Q ss_pred Ccchhhhccccccccc----cccchhHHHhhhcCccccccccc----------cHHHHhccHHHHHHHHHHHHhhccC-- Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDH----EDGFNNILLNMFGGRKTASGERV----------SESNSLVQPDIFACVNVLSDDIAKL-- 64 (416) Q Consensus 1 m~~~~~f~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----------~~~~a~~~~~v~~~i~~ia~~ia~~-- 64 (416) -+|+++-++....... .+.+...+...+++.......++ ....+..+++|++||++||+.||++ T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~npiv~~~I~~ia~~vA~~~~ 112 (576) T protein:vir:96 33 ANIRNIEEKSKELNKSLYGKQQAYAEPFLEVMDTNPEFRTKRSYMKNSDNLHDVLKQFGNNPILNAIILTRSNQVAMYCQ 112 (576) T ss_pred HHHHHhhhhhhhhccccCCccchhhcceeeeeecCCCccccCcchhhhhhhHHHHHHhhcCHHHHHHHHHHHHHHHhhhh Confidence 3333433221111111 11111111111222222111111 1134456899999999999999973 Q ss_pred ---------cceEEeecCCcc----eeeeccch---hhhhccccccc-cCHHHHHHHHHHHHHHcCCeEEEEee--cCCC Q lcl|Aclame:pro 65 ---------PIHTYKRTDGGI----ERKPEHKS---AHAVYARPNPY-MTAFTWKKLMMTHVLTWGNAYSYIQF--GSHG 125 (416) Q Consensus 65 ---------~~~~~~~~~~~~----~~~~~~~~---~~~l~~~PN~~-~s~~~f~~~~~~~~l~~G~~~~~i~r--~~~g 125 (416) +|.+...+.++. .....+++ ...++..|||+ +|+.+||+.++.+++++||+|+++++ +..| T Consensus 113 ~~~~~~~~~~~~i~lk~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~dlll~Gna~~~i~~~rd~~g 192 (576) T protein:vir:96 113 PSRYNERGLGFEVRMRDLDAEPGKKEKEEIKRIENFILNTGRDKDIDRDSFQSFCRKIVRDTYTYDQVNFEKVFNKKNAT 192 (576) T ss_pred hhhhccccccceeEEecCcCccchhhhHhhhhHHhhHhhccCCCCCccccHHHHHHHHHHHHHhcCCeEEEEEEecCCCC Confidence 344433322211 11111222 22223445555 58999999999999999999999875 4568 Q ss_pred cEEEEEeeccceEEEEEcCCCcEEE-----EEEeeCCeeEEechhheeeec-cCCCC---ccccccHHHHHHHHHHHHHH Q lcl|Aclame:pro 126 YPEALFPLRPDYTNAYVHPTTGMLW-----YQTVLNGKAIELYDYEVLHFK-GLSTD---GIHGKSPIGVVREHIGAQAA 196 (416) Q Consensus 126 ~~~~l~~l~p~~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~vih~~-~~~~~---~~~G~s~~~~~~~~i~~~~~ 196 (416) ++++|+||+|++|++..+.++..++ +.+..++....+++++|||++ +++.+ +.+|+||+.++..++....+ T Consensus 193 ~~~~L~pl~p~~V~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~ 272 (576) T protein:vir:96 193 TMDKFIAVDPSTIFYATDKNGKIIKGGKRFVQVINKKVVASFTSREMAMGIRNPRTELSSSGYGLSEVEIAMKQFIAYNN 272 (576) T ss_pred ceEEEEEeCCceeEEEECCCCceeeeeeEEEEecCCceEEEecccceEEEeecCCCCcccCcccccHHHHHHHHHHHHHH Confidence 8999999999999999998886543 233344556788999998766 44444 57899999999999999999 Q ss_pred HHHHHHHHHhccCCcceeeccCC--cCCHHHHHHHHHHHHHhh----cCCc-eeecCCCceeEeccCChhhHHHHHHHHH Q lcl|Aclame:pro 197 ATKYNAKLYKNEATPRGILKVPA--FLDEKPKENVRKEWKRVN----KVEN-IAIIDYGLEYQSISMPLQEAQFVESMKF 269 (416) Q Consensus 197 ~~~~~~~~~~n~~~~~~v~~~~~--~~~~e~~~~~~~~~~~~~----~~~~-~~vl~~g~~~~~~~~~~~d~~~~e~~~~ 269 (416) +.+++.++|+||++|+++++.++ .+++++.+++++.|++.+ ++++ ++|+++|++|++++++++|++|+|.+++ T Consensus 273 ~~~~~~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lr~~~~~~~~G~~nag~~p~vl~~G~~~~~ls~~~~d~qfle~~~~ 352 (576) T protein:vir:96 273 TETFNDRFFSHGGTTRGILQIKSEQQQSQRALENFKREWKSSFSGINGSWQVPVVMADDIKFVNMTPTANDMQFEKWLTY 352 (576) T ss_pred HHHHHHHHHhccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceeecCCCceEEeccCChhhHHHHHHHHH Confidence 99999999999999999999865 579999999999998764 4566 5899999999999999999999999999 Q ss_pred HHHHHHHHhccchhhcccccCC-----------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhh Q lcl|Aclame:pro 270 NKAQISMIYKVPLHKLNELDKA-----------TFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFN 338 (416) Q Consensus 270 ~~~~Ia~~~gvp~~~lg~~~~~-----------~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~ 338 (416) ++++||++|||||.+||..+.+ |++|+|++.+.|++.||+|++..||++||++|++..+ .. +.|+ T Consensus 353 ~~~~Ia~afgVPp~~lG~~~~~~~~g~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~--~~--~~~~ 428 (576) T protein:vir:96 353 LINIISALYGIDPAEIGFPNRGGATGGKGGNTLNEADPGKKQQQSQNKGLQPLLRFIEDLINTHIISEYS--DK--YVFQ 428 (576) T ss_pred hHHHHHHHhCCCHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcc--Cc--eEEE Confidence 9999999999999999987654 7899999999999999999999999999999997643 22 3333 Q ss_pred hhhhhhccHHHHHHHHHHH--HhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccC------------- Q lcl|Aclame:pro 339 IDSELRGDSKTQAEYLKTL--HETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKA------------- 403 (416) Q Consensus 339 ~~~l~~~d~~~~~~~~~~~--~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~------------- 403 (416) +++.|.+++++.+..+ +.+|+||+||+|+++||||+||||++++|.++.+++.......... T Consensus 429 ---f~r~d~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~piegGD~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 505 (576) T protein:vir:96 429 ---FVGGDTKSELDKIKILQEEVKTYKTVNEARKEKGLKPIEGGDVLLDGSFIQSMSLNTQKEQYEDTKQKERFDMIQQF 505 (576) T ss_pred ---eccCCHHHHHHHHHHHHHHhcCccCHHHHHHHhCCCCCCCcceeccccccccccccccCCCCCCccccccccccccc Confidence 3456777777666543 5679999999999999999999999999999887764332110000 Q ss_pred --C-----cccCCCCccCCC Q lcl|Aclame:pro 404 --G-----GAMKGGDNKNEG 416 (416) Q Consensus 404 --~-----~~~~gge~~~~~ 416 (416) + +.....+.+++| T Consensus 506 ~~~~~~~~~~~~s~~~~~~g 525 (576) T protein:vir:96 506 LNSPDDEEPQQESTEDKVDG 525 (576) T ss_pred cCCCCCCCCCCCCCCCcccc Confidence 0 000111122222 No 82 >protein:vir:3153 Length: 467 # NCBI annotation: capsid protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665924;genbank:gi:22091110;genbank:GeneID:951257 Probab=100.00 E-value=2.7e-74 Score=423.95 Aligned_cols=375 Identities=16% Similarity=0.124 Sum_probs=292.7 Q ss_pred cHHHHhccHHHHHHHHHHHHhhccCcceEEeecCC---cc-eeeeccchhhhhcccccccc--------CHHHHHHHHHH Q lcl|Aclame:pro 40 SESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDG---GI-ERKPEHKSAHAVYARPNPYM--------TAFTWKKLMMT 107 (416) Q Consensus 40 ~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~---~~-~~~~~~~~~~~l~~~PN~~~--------s~~~f~~~~~~ 107 (416) -++-+..+++|++||++||+++|++|++++...+. ++ ....++....++..+||+.| ++.+||+.++. T Consensus 1 l~~l~~~n~~v~~ci~~ia~~ia~~p~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~pn~~~~~~~~~~~t~~~~~~~~~~ 80 (467) T protein:vir:31 1 MAELLEHNETHAKCVHAKSRYVAGFGINIIPHPEAEDPDRDGEQYERVWDFWFGDDSNWQVGPMESERATATNVLQTAWT 80 (467) T ss_pred ChhhhhcCHHHHHHHHHHHHhhhcCCeEEEEccCcccccchhhhhhhHHHHhhccCCCccccchhhHhhHHHHHHHHHHH Confidence 33444458999999999999999999999865432 11 12223334456677888765 67789999999 Q ss_pred HHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCc-------EEEEEE----------------------eeCCe Q lcl|Aclame:pro 108 HVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTG-------MLWYQT----------------------VLNGK 158 (416) Q Consensus 108 ~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~-------~~~~~~----------------------~~~~~ 158 (416) +++++||||++++|+..|+|++|+|++|++|++..+.... ..++.+ ...+. T Consensus 81 ~l~l~Gn~~i~~~r~~~G~~~~l~~l~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (467) T protein:vir:31 81 DYEAIGWLTIEILTQTDGTPTGLAYVPGHTIRKRMDERGFVQLLEEKEKYFGVAGDRYQTNGNGDLDPVFVDADDGSTGT 160 (467) T ss_pred HHHhcCCeEEEEEECCCCcEEEEEEeCCceeEeeeecceeEeecCCceeeEEeccccceeecccceeeeeeeeccccccc Confidence 9999999999999999999999999999999987764321 111111 11234 Q ss_pred eEEechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcCCHHHHHHHHHHHHHh Q lcl|Aclame:pro 159 AIELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFLDEKPKENVRKEWKRV 236 (416) Q Consensus 159 ~~~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~~~e~~~~~~~~~~~~ 236 (416) .+.+++++|||+|.++ .++++|+||+..+..++....++.+++.++|+||++|+++++.+ +.+++++.+++++.|+.. T Consensus 161 ~~~~~~~diih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~~~~~~~~ 240 (467) T protein:vir:31 161 SVSNPANELIFKRNHSPLYPHYGAPDIIPAVKTIRGDSAAQDYNIDFFENDGVPRIAIIVKGAELTEKGREEMRNLIEDN 240 (467) T ss_pred eeEeccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHHHHHHHHHHHHhh Confidence 5679999999999775 57899999999999999999999999999999999999999975 579999999999998753 Q ss_pred h---------------cCCceeecCCCceeEec-------c-CChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc Q lcl|Aclame:pro 237 N---------------KVENIAIIDYGLEYQSI-------S-MPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF 293 (416) Q Consensus 237 ~---------------~~~~~~vl~~g~~~~~~-------~-~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~ 293 (416) . +++++++++.|.+++++ + .+++|++|.|.+++++++||++|||||.+||..+++++ T Consensus 241 ~~~~~~~~~~~~~g~~n~~~~~~l~~g~~~~~~~~~~~~ls~~~~~d~qf~e~~~~~~~~Ia~~fgVpp~~lG~~~~~~~ 320 (467) T protein:vir:31 241 NEDNHRTAFIETEKIVQNEDYLNLADGADRSDVEIRLEPLTVGIDEEASFLEFRGRNEHDILKVHDVPPVIAGVVESGAF 320 (467) T ss_pred hcchhhhhhhhhcccccccccccccCCCcccccceeEEeccccChhhHHHHHHHHHHHHHHHHHhCCCHHHcccCCCCCc Confidence 3 55678888877655554 3 36789999999999999999999999999998877766 Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHh Q lcl|Aclame:pro 294 -SNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELL 372 (416) Q Consensus 294 -s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~ 372 (416) ++.|++...|++.||.|+++.|+++||++|++......+++++|+++.+++.|.++++++++.++++|++|+||+|+++ T Consensus 321 ~s~~e~~~~~f~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~i~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~ 400 (467) T protein:vir:31 321 STDAEEQRKEFAEETIQPKQHDFGELLYELVHKQGLDAPDWTIEFELAKPDTKLQDVEIASQRVQAMQGLLTVNELRDEF 400 (467) T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhccCCceEEEecchhhccCHHHHHHHHHHHHhCCCcCHHHHHHHh Confidence 6899999999999999999999999999999987777889999999999999999999999999999999999999999 Q ss_pred CCCCCCCCCeEeeccCcccccccc--ccccccCCcccCCCCccCCC Q lcl|Aclame:pro 373 ERNPIENGDKYISSLNYVFLDFLE--EYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 373 gl~p~~ggd~~~~~~n~~~~~~~~--~~~~~~~~~~~~gge~~~~~ 416 (416) ||||+++++ +.+.+........ .+.........++++++-+. T Consensus 401 Gl~pi~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (467) T protein:vir:31 401 GFEPFPEEH--VYGGETLVAEVTGGSGPGGGIGDQIEQLVEDRADE 444 (467) T ss_pred CCCCCCccc--ccCCcccccccccccCCCCcccCcCCCCCCCcccc Confidence 999996543 3232211110000 00000011111111111111 No 83 >protein:vir:95599 Length: 563 # NCBI annotation: ORF014 # Family: family:all:2446 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240900;genbank:gi:66394963;genbank:GeneID:5132540 Probab=100.00 E-value=1.9e-73 Score=419.33 Aligned_cols=406 Identities=14% Similarity=0.158 Sum_probs=295.0 Q ss_pred Ccchhhhcccc-ccc-cccccchhHHHhhhcCcccc---cccc----ccHHHHhccHHHHHHHHHHHHhhcc-------- Q lcl|Aclame:pro 1 MLLERMFEKRS-GSS-DHEDGFNNILLNMFGGRKTA---SGER----VSESNSLVQPDIFACVNVLSDDIAK-------- 63 (416) Q Consensus 1 m~~~~~f~~~~-~~~-~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~a~~~~~v~~~i~~ia~~ia~-------- 63 (416) |+ ..++|.. ..+ .....+- .+++...+.... .... ...+.+..+++|.+||+.+++.+|. T Consensus 42 ~~--~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~n~i~~~~I~t~~~~vA~~~~~~~~~ 118 (563) T protein:vir:95 42 EY--QDLTKSLYGQQQAYAEPFI-EMMDTNPEFRDKRSYMKNEHNLHDVLKKFGNNPILNAIILTRSNQVAMYCQPARYS 118 (563) T ss_pred hH--HHHHhhhccCCCcchhhhH-hhhcccccccccccCCCCcccHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhhhhh Confidence 22 2233211 111 1111111 122222222211 1111 1134445688899999999999885 Q ss_pred -----CcceEEeecCCccee--eeccchhhhhc---cccccc-cCHHHHHHHHHHHHHHcCCeEEEEe--ecCCCcEEEE Q lcl|Aclame:pro 64 -----LPIHTYKRTDGGIER--KPEHKSAHAVY---ARPNPY-MTAFTWKKLMMTHVLTWGNAYSYIQ--FGSHGYPEAL 130 (416) Q Consensus 64 -----~~~~~~~~~~~~~~~--~~~~~~~~~l~---~~PN~~-~s~~~f~~~~~~~~l~~G~~~~~i~--r~~~g~~~~l 130 (416) ++++++..+..+..+ ...|++...|. ..|||+ +|+.+||+.++.+++++||+|++++ |+..|++.+| T Consensus 119 ~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~~lll~Gn~~~~~~~~rd~~G~~~~L 198 (563) T protein:vir:95 119 EKGLGFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDVDRDSFQTFCKKIVRDTYIYDQVNFEKVFNKNNKTKLEKF 198 (563) T ss_pred cccccceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHhcCCeEEEEEEEecCCCceEEE Confidence 577777655443221 22244433332 223333 6899999999999999999999865 7888999999 Q ss_pred EeeccceEEEEEcCCCcEE-----EEEEeeCCeeEEechhheeee-ccCCCC---ccccccHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 131 FPLRPDYTNAYVHPTTGML-----WYQTVLNGKAIELYDYEVLHF-KGLSTD---GIHGKSPIGVVREHIGAQAAATKYN 201 (416) Q Consensus 131 ~~l~p~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~vih~-~~~~~~---~~~G~s~~~~~~~~i~~~~~~~~~~ 201 (416) ||++|++|++..+.++..+ |+++..+.....+++++|||+ ++++.+ +.+|+||+..+..++....++++++ T Consensus 199 ~pl~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~evI~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~~~~~~ 278 (563) T protein:vir:95 199 IAVDPSTIFYATDKKGKIIKGGKRFVQVVDKRVVASFTSRELAMGIRNPRTELSSSGYGLSEVEIAMKEFIAYNNTESFN 278 (563) T ss_pred EEeCCceeEEEECCCCceeccceeEEEEeCCceeEEecCcceEEEeccCCCCcccCcccchHHHHHHHHHHHHHHHHHHH Confidence 9999999999999887653 333444455668888887755 466554 6789999999999999999999999 Q ss_pred HHHHhccCCcceeeccCC--cCCHHHHHHHHHHHHHhh----cCCce-eecCCCceeEeccCChhhHHHHHHHHHHHHHH Q lcl|Aclame:pro 202 AKLYKNEATPRGILKVPA--FLDEKPKENVRKEWKRVN----KVENI-AIIDYGLEYQSISMPLQEAQFVESMKFNKAQI 274 (416) Q Consensus 202 ~~~~~n~~~~~~v~~~~~--~~~~e~~~~~~~~~~~~~----~~~~~-~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I 274 (416) .++|+||++|+++|++++ .+++++.+++++.|++.+ ++|++ +|+++|++|++++++++|++|+|++++++++| T Consensus 279 ~~~f~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl~~G~~~~~l~~~~~d~qfle~~~~~~~~I 358 (563) T protein:vir:95 279 DRFFSHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGINGSWQIPVVMADDIKFVNMTPTANDMQFEKWLNYLINII 358 (563) T ss_pred HHHHHccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceEEcCCCceEEeccCChhHHHHHHHHHHHHHHH Confidence 999999999999999865 479999999999998765 45665 78999999999999999999999999999999 Q ss_pred HHHhccchhhcccccCC-----------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhh Q lcl|Aclame:pro 275 SMIYKVPLHKLNELDKA-----------TFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSEL 343 (416) Q Consensus 275 a~~~gvp~~~lg~~~~~-----------~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~ 343 (416) |++|||||.+||..+.+ +++|.|++.+.|++.||+|++..||++||++|++..+ ..+.|+ ++ T Consensus 359 a~afgVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~~~tL~P~l~~ie~~ln~~L~~~~~----~~~~~~---f~ 431 (563) T protein:vir:95 359 SALYGIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQNKGLQPLLRFIEDLVNRHIISEYG----DKYTFQ---FV 431 (563) T ss_pred HHHhCCCHHHccccccccccccccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcc----cccEEE---ec Confidence 99999999999987654 4578999999999999999999999999999997643 233443 35 Q ss_pred hccHHHHHHHHH--HHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccccccccccccc------------------- Q lcl|Aclame:pro 344 RGDSKTQAEYLK--TLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLK------------------- 402 (416) Q Consensus 344 ~~d~~~~~~~~~--~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~------------------- 402 (416) +.|.+++++.+. +++++|+||+||+|+++||||+||||++++|.++.+++......... T Consensus 432 r~D~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~Pi~gGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (563) T protein:vir:95 432 GGDTKSATDKLNILKLETQIFKTVNEAREEQGKKPIEGGDIILDASFLQGTAQLQQDKQYNDGKQKERLQMMMSLLEGDN 511 (563) T ss_pred cCCHHHHHHHHHHHHHhcCCccCHHHHHHHhCCCCCCCcceeecccccccccccccccCCCccccchhhhhcccccCCCC Confidence 677877777654 46889999999999999999999999999999988876543322100 Q ss_pred -CCcccCCCCccCC-C Q lcl|Aclame:pro 403 -AGGAMKGGDNKNE-G 416 (416) Q Consensus 403 -~~~~~~gge~~~~-~ 416 (416) .+++...++.+++ + T Consensus 512 ~~~~~~~~~~~~~~~~ 527 (563) T protein:vir:95 512 DDSEEGQSTDSSNDDK 527 (563) T ss_pred CCCCCCCCCCCCCCcc Confidence 0000001111111 1 No 84 >protein:vir:99312 Length: 563 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024471;genbank:gi:48696430;genbank:GeneID:2948040 Probab=100.00 E-value=1.9e-73 Score=419.33 Aligned_cols=406 Identities=14% Similarity=0.158 Sum_probs=295.0 Q ss_pred Ccchhhhcccc-ccc-cccccchhHHHhhhcCcccc---cccc----ccHHHHhccHHHHHHHHHHHHhhcc-------- Q lcl|Aclame:pro 1 MLLERMFEKRS-GSS-DHEDGFNNILLNMFGGRKTA---SGER----VSESNSLVQPDIFACVNVLSDDIAK-------- 63 (416) Q Consensus 1 m~~~~~f~~~~-~~~-~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~a~~~~~v~~~i~~ia~~ia~-------- 63 (416) |+ ..++|.. ..+ .....+- .+++...+.... .... ...+.+..+++|.+||+.+++.+|. T Consensus 42 ~~--~~~~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~n~i~~~~I~t~~~~vA~~~~~~~~~ 118 (563) T protein:vir:99 42 EY--QDLTKSLYGQQQAYAEPFI-EMMDTNPEFRDKRSYMKNEHNLHDVLKKFGNNPILNAIILTRSNQVAMYCQPARYS 118 (563) T ss_pred hH--HHHHhhhccCCCcchhhhH-hhhcccccccccccCCCCcccHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhhhhh Confidence 22 2233211 111 1111111 122222222211 1111 1134445688899999999999885 Q ss_pred -----CcceEEeecCCccee--eeccchhhhhc---cccccc-cCHHHHHHHHHHHHHHcCCeEEEEe--ecCCCcEEEE Q lcl|Aclame:pro 64 -----LPIHTYKRTDGGIER--KPEHKSAHAVY---ARPNPY-MTAFTWKKLMMTHVLTWGNAYSYIQ--FGSHGYPEAL 130 (416) Q Consensus 64 -----~~~~~~~~~~~~~~~--~~~~~~~~~l~---~~PN~~-~s~~~f~~~~~~~~l~~G~~~~~i~--r~~~g~~~~l 130 (416) ++++++..+..+..+ ...|++...|. ..|||+ +|+.+||+.++.+++++||+|++++ |+..|++.+| T Consensus 119 ~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~~lll~Gn~~~~~~~~rd~~G~~~~L 198 (563) T protein:vir:99 119 EKGLGFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDVDRDSFQTFCKKIVRDTYIYDQVNFEKVFNKNNKTKLEKF 198 (563) T ss_pred cccccceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHhcCCeEEEEEEEecCCCceEEE Confidence 577777655443221 22244433332 223333 6899999999999999999999865 7888999999 Q ss_pred EeeccceEEEEEcCCCcEE-----EEEEeeCCeeEEechhheeee-ccCCCC---ccccccHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 131 FPLRPDYTNAYVHPTTGML-----WYQTVLNGKAIELYDYEVLHF-KGLSTD---GIHGKSPIGVVREHIGAQAAATKYN 201 (416) Q Consensus 131 ~~l~p~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~vih~-~~~~~~---~~~G~s~~~~~~~~i~~~~~~~~~~ 201 (416) ||++|++|++..+.++..+ |+++..+.....+++++|||+ ++++.+ +.+|+||+..+..++....++++++ T Consensus 199 ~pl~p~~V~v~~~~~g~~~~~~~~y~~~~~g~~~~~~~~~evI~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~~~~~~ 278 (563) T protein:vir:99 199 IAVDPSTIFYATDKKGKIIKGGKRFVQVVDKRVVASFTSRELAMGIRNPRTELSSSGYGLSEVEIAMKEFIAYNNTESFN 278 (563) T ss_pred EEeCCceeEEEECCCCceeccceeEEEEeCCceeEEecCcceEEEeccCCCCcccCcccchHHHHHHHHHHHHHHHHHHH Confidence 9999999999999887653 333444455668888887755 466554 6789999999999999999999999 Q ss_pred HHHHhccCCcceeeccCC--cCCHHHHHHHHHHHHHhh----cCCce-eecCCCceeEeccCChhhHHHHHHHHHHHHHH Q lcl|Aclame:pro 202 AKLYKNEATPRGILKVPA--FLDEKPKENVRKEWKRVN----KVENI-AIIDYGLEYQSISMPLQEAQFVESMKFNKAQI 274 (416) Q Consensus 202 ~~~~~n~~~~~~v~~~~~--~~~~e~~~~~~~~~~~~~----~~~~~-~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I 274 (416) .++|+||++|+++|++++ .+++++.+++++.|++.+ ++|++ +|+++|++|++++++++|++|+|++++++++| T Consensus 279 ~~~f~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl~~G~~~~~l~~~~~d~qfle~~~~~~~~I 358 (563) T protein:vir:99 279 DRFFSHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGINGSWQIPVVMADDIKFVNMTPTANDMQFEKWLNYLINII 358 (563) T ss_pred HHHHHccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceEEcCCCceEEeccCChhHHHHHHHHHHHHHHH Confidence 999999999999999865 479999999999998765 45665 78999999999999999999999999999999 Q ss_pred HHHhccchhhcccccCC-----------CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhh Q lcl|Aclame:pro 275 SMIYKVPLHKLNELDKA-----------TFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSEL 343 (416) Q Consensus 275 a~~~gvp~~~lg~~~~~-----------~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~ 343 (416) |++|||||.+||..+.+ +++|.|++.+.|++.||+|++..||++||++|++..+ ..+.|+ ++ T Consensus 359 a~afgVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~~~tL~P~l~~ie~~ln~~L~~~~~----~~~~~~---f~ 431 (563) T protein:vir:99 359 SALYGIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQNKGLQPLLRFIEDLVNRHIISEYG----DKYTFQ---FV 431 (563) T ss_pred HHHhCCCHHHccccccccccccccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcc----cccEEE---ec Confidence 99999999999987654 4578999999999999999999999999999997643 233443 35 Q ss_pred hccHHHHHHHHH--HHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccccccccccccc------------------- Q lcl|Aclame:pro 344 RGDSKTQAEYLK--TLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLK------------------- 402 (416) Q Consensus 344 ~~d~~~~~~~~~--~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~------------------- 402 (416) +.|.+++++.+. +++++|+||+||+|+++||||+||||++++|.++.+++......... T Consensus 432 r~D~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~Pi~gGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (563) T protein:vir:99 432 GGDTKSATDKLNILKLETQIFKTVNEAREEQGKKPIEGGDIILDASFLQGTAQLQQDKQYNDGKQKERLQMMMSLLEGDN 511 (563) T ss_pred cCCHHHHHHHHHHHHHhcCCccCHHHHHHHhCCCCCCCcceeecccccccccccccccCCCccccchhhhhcccccCCCC Confidence 677877777654 46889999999999999999999999999999988876543322100 Q ss_pred -CCcccCCCCccCC-C Q lcl|Aclame:pro 403 -AGGAMKGGDNKNE-G 416 (416) Q Consensus 403 -~~~~~~gge~~~~-~ 416 (416) .+++...++.+++ + T Consensus 512 ~~~~~~~~~~~~~~~~ 527 (563) T protein:vir:99 512 DDSEEGQSTDSSNDDK 527 (563) T ss_pred CCCCCCCCCCCCCCcc Confidence 0000001111111 1 No 85 >protein:vir:4194 Length: 540 # NCBI annotation: putative portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:88 # MgeName: psiM100 # Cross-refs: genbank:acc:NP_071819;genbank:gi:11863102;genbank:GeneID:1257604 Probab=100.00 E-value=2.5e-72 Score=413.14 Aligned_cols=393 Identities=12% Similarity=0.051 Sum_probs=283.8 Q ss_pred Cc-----chhhhc---cccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeec Q lcl|Aclame:pro 1 ML-----LERMFE---KRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRT 72 (416) Q Consensus 1 m~-----~~~~f~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 72 (416) || +..+.+ .++........ ...+...+.... +. ....+.+..+++|++||++||+.+|++|++++... T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pp~--~~-~~La~~~~~n~~v~scI~~ia~~ia~~~~~i~~~~ 76 (540) T protein:vir:41 1 MFNYHLSIKSLEKYRAIKGDTDSQALK-EDRFEEYVEPKV--HP-LVLLSLLQVNPYHASACSIKANDILRTGYLIDGDD 76 (540) T ss_pred CCCcccChhhccchhhhhccccccccc-cCCCCccccCCC--CH-HHHHHHHHhcHHHHHHHHHHHHHHhcCCceEecCc Confidence 32 211111 11111111111 111111111100 00 01135566789999999999999999999987533 Q ss_pred CCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCc----- Q lcl|Aclame:pro 73 DGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTG----- 147 (416) Q Consensus 73 ~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~----- 147 (416) . .+..+ .||++||+.+||++++.+++++||||+++.|+..|++.+|+|++|++|++..+..+. T Consensus 77 ~---------~~~~~---lpN~~~t~~~f~~~~v~dlll~Gnayv~i~r~~~G~~~~L~~i~~~~V~v~~~~~~~~~~~d 144 (540) T protein:vir:41 77 G---------GVEEL---LRACRPSFEFILLQALEDLQVFNYCTLEVVRDDQGEPVRLDYIPAHTVRVHRDGSRYMQTWD 144 (540) T ss_pred c---------chhhh---ccCCCCCHHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCcceEEeEcCceeEeeec Confidence 2 22222 499999999999999999999999999999999999999999999999987654321 Q ss_pred --EEEEEE----------eeCCeeEEechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccee Q lcl|Aclame:pro 148 --MLWYQT----------VLNGKAIELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGI 214 (416) Q Consensus 148 --~~~~~~----------~~~~~~~~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v 214 (416) ..+|.. ......+.+++++|||+|.++ .++++|+||+..+..++....++.+++.++|+||++|+++ T Consensus 145 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~eViHir~~~~~~~~~G~Spi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~gi 224 (540) T protein:vir:41 145 GIHVTYFKDYRYEGEVNPDNGEDQDGVGANEIIFIHLPSPICSYYGVPRYLSAAPSILAMQKIDEYNYAFFDNYTIPSYV 224 (540) T ss_pred CceeeeeecccccceeeccccccceeecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceE Confidence 111111 112234578999999999775 5789999999999999999999999999999999999999 Q ss_pred eccCCcCCHHH----------HHHHHHHHHHh-----hcCCceeecC------CCceeEeccCChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 215 LKVPAFLDEKP----------KENVRKEWKRV-----NKVENIAIID------YGLEYQSISMPLQEAQFVESMKFNKAQ 273 (416) Q Consensus 215 ~~~~~~~~~e~----------~~~~~~~~~~~-----~~~~~~~vl~------~g~~~~~~~~~~~d~~~~e~~~~~~~~ 273 (416) ++.++.+++++ .+++++.|++. .++|+++||+ +|++|++++++++|++|+|.+++++++ T Consensus 225 L~~~g~l~~e~~~~~~~~~~~~~~~~~~~~~~~~g~~~nag~~~vLe~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~~e 304 (540) T protein:vir:41 225 ITVTGEFEDEMELGSDGEPTGRTVLQGLIEDNFKYLKEAPHTPLVFSIPGGDTVEVTFTPLNTSQKELSFREYAAEKKHD 304 (540) T ss_pred EEeCcccCchhccchHHHHHHHHHHHHHHHHHhccccccccceEEEecCCCcccceeEEecccchhHHHHHHHHHHHHHH Confidence 99987665432 24455555543 3567889884 799999999999999999999999999 Q ss_pred HHHHhccchhhcccccCC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHH Q lcl|Aclame:pro 274 ISMIYKVPLHKLNELDKA--TFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQA 351 (416) Q Consensus 274 Ia~~~gvp~~~lg~~~~~--~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~ 351 (416) ||++|||||.+||..+.+ +++|+|++...|+++||.|++++|+++||++|++..+ .+++++|+.+.+++.|.+++ T Consensus 305 Ia~afgVPp~~lG~~~~~~~n~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~--~~~~i~f~~~~ll~~D~~~~- 381 (540) T protein:vir:41 305 IAAAHMIDPYRLGITDVGPLGGNFAEVARRTYYESVVRPQQEIVSSVLTDFIQLKLD--PGARFVFNEEILMESEFVHN- 381 (540) T ss_pred HHHHhCCCHHHcCcccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC--CceEEEecchhhcchHHHHH- Confidence 999999999999987654 5789999999999999999999999999999987543 47899999999999876554 Q ss_pred HHHHHHHhCCCcCHHHHHHHhCCCCCCC-CCeEeeccCcccccccccccc--ccCCcc-----------cCCCCccC--- Q lcl|Aclame:pro 352 EYLKTLHETGVLNKDEIRELLERNPIEN-GDKYISSLNYVFLDFLEEYQR--LKAGGA-----------MKGGDNKN--- 414 (416) Q Consensus 352 ~~~~~~~~~g~~t~NE~R~~~gl~p~~g-gd~~~~~~n~~~~~~~~~~~~--~~~~~~-----------~~gge~~~--- 414 (416) +.+++++|+||+||+|+.+ +++|+ +|.+++|.|+...+....... .++..+ .++..++. T Consensus 382 --~~~lv~~G~lT~NE~Re~L--~g~e~gdd~~l~p~n~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 457 (540) T protein:vir:41 382 --YALLVQCGVLTPSEVREKL--FGLDGGPDMFMVPSSIGKSAMKRQKRNYEKNQINEIKRTYAKYKPRIQEIISSESPL 457 (540) T ss_pred --HHHHHhCCCCCHHHHHHHh--CcCcCCCcccccccccccccccccccccCCCCccccccccchhcccccCcccccccc Confidence 5578999999999999854 44444 466788888765443222111 000000 00000000 Q ss_pred --------CC Q lcl|Aclame:pro 415 --------EG 416 (416) Q Consensus 415 --------~~ 416 (416) ++ T Consensus 458 ~~~~~~~~~~ 467 (540) T protein:vir:41 458 EDKKKKIDEV 467 (540) T ss_pred cccccccccc Confidence 00 No 86 >protein:vir:4156 Length: 542 # NCBI annotation: portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:87 # MgeName: psiM2 # Cross-refs: genbank:acc:NP_046965;genbank:gi:9630535;genbank:GeneID:1261709 Probab=100.00 E-value=6.5e-72 Score=410.87 Aligned_cols=394 Identities=13% Similarity=0.033 Sum_probs=291.4 Q ss_pred cchhhhcccccccc-----ccccchhHHHhhhcCccccccccccH----HHHhccHHHHHHHHHHHHhhccCcceEEeec Q lcl|Aclame:pro 2 LLERMFEKRSGSSD-----HEDGFNNILLNMFGGRKTASGERVSE----SNSLVQPDIFACVNVLSDDIAKLPIHTYKRT 72 (416) Q Consensus 2 ~~~~~f~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~----~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 72 (416) +|+..|.-|+.... ............++. ....+++. +.+..+++|++||++||+++|++||+++..+ T Consensus 1 ~~~~~~~i~s~~~~~~i~~~~~~s~~~~~~~~~~---~~~pp~~~~~la~l~~~n~~v~scI~~ia~~IA~l~~~~~~~~ 77 (542) T protein:vir:41 1 MFNYHLSIRSLEKYKAIKREEVESQALGETRFEE---YVEPKVNPLVLLSLLQVNPYHASACSIKANDIIRTGYILEGDD 77 (542) T ss_pred CccccccccccccchhhhhccccccccccccCCc---cccCCCCHHHHHHHHhhcHHHHHHHHHHHHHHhhCceeeeccc Confidence 44555554432221 111111111111111 11122333 3344689999999999999999999997533 Q ss_pred CCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEE-- Q lcl|Aclame:pro 73 DGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLW-- 150 (416) Q Consensus 73 ~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~-- 150 (416) .. .++...||++||+.+||+.++.+++++||||+++.|+..|++.+|+|++|++|++..+.++...+ T Consensus 78 ~~-----------~l~~~lpN~~~s~~~f~~~~v~~lll~Gnayi~i~rd~~G~~~~L~~l~~~~v~v~~d~~~~~~~~~ 146 (542) T protein:vir:41 78 EG-----------VVDEFIRACKPSFEYVLLRALEDLQVFNYCTLEVVRDDRGDPIRFEYIPSHTIRVHKDGSRYRQTWD 146 (542) T ss_pred ch-----------hhhhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCcceEEEEcCCeeEeeec Confidence 21 23344599999999999999999999999999999999999999999999999998765432211 Q ss_pred -------EEEe--------eCCeeEEechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccee Q lcl|Aclame:pro 151 -------YQTV--------LNGKAIELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGI 214 (416) Q Consensus 151 -------~~~~--------~~~~~~~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v 214 (416) ..+. .+.....+++++|||+|+++ .++++|+||+..+..++....++.+++.++|+||++|+++ T Consensus 147 ~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~eIiHir~~~~~~~~~Glspi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~gI 226 (542) T protein:vir:41 147 GVNITHFKDYRYEGEINPETGEDQDSVGANELVFIHIPSPVCSYYGVPRYVSAAPAILAMQKIDEYNYAFFDNYTIPSYV 226 (542) T ss_pred CCcceeEEeecccccccccccccccccCcccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEE Confidence 1111 01122357889999999876 5789999999999999999999999999999999999999 Q ss_pred eccCC----------cCCHHHHHHHHHHHHHhh-----cCCceeec------CCCceeEeccCChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 215 LKVPA----------FLDEKPKENVRKEWKRVN-----KVENIAII------DYGLEYQSISMPLQEAQFVESMKFNKAQ 273 (416) Q Consensus 215 ~~~~~----------~~~~e~~~~~~~~~~~~~-----~~~~~~vl------~~g~~~~~~~~~~~d~~~~e~~~~~~~~ 273 (416) +++++ ..++++.+++++.|++.+ ++|+++|| ++|++|++++++++|++|+|.+++++++ T Consensus 227 L~~~~~l~de~~~~~~~~~e~~~~lk~~~~~~~~g~~~n~gk~~vL~~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~~~ 306 (542) T protein:vir:41 227 ITVTGEFEDELEEDPDGNPTGRTVIQALIEDNFKHLKEAPHTPLVFSIPGGDTVKVTFTPLNTSQKELSFREYAAEKKYD 306 (542) T ss_pred EEeCCccccccccccccCHHHHHHHHHHHHHHHhhhhcccCceeEeeccCCcccceeEEEcCCChhHHHHHHHHHHHHHH Confidence 98864 357888999999887653 45778888 4799999999999999999999999999 Q ss_pred HHHHhccchhhcccccCCC--cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHH Q lcl|Aclame:pro 274 ISMIYKVPLHKLNELDKAT--FSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQA 351 (416) Q Consensus 274 Ia~~~gvp~~~lg~~~~~~--~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~ 351 (416) ||++|||||.+||..+.++ +++.|+++..|+++||.|+++.|+++||++|++..+ .+++++|+.+.+++.|..+ T Consensus 307 Ia~afgVPp~~lG~~~~~t~n~sn~Eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~--~~~~~~f~~~~ll~~d~~~-- 382 (542) T protein:vir:41 307 IAAAHMIDPYRLGIADTGPLGGNFAEVTRRTYYESVVRPQQNIISSILTDFFQVKFN--PKTRFKFNDETLLESDSVR-- 382 (542) T ss_pred HHHHhCCCHHHhCcCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--CceEEEecchhhcchHHHH-- Confidence 9999999999999887664 589999999999999999999999999999988755 3678999999998877544 Q ss_pred HHHHHHHhCCCcCHHHHHHHhCCCCCCCCC-eEeeccCccccccccc---cccc----cCCcccCCCCccCCC Q lcl|Aclame:pro 352 EYLKTLHETGVLNKDEIRELLERNPIENGD-KYISSLNYVFLDFLEE---YQRL----KAGGAMKGGDNKNEG 416 (416) Q Consensus 352 ~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd-~~~~~~n~~~~~~~~~---~~~~----~~~~~~~gge~~~~~ 416 (416) .+..++++|+||+||+|+.+ +++|+|| .+++|.|......... .+.. .+....++++..+++ T Consensus 383 -~~~~~v~~GilT~NE~Re~L--~g~~pgdd~~l~p~~~~~~~~~~~~~n~~~~~~~~~~k~~~k~~~~~~~~ 452 (542) T protein:vir:41 383 -NCALLVQSGVLTPAEARERL--FGLDGGPDIFMVPSKGAAKSVKRQERNYEKNQIREIRKIYAKYRPRFNEI 452 (542) T ss_pred -HHHHHHhCCCCCHHHHHHhh--CCCCCCCccccccccccccccccCCcCCCCCchhhhhhcccccCcccccc Confidence 45678999999999999853 4444444 5556766543221111 0100 011122233323322 No 87 >protein:vir:99452 Length: 651 # NCBI annotation: hypothetical protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:1595 # MgeName: BJ1 # Cross-refs: genbank:acc:YP_919077;genbank:gi:119757035;genbank:GeneID:4606105 Probab=100.00 E-value=1.1e-69 Score=398.74 Aligned_cols=412 Identities=14% Similarity=0.118 Sum_probs=305.8 Q ss_pred Ccchh-hhcc---ccc----------cccccccchhHHHhhhcCccccccccccH---HHHh-ccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MLLER-MFEK---RSG----------SSDHEDGFNNILLNMFGGRKTASGERVSE---SNSL-VQPDIFACVNVLSDDIA 62 (416) Q Consensus 1 m~~~~-~f~~---~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~a~-~~~~v~~~i~~ia~~ia 62 (416) |--.+ -.+. +.. +........+.+... ...-..++++ .... .++++++||+.+++.|| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~L~~~~e~~~~~~~~i~~~~~~ia 76 (651) T protein:vir:99 1 MTDTTGETQETKVHVEGLGGEADLAKSPNSTQIPDHRIQSH----NVGVNPPYNPDRLAAFLELNETLATGIRKKSRYEV 76 (651) T ss_pred CCCccceeeeeEEEeecccccccccccccccccchhhhccc----CCCCCCCCCHHHHHHHHhcChHHHHHHHHHhhhhh Confidence 32221 0000 000 000111111111111 1111122222 2333 48999999999999999 Q ss_pred cCcceEEeecC-C----cc--e------eeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEE Q lcl|Aclame:pro 63 KLPIHTYKRTD-G----GI--E------RKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEA 129 (416) Q Consensus 63 ~~~~~~~~~~~-~----~~--~------~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~ 129 (416) +++|.+....+ + +. . ....++.+..+...+|+.+|+.++++.++.|++.+|++|+.+.++..|+|.. T Consensus 77 g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~~t~~~i~~~~~~Dle~tGna~ieiIrn~~g~pv~ 156 (651) T protein:vir:99 77 GFGFDLVPAQGVDGDDASDAQREVARNFWRGRSSRWQTGPNQAKTPATPERVKELARQDYHGVGWLALEMLTDIEGRPVG 156 (651) T ss_pred ccCceeeecccCCCCccchHHHHHHHHHhhccchhhcccccccCCCCCHHHHHHHHHHHHHHHhhHhhhhhhcCccchhh Confidence 99999875321 1 10 0 0123455666777889999999999999999999999999999999999999 Q ss_pred EEeeccceEEEEEcCCC--------------------------------cEEE--------------------------- Q lcl|Aclame:pro 130 LFPLRPDYTNAYVHPTT--------------------------------GMLW--------------------------- 150 (416) Q Consensus 130 l~~l~p~~v~~~~~~~~--------------------------------~~~~--------------------------- 150 (416) +++++++.+++..+... ..++ T Consensus 157 L~~lp~~~~Rv~~~~~~~~~~~~~ll~~~pn~~~~~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~ 236 (651) T protein:vir:99 157 LAYVPARTVRVRRPQNRFDQPRHPEEGRYVDGDVADIASRGYVQIRNGNRRYFGEAGDRYRGQEVVIDESGDEPTIRYRE 236 (651) T ss_pred hhhcChhheeeecccccccchhhhhhhcccccccchhHHHHHHHHHhcCcceEEEeeccccceeeeeccCCcceeEEecc Confidence 99999987765432100 0000 Q ss_pred -----------------EEEeeCCeeEEechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Q lcl|Aclame:pro 151 -----------------YQTVLNGKAIELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPR 212 (416) Q Consensus 151 -----------------~~~~~~~~~~~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~ 212 (416) +.+...+....+++++|||||+++ .++++|+||+..+..++..+.++++++.++|+||++|+ T Consensus 237 d~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~eViHir~~~~~~g~~G~spl~~a~~~i~~a~~a~~~~~~~f~NG~~p~ 316 (651) T protein:vir:99 237 DEESEREPIFVDRETGDVTTGDANGLENRPANELIFIPNPSILEDDYGVPDWVSAIRTISADEAAKDYNRDFFDNDTIPR 316 (651) T ss_pred CcceeeeeecccceeeeEEEcCCCceeEecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCc Confidence 001112234467899999999886 58899999999999999999999999999999999999 Q ss_pred eeeccCC-cCCHHHHHHHHHHHHHhh-cCCceeecCC-----------CceeEeccCCh-hhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 213 GILKVPA-FLDEKPKENVRKEWKRVN-KVENIAIIDY-----------GLEYQSISMPL-QEAQFVESMKFNKAQISMIY 278 (416) Q Consensus 213 ~v~~~~~-~~~~e~~~~~~~~~~~~~-~~~~~~vl~~-----------g~~~~~~~~~~-~d~~~~e~~~~~~~~Ia~~~ 278 (416) +++++++ .+++++.+++++.|++.. ++|+++||+. |++|++++.++ +|+||+|++++++++||++| T Consensus 317 gil~~~~~~ls~e~~~~lr~~~~~~~~nagk~~vL~~~~~~~~~~~~~g~~~~pls~~~~~D~qfle~r~~~~~eIa~af 396 (651) T protein:vir:99 317 MVIKVTGGELSEESKRDLRQMLNGLREESHRAVVLEVEKFQSQLDEDVEIELEPMGQGISEEMDFRQFREKNEHEIAKVL 396 (651) T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHhccCCceEEeecccccccccccCCceEEEcCcCchhhHHHHHHHHHHHHHHHHHh Confidence 9999864 699999999999998754 5678888865 99999999877 59999999999999999999 Q ss_pred ccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhccccc--chhhhhhhhhhccHHHHHHHHHH Q lcl|Aclame:pro 279 KVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGH--YVKFNIDSELRGDSKTQAEYLKT 356 (416) Q Consensus 279 gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~--~~~f~~~~l~~~d~~~~~~~~~~ 356 (416) ||||.+||..+++|+||+|++.+.|+++||.|+++.||++||++|++..+...++ +++|+.+.+++.|.+++++.+.. T Consensus 397 gVPp~~lG~~~~~~~sn~E~~~~~f~~~tL~P~~~~ie~eln~kLl~~~e~~~~~~i~~ef~~~~llr~D~~~~~e~~~~ 476 (651) T protein:vir:99 397 EVPPVKIGVTDSANRSNSDQQDKDFALEVIQPEQHTFAEWLYQIIHQQALGVTDWTIEYELRGADQPKQEAQLAEQRVRA 476 (651) T ss_pred CCCHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCceEEEEeccchhhhccHHHHHHHHHH Confidence 9999999999999999999999999999999999999999999999988776654 56777888999999999999999 Q ss_pred HHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCcccccccccccc----ccCCcccCCCCccCCC Q lcl|Aclame:pro 357 LHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQR----LKAGGAMKGGDNKNEG 416 (416) Q Consensus 357 ~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~----~~~~~~~~gge~~~~~ 416 (416) ++++|+||+||+|+++||||+++ ||..+.+.+....+....... ...++..+.++.+.+. T Consensus 477 ~i~~G~~T~NE~R~~lglppi~~~~gd~~l~~~~~~~~g~~~~gge~~~~~~~~~~~~~~~~e~~~ 542 (651) T protein:vir:99 477 MRLAGVGLVDEAREELGLDPLGEPYGEMTLSEFEAEVAGDVAGGGETEAVHEPPEENKIGEREWDT 542 (651) T ss_pred HHhCCCcCHHHHHHHhCCCCCCCccccccccccccccccccccCCCCcccccCccccccccchhhh Confidence 99999999999999999999964 898888877655443221111 0011111112221111 No 88 >protein:vir:79772 Length: 648 # NCBI annotation: portal protein # Family: family:all:3222 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429612;genbank:gi:156564103;genbank:GeneID:5525537 Probab=100.00 E-value=5.7e-68 Score=389.24 Aligned_cols=409 Identities=12% Similarity=0.062 Sum_probs=286.8 Q ss_pred Ccchhh---hccccc------------------------------ccccccc----chhHHHhhhcCccccccccccH-- Q lcl|Aclame:pro 1 MLLERM---FEKRSG------------------------------SSDHEDG----FNNILLNMFGGRKTASGERVSE-- 41 (416) Q Consensus 1 m~~~~~---f~~~~~------------------------------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-- 41 (416) =||+|+ |++.+. ..++... .........++.......+++. T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~d~~~~~~~r~g~~~~~~~~g~~~~~epp~d~~~ 88 (648) T protein:vir:79 9 GFWSRISLMWRDEDDDKEPLVLEESMQLGEAPGAMPKGGGGGGSAKRDPKMSLVKRIGLAIMDGGGGGRDFEEPEFDFNE 88 (648) T ss_pred hhhhhhhhhccCccccccccccccccccCCCccccCCCCcccccccccchhHHHHHhHHHHHhhcCCccccccCCcCHHH Confidence 222211 110000 0111111 1112222222222111122222 Q ss_pred --HHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEE Q lcl|Aclame:pro 42 --SNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYI 119 (416) Q Consensus 42 --~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i 119 (416) +.+..+|.|++||++||.++|+++|.++..+++. +++....+++.+||++||+++||+.++.+++++||+|+++ T Consensus 89 l~~l~~~np~V~~aI~iia~~ia~l~~~i~~~~~~~----~~~~~~~~ll~rPn~~~t~~~f~~~l~~~lll~GNAYvei 164 (648) T protein:vir:79 89 ITSAYNTEGYVRQAVDKYIEMMFKADWDFVSKNPNA----VEYIRMRFTLMAEATQIPTNQLFIEIAEDLVKYCNVVIAK 164 (648) T ss_pred HHHHHhcChHHHHHHHHHHHHHhhCcceEEecCCcc----chhhHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCeEEEE Confidence 3445799999999999999999999987654332 2223345566899999999999999999999999999999 Q ss_pred eecCCCc---------------EEEEEeeccceEEEEEcCCCcEEEEEEeeCC--eeEEechhheeeeccC-CCCccccc Q lcl|Aclame:pro 120 QFGSHGY---------------PEALFPLRPDYTNAYVHPTTGMLWYQTVLNG--KAIELYDYEVLHFKGL-STDGIHGK 181 (416) Q Consensus 120 ~r~~~g~---------------~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vih~~~~-~~~~~~G~ 181 (416) .|+..|. +.++||++|.+|++..+.++...+|.+...+ ..+.+++++|||++++ +.++++|+ T Consensus 165 iRd~~G~~~~~l~~~~~~~~~~v~~l~pl~p~~v~v~~d~~g~~~~Y~y~~~g~~~~~~~~~~dIIHik~~~~~d~~~Gl 244 (648) T protein:vir:79 165 SRAKDALPFQGMNVMGVGDSMPVAGYFPLNLASMKVKRDKFGMIKGWQQEQEGQDKPQKFKPEDIVHIYYKREKGRAFGT 244 (648) T ss_pred EecCCCccchhhhhhhhccccceeeeEeecCceeEEEEcCCCceeeeEEEecCCceeEEecCccEEEEccCCCCCCceec Confidence 9998873 4789999999999999998888777765443 4567899999999965 56889999 Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEecc----C Q lcl|Aclame:pro 182 SPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSIS----M 256 (416) Q Consensus 182 s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~----~ 256 (416) ||+..+.+++....++.++..++|+||++|+++++++ .....+..+++++.|.+..++ ..+.++++++..+. . T Consensus 245 Spi~~a~~aI~l~~aa~~~~~~fF~NGa~P~gil~~~~~~~~~e~~k~~~e~~~~~~~~--~~i~gg~v~~~~~~i~~~~ 322 (648) T protein:vir:79 245 PWLLPALDDIRALRQVEENVLRLVYRNLHPLWHVKVGLEQEGFGAEEGEVDLVRGEVEN--MDVEGGMVTTERVNISSIA 322 (648) T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCccchHHHHHHHHHHHHhccc--ccccccccccceeeccccC Confidence 9999999999999999999999999999999999875 334556667777777766543 22333444433332 2 Q ss_pred ChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----Cchhc--- Q lcl|Aclame:pro 257 PLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLF----LDHDQ--- 329 (416) Q Consensus 257 ~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~----~~~~~--- 329 (416) +++|+|+++.+++++++||++|||||.+||..+++++++.+++.. ++..+|.|++..++..++.++. ..... T Consensus 323 s~~dlqfle~rk~~~~eIa~aFgVPP~lLG~~~~ss~stae~~~~-~~~~~i~~l~~~i~~~le~~~~~~ll~e~~l~~~ 401 (648) T protein:vir:79 323 SNQIIDAKEYLKHFEQRAFTVLGVSELMMGRGGTASRSTGDNLSS-DFKDRIKALQKVMATFINEFMVKEILMEGGFDPV 401 (648) T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCHhHcccCCCccchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 568999999999999999999999999999988888888877664 4567788888777666655432 21111 Q ss_pred -ccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC-eEeeccCccccccccccc---cccC- Q lcl|Aclame:pro 330 -KSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD-KYISSLNYVFLDFLEEYQ---RLKA- 403 (416) Q Consensus 330 -~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd-~~~~~~n~~~~~~~~~~~---~~~~- 403 (416) ...++++|+++++++.|.+++++.+.+++++|+||+||+|+++||||+|+|+ ..++..++.+........ ..+. T Consensus 402 l~~d~~ieF~~~~Llr~D~~~~a~~~~~l~~~GilT~NEaR~~lGlpPi~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 481 (648) T protein:vir:79 402 LNPDDKVEFRFNEIDMDSKIKLENQAVFLYEHNAISEDEMRELIGRDPVDDGEGRAKMHLQMVTIAQATALAALAPTPAG 481 (648) T ss_pred ccccceEEEeecccchhhHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCccccccccccchhccccccCCCCCCC Confidence 1235689999999999999999999999999999999999999999999875 345555555443221111 0000 Q ss_pred ----CcccC--CCCccCCC Q lcl|Aclame:pro 404 ----GGAMK--GGDNKNEG 416 (416) Q Consensus 404 ----~~~~~--gge~~~~~ 416 (416) +...+ ..|.+++. T Consensus 482 ~~~~~a~~eg~~~e~~~~~ 500 (648) T protein:vir:79 482 GSSASASGDKKKKATDNKT 500 (648) T ss_pred CCCCCccccccccccCCCC Confidence 00000 01111111 No 89 >protein:vir:78641 Length: 278 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1855 # MgeName: tp310-2 # Cross-refs: genbank:acc:YP_001429941;genbank:gi:156603995;genbank:GeneID:5525387 Probab=100.00 E-value=1.8e-64 Score=370.12 Aligned_cols=275 Identities=21% Similarity=0.361 Sum_probs=254.7 Q ss_pred hccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEE Q lcl|Aclame:pro 61 IAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNA 140 (416) Q Consensus 61 ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~ 140 (416) ||++||++++.++. .+|+++++|+.+||++||+.+||+.++.+++++||||++++|+..|++.+|+|++|++|++ T Consensus 1 ia~l~~~~~~~~~~-----~~~~l~~lL~~~PN~~~t~~~f~~~~~~~ll~~Gna~~~i~r~~~G~~~~l~~l~~~~v~v 75 (278) T protein:vir:78 1 MASLPLKMYEDYKV-----VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEM 75 (278) T ss_pred CccceeEEEecCcc-----cccHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCCEEEEEEECCCCcEEEEEEECCceeEE Confidence 99999999986543 5689999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCCCcEEEEEEeeC-CeeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC Q lcl|Aclame:pro 141 YVHPTTGMLWYQTVLN-GKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP 218 (416) Q Consensus 141 ~~~~~~~~~~~~~~~~-~~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~ 218 (416) ..+.+++..+|.+... +..+.+++++|||++++ +.++++|+|++..+..++....++.+++...+ +..|+++++.+ T Consensus 76 ~~~~~~~~~~y~~~~~~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~i~~~~ 153 (278) T protein:vir:78 76 LIENQSRELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEM--QKPDSFMLKYG 153 (278) T ss_pred EEcCCCceEEEEEEcCCceEEEEccccEEEECCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHh--cCCCcEEEEeC Confidence 9999888887776544 46678999999999977 56789999999999999999999998876544 44589999999 Q ss_pred CcCCHHHHHHHHHHHHHhh-cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHH Q lcl|Aclame:pro 219 AFLDEKPKENVRKEWKRVN-KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIE 297 (416) Q Consensus 219 ~~~~~e~~~~~~~~~~~~~-~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e 297 (416) +.+++++.+++++.|++.. ++|+++++++|++|++++++++|+++.|.+++++++||++|||||.++|..+++|++|++ T Consensus 154 ~~l~~e~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~sn~~ 233 (278) T protein:vir:78 154 SNVGKEKRQQVLEDFKQYYEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNE 233 (278) T ss_pred CCCCHHHHHHHHHHHHHHhccCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHH Confidence 9999999999999998765 567899999999999999999999999999999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhh Q lcl|Aclame:pro 298 HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSE 342 (416) Q Consensus 298 ~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l 342 (416) ++.+.|++.||+|+++.|+++||++||++.++..|++++||++.| T Consensus 234 ~~~~~~~~~~l~P~~~~i~~~ln~~L~~~~e~~~g~~~~f~~~~l 278 (278) T protein:vir:78 234 ELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKIGILNLTLNLI 278 (278) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhcCCceEEEecccC Confidence 999999999999999999999999999999999999999999999 No 90 >protein:vir:79150 Length: 368 # NCBI annotation: bacteriophage gpQ # Family: family:all:196 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165254;genbank:gi:145708079;genbank:GeneID:5247161 Probab=100.00 E-value=7.6e-54 Score=311.79 Aligned_cols=333 Identities=13% Similarity=0.118 Sum_probs=243.5 Q ss_pred Ccchhhhcccccccc---ccccc----------hhHHHhhhcCc-c--cccccccc-------HHHHhccHHHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSD---HEDGF----------NNILLNMFGGR-K--TASGERVS-------ESNSLVQPDIFACVNVL 57 (416) Q Consensus 1 m~~~~~f~~~~~~~~---~~~~~----------~~~~~~~~~~~-~--~~~~~~~~-------~~~a~~~~~v~~~i~~i 57 (416) |-=++ +++...+. ..... ...-..+|+.+ + ...+..++ ...+++.|.-+.|+..+ T Consensus 1 m~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~la~~ 78 (368) T protein:vir:79 1 MSRNK--TRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARS 78 (368) T ss_pred CCccc--cccchhccCcccccccccCcchhhccccCceEEEEcCCceeecchhhHHHHHHHHhccchhccCcCHHHHHHH Confidence 44221 11110000 00000 00001111111 1 00010000 01122223333443333 Q ss_pred HHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccce Q lcl|Aclame:pro 58 SDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDY 137 (416) Q Consensus 58 a~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~ 137 (416) .+.-+ ..+.....+|+++. ++.+||++||+.+|++ ++.+++++||+|++++|+..|++++|+|++|.+ T Consensus 79 ~~~~~----------~h~~~~~~~~n~l~-l~~~Pn~~~t~~~f~~-l~~d~ll~Gnay~~~~r~~~G~~~~L~~l~~~~ 146 (368) T protein:vir:79 79 FRAAA----------HHSSAVYVKRNILV-STFIPHPLLSRATFER-LVLDWQVFGNAYLERRENVLGGTIRLDTPLAKY 146 (368) T ss_pred Hhhcc----------ccchhhhhhcchhh-hhcCCCcCCCHHHHHH-HHHHHhhcCCeEEEEEEcCCCCEEEEEEeCccc Confidence 22211 11233345677665 5579999999999976 678999999999999999999999999999999 Q ss_pred EEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeec Q lcl|Aclame:pro 138 TNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILK 216 (416) Q Consensus 138 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~ 216 (416) |++..+ ++. ++++..++..+.|++++|||+|.++ .++++|+||+..+..++.+..++..+..++|+||++|+++++ T Consensus 147 v~~~~~--~~~-~~~~~~~~~~~~~~~~dIihir~~~~~~~~yGlsp~~~a~~si~l~~aa~~~~~~~~~NGa~~~gil~ 223 (368) T protein:vir:79 147 VRRGLD--LNT-YFFVQNWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILY 223 (368) T ss_pred ceeecc--CCE-EEEEecCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEE Confidence 987654 333 3444566778899999999999876 568999999999999999999999999999999999999998 Q ss_pred cC-CcCCHHHHHHHHHHHHHhh---cCCceeec-----CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhccc Q lcl|Aclame:pro 217 VP-AFLDEKPKENVRKEWKRVN---KVENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNE 287 (416) Q Consensus 217 ~~-~~~~~e~~~~~~~~~~~~~---~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~ 287 (416) .+ ..+++++.+++++.|++.. |+++++|+ ++|++|++++.+++|++|.|.+++++++||++|||||.++|+ T Consensus 224 ~~~~~l~~e~~~~lk~~~~~~~G~~N~g~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi 303 (368) T protein:vir:79 224 MTDAAQKQEDVDTLREAMKSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGI 303 (368) T ss_pred eCCCCCCHHHHHHHHHHHHHhcCCcccCceeEecCCCCccceeEEEcCCCHHHHHHHHHHHHhHHHHHHHhCCCHHHccc Confidence 76 5799999999999998643 56788888 678999999999999999999999999999999999999998 Q ss_pred ccCC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHH Q lcl|Aclame:pro 288 LDKA--TFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLH 358 (416) Q Consensus 288 ~~~~--~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~ 358 (416) .+++ +++|+|++.+.|+++||.|+++.|+ ++|.+|.. ..++|+...|++.|.++++....+-. T Consensus 304 ~~~~t~~~sn~e~~~~~f~~~~l~Pl~~~ie-~ln~~l~~-------e~~rF~~~~l~~~D~~a~a~~~~rsa 368 (368) T protein:vir:79 304 IPNNTGGFGDVEKAAMVFARNEVKPLQDRLL-AINDWIGD-------EVVRFAPYALGGHDQPAAAPGGQRSA 368 (368) T ss_pred cCCCCCccccHHHHHHHHHHHHHHHHHHHHH-HHHhccCc-------ceeeechhHhhcccccccCCcccccC Confidence 7664 5899999999999999999999998 67776532 25899999999999988887433322 No 91 >protein:vir:267 Length: 348 # NCBI annotation: putative capsid portal protein # Family: family:all:196 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536647;genbank:gi:17975125;genbank:GeneID:929081 Probab=100.00 E-value=1e-52 Score=305.68 Aligned_cols=323 Identities=12% Similarity=0.054 Sum_probs=231.3 Q ss_pred Ccchhhhcccc--ccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhc---cCcceE------E Q lcl|Aclame:pro 1 MLLERMFEKRS--GSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIA---KLPIHT------Y 69 (416) Q Consensus 1 m~~~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia---~~~~~~------~ 69 (416) |- +... ..+.... . ..+|+.+. .++..+...+++.|+.++..... ..|+.. + T Consensus 1 ~~-----~~~~~~~~~~~~~---~--~~~~~~~~-------~p~~~~~~~~~~~~~~~~~~~~~~~~epp~~~~~La~l~ 63 (348) T protein:vir:26 1 MT-----EQLIHSHTTDGTE---S--KSVYSFDP-------NPEPVDTNSWMTRYCELFYNDFDDYWEPPISLKGLAEIA 63 (348) T ss_pred CC-----ccccchhhccccC---C--ceEEEecC-------CCeeecCcchHHHHHHHHhcCCCccccCCCCHHHHHHHH Confidence 22 1100 0000000 0 01111110 01112233344555555543322 223211 1 Q ss_pred eecCCcceeeeccchh-hhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcE Q lcl|Aclame:pro 70 KRTDGGIERKPEHKSA-HAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGM 148 (416) Q Consensus 70 ~~~~~~~~~~~~~~~~-~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~ 148 (416) +...-. ...+.-... ..-..+||++||+.+|++. +.+++++||||+++.|+..|++++|+|++|.+|++..+ +. T Consensus 64 ~~n~~h-~~~i~~k~N~l~~~~~Pn~~~t~~~f~~~-~~d~ll~Gnay~~~~rn~~G~~~~L~~l~~~~v~~~~d--~~- 138 (348) T protein:vir:26 64 NANGYH-GSLLKARANYVAGRFMNGGGLPMYKMNSA-CWDYFGLGMSAFVKIRSYLKNVIALEPLPMVHMRKRKN--GD- 138 (348) T ss_pred hhhhhh-hhhHhhhhhHHhhcccCCCCCCHHHHHHH-HHHHHhcCCeEEEEEEcCCCcEEEEEEecCceeEeeec--Cc- Confidence 000000 000000000 0012379999999999765 56999999999999999999999999999999988754 32 Q ss_pred EEEEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcCCHHHH Q lcl|Aclame:pro 149 LWYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFLDEKPK 226 (416) Q Consensus 149 ~~~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~~~e~~ 226 (416) +|.+..++..+.|++++|+|++.+++ ++++|+|++..+.+++....++..+++++|+||++|++|+..+ ..++++++ T Consensus 139 -~~~~~~~g~~~~f~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il~~~~~~ls~e~~ 217 (348) T protein:vir:26 139 -FVQLLRNNEQKVFKAKDVIFIPQYDPQQQIYGLPDYLGSIQSSLLNRDATLFRRRYYLNGAHMGFIFYATDPNLSEADE 217 (348) T ss_pred -EEEEEecCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHH Confidence 34455667888999999999998765 6899999999999999999999999999999999999999865 57999999 Q ss_pred HHHHHHHHHhh---cCCceeec-----CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC--CCcccH Q lcl|Aclame:pro 227 ENVRKEWKRVN---KVENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK--ATFSNI 296 (416) Q Consensus 227 ~~~~~~~~~~~---~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~--~~~s~~ 296 (416) +++++.|++.. |.++++|+ ++|++++|++.+++|++|+|.+++++++||++|||||.++|+.++ +++++. T Consensus 218 ~~lk~~~~~~~G~~n~~~~~vl~~~g~~~Gi~~~pis~~~~d~qf~e~k~~t~~dIa~af~VPp~llGi~~~~~~~~sn~ 297 (348) T protein:vir:26 218 KALKEKIASSKGIGNFRSMFVNIPNGKEKGIQLIPVGDIATKDEFERIKNITAQDIFVGHRFPAGMGGMLPQQGANVPDP 297 (348) T ss_pred HHHHHHHHHhcCcccccceeEEcCCCCccceeEEEccCChhHHHHHHHHHhhHHHHHHHhCCCHHHccccCCCCCccccH Confidence 99999998764 44567887 789999999999999999999999999999999999999997544 689999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhh-hhccHHHH Q lcl|Aclame:pro 297 EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSE-LRGDSKTQ 350 (416) Q Consensus 297 e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l-~~~d~~~~ 350 (416) |++.+.|++++|.|+++.|+++||++|..+. +.+++||++.. .+.+..+. T Consensus 298 e~~~~~f~~~~l~P~~~~ie~~ln~~l~~~~----~~~~~fdl~~~~e~~~~~a~ 348 (348) T protein:vir:26 298 LKVSQVYDFYEVIPVCKRFMDAVNNDPEIPD----NLKLKFNLNPGVESANGSAV 348 (348) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCCCC----ccEEEEecCcccccchhhcC Confidence 9999999999999999999999999876443 34677777643 22222222 No 92 >protein:vir:103971 Length: 376 # NCBI annotation: pbsx family phage portal protein # Family: family:all:196 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293752;genbank:gi:72537722;genbank:GeneID:3608098 Probab=100.00 E-value=3e-52 Score=303.04 Aligned_cols=312 Identities=16% Similarity=0.136 Sum_probs=230.6 Q ss_pred Ccchhhhcccccccccccc--c-hhHHHhhhcCc-cc-------------------cccccccHHHH----hccHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDG--F-NNILLNMFGGR-KT-------------------ASGERVSESNS----LVQPDIFAC 53 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~--~-~~~~~~~~~~~-~~-------------------~~~~~~~~~~a----~~~~~v~~~ 53 (416) |-=.|-..+......+... . ...-..+|+.+ +. ....+++.... -.++...+| T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fg~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~La~~~~~~~~h~s~ 105 (376) T protein:vir:10 26 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA 105 (376) T ss_pred chhccCCCcccchhhhhHhhhccCcceeEEEEcCCceeccCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhHHhhhh Confidence 4322222111111100000 0 00000011100 00 00011111111 112222223 Q ss_pred HHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEee Q lcl|Aclame:pro 54 VNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPL 133 (416) Q Consensus 54 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l 133 (416) |...++.+++ ..+||++||+.+|++. +.+++++||+|++++|+..|++++|+|+ T Consensus 106 l~~k~n~l~~-------------------------~~~Pnp~lT~~~f~~~-v~d~ll~Gnay~~~~rn~~G~~~~L~pl 159 (376) T protein:vir:10 106 LFFKANVLAS-------------------------TFRPHRWLSRHAFERW-ALDFLTFGNGYLERRRNMVGGTLRLEPA 159 (376) T ss_pred HHHHhHHHHh-------------------------ccCCCCCCCHHHHHHH-HHHHHhcCCeEEEEEECCCCCEEEEEEe Confidence 3222222111 2479999999999854 5689999999999999999999999999 Q ss_pred ccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Q lcl|Aclame:pro 134 RPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPR 212 (416) Q Consensus 134 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~ 212 (416) +|.+|++..+.++ ++++...+..+.|++++|||++.+++ ++++|+|++..+..++....++..++.++|+||++|+ T Consensus 160 ~~~~vr~~~d~~~---~~~~~~~~~~~~~~~~eViHir~~~~~~~~yGls~~~~a~~si~l~~aa~~f~~~~f~NGa~pg 236 (376) T protein:vir:10 160 LAKYVRRKADFNG---FVYVNGWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAG 236 (376) T ss_pred CCcceEEEeeCCe---EEEEEcCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCc Confidence 9999999877543 33344566778899999999998764 6899999999999999999999999999999999999 Q ss_pred eeeccC-CcCCHHHHHHHHHHHHHh---hcCCceeec-----CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchh Q lcl|Aclame:pro 213 GILKVP-AFLDEKPKENVRKEWKRV---NKVENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLH 283 (416) Q Consensus 213 ~v~~~~-~~~~~e~~~~~~~~~~~~---~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~ 283 (416) +++..+ ..+++++.+++++.|++. .|+++++|+ ++|++|+|++.+++|+||.|.+++++++||++|||||. T Consensus 237 gIl~~~d~~l~~e~~~~lr~~~~~~~G~~N~~~~~vl~~~g~~~Gi~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~ 316 (376) T protein:vir:10 237 FILYMTDAAQKQDDVDNMRDALKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQ 316 (376) T ss_pred eEEEecCCCCCHHHHHHHHHHHHHhcCccccCceeEecCCCCccceEEEEccCCHHHHHHHHHHHHhHHHHHHHhCCCHH Confidence 999875 579999999999999864 345678887 57899999999999999999999999999999999999 Q ss_pred hcccccC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHH Q lcl|Aclame:pro 284 KLNELDK--ATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKT 349 (416) Q Consensus 284 ~lg~~~~--~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~ 349 (416) ++|..++ ++++|.|++.+.|+++||.|+++.|++ +|.+|.. ..++|+...|++.|.++ T Consensus 317 llGi~~~~t~~~sn~eq~~~~f~~~~L~Pl~~~iee-ln~~L~~-------~~~~F~~~~Llr~d~ka 376 (376) T protein:vir:10 317 LLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWLGE-------EVVRFDDYEIPPAPVAA 376 (376) T ss_pred HhcccCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhccc-------cccccChhHhhcccccC Confidence 9998765 468999999999999999999999985 7876632 24899999999999988 No 93 >protein:vir:100328 Length: 346 # NCBI annotation: capsid portal protein Q # Family: family:all:196 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655469;genbank:gi:109289937;genbank:GeneID:4157371 Probab=100.00 E-value=5e-52 Score=301.82 Aligned_cols=323 Identities=13% Similarity=0.157 Sum_probs=234.5 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccc-cHHHHhccHHHHH----------HHHHHHHhhccCcceEE Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERV-SESNSLVQPDIFA----------CVNVLSDDIAKLPIHTY 69 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~~~v~~----------~i~~ia~~ia~~~~~~~ 69 (416) |- |. +++...+ ........-..+|+.+. ..+| +....+....+++ ...-+|+.+...+.+- T Consensus 1 m~--~~-~~~~~~~-~~~~~~~~~~~~~~~~~---p~~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~la~l~~~~~~h~- 72 (346) T protein:vir:10 1 MK--KQ-LRKNLTQ-NDRLQPQAQTEIFSFGD---PIPVLDRADILNYLECSAMYEKWYNPPMSFDGLAKSLRSSTHHE- 72 (346) T ss_pred CC--cc-cCCCCCc-ccccccccCeEEEecCC---cceecCchhHHHHHHHhhcCCceEecCCCHHHHHHHHHhhhhcc- Confidence 32 21 1111111 00000000111222111 0111 0000010000000 0111232222222221 Q ss_pred eecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEE Q lcl|Aclame:pro 70 KRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGML 149 (416) Q Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~ 149 (416) +......|.+.. ++.+||++||+.+|++ ++.+++++||||+++.|+..|++++|+|++|..|++..+.+ +.. T Consensus 73 -----~~i~~k~n~l~~-l~~~Pn~~~t~~~f~~-~~~d~ll~Gnay~~i~r~~~G~~~~L~pl~~~~v~~~~~~~-~~~ 144 (346) T protein:vir:10 73 -----SAIITKANILLS-TCEVDSRYLSRRDLSS-FVKDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAG-QFY 144 (346) T ss_pred -----hhhhhhhhhHHH-HHhCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCcEEEEEEecCCceEEEEcCC-eEE Confidence 111112344444 4468999999999987 56789999999999999999999999999999999877654 344 Q ss_pred EEEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcCCHHHHH Q lcl|Aclame:pro 150 WYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFLDEKPKE 227 (416) Q Consensus 150 ~~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~~~e~~~ 227 (416) ++.+..++..+.+++++|||+|.+++ ++++|+|++..+..++.+..++..++.++|+||++|+++++.+ ..+++++.+ T Consensus 145 ~~~~~~~g~~~~~~~~dIih~r~~~~~~~~~G~~~~~~a~~si~l~~~a~~~~~~~~~NG~~~~~il~~~d~~l~~e~~~ 224 (346) T protein:vir:10 145 YVPQRFDHQEHEFAKGSIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQKQEDVE 224 (346) T ss_pred EEEEccCCeEEEEecccEEEecCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCHHHHH Confidence 55555667788999999999998875 6899999999999999999999999999999999999999875 578999999 Q ss_pred HHHHHHHHhh---cCCceeecC-----CCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC--CCcccHH Q lcl|Aclame:pro 228 NVRKEWKRVN---KVENIAIID-----YGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK--ATFSNIE 297 (416) Q Consensus 228 ~~~~~~~~~~---~~~~~~vl~-----~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~--~~~s~~e 297 (416) ++++.|++.. |+++++|+. .|++++|++.+++|++|.|.+++++++||++|||||.++|..++ +++++.| T Consensus 225 ~i~~~~~~~~g~~n~~~~~vl~~~~~~~gi~~~pis~~~~d~qf~e~k~~~~~~I~~af~VPp~llG~~~~~~~~~s~~e 304 (346) T protein:vir:10 225 NIRQQLKQSKGVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSRDDVLAAHRVPPQLMGIIPNNTGGFGNVA 304 (346) T ss_pred HHHHHHHHhcCccccCceeEecCCCCccceeEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcccHH Confidence 9999998764 456788874 47899999999999999999999999999999999999998765 4689999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccH Q lcl|Aclame:pro 298 HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDS 347 (416) Q Consensus 298 ~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~ 347 (416) ++.+.|++++|.|+++.||+ ++.+|.. ..++|+...|++.|. T Consensus 305 ~~~~~f~~~~l~P~~~~iee-~n~~L~~-------e~i~F~~~~ll~~~~ 346 (346) T protein:vir:10 305 DAAEVFFITEIEPLQERLKE-FNQWLGQ-------EVIKFKPSKLLQRTQ 346 (346) T ss_pred HHHHHHHHHHHHHHHHHHHH-HHhhccc-------ceeeechhhhcccCC Confidence 99999999999999999986 6665532 258999999999999 No 94 >protein:vir:79207 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111036;genbank:gi:134288763;genbank:GeneID:4960726 Probab=100.00 E-value=2.9e-51 Score=297.68 Aligned_cols=312 Identities=15% Similarity=0.143 Sum_probs=228.5 Q ss_pred Ccchhhhcccccccccccc--c-hhHHHhhhcCcc---ccc-----------------cccccHHHHh----ccHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDG--F-NNILLNMFGGRK---TAS-----------------GERVSESNSL----VQPDIFAC 53 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~--~-~~~~~~~~~~~~---~~~-----------------~~~~~~~~a~----~~~~v~~~ 53 (416) |-=+|--+++.....+... . ...-..+|+.+. ..+ ..+++..... .++...+| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~~~~~h~~~ 80 (351) T protein:vir:79 1 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA 80 (351) T ss_pred CCCCCCCCCCCCCCCCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhHhhhhh Confidence 4322111111000000000 0 000001111000 000 0011111100 01111222 Q ss_pred HHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEee Q lcl|Aclame:pro 54 VNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPL 133 (416) Q Consensus 54 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l 133 (416) |...++.+ .-..+||++||+.+|++ ++.+++++||||++++|+..|++++|+|+ T Consensus 81 l~~k~n~l-------------------------~~~~~Pnp~~t~~~f~~-~v~d~ll~Gnay~~~~r~~~G~~~~L~~l 134 (351) T protein:vir:79 81 LFFKANVL-------------------------ASTFRPHRWLSRHAFER-WALDFLTFGNGYLERRRNMVGGTLRLEPA 134 (351) T ss_pred hhhhhhHH-------------------------hhcccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEe Confidence 21111111 11357999999999975 66799999999999999999999999999 Q ss_pred ccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Q lcl|Aclame:pro 134 RPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPR 212 (416) Q Consensus 134 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~ 212 (416) +|.++++..+.++ ++++...+..+.|++++|||+|.+++ ++++|+|++..+..++....++..+++++|+||++|+ T Consensus 135 ~~~~v~~~~~~~~---~~~~~~~g~~~~~~~~eIihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~NGa~pg 211 (351) T protein:vir:79 135 LAKYVRRKADFSG---FVYVNGWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAG 211 (351) T ss_pred CCcceeeeecCCe---EEEEecCceEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCc Confidence 9999998776553 34455566778899999999998865 6899999999999999999999999999999999999 Q ss_pred eeeccC-CcCCHHHHHHHHHHHHHhh---cCCceeec-----CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchh Q lcl|Aclame:pro 213 GILKVP-AFLDEKPKENVRKEWKRVN---KVENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLH 283 (416) Q Consensus 213 ~v~~~~-~~~~~e~~~~~~~~~~~~~---~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~ 283 (416) +++..+ ..+++++.+++++.|++.. |.++++|+ ++|++++|++.+++|++|.|++++++++||++|||||. T Consensus 212 ~il~~~~~~ls~e~~~~lk~~~~~~~G~~N~~~~~v~~~~g~~~gi~~~pl~~~~~d~ef~e~k~~s~~eI~~a~~VPp~ 291 (351) T protein:vir:79 212 FILYMTDAAQKQDDVDNMRDALKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQ 291 (351) T ss_pred eEEEecCCCCCHHHHHHHHHHHHHhcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHH Confidence 999875 5799999999999998653 45677877 57899999999999999999999999999999999999 Q ss_pred hcccccC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHH Q lcl|Aclame:pro 284 KLNELDK--ATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKT 349 (416) Q Consensus 284 ~lg~~~~--~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~ 349 (416) ++|..++ ++++|.|++.+.|+++||.|+++.||+ +|.+|. ...++|+...|++.|.++ T Consensus 292 llGi~~~~t~~~~n~e~~~~~f~~~~l~Pl~~~ie~-ln~~lg-------~~~~~F~~~~llr~d~~a 351 (351) T protein:vir:79 292 LLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWLG-------DEVVTFDDYEIPPAPVAA 351 (351) T ss_pred HhcccCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhcC-------cceeeeChhhhccccccC Confidence 9998765 468999999999999999999999985 776542 124899999999999988 No 95 >protein:vir:78191 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111155;genbank:gi:134288732;genbank:GeneID:4960651 Probab=100.00 E-value=3.9e-51 Score=296.95 Aligned_cols=312 Identities=15% Similarity=0.138 Sum_probs=228.3 Q ss_pred Ccchhhhcccccccccccc--c-hhHHHhhhcCcc---cc-----------------ccccccHHHHh----ccHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDG--F-NNILLNMFGGRK---TA-----------------SGERVSESNSL----VQPDIFAC 53 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~--~-~~~~~~~~~~~~---~~-----------------~~~~~~~~~a~----~~~~v~~~ 53 (416) |-=+|--+++.....+... . ...-..+|+.+. .. ...+++..... .++...+| T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~~~~~h~~~ 80 (351) T protein:vir:78 1 MSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSA 80 (351) T ss_pred CCCCCCCCCCCCCCCCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhccCceecCCCCHHHHHHHHhhhHhhhhh Confidence 4322111111000000000 0 000001111000 00 00111111110 11111222 Q ss_pred HHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEee Q lcl|Aclame:pro 54 VNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPL 133 (416) Q Consensus 54 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l 133 (416) |...++.+ .-..+||++||+.+|++ ++.+++++||+|++++|+..|++++|+|+ T Consensus 81 l~~k~n~l-------------------------~~~~~Pn~~~t~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl 134 (351) T protein:vir:78 81 LFFKANVL-------------------------ASTFRPHRWLSRHAFER-WALDFLTFGNGYLERRRNMVGGTLRLEPA 134 (351) T ss_pred hhhhhhHH-------------------------hhcccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEe Confidence 21111111 11357999999999975 55789999999999999999999999999 Q ss_pred ccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Q lcl|Aclame:pro 134 RPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPR 212 (416) Q Consensus 134 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~ 212 (416) +|.+|++..+.++ ++++...+..+.|++++|||++.+++ ++++|+|++..+..++....++..+++++|+||++|+ T Consensus 135 ~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~eVihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~NGa~pg 211 (351) T protein:vir:78 135 LAKYVRRKADFSG---FVYVNGWQERHEFAPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAG 211 (351) T ss_pred cCcceEEeeeCCe---EEEEecCCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCc Confidence 9999998876553 23344566778999999999998864 7899999999999999999999999999999999999 Q ss_pred eeeccC-CcCCHHHHHHHHHHHHHhh---cCCceeec-----CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchh Q lcl|Aclame:pro 213 GILKVP-AFLDEKPKENVRKEWKRVN---KVENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLH 283 (416) Q Consensus 213 ~v~~~~-~~~~~e~~~~~~~~~~~~~---~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~ 283 (416) +|+..+ ..+++++.+++++.|++.. |+++++|+ ++|++++|++.+++|+||.|.+++++++||++|||||. T Consensus 212 gIl~~~~~~ls~e~~~~lr~~~~~~~G~~N~~~~~v~~~~g~~~g~k~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~ 291 (351) T protein:vir:78 212 FILYMTDAAQKQDDVDNMRDALKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQ 291 (351) T ss_pred eEEEecCCCCCHHHHHHHHHHHHHhcCcccccceeeecCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHH Confidence 999875 5799999999999998643 55678887 47899999999999999999999999999999999999 Q ss_pred hcccccC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHH Q lcl|Aclame:pro 284 KLNELDK--ATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKT 349 (416) Q Consensus 284 ~lg~~~~--~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~ 349 (416) ++|..++ ++++|.|++.+.|++++|.|+++.|++ ++.+|.. ..++|+..+|++.|.++ T Consensus 292 llGi~~~~t~~~sn~e~~~~~f~~~~l~P~~~~iee-~n~~l~~-------~~~~F~~~~Llr~d~ka 351 (351) T protein:vir:78 292 LLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWLGD-------EVVRFDDYEIPPAPVAA 351 (351) T ss_pred HhcccCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhcCc-------cceecChhhhccccccC Confidence 9998765 458999999999999999999999995 6665532 25899999999999988 No 96 >protein:vir:98567 Length: 340 # NCBI annotation: gp1 # Family: family:all:196 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958056;genbank:gi:41057353;genbank:GeneID:2744238 Probab=100.00 E-value=8e-51 Score=295.24 Aligned_cols=316 Identities=17% Similarity=0.196 Sum_probs=230.0 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCc-c--cccccc-------ccHHHHhccHHHHHHHHHHHHhhcc--CcceE Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGR-K--TASGER-------VSESNSLVQPDIFACVNVLSDDIAK--LPIHT 68 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~-------~~~~~a~~~~~v~~~i~~ia~~ia~--~~~~~ 68 (416) |.=++ ++........... -...|+.+ + ...+.. .....+++.|.-+.++..+.+.-+. -++.. T Consensus 1 m~~~~---~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~la~l~~a~~~h~s~i~~ 75 (340) T protein:vir:98 1 MSKRK---PRKAVAMTASAPQ--KMEAFTFGEPVPVLDKRDILDYVECISNGKWYEPPVSFSGLAKSLRSAVHHSSPIYV 75 (340) T ss_pred CCCCC---CCccccccccCcc--ceeEEEcCCceeecCcchhhhhhhhhhcCceecCCCCHHHHHHHHHhccccchhhhh Confidence 55111 1111111000000 01111110 0 000000 0001122223323333333222221 11111 Q ss_pred EeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcE Q lcl|Aclame:pro 69 YKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGM 148 (416) Q Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~ 148 (416) .+ +-+. -..+||++||..+|++ ++.+++++||+|++++|+..|++++|+|+++.+|++..+ +. T Consensus 76 k~-----------n~l~--~~~~Pn~~lt~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~~--~~- 138 (340) T protein:vir:98 76 KR-----------NVLA--STYIPHPLLSRQDFSR-FALDYLVFGNAFLEQRHSVTGQLIKLLTSPAKYTRRGVD--DS- 138 (340) T ss_pred hh-----------hHHh--hccCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceEEEccc--Cc- Confidence 10 0111 1248999999999975 557999999999999999999999999999999887654 23 Q ss_pred EEEEEeeCCeeEEechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcCCHHHH Q lcl|Aclame:pro 149 LWYQTVLNGKAIELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFLDEKPK 226 (416) Q Consensus 149 ~~~~~~~~~~~~~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~~~e~~ 226 (416) .+|++..++..+.+++++|+|++.++ .++++|+|++..+..++....++..+++++|+||++|++++..+ ..+++++. T Consensus 139 ~~~~~~~~~~~~~~~~~eViHir~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~pg~il~~~~~~ls~e~~ 218 (340) T protein:vir:98 139 VFWFVENFTQPHEFAPDTVFHLLEPDINQEIYGLPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDPAQSATDV 218 (340) T ss_pred EEEEEecCCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHH Confidence 45666677788899999999999776 47899999999999999999999999999999999999999876 47999999 Q ss_pred HHHHHHHHHhh---cCCceeec-----CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC--CCcccH Q lcl|Aclame:pro 227 ENVRKEWKRVN---KVENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK--ATFSNI 296 (416) Q Consensus 227 ~~~~~~~~~~~---~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~--~~~s~~ 296 (416) +++++.|++.. |.++++|+ ++|++++|++.+++|+||.|++++++.+||++|||||.++|..++ ++++|. T Consensus 219 ~~lk~~~~~~~G~~n~~~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~~t~~~sn~ 298 (340) T protein:vir:98 219 ESLRDAMRNSKGLGNFKNLFFYSPNGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMGGKPENIGSLGDV 298 (340) T ss_pred HHHHHHHHHhcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcccCCCCCccccH Confidence 99999998643 45678887 578999999999999999999999999999999999999998765 468999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhcc Q lcl|Aclame:pro 297 EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGD 346 (416) Q Consensus 297 e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d 346 (416) |++.+.|+++||.|+++.||+ +|.+|..+ .++|+...|++.| T Consensus 299 e~~~~~f~~~~l~Pl~~~iee-~n~~L~~e-------~~rF~~~~l~~~d 340 (340) T protein:vir:98 299 EKVAKVFVRNELSPLQDRFRE-VNDWLGME-------VIRFKEYTLDNPE 340 (340) T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhccccc-------ccccCccccccCC Confidence 999999999999999999995 88776432 3789999999998 No 97 >protein:vir:78749 Length: 337 # NCBI annotation: putative portal protein # Family: family:all:196 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285643;genbank:gi:148727149;genbank:GeneID:5220095 Probab=100.00 E-value=1.4e-51 Score=299.43 Aligned_cols=317 Identities=12% Similarity=0.084 Sum_probs=234.1 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhc---cCcceEEeecCCcce Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIA---KLPIHTYKRTDGGIE 77 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia---~~~~~~~~~~~~~~~ 77 (416) |- |++........ ... ..+|+.+ .++..+...++..|+........ ..|+....-.+ -. T Consensus 1 m~-----~~~~~~~~~~~-~~~--~~~~~~~--------~p~~~~~~~~~~~~~~~~~~~~~~~~~pP~~~~~La~--l~ 62 (337) T protein:vir:78 1 MT-----KRQQQPAQAAA-SSP--RPSVVFS--------MPEAIDPTAWMTDYTGVFYNPYGEYYQPPIDRKGLAK--VA 62 (337) T ss_pred CC-----CcccCcccccc-cCc--eeEEEec--------CcccccCcchhHhhhhhhhccCcceecCCCCHHHHHH--Hh Confidence 43 22221111111 000 1112111 11112233344445554433222 33443221100 00 Q ss_pred eeeccchhhhhccccccccCHH----HHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEE Q lcl|Aclame:pro 78 RKPEHKSAHAVYARPNPYMTAF----TWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQT 153 (416) Q Consensus 78 ~~~~~~~~~~l~~~PN~~~s~~----~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~ 153 (416) +... .-...|..+||+.++++ ++++.++.+++++||||++++|+..|+|++|+|++|.+|++..+ +.. +| + T Consensus 63 ~~~~-~h~~~L~~k~N~~~~~f~~~~~~~~~~~~d~ll~GNay~~~~rn~~G~~~~L~pl~~~~v~~~~d--~~~-~~-~ 137 (337) T protein:vir:78 63 RANA-HHGAILMARRNMVAGRFTNQRATITAFVHNYLQFGDGGLLKLRNSFGQVVGLHPLSSVYLRRRED--GCF-VY-L 137 (337) T ss_pred hcch-hhhhHHHhhhccccccCcCcHHHHHHHHHHHHhhCCeEEEEEECCCCcEEEEEEeCCceeEeeeC--CeE-EE-E Confidence 0001 12346778999877654 78999999999999999999999999999999999999987654 332 33 3 Q ss_pred eeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC-cCCHHHHHHHHH Q lcl|Aclame:pro 154 VLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA-FLDEKPKENVRK 231 (416) Q Consensus 154 ~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~-~~~~e~~~~~~~ 231 (416) ..++..+.+++++|||+|.+++ ++++|+|++..+..++.+..++..+++++|+||++|++++..++ .+++++.+++++ T Consensus 138 ~~~~~~~~~~~~eIiHik~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~p~~il~~~~~~l~~e~~~~lk~ 217 (337) T protein:vir:78 138 QQGKPNLIYRPDDVIWLAQYDPEQQVYGMPDYLGGLQSALLNQDATLFRRRYFLNGAHMGFIFYATDPNMDDDTEEEMKE 217 (337) T ss_pred EcCCceEEECCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeEEcCCCCCCHHHHHHHHH Confidence 3456778999999999998875 68999999999999999999999999999999999999998764 799999999999 Q ss_pred HHHHhh---cCCceeec-----CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC---CCcccHHHHH Q lcl|Aclame:pro 232 EWKRVN---KVENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK---ATFSNIEHQS 300 (416) Q Consensus 232 ~~~~~~---~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~---~~~s~~e~~~ 300 (416) .|++.. |.++++|+ ++|++++|++.+++|+||+|++++++++||++|||||.++|...+ ++++|.|++. T Consensus 218 ~~~~~~G~~n~~~~~v~~~~g~~~Gi~~~pis~~~~d~qfle~k~~s~~eIa~a~~VPp~llGi~~~~~~~~~~n~e~~~ 297 (337) T protein:vir:78 218 MIANSKGVGNFRSMFVNIPDGKPDGIKLIPVGDIATKDEFAAIKGITAQDVLTAHRYPPALAGIIPTNGGGGLGDPEKYD 297 (337) T ss_pred HHHHhcCcccccceEEEcCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcccccCCCcCccccHHHHH Confidence 998653 44567776 578999999999999999999999999999999999999997554 5788999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhh Q lcl|Aclame:pro 301 IEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSEL 343 (416) Q Consensus 301 ~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~ 343 (416) +.|+++||.|+++.||+++|.++++.... ..++++...++ T Consensus 298 ~~f~~~~L~P~~~~ie~~~n~~ll~~~~~---~~f~~~~~~~~ 337 (337) T protein:vir:78 298 ATYARNEVLPLCELVQDAINSAGLPRALW---VTFRETIGAAV 337 (337) T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCChhhc---eeccccccccC Confidence 99999999999999999999988875433 24677777776 No 98 >protein:vir:1150 Length: 350 # NCBI annotation: predicted capsid packaging protein # Family: family:all:196 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490599;genbank:gi:17313219;genbank:GeneID:927315 Probab=100.00 E-value=4e-51 Score=296.87 Aligned_cols=323 Identities=14% Similarity=0.112 Sum_probs=226.4 Q ss_pred Ccchhhhccccccccccccchh------HHHhhhcCccccccccccHHHHhccHHHHHHHHH---------HHHhhccCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNN------ILLNMFGGRKTASGERVSESNSLVQPDIFACVNV---------LSDDIAKLP 65 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~---------ia~~ia~~~ 65 (416) |-=.|-.+++...+.+.....+ ....+|+.+. ....++....+....++.|-+. ||+.+..-+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~v~~~~~~~~y~~~~~~~~~~~pp~~~~~la~~~~~~~ 78 (350) T protein:vir:11 1 MSKRRSHRRQQPVTVQSAQEGEFIPRQGGRAEAFTFGD--PMPVLDGRGILDYLECWPNGRWYEPPLSMEGLAKSVGSSV 78 (350) T ss_pred CCccccCCCcCccccCCcchhhhccccccceEEEEeCC--ceeecCcchhhHHHHHhhcCccccCCCCHHHHHHHHhhhh Confidence 4322211111111111000000 0111222110 0011111111111122222111 111111111 Q ss_pred ceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC Q lcl|Aclame:pro 66 IHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT 145 (416) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~ 145 (416) .+ +..-...+... ....+||++||+.+|++ ++.+++++||||++++|+..|++++|+|++|.+|++..+.+ T Consensus 79 ~h-------~~~l~~k~n~l-~~~~~Pn~~~t~~~f~~-~v~d~ll~Gnay~~~~rn~~G~~~~L~~l~~~~vr~~~~~~ 149 (350) T protein:vir:11 79 YL-------QSGLKFKRNML-AKTFIPHRLLSRATFEQ-FSLDWLTFGSAYLEQPRSRLGTRMPLQAPLAKYMRRGTDLE 149 (350) T ss_pred hh-------ccchhhhhhhh-hhcccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCCEEEEEEeCCceeEeeecCC Confidence 10 00000001111 11358999999999986 56799999999999999999999999999999998876543 Q ss_pred CcEEEEEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcCCH Q lcl|Aclame:pro 146 TGMLWYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFLDE 223 (416) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~~~ 223 (416) .+|++..++..+.|++++|||++.+++ ++++|+|++..+..++....++..++.++|+||++|+++++.+ ..+++ T Consensus 150 ---~~~~~~~~~~~~~~~~~eVihir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~~~gil~~~~~~ls~ 226 (350) T protein:vir:11 150 ---TFYQVRSWKDEHEFEKGSVIQLREADINQEIYGVPEWFCALQSALLNESATLFRRKYYNNGSHAGFILYMTDAAQNE 226 (350) T ss_pred ---eEEEEeeCCeEEEECcccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCH Confidence 345666777888999999999998764 5789999999999999999999999999999999999999986 57999 Q ss_pred HHHHHHHHHHHHhh---cCCceeec-----CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC--CCc Q lcl|Aclame:pro 224 KPKENVRKEWKRVN---KVENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK--ATF 293 (416) Q Consensus 224 e~~~~~~~~~~~~~---~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~--~~~ 293 (416) ++.+++++.|++.. |+++++|+ ++|++++|++.+++|+||.|.+++++++||++|||||.++|+.++ +++ T Consensus 227 e~~~~l~~~~~~~~G~~N~~~~~v~~~~g~~~g~~~~pl~~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~~t~~~ 306 (350) T protein:vir:11 227 EDIDALRTALKTAKGPGNFRNLFVYAPNGKKEGIQLIPVSEVAAKDEFGSIKNISRDDQLAGLRVYPQLMGVVPQNAGGF 306 (350) T ss_pred HHHHHHHHHHHHhcCccccCceeeecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCc Confidence 99999999998754 45677777 468999999999999999999999999999999999999998766 568 Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhh Q lcl|Aclame:pro 294 SNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSE 342 (416) Q Consensus 294 s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l 342 (416) +|.|++.+.|++++|.|+++.|++ +|.+|..+. ..+.+|++++| T Consensus 307 sn~e~~~~~f~~~~L~P~~~~ie~-ln~~l~~~~----~~F~~~~~~~l 350 (350) T protein:vir:11 307 GSISDAAAVWASLELAPMQTRLQQ-VNEMIGEEV----VRFAQFDAPGL 350 (350) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH-HHhhcCccc----cccCcccccCC Confidence 999999999999999999999985 787765432 23456777777 No 99 >protein:vir:5691 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839850;genbank:gi:30065705;genbank:GeneID:1260599 Probab=100.00 E-value=4.6e-50 Score=291.07 Aligned_cols=317 Identities=16% Similarity=0.177 Sum_probs=224.3 Q ss_pred Ccchhhhcccccccccccc---chhHHHhhhcCc-cc--ccccc-ccHHHHhcc------HHHHHHHHHHHHhhc--cCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDG---FNNILLNMFGGR-KT--ASGER-VSESNSLVQ------PDIFACVNVLSDDIA--KLP 65 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~---~~~~~~~~~~~~-~~--~~~~~-~~~~~a~~~------~~v~~~i~~ia~~ia--~~~ 65 (416) |- +++.....+... ....-..+|+.+ +. .++.. .+.-.+..+ |.=+.++..+.+.-+ +-+ T Consensus 1 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~a~~~h~s~ 75 (344) T protein:vir:56 1 MS-----KKKGKTPQPAAKTMTASAPKMEAFTFGEPVPVLDRRDILDYVECISNGRWYEPPVSFTGLAKSLRAAVHHSSP 75 (344) T ss_pred CC-----CCCCCCCchhhHHhhcCCCceEEEEcCCceeecCcchhhhHHHhhhcCccccCCCCHHHHHHHHhhhhhhCcc Confidence 32 222211111000 000001112111 00 00000 000000111 111222222211111 122 Q ss_pred ceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC Q lcl|Aclame:pro 66 IHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT 145 (416) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~ 145 (416) +...+ +-+. -.-+||++||+.+| +.++.+++++||||++++|+..|++++|+|+++.+|++..+.+ T Consensus 76 i~~k~-----------n~l~--~~~~Pnp~~t~~~f-~~~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~v~~~~~~~ 141 (344) T protein:vir:56 76 IYVKR-----------NILA--STFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEED 141 (344) T ss_pred ceehh-----------hhHH--hhcCCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceeEEeecCC Confidence 22211 1111 13589999999999 6778899999999999999999999999999999999876543 Q ss_pred CcEEEEEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcCCH Q lcl|Aclame:pro 146 TGMLWYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFLDE 223 (416) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~~~ 223 (416) .+|++...+..+.+++++|||++.+++ ++++|+|++..+..++....++..+.+++|+||++|++|++.+ ..+++ T Consensus 142 ---~~~~~~~~g~~~~~~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il~~~d~~ls~ 218 (344) T protein:vir:56 142 ---VYWWVPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDR 218 (344) T ss_pred ---EEEEEecCCeEEEEcCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCH Confidence 345566777888999999999998764 7899999999999999999999999999999999999999875 47999 Q ss_pred HHHHHHHHHHHHhh--cCCceeec------CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC--CCc Q lcl|Aclame:pro 224 KPKENVRKEWKRVN--KVENIAII------DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK--ATF 293 (416) Q Consensus 224 e~~~~~~~~~~~~~--~~~~~~vl------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~--~~~ 293 (416) ++++++++.|++.. +++++++| .+|++++|++.+++|+||+|++++++++||++|||||.++|..++ +++ T Consensus 219 e~~~~lk~~~~~~~g~~~~r~l~l~~p~g~~~G~~~~pis~~~~d~qf~e~k~~s~~eIa~afrVPp~llGi~~~~t~~~ 298 (344) T protein:vir:56 219 NDIEMLRENMVKSKGRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGSL 298 (344) T ss_pred HHHHHHHHHHHHhcCCCCccceEEecCCCCccceeEEEcCCChHHHHHHHHHHhhHHHHHHHhCCCHHHhccCCCCCCcc Confidence 99999999998764 45567777 479999999999999999999999999999999999999998765 468 Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccH Q lcl|Aclame:pro 294 SNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDS 347 (416) Q Consensus 294 s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~ 347 (416) +|.|++.+.|+++||.|+++.||+ +|.+|..+. ++|+.-.|...|- T Consensus 299 ~n~eq~~~~f~~~tL~Pl~~~ie~-~n~~l~~~~-------~~F~~y~l~~~~~ 344 (344) T protein:vir:56 299 GDIEKVAKVFVRNELIPLQDRIRE-INGWIGQEV-------IRFKNYSLDTDNG 344 (344) T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH-HHhhhcccc-------ccCCCccccccCC Confidence 999999999999999999999985 777776432 4454444433333 No 100 >protein:vir:6058 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878199;genbank:gi:33438898;genbank:GeneID:1457733 Probab=100.00 E-value=4.3e-50 Score=291.20 Aligned_cols=317 Identities=16% Similarity=0.167 Sum_probs=225.5 Q ss_pred Ccchhhhcccccccccc---ccchhHHHhhhcCccc---cccc-cccHHHHhcc------HHHHHHHHHHH--HhhccCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHE---DGFNNILLNMFGGRKT---ASGE-RVSESNSLVQ------PDIFACVNVLS--DDIAKLP 65 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~-~~~~~~a~~~------~~v~~~i~~ia--~~ia~~~ 65 (416) |. +++.....+. ......-..+|+.+.. ..+. ..+.-.+..+ |.-+.++..+. +...+-+ T Consensus 1 m~-----~~~~~~~~~~~~~~~~~~~~~~~~~f~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~a~~~h~~~ 75 (344) T protein:vir:60 1 MS-----KKKGKTLQPAAKKMTASAPKMEAFTFGEPVPVLDRRDILDYVECISNGRWYEPPISFTGLAKSLRAAVHHSSP 75 (344) T ss_pred CC-----cccCCCCCchHHhhcCCcCcEEEEEcCCceeecCCcchhHHHHhhhcCccccCCCCHHHHHHHHHhhhhhccc Confidence 43 3322111100 0000001111111100 0000 0000001111 11111111111 1111112 Q ss_pred ceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC Q lcl|Aclame:pro 66 IHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT 145 (416) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~ 145 (416) +...+ +-+. -..+||++||+.+| +.++.+++++||||++++|+..|++++|+|++|.+|++..+.+ T Consensus 76 i~~k~-----------n~l~--~~~~Pn~~~t~~~f-~~~~~d~ll~Gnay~~i~rn~~G~~~~L~~l~~~~vr~~~~~~ 141 (344) T protein:vir:60 76 IYVKR-----------NILA--STFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEED 141 (344) T ss_pred hhhhh-----------hHHH--hhccCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEcCcceEEEeecCC Confidence 22111 1111 13589999999999 5788999999999999999999999999999999999876644 Q ss_pred CcEEEEEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcCCH Q lcl|Aclame:pro 146 TGMLWYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFLDE 223 (416) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~~~ 223 (416) .+|++..++..+.+++++|||++.+++ ++++|+||+..+..++.+..++..++.++|+||++|+++++.+ ..+++ T Consensus 142 ---~~~~v~~~~~~~~~~~~eIiHir~~~~~~~~yGlsp~~~a~~si~l~~~a~~~~~~~f~NG~~pg~il~~~~~~ls~ 218 (344) T protein:vir:60 142 ---VYWWVPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDR 218 (344) T ss_pred ---eEEEEccCCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCH Confidence 345666777888999999999998764 7899999999999999999999999999999999999999875 57999 Q ss_pred HHHHHHHHHHHHhh--cCCceeec------CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCC--Cc Q lcl|Aclame:pro 224 KPKENVRKEWKRVN--KVENIAII------DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKA--TF 293 (416) Q Consensus 224 e~~~~~~~~~~~~~--~~~~~~vl------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~--~~ 293 (416) ++.+++++.|++.. ++++.+++ .+|+++++++.+++|+||+|.+++++++||++|||||.++|..+++ ++ T Consensus 219 e~~~~ik~~~~~~~g~~~~r~~~l~~p~g~~~g~~~~pis~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi~~~~t~~~ 298 (344) T protein:vir:60 219 NDIEMLRENMVKSKGRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGSL 298 (344) T ss_pred HHHHHHHHHHHHhcCCCCCcceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcccCCCCCcc Confidence 99999999998765 33456666 4789999999999999999999999999999999999999987654 58 Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccH Q lcl|Aclame:pro 294 SNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDS 347 (416) Q Consensus 294 s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~ 347 (416) +|.|++.+.|++++|.|+++.|| +||.+|.. ..++|+.-++...|- T Consensus 299 ~n~e~~~~~f~~~~L~Pl~~~~e-~ln~~lg~-------~~i~F~~~~l~~~d~ 344 (344) T protein:vir:60 299 GDIEKVAKVFVRNELIPLQDRIR-EINGWLGQ-------EVIRFKNYSLDTDNG 344 (344) T ss_pred ccHHHHHHHHHHHHHHHHHHHHH-HHHHhcCC-------cccccCccccCCCCC Confidence 99999999999999999999998 58887642 235666666655554 No 101 >protein:vir:3780 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536820;genbank:gi:17981829;genbank:GeneID:929208 Probab=100.00 E-value=7.9e-50 Score=289.79 Aligned_cols=322 Identities=12% Similarity=0.057 Sum_probs=228.3 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccccccccc---------HHHHhccHHHHHHHHHHHHhhccCcceEEee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVS---------ESNSLVQPDIFACVNVLSDDIAKLPIHTYKR 71 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 71 (416) |-=. +++......... ..-...|+.+. ...+.+. ...++.-|.-+..+..+ +-.-+.+ . T Consensus 1 ~~~~---~~~~~~~~~~~~--~~~~~~f~~~~-~~~~~~~~y~~~~~~~~~~~~epp~~~~~la~l---~~~~~~h-~-- 68 (345) T protein:vir:37 1 MKTN---VKTDNKKGIVIA--PINDRTFSLNE-ISASPALDYVGIGFDENYNCYLPPVNRHALAKL---PHQNAQH-G-- 68 (345) T ss_pred CCCC---ccccchhhcccC--cceeEEeecCC-cccccchhhhhhhhcCCccccCCCCCHHHHHHH---hhccccc-c-- Confidence 3211 111111100000 00011121110 0000000 00111111112222222 1111111 0 Q ss_pred cCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEE Q lcl|Aclame:pro 72 TDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWY 151 (416) Q Consensus 72 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~ 151 (416) ..-..++.... ...+||++||+.+|++ ++.+++++||||++++|+..|++++|+|++|..|++..+.+....++ T Consensus 69 ----~~i~~k~n~l~-~~~~Pn~~lt~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~d~~~~~~~~ 142 (345) T protein:vir:37 69 ----GILHSRANMVS-SLYEGGKALSRMDMRA-LCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVRKDGGYSYLMK 142 (345) T ss_pred ----cceeeechHHH-hhccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCcEEEEEEEcCceeEEEEeCCeeEEEE Confidence 00001112222 2358999999999985 55789999999999999999999999999999999887765543332 Q ss_pred --EEeeCCeeEEechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcCCHHHHH Q lcl|Aclame:pro 152 --QTVLNGKAIELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFLDEKPKE 227 (416) Q Consensus 152 --~~~~~~~~~~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~~~e~~~ 227 (416) .+...+..+.+++++|||+|.++ .++++|+|++..+..++....++..++.++|+||++|++|+..+ ..+++++.+ T Consensus 143 ~~~~~~~g~~~~~~~~dVihir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NG~~p~~Il~~~d~~l~~e~~~ 222 (345) T protein:vir:37 143 KSLYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTDPDLTEEMEE 222 (345) T ss_pred EeEecCCceEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEecCCCCCHHHHH Confidence 23345667889999999999876 46889999999999999999999999999999999999999875 679999999 Q ss_pred HHHHHHHHhh---cCCceeec-----CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC--CCcccHH Q lcl|Aclame:pro 228 NVRKEWKRVN---KVENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK--ATFSNIE 297 (416) Q Consensus 228 ~~~~~~~~~~---~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~--~~~s~~e 297 (416) ++++.|++.. |.++++|+ ++|++++|++.+++|+||.|.+++++++||++|||||.++|..++ ++++++| T Consensus 223 ~lk~~~~~~~g~~n~~~~~i~~p~g~~~G~~~~pls~~~~d~qf~e~k~~~~~dIa~a~~VPp~llGi~~~~~~~~~~~e 302 (345) T protein:vir:37 223 EIARKISESKGVGNFRSMFVNIANGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGGLGDPL 302 (345) T ss_pred HHHHHHHHhcCcccccceEEEcCCCcccceEEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCccCCCCCCcccHH Confidence 9999998753 44566776 579999999999999999999999999999999999999998655 5689999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhh Q lcl|Aclame:pro 298 HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELR 344 (416) Q Consensus 298 ~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~ 344 (416) ++.+.|++++|.|+++.|++++|+.+ +...+..++|+..+|.. T Consensus 303 ~~~~~f~~~~l~P~~~~ie~~ln~~~----~~~~~~~i~F~~~~L~~ 345 (345) T protein:vir:37 303 KYREVYHYDEVMPLQEIIAETINQDP----EIKNLLKIKFREQNFAK 345 (345) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhc----cCCCcceEEecchhhcC Confidence 99999999999999999999999743 23345678898888766 No 102 >protein:vir:4698 Length: 251 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:102 # MgeName: phiPV83 # Cross-refs: genbank:acc:NP_061630;genbank:gi:9635717;genbank:GeneID:1262980 Probab=100.00 E-value=2e-50 Score=293.00 Aligned_cols=242 Identities=18% Similarity=0.305 Sum_probs=200.7 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.|.+.+++|+..... ... ..+.+.+....+..+..++.+.|+++++|++||++||+++|++|+++++.++ ... T Consensus 1 MglF~~~~~r~~~~~~-~~~-~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~iA~lp~~~~~~~~----~~~ 74 (251) T protein:vir:46 1 MGIFYKNEKRDLQYNE-DDL-QMMVQTLPSFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQ----INY 74 (251) T ss_pred CCccccccccccCCCc-cch-hhhhhhhccccCcCcceechhhhhccHHHHHHHHHHHHhHhhCceEEeeCcc----ccc Confidence 8886656555433322 222 2234444455555677789999999999999999999999999999997543 345 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEee----C Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVL----N 156 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~----~ 156 (416) +||++.+|+.+||++||+++||+.++.+++++||||+++.|+..|++.+|+|++|++|++..+.++...++.+.. . T Consensus 75 ~~~~~~ll~~~Pn~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~~~ 154 (251) T protein:vir:46 75 SDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGN 154 (251) T ss_pred cchHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCceEEEEECCCCcEEEEEEEeccCCc Confidence 799999999999999999999999999999999999999999999999999999999999998887776654432 2 Q ss_pred CeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-CHHHHHHHHHHHHH Q lcl|Aclame:pro 157 GKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-DEKPKENVRKEWKR 235 (416) Q Consensus 157 ~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~~~ 235 (416) +..+.+++++|||+|+++.++++|+||+..++.++....++++++.++|+||++|+++++.++.+ ++++.+++++.|++ T Consensus 155 g~~~~~~~~diiH~r~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~~e~~~~~~~~~~~ 234 (251) T protein:vir:46 155 NIERNVKFEDMLDIKFYSLDGINGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFPK 234 (251) T ss_pred ceeEEECCccEEEecCcCCCCeeecCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcEEEEeCCCCCCHHHHHHHHHHHHH Confidence 44578999999999999999999999999999999999999999999999999999999999887 56677899999987 Q ss_pred hhc----CCceeecCCCcee Q lcl|Aclame:pro 236 VNK----VENIAIIDYGLEY 251 (416) Q Consensus 236 ~~~----~~~~~vl~~g~~~ 251 (416) .+. +|++++ |++= T Consensus 235 ~~~g~~n~g~~~~---gm~~ 251 (251) T protein:vir:46 235 VLVELNKLGKLSY---SMNQ 251 (251) T ss_pred HhcCccccccccc---ccCC Confidence 753 455554 3322 No 103 >protein:vir:3743 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043484;genbank:gi:9628619;genbank:GeneID:1261113 Probab=100.00 E-value=1.8e-49 Score=287.78 Aligned_cols=321 Identities=12% Similarity=0.062 Sum_probs=225.7 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCc-ccc----ccccc---cHHHHhccHHHHHHHHHH--HHhhccCcceEEe Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGR-KTA----SGERV---SESNSLVQPDIFACVNVL--SDDIAKLPIHTYK 70 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~---~~~~a~~~~~v~~~i~~i--a~~ia~~~~~~~~ 70 (416) |- +..++........... -...|+.. +.. ....+ ....++.-|.-+..+..+ ++..-+-.+.+.+ T Consensus 1 ~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~epp~~~~~la~~~~~~~~h~~~i~~k~ 75 (345) T protein:vir:37 1 MK--TNVKTDNKKGIVIAPI---NDRTFSLSEITASPALDYVGIGFDENYNCYLPPVNRHALAKLPHQNAQHGGILHSRA 75 (345) T ss_pred CC--ccccccchhhhcCCCc---eEEEeecCCcccchhhcccceeeecCCccccCCCCHHHHHHHhhcchhhcchhhhhh Confidence 21 2111111000111000 00011100 000 00000 000111111111111111 1111111111110 Q ss_pred ecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEE Q lcl|Aclame:pro 71 RTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLW 150 (416) Q Consensus 71 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~ 150 (416) + ......+||++||+.+|++ ++.+++++||||++++|+..|++++|+|++|.+|++..+.+....+ T Consensus 76 -----------n--~l~~~~~Pn~~~t~~~f~~-~v~d~ll~Gnay~~i~rn~~G~~~~L~pl~~~~vr~~~d~~~~~~~ 141 (345) T protein:vir:37 76 -----------N--MVSATYEGGKALSKMEMRA-LCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVHKDGGYSYLM 141 (345) T ss_pred -----------h--HHhhccCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEecCceeEEeecCCeeEEE Confidence 0 1122348999999999975 5578999999999999999999999999999999987665433222 Q ss_pred --EEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcCCHHHH Q lcl|Aclame:pro 151 --YQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFLDEKPK 226 (416) Q Consensus 151 --~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~~~e~~ 226 (416) +.+...+....+++++|||++.+++ ++++|+|++..+..++....++..+++++|+||++|++|+..+ ..+++++. T Consensus 142 ~~~~~~~~g~~~~~~~~eViHir~~~~~~~~~Gl~~~~~a~~si~l~~~a~~~~~~~f~NGa~~~~Il~~t~~~l~~e~~ 221 (345) T protein:vir:37 142 KKSLYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTDPDLTEEME 221 (345) T ss_pred eeeeeccCceEEEEccccEEEEcCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHH Confidence 2233456778899999999998765 6899999999999999999999999999999999999999865 57999999 Q ss_pred HHHHHHHHHhhcC---Cceeec-----CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC--CCcccH Q lcl|Aclame:pro 227 ENVRKEWKRVNKV---ENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK--ATFSNI 296 (416) Q Consensus 227 ~~~~~~~~~~~~~---~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~--~~~s~~ 296 (416) +++++.|++.... ++++++ ++|++++|++.+++|+||.+.+++++++||++|||||.++|+.++ +++++. T Consensus 222 ~~lk~~~~~~~g~~n~~~~~i~~~~g~~~G~~~~pl~~~~~d~qf~e~k~~~~~dI~~a~~VPp~liGi~~~~t~~~s~~ 301 (345) T protein:vir:37 222 EEIARKISESKGVGNFRSMFVNIAGGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGGLGDP 301 (345) T ss_pred HHHHHHHHHhcCccccCceeEecCCCCccceeEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhccccCCCCCcccH Confidence 9999999987633 334444 467999999999999999999999999999999999999998765 568999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhh Q lcl|Aclame:pro 297 EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELR 344 (416) Q Consensus 297 e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~ 344 (416) |++.+.|+++||.|+++.|++++|+.+ +...+..++|+..+|++ T Consensus 302 e~~~~~f~~~~l~P~~~~ie~~ln~~~----e~~~~~~i~F~~~~l~k 345 (345) T protein:vir:37 302 LKYREVYHYDEVMPLQEIIAETINQDP----EIKNLLKIKFREQNFAK 345 (345) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhh----ccCCcceEEECchhhcC Confidence 999999999999999999999999742 23456789999999988 No 104 >protein:vir:2013 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046757;genbank:gi:9630328;genbank:GeneID:1261529 Probab=100.00 E-value=3.3e-50 Score=291.89 Aligned_cols=317 Identities=16% Similarity=0.190 Sum_probs=226.5 Q ss_pred Ccchhhhcccccccccccc---chhHHHhhhcCcc-c--cccccc-cHHHHhc-----cHHH-HHHHHHH--HHhhccCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDG---FNNILLNMFGGRK-T--ASGERV-SESNSLV-----QPDI-FACVNVL--SDDIAKLP 65 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~---~~~~~~~~~~~~~-~--~~~~~~-~~~~a~~-----~~~v-~~~i~~i--a~~ia~~~ 65 (416) |- |+|.....+... ....-..+|+.+. . .++..+ +.-.+.. .|.| +.++..+ |+...+.+ T Consensus 1 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~f~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~a~~~h~~~ 75 (344) T protein:vir:20 1 MS-----KKKGKTPQPAAKTMTASGPKMEAFTFGEPVPVLDRRDILDYVECISNGRWYEPPVSFTGLAKSLRAAVHHSSP 75 (344) T ss_pred CC-----cccCCCCcchhhhhhccCCceEEEEcCCceEecCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhhhhCcc Confidence 32 222211111000 0000011111110 0 000000 0000000 1111 1121111 11111222 Q ss_pred ceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC Q lcl|Aclame:pro 66 IHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT 145 (416) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~ 145 (416) +..++ +-+. -..+||++||+.+| +.++.+++++||||++++|+..|++++|+|+++.+|++..+.+ T Consensus 76 i~~k~-----------n~l~--~~~~Pn~~lt~~~f-~~~~~d~ll~Gnay~~i~rn~~G~~~~L~pl~~~~vr~~~~~~ 141 (344) T protein:vir:20 76 IYVKR-----------NILA--STFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEED 141 (344) T ss_pred ceehh-----------hhHH--HhccCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEcCCceeEeeecCC Confidence 22211 1111 13489999999999 5778999999999999999999999999999999999876543 Q ss_pred CcEEEEEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcCCH Q lcl|Aclame:pro 146 TGMLWYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFLDE 223 (416) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~~~ 223 (416) .++++..++..+.+++++|||++.+++ ++++|+|++..+.+++.+..++..++.++|+||++|++++..+ ..+++ T Consensus 142 ---~~~~~~~~~~~~~~~~~eIiHir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~p~~Il~~~d~~l~~ 218 (344) T protein:vir:20 142 ---VYWWVPSFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDR 218 (344) T ss_pred ---EEEEEccCCeEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCH Confidence 345566677888999999999998765 6899999999999999999999999999999999999999875 57999 Q ss_pred HHHHHHHHHHHHhh--cCCceeec------CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC--CCc Q lcl|Aclame:pro 224 KPKENVRKEWKRVN--KVENIAII------DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK--ATF 293 (416) Q Consensus 224 e~~~~~~~~~~~~~--~~~~~~vl------~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~--~~~ 293 (416) ++.+++++.|++.. ++++.++| .+|++++|++.+++|+||.|.+++++++||++|||||.++|+.++ +++ T Consensus 219 e~~~~ik~~~~~~~g~~n~r~l~l~~p~g~~~gi~~~pis~~~~d~qf~e~k~~s~~eIa~af~VPp~llGi~~~~t~~~ 298 (344) T protein:vir:20 219 NDIEMLRENMVKSKGRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGSL 298 (344) T ss_pred HHHHHHHHHHHHhcCCCCccceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhccCCCCCCcc Confidence 99999999998765 34456665 468999999999999999999999999999999999999998765 458 Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccH Q lcl|Aclame:pro 294 SNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDS 347 (416) Q Consensus 294 s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~ 347 (416) +|.|++.+.|++++|.|+++.|+ ++|.+|.. ..++|+...|...|. T Consensus 299 ~n~e~~~~~f~~~~l~P~~~~~e-~in~~lg~-------~~i~F~~~~l~~~d~ 344 (344) T protein:vir:20 299 GDIEKVAKVFVRNELIPLQDRIR-EINGWLGQ-------EVIRFKNYSLDTDND 344 (344) T ss_pred ccHHHHHHHHHHHHHHHHHHHHH-HHHHhcCC-------cccccCccccccCCC Confidence 99999999999999999999998 57776643 236787777766666 No 105 >protein:vir:98853 Length: 219 # NCBI annotation: hypothetical protein # Family: family:all:196 # MgeID: mge:1495 # MgeName: F108 # Cross-refs: genbank:acc:YP_654729;genbank:gi:109302914;genbank:GeneID:4156058 Probab=100.00 E-value=1.4e-41 Score=244.60 Aligned_cols=203 Identities=12% Similarity=0.100 Sum_probs=165.9 Q ss_pred EEEEEcCCCcEEEEE----EeeCCeeEEechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Q lcl|Aclame:pro 138 TNAYVHPTTGMLWYQ----TVLNGKAIELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPR 212 (416) Q Consensus 138 v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~ 212 (416) |+ ...+|...|.. +...+..+++++++|+|+|.++ .++++|+||+..++.++....++.+++.++|+||++|+ T Consensus 1 ~r--~~~dg~~~y~~~~~~~~~~g~~~~~~~~eilH~r~~~~~~~~~Glspi~~a~~~i~~~~aa~~~~~~~f~Ng~~p~ 78 (219) T protein:vir:98 1 MR--VCKDGNYKYLMKKSLYDTKSEIYEYNKNDVIFIKLYDPMQQVYGSPDYVGGITSALLNSDATIFRRRYYSNGAHMG 78 (219) T ss_pred Cc--eeecCeEEEEEecceecCCceeEEeccccEEEecCCCCCCCcceecHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc Confidence 22 22333333221 1223567889999999999876 57899999999999999999999999999999999999 Q ss_pred eeeccCC-cCCHHHHHHHHHHHHHhh---cCCceeec-----CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchh Q lcl|Aclame:pro 213 GILKVPA-FLDEKPKENVRKEWKRVN---KVENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLH 283 (416) Q Consensus 213 ~v~~~~~-~~~~e~~~~~~~~~~~~~---~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~ 283 (416) +|++.++ .+++++.+++++.|++.. ++++++|+ ++|++|++++++++|+||+|++++++.+||++|||||. T Consensus 79 gil~~~~~~l~~e~~~~~~~~~~~~~g~~n~~~~~l~~~gg~~~G~~~~~~~~~~~d~qfle~rk~~~~eIa~~fgVPp~ 158 (219) T protein:vir:98 79 FILYSTDPDMTEEMEDEIAERIRDSKGVGNFRSMFVNIAGGHPDGLKVIPIGDTGQKDEFANIKNISAQDVLTSHRFPPG 158 (219) T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHhcCcccccceeEecCCCCccceeEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHH Confidence 9998754 799999999999998754 33445555 56899999999999999999999999999999999999 Q ss_pred hccccc--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhcc Q lcl|Aclame:pro 284 KLNELD--KATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGD 346 (416) Q Consensus 284 ~lg~~~--~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d 346 (416) +||..+ +++++|+|++...|+++||.|+++.||++||.+++.+.+ .+++|+.+.+...+ T Consensus 159 ~lG~~~~~~~~~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~~~~~~~----~~~~F~~~~~~d~~ 219 (219) T protein:vir:98 159 LSGIIPVNTAGLGDPLKIREAYQADEVLPLQEIIAESINSDYEIKSA----LKVNFKQPEKRDKN 219 (219) T ss_pred HcccccCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCc----cEEeecCcccccCC Confidence 999764 457999999999999999999999999999998665433 35677655543333 No 106 >protein:vir:5249 Length: 437 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852754;genbank:gi:31544029;interpro:IPR006445;uniprot:Q7Y5U6;genbank:GeneID:2753529 Probab=99.94 E-value=8.2e-27 Score=163.59 Aligned_cols=378 Identities=12% Similarity=0.037 Sum_probs=238.4 Q ss_pred ccchhHHHhhhcCcc--------------ccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccc Q lcl|Aclame:pro 18 DGFNNILLNMFGGRK--------------TASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHK 83 (416) Q Consensus 18 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~ 83 (416) +...+.+.++..+.- +..+..+ ...|.+++.++++|+.+|.++-+.++.+...+.+. . T Consensus 1 ~~~~D~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l-~a~Y~~~~l~~~~vd~~a~d~~r~~~~i~~~d~~~-------~ 72 (437) T protein:vir:52 1 MKFFDGIKSLALKLGSKQEQTYYSPSLSLTDDLVQL-EALWRDNWIANKVCIKRPEDMVRNWREIYSNDLNS-------K 72 (437) T ss_pred CchhhhhHhHHhcCCCccccceeecCccccccHHHH-HHHHHhCchhhHHhhcchHHhhcCCceEecCCCCH-------H Confidence 222222222221100 0111111 23455788999999999999999999986422111 1 Q ss_pred hhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC---------CCcEEEEEeeccceEEEEEcC--------CC Q lcl|Aclame:pro 84 SAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS---------HGYPEALFPLRPDYTNAYVHP--------TT 146 (416) Q Consensus 84 ~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~---------~g~~~~l~~l~p~~v~~~~~~--------~~ 146 (416) ....+...-.. ....+-+...+...-++|.+++++.++. .|.+..+.++++..+++.... .| T Consensus 73 ~~~~~~~~~~~-l~~~~~l~~a~~~~rl~G~a~i~i~~d~~~~~~pl~~~~~~~~~~v~~~~~v~~~~~~~~dp~s~~fg 151 (437) T protein:vir:52 73 QLDLFTKFERS-LKLRETLTKALQWSSLYGSVGLLVVTDSQNTSAPLKPTERLKRLIILPKWKISPTGTKDDDVLSPNFG 151 (437) T ss_pred HHHHHHHHHHh-hcHHHHHHHHHHhcccccceEEEEEecCCCcccccccCCceeEEEEechhhccccccccccccccccC Confidence 11112111111 1223444455555568999999998865 367889999999888753222 35 Q ss_pred cEEEEEEeeCCeeEEechhheeeeccC----CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC--- Q lcl|Aclame:pro 147 GMLWYQTVLNGKAIELYDYEVLHFKGL----STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA--- 219 (416) Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~vih~~~~----~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~--- 219 (416) .+.+|.+...+..+.+-++.|+||... +.+.+.|.|.++.+.+.+............++.+...+ ++++++ T Consensus 152 ~p~~y~v~~~~~~~~iH~SRii~~~~~~~~~~~~~~~G~s~le~~~~~i~~~~~~~~~~~~l~~~~~~~--v~k~~~l~~ 229 (437) T protein:vir:52 152 RYSEYSILGGSQSITVHHSRLIILNANDAPLSDNDIWGVSDLEKIIDVLKRFDSASVNVGDLIFESKID--IFKIAGLSD 229 (437) T ss_pred cceEEEEecCCcceeEccceeEEecCccCCCccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ceecchHHH Confidence 677788877777788999999999743 23567899999999999999999999999888776544 334432 Q ss_pred cC---CHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccH Q lcl|Aclame:pro 220 FL---DEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNI 296 (416) Q Consensus 220 ~~---~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~ 296 (416) .+ .++...+..+.+....+.+++++++.+.+|+.++.+..++. +.......+||.+++||..+|.+...+..++. T Consensus 230 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~e~~~~~~sgl~--~~l~~~~~~iaaa~~iP~t~L~G~s~~Glasg 307 (437) T protein:vir:52 230 KIAAGMENEVASVISAVQEIKSATNSLLLDAENEYDRKELTFTGLK--DLLTEFRNAVAGAADMPVTILFGQSVSGLASG 307 (437) T ss_pred HhcCCcHHHHHHHHHHHHHhcCCCceEEEcCCcceEEEecCcCCHH--HHHHHHHHHHHHHhcCchhhhcCcCccccccc Confidence 22 24444555555666677889999999999999988877554 67788889999999999999977666666777 Q ss_pred HHHHHHHHH-------HHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHH-------HHHHHHHHHhCCC Q lcl|Aclame:pro 297 EHQSIEYVR-------NTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKT-------QAEYLKTLHETGV 362 (416) Q Consensus 297 e~~~~~f~~-------~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~-------~~~~~~~~~~~g~ 362 (416) ++..++||. .-+.|+++.+-..|-...+.. ...+ +.|.+++|...+.++ .++++.+++++|+ T Consensus 308 e~D~~~yyd~i~~~Qe~~l~p~le~l~~~i~~~~~g~--~~~~--~~~~f~pL~~~s~kekae~~~~~a~a~~~~~~~g~ 383 (437) T protein:vir:52 308 DEDIQNYHEAIRRLQETRLRPIFEIIDPLICNELFGG--LPAD--WWFEFVPLTTVKQEQQINMLNTFATAANTLIQNGV 383 (437) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCc--ceEEeCCcCCcCHHHHHHHHHHHHHHHHHHHhcCC Confidence 777888887 456666666666555444432 1223 445555776666544 4456888899999 Q ss_pred cCHHHHHHHh----CCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 363 LNKDEIRELL----ERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 363 ~t~NE~R~~~----gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) ++++|+|++| .++.++..|.--.. +..+. .++.++........+++..+| T Consensus 384 i~~~e~r~~L~~~g~~~~i~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~ 437 (437) T protein:vir:52 384 LNEYQIANELRESGLFANISAEHIEELK-NADEF--AGNFEEPEKMEGAQVQNSEDQ 437 (437) T ss_pred CCHHHHHHHHHhcCCCCCCCcccccccc-CCCCC--CCccCCCCCCCCCCCCCCCCC Confidence 9999999987 34445443321111 11111 111122222222334444444 No 107 >protein:vir:107742 Length: 537 # NCBI annotation: gp28 # Family: family:all:297 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024875;genbank:gi:48697517;genbank:GeneID:2948359 Probab=99.88 E-value=6e-23 Score=142.41 Aligned_cols=400 Identities=11% Similarity=0.084 Sum_probs=226.9 Q ss_pred Ccchh----hhccccccc-cc-cccchhHHH--hhhcCccccc--------cccc---cHHHHhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MLLER----MFEKRSGSS-DH-EDGFNNILL--NMFGGRKTAS--------GERV---SESNSLVQPDIFACVNVLSDDI 61 (416) Q Consensus 1 m~~~~----~f~~~~~~~-~~-~~~~~~~~~--~~~~~~~~~~--------~~~~---~~~~a~~~~~v~~~i~~ia~~i 61 (416) |=+.. +..+..... .. .++..+... .+.++....+ .... ....|.+++.++.+|+.+|.++ T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~Y~~~~l~r~iVd~~A~d~ 127 (537) T protein:vir:10 48 MAIRDHAIAMMPKVDGSHPDMAMDGLDVEGGTFSAYANPNLSEGLVLWYAQQAFIGHQMCALIATHWLVNKACSQMPRDA 127 (537) T ss_pred CCCCCccCcccccccccccchhccccccchhhhhhhccccccchhhhhccccCCccHHHHHHHHhCchhhhhhhhhhHHh Confidence 11100 001111000 00 000000000 0000100000 0011 1134457889999999999999 Q ss_pred ccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec-C---------------CC Q lcl|Aclame:pro 62 AKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG-S---------------HG 125 (416) Q Consensus 62 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~-~---------------~g 125 (416) .+-++.+...+++.. +......|......+..+..|.+.+ ....++|.+++++.-. . .| T Consensus 128 ~r~~~~i~~~~~~~~----~~~~~~~l~~~~~~l~~~~~l~~a~-~~~rlyG~~~i~i~v~~~D~~~~~~Pl~~~~i~kg 202 (537) T protein:vir:10 128 MRKGYKIISDDGNEL----DPKDAKFIDRYDRAFNIKKHAIQFV-RKGRIFGIRIALFKVDSPDPYYYEKPFNIDGVMPG 202 (537) T ss_pred hcCCceeecCCcccc----cHHHHHHHHHHHHHhhHHHHHHHHH-HhcccccceEEEEeecCcCCccccccccccccccc Confidence 999998865433221 1122334444444443444444444 4445679888887531 1 22 Q ss_pred cEEEEEeeccceEEEEEc----------CCCcEEEEEEeeCCeeEEechhheeeeccCCC-------CccccccHHHHHH Q lcl|Aclame:pro 126 YPEALFPLRPDYTNAYVH----------PTTGMLWYQTVLNGKAIELYDYEVLHFKGLST-------DGIHGKSPIGVVR 188 (416) Q Consensus 126 ~~~~l~~l~p~~v~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-------~~~~G~s~~~~~~ 188 (416) ....|.+++|.++.+... ..|.+.+|.+. ...+-++.|+|+..... .++.|.|.+..+. T Consensus 203 ~~k~l~vidp~~~~~~~~~~~~~dp~sp~fg~P~~y~v~----g~~iH~SRli~f~g~~~p~~~~~~~~~~G~Svlq~~~ 278 (537) T protein:vir:10 203 AYKGIVQIDPYWCAPLLDAQASSNPVSMHFYEPTYWLIN----GKKYHRSHLAIYINDEVVDFLKPSYIYGGVPLPQQIM 278 (537) T ss_pred ceeEEEEechhhcccccchhhhccCCccccCCceeeeec----CeEecceeEEEecCCCCchhhhcccCcccccHHHHHH Confidence 346788888888775321 12344445442 34677899999875421 3467999999999 Q ss_pred HHHHHHHHHHHHHHHHHhccCCcceeeccCCc-CCHHHHHHHHHHHHHhhcCCceeecCC-CceeEeccCChhhHHHHHH Q lcl|Aclame:pro 189 EHIGAQAAATKYNAKLYKNEATPRGILKVPAF-LDEKPKENVRKEWKRVNKVENIAIIDY-GLEYQSISMPLQEAQFVES 266 (416) Q Consensus 189 ~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~vl~~-g~~~~~~~~~~~d~~~~e~ 266 (416) +.+............++......-.-+..... .++++..+..+.+....+..++++++. +.+|+.++.+...+ .+. T Consensus 279 ~~l~~~~~t~~~~~~l~~~~~~~v~k~~~~~~l~~~~~~~~r~~~~~~~r~n~g~~~id~e~e~~e~~~~~lsgl--~~~ 356 (537) T protein:vir:10 279 ERVYAAERTANEGPMLAMTKRQTVLKVDAAQVLANKQQFDETMSWWTATRDNYQVRVVDKDNEDVVQIDTTLNDL--DKV 356 (537) T ss_pred HHHHHHHHHHHHHHHHHHhcCCceeeechHHhhcCHHHHHHHHHHHHhhcCCcceeEecCCCceeEEEeccCCCH--HHH Confidence 99999999888888888887665433332222 345544444455665566667788876 58999888777765 467 Q ss_pred HHHHHHHHHHHhccchhhcccc-cCCCcccHHHHHHHHHHH------HHHHHHHHHHHHHHHhhcCchhcccccchhhhh Q lcl|Aclame:pro 267 MKFNKAQISMIYKVPLHKLNEL-DKATFSNIEHQSIEYVRN------TLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNI 339 (416) Q Consensus 267 ~~~~~~~Ia~~~gvp~~~lg~~-~~~~~s~~e~~~~~f~~~------~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~ 339 (416) .......||.+.|||..+|-+. ..|..++.+...+.|+.. .|.|.+..+.+.+-+..+.. . ..+.|.+ T Consensus 357 l~~~~~~iAa~~~IP~t~L~G~sp~GlnatGe~D~~~yyd~I~~~Qe~l~p~l~~l~~ll~~~~~~~---~--~~~~i~f 431 (537) T protein:vir:10 357 IMNQYQLVCAIARTPAPKMLGTVPTGFNSTGDYEEASYHEECESTQDDMRPLIDRHHQLVCRSHLRK---R--IRVKVEF 431 (537) T ss_pred HHHHHHHHHhhhCCCceeeccCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---C--cceEEEe Confidence 7888889999999999976443 334445556666666644 37888888887777665543 1 2356667 Q ss_pred hhhhhccHHHHHH-------HHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccccccccccccc-------CCc Q lcl|Aclame:pro 340 DSELRGDSKTQAE-------YLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLK-------AGG 405 (416) Q Consensus 340 ~~l~~~d~~~~~~-------~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~-------~~~ 405 (416) ++|...|.+++++ ++++++++|++++||+|+.|+.+|..|-+.+....+....+......+.+ .++ T Consensus 432 ~pL~~~s~kEkAei~~~~a~a~~~~~~~G~i~~~Evr~~L~~~~~~g~~~l~~~~~~ed~e~~~~~~~~~~~~~~~~~~~ 511 (537) T protein:vir:10 432 PPMDAPKESERADTFLKKMQAAKLAFEMGAVDGVDVNEYLRMDPTLGFTSITPAMRPTDAEDIDVDDEGKPVRIIEDQPA 511 (537) T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhccCccccccccCCCChhhhhcccCCccCCcCCCCCCCCC Confidence 7888888877665 58889999999999999999988765544443221111111100000000 000 Q ss_pred cc----------CCCCccCCC Q lcl|Aclame:pro 406 AM----------KGGDNKNEG 416 (416) Q Consensus 406 ~~----------~gge~~~~~ 416 (416) .. ...+....| T Consensus 512 ~~~~~~~~~~~~~~~~~~~~~ 532 (537) T protein:vir:10 512 PSEMFGATSSGESANDPRDSG 532 (537) T ss_pred ccccCCCCccccccCCCccCc Confidence 00 001111111 No 108 >protein:vir:94049 Length: 532 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453629;genbank:gi:84662665;genbank:GeneID:5142559 Probab=99.88 E-value=1.1e-22 Score=140.88 Aligned_cols=400 Identities=13% Similarity=0.107 Sum_probs=226.4 Q ss_pred Ccchhhhcccccccc--ccccchhHHH---hhhcCcccc----cc-----ccc-cHHHHhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSD--HEDGFNNILL---NMFGGRKTA----SG-----ERV-SESNSLVQPDIFACVNVLSDDIAKLP 65 (416) Q Consensus 1 m~~~~~f~~~~~~~~--~~~~~~~~~~---~~~~~~~~~----~~-----~~~-~~~~a~~~~~v~~~i~~ia~~ia~~~ 65 (416) +-+-|-+........ ......+.+. ..-++.... .+ ... ....+.+++.++++|+.+|.++-+-. T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~l~a~Y~~~~l~r~~Vd~~aed~~r~~ 112 (532) T protein:vir:94 33 LGLATAHEIDPTAYSPYERNAAQNAMAMDYGLQTGRNGRNALSFVEATSWPGFPTLALLAQLPEYRTMHETPADECVRAW 112 (532) T ss_pred hhhhhhhhhcccccccccccccccccccccccCcccccccccccccccccchHHHHHHHHcCchhhhhhccchHHHhhCC Confidence 112222221110000 0011111110 000101000 00 000 12344578889999999999999999 Q ss_pred ceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC-------------------CCc Q lcl|Aclame:pro 66 IHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS-------------------HGY 126 (416) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~-------------------~g~ 126 (416) +++...+++.. +......|...-..+ ...+-+..++....++|.+++++.... .|. T Consensus 113 ~~i~~~~~~~~----~~~~~~~i~~~~~~l-~v~~~l~~a~~~~rlyG~a~i~i~v~~~~~~~~~~~p~~l~~~~I~~g~ 187 (532) T protein:vir:94 113 GKITCSSKDEL----AADKATRITQKLEQY-NVRTLVRTVVIHDQAYGGAHVFPHLKMDGDSVPADAPLLLSPSFVQRGC 187 (532) T ss_pred ceEeeCCcccc----chHHHHHHHHHHHhh-hHHHHHHHHHHhhhcccceEEEEEeccCCccccccccccccccccccce Confidence 99865433221 112222232222222 233444455555568999998875422 234 Q ss_pred EEEEEeeccceEEEEEcC--------CCcEEEEEEeeCCeeEEechhheeeeccCCC-------CccccccHHHHHHHHH Q lcl|Aclame:pro 127 PEALFPLRPDYTNAYVHP--------TTGMLWYQTVLNGKAIELYDYEVLHFKGLST-------DGIHGKSPIGVVREHI 191 (416) Q Consensus 127 ~~~l~~l~p~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-------~~~~G~s~~~~~~~~i 191 (416) ..+|.+++|.+|.+.... .|.+.+|.... ...+-++.|+|+..... .+++|.|.+..+.+.+ T Consensus 188 ~~~l~vld~~~v~p~~~~~~dp~sp~fg~P~~y~v~~---g~~iH~SRli~f~g~~~p~~~~~~~~~~G~Svlq~~~~~l 264 (532) T protein:vir:94 188 LIGFATIEPMWLSPNAYNATDPTLPSFYKPDSWIATS---GKKIHSSRIHTVVGRPVGDMLKAAYSFRGVSISQLAMPYV 264 (532) T ss_pred eeEEEeechheecccccccccccccccCCceeEEEcc---CeeeccceEEEecCCCchhhhccccccccccHHHHHHHHH Confidence 468899999888765332 23334444322 24677899999875432 2457999999999999 Q ss_pred HHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHh---hcCCceeecCC-CceeEeccCChhhHHHHHHH Q lcl|Aclame:pro 192 GAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRV---NKVENIAIIDY-GLEYQSISMPLQEAQFVESM 267 (416) Q Consensus 192 ~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~---~~~~~~~vl~~-g~~~~~~~~~~~d~~~~e~~ 267 (416) ............+..........+.....++.+..+++.++++.. .+..++++++. +.+|+.++.+..++ .+.. T Consensus 265 ~~~~~t~~~~~~l~~~~~~~v~k~~~a~~ls~~~~~~~~~r~~~~~~~~~n~g~~~id~~~e~~e~~~~~lsgl--~~~l 342 (532) T protein:vir:94 265 DNWLRTRQSVSDTVKQFSMTNLATDMAQLLAPGGAQSLDARLQLFNLYRDNRNIGALDKGTEEIQQTNTPLSGL--DSLQ 342 (532) T ss_pred HHHHHHHHHHHHHHHhcCCceeeechHHhhcchhHHHHHHHHHHHHhhcCCccceEEcCCCceeEEEecccCCH--HHHH Confidence 999988888888777655443322223445656667777766533 34556788875 57899888777754 4677 Q ss_pred HHHHHHHHHHhccchhhcccccC-CCcccHHHHHHHHHH-------HHHHHHHHHHHHHHHHhhcCchhcccccchhhhh Q lcl|Aclame:pro 268 KFNKAQISMIYKVPLHKLNELDK-ATFSNIEHQSIEYVR-------NTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNI 339 (416) Q Consensus 268 ~~~~~~Ia~~~gvp~~~lg~~~~-~~~s~~e~~~~~f~~-------~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~ 339 (416) ......||.+.+||..+|.+... |-.++.+.....|+. .-+.|.+..+-+.|-+..+... ..+ +.|.+ T Consensus 343 ~~~~~~iAaa~~IP~t~LfG~sp~GlnstGe~D~~~yyd~I~s~Qe~~l~p~le~l~~~l~~s~~g~~--~~d--~~~~f 418 (532) T protein:vir:94 343 AQSQEQMAAVSHIPLVKLLGITPNGLNASSDGEIRVWYDFIAGYQATNLTPLMEWIIDLIQLSEYGQI--DPG--LAWEW 418 (532) T ss_pred HHHHHHHHhHhCCCeeeeecCCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCC--ceEEe Confidence 88888999999999997754433 333444555556655 3477888877777765544321 223 44555 Q ss_pred hhhhhccHHHHH-------HHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccccccccc---------ccccC Q lcl|Aclame:pro 340 DSELRGDSKTQA-------EYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEY---------QRLKA 403 (416) Q Consensus 340 ~~l~~~d~~~~~-------~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~---------~~~~~ 403 (416) ++|...+.++++ +++.+++++|++++||+|++++..|..+.+.....-+. ++..... .+.+. T Consensus 419 ~pL~~~s~kEkAei~~~~a~a~~~~~~~Gvi~~~Evr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 496 (532) T protein:vir:94 419 SPLMELDDKELAEVRQLNASTDSTLMELGVIDAKMVQQRLAADPTSGYAGALGERDE--LDDVEEIAKQLMAAALNPPAT 496 (532) T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcCCccccccccccccc--cccccchhhhhcccccCCCCC Confidence 567777776554 55678899999999999999999998776544332111 1111110 00000 Q ss_pred Cc-----ccC--CCCccCCC Q lcl|Aclame:pro 404 GG-----AMK--GGDNKNEG 416 (416) Q Consensus 404 ~~-----~~~--gge~~~~~ 416 (416) +. +.+ +.+.+++. T Consensus 497 ~~~~~~~~~~~~~d~~~~~~ 516 (532) T protein:vir:94 497 APQTPNPQPDSEDDQTDNQP 516 (532) T ss_pred CCCCCCCCCCCCCCCCCCcc Confidence 00 000 11111111 No 109 >protein:vir:103860 Length: 528 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1522 # MgeName: D3112 # Cross-refs: genbank:acc:NP_938234;genbank:gi:38229139;genbank:GeneID:2648175 Probab=99.84 E-value=2.1e-20 Score=128.47 Aligned_cols=405 Identities=11% Similarity=0.021 Sum_probs=238.1 Q ss_pred Ccchhhhccc---cccccccccchhHHHhhhcCccccc---------------c-----ccccHHHHhccHHHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKR---SGSSDHEDGFNNILLNMFGGRKTAS---------------G-----ERVSESNSLVQPDIFACVNVL 57 (416) Q Consensus 1 m~~~~~f~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-----~~~~~~~a~~~~~v~~~i~~i 57 (416) -|++. +++. +....+....-..+...+...++.. + ..+-.+...+.+.|.+|+..+ T Consensus 3 ~~~d~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~il~~a~~gd~~~~~~L~~~m~e~D~~i~s~l~~R 81 (528) T protein:vir:10 3 AIVDI-YGNPLRTQQLRKQQTAHLAGLAKEFANHPAKGLTPAKLAHILIEAEQGHLQAQAELFMDMEERDAHLFAEMSKR 81 (528) T ss_pred eeECC-CCCccccccccchhhhhhhhhhhhhcccCCCCCCHHHHHHHHHhhhCCCHHHHHHHHHHHHhhChHHHHHHHHH Confidence 22222 2221 1111111110000111111111110 0 001111112588899999999 Q ss_pred HHhhccCcceEEeecCCcce-eeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC---CcEEEEEee Q lcl|Aclame:pro 58 SDDIAKLPIHTYKRTDGGIE-RKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH---GYPEALFPL 133 (416) Q Consensus 58 a~~ia~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~---g~~~~l~~l 133 (416) ...|.+++|.|....++... +....-+...|..-| .+.+++..++ +.+++|.++.++++... ..|..+.+. T Consensus 82 k~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~----~f~~~i~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~~~~r 156 (528) T protein:vir:10 82 KRAVLGLDWTIEPPRNASAAEKADAEYLHELLLDLE----GIEDLMLDCM-DGVGHGYSAIELDWSLQGREWLPQAFDHR 156 (528) T ss_pred HHHHhcCCceEecCCCCCHHHHHHHHHHHHHHhCCc----cHHHHHHHHH-hhhhhcceeEEEEEeecCCceeEEEeeee Confidence 99999999999875443221 111111222232222 2444444443 45679999999986443 356789999 Q ss_pred ccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Q lcl|Aclame:pro 134 RPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPR 212 (416) Q Consensus 134 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~ 212 (416) ++.++.+.. +++..+.......+...+++...++.++... ...+|.+.+..+.-..-.-....+....|.+..|.|- T Consensus 157 ~~~~f~~~~--~~~~~l~~~~~~~~g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~yG~P~ 234 (528) T protein:vir:10 157 PQSWFQLNP--DDQDELRLRDNSIAGEVLQPFGWIMHKPRSRSGYVARSGLFRVLAWPYLFKHYSTADLAEMLEIYGLPI 234 (528) T ss_pred cccceeecc--CCCcEEeccCCCCCceeecCCCeEEEeecCCCCCccccchHHHHHHHHHHHHhhHHHHHHHHHHcCCCe Confidence 988766543 3444333323333566777777655565544 4578999999999999999999999999999999999 Q ss_pred eeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCC-hhhHHHHHHHHHHHHHHHHHhccchhhccc---c Q lcl|Aclame:pro 213 GILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMP-LQEAQFVESMKFNKAQISMIYKVPLHKLNE---L 288 (416) Q Consensus 213 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~---~ 288 (416) .+.+.+...++++.+.+.+.+....+. ..+|++.|++++-++.+ ..-..+.+..++..++|+.+. +--.+-.. . T Consensus 235 ~igky~~~a~~~ek~~L~~al~~i~~~-~~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i-LGqtlTs~~~~g 312 (528) T protein:vir:10 235 RLGKYPPGTPDEEKVTLLRAVTGLGHA-AAGIIPESMSIDFQEASKGSAEPFMAMMRWCDDSMSKAI-LGGTLTSQTSES 312 (528) T ss_pred EEEecCCCCCHHHHHHHHHHHHHHhhC-cEEEecCCceeEEeecCCCChhHHHHHHHHHHHHHHHHH-hhhhhhcccccc Confidence 999999888999999999888776654 36777878777665532 223357788889999988776 21222211 1 Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhccc-------ccchhhhhhhhhhccHHHHHHHHHHHHhCC Q lcl|Aclame:pro 289 DKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKS-------GHYVKFNIDSELRGDSKTQAEYLKTLHETG 361 (416) Q Consensus 289 ~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~-------~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g 361 (416) ..|+++-.+ .........+.-.+++|++.||+.|+.+.-... ..+.+|.++.....|.+..++...+++..| T Consensus 313 ~~gS~Alg~-vh~~v~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~~~~~e~eDl~~~a~~~~~L~~~G 391 (528) T protein:vir:10 313 GGGAYALGQ-VHNEVRHDLLAADARQLAATLSRDLLWPLLVLNRSGNLDARRAPRLVFDLKDRADLAAMATSLPPLVKLG 391 (528) T ss_pred ccchhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEecCCCcccHHHHHHHHHHHHhCC Confidence 123333322 334556777888999999999998754332211 012334444556788889999999999999 Q ss_pred C-cCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCc--ccCCCCccCCC Q lcl|Aclame:pro 362 V-LNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGG--AMKGGDNKNEG 416 (416) Q Consensus 362 ~-~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~--~~~gge~~~~~ 416 (416) + ++..++|+.+|+|.-..++.+..+....+.............. ...+....++- T Consensus 392 ~~i~~~~i~e~~gip~p~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (528) T protein:vir:10 392 VQVPVNWVQEQLGIPLPANGEAVLGDQAGAGIAQLSRRPGPRIAALAQVIGPRYRDQE 449 (528) T ss_pred CCCCHHHHHHHhCCCCCCCCcccccCCCcccccccCcccccccccccccccccccccc Confidence 8 9999999999998777777766544332222111111111101 00010111110 No 110 >protein:vir:79647 Length: 435 # NCBI annotation: PorT # Family: family:all:297 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285520;genbank:gi:148734503;genbank:GeneID:5220005 Probab=99.84 E-value=3.2e-21 Score=132.93 Aligned_cols=384 Identities=13% Similarity=0.047 Sum_probs=214.6 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcc--cccccccc----HHHHhccHHHHHHHHHHHHhhccCcceEEeecCC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRK--TASGERVS----ESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDG 74 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 74 (416) |++..--+++... ..+++.+.+....+... .......+ ...|.+++.++++|+.+|.++-+-.+++...++. T Consensus 1 ~~~~m~~~~~~~~--~~D~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Y~~~~l~~~~Vd~~aed~~r~g~~i~g~~~~ 78 (435) T protein:vir:79 1 MGVFMSDKVKAIT--KEDGYNEIFGSKDGTFRPNAFYMQRAAFKALSQFYEEDGMARRIVDVIPEEMVTPGFKVDGVKNE 78 (435) T ss_pred CCcccccccccch--hhcchhhhhcccccccccCcccCCcCCHHHHHHHHhcCchhhhhhccchHHhhcCCceecCCChH Confidence 8765433333322 23344333322111110 11111122 2345678889999999999999988887432211 Q ss_pred cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEee-c---------CCCcEEEEEeeccceEEEEEc- Q lcl|Aclame:pro 75 GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQF-G---------SHGYPEALFPLRPDYTNAYVH- 143 (416) Q Consensus 75 ~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r-~---------~~g~~~~l~~l~p~~v~~~~~- 143 (416) . . +...-... ...+-+...+....++|.+++++.. + ..|....+.++++.++++... T Consensus 79 ---~-----~---~~~~~~~l-~~~~~l~~a~~~~rl~G~~~i~i~~~d~~~~~~Pl~~~g~i~~i~v~d~~~i~~~~~~ 146 (435) T protein:vir:79 79 ---K-----S---FKSRWDEL-RLNAKIIDALSWSRLFGGSAILAVVADNKMLKSPVKPGAQLEDIRVYDRYQITIHERE 146 (435) T ss_pred ---H-----H---HHHHHHHh-hHHHHHHHHHHhhhccccEEEEEEecCCCCcccccccCCceeeEEeechhhccchhhc Confidence 1 1 11111111 2234455555556678988888763 2 234455888888888765432 Q ss_pred ------CCCcEEEEEEeeCC--eeEEechhheeeeccCC-------CCccccccHH-HHHHHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 144 ------PTTGMLWYQTVLNG--KAIELYDYEVLHFKGLS-------TDGIHGKSPI-GVVREHIGAQAAATKYNAKLYKN 207 (416) Q Consensus 144 ------~~~~~~~~~~~~~~--~~~~~~~~~vih~~~~~-------~~~~~G~s~~-~~~~~~i~~~~~~~~~~~~~~~n 207 (416) ..|.+.+|.+...+ ..+.+-++.|+|+.... ..+.+|.|++ ..+.+.+............++.. T Consensus 147 ~dp~sp~fg~P~~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~e~~~~~l~~~~~~~~~~~~l~~~ 226 (435) T protein:vir:79 147 TNARSVRYGEPKLYKISPGGDIPEFFVHYSRICIIDGERVSNEKRRQNDGWGASILNKRLIEAIVDYNYCQELATQLLRR 226 (435) T ss_pred cCCcccccCcceEEEEecCCCCCceEEcceeEEEecCCcchhhhccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 23556667665443 35678889999986422 2457799987 67889899888888888887766 Q ss_pred cCCcceeeccCC---cC-CHHHHHHHHHHHH---Hhhc-CCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 208 EATPRGILKVPA---FL-DEKPKENVRKEWK---RVNK-VENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYK 279 (416) Q Consensus 208 ~~~~~~v~~~~~---~~-~~e~~~~~~~~~~---~~~~-~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~g 279 (416) ..... ++.++ .+ +.+....+.+++. ...+ .+.+++..++.+|+.++.+..++ .+........||.+.+ T Consensus 227 ~~~~v--~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~i~~~~e~~e~~~~~lsgl--~~~~~~~~~~iaaa~~ 302 (435) T protein:vir:79 227 KQQAV--WKARDLALMCDDEEGRYAARLRLAQVDDESGVGKAIGIDATDEEYEVLNSDVSGV--PEFLQEKIDRIVALTG 302 (435) T ss_pred hcCcc--ccchhHHHhhcCccchHHHHHHHHHHHHhcCCCCceeEecCCcceEEEecccCCH--HHHHHHHHHHHHhhhC Confidence 54332 33322 11 2222333333332 2333 34455656667899988877754 5778888999999999 Q ss_pred cchhhcccccCCCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHH-------H Q lcl|Aclame:pro 280 VPLHKLNELDKATF-SNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQ-------A 351 (416) Q Consensus 280 vp~~~lg~~~~~~~-s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~-------~ 351 (416) ||..+|.+...+.. ++.+....+|+.. |.-+++.....+-.+|+.......++++ .+++|...+.+++ + T Consensus 303 IP~t~L~G~s~~glnstgd~d~~~yyd~-i~~~Qe~~l~p~l~~l~~li~~s~d~~~--~f~pL~~~sekEkAei~~~~a 379 (435) T protein:vir:79 303 IHEIIIKNKNTGGVSASQNTALETFYKL-IDRKRVEDYKPILEFLLPFMISETEWSI--EFEPLSVPSDKDKAEIMAKNV 379 (435) T ss_pred CCeeeeccCCccccccchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCeE--EeCCCCCCCHHHHHHHHHHHH Confidence 99988755544433 5555666666664 3333322222111122211112234444 4566777777544 4 Q ss_pred HHHHHHHhCCCcCHHHHHHHh-CCCCCCC-CCeEeeccCccccccccccccccCCcccCCCCcc Q lcl|Aclame:pro 352 EYLKTLHETGVLNKDEIRELL-ERNPIEN-GDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNK 413 (416) Q Consensus 352 ~~~~~~~~~g~~t~NE~R~~~-gl~p~~g-gd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~ 413 (416) +++++++++|+++++|+|+.+ ...+.-+ .+... ..++.++. .+..+..+||||+ T Consensus 380 ~a~~~~~~~g~i~~~e~r~~L~~~~~~~~~~~~~~-----~~~~~~~d---~~~~~~~e~g~~~ 435 (435) T protein:vir:79 380 ESVVKLKAEQAINLKETRDTLRSICPDLKIMDNDN-----IELPEPED---LDPEPGQEGGLNK 435 (435) T ss_pred HHHHHHHhcCCCCHHHHHHHHHHhccccCCCCccc-----ccCCcccc---CCCCCCCCCCCCC Confidence 567778899999999999987 3222211 11111 11111111 1112344677777 No 111 >protein:vir:99563 Length: 862 # NCBI annotation: minor head protein-like protein # Family: family:all:297 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039808;genbank:gi:126011058;genbank:GeneID:4818258 Probab=99.84 E-value=7.4e-21 Score=130.95 Aligned_cols=396 Identities=13% Similarity=0.084 Sum_probs=213.0 Q ss_pred Ccchhhhccccccccccc----cchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHED----GFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI 76 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 76 (416) |.-+.+-+--.......+ .......+.+... ...+-. ....|.+++.++++|+.+|.++.+-.+.+....++.. T Consensus 98 ~~~Dgl~n~~~~lG~~~~~s~y~~~~~~~~~~~~~-~f~gyq-l~alY~~~~larkiVd~pAeDatR~g~~I~~~~d~~e 175 (862) T protein:vir:99 98 FAMDDGGGAPVPIGAEGKQSSYAVPEALQDWYLSQ-GFIGHQ-ACALIAQHWLVDKACSLAGEDAIRNGWHLKSLGEGEE 175 (862) T ss_pred hhhhcchhhhhhccccccccccccchhcccccccc-CcccHH-HHHHHHhCchhhhhhhhhhHHHhhCCceEeecCcccc Confidence 111111000000000000 0000000000000 000001 1234567888999999999999999999875433211 Q ss_pred eeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec-C---------------CCcEEEEEeeccceEEE Q lcl|Aclame:pro 77 ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG-S---------------HGYPEALFPLRPDYTNA 140 (416) Q Consensus 77 ~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~-~---------------~g~~~~l~~l~p~~v~~ 140 (416) . +......|...-..+--+ +-+...+....++|.+++++..+ . .|.+..|.+++|.++.+ T Consensus 176 ~---~~e~~~~ie~~~~rL~v~-~~l~eair~~RLyGga~ililv~~~D~~~LsqPLn~e~I~kG~lkgl~vlDp~w~~p 251 (862) T protein:vir:99 176 I---DEESLEKFKAIDVEFKVK-ENLIEFNRFKNVFGIRVAIFVVDSEDPDYYEKPFNPDGITPGSYRGISQIDPYWMMP 251 (862) T ss_pred c---CHHHHHHHHHHHHHhhHH-HHHHHHHHhcccccceEEEEEecCcCchhhhcCcCcccccccceeEEEEechhhhcc Confidence 1 111122222222222122 33334444445677777765421 1 23456788888887765 Q ss_pred EE----cCC------CcEEEEEEeeCCeeEEechhheeeeccCCC-------CccccccHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 141 YV----HPT------TGMLWYQTVLNGKAIELYDYEVLHFKGLST-------DGIHGKSPIGVVREHIGAQAAATKYNAK 203 (416) Q Consensus 141 ~~----~~~------~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-------~~~~G~s~~~~~~~~i~~~~~~~~~~~~ 203 (416) .. ..+ +.+.+|.+. ...+-++.|+++..... ..+.|+|.++.+.+.+............ T Consensus 252 ~~v~~~~~Dp~sp~yGkP~~y~I~----g~~IH~SRliif~g~~vpd~lk~ay~f~G~SvLe~iyd~L~~~d~t~~saa~ 327 (862) T protein:vir:99 252 MLTAESTADPSSQFFYEPEFWIIS----GQKYHRSHLIIARGPQPADILKPTYIFGGIPLVQRIYERVYAAERTANEAPL 327 (862) T ss_pred cccccccccccccccCCceeeeec----CeeeccceeEEecCCCchhhhhccCCccCccHHHHHHHHHHHHHHHHHHHHH Confidence 32 111 333444432 23566778888765322 2457999999999999999999999999 Q ss_pred HHhccCCcceeeccCC--cCC-HHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhcc Q lcl|Aclame:pro 204 LYKNEATPRGILKVPA--FLD-EKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKV 280 (416) Q Consensus 204 ~~~n~~~~~~v~~~~~--~~~-~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gv 280 (416) ++.+.... +++++. .+. ++...+-.+.+....+..++++++.+.+|+.++.+...+. +........||.+.+| T Consensus 328 Ll~ka~l~--v~ktd~l~~l~~ed~l~~r~~~~~~~rdN~Gi~liD~eEe~e~ls~slSGL~--dll~~~~q~IAaas~I 403 (862) T protein:vir:99 328 LAMNKRTT--AIHTDTAKAIANEDKFIQRLMFWVRYRDNHAVKVLGTDETMEQFDTSLADFD--AVIMGQYQLVASIAKT 403 (862) T ss_pred HHHHhccc--eeechhHhhhccHHHHHHHHHHHHhccCcceeEEecCCCceeEEecccCChH--HHHHHHHHHHHhhhCC Confidence 88886544 334332 222 2222221222334445567899999999999988877554 6777778899999999 Q ss_pred chhhccccc-CCCcccHHHHHHHHHH-------HHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHH Q lcl|Aclame:pro 281 PLHKLNELD-KATFSNIEHQSIEYVR-------NTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAE 352 (416) Q Consensus 281 p~~~lg~~~-~~~~s~~e~~~~~f~~-------~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~ 352 (416) |..+|.+.. .|..++.++...+||. .-|.|++..+...+...+.. ..+ +.|.++.|...+.+++++ T Consensus 404 P~tiLfGqspaGlnATGE~D~~nYyD~I~s~QE~~L~P~LerL~~li~~~lg~----~~d--~~ieFnpL~~~sekEkAE 477 (862) T protein:vir:99 404 PATKLLGTAPKGFNSTGEFETISYHEELESIQEHVYMPFLQRHYLISRLSLGI----QHE--IDVVMEPVASMTAQQQAD 477 (862) T ss_pred CceeecccCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCc--ceEEeCCCCCCCHHHHHH Confidence 999765544 5666666767777776 45778888887776554432 223 455556888888877764 Q ss_pred -------HHHHHHhCCCcCHHHHHHHh------CCCCCCCCCeE----eeccCccccccccccccccCCcc--------- Q lcl|Aclame:pro 353 -------YLKTLHETGVLNKDEIRELL------ERNPIENGDKY----ISSLNYVFLDFLEEYQRLKAGGA--------- 406 (416) Q Consensus 353 -------~~~~~~~~g~~t~NE~R~~~------gl~p~~ggd~~----~~~~n~~~~~~~~~~~~~~~~~~--------- 406 (416) ++++++++|+++++|+|++| |++.++..|.- ..+.+....+.....+.....+. T Consensus 478 i~kk~Aea~~~lv~sGvispdEvR~~L~~~~~~g~~~l~ded~E~d~~~~~e~~~~~e~~g~a~~~ap~de~~aga~~~~ 557 (862) T protein:vir:99 478 LNKTKAEGGKVLIDGGVISPDEERNRIRDDKRSGYNRLTKEDAEETPGASPENLAAYQKAGAAQETASAKETQAGAAVTT 557 (862) T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHhcCCcCCCCCCcccccccCCCCcccccccccCCcccccccccccccccCCcc Confidence 46788999999999999976 45544332211 11112211111111110000000 Q ss_pred -------------cCCCCccCC--C Q lcl|Aclame:pro 407 -------------MKGGDNKNE--G 416 (416) Q Consensus 407 -------------~~gge~~~~--~ 416 (416) .++|...-+ | T Consensus 558 ~e~d~~~~p~~~~~~~g~~~~~t~~ 582 (862) T protein:vir:99 558 AEGDQPNVQMVPSMKPGQMVGPEVG 582 (862) T ss_pred ccCCcccccccCCCCCCCccccccc Confidence 001100000 0 No 112 >protein:vir:99232 Length: 526 # NCBI annotation: putative portal protein # Family: family:all:313 # MgeID: mge:1649 # MgeName: DMS3 # Cross-refs: genbank:acc:YP_950451;genbank:gi:119953652;genbank:GeneID:4643092 Probab=99.83 E-value=4.4e-20 Score=126.69 Aligned_cols=405 Identities=10% Similarity=0.012 Sum_probs=238.1 Q ss_pred Ccchhhhcc---cccccccc----ccchhHHHhhhcCcccc----------------ccccccHHHHhccHHHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEK---RSGSSDHE----DGFNNILLNMFGGRKTA----------------SGERVSESNSLVQPDIFACVNVL 57 (416) Q Consensus 1 m~~~~~f~~---~~~~~~~~----~~~~~~~~~~~~~~~~~----------------~~~~~~~~~a~~~~~v~~~i~~i 57 (416) -|++. .++ ++..+.+. ......+....+.+-+. ....+..+...+.+.|.+|+..+ T Consensus 3 ~~~d~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~iLr~a~~gd~~~~~~L~e~m~e~D~~i~s~l~~R 81 (526) T protein:vir:99 3 QIVDV-YGNPIRTQQLREPQTSRLAGLAKEFAQHPAKGLTPAKLARILVEAEQGNLQAQAELFMDMEERDAHLFAEMSKR 81 (526) T ss_pred eeECC-CCCccccccccchhhhhhhhhhhhhcccCcCCCCHHHHHHHHHhhhCCCHHHHHHHHHHHHhhChHHHHHHHHH Confidence 12221 111 11111110 00001111110000000 00011112112578999999999 Q ss_pred HHhhccCcceEEeecCCcce-eeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC---CcEEEEEee Q lcl|Aclame:pro 58 SDDIAKLPIHTYKRTDGGIE-RKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH---GYPEALFPL 133 (416) Q Consensus 58 a~~ia~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~---g~~~~l~~l 133 (416) ...|.+++|.|....++... +....-+...|...| .+.+++..++ +.+.+|-++.++++... -.|..+.+. T Consensus 82 k~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~----~~~~~i~~~l-da~~~G~s~~Eivw~~~~g~~~~~~l~~r 156 (526) T protein:vir:99 82 KRAILGLDWAVEPPRNASAAEKADADYLHELLLDLE----GLEDLLLDAL-DGIGHGYSCIELEWALQGREWMPLAFHHR 156 (526) T ss_pred HHHHhCCCceEecCCCCCHHHHHHHHHHHHHHhccc----CHHHHHHHHH-HhhhhcceeEEEEEeecCCceeEEEeeee Confidence 99999999999875443221 111112222333323 3566666666 46789999999986543 357789999 Q ss_pred ccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Q lcl|Aclame:pro 134 RPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPR 212 (416) Q Consensus 134 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~ 212 (416) ++.++.+..+ ++..............+++...+..++. .....+|.|.+..+.-..-.-....+....|.+..|.|- T Consensus 157 ~~~~f~~~~~--~~~~l~~~~~~~~g~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~yG~P~ 234 (526) T protein:vir:99 157 PQSWFQLNPE--DQNELRLRDNSPAGEALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLEIYGLPI 234 (526) T ss_pred cccceeeccC--CCcEEEecCCCCCceeecCCCeEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHHHcCCce Confidence 9987776443 3333333333445567777655444544 445689999999999998888889999999999999999 Q ss_pred eeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCC-hhhHHHHHHHHHHHHHHHHHhccchhhccc---c Q lcl|Aclame:pro 213 GILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMP-LQEAQFVESMKFNKAQISMIYKVPLHKLNE---L 288 (416) Q Consensus 213 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~---~ 288 (416) .+.+.+...++++.+.+.+.+....+ ...++++.|++++-+..+ .....+.+..++..++|+.++ +--.+-.. . T Consensus 235 ~igky~~~a~~~ek~~L~~av~~i~~-d~~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i-LGqtlTs~~~~g 312 (526) T protein:vir:99 235 RLGKYPPGTADEEKATLLRAVTGLGH-AAAGIIPETMAIDFQQAAQGSSEPFLAMMRQSEDAISKAV-LGGTLTSTTSQS 312 (526) T ss_pred EEEecCCCCCHHHHHHHHHHHHHHhh-CcEEEecCCceeEEeecCCCCHHHHHHHHHHHHHHHHHHH-hhhhhccccccC Confidence 99999888889999899888877755 347788888777665542 233457788889999998775 21222111 1 Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccc-------cchhhhhhhhhhccHHHHHHHHHHHHhCC Q lcl|Aclame:pro 289 DKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSG-------HYVKFNIDSELRGDSKTQAEYLKTLHETG 361 (416) Q Consensus 289 ~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~-------~~~~f~~~~l~~~d~~~~~~~~~~~~~~g 361 (416) ..|+++..+ ....-....+.-.+++|++.||+.|+.+.-.... .+.+|.++.....|.+.+++.+.++++.| T Consensus 313 ~~gS~a~g~-vh~~v~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~~e~eDl~~~a~~~~~L~~~G 391 (526) T protein:vir:99 313 GGGAFALGQ-VHNEVRHDLLASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDLREQADITSMAQSIPALVNVG 391 (526) T ss_pred cchhhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCCCCcccHHHHHHHHHHHHhCC Confidence 123343333 3345566677889999999999877543322211 12234444456788889999999999999 Q ss_pred C-cCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCC-CCccCCC Q lcl|Aclame:pro 362 V-LNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKG-GDNKNEG 416 (416) Q Consensus 362 ~-~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~g-ge~~~~~ 416 (416) + ++..++|+.+|+|....++.++.+..-.+.................+ ...+.+. T Consensus 392 ~~i~~~~i~e~~Gip~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (526) T protein:vir:99 392 LEIPSAWVYDKLGIPQPAKNEPVLRSAAQPAILSRQHGQRVAALATIVGPRYGDQQA 448 (526) T ss_pred CccCHHHHHHHhCCCCCCCcccccCCCCCCcccccccccccccccccccccCcchhh Confidence 8 99999999999987766666654432111111110000000000001 1111111 No 113 >protein:vir:79233 Length: 526 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1867 # MgeName: Phage MP22 # Cross-refs: genbank:acc:YP_001469155;genbank:gi:157834998;genbank:GeneID:5648814 Probab=99.83 E-value=6.9e-20 Score=125.63 Aligned_cols=405 Identities=10% Similarity=0.018 Sum_probs=238.2 Q ss_pred Ccchhh---hccccccc---cccc------------c-----chhHHHhhhcCccccccccccHHHHhccHHHHHHHHHH Q lcl|Aclame:pro 1 MLLERM---FEKRSGSS---DHED------------G-----FNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVL 57 (416) Q Consensus 1 m~~~~~---f~~~~~~~---~~~~------------~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~i 57 (416) -|++.. ++.....+ .... + +...+..+-.|... ....+-++...+.+.|.+|+..+ T Consensus 3 ~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~il~~a~~gd~~-~~~~L~edm~e~D~~i~s~l~~R 81 (526) T protein:vir:79 3 QIVDVYGNPIRPQQLREPQTSRLAGLAKEFAQHPAKGLTPAKLARILVEAEQGNLQ-AQAELFMDMEERDAHLFAEMSKR 81 (526) T ss_pred eeeCCCCCccCccccchhhhhhhhhhhhhcccCCCCCcCHHHHHHHHHHhhCCCHH-HHHHHHHHHHhhChHHHHHHHHH Confidence 111111 11000000 0000 0 00111111111000 00011112122578899999999 Q ss_pred HHhhccCcceEEeecCCcce-eeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC-C--cEEEEEee Q lcl|Aclame:pro 58 SDDIAKLPIHTYKRTDGGIE-RKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH-G--YPEALFPL 133 (416) Q Consensus 58 a~~ia~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~-g--~~~~l~~l 133 (416) ...|.+++|.|....++... +....-+...|...| .+.+++..++. .+.+|-++.++++... | .|..+.+. T Consensus 82 k~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~----~~~~~i~~~ld-A~~~G~s~~Ei~w~~~~g~~~~~~l~~r 156 (526) T protein:vir:79 82 KRAILGLDWAVEPPRNASAAEKADADYLHELLLDLE----GLEDLLLDALD-GIGHGYSCIELEWALQGREWMPLAFHHR 156 (526) T ss_pred HHHHhCCCceEecCCCCChHHHHHHHHHHHHHhccc----CHHHHHHHHHh-hhhhcceeEEEEEeecCCceeEEEeeee Confidence 99999999999875543221 111111222333323 35566666655 5679999999986543 2 46789999 Q ss_pred ccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Q lcl|Aclame:pro 134 RPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPR 212 (416) Q Consensus 134 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~ 212 (416) ++.++.+..+ ++..............+++...+..++.. ....+|.+.+..+.-..-.-....+....|.+..|.|- T Consensus 157 ~~~~F~~~~~--~~~~l~~~~~~~~g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~F~E~yG~P~ 234 (526) T protein:vir:79 157 PQSWFQLNPE--DQNELRLRDNSPAGEALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLEIYGLPI 234 (526) T ss_pred cccceEeccC--CCcEEEecCCCCCceeecCCceEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHHHcCCce Confidence 9887775433 33333323333455677777665555554 44579999999999888888888999999999999999 Q ss_pred eeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCC-hhhHHHHHHHHHHHHHHHHHhccchhhccc---c Q lcl|Aclame:pro 213 GILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMP-LQEAQFVESMKFNKAQISMIYKVPLHKLNE---L 288 (416) Q Consensus 213 ~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~---~ 288 (416) .+.+.+...++++.+.+.+.+....+. ..++++.|++++-++.+ .....|.+..++..++|+.+. +--.+-.. . T Consensus 235 ~igky~~~a~~~ek~~L~~av~~i~~d-a~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i-LGqtlTs~~~~g 312 (526) T protein:vir:79 235 RLGKYPPGTADEEKATLLRAVTGLGHA-AAGIIPETMAIDFQQAAQGSSEPFLAMMRQSEDAISKAV-LGGTLTSTTSQS 312 (526) T ss_pred EEEecCCCCCHHHHHHHHHHHHHHhcC-cEEEecCCceeEEeecCCCCHHHHHHHHHHHHHHHHHHH-hhhhhccccccC Confidence 999999888888888888888877653 47888888877766542 233457788889999998774 21222211 1 Q ss_pred cCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhccccc-------chhhhhhhhhhccHHHHHHHHHHHHhCC Q lcl|Aclame:pro 289 DKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGH-------YVKFNIDSELRGDSKTQAEYLKTLHETG 361 (416) Q Consensus 289 ~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~-------~~~f~~~~l~~~d~~~~~~~~~~~~~~g 361 (416) ..|+++..+ ....-....+.-.+++|++.||+.|+.+.-..... +.+|.++.....|.+.+++.+.+++..| T Consensus 313 ~~gS~a~g~-vh~~v~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~~e~eDl~~~a~~~~~L~~~G 391 (526) T protein:vir:79 313 GGGAFALGQ-VHNEVRHDILASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDLREQADITSMAQSIPALVNVG 391 (526) T ss_pred cchhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCCCCcccHHHHHHHHHHHHhCC Confidence 223444433 33455667788899999999999876443322211 2234444556788899999999999999 Q ss_pred C-cCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 362 V-LNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 362 ~-~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) + ++..++|+.+|+|....++.+..|............+.........+....++- T Consensus 392 ~~i~~~~i~e~~gip~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (526) T protein:vir:79 392 LEIPSAWVYDKLGIPQPAKNEPVLRPAAQPAILSRQHGQRVAALATIVGPRYGDQQ 447 (526) T ss_pred CcCCHHHHHHHhCCCCCCCchhhccccCCccccccccccccccccccccccCchhh Confidence 8 999999999999866666665544321111111111110000001111111111 No 114 >protein:vir:108215 Length: 469 # NCBI annotation: gp6 # Family: family:all:2372 # MgeID: mge:2004 # MgeName: Giles # Cross-refs: genbank:acc:YP_001552335;genbank:gi:160700655;genbank:GeneID:5758935 Probab=99.83 E-value=8.1e-20 Score=125.24 Aligned_cols=399 Identities=11% Similarity=0.040 Sum_probs=247.6 Q ss_pred hhcccccccc-ccccch--hHHHhhhc------Ccccc---ccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 6 MFEKRSGSSD-HEDGFN--NILLNMFG------GRKTA---SGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 6 ~f~~~~~~~~-~~~~~~--~~~~~~~~------~~~~~---~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) +.+.-...+. .+.+.. .-+..... ..... ....+-++...+.+.|.+|++.+...|.+++|+|...++ T Consensus 1 ~~~~~~~~~p~~~~g~~~~~~~~~~~~~~~~~e~~~~lr~~~~~~ly~~m~e~D~~i~s~l~~rk~av~~~~w~v~p~~~ 80 (469) T protein:vir:10 1 MTERVKTAAPVSEAGYVFGSGVVDGWTVWDPFEQTPELQWPQSVAVYSRMDNEDSRVTSLLEAISLPIRSTPWRIRANGA 80 (469) T ss_pred CCCcccCCCCccchhhhhhcccccchhhccccccccccccccchHHHHHHHhhChHHHHHHHHHHHHHhcCCceEecCCC Confidence 2232221111 111110 00000000 00000 111122222235889999999999999999999976544 Q ss_pred Ccceeeeccchhhhhcccc-------------ccccCHHHHHHHHHHHHHHcCCeEEEEeecCC-----C--cEEEEEee Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARP-------------NPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH-----G--YPEALFPL 133 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~P-------------N~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~-----g--~~~~l~~l 133 (416) +.. ........| ..+ +-..+|.+++..++.+.+.+|-++.++++... | .+..|.+. T Consensus 81 ~~e---~~~~~~~~L-~~~~~~~~~~~~~~~~~~~~~w~~~l~~~l~~a~~~G~s~~Eivw~~~~~~~dG~~~~~~l~~r 156 (469) T protein:vir:10 81 SDE---VTEFVSRNL-MVPIDGEDDVRNPGRSRGRFSWAEHLEEVTSPTLQFGHAVFEQVYRPRNQSPDGRFWLRKLAPR 156 (469) T ss_pred CHH---HHHHHHHHH-HhhhhhhhhhhhhhhhhccccHHHHHHHHHHHhhhhCceeeeeeeecccccCCCceeeeeeeec Confidence 321 111112222 111 12346888999988888899999999987532 3 36677777 Q ss_pred ccceE-EEEEcCCCcEEEEEEe------------eCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 134 RPDYT-NAYVHPTTGMLWYQTV------------LNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATK 199 (416) Q Consensus 134 ~p~~v-~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~ 199 (416) ++.++ ....+.+++...+... .....+.+|+...++.++... ...+|.|.+..|.-..-.-....+ T Consensus 157 p~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lp~~k~i~~~~~~~~g~p~g~gLlr~~~~~~~fK~~~~~ 236 (469) T protein:vir:10 157 PQWTISKFNVAPDGGLESIEQIAPPARTRGSLYVANIAPPEIPVNRLVVYTRNKRPGQWQGKSILRSAYKHWLLKDKLLR 236 (469) T ss_pred CcccceeeeeccCCceeeeeecCcccccccccccCCCCccccccCcEEEEEecCCCCCcccchhHHHHHHHHHHHHHHHH Confidence 77655 3445555555544321 122345677877777766654 457999999999999999999999 Q ss_pred HHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcC-CceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 200 YNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKV-ENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIY 278 (416) Q Consensus 200 ~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~ 278 (416) ....+.+..+.|--+.+.+...++++.+.+.+......++ ...++++.|++++-++.+.+...+.+..++..++|+.+. T Consensus 237 ~w~~f~EryG~P~~vgky~~~a~~~ek~~l~~a~~~~~~g~~a~~iip~~~~ie~~ea~g~~~~~~~li~~~d~~Isk~i 316 (469) T protein:vir:10 237 IEAATAERNGMGIPVGTASSATDEDEVRKMAALARSVRGGINAGVGLAQGQILELLGVSGNLPDIRRAIEGHDRSIALSG 316 (469) T ss_pred HHHHHHHHcCCcceEEecCCCCCHHHHHHHHHHHHHHhcCCceEEEccCCceEEEeecCCCchHHHHHHHHHHHHHHHHH Confidence 9999999999999999999888999998888888877644 346789999998888777776778899999999998876 Q ss_pred ccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcc----cccchhhhhhhhhhccHHHHHHHH Q lcl|Aclame:pro 279 KVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQK----SGHYVKFNIDSELRGDSKTQAEYL 354 (416) Q Consensus 279 gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~----~~~~~~f~~~~l~~~d~~~~~~~~ 354 (416) --. .+-....+|+++-. +.........+.-.+++|++.||+.|+.+.-.. ...+.+|.++... .+.+..++.+ T Consensus 317 LG~-tlTs~~~gGS~a~~-~vh~ev~~d~~~sDa~~i~~tln~~li~~l~~lN~g~~~~~P~~~~~~~e-~~~~~~a~~i 393 (469) T protein:vir:10 317 LAH-FLNLDGKGGSYALA-SVLEDPFTQAVHAYATSICRIANQHIIEDLVDINFGVDTPAPVLTFDPIG-SRQDLTAAAV 393 (469) T ss_pred hcc-cccccCccchhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEecCCC-CcHHHHHHHH Confidence 332 12222233455443 344566677788899999999999876532211 1222344444443 4667788999 Q ss_pred HHHHhCCC-----cCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 355 KTLHETGV-----LNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 355 ~~~~~~g~-----~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +++++.|+ .+.+.+|+.+|+|+-..++....+.. |.- .+.+...+....+++..+.. T Consensus 394 ~~l~~~G~~~~~~~~~~~~~e~~gip~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~ 455 (469) T protein:vir:10 394 KLLYDAGVFDDDPAVKRAIRQRFNLPSELNDTPSAEPEE--PAA---VPNQSAAPARTRSSGNADAR 455 (469) T ss_pred HHHHhcCCccCccccHHHHHHHhCCCCCCCCcccccchh--ccc---CCCCCccccccCCCCCcccc Confidence 99999999 45678999999997766665443321 100 01111111111111111111 No 115 >protein:vir:104338 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398967;genbank:gi:81343951;genbank:GeneID:3778870 Probab=99.80 E-value=1e-19 Score=124.76 Aligned_cols=374 Identities=12% Similarity=0.033 Sum_probs=206.0 Q ss_pred ccccccchhHHHhhhcCccc-ccccccc----HHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhh Q lcl|Aclame:pro 14 SDHEDGFNNILLNMFGGRKT-ASGERVS----ESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAV 88 (416) Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l 88 (416) =...+++.+.+.+.-.+... ......+ ...+.+++.++++|+.+|.++-+-.|++...++. ..... .+..| T Consensus 1 ~~~~D~~~n~~~gg~~~~~~~~~~~~~~~~~l~a~Y~~~~l~~~~Vd~~aed~~r~g~~i~~~~~~---~~~~~-~~~~l 76 (422) T protein:vir:10 1 MVKTDSYANIFLGGSDGSEIYGSLQNQAPTILASLYADNALVRRIIDTIPETALAAGFHIDGIDDE---PAFWS-RWDDL 76 (422) T ss_pred CccchhhHHHHcCCCCCccccCcccccCHHHHHHHHHhChhhHHHHhhhhHHHhcCCccccCCCHH---HHHHH-HHHHh Confidence 11111222221110000000 0111111 2345578889999999999999988887432111 11111 11122 Q ss_pred ccccccccCHHHHHHHHHHHHHHcCCeEEEEee-c---------CCCcEEEEEeeccceEEEEEc-------CCCcEEEE Q lcl|Aclame:pro 89 YARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQF-G---------SHGYPEALFPLRPDYTNAYVH-------PTTGMLWY 151 (416) Q Consensus 89 ~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r-~---------~~g~~~~l~~l~p~~v~~~~~-------~~~~~~~~ 151 (416) ...+-+...+....++|.+++++.. + ..|....+.++++.++++... ..|.+.+| T Consensus 77 --------~~~~~l~~a~~~~rl~G~a~i~i~v~d~~~~~~Pl~~~g~~~~l~v~d~~~i~~~~~~~dp~s~~fg~P~~y 148 (422) T protein:vir:10 77 --------EMTQNINDAWSWARLFGGAAIVAIVKDNRALTSPVREGAELETVRVYDRTQVKVQTREENPRNARFGEPLTY 148 (422) T ss_pred --------hHHHHHHHHHHhhccccceEEEEEecCCCCccccccccCceeeEEeeccccccchhcccCccccccCcceEE Confidence 2334455555666689999998864 2 245566888999988876432 23556666 Q ss_pred EEeeCC--eeEEechhheeeeccCC-------CCccccccHHHH-HHHHHHHHHHHHHHHHHHHhccCCcceeeccCC-- Q lcl|Aclame:pro 152 QTVLNG--KAIELYDYEVLHFKGLS-------TDGIHGKSPIGV-VREHIGAQAAATKYNAKLYKNEATPRGILKVPA-- 219 (416) Q Consensus 152 ~~~~~~--~~~~~~~~~vih~~~~~-------~~~~~G~s~~~~-~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~-- 219 (416) .+...+ ..+.+-++.|+|+.... ..+.+|.|++.. +.+.+............++...... +++.++ T Consensus 149 ~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~~~~~~~--v~~~~~l~ 226 (422) T protein:vir:10 149 RITTNESDMFYDVHYSRIHIIDGERIPNVMRRQNDGWGRSVLSSDILDSIKDYTNCERLATQLLKRKQQA--VWKAKGLA 226 (422) T ss_pred EEecCCCCcceeeccceeEEeCCCCchhhhcccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cccchhHH Confidence 665433 23677788899986432 235689999986 6788888888888888877776543 333332 Q ss_pred -cC-CHHHHHHHHHHHHHh---h-cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc Q lcl|Aclame:pro 220 -FL-DEKPKENVRKEWKRV---N-KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF 293 (416) Q Consensus 220 -~~-~~e~~~~~~~~~~~~---~-~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~ 293 (416) .. +........++++.. . +.+.+++..++.+|++++.+...+ .+.......+||.+.+||..+|.+...+.. T Consensus 227 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~e~~e~~~~~lsgl--~~~~~~~~~~iaaa~~IP~t~L~G~s~~Gl 304 (422) T protein:vir:10 227 ELCDDSEGFGAARLRLAQVDNNSGVGQAIGIDAESEEYSVLNSDIGGI--DAFLDKKFDRIVALSGIHEIILKNKNVGGV 304 (422) T ss_pred HhcCCccchHHHHHHHHHHHHhcCCccceeEecCCcceEEEecccCCh--HHHHHHHHHHHHhhhCCCeeeeccCCcccc Confidence 11 222333334444322 2 334455666678999998888754 577888899999999999998865544443 Q ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHH-------HHHHHHHHHhCCCcCH Q lcl|Aclame:pro 294 -SNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKT-------QAEYLKTLHETGVLNK 365 (416) Q Consensus 294 -s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~-------~~~~~~~~~~~g~~t~ 365 (416) ++.++..++||.. |.-+++.....+-.+|+..-.+..+++++| ++|...+.++ .++++++++++|++++ T Consensus 305 natgd~d~~~yyd~-i~~~Qe~~l~p~l~~l~~~i~~s~~~~~~f--~pL~~~sekekaei~~~~a~a~~~~~~~g~i~~ 381 (422) T protein:vir:10 305 SSSQNTALETFHKL-VDRKRNAELLPILEFLIPFIVNAEEWSVEF--NPLAQESSKDKAEILEKNVNSIAALIAAGAMDI 381 (422) T ss_pred cccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcccCCcEEEe--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCH Confidence 4456666666664 333333222211122222222233445554 4666666654 4466788889999999 Q ss_pred HHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCC Q lcl|Aclame:pro 366 DEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGD 411 (416) Q Consensus 366 NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge 411 (416) +|+|+.|--.... ..+..+..+.+.. ..+....+.....+| T Consensus 382 ~e~r~~L~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~d 422 (422) T protein:vir:10 382 DEARDTLRTIAPE----VKINDGSVETEVT-ISETSNDPLEVPTDD 422 (422) T ss_pred HHHHHHhhhhccc----ccCCCCCCccccc-hhhcCCCCCCCCCCC Confidence 9999988332211 1111111221111 111111111111111 No 116 >protein:vir:96068 Length: 765 # NCBI annotation: conserved hypothetical protein ORF017 # Family: family:all:297 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294434;genbank:gi:149408331;genbank:GeneID:5237187 Probab=99.79 E-value=1.7e-19 Score=123.50 Aligned_cols=398 Identities=13% Similarity=0.074 Sum_probs=213.0 Q ss_pred Ccchh------------------hhccccccc----cccccchhHHHhhhcCccccc-c----------ccc---cHHHH Q lcl|Aclame:pro 1 MLLER------------------MFEKRSGSS----DHEDGFNNILLNMFGGRKTAS-G----------ERV---SESNS 44 (416) Q Consensus 1 m~~~~------------------~f~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~----------~~~---~~~~a 44 (416) +=+-+ -|+.....- ....+..+.+..+.++..... . ... ....| T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~gyql~alY 117 (765) T protein:vir:96 38 IKLGKIRGWNVEPEKAPVIRSVKDFLEPGLSVAMDSAYGDGPTPAAKAAAGGQNPYVVPTMLQDWYNSQGFIGYQACAII 117 (765) T ss_pred hhHHHHhhcccccccCCCCCCCCcccCcccceeccccccccccchHHHhhhccCccchhhHHHhhhcccCCccHHHHHHH Confidence 11111 111100000 000111122222222111100 0 000 12235 Q ss_pred hccHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec-- Q lcl|Aclame:pro 45 LVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG-- 122 (416) Q Consensus 45 ~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~-- 122 (416) .+++.++.+|+.+|.++-+-.+.+....++ . .......|...-... ...+-+...+....++|-+|+++.-. T Consensus 118 ~~~~l~rkiVd~pAeDa~R~g~~I~~~~~e-~----~~~~~~~l~~~~~rl-~v~~~l~ea~~~~RlyGga~i~i~i~~~ 191 (765) T protein:vir:96 118 SQHWLVDKACSMSGEDAARNGWELKSDGRK-L----SDEQSALIARRDMEF-RVKDNLVELNRFKNVFGVRIALFVVESD 191 (765) T ss_pred HhCchhhhhhhcchHHhhcCCceeecCccc-c----CHHHHHHHHHHHHHh-hHHHHHHHHHHHhhhceeeEEEEEeccc Confidence 578889999999999999988887542211 1 111122222221121 23455555556666788888876432 Q ss_pred --------------CCCcEEEEEeeccceEEEEEc----------CCCcEEEEEEeeCCeeEEechhheeeeccCCC--- Q lcl|Aclame:pro 123 --------------SHGYPEALFPLRPDYTNAYVH----------PTTGMLWYQTVLNGKAIELYDYEVLHFKGLST--- 175 (416) Q Consensus 123 --------------~~g~~~~l~~l~p~~v~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~--- 175 (416) ..|....|..++|.++.+... ..+.+.+|.+. ...+-++.|||+..... T Consensus 192 D~~~l~~PL~~~~I~kg~~kgl~vldp~~~~~~~v~e~~~Dp~sp~fg~P~~y~i~----g~~IH~SRli~~~g~~lpd~ 267 (765) T protein:vir:96 192 DPDYYEKPFNPDGIAPGSYKGISQIDPYWAMPQLTAESTADPSAEHFYEPDFWIIS----GKKYHRSHLVVVRGPQPPDI 267 (765) T ss_pred CcchhhccccccccccceeeEEEEechhhcccccchhccccccccccCcceeeeec----CceeccceEEEecCCCchhh Confidence 113445677777766665321 12233334332 23566788888865432 Q ss_pred ----CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-CHHHHHHHHHHHHHhhcCCceeecCCCce Q lcl|Aclame:pro 176 ----DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-DEKPKENVRKEWKRVNKVENIAIIDYGLE 250 (416) Q Consensus 176 ----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~vl~~g~~ 250 (416) .+++|.|.++.+.+.|............++......-.-+.....+ ++++..+-.+.+....+..++++++.+.+ T Consensus 268 lk~~~~~~G~Svlq~~yd~I~~~~~t~~~~a~Ll~k~~~~v~k~~~~~~l~~~~~l~~r~~~~~~~r~n~g~~~id~ee~ 347 (765) T protein:vir:96 268 LKPTYIFGGIPLTQRIYERVYAAERTANEAPLLAMSKRTSTIHVDVEKAIANEDAFNARLAFWIANRDNHGVKVIGIDET 347 (765) T ss_pred hccccCccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccceeeechHhhhccHHHHHHHHHHHHHhcCCceeEEecCCcc Confidence 3457999999999999999999988888888766543333222222 23333222233444445567899999999 Q ss_pred eEeccCChhhHHHHHHHHHHHHHHHHHhccchhhccccc-CCCcccHHHHHHHHHH-------HHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 251 YQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELD-KATFSNIEHQSIEYVR-------NTLQPWIVNFEQELNVK 322 (416) Q Consensus 251 ~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~-~~~~s~~e~~~~~f~~-------~~l~P~~~~i~~~l~~~ 322 (416) |+.++.+..++ .+........||.+.+||..+|-+.. .|..++.+...++||. .-|.|.+..+-+.|-.. T Consensus 348 ~e~~s~~lsgl--~d~l~~~~~~iAaas~IP~t~LfGqsp~GlnATGe~D~~nYyD~I~s~Qe~~l~p~le~L~~li~~s 425 (765) T protein:vir:96 348 MEQFDTNLSDF--DSVIMNQYQLVAAIAKTPATKLLGTSPKGFNATGEHETISYHEELESIQEHIFDPLLERHYLLLAKS 425 (765) T ss_pred eeEEecccCCH--HHHHHHHHHHHHhhhCCCeeeeccCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 99998887754 47778889999999999998886654 4555666666777776 34555554444444321 Q ss_pred hcCchhcccccchhhhhhhhhhccHHHHH-------HHHHHHHhCCCcCHHHHHHHhCCCCCCCCCe-----EeeccCcc Q lcl|Aclame:pro 323 LFLDHDQKSGHYVKFNIDSELRGDSKTQA-------EYLKTLHETGVLNKDEIRELLERNPIENGDK-----YISSLNYV 390 (416) Q Consensus 323 l~~~~~~~~~~~~~f~~~~l~~~d~~~~~-------~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~-----~~~~~n~~ 390 (416) ..... .+.+.++.|...+.++++ +++++++++|+++++|+|++++.++.-+.+. ........ T Consensus 426 ----~~i~~--d~~i~FnpL~~~sekEkAei~~k~Aea~~~~~~~Gvis~dEvR~~L~~~~~~g~~~l~d~~~e~~~~~~ 499 (765) T protein:vir:96 426 ----ESIDV--QLEIVWNPVDSTTSQQQAELNNKKAATDEIYINSGVVSPDEVRERLRDDPRSGYNRLTDDQAETEPGMS 499 (765) T ss_pred ----cCCCC--cceEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccccCCCCCCCccccccccCCC Confidence 12222 355556688777777665 4588889999999999999986655322111 11111111 Q ss_pred c-----cccccccc--------cccCCcccCCCCccCCC Q lcl|Aclame:pro 391 F-----LDFLEEYQ--------RLKAGGAMKGGDNKNEG 416 (416) Q Consensus 391 ~-----~~~~~~~~--------~~~~~~~~~gge~~~~~ 416 (416) | ++...... +...+.+.-.|..+..+ T Consensus 500 pe~~~~~~~~~~~~~~~~~e~~~~~a~p~~~eg~~~~~~ 538 (765) T protein:vir:96 500 PENLAELEKAGAQSAKAKGEAERAEAQAGAVEGAGDPVP 538 (765) T ss_pred ccccccccCCCcccccccCccccccCCCCccCCCCcccc Confidence 1 11100000 00000000011111111 No 117 >protein:vir:107662 Length: 427 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003893;genbank:gi:45686310;genbank:GeneID:2773002 Probab=99.79 E-value=2.7e-19 Score=122.37 Aligned_cols=368 Identities=11% Similarity=0.068 Sum_probs=209.0 Q ss_pred hhhhccccccccccccchhHHHhh-----hcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCccee Q lcl|Aclame:pro 4 ERMFEKRSGSSDHEDGFNNILLNM-----FGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIER 78 (416) Q Consensus 4 ~~~f~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~ 78 (416) =|+|+ .+++.+.+..- .+...+..+..+ ...+.+++.++++|+.+|.++.+..+++...++. . T Consensus 1 ~~~~~--------~d~~~~~~~~~~~~~~~~~~~~~~~~~l-~a~Y~~~~l~~~~Vd~~aed~~r~g~~i~g~~~~---~ 68 (427) T protein:vir:10 1 MKIVK--------HDGYNDIFNGGADGSPKPFFMSDASYHV-GSFYNDNATAKRIVDVIPEEMVTAGFKMSGVKDE---K 68 (427) T ss_pred CCccc--------cchHHHHhhcCCCCcccCccccCchHHH-HHHHHcCchhhhhhccchHHhhcCCccccCccHH---H Confidence 12222 12222211100 000111111111 2345578889999999999999988887532211 1 Q ss_pred eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEee----------cCCCcEEEEEeeccceEEEEEcC---- Q lcl|Aclame:pro 79 KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQF----------GSHGYPEALFPLRPDYTNAYVHP---- 144 (416) Q Consensus 79 ~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r----------~~~g~~~~l~~l~p~~v~~~~~~---- 144 (416) .... .+..| ...+-+..++....++|.+++++.- ...|.+..+.++++.++++.... T Consensus 69 ~~~~-~~~~l--------~~~~~l~~a~~~~rl~G~a~i~i~v~d~~~l~~p~~~~g~l~~l~v~d~~~~~~~~~~~dp~ 139 (427) T protein:vir:10 69 EFKS-LWDSY--------KLDSSLVDLLCWARLYGGAAMVAIIKDNRMLTSQAKPGAKLEGVRVYDRFAITVEKRVTNAR 139 (427) T ss_pred HHHH-HHHHh--------hHHHHHHHHHHhccccceeEEEEEecCCCccccccCCCcceeEEEEechhcccccccccCcc Confidence 1111 11122 2334455566666789999998743 23567889999999888764332 Q ss_pred ---CCcEEEEEEeeCC--eeEEechhheeeeccCC-------CCccccccHHH-HHHHHHHHHHHHHHHHHHHHhccCCc Q lcl|Aclame:pro 145 ---TTGMLWYQTVLNG--KAIELYDYEVLHFKGLS-------TDGIHGKSPIG-VVREHIGAQAAATKYNAKLYKNEATP 211 (416) Q Consensus 145 ---~~~~~~~~~~~~~--~~~~~~~~~vih~~~~~-------~~~~~G~s~~~-~~~~~i~~~~~~~~~~~~~~~n~~~~ 211 (416) .|.+.+|.+...+ ..+.+-++.|+|+.... ..+.+|.|++. .+.+.+............++...... T Consensus 140 s~~fg~P~~y~v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~~k~~~~ 219 (427) T protein:vir:10 140 SPRYGEPEIYKVSPGDNMQPYLIHHSRVFIADGERVAQQARKQNQGWGASVLNKSLIDAICDYDYCESLATQILRRKQQA 219 (427) T ss_pred ccccCcceEEEEecCCCCcceEEccccEEEecCCCchhhhcccCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHhccc Confidence 3566667665443 23678888999986432 24578999986 57788888888888888777665433 Q ss_pred ceeeccCC---cC-CHHHHHHHHHHHHH---hh-cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchh Q lcl|Aclame:pro 212 RGILKVPA---FL-DEKPKENVRKEWKR---VN-KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLH 283 (416) Q Consensus 212 ~~v~~~~~---~~-~~e~~~~~~~~~~~---~~-~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~ 283 (416) +++.++ .+ +.+....+++++.. .. +.+.+++..++.+|+.++.+...+ .+........||.+.+||.. T Consensus 220 --v~k~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~e~~e~~~~~lsgl--~~~~~~~~~~iaaa~~IP~t 295 (427) T protein:vir:10 220 --VWKVKGLAEMCDDDDAQYAARLRLAQVDDNSGVGRAIGIDAETEEYDVLNSDISGV--PEFLSSKMDRIVSLSGIHEI 295 (427) T ss_pred --cccchhHHHHhcCccchHHHHHHHHHHHHhcCcccceeeecCCCceeEEecccCCh--HHHHHHHHHHHHhhhCCCee Confidence 333332 11 12222233333332 22 345566666778999988877754 46788888999999999999 Q ss_pred hcccccCCCc-ccHHHHHHHHHHH-------HHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHH----- Q lcl|Aclame:pro 284 KLNELDKATF-SNIEHQSIEYVRN-------TLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQ----- 350 (416) Q Consensus 284 ~lg~~~~~~~-s~~e~~~~~f~~~-------~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~----- 350 (416) +|.+...+.. ++.+...++||.. .|.|.+..+-+.+ .+..+++++| ++|...+.+++ T Consensus 296 ~L~G~sp~Glnstgd~D~~nyyd~i~~~Qe~~l~p~l~~l~~~i--------~~s~~~~~~f--~pL~~~s~kEkaei~~ 365 (427) T protein:vir:10 296 IIKNKNVGGVSASQNTALETFYKLVDRKREEDYRPLLEFLLPFI--------VDEEEWSIEF--EPLSVPSKKEESEITK 365 (427) T ss_pred eeccCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------hcCCCcEEEe--CCCCCCCHHHHHHHHH Confidence 8865544433 4546566666664 3444443332222 1223455555 46666666544 Q ss_pred --HHHHHHHHhCCCcCHHHHHHHh----CCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccC Q lcl|Aclame:pro 351 --AEYLKTLHETGVLNKDEIRELL----ERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKN 414 (416) Q Consensus 351 --~~~~~~~~~~g~~t~NE~R~~~----gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~ 414 (416) ++++.+++++|+++++|+|+.| +.+.+++++..- .+..++... ..++..++.+.+| T Consensus 366 ~~a~a~~~~~~~gvi~~~e~r~~L~~~~~~~~~~~~~~~~-------~e~~~~~~e-~~p~~~e~~~d~~ 427 (427) T protein:vir:10 366 NNVESVTKAITEQIIDLEEARDTLRSIAPEFKLKDGNNIN-------IREPEETTE-PEPGLGEKLEDEN 427 (427) T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHhhhccccCCCCcccc-------ccccchhcC-CCCCCCCCCCCCC Confidence 4677888899999999999977 344444333221 111111111 1112222323333 No 118 >protein:vir:80040 Length: 461 # NCBI annotation: gp3 # Family: family:all:297 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468707;genbank:gi:157325287;genbank:GeneID:5601731 Probab=99.79 E-value=1.1e-19 Score=124.53 Aligned_cols=387 Identities=12% Similarity=0.125 Sum_probs=217.8 Q ss_pred Ccchhhhccccccc-cccccchhHHHhhhcCcc--------ccccccccH----HHHhccHHHHHHHHHHHHhhccCcce Q lcl|Aclame:pro 1 MLLERMFEKRSGSS-DHEDGFNNILLNMFGGRK--------TASGERVSE----SNSLVQPDIFACVNVLSDDIAKLPIH 67 (416) Q Consensus 1 m~~~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~~----~~a~~~~~v~~~i~~ia~~ia~~~~~ 67 (416) |- ++=+.+.... ....+..+.+.....+.. ......++. ..|.+++.++++|+.+|..+-+-++. T Consensus 1 ~~--~~~~a~~~~~~~~a~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~l~~lY~~~~l~r~iVd~~a~d~~r~g~~ 78 (461) T protein:vir:80 1 MY--SIDKAKQAKIDSKIVNRNDFMVGHGKANSRDKLTRQTPGNGQKLDLKACENLYASNSIAMNIVDIISEDMVRAGWS 78 (461) T ss_pred Cc--cchhhhhhhhhhhhhhhhHHHhhcCCcchhhhhhccccCcccccCHHHHHHHHHhCCccchhhccchHHhhcCCee Confidence 33 1111111110 111112222222111110 011111232 34456788899999999999998886 Q ss_pred EEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC-------------CcEEEEEeec Q lcl|Aclame:pro 68 TYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH-------------GYPEALFPLR 134 (416) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~-------------g~~~~l~~l~ 134 (416) +.. +++.. ...+...-+.. ...+-+...+....++|.+++++...+. +.+..+..|+ T Consensus 79 i~~-~~~~~--------~~~~~~~~~~l-~~~~~l~~~~~~~rl~G~a~i~i~v~d~~~~~~~~~~pl~~~~~~~~~~l~ 148 (461) T protein:vir:80 79 LKT-DNKEM--------KKNIESKWRKL-KTKDRFQKLYADKRLYGDGFLSIGVVSSNREQADLSTAIDPKTIKSIPYIN 148 (461) T ss_pred eec-CCHHH--------HHHHHHHHHHh-hHHHHHHHHHHhhcccccEEEEEEeecCCccccCccCCcccccccceeEEE Confidence 643 22111 11121111111 2234455566666789999999853221 1112333222 Q ss_pred ---cceEEEE---Ec----CCCcEEEEEEee-------------CCeeEEechhheeeeccCCC-CccccccHHHHHHHH Q lcl|Aclame:pro 135 ---PDYTNAY---VH----PTTGMLWYQTVL-------------NGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREH 190 (416) Q Consensus 135 ---p~~v~~~---~~----~~~~~~~~~~~~-------------~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~ 190 (416) +..+.+. .+ ..|.+.+|.+.. ....+.+-++.|+|+.+... +.++|.|.++.+.+. T Consensus 149 ~~~~~~i~~~~~~~dp~sp~fg~P~~y~i~~~~~~~~~~~~~~~~~~~~~iH~SRii~~~~~~~~~~~~G~S~le~~~~~ 228 (461) T protein:vir:80 149 TFNTQKVTQLYLNQDMFSEHFGEVEFFEVNRVSQLGEEILSGTTASTSEQIHRSRIIHEQGLRFEGETKGRSIFESLYDI 228 (461) T ss_pred eccccccchhhhcccCcCcccccceEEEEeccccccccccccccCccceEEccccEEEecCCCCCccccCcchHHHHHHH Confidence 2222211 11 235555665543 22346788999999987654 567899999999999 Q ss_pred HHHHHHHHHHHHHHHhccCCcceeeccCC--cCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHH Q lcl|Aclame:pro 191 IGAQAAATKYNAKLYKNEATPRGILKVPA--FLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMK 268 (416) Q Consensus 191 i~~~~~~~~~~~~~~~n~~~~~~v~~~~~--~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~ 268 (416) +............++.+...+ +++.+. .+..+....+.+.+....++.++++++.+.+++.++.+..++ .+..+ T Consensus 229 l~~~~~~~~~~~~l~~~~~~~--v~k~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~e~~e~~~~~lsgl--~~~l~ 304 (461) T protein:vir:80 229 ITVMDTSLWSVGQILYDFAFK--VYKTDDIDALNKDDKANLTAMLDFMFRTEALAIIKGDEQLTKESTNVSGM--KDLLD 304 (461) T ss_pred HHHHHHHHHHHHHHHHHhCCC--ceecchHHhhhchHHHHHHHHHHHhcCCceEEEEcCCcceEEEecCcCCH--HHHHH Confidence 999999998888888776544 444442 334445556666777666777899999999999998887754 47888 Q ss_pred HHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHH-------HHHHHHHHHHHHHHHhhcCchhc--ccccchhhhh Q lcl|Aclame:pro 269 FNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRN-------TLQPWIVNFEQELNVKLFLDHDQ--KSGHYVKFNI 339 (416) Q Consensus 269 ~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~-------~l~P~~~~i~~~l~~~l~~~~~~--~~~~~~~f~~ 339 (416) .....||.+.+||..+|.+...|..++.++..++|+.. -+.|++..+-..+-+..+..... ...+.+.+.+ T Consensus 305 ~~~~~iaa~s~iP~t~L~G~s~g~~asge~D~~~yyd~i~~~qe~~l~p~le~l~~~i~~s~~~~~~~~~p~~~~~~i~f 384 (461) T protein:vir:80 305 YGWDYLAGAVRMPKTVLKGQEAGTLTGAQYDVMNYYARVSSIQENRLRPQLEYLTRLLMWASDDCGPSIDPDSFEWAIEF 384 (461) T ss_pred HHHHHHhhhhcCCeeeeecccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCccccceEEEe Confidence 99999999999999988665556667767777666654 34455555544443322211000 0113466667 Q ss_pred hhhhhccHHHHH-------HHHHHHHhCCCcCHHHHHHHh-C---CCCCCC--CCeEeeccCccccccccccccccCCcc Q lcl|Aclame:pro 340 DSELRGDSKTQA-------EYLKTLHETGVLNKDEIRELL-E---RNPIEN--GDKYISSLNYVFLDFLEEYQRLKAGGA 406 (416) Q Consensus 340 ~~l~~~d~~~~~-------~~~~~~~~~g~~t~NE~R~~~-g---l~p~~g--gd~~~~~~n~~~~~~~~~~~~~~~~~~ 406 (416) ++|...+.++++ +++.+++++|+++++|+|+.+ + ++|..+ |+.. . . ++.... .. T Consensus 385 ~~L~~~s~kekAe~~~~~a~a~~~~~~~g~is~~e~r~~l~~~~~~~~~~~~~~~~~----~---~---~~~~~~---~~ 451 (461) T protein:vir:80 385 NPLWNLDSKTDAEVRKLTAEADQIYIVNGVLDPDEVKETRFGRFGLENSSKFSGDSA----E---I---DKLAKL---VY 451 (461) T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCccCCCCCc----h---h---hhhhhh---cc Confidence 788877777665 458888999999999999865 3 333210 1100 0 0 010000 00 Q ss_pred cCCCCccCCC Q lcl|Aclame:pro 407 MKGGDNKNEG 416 (416) Q Consensus 407 ~~gge~~~~~ 416 (416) ..+.+.+.+| T Consensus 452 ~~~~~e~~~g 461 (461) T protein:vir:80 452 DAYAKKNADG 461 (461) T ss_pred ccccccCCCC Confidence 1112222233 No 119 >protein:vir:99853 Length: 488 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1480 # MgeName: B3 # Cross-refs: genbank:acc:YP_164068;genbank:gi:56692600;genbank:GeneID:3192581 Probab=99.79 E-value=5.7e-19 Score=120.60 Aligned_cols=385 Identities=9% Similarity=-0.026 Sum_probs=234.3 Q ss_pred hccccccccc--cccchhHHHhhhcCcccccccc---------ccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCc Q lcl|Aclame:pro 7 FEKRSGSSDH--EDGFNNILLNMFGGRKTASGER---------VSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG 75 (416) Q Consensus 7 f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---------~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 75 (416) .++....... .....+.+..++++........ ...+..++.+.|.+|++.+...|.+++|.+...+++. T Consensus 1 v~~~~l~~e~at~~~~~d~~~~~~~~l~~~~~~il~~a~~g~~~~y~~l~~D~~i~s~l~~rk~av~~~~w~i~p~~~~~ 80 (488) T protein:vir:99 1 MEKPALGREIATSGDGRDITRPFISGLQVPNDSILQRRGGNDLRVYEEILSDAQVKTVWGQRQLAVVSREWKVEAGGDRP 80 (488) T ss_pred CCccchhHHHHHHHhhhhhhccccCCCCCCChHHHHhhccCCHHHHHHHhhChHHHHHHHHHHHHHhcCCceEEcCCCCh Confidence 2222211111 1111122222222221111100 1123446788999999999999999999997644321 Q ss_pred ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC---CcEEEEEeeccceEEEEEcCCCcEEEEE Q lcl|Aclame:pro 76 IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH---GYPEALFPLRPDYTNAYVHPTTGMLWYQ 152 (416) Q Consensus 76 ~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~---g~~~~l~~l~p~~v~~~~~~~~~~~~~~ 152 (416) .......-+.. ++.+ ..+.+++..++ +.+.+|.++.++++... ..|..+.+.++.++.+ +.+++..+.. T Consensus 81 ~~~~~ae~v~~-~l~~----~~~~~~l~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~--d~~~~l~~~~ 152 (488) T protein:vir:99 81 IDQAAAEHLEQ-QLQR----VGWDRVTSKML-FGVFYGYAVSELIYGRDDRYITLEAIKVRNRRRFRY--DQDGGLRLLT 152 (488) T ss_pred HHHHHHHHHHH-HHhC----CCHHHHHHHHH-hhhhhcceeEEEEEeecCCeeeEeeeeeecccceee--cCCCceEEec Confidence 11111111222 2233 35777888876 46789999999987543 3467899999887664 4455554443 Q ss_pred EeeCCeeEEechhh--eeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC-cCCHHHHHHH Q lcl|Aclame:pro 153 TVLNGKAIELYDYE--VLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA-FLDEKPKENV 229 (416) Q Consensus 153 ~~~~~~~~~~~~~~--vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~-~~~~e~~~~~ 229 (416) .....+...++... ++|.........+|.|.+..|.-..-.-....+....+.+..|.|-.+.+.+. ..++++.+++ T Consensus 153 ~~~~~~g~~lp~~~~~i~~~~~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P~~igky~~~~a~~~ek~~l 232 (488) T protein:vir:99 153 PNNMFEGEPCPAPYFWHFSTGADNDDEPYGLGLAHWLYWPVFFKRNGIKFWLIFLDKFGMPTAVGRYDDKTATPEDKAKL 232 (488) T ss_pred cCCCCCccccccCceEEEEeecCCCCCcccchHHHHHHHHHHHHHhhHHHHHHHHHHcCCceeeeecCCCCCCHHHHHHH Confidence 33333455665433 34443444456799999999999988899999999999999999999999875 5688888888 Q ss_pred HHHHHHhhcCCceeecCCCceeEeccCC-hhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHH Q lcl|Aclame:pro 230 RKEWKRVNKVENIAIIDYGLEYQSISMP-LQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTL 308 (416) Q Consensus 230 ~~~~~~~~~~~~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l 308 (416) .+.+....+. ..+|++.|++++-++.+ .....+.+..++..++|+.+.-= -.+.+...+|+++..+. ........+ T Consensus 233 ~~av~~~~~~-~~~viP~~~~ie~~ea~~~~~~~~~~li~~~d~~Isk~iLG-qtlts~~~~Gs~a~~~v-h~~v~~d~~ 309 (488) T protein:vir:99 233 LAALHAIQTD-SAIIMPAGMQAELLEAGRSGTADYKTLHDTMDATIAKVGLG-QVASTQGTPGRLGNDDL-QADVRLDLV 309 (488) T ss_pred HHHHHHHhcC-cEEEecCCceeEEeecCCCChHHHHHHHHHHHHHHHHHHhh-hhhcccccccchhhHHH-HHHHHHHHH Confidence 8887776654 36777777776655432 22235788888999999887411 12222223345554443 445667778 Q ss_pred HHHHHHHHHHHHHhhcCchhccc---ccchhhhhhhhhhccHHHHHHHHHHHHhC-CC-cCHHHHHHHhCCCCCCCCCeE Q lcl|Aclame:pro 309 QPWIVNFEQELNVKLFLDHDQKS---GHYVKFNIDSELRGDSKTQAEYLKTLHET-GV-LNKDEIRELLERNPIENGDKY 383 (416) Q Consensus 309 ~P~~~~i~~~l~~~l~~~~~~~~---~~~~~f~~~~l~~~d~~~~~~~~~~~~~~-g~-~t~NE~R~~~gl~p~~ggd~~ 383 (416) .-.++.|++.||+.|+.+.-... .-...|.++.....|.+.+++...++++. |+ ++..++|+.+|+|+-..++.. T Consensus 310 ~aDa~~i~~tln~~li~~l~~~N~~~~~~p~~~~~~~e~edl~~~a~~~~~l~~~~G~~i~~~~i~e~~Gip~~~~~~~~ 389 (488) T protein:vir:99 310 KADADLICESFNLGPARWLTEWNFPGAQPPRVYRVIEEPEDITAKAERDEKVFRMSGFRPTRGYVQETYGVEVESTQAEA 389 (488) T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCCcCCceeEecCCCcccHHHHHHHHHHHHhhcCCCCCHHHHHHHcCCCCccccccc Confidence 89999999999988754332211 11123333444667889999999999985 65 889999999999986655544 Q ss_pred eeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 384 ISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 384 ~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ..+.-.. ...++....+.. T Consensus 390 ~~~~~~~--------------~~~~~~~~~~~~ 408 (488) T protein:vir:99 390 TAPTPST--------------EFAEGDQPSDPA 408 (488) T ss_pred ccCCCcc--------------cCCCCCCCCCch Confidence 3321100 000111111111 No 120 >protein:vir:1986 Length: 512 # NCBI annotation: Hypothetical protein # Family: family:all:313 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050633;genbank:gi:9633520;genbank:GeneID:2636304 Probab=99.79 E-value=7.1e-19 Score=120.09 Aligned_cols=395 Identities=13% Similarity=0.041 Sum_probs=234.3 Q ss_pred chhhhc---c---cccccccc----ccchhHHHhhhcCcccc----------------ccccccHHHHhccHHHHHHHHH Q lcl|Aclame:pro 3 LERMFE---K---RSGSSDHE----DGFNNILLNMFGGRKTA----------------SGERVSESNSLVQPDIFACVNV 56 (416) Q Consensus 3 ~~~~f~---~---~~~~~~~~----~~~~~~~~~~~~~~~~~----------------~~~~~~~~~a~~~~~v~~~i~~ 56 (416) ..++.. + ++....+. .+....+....+.+-+. ....+..+...+.+.|.+|+.. T Consensus 1 m~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~iL~~a~~gd~~~~~~L~~dm~~~D~hi~s~l~~ 80 (512) T protein:vir:19 1 MGRILDISGQPFDFDDEMQSRSDELAMVMKRTQEHPSSGVTPNRAAQMLRDAERGDLTAQADLAFDMEEKDTHLFSELSK 80 (512) T ss_pred CcceeCCCCCccccccccccccchhcccchhhccccccCCCHHHHHHHHHHhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 112221 1 01111000 00111111111111110 0001112333467889999999 Q ss_pred HHHhhccCcceEEeecCCcc-eeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEee---cCCCcEEEEEe Q lcl|Aclame:pro 57 LSDDIAKLPIHTYKRTDGGI-ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQF---GSHGYPEALFP 132 (416) Q Consensus 57 ia~~ia~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r---~~~g~~~~l~~ 132 (416) +...|.+++|.|....++.. .+..-.-+...|...| .+.+++..++ +.+.+|-++.++++ +....|..+.+ T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~----~f~~~~~~ll-dA~~~G~s~~Ei~w~~~~g~~~~~~~~~ 155 (512) T protein:vir:19 81 RRLAIQALEWRIAPARDASAQEKKDADMLNEYLHDAA----WFEDALFDAG-DAILKGYSMQEIEWGWLGKMRVPVALHH 155 (512) T ss_pred HHHHHhCCCceEecCCCCCHHHHHHHHHHHHHHhcCC----CHHHHHHHHH-hhhhhcceeeeeEeeeeCCceeeeeeee Confidence 99999999999986543221 1111111223343333 3566666665 46789999999976 33456788999 Q ss_pred eccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCc Q lcl|Aclame:pro 133 LRPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATP 211 (416) Q Consensus 133 l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~ 211 (416) .++.++....+.. ..............+++...+..++.. ....+|.+.+..+.-..-.-....+....+.+..|.| T Consensus 156 r~~~~f~~~~~~~--~~lr~~~~~~~G~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~yG~P 233 (512) T protein:vir:19 156 RDPALFCANPDNL--NELRLRDASYHGLELQPFGWFMHRAKSRTGYVGTNGLVRTLIWPFIFKNYSVRDFAEFLEIYGLP 233 (512) T ss_pred eccccceeccCCC--cEEEecCCCCCceeecCCceEEEeccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHcCCC Confidence 9998876654333 222222333345667777665555544 4567999999999999999999999999999999999 Q ss_pred ceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCC-hhhHHHHHHHHHHHHHHHHHhccchhhcccc-- Q lcl|Aclame:pro 212 RGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMP-LQEAQFVESMKFNKAQISMIYKVPLHKLNEL-- 288 (416) Q Consensus 212 ~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~-~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~-- 288 (416) -.+.+.+...++++.+.+.+.+....+ ...+|++.|++++-++.+ .....+.+..++..++|+.+. ||.+ T Consensus 234 ~~igky~~~a~~~ek~~L~~al~~~~~-~a~~iiP~~~~ie~~ea~~~~~~~y~~li~~~d~~Isk~i------LGqtlT 306 (512) T protein:vir:19 234 MRVGKYPTGSTNREKATLMQAVMDIGR-RAGGIIPMGMTLDFQSAADGQSDPFMAMIGWAEKAISKAI------LGGTLT 306 (512) T ss_pred eeEEecCCCCCHHHHHHHHHHHHHHhh-CcEEEecCCceEEEeecCCCCHHHHHHHHHHHHHHHHHHH------hhhhhc Confidence 999999988888988888888887655 347778888877665532 333457888899999998773 3322 Q ss_pred ----cCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccc-------cchhhhhhhhhhccHHHHHHHHHHH Q lcl|Aclame:pro 289 ----DKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSG-------HYVKFNIDSELRGDSKTQAEYLKTL 357 (416) Q Consensus 289 ----~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~-------~~~~f~~~~l~~~d~~~~~~~~~~~ 357 (416) .+|+++. .+.........+.-.+++|++.||+.|+.+.-.... .+..|.++.....|.+..++...++ T Consensus 307 s~~g~~Gs~a~-~~vh~ev~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~f~~~e~eDl~~~a~~~~~l 385 (512) T protein:vir:19 307 TEAGDKGARSL-GEVHDEVRREIRNADVGQLARSINRDLIYPLLALNSDSTIDINRLPGIVFDTSEAGDITALSDAIPKL 385 (512) T ss_pred ccccccchhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEecCCChhhHHHHHHHHHHH Confidence 2233443 334556677778899999999999988754322111 0122333444567888888888888 Q ss_pred HhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccC--C--C Q lcl|Aclame:pro 358 HETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKN--E--G 416 (416) Q Consensus 358 ~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~--~--~ 416 (416) ..+--++..++|+.+|+|....++....+.-..+- ........ ...+....++ + + T Consensus 386 ~~G~~i~~~~i~e~~Gip~~~~~e~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~d~~~ 444 (512) T protein:vir:19 386 AAGMRIPVSWIQEKLHIPQPVGDEAVFTIQPVVPD---NGSQKEAA-LSAEDIPQEDDIDRMG 444 (512) T ss_pred hcCCCCCHHHHHHHhCCCCCCCccccccCCCcccc---cccccccc-ccccCCCchhhHhHHh Confidence 75555999999999999865555544432211110 00000000 0000000000 0 0 No 121 >protein:vir:107880 Length: 491 # NCBI annotation: gp29 # Family: family:all:313 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024702;genbank:gi:48696939;genbank:GeneID:2845968 Probab=99.77 E-value=1.4e-17 Score=113.01 Aligned_cols=388 Identities=11% Similarity=0.036 Sum_probs=232.8 Q ss_pred Ccchhhhc-----------cccccccccccchhHHHhhhcCccccc----------cccccHHHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFE-----------KRSGSSDHEDGFNNILLNMFGGRKTAS----------GERVSESNSLVQPDIFACVNVLSD 59 (416) Q Consensus 1 m~~~~~f~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~a~~~~~v~~~i~~ia~ 59 (416) |- ..+.. ++....... ......+.++.+.+.. +..-..+...+.+.|.+|++.+.. T Consensus 1 m~-~~i~~~~g~p~~~~~~~~~~~~~ia--~~~~~~~~~~~~~~~~~~~~iLr~~~~~~~~y~~m~~D~~i~s~l~~Rk~ 77 (491) T protein:vir:10 1 MS-KGLWVSPTEFVTFGEPDKSLSSQIA--TRARSIDFFALGMYLPNPDPVLKALGKDIRVYRELRADAHVGGCVRRRKA 77 (491) T ss_pred CC-CceeCCCCCccCcccCChHHHHHHH--hhhcccccccccCCccchHHHHHhcCCCHHHHHHHhhChHHHHHHHHHHH Confidence 10 00000 000000000 0000011111111100 000112334578899999999999 Q ss_pred hhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC-C--cEEEEEeeccc Q lcl|Aclame:pro 60 DIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH-G--YPEALFPLRPD 136 (416) Q Consensus 60 ~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~-g--~~~~l~~l~p~ 136 (416) .|.+++|.|...+++.+. ......++.++ .+.+++..++ +.+.+|.++.++++... | .|..+.++++. T Consensus 78 av~~~~w~i~~~~~~~~~----~e~v~e~l~~~----~~~~~l~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~ 148 (491) T protein:vir:10 78 AVKALEWGLDRGKAKSRV----AKSIADVFADL----DLSRIVTEML-DAVLYGYQPMEITWGKVGNYIVPIDVVGKPAD 148 (491) T ss_pred HHhCCCcEEecCCCCHHH----HHHHHHHHhcC----CHHHHHHHHH-HhhhhcceeEEEEEeecCCeeEEEEeeeeccc Confidence 999999999865544221 12233333443 4677887776 57889999999987544 3 46789999998 Q ss_pred eEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceee Q lcl|Aclame:pro 137 YTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGIL 215 (416) Q Consensus 137 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~ 215 (416) ++.+ +.+++..+...........+++...++.++... ...+|.|.+..+.-..-.-....+....+.+..|.|-.+. T Consensus 149 ~f~~--d~~~~l~~~~~~~~~~g~~l~~~k~i~~~~~~~~~~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P~~ig 226 (491) T protein:vir:10 149 WFVY--DPENQLRFRSKDHWMQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSPMLVG 226 (491) T ss_pred ceee--ccCCceEEecCCCCCCcceecCCCEEEEEecCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE Confidence 7764 445555544333334567788888877776644 4579999999999999999999999999999999999999 Q ss_pred ccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCC--h-hhHHHHHHHHHHHHHHHHHhccchhhcccccCCC Q lcl|Aclame:pro 216 KVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMP--L-QEAQFVESMKFNKAQISMIYKVPLHKLNELDKAT 292 (416) Q Consensus 216 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~--~-~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~ 292 (416) +.+...++++.+++.+.+....+. ..+|++.|++++-+..+ . ....+.+..++..++|+.+.-=- . +....+|+ T Consensus 227 ky~~~a~~~ek~~l~~al~~~~~~-a~~viP~~~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~iLGq-t-lTt~~~gs 303 (491) T protein:vir:10 227 KHPRSASDGEKNLLLDCLEDMVQD-AVAVVPDDSSIEIKEAAGKTGSADVYERLLHFCRGEVSIALLGQ-N-QTTEATST 303 (491) T ss_pred ecCCCCCHHHHHHHHHHHHHHhcC-cEEEecCCceeEEEecCCCCCChhHHHHHHHHHHHHHHHHHhhh-h-cccCcccc Confidence 999888999999888888876553 46778888777665432 2 22347777788888887763210 1 11113345 Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCch---hcccccchhhhhhhhhhccHHHHHHHHHHHHhCCC-cCHHHH Q lcl|Aclame:pro 293 FSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDH---DQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGV-LNKDEI 368 (416) Q Consensus 293 ~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~---~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~-~t~NE~ 368 (416) ++..+. ...-....+.-.++.|++.||+ |+.+. ......+.+|.+.... .+.+.+++..+++++.|+ ++..++ T Consensus 304 ~a~~~v-h~~v~~di~~~D~~~i~~tln~-li~~l~~~N~~~~~~p~f~~~~~~-e~~~~~a~~~~~L~~~G~~i~~~~i 380 (491) T protein:vir:10 304 RASAQA-GLEVTDDIRDGDKAVVSEAMNM-LIRWICDLNFDGADRPVFDMWEQE-QVDEIQAGRDQKLTQAGARFTPAYF 380 (491) T ss_pred hhHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcceEEecCcC-chhHHHHHHHHHHHhCCCcCCHHHH Confidence 554443 3345566677888999999986 54321 1112223445554432 334678899999999988 999999 Q ss_pred HHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 369 RELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 369 R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) |+.+|+|+-+.+........-.+ ...+......+.+++.- T Consensus 381 ~e~~Gip~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 420 (491) T protein:vir:10 381 KRAYNLQDGDLDERPLPVSAVDT--------VGAASFAEFEAPDQDAL 420 (491) T ss_pred HHHhCCCCCCcCccccccCCCCC--------cccccccccCCCCCCch Confidence 99999997655544321110000 00000000001111111 No 122 >protein:vir:79063 Length: 491 # NCBI annotation: gp3 # Family: family:all:313 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111203;genbank:gi:134288841;genbank:GeneID:4960737 Probab=99.77 E-value=1.3e-17 Score=113.25 Aligned_cols=389 Identities=10% Similarity=0.017 Sum_probs=233.3 Q ss_pred Ccchhhhcccccccc---ccccchhHHHhhhcCccccc---------cccccHHHHhccHHHHHHHHHHHHhhccCcceE Q lcl|Aclame:pro 1 MLLERMFEKRSGSSD---HEDGFNNILLNMFGGRKTAS---------GERVSESNSLVQPDIFACVNVLSDDIAKLPIHT 68 (416) Q Consensus 1 m~~~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 68 (416) +=--+.++.....+. ........+....++..+.. +..-..+...+.+.|.+|++.+...|.+++|.| T Consensus 7 ~~~g~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~p~~~~il~~~~~~~~~y~~m~~D~~i~s~l~~Rk~av~~~~w~i 86 (491) T protein:vir:79 7 VSPTEFVKFGEPDKSLSSQIATRARSIDFFALGMYLPNPDPVLKALGKDIRVYRELRADAHVGGCVRRRKAAVKALEWGL 86 (491) T ss_pred CCCCCcccccccchhHHHHHhhhccccccccccccCcchhHHHhhccCCHHHHHHHhhChHHHHHHHHHHHHHhCCCcEE Confidence 111111111000000 00000000000000000000 000112344578999999999999999999999 Q ss_pred EeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC---CcEEEEEeeccceEEEEEcCC Q lcl|Aclame:pro 69 YKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH---GYPEALFPLRPDYTNAYVHPT 145 (416) Q Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~---g~~~~l~~l~p~~v~~~~~~~ 145 (416) ...+++.+ .. .....++.++ .+.+++..++ +.+.+|-++.++++... ..|..+.+.++.++.+ +.+ T Consensus 87 ~~~~~~~~---~a-~~i~e~l~~~----~~~~~i~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~--d~~ 155 (491) T protein:vir:79 87 DRGKAKSR---VA-KSIADVFADL----DLSRIATEML-DAVLYGYQPMEITWGKVGNYIVPIDVVGKPADWFVY--DPE 155 (491) T ss_pred ecCCCCHH---HH-HHHHHHHhcC----CHHHHHHHHH-HhhhhcceeEEEEEeecCCeeeEEeeeeecccceee--ccC Confidence 87654422 11 2223333443 4666776664 56789999999976543 3467899999987764 445 Q ss_pred CcEEEEEEeeCCeeEEechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHH Q lcl|Aclame:pro 146 TGMLWYQTVLNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEK 224 (416) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e 224 (416) ++..+...........+++...++.++... ...+|.|.+..+.-..-.-....+....+.+..|.|-.+.+.+...+++ T Consensus 156 ~~l~l~~~~~~~~g~~lp~~k~i~~~~~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~~G~P~~igky~~~a~~~ 235 (491) T protein:vir:79 156 NQLRFRSKEHWVQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSPMLVGKHPRSASDA 235 (491) T ss_pred CceEEeecCCCCCceeecCCCeEEEEecCCCCCcccchhHHHHHHHHHHHHhhHHHHHHHHHHcCCCeEEEecCCCCCHH Confidence 555554444444567888888888877654 4579999999999999999999999999999999999999999888998 Q ss_pred HHHHHHHHHHHhhcCCceeecCCCceeEeccCC---hhhHHHHHHHHHHHHHHHHHhccchhhcccc----cCCCcccHH Q lcl|Aclame:pro 225 PKENVRKEWKRVNKVENIAIIDYGLEYQSISMP---LQEAQFVESMKFNKAQISMIYKVPLHKLNEL----DKATFSNIE 297 (416) Q Consensus 225 ~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~---~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~----~~~~~s~~e 297 (416) +.+.+.+.+....+. ..+|++.|++++-+..+ .....+.+..++..++|+.+. ||.+ .+|+++..+ T Consensus 236 ek~~l~~al~~~~~~-a~~viP~~~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~i------LGqtlTt~~~gs~a~~~ 308 (491) T protein:vir:79 236 ETNLLLDRLEDMVQD-AVAVIPDDSSIEIKEAAGKSGSADVYERLLHFCRGEVSIAL------LGQNQTTEATSTRASAQ 308 (491) T ss_pred HHHHHHHHHHHHhcC-eEEEecCCceeEEEeccCCCCChhHHHHHHHHHHHHHHHHH------hhhhhccCcccchhhHH Confidence 888888888776543 46777878776655432 223347777888888888765 3322 334555544 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhc---ccccchhhhhhhhhhccHHHHHHHHHHHHhCCC-cCHHHHHHHhC Q lcl|Aclame:pro 298 HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQ---KSGHYVKFNIDSELRGDSKTQAEYLKTLHETGV-LNKDEIRELLE 373 (416) Q Consensus 298 ~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~---~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~-~t~NE~R~~~g 373 (416) . ...-....+.-.++.|++.||+ ++.+.-. .....++|.+.... .+.+.+++..+++++.|+ ++..++|+.+| T Consensus 309 v-h~~v~~~i~~~D~~~i~~tln~-li~~l~~~N~~~~~~p~f~~~e~e-e~~~~~a~~~~~L~~~G~~i~~~~~~e~~G 385 (491) T protein:vir:79 309 A-GLEVTDDIRDGDKAIVVEAMNM-LIRWICDLNFDGAARPVFDMWEQE-QVDEIQAGRDEKLTRAGARFTPAYFKRAYN 385 (491) T ss_pred H-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcceEeecCcC-chhHHHHHHHHHHHhCCCccCHHHHHHHhC Confidence 4 3345566677889999999986 4432211 11223455554432 223567889999999988 99999999999 Q ss_pred CCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 374 RNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 374 l~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +|+.+.+.....+..-.+. ...........++...+. T Consensus 386 ip~~~~~e~~~~~~~~~~~------~~~~~~~~~~~~~~~~d~ 422 (491) T protein:vir:79 386 LQDGDLDERPLPVSAVDAV------GAASFAEFEAPDQDALDA 422 (491) T ss_pred CCCCCCCccccCcCccccc------ccccccccCCCCCcchHH Confidence 9976666554322110000 000000000000101111 No 123 >protein:vir:79538 Length: 502 # NCBI annotation: putative portal protein # Family: family:all:47 # MgeID: mge:1871 # MgeName: cdtI # Cross-refs: genbank:acc:YP_001272517;genbank:gi:148609386;genbank:GeneID:5204374 Probab=99.75 E-value=5.7e-19 Score=120.62 Aligned_cols=415 Identities=13% Similarity=0.030 Sum_probs=232.1 Q ss_pred Ccchh----hhcc---------ccccccccccchhHHHhhhcCcccc---------ccccccHHHHhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLER----MFEK---------RSGSSDHEDGFNNILLNMFGGRKTA---------SGERVSESNSLVQPDIFACVNVLS 58 (416) Q Consensus 1 m~~~~----~f~~---------~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~v~~~i~~ia 58 (416) |-|-. +|.. |.....+...........+....+. ....-+++-+..++.+.++|+.+. T Consensus 1 mn~~dr~i~~~sP~~~~~R~~ar~~~~~y~aa~~~r~~~~~~~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~ 80 (502) T protein:vir:79 1 MAILDDVIGVFSPGWKAARLRSRAVIQAYEAVKTTRTHKARRENRTADQLSQYGAVSLREQARYLDNNHDLVIGVFDKLE 80 (502) T ss_pred CchHhhHHhhcChHHHHHHHhhHHHHhhccccCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH Confidence 32211 1110 0000000000000000000000000 001112445557899999999888 Q ss_pred HhhccC-cceEEee--cCCc-ceeeecc---chhhhhccc--cccccCHHHHHHHHHHHHHHcCCeEEEEeecC------ Q lcl|Aclame:pro 59 DDIAKL-PIHTYKR--TDGG-IERKPEH---KSAHAVYAR--PNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS------ 123 (416) Q Consensus 59 ~~ia~~-~~~~~~~--~~~~-~~~~~~~---~~~~~l~~~--PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~------ 123 (416) +.+-.. -+.+... ..+. ..++... .++..+... ..-.++.+++...++..++..|++|+.+.+.. T Consensus 81 ~nvVG~ggi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~~~~~~ 160 (502) T protein:vir:79 81 ERVVGKNGIIVEPHPVLRNGAIARDLAAEIRTRWSEWSVSPEVTGQFTRPMLERLMLRTWLRDGEVFAQMVSGRINSLTP 160 (502) T ss_pred HhhccCCceeeeeccCCCChhHHHHHHHHHHHHHHHhhcCcCccccCCHHHHHHHHHHHHHhCCceEEEEeecccCccCC Confidence 888765 3333211 1111 0010110 122223232 22347899999999999999999999986543 Q ss_pred -CCcEEEEEeeccceEE------------EEEcCCCcEEEEEEee-------CCeeEEechhheeeeccCC-CCcccccc Q lcl|Aclame:pro 124 -HGYPEALFPLRPDYTN------------AYVHPTTGMLWYQTVL-------NGKAIELYDYEVLHFKGLS-TDGIHGKS 182 (416) Q Consensus 124 -~g~~~~l~~l~p~~v~------------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~vih~~~~~-~~~~~G~s 182 (416) .+.+..|..|+|+.+. |..+..|.++.|.+.. ..+.+.+|+++|+|+..+- +.-.+|+| T Consensus 161 g~~~~l~lq~iepd~l~~~~~~~~~i~~GVe~d~~Gr~~aY~i~~~hPgd~~~~~~~rvpA~~vlH~f~~~r~gQ~RGis 240 (502) T protein:vir:79 161 SAGVHFWLEALEPDFIPMTSDESNRLNQGVFVDDWGRPEKYLVYKSRPVSGRQMETKEVDAERMLHLKFVRRLHQMRGTS 240 (502) T ss_pred CcccceEEEEecchhcCCCCCCCCeeEeeeEECCCCceEEEEEeecCCCCCcccceeEechhheEEeecccCCccccCCc Confidence 3356789999998875 4456667776666542 2345689999999998764 45689999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHH--HHHHHHHHHHHhhcCCcee-ecCCCceeEeccCChh Q lcl|Aclame:pro 183 PIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEK--PKENVRKEWKRVNKVENIA-IIDYGLEYQSISMPLQ 259 (416) Q Consensus 183 ~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e--~~~~~~~~~~~~~~~~~~~-vl~~g~~~~~~~~~~~ 259 (416) .+..+...+.......+......+-.+...++++.+..-... ....-...-......|.++ .|..|.+++..+.+.. T Consensus 241 ~lapvl~~l~~l~~~~dael~~a~i~A~~~~fi~~~~~~~~~~~~~~~~~~~~~~~l~pG~i~~~L~pGe~i~~~~p~~p 320 (502) T protein:vir:79 241 LLSGVLIRLSALKEYEDSELTAARIAAALGMYIRKGDGQSYEPDGNGSKENERELTIQPGIIYDDLKPGEEIGMVKSDRP 320 (502) T ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCcccccccCCCCCccccccccCCccccccCCCceeeeeCCCCC Confidence 999999888888777777776676777777777754321110 0000000000112345544 5899999998887666 Q ss_pred hHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHH-----------HHHHHHHHHHH-HHHHHHHhhcCch Q lcl|Aclame:pro 260 EAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEY-----------VRNTLQPWIVN-FEQELNVKLFLDH 327 (416) Q Consensus 260 d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f-----------~~~~l~P~~~~-i~~~l~~~l~~~~ 327 (416) ...+.+..+...+.||..+|||.+.|....++|||+.-.....| ...-++|+.+. ++.++-.-.++.. T Consensus 321 ~~~~~~f~~~~lr~iaaglGi~ye~lt~D~s~nySs~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~~l~~a~l~G~i~~p 400 (502) T protein:vir:79 321 NPNLETFRNGQLRAVAAGSRLSFSSTARNYNGTYSAQRQELVESTDGYLILQDWFIGAVTRPMYRAWLKQAVASGVIRLP 400 (502) T ss_pred CCCHHHHHHHHHHHHHhhcCCCHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC Confidence 67888999999999999999999988766666887765544333 33344443333 2333322222211 Q ss_pred hc---ccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC----------CCeEeeccCcccccc Q lcl|Aclame:pro 328 DQ---KSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN----------GDKYISSLNYVFLDF 394 (416) Q Consensus 328 ~~---~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g----------gd~~~~~~n~~~~~~ 394 (416) .. .....+.|-.-.....|+...+++...++++|+.|.-|+-.+.|.+|.+- .+++-++....|... T Consensus 401 ~~~~~~~~~~~~W~~p~~~~iDP~Ke~~a~~~~i~~Gl~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~~~~ 480 (502) T protein:vir:79 401 RDLDRSSLYTAVYSGPVMPWIDPVKEAEAWKIQIRGGAATESDWVRAGGRNPDDVKRRRKAEIDENRKLDLVFDTDPASD 480 (502) T ss_pred CCCCchhhcceeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCCC Confidence 10 00112222233345568999999999999999999999999999998532 123333333322221 Q ss_pred cccc-ccccCCcccCCCCccCC Q lcl|Aclame:pro 395 LEEY-QRLKAGGAMKGGDNKNE 415 (416) Q Consensus 395 ~~~~-~~~~~~~~~~gge~~~~ 415 (416) .... ....+.+...++++.+| T Consensus 481 ~~~~~~~~~~~e~~~~~~~~e~ 502 (502) T protein:vir:79 481 KGGSSAATKRQEPQHTDDQSEE 502 (502) T ss_pred CCCCCCCCCCCCCCCCCCCCCC Confidence 1111 11111222333334444 No 124 >protein:vir:389 Length: 530 # NCBI annotation: gp4 # Family: family:all:47 # MgeID: mge:325 # MgeName: N15 # Cross-refs: genbank:acc:NP_046899;genbank:gi:9630468;genbank:GeneID:1261643 Probab=99.71 E-value=9.2e-18 Score=113.98 Aligned_cols=413 Identities=10% Similarity=-0.001 Sum_probs=231.1 Q ss_pred Ccchhhhcccccccc-----cc---ccchhHHHhhhcCcccc---------ccccccHHHHhccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSD-----HE---DGFNNILLNMFGGRKTA---------SGERVSESNSLVQPDIFACVNVLSDDIAK 63 (416) Q Consensus 1 m~~~~~f~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~ 63 (416) |-.-.+......... +. ......+.+......+. ....-+++-+..++.+.+||+.+.+.+-. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~w~~~~~s~~~~i~~~~~~lr~RaRdl~rNn~~a~~av~~~~~nvVG 80 (530) T protein:vir:38 1 MKIPSLVGPDGKTSLREYAGYHGGGGGFGGQLRGWNPPSESADAALLPNYSRGNARADDLVRNNGYAANAVQLHQDHIVG 80 (530) T ss_pred CccceeecCccccchHHHhhhhcccCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhhC Confidence 443333331110000 00 00000000000000000 00112344555689999999999999988 Q ss_pred CcceEEeecC------Ccc-eeeec---cchhhhhccccc------cccCHHHHHHHHHHHHHHcCCeEEEEeecCC-C- Q lcl|Aclame:pro 64 LPIHTYKRTD------GGI-ERKPE---HKSAHAVYARPN------PYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH-G- 125 (416) Q Consensus 64 ~~~~~~~~~~------~~~-~~~~~---~~~~~~l~~~PN------~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~-g- 125 (416) ..+++.-.-+ ++. .+... ..++..+...|+ -.+|..++...++..++..|++|+.+.+... | T Consensus 81 ~Gi~~~~~p~~~~l~~~~~~~~~~~~~ie~~w~~W~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~~~~~~~~g~ 160 (530) T protein:vir:38 81 SFFRLSYRPSWRYLGINEEDSRAFSRDVEAAWNEYAEDDFCGIDAERKRTFTMMIREGVAMHAFNGELCVQATWDSDSTR 160 (530) T ss_pred CCceeeeccchhhcCCCHhHHHHHHHHHHHHHHHhhcCCCcEEeeeccCCHHHHHHHHHHHHhhCCceEEEeeeccCCCC Confidence 8887664321 000 00000 123444445554 3468999999999999999999999976543 3 Q ss_pred -cEEEEEeeccceEEE--------------EEcCCCcEEEEEEeeC---C----------eeEEechhheeeeccCC-CC Q lcl|Aclame:pro 126 -YPEALFPLRPDYTNA--------------YVHPTTGMLWYQTVLN---G----------KAIELYDYEVLHFKGLS-TD 176 (416) Q Consensus 126 -~~~~l~~l~p~~v~~--------------~~~~~~~~~~~~~~~~---~----------~~~~~~~~~vih~~~~~-~~ 176 (416) .+..|..|+|+.+.. ..+..|....|.+... + ....++..+|+|+..+- +. T Consensus 161 ~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~vlH~f~~~r~g 240 (530) T protein:vir:38 161 LFRTQFKMVSPKRVSNPNNIGDTRNCRAGVKINDSGAALGYYVSDDGYPGWMAQNWTYIPRELPGGRPSFIHVFEPMEDG 240 (530) T ss_pred ccceEEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEEeeccCCCccccccceeeeeeccChhHeEeeccccCCC Confidence 356788888877653 3344555555554321 1 12346677999998664 45 Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-----------CHHHHHHHHHH------HHH---- Q lcl|Aclame:pro 177 GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-----------DEKPKENVRKE------WKR---- 235 (416) Q Consensus 177 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-----------~~e~~~~~~~~------~~~---- 235 (416) -.+|+|.+..+...+.......+....-.+-.+...++++.+... ..++...+... +.+ T Consensus 241 Q~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (530) T protein:vir:38 241 QTRGANAFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGADNKEQQSKLTGWLGEMAAYYSAAPV 320 (530) T ss_pred cccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeeccCCccccccccccCCcccccccccccchhhhhcccccce Confidence 689999999998888887777777766666666677777653321 01111111111 100 Q ss_pred hhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcc-cccCCCcccHHHHHHH-----------H Q lcl|Aclame:pro 236 VNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLN-ELDKATFSNIEHQSIE-----------Y 303 (416) Q Consensus 236 ~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg-~~~~~~~s~~e~~~~~-----------f 303 (416) ....|.+..|..|.+++.++.+-.-..+.+..+...+.||..+|||.+.|. ...+.|||+.-..... | T Consensus 321 ~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~f~~~~lr~iaaglGi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~~ 400 (530) T protein:vir:38 321 RLGGARVPHLLPGDSLNLQSAQDTDNGYSTFEQSLLRYIAAGLGVSYEQLSRNYSQMSYSTARASANESWAYFMGRRKFV 400 (530) T ss_pred eccCceeeecCCCCeeeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHH Confidence 124567888999999998887766678889999999999999999999884 4556688865544333 3 Q ss_pred HHHHHHHHHHH-HHHHHHHhhcCchhccc-c--------cchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhC Q lcl|Aclame:pro 304 VRNTLQPWIVN-FEQELNVKLFLDHDQKS-G--------HYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLE 373 (416) Q Consensus 304 ~~~~l~P~~~~-i~~~l~~~l~~~~~~~~-~--------~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~g 373 (416) ...-+.|+... +++++..-.++...... + ..+.+-.-.....|+...+++...++++|+.|.-|+-.+.| T Consensus 401 ~~~~~~pi~~~wl~~av~~G~i~~p~~~~~~~~~~~~a~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~s~~~~~a~~G 480 (530) T protein:vir:38 401 ASRQACQMFLCWLEEAIVRRVVTLPSKARFSFQEARTAWGNANWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECAKRG 480 (530) T ss_pred HHHHhhHHHHHHHHHHHHcCCccCCCCCCCCchhhHHhhhceeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcC Confidence 33334444333 33333333332111000 0 01122222334458999999999999999999999999999 Q ss_pred CCCCCCCCe------EeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 374 RNPIENGDK------YISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 374 l~p~~ggd~------~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) .++.+--++ .+--.++.+ ........+.+.....++.++| T Consensus 481 ~D~~~v~~q~a~e~~~~~~~Gl~~---~~~~~~~~~~~~~~~~~~~~d~ 526 (530) T protein:vir:38 481 DDYQEIFAQQVRESMERRAAGLNP---PAWAAAAFEAGVKKSNEEEQDG 526 (530) T ss_pred CCHHHHHHHHHHHHHHHHHcCCCC---CCCcccccCCCCCCCCCCCCCC Confidence 988532111 111111111 1111111111112222222222 No 125 >protein:vir:96738 Length: 505 # NCBI annotation: putative phage-related protein # Family: family:all:47 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039817;genbank:gi:126010916;genbank:GeneID:5076248 Probab=99.71 E-value=3.6e-18 Score=116.23 Aligned_cols=412 Identities=12% Similarity=0.056 Sum_probs=233.3 Q ss_pred Ccchhhhc--------c-ccccccccccchhHHHhhhcCcccc------------ccccccHHHHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFE--------K-RSGSSDHEDGFNNILLNMFGGRKTA------------SGERVSESNSLVQPDIFACVNVLSD 59 (416) Q Consensus 1 m~~~~~f~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~a~~~~~v~~~i~~ia~ 59 (416) =+++|... + +.....+...........+...++. ....-+++-+..++.+.++|+.+.+ T Consensus 9 ~~~dr~i~~~~~~~~~~~~~~~~~y~aa~~~r~~~~w~~~~~~~s~~~~i~~~~~~lr~RaRdL~rNn~~a~~av~~~~~ 88 (505) T protein:vir:96 9 SLAQRMVNWAWYRYVEPQKNAARAFEAARRDRLGKAWLRRASRLSADEEIYADLASLVQRAREQSINNPYAKRFYQLLKN 88 (505) T ss_pred chhhcccchhhhhhHHHHHHhhhhcccccCCCccccccCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHH Confidence 01111111 0 0000000000000000000000000 0111234555578999999998888 Q ss_pred hhcc-CcceEEeecCC---cceeeec---cchhhhhcccccc----ccCHHHHHHHHHHHHHHcCCeEEEEeecCC-CcE Q lcl|Aclame:pro 60 DIAK-LPIHTYKRTDG---GIERKPE---HKSAHAVYARPNP----YMTAFTWKKLMMTHVLTWGNAYSYIQFGSH-GYP 127 (416) Q Consensus 60 ~ia~-~~~~~~~~~~~---~~~~~~~---~~~~~~l~~~PN~----~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~-g~~ 127 (416) .+-. ..++....-.. +..+... ..++..+...+|. .++..++...++..++..|++|+.+.+... ..+ T Consensus 89 nvVG~~Gi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~~~~~~~~~ 168 (505) T protein:vir:96 89 NVIGPKGMTFQSRVKRRNGKPDDRANTLIEGNWQQWIKKGNCDVTGRYHFVTLLHLWMETLARDGEVLVREHRGYPNKWG 168 (505) T ss_pred HhcCCCcceeeecCCcccccccHHHHHHHHHHHHHhcCCcCcceeccCCHHHHHHHHHHHHhhCCceEEEEeecCCCCcc Confidence 8775 56665533211 1011111 1234445555553 367899999999999999999999865433 346 Q ss_pred EEEEeeccceEEE----------------EEcCCCcEEEEEEeeC-------------CeeEEechhheeeeccCC-CCc Q lcl|Aclame:pro 128 EALFPLRPDYTNA----------------YVHPTTGMLWYQTVLN-------------GKAIELYDYEVLHFKGLS-TDG 177 (416) Q Consensus 128 ~~l~~l~p~~v~~----------------~~~~~~~~~~~~~~~~-------------~~~~~~~~~~vih~~~~~-~~~ 177 (416) ..|..|+|+.+.. ..+..|....|.+... ...+.+|+.+|+|+..+. +.- T Consensus 169 ~~lqliepd~l~~~~n~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~hPgd~~~~~~~~~~~~~rvpa~~vlH~f~~~r~gQ 248 (505) T protein:vir:96 169 YALQILECDRLDLNYNADLQNGNRIRMSIELDAWERPVAYHLLVNHPGDNSYCYHYAGQTYERVPADEIIHTFVPWRPHQ 248 (505) T ss_pred eEEEEechhhcCCCCCcccCCcCeEEeceEECCCCceEEEEEeecCCCccccccccccccccccCHhHhhhhhcccCCcc Confidence 7788888877742 3344455555655321 124568999999998654 456 Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-CHHHHHHHHHHHHHhhcCCceeecCCCceeEeccC Q lcl|Aclame:pro 178 IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-DEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISM 256 (416) Q Consensus 178 ~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~ 256 (416) .+|+|.+..+...+.......+......+-.+...++++.+... .+...+.- .........|.+..|..|.+++.++. T Consensus 249 ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~-~~~~~~l~pG~i~~L~pGe~i~~~~~ 327 (505) T protein:vir:96 249 NRGIPWTHASMVELHHIGEYRKSEMIAAELGAKKVGFYEQDPEAYDQPPEDDQ-GEIVEEVEAGTYQLLPYGIRFKEHKI 327 (505) T ss_pred ccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCccCCCcccccc-CccccccCCceeeecCCCCeeeeeCC Confidence 89999999998888887777777776667777777777764321 11110000 00011234677888999999999888 Q ss_pred ChhhHHHHHHHHHHHHHHHHHhccchhhcc-cccCCCcccHHHHHH-----------HHHHHHHHHHHHH-HHHHHHHhh Q lcl|Aclame:pro 257 PLQEAQFVESMKFNKAQISMIYKVPLHKLN-ELDKATFSNIEHQSI-----------EYVRNTLQPWIVN-FEQELNVKL 323 (416) Q Consensus 257 ~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg-~~~~~~~s~~e~~~~-----------~f~~~~l~P~~~~-i~~~l~~~l 323 (416) +.....+.+..+...+.||..+|||.+.|. ...+.|||..-+... .|...-++|+.+. ++.++-.-. T Consensus 328 ~~p~~~~~~f~~~~lr~iaaglgi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~~l~~a~l~G~ 407 (505) T protein:vir:96 328 DHPHTNFGAFVKSSLRGVAAGMGPAYNRLAHDLEGVNFSSLRSGELDERDLYKLLQFFVVTELLERVAGNLISMSLLTQA 407 (505) T ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC Confidence 766788899999999999999999998875 445567776544333 3444556665543 344433333 Q ss_pred cCchhcccc--cchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCe------EeeccCccccccc Q lcl|Aclame:pro 324 FLDHDQKSG--HYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDK------YISSLNYVFLDFL 395 (416) Q Consensus 324 ~~~~~~~~~--~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~------~~~~~n~~~~~~~ 395 (416) ++....... ..+.+-.-.....|+...+++...++++|+.|.-|+-.+.|.++.+--++ .+.-++..+.... T Consensus 408 i~~p~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~ 487 (505) T protein:vir:96 408 LPLNMVDIDRLSQYAFQPRGWDWVDPAKDSKAHSESIKNRTRSRSSIIRAAGDDPEDVFDEIAWEEQLMRDKGVNPTPPE 487 (505) T ss_pred cCCCCccchhhceeeeccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCCCCCC Confidence 332221111 12333333455679999999999999999999999999999988532111 1112222211111 Q ss_pred cccccccCCcccCCCCccC Q lcl|Aclame:pro 396 EEYQRLKAGGAMKGGDNKN 414 (416) Q Consensus 396 ~~~~~~~~~~~~~gge~~~ 414 (416) ....+. ..+..+.+.+|| T Consensus 488 ~~~~~~-~~~~~~~~~~d~ 505 (505) T protein:vir:96 488 QESKDA-TTDEEDDSASDD 505 (505) T ss_pred CCCCCC-CCCCCCCCCCCC Confidence 111111 111112222233 No 126 >protein:vir:95254 Length: 488 # NCBI annotation: Phage conserved protein # Family: family:all:2372 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944885;genbank:gi:158267601;genbank:GeneID:2744039 Probab=99.66 E-value=1.4e-15 Score=101.96 Aligned_cols=403 Identities=12% Similarity=0.047 Sum_probs=211.8 Q ss_pred ccccccccccchhH-HHhhhcCc----ccc------------ccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeec Q lcl|Aclame:pro 10 RSGSSDHEDGFNNI-LLNMFGGR----KTA------------SGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRT 72 (416) Q Consensus 10 ~~~~~~~~~~~~~~-~~~~~~~~----~~~------------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 72 (416) -.++....++..+. +...+... ... ....+ .+...+.+.|.+|+..+...|.+++|+|...+ T Consensus 1 ~~~~~~~~~gl~p~rl~~i~~~~~~~~~~~~~~~~~~~Lr~~~~~~l-y~~m~~D~hi~s~l~~Rk~av~~~~w~v~p~~ 79 (488) T protein:vir:95 1 MADITETQESLPPFRMGEVGSLGLKVKNGRIYEEPRQALRFPESIKT-FQLMMRDPAVAASVNIIKMFVRKVNWRFVPPK 79 (488) T ss_pred CCCccccCCCCCHHHHHHHHHHhhccccchhhccchhhhcccchHHH-HHHHhhChHHHHHHHHHHHHHhcCCceEecCC Confidence 11222222222221 11111100 000 00112 23344688899999999999999999997643 Q ss_pred CCcceeeeccchhhhhccc-cccccCHHHHHHHHHHHHHHcCCeEEEEeecC-------------CC--cEEEEEeeccc Q lcl|Aclame:pro 73 DGGIERKPEHKSAHAVYAR-PNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS-------------HG--YPEALFPLRPD 136 (416) Q Consensus 73 ~~~~~~~~~~~~~~~l~~~-PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~-------------~g--~~~~l~~l~p~ 136 (416) +..... .+-.....+... -+-..++.+++..++ +.+.+|-++.++++.. +| .+..+.+.++. T Consensus 80 ~~~~d~-~~~~~a~~v~~~l~~~~~~~~~~i~~~l-da~~~G~s~~Eivw~~~~~~~~~~~~~~~dg~~~~~~i~~Rpq~ 157 (488) T protein:vir:95 80 GKEQDP-KMLERADFFNSLMDDMEHDWADFINSVM-SFCTYGFCVNEKVYKKRQGKKGKYQSKFDDGLIGWAKLPIRNQS 157 (488) T ss_pred CCchhH-HHHHHHHHHHHHHhccCccHHHHHHHHH-HhhcccceeeeeeeeccccccccccccccCCeeeeeeeeecCcc Confidence 321100 000011112111 112235677777775 5788999999998743 22 24556666653 Q ss_pred eE-EEEEcCCCcEEEEEEe---------------eCCeeEEechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 137 YT-NAYVHPTTGMLWYQTV---------------LNGKAIELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATK 199 (416) Q Consensus 137 ~v-~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~ 199 (416) +. .+..+.+++....... .....+.+|....++.++.. ....+|.+.+..|.-..-.-....+ T Consensus 158 ~~~~f~~d~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~kfi~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~ 237 (488) T protein:vir:95 158 TLDKWYFDEDFRRVTGVRQNLRNVSHIAGAINLGERPLTRKLPRAKFMLFKYDDEYGNPEGRSPLLNAYVPWKYKVQIEE 237 (488) T ss_pred cccceeeccCCCceeecccccccccccccccccccccccccccccceEEEeecCCCCccchhhHHHHHHHHHHHHHHHHH Confidence 22 2334444443322111 11234457777766666554 4457899999999988888888888 Q ss_pred HHHHHHhccCCcceeeccC----CcCCHHHHHHHHHHHHHh-hc----CCceeecCCCceeE---------eccCC-hhh Q lcl|Aclame:pro 200 YNAKLYKNEATPRGILKVP----AFLDEKPKENVRKEWKRV-NK----VENIAIIDYGLEYQ---------SISMP-LQE 260 (416) Q Consensus 200 ~~~~~~~n~~~~~~v~~~~----~~~~~e~~~~~~~~~~~~-~~----~~~~~vl~~g~~~~---------~~~~~-~~d 260 (416) +...+.+..+.|--+.+.+ ...++++.+.+.+..... ++ ....++++.|+... -++.. ..- T Consensus 238 ~w~~f~Er~g~g~p~~~~p~~~~~~~~~~e~~~l~~a~~~i~~~~~~~~~ag~iiP~g~~~~~k~~~~e~~l~~~~~~~~ 317 (488) T protein:vir:95 238 YEAVGVSRDLVGMPKIGLPPDYLDENAEPEKKAFVQYCKTVVNDMIANDRAGLIWPRYIDPDTKEDIFEFSLVSRQGAKA 317 (488) T ss_pred HHHHHHHHhcccceeEeeccCCCCCcccHHHHHHHHHHHHHHHHhhccchhheeeccccccccchhhhhhhccccccCCc Confidence 8888888755544444432 222333333333333322 22 11235666665432 12221 222 Q ss_pred HHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhc----ccccchh Q lcl|Aclame:pro 261 AQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQ----KSGHYVK 336 (416) Q Consensus 261 ~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~----~~~~~~~ 336 (416) ..+.+..++..++|+.+.--.---.+...+|+++. .+.........+.-.+++|++.||+.|+.+.-. ....+.+ T Consensus 318 ~~~~~li~~~d~~Isk~iLGqtLT~~~~~~Gs~Al-~~vh~ev~~~i~~aDa~~i~~tln~~li~~l~~~Nfg~~~~~P~ 396 (488) T protein:vir:95 318 YDTGSIIDRYSKQIMMAFMSDVLAMGQSKYGSFSL-ADSKTSLLAMSVDILLKQIKNVINRDLVAQTYALNMWDDEEHVQ 396 (488) T ss_pred hhHHHHHHHHHHHHHHHHhccccccccCcchhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccE Confidence 34666777788888776532211111122344443 334456666778889999999999987754311 1122345 Q ss_pred hhhhhhhhccHHHHHHHHHHHHhCCCcCH-----HHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCC Q lcl|Aclame:pro 337 FNIDSELRGDSKTQAEYLKTLHETGVLNK-----DEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGD 411 (416) Q Consensus 337 f~~~~l~~~d~~~~~~~~~~~~~~g~~t~-----NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge 411 (416) |.++.....|.+..++++.+++..|+.-+ +.+|+.+|+|+-+.+.....+.--.+..............+.+.-+ T Consensus 397 ~~~~~~e~~Dl~~~ae~~~~L~~~G~~i~~~~~~~~i~e~~gip~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (488) T protein:vir:95 397 ITYDDIETPDLEAIGSYIQKTVAVGALEVDKELSNKLREHIGLPPADESQPVSEKLSPNSQSRSGDGYKTAGEGTAKTPS 476 (488) T ss_pred EEecCcChhhHHHHHHHHHHHHhCCCccccHHHHHHHHHHhCCCCCCCCccccccCCCCCCCCCCcccCCCcccCCcccc Confidence 55566677888999999999999999775 5799999999776665554443111110100000000000001100 Q ss_pred ccCCC Q lcl|Aclame:pro 412 NKNEG 416 (416) Q Consensus 412 ~~~~~ 416 (416) ....+ T Consensus 477 ~~~~~ 481 (488) T protein:vir:95 477 AKDPS 481 (488) T ss_pred cccch Confidence 00000 No 127 >protein:vir:3420 Length: 533 # NCBI annotation: capsid component # Family: family:all:47 # MgeID: mge:70 # MgeName: lambda # Cross-refs: genbank:acc:NP_040583;genbank:gi:9626247;genbank:GeneID:2703526 Probab=99.64 E-value=1.7e-16 Score=107.02 Aligned_cols=411 Identities=8% Similarity=-0.032 Sum_probs=229.1 Q ss_pred Ccchhhhccccccccccc---cchhHHHhhhcCcccc---------ccccccHHHHhccHHHHHHHHHHHHhhccCcceE Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHED---GFNNILLNMFGGRKTA---------SGERVSESNSLVQPDIFACVNVLSDDIAKLPIHT 68 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 68 (416) +...+.-.++. ...+.. .....+.+......+. ....-+++-+..++.+.+||+.+.+.+-...+++ T Consensus 10 ~~~~~~~~~~~-~~~y~~~a~~~~~~~~~w~p~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~nvVG~Gi~~ 88 (533) T protein:vir:34 10 LGPDGMTSLRE-YAGYHGGGSGFGGQLRSWNPPSESVDAALLPNFTRGNARADDLVRNNGYAANAIQLHQDHIVGSFFRL 88 (533) T ss_pred hcccccchHHH-HHhhhhccCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhhCCCcee Confidence 22222111100 000000 0000011100000000 0111234455578999999999999998777776 Q ss_pred EeecC------Ccc-eeeec---cchhhhhccccc------cccCHHHHHHHHHHHHHHcCCeEEEEeecCC-C--cEEE Q lcl|Aclame:pro 69 YKRTD------GGI-ERKPE---HKSAHAVYARPN------PYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH-G--YPEA 129 (416) Q Consensus 69 ~~~~~------~~~-~~~~~---~~~~~~l~~~PN------~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~-g--~~~~ 129 (416) .-.-+ ++. .+... ..++..+...|+ -.++..++...++..++..|++|+.+.+... | .+.. T Consensus 89 ~~~p~~~~lg~~~~~~~~~~~~ie~~w~~w~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~~g~~~~~~ 168 (533) T protein:vir:34 89 SHRPSWRYLGIGEEEARAFSREVEAAWKEFAEDDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQATWDTSSSRLFRTQ 168 (533) T ss_pred eeccchhhcCCChhHHHHHHHHHHHHHHHhhcCccceeccccccCHHHHHHHHHHHHHhCCceEEEeeeccCCCCccceE Confidence 54311 000 00000 123444445544 3458999999999999999999999876443 2 3567 Q ss_pred EEeeccceEEE--------------EEcCCCcEEEEEEeeC--C-----------eeEEechhheeeeccCC-CCccccc Q lcl|Aclame:pro 130 LFPLRPDYTNA--------------YVHPTTGMLWYQTVLN--G-----------KAIELYDYEVLHFKGLS-TDGIHGK 181 (416) Q Consensus 130 l~~l~p~~v~~--------------~~~~~~~~~~~~~~~~--~-----------~~~~~~~~~vih~~~~~-~~~~~G~ 181 (416) |..|+|+.+.. ..+..|.++.|.+... + ....++..+|+|+..+- +.-.+|+ T Consensus 169 lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~VlH~f~~~r~gQ~RGi 248 (533) T protein:vir:34 169 FRMVSPKRISNPNNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQKWTWIPRELPGGRASFIHVFEPVEDGQTRGA 248 (533) T ss_pred EEEechhhcCCCCCCCCCCceEeeeEECCCCCeEEEEEeecCCCCccccccceeeeeeccChhHeeeeccccCCCcccCC Confidence 88888877653 3344455555554321 1 12346778999998664 4568999 Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-----------CHHHHHHHHHHHH---H-------hhcCC Q lcl|Aclame:pro 182 SPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-----------DEKPKENVRKEWK---R-------VNKVE 240 (416) Q Consensus 182 s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-----------~~e~~~~~~~~~~---~-------~~~~~ 240 (416) |.+..+...+.......+....-.+-.+...++++.+... ..+....+..... . ....| T Consensus 249 s~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pG 328 (533) T protein:vir:34 249 NVFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGANSQEQRERLTGWIGEIAAYYAAAPVRLGGA 328 (533) T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeeecCCCcccccccccCCCcccccccccccchhhhhccCcceeeccCc Confidence 9999998888887777777776666677777777654211 1111111111111 0 12456 Q ss_pred ceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhccc-ccCCCcccHHHHHH-----------HHHHHHH Q lcl|Aclame:pro 241 NIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNE-LDKATFSNIEHQSI-----------EYVRNTL 308 (416) Q Consensus 241 ~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~-~~~~~~s~~e~~~~-----------~f~~~~l 308 (416) .+..|..|.+++.++.+.....+.+..+...+.||..+|||.+.|.. .++.|||+.-.... .|....+ T Consensus 329 ~i~~L~pGe~i~~~~~~~p~~~~~~f~~~~lr~iAaglGi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~ 408 (533) T protein:vir:34 329 KVPHLMPGDSLNLQTAQDTDNGYSVFEQSLLRYIAAGLGVSYEQLSRNYAQMSYSTARASANESWAYFMGRRKFVASRQA 408 (533) T ss_pred eeeecCCCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 78889999999988877667788899999999999999999998854 45678887644332 3333344 Q ss_pred HHHHHH-HHHHHHHhhcCchhccc---------ccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 309 QPWIVN-FEQELNVKLFLDHDQKS---------GHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIE 378 (416) Q Consensus 309 ~P~~~~-i~~~l~~~l~~~~~~~~---------~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ 378 (416) .|+.+. +++++-.-.++...... -..+.+-.-.....|+...+++...++++|++|.-|+-.+.|.++.+ T Consensus 409 ~pi~~~wl~~ail~G~i~~p~~~~~~~~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~s~~~~~a~~G~D~~e 488 (533) T protein:vir:34 409 SQMFLCWLEEAIVRRVVTLPSKARFSFQEARSAWGNCDWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECAKRGDDYQE 488 (533) T ss_pred HHHHHHHHHHHHHcCcccCCCccCCCchhhHHhhhceeeccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHH Confidence 554443 33333332222111000 01123333334566899999999999999999999999999998853 Q ss_pred CC----------CeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 379 NG----------DKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 379 gg----------d~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) -- +++-++....+. ...........+....++.+ T Consensus 489 v~~q~a~e~~~~~~~gl~~~~~~~----~~~~s~~~~~~~~~~~~~~~ 532 (533) T protein:vir:34 489 IFAQQVRETMERRAAGLKPPAWAA----AAFESGLRQSTEEEKSDSRA 532 (533) T ss_pred HHHHHHHHHHHHHhcCCCCCCCCC----cCccCCCCCCCCCCcccCCC Confidence 21 222222211111 00000000111111111122 No 128 >protein:vir:79511 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1870 # MgeName: P74-26 # Cross-refs: genbank:acc:YP_001468055;genbank:gi:157265497;genbank:GeneID:5600628 Probab=99.64 E-value=1.2e-15 Score=102.46 Aligned_cols=396 Identities=11% Similarity=0.040 Sum_probs=225.5 Q ss_pred Ccchhhhcccccccccccc----------chhHHHhhhcCcccc----------ccccccHHHHhccHHHHHHHHHHHHh Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDG----------FNNILLNMFGGRKTA----------SGERVSESNSLVQPDIFACVNVLSDD 60 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~----------~~~~~~~~~~~~~~~----------~~~~~~~~~a~~~~~v~~~i~~ia~~ 60 (416) |-=++ -|.+...+.+... ....+.+....+.+. ....+ .+...+.+.|.+|+..+... T Consensus 1 m~k~~-~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~l-y~~m~~D~hi~s~l~~Rk~a 78 (448) T protein:vir:79 1 MAKRG-RKPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLV-YHKMLSDGTVKNALNYIFGR 78 (448) T ss_pred CCCCC-CCCccccCcccccccccchhhhhhhhhhcccccccccccchhHhhccccchHH-HHHHhhChHHHHHHHHHHHH Confidence 54222 1111111111000 000011111111010 01111 23345678899999999999 Q ss_pred hccCcceEEeecCCcceeeeccchhhhhcccccc---ccCHHHHHHHHHHHHHHcCCeEEEEeec--CCCc--EEEEEee Q lcl|Aclame:pro 61 IAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNP---YMTAFTWKKLMMTHVLTWGNAYSYIQFG--SHGY--PEALFPL 133 (416) Q Consensus 61 ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~---~~s~~~f~~~~~~~~l~~G~~~~~i~r~--~~g~--~~~l~~l 133 (416) |.+++|.|....++......- ......+..+.. ..++.+++..++ +.+.+|-+++++++. ..|. +..+.+. T Consensus 79 v~~~~w~v~p~~~~~~~~~~a-e~v~~~l~~~~~~~~~~~f~~~~~~~l-da~~~G~s~~Eivw~~~~~g~~~~~~l~~r 156 (448) T protein:vir:79 79 IRSAKWYVEPASTDPEDIAIA-AFIHAQLGIDDASVGKYPFGRLFAIYE-NAYIYGMAAGEIVLTLGADGKLILDKIVPI 156 (448) T ss_pred HhcCCceEecCCCCHHHHHHH-HHHHHHhhhhhhhhccCCHHHHHHHHH-HhhhhcceeEEEEeeecCCCceeccccccc Confidence 999999997543322111111 111222233332 234556665554 457899999999864 3454 4466666 Q ss_pred ccceEE-EEEcCCCcEEEEEEeeC-------CeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 134 RPDYTN-AYVHPTTGMLWYQTVLN-------GKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLY 205 (416) Q Consensus 134 ~p~~v~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~ 205 (416) ++.++. +..+.+++..+...... ...+.+|..-++|..+......+|.+.+..|.-..-.-....+....+. T Consensus 157 ~~~~~~~f~~~~d~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~ 236 (448) T protein:vir:79 157 HPFNIDEVLYDEEGGPKALKLSGEVKGGSQFVSGLEIPIWKTVVFLHNDDGSFTGQSALRAAVPHWLAKRALILLINHGL 236 (448) T ss_pred CCccccceeeecCCceEEeecCCcccccccCCCccccccceEEEEecCccCCcccchhHHHHHHHHHHHHHHHHHHHHHH Confidence 765432 33445555544432211 1234567788888865444457899999999998888999999999999 Q ss_pred hccCCcceeeccCCcC--CHHHHHHHHHHHHHhhcC-CceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccch Q lcl|Aclame:pro 206 KNEATPRGILKVPAFL--DEKPKENVRKEWKRVNKV-ENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPL 282 (416) Q Consensus 206 ~n~~~~~~v~~~~~~~--~~e~~~~~~~~~~~~~~~-~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~ 282 (416) +..+.|--+.+.+... ++++.+.+.+.......+ ...+|++.|++++-++.+..-.++.+..++..++|+.+.-= - T Consensus 237 E~yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~~a~~iiP~~~~ie~~ea~~~~~~~~~~i~~~d~~Isk~iLG-q 315 (448) T protein:vir:79 237 ERFMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKPRHGIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIARALGI-D 315 (448) T ss_pred HHcCCceEEEecCCCCCcCHHHHHHHHHHHHHHhcCCceEEEecCCceEEEEecCCCcccHHHHHHHHHHHHHHHHhh-h Confidence 9999998888887544 356666777766655422 23578999998887766555556778888888888876632 2 Q ss_pred hhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcc----cccchhhhhhhhhhccHHHHHHHHHHHH Q lcl|Aclame:pro 283 HKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQK----SGHYVKFNIDSELRGDSKTQAEYLKTLH 358 (416) Q Consensus 283 ~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~----~~~~~~f~~~~l~~~d~~~~~~~~~~~~ 358 (416) .+-...++|+++...........+.+.-.+++|++.||+.|+.+.-.. ...+.+|.++.....|.+..++...+++ T Consensus 316 tlTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~li~~l~~lNfg~~~~~P~~~f~~~e~~Dl~~~a~~~~~l~ 395 (448) T protein:vir:79 316 FNTVQLNMGVQAINIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPSATRFPRLTFEMEERNDFSAAANLMGMLI 395 (448) T ss_pred hhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcEEEecCCChHHHHHHHHHhhhhh Confidence 221122223334433333455667778899999999999877543111 1112233344455678888899999998 Q ss_pred hCCCcCHHHHHHHhCCCC-CCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 359 ETGVLNKDEIRELLERNP-IENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 359 ~~g~~t~NE~R~~~gl~p-~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ..+-..-+-+|+.+|+|. .|+. ....+. ..+ ...+.++...+. T Consensus 396 ~~~~~~~~~~~~~~~~p~~~~~~-~~~a~~------------~~~--~~~~~~~~~~~~ 439 (448) T protein:vir:79 396 NAVKDSEDIPTELKALIDALPSK-MRRALG------------VVD--EVREAVRQPADS 439 (448) T ss_pred ccchhhHHHHHHhhcCCCCCCCc-cccccC------------CCC--cccccccCCccc Confidence 877666666788899984 4432 111110 000 001112222222 No 129 >protein:vir:6382 Length: 553 # NCBI annotation: portal protein Lambda B # Family: family:all:47 # MgeID: mge:133 # MgeName: BcepNazgul # Cross-refs: genbank:acc:NP_918995;genbank:gi:34610170;genbank:GeneID:2559575 Probab=99.63 E-value=5.3e-16 Score=104.32 Aligned_cols=413 Identities=9% Similarity=0.000 Sum_probs=230.2 Q ss_pred Ccchhhhccccccccccc----------------cchhHHHhhhcCcccc---------ccccccHHHHhccHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHED----------------GFNNILLNMFGGRKTA---------SGERVSESNSLVQPDIFACVN 55 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~v~~~i~ 55 (416) |+ +--.+.-....+.. ..+..+........+. ....-+++-+..++.+.++|+ T Consensus 1 m~--~~~~r~~~~~a~~~~~~~~~~~~~~y~gA~~~~r~~~~w~~~~~s~~~~~~~~~~~lr~RaRdL~rNn~~a~~av~ 78 (553) T protein:vir:63 1 MT--KVTVRKLSEVTSGRPEQSASLGGGGLEGASRLSRETVSWNPSLRSPDALINPLKRIADARGRDMADNDGFTNGAVG 78 (553) T ss_pred Cc--chhhhhhcccccccchhhhhhhcccccccccCCCcccccccCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHH Confidence 22 11111000000000 0000000000000000 001123445556888999999 Q ss_pred HHHHhhccCcceEEeecCC----cceeeec-------cchhhhhccccc------cccCHHHHHHHHHHHHHHcCCeEEE Q lcl|Aclame:pro 56 VLSDDIAKLPIHTYKRTDG----GIERKPE-------HKSAHAVYARPN------PYMTAFTWKKLMMTHVLTWGNAYSY 118 (416) Q Consensus 56 ~ia~~ia~~~~~~~~~~~~----~~~~~~~-------~~~~~~l~~~PN------~~~s~~~f~~~~~~~~l~~G~~~~~ 118 (416) .+...+-...+++.-.-+. +...... ..++..+...++ -.++..++...++..++..|++|+. T Consensus 79 ~~~~nvVG~Gi~~~~~~~~~~l~g~~~~~~~~~~~~ie~~w~~wa~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~ 158 (553) T protein:vir:63 79 YQRDSIVGAQYRLNSMPDINVIPGATEEWAEEYQTIVEAKFELYAESLACYIDNAAISTFTGLIRLGVVGYVKTGEVLAT 158 (553) T ss_pred HHHHhhccCCceeeeccchhhhcCCCHHHHHHHHHHHHHHHHHhcCCccceeeccccCCHHHHHHHHHHHHHhCCceEEE Confidence 9999888888876533110 0000000 123344555544 3467899999999999999999999 Q ss_pred EeecCC-C--cEEEEEeeccceEEE--------------EEcCCCcEEEEEEeeC--C----------------eeEEec Q lcl|Aclame:pro 119 IQFGSH-G--YPEALFPLRPDYTNA--------------YVHPTTGMLWYQTVLN--G----------------KAIELY 163 (416) Q Consensus 119 i~r~~~-g--~~~~l~~l~p~~v~~--------------~~~~~~~~~~~~~~~~--~----------------~~~~~~ 163 (416) +.+... | .+..|..|+|+.+.. ..+..|.++.|.+... + ....++ T Consensus 159 ~~~~~~~~~~~~~~lq~ie~drl~~~~~~~~~~~i~~GVE~d~~Gr~vaY~i~~~hPgd~~~~~~~~~~~~r~~~~~~v~ 238 (553) T protein:vir:63 159 AEWDRAANRPYATCFQMVSTDRLSNPYQQLDTPTLRRGVQYDKRGRPQGYWIQVAHPGDLYQMAPDMYKWKFVQQSKPWG 238 (553) T ss_pred eeeccCCCCcccceEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEeeccCCCccccccccccceeeeccccccC Confidence 865433 2 356788888877753 3334455555554221 0 123578 Q ss_pred hhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHH------------- Q lcl|Aclame:pro 164 DYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENV------------- 229 (416) Q Consensus 164 ~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~------------- 229 (416) ..+|+|+..+- +.-.+|+|.+..+...+.......+......+-.+...++++.+... +...+.+ T Consensus 239 a~~vlH~f~~~r~gQ~RGis~lapvl~~l~~l~~y~daeL~~a~i~A~~a~fi~~~~~~-~~~~~~~~~~~~~~~~~~~~ 317 (553) T protein:vir:63 239 RRQVIHILEPREPDQSRGIADIVSGLKDMRMAKRFKEMSLQNAVINASYAAAIESELPP-EFIHSQMSGGSPNADMVGIF 317 (553) T ss_pred hhHheecccccCCCcccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCh-hhhhhhcccccccccccccc Confidence 99999998664 45689999999998888887777777776666677777777754311 1111111 Q ss_pred -------HHHHHH----hhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhccc-ccCCCcccHH Q lcl|Aclame:pro 230 -------RKEWKR----VNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNE-LDKATFSNIE 297 (416) Q Consensus 230 -------~~~~~~----~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~-~~~~~~s~~e 297 (416) .....+ ..+.|.+..|..|.+++.++.+-....+.+..+...+.||..+|||.+.|.. .++.|||+.- T Consensus 318 ~~~~~~~~~~~~~~~~~~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~F~~~~lr~iaaglGi~Ye~lt~D~s~~nYSS~R 397 (553) T protein:vir:63 318 GKYMDALKAYVGGANNIQIDGAKIPHLFPGTKLNLKPMGTPGGVGSEFEASLNRHLASAFGMSYEEFTRDFSKANYSSIQ 397 (553) T ss_pred cccccccccccccccceeecCceeeecCCCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcccccHHHHH Confidence 111111 1245678889999999988877666788899999999999999999887754 4566888764 Q ss_pred HHHHH-----------HHHHHHHHHHHHH-HHHHHHhhcCchhccc------------ccchhhhhhhhhhccHHHHHHH Q lcl|Aclame:pro 298 HQSIE-----------YVRNTLQPWIVNF-EQELNVKLFLDHDQKS------------GHYVKFNIDSELRGDSKTQAEY 353 (416) Q Consensus 298 ~~~~~-----------f~~~~l~P~~~~i-~~~l~~~l~~~~~~~~------------~~~~~f~~~~l~~~d~~~~~~~ 353 (416) ..... |....++|+.+.+ +.++-.-.++-..... -..+.+-.-.....|+...+++ T Consensus 398 ~~~~e~~r~~~~~q~~~~~~~~~pi~~~wl~~a~l~G~i~~p~~~~~~~~~~p~~~~a~~~~~w~~p~~~~iDP~Ke~~A 477 (553) T protein:vir:63 398 AGIAMTRRFLEGRKKMCADRLATEFFTLWLEEAIAAGEVPMPPGQTRDLFYQPLMKEALSKCEWIGASQGQIDQLKETQA 477 (553) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccchhhcchhhhhhhhceeeecCCccccChHHHHHH Confidence 43333 3344444543332 2222221221111100 0011222223455689999999 Q ss_pred HHHHHhCCCcCHHHHHHHhCCCCCCC----------CCeEeeccCccccccccccccccCC--cccCCCCccCCC Q lcl|Aclame:pro 354 LKTLHETGVLNKDEIRELLERNPIEN----------GDKYISSLNYVFLDFLEEYQRLKAG--GAMKGGDNKNEG 416 (416) Q Consensus 354 ~~~~~~~g~~t~NE~R~~~gl~p~~g----------gd~~~~~~n~~~~~~~~~~~~~~~~--~~~~gge~~~~~ 416 (416) ...++++|+.|.-|+-.+.|.+|.+- .+++=++.+..+-......+....+ +..+.++++++| T Consensus 478 ~~~~i~~G~~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (553) T protein:vir:63 478 AVMRIDAGLSTYEREIARLGGDFRKSFAQRAREDALLKKYGLTFNLSAKRSLGDGRDAATGIAEDPAAAQTSQQG 552 (553) T ss_pred HHHHHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCCCCCCccccCCCcccCCCCCCCCCCCCccccc Confidence 99999999999999999899987531 2222222222222111111111111 222234444444 No 130 >protein:vir:77981 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1843 # MgeName: P23-45 # Cross-refs: genbank:acc:YP_001467939;genbank:gi:157265380;genbank:GeneID:5600471 Probab=99.60 E-value=1e-14 Score=97.35 Aligned_cols=386 Identities=11% Similarity=0.056 Sum_probs=221.7 Q ss_pred Ccchhhhccccccc--cccccc------------hhHHHhhhcCccc----------cccccccHHHHhccHHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSS--DHEDGF------------NNILLNMFGGRKT----------ASGERVSESNSLVQPDIFACVNV 56 (416) Q Consensus 1 m~~~~~f~~~~~~~--~~~~~~------------~~~~~~~~~~~~~----------~~~~~~~~~~a~~~~~v~~~i~~ 56 (416) |= +|+.+.+ .+.... ...+.+....+.+ .....+ .+.....+.|.+|+.. T Consensus 1 m~-----kk~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~l-y~~m~~D~hi~s~l~~ 74 (448) T protein:vir:77 1 MA-----KRGRKPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLV-YHKMLSDGTVKNALNY 74 (448) T ss_pred CC-----CCCCCCcccCCcccccchhhhhhhccchhhhcccccccccccchhHhhccccchHH-HHHHhhChHHHHHHHH Confidence 43 3322221 111110 0000100000000 011111 2334567889999999 Q ss_pred HHHhhccCcceEEeecCCcceeeeccchhhhhccccc---cccCHHHHHHHHHHHHHHcCCeEEEEeec--CCCc--EEE Q lcl|Aclame:pro 57 LSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPN---PYMTAFTWKKLMMTHVLTWGNAYSYIQFG--SHGY--PEA 129 (416) Q Consensus 57 ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN---~~~s~~~f~~~~~~~~l~~G~~~~~i~r~--~~g~--~~~ 129 (416) +...|.+++|.|...+++....... ......+..+. ...++.+++..+ .+.+.+|-+++++++. ..|. +.. T Consensus 75 Rk~av~~~~w~v~p~~~~~~d~~~a-e~v~~~l~~~~~~~~~~~f~~~i~~~-lda~~~G~s~~Eivw~~~~dg~~~~~~ 152 (448) T protein:vir:77 75 IFGRIRSAKWYVEPASTDPEDIAIA-AFIHAQLGIDDASVGKYPFGRLFAIY-ENAYIYGMAAGEIVLTLGADGKLILDK 152 (448) T ss_pred HHHHHhcCCceEecCCCCHHHHHHH-HHHHHHhhchhhhhccCCHHHHHHHH-HHhhhhcceeEEEEEeecCCCceeecc Confidence 9999999999997543332211111 11122222222 234677788777 4778999999999874 3454 446 Q ss_pred EEeeccceEE-EEEcCCCcEEEEEEeeC-------CeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 130 LFPLRPDYTN-AYVHPTTGMLWYQTVLN-------GKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYN 201 (416) Q Consensus 130 l~~l~p~~v~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~ 201 (416) +.+.++..+. ...+.+++..+...... .....+|...++|..+......+|.|.+..|.-..-.-....+.. T Consensus 153 l~~r~~~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w 232 (448) T protein:vir:77 153 IVPIHPFNIDEVLYDEEGGPKALKLSGEVKGGSQFVNGLEIPIWKTVVFLHNDDGSFTGQSALRAAVPHWLAKRALILLI 232 (448) T ss_pred ccccCCCccceeeeecCCceEEEecCCcccccccCCCccccccceEEEEecCCcCCcccchHHHHHHHHHHHHHhhHHHH Confidence 7777765432 33445555544332211 123456788888887644445789999999999888888889999 Q ss_pred HHHHhccCCcceeeccCCcC--CHHHHHHHHHHHHHhhcC-CceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 202 AKLYKNEATPRGILKVPAFL--DEKPKENVRKEWKRVNKV-ENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIY 278 (416) Q Consensus 202 ~~~~~n~~~~~~v~~~~~~~--~~e~~~~~~~~~~~~~~~-~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~ 278 (416) ..+.+..|.|--+.+.+... ++++.+.+.+.......+ ...++++.|++++-++.+....++.+..++..++|+.+. T Consensus 233 ~~f~E~yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~~a~~iiP~g~~ie~~ea~~~~~~~~~~i~~~d~~Isk~i 312 (448) T protein:vir:77 233 NHGLERFMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKPRHGIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIARAL 312 (448) T ss_pred HHHHHHcCCceeEEecCCCCCCCHHHHHHHHHHHHHHhcCCceEEEecCCceEEEEecCCCccCHHHHHHHHHHHHHHHH Confidence 99999999998898887543 456667777766655322 235788999888777665555567788888889998877 Q ss_pred ccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhc-----c-cccchhhhhhhhhhccHHHHHH Q lcl|Aclame:pro 279 KVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQ-----K-SGHYVKFNIDSELRGDSKTQAE 352 (416) Q Consensus 279 gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~-----~-~~~~~~f~~~~l~~~d~~~~~~ 352 (416) --. .+-.....|+++.............+.-.+++|++.||+.|+.+.-. . .-.++.|+ .....|.+..++ T Consensus 313 LGq-tlTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~Li~~l~~lNfg~~~~~P~~~f~--~~e~eDl~~~a~ 389 (448) T protein:vir:77 313 GID-FNTVQLNMGVQAVNIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPGATRFPRLTFE--MEERNDFSAAAN 389 (448) T ss_pred hcc-ccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEec--CCChhhHHHHHH Confidence 432 22222233334444334345667777889999999999988654311 1 11234444 445678888888 Q ss_pred HHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 353 YLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 353 ~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ...+++ +-+|+.+|+|.--++..... ...++... + ....+..... T Consensus 390 ~~~~l~-------~~~~~~~~ip~~~~~~~~~~---------~~~~~~~~--~-~~~~~~~~~~ 434 (448) T protein:vir:77 390 LMGMLI-------NAVKDSEDIPTELKALIDAL---------PSKMRRAL--G-VVDEVREAVR 434 (448) T ss_pred HhHHHH-------HHHHHHhcCCccCCcCCCCC---------chhccccc--C-CCCCCCchhh Confidence 888876 46899999985322111000 01111100 0 0011111111 No 131 >protein:vir:10321 Length: 495 # NCBI annotation: ORF23 # Family: family:all:47 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758916;genbank:gi:27311190;genbank:GeneID:956137 Probab=99.58 E-value=1.2e-15 Score=102.41 Aligned_cols=410 Identities=12% Similarity=-0.002 Sum_probs=216.8 Q ss_pred Ccchhhhccccccc------cccccchhHHHhhhcCcccc--------ccccccHHHHhccHHHHHHHHHHHHhhccCcc Q lcl|Aclame:pro 1 MLLERMFEKRSGSS------DHEDGFNNILLNMFGGRKTA--------SGERVSESNSLVQPDIFACVNVLSDDIAKLPI 66 (416) Q Consensus 1 m~~~~~f~~~~~~~------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~ 66 (416) |+=..++-.+.... .+.......-...++..+.. ....-+++-+..++.+..+|+.+.+.+-...+ T Consensus 3 ~~~~~~~a~~~~~~~~~~~~~y~aa~~~~~~~~~~~~s~d~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~~vVG~Gi 82 (495) T protein:vir:10 3 MTPSGYQSLASGLLVPVGASAYEGASGGHRWQDIGDYGPDTAVASGIQTLRARSHHNVRNNPWATNAVATWVAAAVGNGL 82 (495) T ss_pred cccccccccchhhhhHHHhhhhhccccCcccCCCCCCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHhhcCCCc Confidence 22222221110000 00000000000000000000 00112334455688999999999999976666 Q ss_pred eEEeecCCcceeeeccchhhhhcccc--ccccCHHHHHHHHHHHHHHcCCeEEEEeecC--C--CcEEEEEeeccceEEE Q lcl|Aclame:pro 67 HTYKRTDGGIERKPEHKSAHAVYARP--NPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS--H--GYPEALFPLRPDYTNA 140 (416) Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~l~~~P--N~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~--~--g~~~~l~~l~p~~v~~ 140 (416) +..-..++......-..++..+..++ .-.++..++...++..++..|++|+.+.... . ..+..|..|+|+.+.. T Consensus 83 ~p~~~~~~~~~~~~ie~~w~~wa~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~~~~~~~g~~~~~~lqliepd~l~~ 162 (495) T protein:vir:10 83 TPRWRMKEQELRQELQELWGDWVNEADFDEVQSFYGLQALVVRTVINSGEAFVIKKPRPLSEGLSVPLQLQIIEPDMLAS 162 (495) T ss_pred ccccCCchHHHHHHHHHHHHHhhcCcccccccCHHHHHHHHHHHHHhCCceEEEEeecccCCCCccceEEEEechhhcCC Confidence 65433222111111112333343333 2347899999999999999999999886532 2 3467888888888752 Q ss_pred -----------------EEcCCCcEEEEEEee-----------CCeeEEechhheeeeccCCCCccccccHHHHHHHHHH Q lcl|Aclame:pro 141 -----------------YVHPTTGMLWYQTVL-----------NGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIG 192 (416) Q Consensus 141 -----------------~~~~~~~~~~~~~~~-----------~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~ 192 (416) ..+..|....|.+.. ....+.+|+++|+|+....+.-.+|+|.+..+.. +. T Consensus 163 ~~~~~~~~~g~~i~~GIe~d~~Gr~vaY~i~~~hpgd~~~~~~~~~~~rvpA~~vlH~f~~r~gQ~RGis~la~i~~-l~ 241 (495) T protein:vir:10 163 DIPDETLPSGGYVKGGIRFSNGGKRKAYCFYRNHPAESSLIGDPVDTVWIKAEHVLHVTVLTVRSDAGAPWFQLLLR-LN 241 (495) T ss_pred CCCCCCCCCCCEEEeceEECCCCceEEEEEeecCCCcccccccccceeeechhheEeccccCCCcccCcchhHHHHH-HH Confidence 122334444454421 1124679999999996444455789987655443 44 Q ss_pred HHHHHHHHHHHHHhccCCcceeeccCCcCC-------HHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHH Q lcl|Aclame:pro 193 AQAAATKYNAKLYKNEATPRGILKVPAFLD-------EKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVE 265 (416) Q Consensus 193 ~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~-------~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e 265 (416) ......+......+-.+...++++.+..-. .+..+.-. .-....+.|.+..|..|.+++..+.+..-..+.+ T Consensus 242 ~l~~y~dael~~a~i~A~~~~fi~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~ 320 (495) T protein:vir:10 242 ELDQYEDAELVRKKTAALFAAFIQEATADSTGGPTIGQPKRSKGG-KRITGLNPGTLQYLQPGQEVKFSNPADVGTTYEP 320 (495) T ss_pred HhhHHHHHHHHHHHHhhhheeeeecCCCccccccccCccccccCc-ccceecCCceeeecCCCCeeeeeCCCCCCCCHHH Confidence 444444444444444555666666432110 00000000 0011234577888999999999887666678889 Q ss_pred HHHHHHHHHHHHhccchhhcc-cccCCCcccHHHHHHHHHH------------HHHHHHHHH-HHHHHHHhhcCchhccc Q lcl|Aclame:pro 266 SMKFNKAQISMIYKVPLHKLN-ELDKATFSNIEHQSIEYVR------------NTLQPWIVN-FEQELNVKLFLDHDQKS 331 (416) Q Consensus 266 ~~~~~~~~Ia~~~gvp~~~lg-~~~~~~~s~~e~~~~~f~~------------~~l~P~~~~-i~~~l~~~l~~~~~~~~ 331 (416) ..+...+.||..+|||.+.|. ...+.|||+.-+....|.+ ..++|+.+. ++.++-.-.++...... T Consensus 321 f~~~~lr~iaaglGi~Ye~ltgD~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~~pi~~~~l~~a~l~G~i~~p~~~~ 400 (495) T protein:vir:10 321 WLRYQLLSIAKGYGITYEMLTGDLRGVNYSSIRAGLLEFRRLCQQVQHHMIIHQFCRPVGRWFMDFAVASGAVVIPDYLQ 400 (495) T ss_pred HHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCchh Confidence 999999999999999999884 5556678766554333322 222333332 22232222221111100 Q ss_pred ----ccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC----------CCeEeeccCccccccccc Q lcl|Aclame:pro 332 ----GHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN----------GDKYISSLNYVFLDFLEE 397 (416) Q Consensus 332 ----~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g----------gd~~~~~~n~~~~~~~~~ 397 (416) -..+.+-.-.....|+...+++...++++|++|.-|+-.+.|.++.+- .+++=++.+..|.-... T Consensus 401 ~~~~~~~~~w~~p~~~~vDP~Ke~~A~~~~i~~G~~s~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~p~~~~~- 479 (495) T protein:vir:10 401 RRRYYNRVSWRTPRWEEVDPLKKHLADLGDVRAGFAPISDKQAERGYDMEELFDMISDANQLIDEYDLRLDSDPRYVNG- 479 (495) T ss_pred hhHhhhccccccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCcCCC- Confidence 011233333445679999999999999999999999999999998532 12222222211111100 Q ss_pred cccccCCcccCCCCccCC Q lcl|Aclame:pro 398 YQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 398 ~~~~~~~~~~~gge~~~~ 415 (416) ....+...+..+.+|| T Consensus 480 --~~~~~~~~~~~~~~~e 495 (495) T protein:vir:10 480 --SGAEQKSVMEAALNNE 495 (495) T ss_pred --ccCCCCCCCCCCCCCC Confidence 1111122222333333 No 132 >protein:vir:95542 Length: 548 # NCBI annotation: Putative portal protein # Family: family:all:47 # MgeID: mge:1574 # MgeName: F10 # Cross-refs: genbank:acc:YP_001293348;genbank:gi:148912769;genbank:GeneID:5228194 Probab=99.57 E-value=6.8e-16 Score=103.73 Aligned_cols=415 Identities=11% Similarity=-0.009 Sum_probs=220.5 Q ss_pred Ccchh-hhcccccc------------ccccccchhHHHhhhcCcccc---------ccccccHHHHhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLER-MFEKRSGS------------SDHEDGFNNILLNMFGGRKTA---------SGERVSESNSLVQPDIFACVNVLS 58 (416) Q Consensus 1 m~~~~-~f~~~~~~------------~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~v~~~i~~ia 58 (416) |-|-. ....-+.. ..+...........+....+. ....-+++-+..++.+..+|+.+. T Consensus 1 Mn~iDr~i~~~sP~~a~~R~~ar~~~~~y~aa~~~r~~~~~~~~~s~~~~i~~~~~~lr~RaRdL~rNn~~a~~av~~~~ 80 (548) T protein:vir:95 1 MNLIDRLLEPLAPELVARRLAAREAIQAYEAARPGRTHKAKRQPLGADTSLQKSAVSMREQCRKLDEDHDLVTGLLDRLE 80 (548) T ss_pred CchHHhHhhhcchHHHHHHHHhHHHhccccccCccccccccCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH Confidence 43222 22111100 000000000000000000000 001123344556888999999987 Q ss_pred Hhhcc---CcceEEeecCCcc-eeeec---cchhhhhccccc--cccCHHHHHHHHHHHHHHcCCeEEEEeecCC----- Q lcl|Aclame:pro 59 DDIAK---LPIHTYKRTDGGI-ERKPE---HKSAHAVYARPN--PYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH----- 124 (416) Q Consensus 59 ~~ia~---~~~~~~~~~~~~~-~~~~~---~~~~~~l~~~PN--~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~----- 124 (416) +.+-. +.++-.....++. .+... ..++..+..++. -.++.+++...++..++..|++|+.+.+... T Consensus 81 ~nvVG~~G~~i~p~~l~~d~~~a~~l~~~ie~~w~~Wa~~~D~~g~~~f~~lq~l~~R~~~~dGE~f~~~~~~~~~~~~~ 160 (548) T protein:vir:95 81 ERVVGGSGIGVEPLPLRLDGSVHAELAMEIRSAWAEWSLSPETSGELTRPQVERLMCRTWLRDGEGLAQKLMGRVPNYTF 160 (548) T ss_pred HhccCccccceeeeecCCCHHHHHHHHHHHHHHHHHhhcCccccccCCHHHHHHHHHHHHHhCCceEEEeeecccccccC Confidence 77764 2322221111111 00000 112333433332 3478999999999999999999999876432 Q ss_pred --CcEEEEEeeccceEEE-------------EEcCCCcEEEEEEeeC-----------CeeEEechhheeeeccCC-CCc Q lcl|Aclame:pro 125 --GYPEALFPLRPDYTNA-------------YVHPTTGMLWYQTVLN-----------GKAIELYDYEVLHFKGLS-TDG 177 (416) Q Consensus 125 --g~~~~l~~l~p~~v~~-------------~~~~~~~~~~~~~~~~-----------~~~~~~~~~~vih~~~~~-~~~ 177 (416) ..+..|..|+|+.+.. ..+..|..+.|.+... ...+.+++++|+|+..+. ..- T Consensus 161 g~~~~~~lqliepd~l~~~~~~~~~~i~~GIE~D~~Grp~aY~i~~~hPgd~~~~~~~~~~~rvpA~~VlHif~~~r~gQ 240 (548) T protein:vir:95 161 ATSVPFALELLEPDYLPFSYNNLSKGIVQGIERDTWRRKRAYHLLKDHPGNLQTLGGSLAVKRVEAERIIHIAYRKRIGQ 240 (548) T ss_pred CcccceEEEEechhhcCCCCCCCCCceeeeeEECCCCceEEEEEeecCCCcccccccccceeeechhHheecccccCCcc Confidence 2467888999987743 3334455555554321 124679999999998664 446 Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHH--HHHHHHHHHHHhhcCCcee-ecCCCceeEec Q lcl|Aclame:pro 178 IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEK--PKENVRKEWKRVNKVENIA-IIDYGLEYQSI 254 (416) Q Consensus 178 ~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e--~~~~~~~~~~~~~~~~~~~-vl~~g~~~~~~ 254 (416) .+|+|.+..+...+.......+......+-.+...++++.+...... ....-.... .....|.++ .|..|.+++.+ T Consensus 241 ~RGvs~lapvl~~l~~l~~y~dael~~aki~A~~a~fi~~~~~~~~~~~~~~~~~~~~-~~~~pG~iv~~L~pGe~i~~~ 319 (548) T protein:vir:95 241 NRGVPMLHAVLIRLADLKDYEESERVAARISAALAMYIKKGNPDSYTVEPGKDRKNRT-IPIAPGMVFDDLEPGEDVGMI 319 (548) T ss_pred ccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCccccCCCCccccccc-ccccCCccccccCCCceeeec Confidence 89999999998888888777777776666677777777764321110 000000000 012234443 58999999888 Q ss_pred cCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHH-----------HHHHHHHHHHHH-HHHHHHHh Q lcl|Aclame:pro 255 SMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIE-----------YVRNTLQPWIVN-FEQELNVK 322 (416) Q Consensus 255 ~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~-----------f~~~~l~P~~~~-i~~~l~~~ 322 (416) +.+.....+.+..+...+.||..+|||.+.|....++|||+.-..... |...-++|+... ++.++-.- T Consensus 320 ~p~~p~~~~~~f~~~~lr~IAaglGipYe~ltgD~s~nYSS~R~~l~e~~r~~~~~q~~~i~~~~~Pi~~~wle~a~l~G 399 (548) T protein:vir:95 320 ESNRPNPFLEGFRNGQLRMIGAGTRSTYSSVSRAYDGTYSAQRQELVEGWLGYDLLQHEFIDYWCRPVYRSWLQMYLLAR 399 (548) T ss_pred CCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC Confidence 876666788899999999999999999988876656788766554333 333344443332 22232222 Q ss_pred hcCchhc---ccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC----------CCeEeeccCc Q lcl|Aclame:pro 323 LFLDHDQ---KSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN----------GDKYISSLNY 389 (416) Q Consensus 323 l~~~~~~---~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g----------gd~~~~~~n~ 389 (416) .++.... .....+.+-.-.....|+...+++...++++|+.|.-|+-.+.|.++.+- .+++=++... T Consensus 400 ~i~lP~~~~~~~~~~~~W~~P~~~~iDP~Kea~A~~~~i~~Gl~T~~~~~a~~G~D~~ev~~q~a~E~~~~~~~GL~~~~ 479 (548) T protein:vir:95 400 KERLPADVDHRTLYAAVYQGPVMPWINPMHEANAWELLVKAGFADEAEVARARGRDPRELKKSRETEIKANRAAGLVFSS 479 (548) T ss_pred CcCCCCCCCchhheeeeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCCCC Confidence 2211110 00112222223344568999999999999999999999988888887431 1122222111 Q ss_pred cccccc----cccccccCCccc-----CCCCccCCC Q lcl|Aclame:pro 390 VFLDFL----EEYQRLKAGGAM-----KGGDNKNEG 416 (416) Q Consensus 390 ~~~~~~----~~~~~~~~~~~~-----~gge~~~~~ 416 (416) .|.... ..+.+..+.... ..||..+|= T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (548) T protein:vir:95 480 DAYHQLVKSGMDPVEAVQKVYLGVGKMLTADEAREL 515 (548) T ss_pred cccccccccccCCCCchhhhccccccccccchhHHh Confidence 111100 000000000000 001111111 No 133 >protein:vir:98816 Length: 446 # NCBI annotation: hypothetical protein # Family: family:all:32558 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851097;genbank:gi:117530254;genbank:GeneID:4484480 Probab=99.53 E-value=1.7e-14 Score=96.09 Aligned_cols=366 Identities=11% Similarity=0.068 Sum_probs=208.5 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccc------cccc------cccHHHHhccHHHHHHHHHHHHhhccCcceE Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKT------ASGE------RVSESNSLVQPDIFACVNVLSDDIAKLPIHT 68 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~------~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 68 (416) |-..--+........... ....-.+...+... ..+. .+.++...+.+.|.+|+..+...|.+++|.| T Consensus 1 ~~~~~~~~p~~~~~~~~~-~~~~~~~~~~g~~~~D~~lr~~gg~~~~~~~l~~~m~e~D~~v~s~l~~Rk~av~~~~w~V 79 (446) T protein:vir:98 1 MNMEVRNAPTPAIRRRTI-YAMEHLGLATSYLSEDGGYKRAGKPTYQQLSAWDEAAQTEPIIAQGLDSIALSVLNKVGPY 79 (446) T ss_pred CcccccCCCchhhhhhhh-hccccchhhcccCCcchHhhhcCCChHHHHHHHHHHHhcchHHHHHHHHHHHHhhcCCcee Confidence 221110110000000000 00000111111100 0111 2222333357899999999999999999999 Q ss_pred EeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC-C--cEE----EEEeeccceEEEE Q lcl|Aclame:pro 69 YKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH-G--YPE----ALFPLRPDYTNAY 141 (416) Q Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~-g--~~~----~l~~l~p~~v~~~ 141 (416) ...+++ .-.-+...|...+ .+.....+.+.+.+|-++.++++... | .|. .+..+.|..+... T Consensus 80 ~p~~~~-----~a~~v~~~l~~~~------~~~~~~~~ldai~~G~s~~Eivw~~~~g~~~p~~~~d~~~~~~~~~~r~~ 148 (446) T protein:vir:98 80 QHGDKR-----IKKFIDDQLRNRA------KTWISHCVKSIMTYGFSLSEQIYAHGARDNMPATVLDDIVNYHPLQVMLI 148 (446) T ss_pred cCccHH-----HHHHHHHHHhhcC------chhHHHHHHHHHhhCceeeeEEEeecccccccchhhccccccccccceee Confidence 753211 1112233332221 23444446788899999999987432 1 121 1122223222222 Q ss_pred EcCCCcEEEE--------------------------EEeeCCeeEEechhheeeeccCCCC-ccccccHHHHHHHHHHHH Q lcl|Aclame:pro 142 VHPTTGMLWY--------------------------QTVLNGKAIELYDYEVLHFKGLSTD-GIHGKSPIGVVREHIGAQ 194 (416) Q Consensus 142 ~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~vih~~~~~~~-~~~G~s~~~~~~~~i~~~ 194 (416) .+.++..... .....+..+.+|...++++++.... ..+|.|.+..|.-..-.. T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~iP~~kfi~~~~~~~~~~p~G~gLlr~~~w~~~fK 228 (446) T protein:vir:98 149 ANDNGRIVDGDTVTASQYKSGYWVPLPPYRIGDPPKKVDVVGSHVRLPSHKRLFINYNTKGNNPWGTSCLTSVLDYSIFK 228 (446) T ss_pred eccCCccccccccchhhcccccccCcccchhhhhhhhcccCcccccccccceEEEEecCCCCCccccchHHHHHHHHHHH Confidence 2222221100 0011223456788888888876554 579999999999999999 Q ss_pred HHHHHHHHHHHhccCCcceeeccCCcCCHHHH---------H----HHHHHHHHhhcCC-cee---ecCCCceeEeccCC Q lcl|Aclame:pro 195 AAATKYNAKLYKNEATPRGILKVPAFLDEKPK---------E----NVRKEWKRVNKVE-NIA---IIDYGLEYQSISMP 257 (416) Q Consensus 195 ~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~---------~----~~~~~~~~~~~~~-~~~---vl~~g~~~~~~~~~ 257 (416) ....+....+.+..+.|--+.+.+...++++. + ++.+.+......+ .++ ++++|++++-++.. T Consensus 229 ~~~~~~w~~f~E~yG~P~~vGkyp~ga~~~~~~~~~~~~~~~~~~~~L~~av~~~~~da~~ii~~~~~P~g~eie~~ea~ 308 (446) T protein:vir:98 229 RAFRDMMLIALDRYGTPLIYVIVPPGNTGVVEEAPDGTEITTTIAEQAEDALRRLSTDSGLVLTQLSKEQPVQVGALTTG 308 (446) T ss_pred HhhHHHHHHHHhHcCCceeEEeecCCCCcccccchhHHHHHHHHHHHHHHHHHhccccceeeeecccCCCCceEEeeccc Confidence 99999999999999999888888654432211 1 2333333322222 222 34889988776543 Q ss_pred hh-hHHHHHHHHHHHHHHHHHhccchhhccccc--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccc-- Q lcl|Aclame:pro 258 LQ-EAQFVESMKFNKAQISMIYKVPLHKLNELD--KATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSG-- 332 (416) Q Consensus 258 ~~-d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~--~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~-- 332 (416) .. ...+.+..++..++|+.+.....-.++... .|+++-.+ .......+.+.-.+++|++.||+.|+.+.-.... T Consensus 309 ~~~~~~~~~~i~~~d~~IskaiLg~~Ltl~~~~~~~GS~ala~-vh~~V~~d~~~aDa~~i~~tln~~Li~~l~~lNf~~ 387 (446) T protein:vir:98 309 NNFSDSFERAISLCDNNMLMGMGIPNLLVQNRETTFGTGRASE-IQLELFDGKINSIFDTVIHAFTEQVIGNLIRLNFDP 387 (446) T ss_pred cCChhhHHHHHHHHHHHHHHHHhcccccccccccccchhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc Confidence 33 235788889999999999877655555332 24443333 3345566778889999999999988644321110 Q ss_pred ---------cchhhhhhhhhhccHHHHHHHHHHHHhCCCcCH---HHHHHHhCCCCCCCCC Q lcl|Aclame:pro 333 ---------HYVKFNIDSELRGDSKTQAEYLKTLHETGVLNK---DEIRELLERNPIENGD 381 (416) Q Consensus 333 ---------~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~---NE~R~~~gl~p~~ggd 381 (416) .+++|++. ...|.+..+++..++++.|..++ +.+|+.+|+|+-+..- T Consensus 388 ~~~~~~~~~~~~~~~~~--e~eDl~~~a~~~~~L~~~G~~~p~~~~~ire~~giP~~~~~~ 446 (446) T protein:vir:98 388 ALYPLASNTGYITRLPG--RATDLAALVEAIKQMHDMGFLVDGDKDHIRSITGLPDAISST 446 (446) T ss_pred cccccccccccceeccC--ChhhHHHHHHHHHHHHhCCccccccHHHHHHHhCcCCCCCCC Confidence 12333333 35688899999999999998765 5599999998642211 No 134 >protein:vir:101541 Length: 694 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958122;genbank:gi:41057668;genbank:GeneID:2716798 Probab=99.52 E-value=1.7e-14 Score=96.10 Aligned_cols=399 Identities=15% Similarity=0.120 Sum_probs=214.0 Q ss_pred Ccchhhhccccccccc--------cccchhHHHhhhcCccccccccc-cHHHHhccHHHHHHHHHHHHhhccCcceE-Ee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDH--------EDGFNNILLNMFGGRKTASGERV-SESNSLVQPDIFACVNVLSDDIAKLPIHT-YK 70 (416) Q Consensus 1 m~~~~~f~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~~~v~~~i~~ia~~ia~~~~~~-~~ 70 (416) --|.+.|.-+.....+ ...++...++..+...+...... ......+.|-+++|+..|+..+..- |.- .. T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~-w~~~~~ 144 (694) T protein:vir:10 66 LRLARQFEVDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRT-WGEAIG 144 (694) T ss_pred hhhhhhccccccCCCccccchhhhhhccCcccccchhhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcc-cceecc Confidence 6666777644333211 11111122222211111111111 1234457888999999999888765 522 21 Q ss_pred ecCCc-----------ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC---------------- Q lcl|Aclame:pro 71 RTDGG-----------IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS---------------- 123 (416) Q Consensus 71 ~~~~~-----------~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~---------------- 123 (416) ..++. .....+......|...-..+.-+..|.+.+.+..+ +|-+.+++.-.. T Consensus 145 ~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erl~V~~~l~eaik~aRl-fGGa~~~i~I~gdd~~l~~PL~~~~~~I 223 (694) T protein:vir:10 145 GTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQA-FGRAHPYFKIKGDDQIMDTPLVPRPYTV 223 (694) T ss_pred ccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccceEEEEEeecCccccccccccccccc Confidence 11100 00111112334454444444445555555555554 555555543221 Q ss_pred -CCcEEEEEeeccceEEEEEcC--------CCcEEEEEEeeCCeeEEechhheeeeccCC-C------CccccccHHHHH Q lcl|Aclame:pro 124 -HGYPEALFPLRPDYTNAYVHP--------TTGMLWYQTVLNGKAIELYDYEVLHFKGLS-T------DGIHGKSPIGVV 187 (416) Q Consensus 124 -~g~~~~l~~l~p~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-~------~~~~G~s~~~~~ 187 (416) .|....|.+++|.++.+...+ .+.+.+|.+. + .++-.+.++.+.... + ..+.|+|....+ T Consensus 224 ~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~--G--~~IH~SRL~~f~g~plPd~LKp~y~~~G~Sv~q~~ 299 (694) T protein:vir:10 224 PKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI--G--TEVHATRLHTIVSRPVGDMLKPTYSFAGISMTQLA 299 (694) T ss_pred cCcceeeeEeecccccccchhhhccchhhccCCCceEEEe--c--eEEeeeeEEEecCCCchhhhhcccccCcccHHHHH Confidence 345566999999988885432 2334445443 1 133344444443222 1 235699999999 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHH---HHHHHhhcCCceeecC-CCceeEeccCChhhHHH Q lcl|Aclame:pro 188 REHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVR---KEWKRVNKVENIAIID-YGLEYQSISMPLQEAQF 263 (416) Q Consensus 188 ~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~---~~~~~~~~~~~~~vl~-~g~~~~~~~~~~~d~~~ 263 (416) .+.+............+...-............+.......+. +.++...+..++.+++ ...+|.+.+.+...++ T Consensus 300 ~e~V~~~~rT~~~v~~Li~~~~v~~lk~dla~~L~~g~~~~l~~R~eli~~~Rsn~G~~llDk~~Eefeq~stslSGLd- 378 (694) T protein:vir:10 300 MPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALMPGANVDLSMRAELINRYRDNRNILFLDKATEEFFQFNTPLSGLD- 378 (694) T ss_pred HHHHHHHHHHHhHHHHHHHhhhhHHHHHHHHHhhcChhHHHHHHHHHHHHHhcCccceEEEecCCcceEEEecccCCHH- Confidence 9998888887777777765533222111111222222222233 3334455667788888 4789999887777555 Q ss_pred HHHHHHHHHHHHHHhccchhhcccccC-CCcccHHHHHHHHHH-------HHHHHHHHHHHHHHHHhhcCchhcccccch Q lcl|Aclame:pro 264 VESMKFNKAQISMIYKVPLHKLNELDK-ATFSNIEHQSIEYVR-------NTLQPWIVNFEQELNVKLFLDHDQKSGHYV 335 (416) Q Consensus 264 ~e~~~~~~~~Ia~~~gvp~~~lg~~~~-~~~s~~e~~~~~f~~-------~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~ 335 (416) +........||.+-+||...|-+... |=.++.|...++||. .-|+|.++.+-+.|-+..|... ...| T Consensus 379 -dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~i----dp~i 453 (694) T protein:vir:10 379 -ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAV----DPSI 453 (694) T ss_pred -HHHHHHHHHHHhhhcCchhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CCcc Confidence 66677888999999999887755443 333455555555554 4678888888777766665432 2357 Q ss_pred hhhhhhhhhccHHHHHHH-------HHHHHhCCCcCHHHHHHHhCCCCCC-------CCCeEeeccCccccccccccccc Q lcl|Aclame:pro 336 KFNIDSELRGDSKTQAEY-------LKTLHETGVLNKDEIRELLERNPIE-------NGDKYISSLNYVFLDFLEEYQRL 401 (416) Q Consensus 336 ~f~~~~l~~~d~~~~~~~-------~~~~~~~g~~t~NE~R~~~gl~p~~-------ggd~~~~~~n~~~~~~~~~~~~~ 401 (416) .|.++.|...+.++++++ ...+++.|+++++|+|.++.-+|-- -.|.+-+|....--+.....+. T Consensus 454 ~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~~d~p~~~~~~~~~~~~~~~~~- 532 (694) T protein:vir:10 454 KWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGVPADDDIDGVLTYVQR- 532 (694) T ss_pred eEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCcccccccccccCCCcCccchhhhhHhhhcC- Confidence 777778877777766644 4566788999999999998777531 1233333322110000111111 Q ss_pred cCCcccCCCCccCCC Q lcl|Aclame:pro 402 KAGGAMKGGDNKNEG 416 (416) Q Consensus 402 ~~~~~~~gge~~~~~ 416 (416) ..+|+|...-| T Consensus 533 ----~~~~~~~~~~~ 543 (694) T protein:vir:10 533 ----LAEGGDTGAPG 543 (694) T ss_pred ----cccccccCCCC Confidence 11111111111 No 135 >protein:vir:78589 Length: 695 # NCBI annotation: NUDIX hydrolase # Family: family:all:297 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294854;genbank:gi:149882917;genbank:GeneID:5291060 Probab=99.48 E-value=9.2e-14 Score=92.06 Aligned_cols=399 Identities=15% Similarity=0.123 Sum_probs=213.1 Q ss_pred Ccchhhhcccccccccc-c-------cchhHHHhhhcCccccccccc-cHHHHhccHHHHHHHHHHHHhhccCcceE-Ee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHE-D-------GFNNILLNMFGGRKTASGERV-SESNSLVQPDIFACVNVLSDDIAKLPIHT-YK 70 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~~~v~~~i~~ia~~ia~~~~~~-~~ 70 (416) .-|-+.|+.+.....+. . .++...++..+...+...... ......+.|-+++|+..|+..+..- |.- .. T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~-w~~~~~ 145 (695) T protein:vir:78 67 LRLARQFEVDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRT-WGEAIG 145 (695) T ss_pred cccceeceeccccCCccccchhhhhhcccccccccchhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcc-cceecc Confidence 55666666432222111 1 111112222211111111111 1234457888999999999888665 522 21 Q ss_pred ecCCc-----------ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC---------------- Q lcl|Aclame:pro 71 RTDGG-----------IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS---------------- 123 (416) Q Consensus 71 ~~~~~-----------~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~---------------- 123 (416) ..++. .....+......|...-..+.-+..|.+.+.+..+ +|-+.+++.-.. T Consensus 146 ~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erL~V~~~l~eaik~aRl-fGGa~~~i~i~gdd~~l~~PL~~~~~~I 224 (695) T protein:vir:78 146 GTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQA-FGRAHPYFKIKGDDQIMDTPLVPRPYTV 224 (695) T ss_pred ccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccceEEEEEeccCccccccccccccccc Confidence 11100 00111112334454444444445555555555554 555555543222 Q ss_pred -CCcEEEEEeeccceEEEEEcC--------CCcEEEEEEeeCCeeEEechhheeeeccCC-C------CccccccHHHHH Q lcl|Aclame:pro 124 -HGYPEALFPLRPDYTNAYVHP--------TTGMLWYQTVLNGKAIELYDYEVLHFKGLS-T------DGIHGKSPIGVV 187 (416) Q Consensus 124 -~g~~~~l~~l~p~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-~------~~~~G~s~~~~~ 187 (416) .|....|.+++|.++.+...+ .+.+.+|.+. + .++-.+.++.+.... + ..+.|+|....+ T Consensus 225 ~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~--G--~kIH~SRL~~f~g~plPd~LKp~y~~~GiSv~q~~ 300 (695) T protein:vir:78 225 PKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI--G--TEVHATRLHTIVSRPVGDMLKPTYSFAGISMTQLA 300 (695) T ss_pred cCcceeeeEeecccccccchhhhccchhhccCCCceEEEe--c--eEEeeeeEEEecCCCchhhhhcccccCcccHHHHH Confidence 345566999999988885432 2334445443 1 133344444443222 1 235699999999 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHH---HHHHHhhcCCceeecC-CCceeEeccCChhhHHH Q lcl|Aclame:pro 188 REHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVR---KEWKRVNKVENIAIID-YGLEYQSISMPLQEAQF 263 (416) Q Consensus 188 ~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~---~~~~~~~~~~~~~vl~-~g~~~~~~~~~~~d~~~ 263 (416) .+.+............+...-............+.......+. +.++...+..++.+++ ...+|.+.+.+...++ T Consensus 301 ~e~V~~~~rT~~~v~~Li~~~~v~~lk~dla~~L~~g~~~~l~~R~eli~~~Rsn~G~~llDk~~Eefeq~stslSGLd- 379 (695) T protein:vir:78 301 MPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALMPGANVDLSMRAELINRYRDNRNILFLDKATEEFFQFNTPLSGLD- 379 (695) T ss_pred HHHHHHHHHHHhHHHHHHHhhhhHHHHHHHHHhhcChhHHHHHHHHHHHHHhcCccceEEEecCCcceEEEecccCCHH- Confidence 9998888887777777765533222111111222222222233 3334455667788888 4789999887777555 Q ss_pred HHHHHHHHHHHHHHhccchhhcccccC-CCcccHHHHHHHHHH-------HHHHHHHHHHHHHHHHhhcCchhcccccch Q lcl|Aclame:pro 264 VESMKFNKAQISMIYKVPLHKLNELDK-ATFSNIEHQSIEYVR-------NTLQPWIVNFEQELNVKLFLDHDQKSGHYV 335 (416) Q Consensus 264 ~e~~~~~~~~Ia~~~gvp~~~lg~~~~-~~~s~~e~~~~~f~~-------~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~ 335 (416) +........||.+-+||...|-+... |=.++.|...++||. .-|+|.++.+-+.|-+..|... ...| T Consensus 380 -dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~i----dpdi 454 (695) T protein:vir:78 380 -ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAV----DPSI 454 (695) T ss_pred -HHHHHHHHHHHhhhcCchhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CCcc Confidence 66677888999999999887755444 333455555555554 4678888888777766665432 2347 Q ss_pred hhhhhhhhhccHHHHHHH-------HHHHHhCCCcCHHHHHHHhCCCCCC-------CCCeEeeccCccccccccccccc Q lcl|Aclame:pro 336 KFNIDSELRGDSKTQAEY-------LKTLHETGVLNKDEIRELLERNPIE-------NGDKYISSLNYVFLDFLEEYQRL 401 (416) Q Consensus 336 ~f~~~~l~~~d~~~~~~~-------~~~~~~~g~~t~NE~R~~~gl~p~~-------ggd~~~~~~n~~~~~~~~~~~~~ 401 (416) .|.++.|...+.++++++ ...+++.|+++++|+|.++.-+|-- -.|.+-+|....--+.....+. T Consensus 455 ~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~~d~p~~~~~~~~~~~~~~~~~- 533 (695) T protein:vir:78 455 KWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGVPADDDIDGVLTYVQR- 533 (695) T ss_pred eEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCcccccccccccCCCcCccchhhhhHhhhcC- Confidence 777778877777766644 4566788999999999998777531 1233333322110000111111 Q ss_pred cCCcccCCCCccCCC Q lcl|Aclame:pro 402 KAGGAMKGGDNKNEG 416 (416) Q Consensus 402 ~~~~~~~gge~~~~~ 416 (416) ..+|+|...-| T Consensus 534 ----~~~~~~~~~~~ 544 (695) T protein:vir:78 534 ----LAEGGDTGAPG 544 (695) T ss_pred ----cccccccCCCC Confidence 11111111111 No 136 >protein:vir:106716 Length: 698 # NCBI annotation: gp18 # Family: family:all:297 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944326;genbank:gi:38638625;genbank:GeneID:2657345 Probab=99.48 E-value=6.3e-14 Score=92.96 Aligned_cols=399 Identities=14% Similarity=0.092 Sum_probs=213.5 Q ss_pred Ccchhhhcccccccccc-cc-------chhHHHhhhcCccccccccc-cHHHHhccHHHHHHHHHHHHhhccCcceE-Ee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHE-DG-------FNNILLNMFGGRKTASGERV-SESNSLVQPDIFACVNVLSDDIAKLPIHT-YK 70 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~-~~~~a~~~~~v~~~i~~ia~~ia~~~~~~-~~ 70 (416) .-|-+.|+.+.....+. .. ++...++..+...+...... ......+.|-+++|+..|+..+..- |.- .. T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~-w~~~~~ 145 (698) T protein:vir:10 67 LRLARQFEVDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRT-WGEAIG 145 (698) T ss_pred ccccccceeccccCCccccchhhhhhcccccccccchhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcc-cceecc Confidence 55666666443222211 11 11111222211111111111 1234457888999999999888765 522 21 Q ss_pred ecCCc-----------ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec----------------- Q lcl|Aclame:pro 71 RTDGG-----------IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG----------------- 122 (416) Q Consensus 71 ~~~~~-----------~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~----------------- 122 (416) ..++. .....+......|...-..+.-+..+.+.+.+..+ +|-+.+++.-. T Consensus 146 ~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erl~V~~~l~eai~~aRl-fGGa~~~i~I~gdd~~l~~PL~~~~~~I 224 (698) T protein:vir:10 146 GTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQA-FGRAHPYFKIKGDDQIMDTPLVPRPYTV 224 (698) T ss_pred ccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccceEEEEEeecCccccccccccccccc Confidence 11100 00111112334454444444445555565556655 55554444321 Q ss_pred CCCcEEEEEeeccceEEEEEcC--------CCcEEEEEEeeCCeeEEechhheeeeccCC-C------CccccccHHHHH Q lcl|Aclame:pro 123 SHGYPEALFPLRPDYTNAYVHP--------TTGMLWYQTVLNGKAIELYDYEVLHFKGLS-T------DGIHGKSPIGVV 187 (416) Q Consensus 123 ~~g~~~~l~~l~p~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-~------~~~~G~s~~~~~ 187 (416) ..|....|.+++|.++.+...+ .+.+.+|.+.. . ++-.+.++.+.... + ..+.|+|....+ T Consensus 225 ~kGslKGL~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~G--~--~IH~SRL~~~vg~pvpd~LKp~y~f~G~Sv~q~~ 300 (698) T protein:vir:10 225 PKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMIG--S--EVHATRLHTIVSRPVGDMLKPTYSFAGISMTQLA 300 (698) T ss_pred cCccceeeeeecccccccchhhhccchhhccCCCceEEEec--c--eecceeEEEecCCCchhhhcchhccCCccHHHHH Confidence 1344556999999988875432 23344454431 1 24444444444321 1 234699999999 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHH---HHHhhcCCceeecC-CCceeEeccCChhhHHH Q lcl|Aclame:pro 188 REHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKE---WKRVNKVENIAIID-YGLEYQSISMPLQEAQF 263 (416) Q Consensus 188 ~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~---~~~~~~~~~~~vl~-~g~~~~~~~~~~~d~~~ 263 (416) .+.+............+...-............++.....++..+ ++...+..++.+++ .+.+|.+.+.+...++ T Consensus 301 ~e~V~~~~rT~~~v~~Li~~~~~~~l~~dla~aL~~g~~~~l~~R~eli~~~Rsn~G~~llDk~~Eefeq~st~lSGLd- 379 (698) T protein:vir:10 301 MPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALTPGANVDLSMRAELINRYRDNRNILFLDKATEEFFQFNTPLSGLD- 379 (698) T ss_pred HHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHhcCChhhHHHHHHHHHHHHhcCccceEEEecCCcceEEEecCcCCHH- Confidence 999988888877777776553322221111222232233333333 33445566788888 5789999887777555 Q ss_pred HHHHHHHHHHHHHHhccchhhcccccC-CCcccHHHHHHHHHH-------HHHHHHHHHHHHHHHHhhcCchhcccccch Q lcl|Aclame:pro 264 VESMKFNKAQISMIYKVPLHKLNELDK-ATFSNIEHQSIEYVR-------NTLQPWIVNFEQELNVKLFLDHDQKSGHYV 335 (416) Q Consensus 264 ~e~~~~~~~~Ia~~~gvp~~~lg~~~~-~~~s~~e~~~~~f~~-------~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~ 335 (416) +........||.+-+||...|-+... |=.++-|...++||. .-|+|.++.+-+.|-+..|... ...| T Consensus 380 -dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~i----dp~i 454 (698) T protein:vir:10 380 -ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAV----DPSI 454 (698) T ss_pred -HHHHHHHHHHHhhhcCchhhhhccCCcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CCcc Confidence 66777888999999999887765444 333455555555554 4678888888777766655432 2357 Q ss_pred hhhhhhhhhccHHHHHHH-------HHHHHhCCCcCHHHHHHHhCCCCCCC----C---CeEeeccCccccccccccccc Q lcl|Aclame:pro 336 KFNIDSELRGDSKTQAEY-------LKTLHETGVLNKDEIRELLERNPIEN----G---DKYISSLNYVFLDFLEEYQRL 401 (416) Q Consensus 336 ~f~~~~l~~~d~~~~~~~-------~~~~~~~g~~t~NE~R~~~gl~p~~g----g---d~~~~~~n~~~~~~~~~~~~~ 401 (416) .|.++.|...+.++++++ ...+++.|+++++|+|.++.-+|.-+ . |++..|. ++..+.... T Consensus 455 ~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~d~~d~p~~~~-----~~~~~~~~~ 529 (698) T protein:vir:10 455 KWQWNALRELDDLEVAEARYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGAPA-----DDDIDGVLT 529 (698) T ss_pred eEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCccccccCCcccCCCCC-----CCcchHHHh Confidence 777788888887776654 45567889999999999987665311 1 2222222 111111100 Q ss_pred c-CCcccCC--CCccCCC Q lcl|Aclame:pro 402 K-AGGAMKG--GDNKNEG 416 (416) Q Consensus 402 ~-~~~~~~g--ge~~~~~ 416 (416) . ++...+| |++...+ T Consensus 530 ~~~~~~~~~~~~~~~~~~ 547 (698) T protein:vir:10 530 YVQRMAEGGDTGAPTAPG 547 (698) T ss_pred hhcCCcCCCCcccccccc Confidence 0 0111111 2211222 No 137 >protein:vir:3648 Length: 695 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705643;genbank:gi:23752328;genbank:GeneID:955749 Probab=99.46 E-value=1.4e-13 Score=91.10 Aligned_cols=399 Identities=15% Similarity=0.127 Sum_probs=212.1 Q ss_pred Ccchhhhccccccccccc--------cchhHHHhhhcCccccccccc-cHHHHhccHHHHHHHHHHHHhhccCcceE-Ee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHED--------GFNNILLNMFGGRKTASGERV-SESNSLVQPDIFACVNVLSDDIAKLPIHT-YK 70 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~~~v~~~i~~ia~~ia~~~~~~-~~ 70 (416) .-|-+.|+.+.....+.. .++...++..+...+...... ......+.|-+++|+..|+..+..- |.- .. T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~la~laQ~~eyr~~~~~ia~e~~R~-w~~~~~ 145 (695) T protein:vir:36 67 LRLARQFEVDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTLVLLAQLPEYRAMHEVLADECIRT-WGEAIG 145 (695) T ss_pred cccceeceecccccCccccchhhhhhcccccccccchhhhccCcchHHHHHHHhhccchhhHHHHHHHHhhcc-cceecc Confidence 666677764432222111 111122222211111111111 1234457888999999999888665 522 21 Q ss_pred ecCCc-----------ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC---------------- Q lcl|Aclame:pro 71 RTDGG-----------IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS---------------- 123 (416) Q Consensus 71 ~~~~~-----------~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~---------------- 123 (416) ..++. ..+..+......|...-..+.-+..|.+.+.+.. ++|-+.+++.-.. T Consensus 146 ~~~e~~~~~g~~~~~~~~~~~d~dqik~L~~e~erL~V~~~l~eaik~aR-lfGGa~~~i~i~gdd~~l~~PL~~~~~~I 224 (695) T protein:vir:36 146 GTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQ-AFGRAHPYFKIKGDDQIMDTPLVPRPYTV 224 (695) T ss_pred cchhhhhhccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccceEEEEEeccCccccccccccccccc Confidence 11100 0011111223344333333333444555555554 4565555553322 Q ss_pred -CCcEEEEEeeccceEEEEEcC--------CCcEEEEEEeeCCeeEEechhheeeeccCC-C------CccccccHHHHH Q lcl|Aclame:pro 124 -HGYPEALFPLRPDYTNAYVHP--------TTGMLWYQTVLNGKAIELYDYEVLHFKGLS-T------DGIHGKSPIGVV 187 (416) Q Consensus 124 -~g~~~~l~~l~p~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~vih~~~~~-~------~~~~G~s~~~~~ 187 (416) .|....|.+++|.++.+...+ .+.+.+|.+. + .++-.+.++.+.... + ..+.|+|....+ T Consensus 225 ~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V~--G--~kIH~SRL~~f~g~plPd~LKp~y~~~GiSv~q~~ 300 (695) T protein:vir:36 225 PKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWMI--G--TEVHATRLHTIVSRPVGDMLKPTYSFAGISMTQLA 300 (695) T ss_pred cCcceeeeEeecccccccchhhhccchhhccCCCceEEEe--c--eEEeeeeEEEecCCCchhhhhcccccCcccHHHHH Confidence 345566999999988885432 2334445443 1 133344444443222 1 235699999999 Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHH---HHHHHhhcCCceeecC-CCceeEeccCChhhHHH Q lcl|Aclame:pro 188 REHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVR---KEWKRVNKVENIAIID-YGLEYQSISMPLQEAQF 263 (416) Q Consensus 188 ~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~---~~~~~~~~~~~~~vl~-~g~~~~~~~~~~~d~~~ 263 (416) .+.+............+...-............+.......+. +.++...+..++.+++ ...+|.+.+.+...++ T Consensus 301 ~e~V~~~~rT~~~v~~Li~~~~v~~lk~dla~aL~~g~~~~l~~R~eli~~~Rsn~G~~llDk~~Eefeq~stslSGLd- 379 (695) T protein:vir:36 301 MPYIDNWLRTRQSVSDIVKQFSVSGILMDLAQALMPGANVDLSMRAELINRYRDNRNILFLDKATEEFFQFNTPLSGLD- 379 (695) T ss_pred HHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHhhcChhHHHHHHHHHHHHHhcCccceEEEecCCcceEEEecccCCHH- Confidence 9998888877777777765532221111111122222222233 3344455667788888 4789999887777555 Q ss_pred HHHHHHHHHHHHHHhccchhhcccccC-CCcccHHHHHHHHHH-------HHHHHHHHHHHHHHHHhhcCchhcccccch Q lcl|Aclame:pro 264 VESMKFNKAQISMIYKVPLHKLNELDK-ATFSNIEHQSIEYVR-------NTLQPWIVNFEQELNVKLFLDHDQKSGHYV 335 (416) Q Consensus 264 ~e~~~~~~~~Ia~~~gvp~~~lg~~~~-~~~s~~e~~~~~f~~-------~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~ 335 (416) +........||.+-+||...|-+... |=.++.|...++||. .-|+|.++.+-+.|-+..|... ...| T Consensus 380 -dVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G~i----dpdi 454 (695) T protein:vir:36 380 -ALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFGAV----DPSI 454 (695) T ss_pred -HHHHHHHHHHHhhhcCchhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CCcc Confidence 66677888999999999887755443 333455555555554 4678888888777766665432 2357 Q ss_pred hhhhhhhhhccHHHHHHH-------HHHHHhCCCcCHHHHHHHhCCCCCC-------CCCeEeeccCccccccccccccc Q lcl|Aclame:pro 336 KFNIDSELRGDSKTQAEY-------LKTLHETGVLNKDEIRELLERNPIE-------NGDKYISSLNYVFLDFLEEYQRL 401 (416) Q Consensus 336 ~f~~~~l~~~d~~~~~~~-------~~~~~~~g~~t~NE~R~~~gl~p~~-------ggd~~~~~~n~~~~~~~~~~~~~ 401 (416) .|.++.|...+.++++++ ...+++.|+++++|+|.++.-+|-- -.|.+-+|....--+.....+. T Consensus 455 ~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~~d~p~~~~~~~~~~~~~~~~~- 533 (695) T protein:vir:36 455 KWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGVPADDDIDGVLTYVQR- 533 (695) T ss_pred eEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCcccccccccccCCCcCccchhhhhHhhhcC- Confidence 777778877777766644 4566788999999999998777531 1233333322110000111111 Q ss_pred cCCcccCCCCccCCC Q lcl|Aclame:pro 402 KAGGAMKGGDNKNEG 416 (416) Q Consensus 402 ~~~~~~~gge~~~~~ 416 (416) ..+|+|...-| T Consensus 534 ----~~~~~~~~~~~ 544 (695) T protein:vir:36 534 ----LAEGGDTGAPG 544 (695) T ss_pred ----cccccccCCCC Confidence 11112211111 No 138 >protein:vir:105782 Length: 449 # NCBI annotation: gp5 # Family: family:all:6783 # MgeID: mge:1501 # MgeName: ES18 # Cross-refs: genbank:acc:YP_224143;genbank:gi:62362218;genbank:GeneID:3342535 Probab=99.44 E-value=1.4e-13 Score=91.02 Aligned_cols=381 Identities=10% Similarity=0.009 Sum_probs=178.2 Q ss_pred Ccchhhhcccccccccc-----ccchhHHHhhhcCccc-----cccccccHH----HHhccHHHHHHHHHHHHhhccCcc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHE-----DGFNNILLNMFGGRKT-----ASGERVSES----NSLVQPDIFACVNVLSDDIAKLPI 66 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~~-----~~~~~~~~~----~a~~~~~v~~~i~~ia~~ia~~~~ 66 (416) |==+=-|-......... +++-+...+.-..... .....++.+ .|-++..+..+|++++..+-.--. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~rd~l~~~~~glg~~r~~~~~~~g~~~~~~~~~l~~~Yr~~~ia~~iVd~~~d~~~~~~~ 80 (449) T protein:vir:10 1 MTDKLTLAVNHALNDARMARARMGLMVPTMGLDNKRHSAWCEYGFPELVTYENLYSLYRRGGIAHGAVEKLVGKCWQTNP 80 (449) T ss_pred CchhhHHHHhhhcchhHHHHHHHHHHHHHhcCCcccchhhhhcCCcccCCHHHHHHHHhcCchhHHHHHhhhhhhhhcCc Confidence 11000000000000000 0010100000000000 001123322 233467788999999986622211 Q ss_pred eEEeecCCcceeeeccc-hhhhhccccccccCHHHHHHHHH---HHHHHcCCeEEEEee-cC---------CCcEEEEEe Q lcl|Aclame:pro 67 HTYKRTDGGIERKPEHK-SAHAVYARPNPYMTAFTWKKLMM---THVLTWGNAYSYIQF-GS---------HGYPEALFP 132 (416) Q Consensus 67 ~~~~~~~~~~~~~~~~~-~~~~l~~~PN~~~s~~~f~~~~~---~~~l~~G~~~~~i~r-~~---------~g~~~~l~~ 132 (416) .+....+.. ..+.. .+.....+-+ ...+|..+. ....++|-+++++.- +. .+....+.| T Consensus 81 ~i~~g~~~~---~~~~~~~~e~~~~~l~----~~~~~~~l~ea~~~~rl~Gga~i~i~v~d~~~l~~Pl~~~~~i~~i~v 153 (449) T protein:vir:10 81 EIIEGDDAD---DSEDETSWEKKSKQVF----TNRLWRSFAEADRRRLVGRYAGILLHIRDEKDWNLPATKGRGLQKVSV 153 (449) T ss_pred ccccCcccc---chhhhHHHHHHHHHHH----HHHHHHHHHHHHHhhhccCcEEEEEEecCCCCCCcccccCcceeeEEe Confidence 222211111 11110 0011101000 113333322 223467877777643 32 123455666 Q ss_pred eccceEEEEE-------cCCCcEEEEEEeeC-----CeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHH-H Q lcl|Aclame:pro 133 LRPDYTNAYV-------HPTTGMLWYQTVLN-----GKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAAT-K 199 (416) Q Consensus 133 l~p~~v~~~~-------~~~~~~~~~~~~~~-----~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~-~ 199 (416) +....+++.. ...|.+.+|++... ...+.+-++.|+||... +..|.|.+..+.+.+-....+. . T Consensus 154 ~~~~~i~~~~~~~dp~sp~yg~P~~y~v~~~~~g~~~~~~~iH~SRl~~~~~~---~~~g~~~L~~~yn~l~~~~~~~~~ 230 (449) T protein:vir:10 154 SWAGSLKVAEWDTGINSKTYGQPKLWKYTERLPNGSSRRVDIHPDRVFILGDY---SEDAIGFLEPAYNAFVSLEKVEGG 230 (449) T ss_pred eccccCChhhhhcCCCCCCCCCceEEEEeeeccCCCccceeeccceeEeecCC---CCCChhHHHHHHHHhhhHHHhhhh Confidence 6554444321 12355666665432 23345667777777433 2347788888776553333322 2 Q ss_pred HHHHHHhccCC-----------cceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHH Q lcl|Aclame:pro 200 YNAKLYKNEAT-----------PRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMK 268 (416) Q Consensus 200 ~~~~~~~n~~~-----------~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~ 268 (416) +...++++..+ ..++....+...++..+++.+..+...++.+.+.++.+.+++.++.++.+.. +... T Consensus 231 ~a~~~l~~~~rq~~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~~~~~~sgl~--d~l~ 308 (449) T protein:vir:10 231 SGESFLKNAARQLNVNFEKEIDFTNLASLYGVSIDELQDKFNEVAGEINRGNDVLMTTQGATVTPLVTSVADPT--ATYN 308 (449) T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhHHhhCCchHHHHHHHHHHHHHhccchheeecCCcceEEEecccCChh--HHHH Confidence 22223332211 1111111122233444455544444444445667788888999988887655 5566 Q ss_pred HHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHH------HHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhh Q lcl|Aclame:pro 269 FNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRN------TLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSE 342 (416) Q Consensus 269 ~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~------~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l 342 (416) .....||.+-+||...|-+...+..+..++ .+.|+.. -|.|.++.+-+.|-+.-+... ...+.|.+++| T Consensus 309 ~~~q~iaaa~~IP~t~L~Gqsp~glnst~D-~~nyyd~i~~~Q~~l~p~le~l~~~l~~s~~g~~----~~d~~i~f~pL 383 (449) T protein:vir:10 309 VNLQTAAAGVDIPTRILIGNQQAERSSTED-QKYFNARCQSRRVDLSFEIEDFCDKLIELKIIDA----VAKKAVIWDDL 383 (449) T ss_pred HHHHHHHHHhCCCeeeeeccCccccccchh-HHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCC----CCceeEEeCCC Confidence 777889999999999887766654444443 3344432 255666665555544333211 12467777799 Q ss_pred hhccHHHHHH-------HHHHHHhCC---CcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCc Q lcl|Aclame:pro 343 LRGDSKTQAE-------YLKTLHETG---VLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDN 412 (416) Q Consensus 343 ~~~d~~~~~~-------~~~~~~~~g---~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~ 412 (416) ...+.+++++ ++++++++| +++.+|+|+.+|++|..+ +.+ +.+..++.+. .. T Consensus 384 ~~~t~kEkAei~k~~A~a~~~~~~ag~~~~~~~~EiR~~~~~~~~~~-~~~-------~~e~~de~~~----------~~ 445 (449) T protein:vir:10 384 NEQTGTEKLTNAKTMGEINQTMLGSGDNPAFSREEIRTAAGYDNDDE-EPL-------GEEDGDEEDK----------AT 445 (449) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHccccCCcCHHHHHHHhcccCCCC-CCC-------CCCCCccccc----------cC Confidence 8888888754 455566666 899999999999998643 211 1111111010 00 Q ss_pred cCCC Q lcl|Aclame:pro 413 KNEG 416 (416) Q Consensus 413 ~~~~ 416 (416) +... T Consensus 446 d~~a 449 (449) T protein:vir:10 446 DSAA 449 (449) T ss_pred CcCC Confidence 0111 No 139 >protein:vir:78161 Length: 355 # NCBI annotation: hypothetical protein # Family: family:all:2372 # MgeID: mge:1847 # MgeName: Min1 # Cross-refs: genbank:acc:YP_001294798;genbank:gi:149882819;genbank:GeneID:5309189 Probab=99.43 E-value=6.7e-13 Score=87.32 Aligned_cols=298 Identities=9% Similarity=-0.007 Sum_probs=173.5 Q ss_pred EEEEeecCC-C--cEEEEEeeccceEE-EEEcCCCcEEEEEEe--eCCeeEEechhheeeeccCCC-CccccccHHHHHH Q lcl|Aclame:pro 116 YSYIQFGSH-G--YPEALFPLRPDYTN-AYVHPTTGMLWYQTV--LNGKAIELYDYEVLHFKGLST-DGIHGKSPIGVVR 188 (416) Q Consensus 116 ~~~i~r~~~-g--~~~~l~~l~p~~v~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~vih~~~~~~-~~~~G~s~~~~~~ 188 (416) +.++++... | .|..|.+.++.++. ...+++++....... .+.+.+.+++...|+.++... ...+|.+.+..|. T Consensus 1 v~Eivw~~~~g~~~~~~l~~r~~~~~~~f~~~~~~~l~~~~~~~~~g~~~~~lp~~kfi~~~~~~~~g~p~G~gLlr~~~ 80 (355) T protein:vir:78 1 MFEQVYRIENGRARLGKLAWRPPRTISRFDVAPDGGLVAIEQWGVFGKATVRIPVDRLVVFVNEREGANWLGQSLLRQAY 80 (355) T ss_pred CeEEEEEeeCCeEEEeeeeecCccceeeeeeccCCceeEEEecCCCCCCcceeccCCEEEEEeCCCCCCccchhhHHHHH Confidence 666665433 3 46778888887554 445556655433322 233556788888877776544 4579999999999 Q ss_pred HHHHHHHHHHHHHHHHHhccCC--cceeeccCCcCCHHH-----------HHHHHHHHHHhhcC-CceeecCCCceeEec Q lcl|Aclame:pro 189 EHIGAQAAATKYNAKLYKNEAT--PRGILKVPAFLDEKP-----------KENVRKEWKRVNKV-ENIAIIDYGLEYQSI 254 (416) Q Consensus 189 ~~i~~~~~~~~~~~~~~~n~~~--~~~v~~~~~~~~~e~-----------~~~~~~~~~~~~~~-~~~~vl~~g~~~~~~ 254 (416) -..-.-....+....+.+..+. |-++.......+.++ .+.+.........+ ...+|++.|++++-+ T Consensus 81 w~~~fK~~~~~~w~~f~Er~g~g~p~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~i~~g~~a~~iip~g~~ie~~ 160 (355) T protein:vir:78 81 KNWLLKDRFLRIQALVGERNGLGVPIYQGAPLPEAIARDTARAEQWLNDQKEEGLQLAKEFRAGEAAGGYIPHGANFTLT 160 (355) T ss_pred HHHHHHHhhHHHHHHHHHHcCCCceEEEecCCCCcccchhhhHHHHHHHHHHHHHHHHHHhhCCcceeEeecCCceEEEe Confidence 9999999999999999998744 444444332222111 11222222222222 146789999998888 Q ss_pred cCChhhHHHHHHHHHHHHHHHHHhccchhhcc-cccC-CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcc-- Q lcl|Aclame:pro 255 SMPLQEAQFVESMKFNKAQISMIYKVPLHKLN-ELDK-ATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQK-- 330 (416) Q Consensus 255 ~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg-~~~~-~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~-- 330 (416) +.+....++.+..++..++|+.++--. .+-. ..++ |+++-. +....-....+.-.++.|++.||+.|+.+.-.. T Consensus 161 ea~g~~~~~~~~i~~~d~~Isk~iLGq-tlTs~~~~~gGS~Alg-~vh~~v~~~~~~aD~~~i~~~ln~~li~~l~~lN~ 238 (355) T protein:vir:78 161 GVQGKLPEMDGPIRYHDEQIARAVLAH-FLTLGGDKSTGSYALG-DTFASFFTGSLNAVMKHIADVTQQHVVEDLVDQNW 238 (355) T ss_pred ecCCCcccHHHHHHHHHHHHHHHHhhh-hhccccCCccchhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC Confidence 776666778888899999998887443 2222 2122 344433 334466677788899999999998876542111 Q ss_pred -c-ccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHH-----HHHHHhCCCCCCCCCeEeeccCc-ccccccccccccc Q lcl|Aclame:pro 331 -S-GHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKD-----EIRELLERNPIENGDKYISSLNY-VFLDFLEEYQRLK 402 (416) Q Consensus 331 -~-~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~N-----E~R~~~gl~p~~ggd~~~~~~n~-~~~~~~~~~~~~~ 402 (416) . ..+.+|.++... .+.+..++.+++++..|+..++ .+|+.+|+|+-+.+++...+..- .+..........+ T Consensus 239 ~~~~~~P~~~~~~~~-~~~~~~a~~~~~l~~~G~~~~~~~~~~~~~e~~gip~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (355) T protein:vir:78 239 GPEEPAPRLVPAQLG-KEQPVTAEAIRALVECGAFTADPELEKDLRARYGLPAPAERDDGADAAAAKAAGRRRAKRLPGQ 317 (355) T ss_pred CCCCCCCEEEecCcC-hhHHHHHHHHHHHHhCCCccccHHHHHHHHHHhCCCCCCCCCcccCCccccccccccccccCCc Confidence 1 112233343333 4556788999999999998764 47999999876566554433221 1111111000000 Q ss_pred C---CcccCCCCccCCC Q lcl|Aclame:pro 403 A---GGAMKGGDNKNEG 416 (416) Q Consensus 403 ~---~~~~~gge~~~~~ 416 (416) . ..+.+........ T Consensus 318 ~~~~~~~a~~~~a~~~~ 334 (355) T protein:vir:78 318 RQGAALPSRSPRADPPR 334 (355) T ss_pred cccccccccCCCCCChh Confidence 0 0000001111111 No 140 >protein:vir:106491 Length: 646 # NCBI annotation: Pas4 # Family: family:all:2798 # MgeID: mge:1680 # MgeName: phiAsp2 # Cross-refs: genbank:acc:YP_024790;genbank:gi:48697405;genbank:GeneID:2846148 Probab=99.18 E-value=1.4e-11 Score=80.17 Aligned_cols=405 Identities=11% Similarity=0.043 Sum_probs=216.1 Q ss_pred Ccchhhhccccccccccccch---hHHHhhh----cCc---------cccccccccHHHHh-ccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFN---NILLNMF----GGR---------KTASGERVSESNSL-VQPDIFACVNVLSDDIAK 63 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~---~~~~~~~----~~~---------~~~~~~~~~~~~a~-~~~~v~~~i~~ia~~ia~ 63 (416) |-|.| .|+....+..... ..+..+- .+. .......-. -.++ ..|.++-.+..|++.+|+ T Consensus 1 ~~~~r---Pk~~p~~p~~~~~arrr~LtaAsa~l~~~~~~~~kt~~~~~~~WQ~eA-W~~~d~vpELry~vgW~~~a~SR 76 (646) T protein:vir:10 1 MALLK---PKSAPPEPFGAEVARRIALAGATAQVDLGASSSWKTWKFGNKDWQTEG-WRLYDIIPEHHFLAGRIGDSVAQ 76 (646) T ss_pred CcccC---CCCCCCCcccccccchhhhhhccccccCCCcceeecCCCcchhhhHHH-HHHHhhhhhHhhHhhhhhhhhce Confidence 65443 3322221110000 0010000 000 000111111 1223 347788889999999999 Q ss_pred CcceEEeecCCcce--eeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEe---ecCCCcEEEEEeeccceE Q lcl|Aclame:pro 64 LPIHTYKRTDGGIE--RKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQ---FGSHGYPEALFPLRPDYT 138 (416) Q Consensus 64 ~~~~~~~~~~~~~~--~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~---r~~~g~~~~l~~l~p~~v 138 (416) +.+..-+.++.|.. ...+++........--.-.-..++++.+..++-+-|++|++.. ....+--..++++....| T Consensus 77 ~rL~aseiddtG~~tg~v~~~~v~~iv~~~~Gg~~gQ~qlLkr~~~~ltV~GE~wiv~~~~~~~~~~~~~~W~vvt~~Ev 156 (646) T protein:vir:10 77 ARLYVTEVDDTGEETGEVQDERIKRLAAVPLGTGSQRDDNLRLAGLDLAVGGECWIVGEGAATSPEAAEGSWFVVTGSAI 156 (646) T ss_pred eeeeeeeecCCCCCcCccchHHHHHHhhhhccchhhHHHHHHHHHhheecccceEEeeccccCCCCCCccceeeecHHHh Confidence 99999888765532 1122333333322222333467899999999999999999851 111122234666666655 Q ss_pred EEEEcCCCcEEEEEEe--eCCeeEEechhheeeeccCCC---CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcce Q lcl|Aclame:pro 139 NAYVHPTTGMLWYQTV--LNGKAIELYDYEVLHFKGLST---DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRG 213 (416) Q Consensus 139 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~vih~~~~~~---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~ 213 (416) .. .+++.....-. .+...+.++..++ .||-..+ ....--||+.++.+.+....-..+...+..+.-.+-.| T Consensus 157 ~~---tg~~~~i~~p~~~~g~~~v~~~~~d~-lvRiW~P~Prr~~epDSpvra~l~~l~Ei~~lt~~I~aaakSRL~GnG 232 (646) T protein:vir:10 157 SR---TGDEIAVRRPQQRGGSKLVLVDGQDI-LIRCWRPHPNDTDQADSFTRSAIVPLREIELLTKREFAELDSRLTGAG 232 (646) T ss_pred cc---CCCeeeeecCccCCCCCcceecCCce-EEEEecCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHHHHHhcCc Confidence 32 12222111111 1223344555555 4453222 24567899999999999888888888888888777778 Q ss_pred eeccCCcCC-------HHHHHHHHHHHHHhh------cCC---c-eeecC--CC-----ceeEeccCChh-hHHHHHHHH Q lcl|Aclame:pro 214 ILKVPAFLD-------EKPKENVRKEWKRVN------KVE---N-IAIID--YG-----LEYQSISMPLQ-EAQFVESMK 268 (416) Q Consensus 214 v~~~~~~~~-------~e~~~~~~~~~~~~~------~~~---~-~~vl~--~g-----~~~~~~~~~~~-d~~~~e~~~ 268 (416) |+-++..++ +-....+.+.|.+.. .+. - ++|+. +. .+++.+.+... +...+..|+ T Consensus 233 vLfvP~e~s~p~~~~~~a~~~~l~~~l~qaa~tAi~De~S~aA~vPiia~~P~E~i~~~~~ik~l~f~~eite~aiktR~ 312 (646) T protein:vir:10 233 IMFLPEGVDFPRGEEDPAGLAGFMAYLQRAAAASMADQSRASAMVPIMATIPNEMMEHLDKIKPLTFWSELSAEITPMKD 312 (646) T ss_pred eeeeccccccCCCCCCCcchhHHHHHHHHHHHhhhcCCCCccceeeeEEeeChHHHhhhhcceeeccCchhhHHHhhhHH Confidence 887765442 233445555544321 111 1 22322 11 13443444222 334578899 Q ss_pred HHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccc------cchhhhhhhh Q lcl|Aclame:pro 269 FNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSG------HYVKFNIDSE 342 (416) Q Consensus 269 ~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~------~~~~f~~~~l 342 (416) ..++.||...-|||+.|-++.++|-=+.=+....-++ -|.|.+..|++.|++.+|.+.-...| |-++||.+.| T Consensus 313 daI~RlA~glDIppE~LLGlgd~NHWtAWqI~de~vr-HI~P~l~~ic~AlT~~~Lrp~Le~eGi~dp~kyvvW~DaS~L 391 (646) T protein:vir:10 313 KAIARLASSAEIPGEVLTGIGDANHWTAWLISDEGIR-WIRGYLGLIADALTRGFLRRALESMGVTNPERYAFAFDTSTL 391 (646) T ss_pred HHHHHHHhccCCchhheeeccccceeeeeeeccccch-hhhhHHHHHHHHHHhhHHHHHHHHcCCCChhHeEEeecCccc Confidence 9999999999999999877766542111111112233 49999999999999998755433333 5789999887 Q ss_pred hhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCe------------------EeeccCccccccccccc-cccC Q lcl|Aclame:pro 343 LRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDK------------------YISSLNYVFLDFLEEYQ-RLKA 403 (416) Q Consensus 343 ~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~------------------~~~~~n~~~~~~~~~~~-~~~~ 403 (416) ... -.+.+.+..+.+.|.+|-...|+.+|+.-.++-+. +..|.-..+++.+.-+. .... T Consensus 392 t~~--pd~~deA~qa~drGAIt~eAlrk~~Gf~~dd~pt~~E~~~~~~~~~v~~~P~Lil~P~~qa~~~~P~~~~~~lpp 469 (646) T protein:vir:10 392 ASK--PNRLDEAIQLHERNLIKDEEVVKAGAFSVDQMPTVQERAVQILLGLVKTQPDLILDPAIQAALGLPAVQSVGLPP 469 (646) T ss_pred ccC--CCCcHHHHHHHHcCCccHHHHHHHhcccccccCChHHHHHHHHHHHhcCCccccccchhhccccCCCcCccccCC Confidence 432 23334566788999999999999999975432211 01111111222211000 0000 Q ss_pred Cc--ccCCC--CccCCC Q lcl|Aclame:pro 404 GG--AMKGG--DNKNEG 416 (416) Q Consensus 404 ~~--~~~gg--e~~~~~ 416 (416) +. ..+|+ +.+.+| T Consensus 470 ~~~~~~dg~~~~~e~~g 486 (646) T protein:vir:10 470 TAAQRTDGDLDDDESEG 486 (646) T ss_pred cccccccCCCCChhhcC Confidence 00 11111 111111 No 141 >protein:vir:102426 Length: 631 # NCBI annotation: gp11 # Family: family:all:2798 # MgeID: mge:1618 # MgeName: Pipefish # Cross-refs: genbank:acc:YP_655288;genbank:gi:109521851;genbank:GeneID:4157741 Probab=99.11 E-value=1.3e-11 Score=80.22 Aligned_cols=408 Identities=14% Similarity=0.087 Sum_probs=215.8 Q ss_pred Ccchhhhcccccccccc----ccc---hhHHHhhhcCcccc-ccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeec Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHE----DGF---NNILLNMFGGRKTA-SGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRT 72 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~----~~~---~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 72 (416) =+.+|-|+.....+..- ... ...+... .+.+.. ....-..+-+-..+.++-.+..|++.++++.+..-..+ T Consensus 8 r~~rrpkg~~~a~~r~L~aAs~~~~dpg~~~~~~-~g~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~rL~as~id 86 (631) T protein:vir:10 8 RLVRRPKGGRPAPSRALTAASQPLPDPSQVFSKS-TGISRNSDWQTDAWEAVDLVGELRYYVGWRASSCSRCRLVASELD 86 (631) T ss_pred eeeecCCCCCccchhhhhhhhccccchhhhhhhh-cCCcccchhhHHHHHHHHhhhhHHHHhhhhhhhhceeeeEeeeec Confidence 12222232111111100 000 0000000 010000 01111112222347788899999999999999998887 Q ss_pred CC-----cceee--eccch-hhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEe-ecCCC---c-------EEEEEee Q lcl|Aclame:pro 73 DG-----GIERK--PEHKS-AHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQ-FGSHG---Y-------PEALFPL 133 (416) Q Consensus 73 ~~-----~~~~~--~~~~~-~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~-r~~~g---~-------~~~l~~l 133 (416) .+ |..++ .++.. ......=+--.+...++++.+..++-+-|++|+++. |...| + ..+++++ T Consensus 87 pDtg~ptg~iee~~~~~~~v~~~~~~i~gG~lgQ~~llkrl~~~ltV~GE~wiv~l~~p~~~~~~~pd~~~r~~~~W~~v 166 (631) T protein:vir:10 87 ENTGLPTGGISEDNTEGERVREIVSKIADGTLGQAALTKRVVECLTVPGELWIVILTRPVKGAPAQPDGSVRTRQEWYAV 166 (631) T ss_pred cCCCCCccccccCCchhHHHHHHHHhcCCCcchHHHHHHHHHhheecccceEEEEEeccCcCCCCCcccccccccceeec Confidence 55 22221 11122 222323455667899999999999999999999984 33322 1 2356666 Q ss_pred ccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeecc--CCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCC Q lcl|Aclame:pro 134 RPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKG--LST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEAT 210 (416) Q Consensus 134 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~--~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~ 210 (416) ....++.....++- -+.... +....|-.+.=+.||- +.+ ....--||+.++.+.+....-..+...+..+.-.+ T Consensus 167 t~~ei~~~~~g~g~--~v~lp~-g~~h~~~~~~D~l~RiW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i~aaakSRl~ 243 (631) T protein:vir:10 167 SKEEIKKSNKGSGT--NIVLPT-GEEHEFVKGTDIIFRVWIPKPRKASEPDSPVRAVLDSIREIVRTTKTIANASKSRLI 243 (631) T ss_pred cHHHHhcccCcccc--eeecCC-CCccceecCCceEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHHHHHHh Confidence 66655433222211 122222 2222222221244442 222 34567899999999998888888888888877777 Q ss_pred cceeeccCCcCC---------------------HHHHHHHHHHHHHhh------cCCc----eeec--C----CCceeEe Q lcl|Aclame:pro 211 PRGILKVPAFLD---------------------EKPKENVRKEWKRVN------KVEN----IAII--D----YGLEYQS 253 (416) Q Consensus 211 ~~~v~~~~~~~~---------------------~e~~~~~~~~~~~~~------~~~~----~~vl--~----~g~~~~~ 253 (416) -.|++.++..++ .-...++.+.+.+.. .+.. ++|+ + ++++... T Consensus 244 gnGvlflP~els~P~~~~~~~~~~g~~v~~~~g~pa~~~l~~~l~q~a~tai~De~S~aA~vPii~~~p~E~i~~i~hlk 323 (631) T protein:vir:10 244 GNGVLFVPHEMSLPAAQGPVSEVEGEEIAPLVGEPAVQQLTDMLFQVAETAVEDEDSQAAFIPVIAGVPGEQIKDVKHIR 323 (631) T ss_pred hCceeEeccccccCCCCCCCCCcCCccCCccccchhHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHHhcCeeEEe Confidence 777776665432 124445555443221 1111 2222 1 2334444 Q ss_pred ccCChhhHHHHHHHHHHHHHHHHHhccchhhccccc-CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcc-- Q lcl|Aclame:pro 254 ISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELD-KATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQK-- 330 (416) Q Consensus 254 ~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~-~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~-- 330 (416) +.....+ ..+..|+..++.||...-|||+.|-+++ ++|-=+.=+....-++--|.|.+..|++.|++.+|.+.-.. T Consensus 324 f~~ei~e-~aiktR~daI~RlA~glDi~pE~LLGlGsd~NHWsAWqI~dedVrlHI~P~l~lic~AlT~q~Lrp~Le~eG 402 (631) T protein:vir:10 324 FDNEITE-VAIKTRNDAIARLAMGLDVSPERLLGLGSQTNHWSAWQISDEDVQLHIAPVMEIFCQALTDQILRVTLAREG 402 (631) T ss_pred ecCchhH-HHHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchHHHHHHHHHHhhHHHHHHHHhC Confidence 4433333 4468899999999999999999887663 44311111111223455699999999999999887543332 Q ss_pred ---cccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC------------------eEeeccCc Q lcl|Aclame:pro 331 ---SGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD------------------KYISSLNY 389 (416) Q Consensus 331 ---~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd------------------~~~~~~n~ 389 (416) ..|-++||.+.|... -.+.+.+..+.+.|.+|-...|+.+|+.-..+-| .-+.| ++ T Consensus 403 vDp~kYvvW~DaS~Lt~d--Pdr~deA~qa~drGAIt~eAlrk~lGf~eDd~yd~~t~e~~~~~a~~av~~dpaLip-~l 479 (631) T protein:vir:10 403 IDPSKYVVWYDPSQLTID--PDKSDEAKFAYENGAINGEALRKYLGLGDDAGYDFTTREGWVMWAQDAVSKDPTLIP-ML 479 (631) T ss_pred CCHHHhEeeecCcccccC--CCCcHHHHHHHHcCCcCHHHHHHHhcCchhcccCcCchHHHHHHHHHHhhcccCcch-hh Confidence 246788898887432 2333456678899999999999999998754433 11111 22 Q ss_pred ccc--ccccccccccCCccc-CCCCccCCC Q lcl|Aclame:pro 390 VFL--DFLEEYQRLKAGGAM-KGGDNKNEG 416 (416) Q Consensus 390 ~~~--~~~~~~~~~~~~~~~-~gge~~~~~ 416 (416) .|+ +......-+.++... .|.|+++++ T Consensus 480 Apl~~~~~~~v~~P~~~a~~~~g~ed~~~~ 509 (631) T protein:vir:10 480 APLIAGVLKQIEFPQQQAIDSGGNEDTSDA 509 (631) T ss_pred HHHHHHHhhhccCCCCCCCCCCCCCccccc Confidence 221 100011111111111 111111111 No 142 >protein:vir:8654 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:156 # MgeName: Rosebush # Cross-refs: genbank:acc:NP_817773;genbank:gi:29566205;genbank:GeneID:1259465 Probab=99.06 E-value=3.3e-11 Score=78.03 Aligned_cols=406 Identities=12% Similarity=0.074 Sum_probs=213.0 Q ss_pred Ccch--hhhcccccccccccc------chh-------HHHhhhcCccccccccccHHHHhc-cHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MLLE--RMFEKRSGSSDHEDG------FNN-------ILLNMFGGRKTASGERVSESNSLV-QPDIFACVNVLSDDIAKL 64 (416) Q Consensus 1 m~~~--~~f~~~~~~~~~~~~------~~~-------~~~~~~~~~~~~~~~~~~~~~a~~-~~~v~~~i~~ia~~ia~~ 64 (416) |--. |+.+ |.+...+... ... .+....++..-.....-. -.++. .+.++-.+..|++.++++ T Consensus 1 ma~~~lr~~r-rpk~~p~~~r~~al~aas~~i~~p~~~~~ks~~~~~~~~WQ~eA-W~~~d~v~Elry~vgW~~~s~Sr~ 78 (629) T protein:vir:86 1 MAPTSLRIVR-RPKSEPVSTRQRALVAASQPVENPGKAFRKAMGSSTRTDWQEDA-WKAYDAVGELRYYVGWRSSSASRV 78 (629) T ss_pred CCccceeeee-cCCCCChhhhhhhhhhhhhccccccchhhhhcCCCchhhhhHHH-HHHHHhhhhHHHHhhhhhhhhcee Confidence 4322 2222 1112221111 000 001110000000011111 12333 677888899999999999 Q ss_pred cceEEeecCCccee--eecc--ch---hhhhccccc-cccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcE-------EE Q lcl|Aclame:pro 65 PIHTYKRTDGGIER--KPEH--KS---AHAVYARPN-PYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYP-------EA 129 (416) Q Consensus 65 ~~~~~~~~~~~~~~--~~~~--~~---~~~l~~~PN-~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~-------~~ 129 (416) .+..-+.+.++..+ .+++ +. ...+-..+- -.+-..++++.+..++-+-|++|+++.....|.. .+ T Consensus 79 rL~as~idpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~~~e 158 (629) T protein:vir:86 79 RLIASAIDPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNPVPE 158 (629) T ss_pred eeEeeeecCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcchhh Confidence 99998888553221 1122 11 122222222 3345788999999999999999999974333332 34 Q ss_pred EEeeccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCCC---CccccccHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 130 LFPLRPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLST---DGIHGKSPIGVVREHIGAQAAATKYNAKLYK 206 (416) Q Consensus 130 l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 206 (416) ++.+-+..++- ..++.. ... ..+...+|-.+.=+.+|-..+ ....--||+.++.+.+....-..+...+..+ T Consensus 159 W~~vt~~ei~~---~~~~~~-i~l-P~g~~~e~~~~~d~l~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~lt~~i~aaak 233 (629) T protein:vir:86 159 WLALTPEEVRA---SEKKTI-IEL-PTGDKHEFRDGLDGMFRVWNPRARRAREPDSPVRANLDSLKEIVRTTKTIANASK 233 (629) T ss_pred heeechHHhhh---ccCcee-eEc-CCCCcceeeCCCceEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHHH Confidence 55555554441 222322 222 223333443333333663322 2456789999999988888888888877777 Q ss_pred ccCCcceeeccCCcCC----------------------HHHHHHHHHHHHHhh------cCCc----eeec--C----CC Q lcl|Aclame:pro 207 NEATPRGILKVPAFLD----------------------EKPKENVRKEWKRVN------KVEN----IAII--D----YG 248 (416) Q Consensus 207 n~~~~~~v~~~~~~~~----------------------~e~~~~~~~~~~~~~------~~~~----~~vl--~----~g 248 (416) .-.+-.|++.++..++ .-..+++.+.|.+.. .+.. ++|+ + ++ T Consensus 234 SRL~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia~~P~E~i~~ 313 (629) T protein:vir:86 234 SRLIGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFAAAPGELIKN 313 (629) T ss_pred HHHhhCceeeeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHHhcC Confidence 7666667755443221 113445666554321 1111 2222 2 23 Q ss_pred ceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhccccc-CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCch Q lcl|Aclame:pro 249 LEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELD-KATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDH 327 (416) Q Consensus 249 ~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~-~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~ 327 (416) ++...+.....+ ..+..|+..++.||...-|||+.|-+++ ++|-=+.=+....-++--|.|.+..|++.|++.+|.+. T Consensus 314 i~hlkf~~ei~e-~aiktR~daI~RlA~glDippE~LLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~AlT~~~Lrp~ 392 (629) T protein:vir:86 314 VTHLKFDNQVTE-VAIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVRLHILPPVEMLCEAITNQVLRTV 392 (629) T ss_pred eeEEeecCchhH-HHHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchHHHHHHHHHHhhHHHHH Confidence 344444433333 4468899999999999999999887663 44311111111223455699999999999999887543 Q ss_pred hcc-----cccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC-------------eEeeccCc Q lcl|Aclame:pro 328 DQK-----SGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD-------------KYISSLNY 389 (416) Q Consensus 328 ~~~-----~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd-------------~~~~~~n~ 389 (416) -.. ..|-++||.+.|... -.+.+.+..+.+.|.+|-...|+.+|+.-..+-| .+....++ T Consensus 393 Le~eGiDp~kYvvW~DaS~Lt~d--Pd~~deA~~a~drGAIt~eAlrk~lGf~eD~~yd~tt~E~~~~~a~d~V~~~P~L 470 (629) T protein:vir:86 393 LMREGIDPNAYVVWHDASQLTVD--PDKTDEARDAFDRGAITAEAMVKMLGLADDTVYDFTTPEGWAQWARDRVGQDPNL 470 (629) T ss_pred HHHhCCCHHHhEeeecCcccccC--CCCcHHHHHHHHcCCcCHHHHHHHhcCccccccCCCchHHHHHHHHHhhhhCcch Confidence 322 246788888887432 2333456678899999999999999998754432 11111111 Q ss_pred ----ccc----ccccccccccCC--cccCCCCccCCC Q lcl|Aclame:pro 390 ----VFL----DFLEEYQRLKAG--GAMKGGDNKNEG 416 (416) Q Consensus 390 ----~~~----~~~~~~~~~~~~--~~~~gge~~~~~ 416 (416) .++ ..+.-+.+..+. ....+|+.+.+| T Consensus 471 i~~~a~l~~~~a~~~~P~~~~~~pp~~e~~~~dE~sg 507 (629) T protein:vir:86 471 LPTLAVLIPELADVEFPTPTVALPPAEEQDGDEEASG 507 (629) T ss_pred hhhhhhhhhhhcccccCccCCCCCccccCCCcccccC Confidence 111 111111110000 111111111111 No 143 >protein:vir:99088 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:1608 # MgeName: Qyrzula # Cross-refs: genbank:acc:YP_655692;genbank:gi:109521770;genbank:GeneID:4157810 Probab=99.05 E-value=4e-11 Score=77.58 Aligned_cols=406 Identities=12% Similarity=0.069 Sum_probs=212.7 Q ss_pred Ccch--hhhcccccccccccc------chh-------HHHhhhcCccccccccccHHHHhc-cHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MLLE--RMFEKRSGSSDHEDG------FNN-------ILLNMFGGRKTASGERVSESNSLV-QPDIFACVNVLSDDIAKL 64 (416) Q Consensus 1 m~~~--~~f~~~~~~~~~~~~------~~~-------~~~~~~~~~~~~~~~~~~~~~a~~-~~~v~~~i~~ia~~ia~~ 64 (416) |--. |+.+ |.+...+... ... .+....++..-.....-. -.++. .+.++-.+..|++.++++ T Consensus 1 ma~~~lr~~r-rpk~~p~~~r~~al~aas~~i~~p~~~~~ks~~~~~~~~WQ~eA-W~~~d~v~Elry~vgW~~~s~Sr~ 78 (629) T protein:vir:99 1 MAPTSLRIVR-RPKSEPVSTRQRALVAASQPVENPGKAFRKAMGSSTRTDWQDDA-WKAYDAVGELRYYVGWRSSSASRV 78 (629) T ss_pred CCccceeeee-cCCCCChhhhhhhhhhhhhcccccchhhhhhcCCCchhhhhHHH-HHHHHhhhhHHHHhhhhhhhhcee Confidence 4322 2222 1111211111 000 011111110000011111 12333 677888999999999999 Q ss_pred cceEEeecCCccee--eecc--ch---hhhhccccc-cccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcE-------EE Q lcl|Aclame:pro 65 PIHTYKRTDGGIER--KPEH--KS---AHAVYARPN-PYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYP-------EA 129 (416) Q Consensus 65 ~~~~~~~~~~~~~~--~~~~--~~---~~~l~~~PN-~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~-------~~ 129 (416) .+..-+.+.++..+ .+++ +. ...+-..+- -.+-..++++.+..++-+-|++|+++.....|.. .+ T Consensus 79 rL~as~idpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~~~e 158 (629) T protein:vir:99 79 RLIASAIDPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNPVPE 158 (629) T ss_pred eeEeeeecCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcchhh Confidence 99998888553221 1122 11 122222222 3345788999999999999999999974333332 34 Q ss_pred EEeeccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCCC---CccccccHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 130 LFPLRPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLST---DGIHGKSPIGVVREHIGAQAAATKYNAKLYK 206 (416) Q Consensus 130 l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 206 (416) ++.+-+..++- ..++.. .....+..-+..+..+++ +|-..+ ....--||+.++.+.+....-..+...+..+ T Consensus 159 W~~vt~~ei~~---~~~~~~-i~lP~g~~~e~~~~~d~l-~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~lt~~i~aaak 233 (629) T protein:vir:99 159 WLALTPEEVRA---SEKKTI-IELPTGDKHEFRDGLDGM-FRVWNPRARRAREPDSPVRANLDSLKEIVRTTKTIANASK 233 (629) T ss_pred heeechHHhhh---ccCcee-EEcCCCCccceeCCCceE-EEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHHH Confidence 55555554441 222322 222222222333334433 663322 2456789999999988888888888877777 Q ss_pred ccCCcceeeccCCcCC----------------------HHHHHHHHHHHHHhh------cCCc----eeec--C----CC Q lcl|Aclame:pro 207 NEATPRGILKVPAFLD----------------------EKPKENVRKEWKRVN------KVEN----IAII--D----YG 248 (416) Q Consensus 207 n~~~~~~v~~~~~~~~----------------------~e~~~~~~~~~~~~~------~~~~----~~vl--~----~g 248 (416) .-.+-.|++.++..++ .-..+++.+.|.+.. .+.. ++|+ + ++ T Consensus 234 SRL~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia~~P~E~i~~ 313 (629) T protein:vir:99 234 SRLIGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFAAAPGELIKN 313 (629) T ss_pred HHHhhCceeEeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHHhcC Confidence 7666667755443221 113445666554321 1111 2222 1 23 Q ss_pred ceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhccccc-CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCch Q lcl|Aclame:pro 249 LEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELD-KATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDH 327 (416) Q Consensus 249 ~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~-~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~ 327 (416) ++...+.....+ ..+..|+..++.||...-|||+.|-+++ ++|-=+.=+....-++--|.|.+..|++.|++.+|.+. T Consensus 314 i~hlkf~~ei~e-~aiktR~daI~RlA~glDippE~LLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~AlT~~~Lrp~ 392 (629) T protein:vir:99 314 VTHLKFDNQVTE-VAIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVRLHILPPVEMLCEAITNQVLRTV 392 (629) T ss_pred eeEEeecCchhH-HHHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchhHHHHHHHHHhhHHHHH Confidence 344444433333 4468899999999999999999887663 44311111111223455699999999999999887543 Q ss_pred hcc-----cccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC-------------eEeeccCc Q lcl|Aclame:pro 328 DQK-----SGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD-------------KYISSLNY 389 (416) Q Consensus 328 ~~~-----~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd-------------~~~~~~n~ 389 (416) -.. ..|-++||.+.|... -.+.+.+..+.+.|.+|-...|+.+|+.-..+-| .+....++ T Consensus 393 Le~eGiDp~kYvvW~DaS~Lt~d--Pd~~deA~~a~drGAIt~eAlrk~lGf~eD~~yd~tt~E~~~~~a~d~V~~~P~L 470 (629) T protein:vir:99 393 LMREGIDPNAYVVWHDASQLTVD--PDKTDEARDAFDRGAITAEAMVKMLGLADDTVYDFTTPEGWAQWARDRVGQDPNL 470 (629) T ss_pred HHHhCCCHHHhEeeecCcccccC--CCCcHHHHHHHHcCCccHHHHHHHhcCccccccCCCchHHHHHHHHHhhhhCcch Confidence 322 246788888887432 2333456678899999999999999998754432 11111111 Q ss_pred ----ccc----ccccccccccCC--cccCCCCccCCC Q lcl|Aclame:pro 390 ----VFL----DFLEEYQRLKAG--GAMKGGDNKNEG 416 (416) Q Consensus 390 ----~~~----~~~~~~~~~~~~--~~~~gge~~~~~ 416 (416) .++ ..+.-+.+..+. ....+|+.+.+| T Consensus 471 i~~~a~l~~~~a~~~~P~~~~~~pp~~e~~~~dE~sg 507 (629) T protein:vir:99 471 LPTLAVLIPELADVEFPTPTVALPPAEEQDGDEEASG 507 (629) T ss_pred hhhhhhhhhhhcccccCccCCCCCccccCCCcccccC Confidence 111 111111111000 111111111111 No 144 >protein:vir:98444 Length: 434 # NCBI annotation: hypothetical protein # Family: family:all:5096 # MgeID: mge:1589 # MgeName: VWB # Cross-refs: genbank:acc:NP_958276;genbank:gi:41057250;genbank:GeneID:2732828 Probab=98.98 E-value=1.2e-09 Score=69.55 Aligned_cols=366 Identities=10% Similarity=0.038 Sum_probs=174.8 Q ss_pred hhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHH Q lcl|Aclame:pro 27 MFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMM 106 (416) Q Consensus 27 ~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~ 106 (416) +........... ...-....+..-+|+.++..+--..|.+ .+.. .+..+ ..++.+ | ........+. T Consensus 1 ~l~~~~~~~~~~--~~~~~v~n~~~~ivd~~~~~l~~~gf~~---~d~~----~~~~~-~~i~~~-N---~~d~~~~~~~ 66 (434) T protein:vir:98 1 MLPKNAEQAFLD--FQRKARTNFCGLIANASVHRLLALGVTG---PDGE----PDTRA-SRWWQA-N---RLDSRQKLVW 66 (434) T ss_pred CCCCCccHHHHH--hhhhhhccchHHHHHHHHhhhccCceec---CCCc----hHHHH-HHHHHh-c---ChhHHHHHHH Confidence 111000000000 0001123456677887777554333332 1111 11122 223333 2 2345777888 Q ss_pred HHHHHcCCeEEEEeecCCCcE------EEEEeeccceEEEEEcCCCcEE-----EEEEeeCCee---E------------ Q lcl|Aclame:pro 107 THVLTWGNAYSYIQFGSHGYP------EALFPLRPDYTNAYVHPTTGML-----WYQTVLNGKA---I------------ 160 (416) Q Consensus 107 ~~~l~~G~~~~~i~r~~~g~~------~~l~~l~p~~v~~~~~~~~~~~-----~~~~~~~~~~---~------------ 160 (416) .+++.+|++|.++.++..+.. ..+..++|.++.+.+++..+.. ++.....+.. + T Consensus 67 ~~a~i~G~ay~~v~~~~~~~~~~~~~~~~I~~~~p~~~~~i~D~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (434) T protein:vir:98 67 RMAMAQSAGYMLVGAHPTRTEDNGRPSPLITMEHPSECIVEYDPETGEPLVGLKVWHNDIDGFGYARVFFDDTSFPYRTR 146 (434) T ss_pred HHHhhcCceEEEEecCCCcccccCCceeEEEEeccceeEEEEeCCCCceEEEEEEEEeccCCceEEEEEEeCcEEEEEEe Confidence 999999999999987654431 2367788888888776543211 1111101000 0 Q ss_pred --------------------------EechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccee Q lcl|Aclame:pro 161 --------------------------ELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGI 214 (416) Q Consensus 161 --------------------------~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v 214 (416) .+..=.|+|+.++......|.|.++.+...++.............+-.+.|..+ T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~N~~~~~~~g~sd~e~vi~liDa~~~~~s~~~~~~~~~a~p~~~ 226 (434) T protein:vir:98 147 ERTGARLPWGPDSWVYTGTADSGDVHDLGGMQLVEFARMPDLGEDPEPEFAGVLDIQDRVNLGILNRMAASRFSGFRQKW 226 (434) T ss_pred eccccccccccccceecccccccccCCCCccceEEeccCCCcCcCCcchhhhHHHHHHHHHHHHHHHHHHHHHhcchhhh Confidence 011123555655433334688888888887777777766666666666667655 Q ss_pred eccC--CcCCHHHHHHHHHHHHHh-hcCCceeecC-CCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC Q lcl|Aclame:pro 215 LKVP--AFLDEKPKENVRKEWKRV-NKVENIAIID-YGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK 290 (416) Q Consensus 215 ~~~~--~~~~~e~~~~~~~~~~~~-~~~~~~~vl~-~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~ 290 (416) +.-. .....+. ......++-. ...+.+++++ ++.++.++..+. -..+.+..+..+..|+..-++|++.+|... T Consensus 227 i~G~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~q~~~~~-~~~~~~~l~~~i~~~~~~~~~p~~~~~~~~- 303 (434) T protein:vir:98 227 IKGHKFAKRTDPA-TGMTVVDQPFVPSPSAVWASEGENTQFGQLDATD-LSGFLKEHASDVRDMLTISQTPTYLYATDL- 303 (434) T ss_pred hcCCCcccccccc-cccchhhhhhhccccccccCCCCCceEEEecCcc-hHHHHHHHHHHHHHHhcccCCCHHHhcccc- Confidence 5421 1111111 1111111111 1223455555 467776665422 234777888889999999999999998532 Q ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHH----HHHHhhc--C-chh-cccccchhhhhhhhhhccHHHHHHHHHHHHhCCC Q lcl|Aclame:pro 291 ATFSNIEHQSIEYVRNTLQPWIVNFEQ----ELNVKLF--L-DHD-QKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGV 362 (416) Q Consensus 291 ~~~s~~e~~~~~f~~~~l~P~~~~i~~----~l~~~l~--~-~~~-~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~ 362 (416) ++ ++.+.. .+....+.-.+...+. .|.+.+- . ..+ ......++..+.+....+..+.++++.++...|+ T Consensus 304 ~n-~Sg~Al--~~~~~~l~~k~~~k~~~f~~~l~~~~rl~~~~~g~~~~~~~~~v~w~~~~~~s~~~~ada~~kl~~~g~ 380 (434) T protein:vir:98 304 VN-ISADTI--GALDILHVAKVREHIASFSEGLESVLALAAAQAGVPEDYTEAEVRWANPAHVTMAVKADAATKLKSIGY 380 (434) T ss_pred CC-hHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhheeeeEEecCCCCCCHHHHHHHHHHHHhcCC Confidence 11 222221 2222222222222222 2222110 0 000 0112234444556778899999999999998785 Q ss_pred cCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 363 LNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 363 ~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +..-+++++|+++-+- +++..-..-..+. ........+.+..|.+.++++ T Consensus 381 -~~e~~~~~lg~~~~e~-~r~~~e~~~~~~~--~~~~~~~~~~~~~g~~~~~~~ 430 (434) T protein:vir:98 381 -PLDVIAEELDESPARV-RRIVAGAASQALL--AASLLPAPGAPSAGNVPDSGG 430 (434) T ss_pred -cHHHHHHhCCCCHHHH-HHHHHHHHHHHHH--HHhhhccCCCCCCCCCCcccC Confidence 7788888898876320 1110000000000 000111122222222222222 No 145 >protein:vir:106027 Length: 629 # NCBI annotation: gp9 # Family: family:all:2798 # MgeID: mge:1505 # MgeName: Cooper # Cross-refs: genbank:acc:YP_654906;genbank:gi:109392362;genbank:GeneID:4157055 Probab=98.96 E-value=4.4e-10 Score=71.89 Aligned_cols=409 Identities=10% Similarity=0.047 Sum_probs=212.1 Q ss_pred Ccchhhhc-cccccccccccc---hhH------HHhhhcCcc-ccccccccHHHHh-ccHHHHHHHHHHHHhhccCcceE Q lcl|Aclame:pro 1 MLLERMFE-KRSGSSDHEDGF---NNI------LLNMFGGRK-TASGERVSESNSL-VQPDIFACVNVLSDDIAKLPIHT 68 (416) Q Consensus 1 m~~~~~f~-~~~~~~~~~~~~---~~~------~~~~~~~~~-~~~~~~~~~~~a~-~~~~v~~~i~~ia~~ia~~~~~~ 68 (416) |--..+-= +|++.+...... .+. +.....+.. ......-. -.++ ..+.++-.+..+++.++++.+.. T Consensus 1 ma~~~lrv~rrpk~~p~~r~l~aasqp~~P~~~~~~~~~g~~~~~~WQ~eA-W~~~d~VgElryyvgW~~ss~Sr~rL~a 79 (629) T protein:vir:10 1 MAASTLRVSRRPKGSPARRSLTAASQPMEPGRTPSRQVAGTVVRTSWQNEA-WECMDLVGELRYYVGWRASSCSRVELIA 79 (629) T ss_pred CCccceeEEecCCCccceeeeccccCCCCcchhhchhhhhhhhhhhhhHHH-HHHHHhhhhHHHHhhhhhhhheeeeEEE Confidence 43222111 112111111100 000 000000100 00011111 1222 24677888899999999999998 Q ss_pred EeecCCccee----eeccchhhh----hccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcE----E-EEEeecc Q lcl|Aclame:pro 69 YKRTDGGIER----KPEHKSAHA----VYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYP----E-ALFPLRP 135 (416) Q Consensus 69 ~~~~~~~~~~----~~~~~~~~~----l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~----~-~l~~l~p 135 (416) -..+.|...+ ..++|.... +..=----+...++++.+..++-+-|+.|+++..-..+.+ . +++.+.. T Consensus 80 s~idpDtg~ptg~i~ed~p~~~~v~~~v~~iagG~lGqaqLlkr~~~~ltV~GE~~i~il~~~~~~pd~~~r~~W~vVt~ 159 (629) T protein:vir:10 80 SELDPDTGKPTGGIRDDDPDGLRFLEIVKTMAGGPLGQAQLQKRAAECLTVPGEHRICLLDQGDKNPDGSVRHNWYVVTN 159 (629) T ss_pred eeecCCCCCCccccccCchhHHHHHHHHHHhcCccchHHHHHHHHHhheeccCceEEEEeecCCCCCCcccccceeeecH Confidence 8877543221 113443332 2222223356789999999999999999999875443432 2 4444444 Q ss_pred ceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCCC---CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Q lcl|Aclame:pro 136 DYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLST---DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPR 212 (416) Q Consensus 136 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~ 212 (416) ..++ ....+.. .....++....|..+.=+.+|-.++ ....--||+.++.+.+....-..+...+..+.-.+-. T Consensus 160 ~Ei~---~kg~g~~-~i~lpdg~~he~~~~~D~l~RvW~P~Prr~~e~DSpvra~l~~lrEi~r~tk~i~~aakSRL~gn 235 (629) T protein:vir:10 160 DEVK---NKGAGKT-DIELPDGTIHEYSKGRDVMFRVWNPRPRRAKEPDSPVRACLDSLREIIRTTKKIRNASKSRLIGN 235 (629) T ss_pred HHhc---cccCcee-EEEcCCCceeeeeCCCeeEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHHhHHhhC Confidence 4433 2222222 2222334445554444444553222 2356789999999988888888888877777766666 Q ss_pred eeeccCCcCC----------------------HHHHHHHHHHHHHhh------cCCc----eeec--CC--CceeEeccC Q lcl|Aclame:pro 213 GILKVPAFLD----------------------EKPKENVRKEWKRVN------KVEN----IAII--DY--GLEYQSISM 256 (416) Q Consensus 213 ~v~~~~~~~~----------------------~e~~~~~~~~~~~~~------~~~~----~~vl--~~--g~~~~~~~~ 256 (416) |++.++..++ .-..+.+.+.|.+.. .... ++++ ++ .-+++.+.+ T Consensus 236 GvlflP~e~slp~~~ap~~~~~Pg~~~p~~~g~aa~d~l~~~l~q~a~aAi~De~S~aA~vPiia~vP~E~l~~ikhLkf 315 (629) T protein:vir:10 236 GVVFLPQELSLPRATAPVADNQPGAPVPIVDGVAAADELSNLLFQTAAAAVDDEDSQAALIPLLATVPGEHLQKIFHLKI 315 (629) T ss_pred ceeEeccCcccccccCCCCCCCCcccccccCCCcchHHHHHHHHHHHHhhhcCCCCccceeeeEEeechHHhcCeeeeee Confidence 7765543221 113445555554321 1111 2222 21 124444444 Q ss_pred Chh-hHHHHHHHHHHHHHHHHHhccchhhccccc-CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcc---- Q lcl|Aclame:pro 257 PLQ-EAQFVESMKFNKAQISMIYKVPLHKLNELD-KATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQK---- 330 (416) Q Consensus 257 ~~~-d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~-~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~---- 330 (416) ... +...+..|+..+..+|...-|||+.|-+++ ++|-=+.=+-...-++--|.|.+..|++.|++.+|.+.-.. T Consensus 316 ~~eite~~iktR~daI~RlAmglDispErLLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~Ait~~~Lrp~L~~eGiD 395 (629) T protein:vir:10 316 GNEITEVEIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVQLHIKPVMEVLCAAIYREVLVATLRAEGID 395 (629) T ss_pred cCchhHHHHhhHHHHHHHHHhccCCChhheeeccCCccceeeEEecccceeeecchHHHHHHHHHHhHHHHHHHHHhCCC Confidence 222 233468899999999999999999887664 44311111111223455699999999999999877543322 Q ss_pred -cccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC--e-----------Eeecc----Ccccc Q lcl|Aclame:pro 331 -SGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD--K-----------YISSL----NYVFL 392 (416) Q Consensus 331 -~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd--~-----------~~~~~----n~~~~ 392 (416) ..|-++||.+.|.. |. ++.+.+..+...|.+|-...|+.+|+...++=| . +..+- -+.|+ T Consensus 396 p~~Yvvw~DaS~Lt~-dP-d~~deA~~a~drGaIt~eAlRr~lG~~~dd~y~~~t~~~~q~~A~~~v~~~P~Li~~~apl 473 (629) T protein:vir:10 396 PDRYVLWYDASGLTV-DP-DKTDEATAAKEQGAITHEAYRRYLGLADEDGYDLETLEGAQAWARDAIVADPSLIKVLAPL 473 (629) T ss_pred HHHhEeeecCccccc-CC-CCcHHHHHHHHcCCccHHHHHHHhccccccCCCcCCcHHHHHHHHHHhcCCCchhhhhhhh Confidence 24668888888733 22 233455668899999999999999998654311 1 11111 11112 Q ss_pred -----ccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 393 -----DFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 393 -----~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) -..+-++.+......+.++.+.|+ T Consensus 474 l~~~l~~i~~P~p~~a~~~~~~~~~~~E~ 502 (629) T protein:vir:10 474 LTDELAEIDWPEPPAALPPGEDDQADEEQ 502 (629) T ss_pred cCCccccccccCCCCcCCCCCcccCcccc Confidence 111111111111111111111111 No 146 >protein:vir:107517 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1481 # MgeName: PG1 # Cross-refs: genbank:acc:NP_943786;genbank:gi:38638411;genbank:GeneID:2657197 Probab=98.95 E-value=1.9e-10 Score=73.86 Aligned_cols=409 Identities=12% Similarity=0.052 Sum_probs=213.6 Q ss_pred Ccch--hhhcccccccccccc---c---hh-------HHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MLLE--RMFEKRSGSSDHEDG---F---NN-------ILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLP 65 (416) Q Consensus 1 m~~~--~~f~~~~~~~~~~~~---~---~~-------~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~ 65 (416) |--. |+.+ |.+...+... . .+ .+....++........-..+-+-..+.++-.+..|++.++++. T Consensus 1 ma~~~lr~~r-rpk~~p~~~rr~~ltaAsq~~~~p~~~~kt~~~~~ar~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~r 79 (639) T protein:vir:10 1 MAATSLRVVR-RPKGSAPAARRRSLTAASQLITDPQKQMKTSLMGTARNEWQSEAWDFSESIGELSYYVSWRANSCSRTT 79 (639) T ss_pred CCccceeeee-cCCCCCcchhhHHHhhhhhccCCcccchhhhccccchhhhhhhhhhhhhhhhhHHHHhhhhhhhhceee Confidence 3322 2222 1111111000 0 00 0000000000001111112222235778889999999999999 Q ss_pred ceEEeecCCccee-----eeccch----hhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEe-ecCCCc------E-E Q lcl|Aclame:pro 66 IHTYKRTDGGIER-----KPEHKS----AHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQ-FGSHGY------P-E 128 (416) Q Consensus 66 ~~~~~~~~~~~~~-----~~~~~~----~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~-r~~~g~------~-~ 128 (416) +..-..+.+...+ ..+++. ......=----+...++++.+..++-+-|++|+++. |...+- + . T Consensus 80 L~as~idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~~~~~~~~~~~ 159 (639) T protein:vir:10 80 LIPSAIDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKDPVTGLAAPRA 159 (639) T ss_pred eEeeeeccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCccccCccccccc Confidence 9998887553321 112222 221211122335678899999999999999999864 444332 2 2 Q ss_pred EEEeeccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCCC---CccccccHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 129 ALFPLRPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLST---DGIHGKSPIGVVREHIGAQAAATKYNAKLY 205 (416) Q Consensus 129 ~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~ 205 (416) +++.+....++ ...++..-. ...++...+|..+.=+.+|-..+ ....--||+.++.+.+....-..+...+.. T Consensus 160 ~W~vvs~~Ei~---~~~~~~~~i-~lPdG~~he~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i~aaa 235 (639) T protein:vir:10 160 RWYAVTREEIK---SKAGETAEI-SLPDGKTHEFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIERTTRKIKNAA 235 (639) T ss_pred ceeeeeHHHhc---ccCCCeeEe-ecCCCCCccccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHH Confidence 44444444443 222222222 22234444554444444553222 245678999999998888888888887777 Q ss_pred hccCCcceeeccCCcCC-------------------------HHHHHHHHHHHHHhh------cCCc----eeecC--C- Q lcl|Aclame:pro 206 KNEATPRGILKVPAFLD-------------------------EKPKENVRKEWKRVN------KVEN----IAIID--Y- 247 (416) Q Consensus 206 ~n~~~~~~v~~~~~~~~-------------------------~e~~~~~~~~~~~~~------~~~~----~~vl~--~- 247 (416) +.-.+-.|++.++..++ .-..+.+.+.+.+.. .... ++++. + T Consensus 236 kSRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~vPiia~~p~E 315 (639) T protein:vir:10 236 KSRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYIPLVASVAAE 315 (639) T ss_pred HHHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCccceeeeeEeechH Confidence 77666667765554332 112344555543321 1111 22221 1 Q ss_pred -CceeEeccCChh-hHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC Q lcl|Aclame:pro 248 -GLEYQSISMPLQ-EAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFL 325 (416) Q Consensus 248 -g~~~~~~~~~~~-d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~ 325 (416) .-+++.+.+... +...+..|+..++.||...-|||+.|-++.++|-=+.=+....-++--|.|.+..|++.|++.+|. T Consensus 316 ~l~~ikhl~f~~ei~e~aiktR~daI~RlA~glDi~pE~LLGl~d~NHWsAWqI~dedvrlHI~P~l~~icdAlT~~~Lr 395 (639) T protein:vir:10 316 HLEKVQHIKFGNEVTEVEIKTRIDAITRLAMGLDVSPERLLGMSKGNHWSAWAIGDEDVQLHIKPVMDLICQAIYNDILT 395 (639) T ss_pred HhcCeeeeeecCchhHHHHhhHHHHHHHHHhccCCchhheeecccccceEEEEecccceeeecchhHHHHHHHHHhhHHH Confidence 124444444322 334578899999999999999999987776554111111112234556999999999999998875 Q ss_pred chhcc-----cccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCe-------------Eeecc Q lcl|Aclame:pro 326 DHDQK-----SGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDK-------------YISSL 387 (416) Q Consensus 326 ~~~~~-----~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~-------------~~~~~ 387 (416) +.-.. ..|-++||.+.|... -.+.+.+..+.+.|.+|-.-.|+.+|+...++=|. +..+- T Consensus 396 p~Le~eGvDp~kYvvW~DaS~Lt~d--Pd~~deA~qa~drGAIt~eAlR~~lG~~edd~yd~~t~e~~~~~A~~~V~~~P 473 (639) T protein:vir:10 396 PLLAREGIDPTKYILWYDASGLTSD--PDLSDEAVEAHDRGAITSAALRRLLNVGEDSGYDLTTLDGCREFAADVVTKNP 473 (639) T ss_pred HHHHHhCCCHHHhEeeecCcccccC--CCCcHHHHHHHHcCCccHHHHHHHhccccccCCCCCCcHHHHHHHHHHhcCCc Confidence 43322 246788998887432 23334566788999999999999999986543221 11000 Q ss_pred ----Ccccccc-----ccccccccCCc--ccCCCCccCCC Q lcl|Aclame:pro 388 ----NYVFLDF-----LEEYQRLKAGG--AMKGGDNKNEG 416 (416) Q Consensus 388 ----n~~~~~~-----~~~~~~~~~~~--~~~gge~~~~~ 416 (416) .+.|+.. .+-++.+.... ..+-++.+++| T Consensus 474 ~li~~~apl~~P~lq~~e~ptp~~a~~~a~~~~~~de~~g 513 (639) T protein:vir:10 474 ELIAMYAPLLSSQLAGIEFPQPANAIESTREDEEDDEDSG 513 (639) T ss_pred chhhhhhhccCccceecccCCCCCCCCCCCCCCCcccccC Confidence 1111110 00001111111 11112222222 No 147 >protein:vir:97900 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1482 # MgeName: Orion # Cross-refs: genbank:acc:YP_655104;genbank:gi:109391854;genbank:GeneID:4157263 Probab=98.95 E-value=1.9e-10 Score=73.86 Aligned_cols=409 Identities=12% Similarity=0.052 Sum_probs=213.6 Q ss_pred Ccch--hhhcccccccccccc---c---hh-------HHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MLLE--RMFEKRSGSSDHEDG---F---NN-------ILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLP 65 (416) Q Consensus 1 m~~~--~~f~~~~~~~~~~~~---~---~~-------~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~ 65 (416) |--. |+.+ |.+...+... . .+ .+....++........-..+-+-..+.++-.+..|++.++++. T Consensus 1 ma~~~lr~~r-rpk~~p~~~rr~~ltaAsq~~~~p~~~~kt~~~~~ar~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~r 79 (639) T protein:vir:97 1 MAATSLRVVR-RPKGSAPAARRRSLTAASQLITDPQKQMKTSLMGTARNEWQSEAWDFSESIGELSYYVSWRANSCSRTT 79 (639) T ss_pred CCccceeeee-cCCCCCcchhhHHHhhhhhccCCcccchhhhccccchhhhhhhhhhhhhhhhhHHHHhhhhhhhhceee Confidence 3322 2222 1111111000 0 00 0000000000001111112222235778889999999999999 Q ss_pred ceEEeecCCccee-----eeccch----hhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEe-ecCCCc------E-E Q lcl|Aclame:pro 66 IHTYKRTDGGIER-----KPEHKS----AHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQ-FGSHGY------P-E 128 (416) Q Consensus 66 ~~~~~~~~~~~~~-----~~~~~~----~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~-r~~~g~------~-~ 128 (416) +..-..+.+...+ ..+++. ......=----+...++++.+..++-+-|++|+++. |...+- + . T Consensus 80 L~as~idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~~~~~~~~~~~ 159 (639) T protein:vir:97 80 LIPSAIDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKDPVTGLAAPRA 159 (639) T ss_pred eEeeeeccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCccccCccccccc Confidence 9998887553321 112222 221211122335678899999999999999999864 444332 2 2 Q ss_pred EEEeeccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCCC---CccccccHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 129 ALFPLRPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLST---DGIHGKSPIGVVREHIGAQAAATKYNAKLY 205 (416) Q Consensus 129 ~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~ 205 (416) +++.+....++ ...++..-. ...++...+|..+.=+.+|-..+ ....--||+.++.+.+....-..+...+.. T Consensus 160 ~W~vvs~~Ei~---~~~~~~~~i-~lPdG~~he~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i~aaa 235 (639) T protein:vir:97 160 RWYAVTREEIK---SKAGETAEI-SLPDGKTHEFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIERTTRKIKNAA 235 (639) T ss_pred ceeeeeHHHhc---ccCCCeeEe-ecCCCCCccccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHHH Confidence 44444444443 222222222 22234444554444444553222 245678999999998888888888887777 Q ss_pred hccCCcceeeccCCcCC-------------------------HHHHHHHHHHHHHhh------cCCc----eeecC--C- Q lcl|Aclame:pro 206 KNEATPRGILKVPAFLD-------------------------EKPKENVRKEWKRVN------KVEN----IAIID--Y- 247 (416) Q Consensus 206 ~n~~~~~~v~~~~~~~~-------------------------~e~~~~~~~~~~~~~------~~~~----~~vl~--~- 247 (416) +.-.+-.|++.++..++ .-..+.+.+.+.+.. .... ++++. + T Consensus 236 kSRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~vPiia~~p~E 315 (639) T protein:vir:97 236 KSRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYIPLVASVAAE 315 (639) T ss_pred HHHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCccceeeeeEeechH Confidence 77666667765554332 112344555543321 1111 22221 1 Q ss_pred -CceeEeccCChh-hHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC Q lcl|Aclame:pro 248 -GLEYQSISMPLQ-EAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFL 325 (416) Q Consensus 248 -g~~~~~~~~~~~-d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~ 325 (416) .-+++.+.+... +...+..|+..++.||...-|||+.|-++.++|-=+.=+....-++--|.|.+..|++.|++.+|. T Consensus 316 ~l~~ikhl~f~~ei~e~aiktR~daI~RlA~glDi~pE~LLGl~d~NHWsAWqI~dedvrlHI~P~l~~icdAlT~~~Lr 395 (639) T protein:vir:97 316 HLEKVQHIKFGNEVTEVEIKTRIDAITRLAMGLDVSPERLLGMSKGNHWSAWAIGDEDVQLHIKPVMDLICQAIYNDILT 395 (639) T ss_pred HhcCeeeeeecCchhHHHHhhHHHHHHHHHhccCCchhheeecccccceEEEEecccceeeecchhHHHHHHHHHhhHHH Confidence 124444444322 334578899999999999999999987776554111111112234556999999999999998875 Q ss_pred chhcc-----cccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCe-------------Eeecc Q lcl|Aclame:pro 326 DHDQK-----SGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDK-------------YISSL 387 (416) Q Consensus 326 ~~~~~-----~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~-------------~~~~~ 387 (416) +.-.. ..|-++||.+.|... -.+.+.+..+.+.|.+|-.-.|+.+|+...++=|. +..+- T Consensus 396 p~Le~eGvDp~kYvvW~DaS~Lt~d--Pd~~deA~qa~drGAIt~eAlR~~lG~~edd~yd~~t~e~~~~~A~~~V~~~P 473 (639) T protein:vir:97 396 PLLAREGIDPTKYILWYDASGLTSD--PDLSDEAVEAHDRGAITSAALRRLLNVGEDSGYDLTTLDGCREFAADVVTKNP 473 (639) T ss_pred HHHHHhCCCHHHhEeeecCcccccC--CCCcHHHHHHHHcCCccHHHHHHHhccccccCCCCCCcHHHHHHHHHHhcCCc Confidence 43322 246788998887432 23334566788999999999999999986543221 11000 Q ss_pred ----Ccccccc-----ccccccccCCc--ccCCCCccCCC Q lcl|Aclame:pro 388 ----NYVFLDF-----LEEYQRLKAGG--AMKGGDNKNEG 416 (416) Q Consensus 388 ----n~~~~~~-----~~~~~~~~~~~--~~~gge~~~~~ 416 (416) .+.|+.. .+-++.+.... ..+-++.+++| T Consensus 474 ~li~~~apl~~P~lq~~e~ptp~~a~~~a~~~~~~de~~g 513 (639) T protein:vir:97 474 ELIAMYAPLLSSQLAGIEFPQPANAIESTREDEEDDEDSG 513 (639) T ss_pred chhhhhhhccCccceecccCCCCCCCCCCCCCCCcccccC Confidence 1111110 00001111111 11112222222 No 148 >protein:vir:38 Length: 496 # NCBI annotation: putative portal protein # Family: family:all:898 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463464;swissprot:trembl:q9t1c0;genbank:gi:16798786;uniprot:Q9T1C0;genbank:GeneID:922383 Probab=98.87 E-value=1.6e-08 Score=63.40 Aligned_cols=388 Identities=10% Similarity=0.047 Sum_probs=186.5 Q ss_pred Ccchhhhccc---ccccccccc--chhHHHhhhcCcccc--------ccccccHHHHhccHHHHHHHHHHHHhhccCcce Q lcl|Aclame:pro 1 MLLERMFEKR---SGSSDHEDG--FNNILLNMFGGRKTA--------SGERVSESNSLVQPDIFACVNVLSDDIAKLPIH 67 (416) Q Consensus 1 m~~~~~f~~~---~~~~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~ 67 (416) ||+.+-++.- .....+... --..+..++.+.... .+.... +..........+++..|+-+..-|.. T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~yy~g~~~~~~~~~~~~~~~~~~-~~~~~~n~~k~i~~~~a~~l~~~p~~ 94 (496) T protein:vir:38 16 MGLLKALKDVKDHKKVNANDEDYKYIDMWKRLYQGHYAEWHNLNYEHNGNPVN-RRQLSMNLPKVTAKYMSKLLFNEKVK 94 (496) T ss_pred hccchhhHHHHhcCCCcCCHHHHHHHHHHHHHhcCCCchhhcchhccCCCccc-cceeecchHHHHHHHHhhhhhCCcce Confidence 4332222210 001101000 011122222221110 000000 11223455667888888888777776 Q ss_pred EEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCc Q lcl|Aclame:pro 68 TYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTG 147 (416) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~ 147 (416) +.-.++ .....| .+-...-...+-...++.+....|.+|+.+..+.+|.+ .+..++|..+-+...+.+. T Consensus 95 i~~~d~---------~~~e~l-~~~~~~n~f~~~~~~~~~~a~~~G~~~~~~~~D~~~~~-~i~~v~~~~~~P~~~~~~~ 163 (496) T protein:vir:38 95 INIDDK---------AAEEFV-LNVLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGNKNV-KVSFATADCMYPLSNDSEN 163 (496) T ss_pred EeeCCh---------HHHHHH-HHHHhccCHHHHHHHHHHHHhhhCcEEEEEEEcCCCcE-EEEEEcccceEEEEecCCc Confidence 543211 111111 11111124556677788899999999999999888775 4566777776665444433 Q ss_pred EE----EEEEeeCCe-------------e-----------------EEec------------------hhheeeeccCCC Q lcl|Aclame:pro 148 ML----WYQTVLNGK-------------A-----------------IELY------------------DYEVLHFKGLST 175 (416) Q Consensus 148 ~~----~~~~~~~~~-------------~-----------------~~~~------------------~~~vih~~~~~~ 175 (416) .. +..+...+. . ..++ .-.+.+++.+-. T Consensus 164 ~~~~~f~~~~~~~~~~y~~le~h~~~~~~~~I~~~~y~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 243 (496) T protein:vir:38 164 VDECVIANSFHKNNKYYTLLEWNEWQGDVYTVTTELYQSDDPNELGTKVSLTLLFDDIEPVVPLPDFTRPTFIYIKPNIA 243 (496) T ss_pred EEEEEEEEEEEeCCeEEEEEEEEEEeCceEEEEEEEEecCCccccCccccccccccccccceeecCCCcceEEEecCCcc Confidence 21 000000000 0 0000 001223333211 Q ss_pred -----CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeec-----cCCcCCHHHHHHHHHHHHHhh---cCCce Q lcl|Aclame:pro 176 -----DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILK-----VPAFLDEKPKENVRKEWKRVN---KVENI 242 (416) Q Consensus 176 -----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~-----~~~~~~~e~~~~~~~~~~~~~---~~~~~ 242 (416) ....|+|.+.-+...++..........+-++.+ .+..++. .....+-+. ...|.... ..... T Consensus 244 N~~~~~~p~G~Sd~~~~~~lid~ld~~~s~~~~~~~~~-~~~i~v~~~~l~~~~~~~g~~----~~~~~~~~~~~~~~~~ 318 (496) T protein:vir:38 244 NNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKLG-KKKVLVPSSFVKTAVNLDGST----TQYFDSTDEAFFLYQG 318 (496) T ss_pred cccccCCcCCCchHhhHHHHHHHHHHHHHHHHHHHhhc-ccceecchHHhhccCCCCCcc----ccCCCCccceEEEeec Confidence 235699999999888888877777666666653 4444331 111100000 00111000 00111 Q ss_pred eecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH-------------HHHHHHHHHH Q lcl|Aclame:pro 243 AIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ-------------SIEYVRNTLQ 309 (416) Q Consensus 243 ~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~-------------~~~f~~~~l~ 309 (416) .-.+++..++.++......++.+..+.....|+...|+|+..+|...++..+ ..+. ....++.+|. T Consensus 319 ~~~~~~~~i~~~~~~i~~e~~~~~l~~~l~~i~~~~g~~~~~f~~~~~g~~t-Atei~~~~~~l~~~~~~~~~~~~~~l~ 397 (496) T protein:vir:38 319 DQDDNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLKT-ATEVVSEKSETYQTKNSHSQLIEQGIK 397 (496) T ss_pred CCCcccccceeeccccCHHHHHHHHHHHHHHHHHhhCCChhhcCCCccccch-HHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 1123334566677677777888899999999999999999999876555332 2221 1222334444 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHh-CCCCCCCCCeEeeccC Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELL-ERNPIENGDKYISSLN 388 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~-gl~p~~ggd~~~~~~n 388 (416) .+++.+-...+...........+..+.+.+++-+..|.++.++.+.+++.+|+|+.-.++..+ |.+. +...+-+ T Consensus 398 ~l~~~il~~~~~~~~~~g~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~~~~GiiS~et~l~~~~~~~d-~ea~~el---- 472 (496) T protein:vir:38 398 EMIVSILEVGKFIEAYSGEVVELDTITVDFDDSIAQDEDTTINRYTNAKNQGMIPLKIALQRAWNITE-AEADEWA---- 472 (496) T ss_pred HHHHHHHHHHHHHHhhcCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHhcCCCCh-HHHHHHH---- Confidence 444444433221111111112244567777788888999999999999999999988887644 4322 1111111 Q ss_pred cccccccccccccc-CCcccCCCCccCC Q lcl|Aclame:pro 389 YVFLDFLEEYQRLK-AGGAMKGGDNKNE 415 (416) Q Consensus 389 ~~~~~~~~~~~~~~-~~~~~~gge~~~~ 415 (416) +...+.++.. ..+...+-.+++| T Consensus 473 ----~ri~~E~~~~~~~~d~~~~~~~~e 496 (496) T protein:vir:38 473 ----EMLAKEKQAEMPNNDMNGIFGEEE 496 (496) T ss_pred ----HHHHHhhhccCccccccCCCCCCC Confidence 1111111111 1111112223333 No 149 >protein:vir:5961 Length: 503 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690661;genbank:geneid:6329220;genbank:gi:22855055;interpro:IPR006428;uniprot:P54309;genbank:GeneID:955279 Probab=98.87 E-value=2.4e-08 Score=62.39 Aligned_cols=392 Identities=8% Similarity=-0.008 Sum_probs=189.0 Q ss_pred Ccchhhhccc-ccccc------------ccccchhHHHhhhcCcccc----------cccccc----HHHHhccHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKR-SGSSD------------HEDGFNNILLNMFGGRKTA----------SGERVS----ESNSLVQPDIFAC 53 (416) Q Consensus 1 m~~~~~f~~~-~~~~~------------~~~~~~~~~~~~~~~~~~~----------~~~~~~----~~~a~~~~~v~~~ 53 (416) |-+..+-... ...+. ....-...+..++.+.... .+.... .+.=+.++....+ T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~~~~ri~~n~~~~i 92 (503) T protein:vir:59 13 EELNEIIVESAKEIAEPDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHKLF 92 (503) T ss_pred HhHHHhhhhhhhhccchhHHHHHHHHHhhcHHHHHHHHHHhccccchhhccchhcccccccccccccccceeecchHHHH Confidence 1111111000 00000 0000011122222221100 000000 0011235667888 Q ss_pred HHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEee Q lcl|Aclame:pro 54 VNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPL 133 (416) Q Consensus 54 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l 133 (416) |+..+.-+..-|+.+.. +++. .. ..+..+.. | ........+..+.+.+|.+|+++..+..|++ .+..+ T Consensus 93 vd~~~~yl~g~~~~~~~-~d~~----~~-~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~dg~~-~i~~~ 160 (503) T protein:vir:59 93 VDQKTQYLVGEPVTFTS-DNKT----LL-EYVNELAD--D---DFDDILNETVKNMSNKGIEYWHPFVDEEGEF-DYVIF 160 (503) T ss_pred HHHHHhhhhcCCeeecc-CcHH----HH-HHHHHHHh--c---CHHHHHHHHHHHHhhCCeEEEEEeecCCCce-EEEEE Confidence 99999999888887532 2111 11 12222322 2 4556777788999999999999999888876 47788 Q ss_pred ccceEEEEEcCCC--cEE----EEEEee-CCee---E-Eechhheeeecc------------------------------ Q lcl|Aclame:pro 134 RPDYTNAYVHPTT--GML----WYQTVL-NGKA---I-ELYDYEVLHFKG------------------------------ 172 (416) Q Consensus 134 ~p~~v~~~~~~~~--~~~----~~~~~~-~~~~---~-~~~~~~vih~~~------------------------------ 172 (416) +|..+-+..++.. ... +|.... .+.. + .+.++.+.++.. T Consensus 161 ~p~~~~~i~d~~~~~~~~~~ir~~~~~~~~~~~~~~~evy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (503) T protein:vir:59 161 PAEEMIVVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWG 240 (503) T ss_pred ccceeEEEEeCCCCCceEEEEEEEEEecCCCceEEEEEEEeCCcEEEEEEcCCcccccccccccccccceeecceeccCC Confidence 8888888776542 211 121111 1110 0 122222222110 Q ss_pred -CC----CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCC-HHHHHHHHHHHHHhhcCCceeecC Q lcl|Aclame:pro 173 -LS----TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLD-EKPKENVRKEWKRVNKVENIAIID 246 (416) Q Consensus 173 -~~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~vl~ 246 (416) .+ .+...|.|.+..+...++....+.....+.+...+.|-.+++--...+ .+.... ....+++.++ T Consensus 241 ~vPiv~~~nn~~~~sd~~~~~~liDa~d~~~s~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~--------~~~~~~~~~~ 312 (503) T protein:vir:59 241 RVPIIPFKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPKEFTAN--------LRYHSVIKVS 312 (503) T ss_pred ccceEEecCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhcCCeeEeecCCccccchhhhh--------hhcccceecc Confidence 00 123458888888888887777666666666777777777665322111 111111 1223455666 Q ss_pred CCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 247 YGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVN 314 (416) Q Consensus 247 ~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~ 314 (416) ++.+...+........+.+..+...+.|+..-++|..-.... .++-|.. .+.....+..+|.-+++. T Consensus 313 ~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~-~~~~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~~ 391 (503) T protein:vir:59 313 GDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETI-GGGATGPALENLYALLDLKANMAERKIRAGLRLFFWF 391 (503) T ss_pred CCCcceeEeccCCHHHHHHHHHHHHHHHHHHhcccCCCcccc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 665555555555555556666777777777777764222111 1221111 112233344445555555 Q ss_pred HHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC--CeEee------- Q lcl|Aclame:pro 315 FEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENG--DKYIS------- 385 (416) Q Consensus 315 i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~gg--d~~~~------- 385 (416) |...++..--.. ......+.+.+..-+..|..+.++.+.+++.+|+++...+.++++.-+.|.- ..+-- T Consensus 392 i~~~~~~~~~~~--~~~~~~i~i~f~~~~p~d~~~~~~~~~kl~~~GiiS~et~l~~l~~v~d~~~E~~ri~~E~~~~~~ 469 (503) T protein:vir:59 392 FAEYLRNTGKGD--FNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARNPFVQDPEEELARIEEEMNQYAE 469 (503) T ss_pred HHHHHHhccCcc--cccccceeEEeCCCCCCCHHHHHHHHHHHHhCCCCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHh Confidence 554444321111 1112235556677788999999999999999999999999988766432210 11000 Q ss_pred -ccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 386 -SLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 386 -~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ..+. .........+....+..+..++..+| T Consensus 470 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g 500 (503) T protein:vir:59 470 MQGNL-LDDEGGDDDLEEDDPNAGAAESGGAG 500 (503) T ss_pred hhccc-cCccCCCCCCCcCCCCCCcccCCCCC Confidence 0000 00000000011111222233344444 No 150 >protein:vir:7768 Length: 484 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:149 # MgeName: Bxz2 # Cross-refs: genbank:acc:NP_817602;genbank:gi:29566032;genbank:GeneID:1259226 Probab=98.82 E-value=8.9e-09 Score=64.71 Aligned_cols=389 Identities=12% Similarity=0.020 Sum_probs=169.0 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--cccccc---HHHHhccHHHHHHHHHHHHhhccCcceEEeecCCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGERVS---ESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG 75 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 75 (416) .+. +.+..+... ...+..+.-+.... .+..+. ........+..-+|+..+..+--..|.+ .++. T Consensus 19 ~l~-~~~~~~~~r-------l~~l~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~---~~~~ 87 (484) T protein:vir:77 19 EML-NLFTERTQD-------LGDNTAYYESERRPDAVGVTVPQQMQKLLAHVGYPRLYIDAIAARQELEGFRL---GGAD 87 (484) T ss_pred HHH-HHHHHHHHH-------HHHHHHHHhccccchhcccccchhHHhhhhhcCcHHHHHHHHHhhhccCceec---CCcc Confidence 111 222211100 01112222221111 001110 1112234556667777776554444442 1111 Q ss_pred ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEE-------EEEeeccceEEEEEcCCCcE Q lcl|Aclame:pro 76 IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPE-------ALFPLRPDYTNAYVHPTTGM 148 (416) Q Consensus 76 ~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~-------~l~~l~p~~v~~~~~~~~~~ 148 (416) . .+..+ +.++.+ | ........+..+++.+|.||..+.+++.|.+. .+.+++|..+.+..++..+. T Consensus 88 ~---~~~~l-~~i~~~-N---~~d~~~~~~~~~a~~~G~a~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~~~~D~~~~~ 159 (484) T protein:vir:77 88 K---ADEQL-WDWWQA-N---DLDIESTLGHTDSLVHGRSYITISKPDPNIDPGVDPEVPIIRVEPPTNLYAQIDPRTRQ 159 (484) T ss_pred h---hHHHH-HHHHHh-c---CHhHHHHHHHHHHhhcCceEEEEecCCCCcccccccccceEEEeccceeEEEecCCCCc Confidence 1 11122 223232 2 33467788999999999999999988877542 46778888888777653221 Q ss_pred EEE----EEe---------------------e-CCeeEE-------echhheeeeccCCC-CccccccHHHH-HHHHHHH Q lcl|Aclame:pro 149 LWY----QTV---------------------L-NGKAIE-------LYDYEVLHFKGLST-DGIHGKSPIGV-VREHIGA 193 (416) Q Consensus 149 ~~~----~~~---------------------~-~~~~~~-------~~~~~vih~~~~~~-~~~~G~s~~~~-~~~~i~~ 193 (416) ..+ ... . .+.... +..=.|+++.+... .+..|.|.+.. +...++. T Consensus 160 ~~~a~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~N~~~~~~~~G~s~i~~~v~~L~Da 239 (484) T protein:vir:77 160 VMRAIRAIEDEEGNEVIGATLYLPNNTVIWNREDGQWVQVANVAHNLEMVPVIPIPNRTRLSDLYGTTEITPELRSVTDA 239 (484) T ss_pred eEEEEEEEEeecCCcEEEEEEEecCeEEEEEecCCceEeeccccCCCCCcceEEeccccccCccCCcccchHHHHHHHHH Confidence 110 000 0 010000 11113566654332 34577776542 3233333 Q ss_pred HHHHHHHHHHHHhccCCcceeeccCCcCCHHHHH--HHHHHHHHhhcCCceeecC-CCceeEeccCChhhHHHHHHHHHH Q lcl|Aclame:pro 194 QAAATKYNAKLYKNEATPRGILKVPAFLDEKPKE--NVRKEWKRVNKVENIAIID-YGLEYQSISMPLQEAQFVESMKFN 270 (416) Q Consensus 194 ~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~--~~~~~~~~~~~~~~~~vl~-~g~~~~~~~~~~~d~~~~e~~~~~ 270 (416) .............-.+.|..++.-- ..++...+ .-...|+. ..+.++.++ ++.++.++..+.-+ .+++..+.. T Consensus 240 ~~~~~s~~~~~~~~~a~p~~~i~G~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~q~~~~~~e-~~~~~l~~~ 315 (484) T protein:vir:77 240 AARTLMLMQATAELMGVPQRLLFGV-KGEELGVDPETGQTLFDA--YLARILAFEDHESKAQQFSAAELR-NFVDALDAL 315 (484) T ss_pred HHHHHHHHHHHHHhhhhhHHHHhCC-Ccchhcccccccchhhhh--hhhhhcccCCCCceeEeecCCChH-HHHHHHHHH Confidence 3322222222333334454444321 11111001 11111211 123455555 46777776643322 477888888 Q ss_pred HHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHH----HHHHHHHHHHHhh--c--Cchh---cccccchhhhh Q lcl|Aclame:pro 271 KAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQP----WIVNFEQELNVKL--F--LDHD---QKSGHYVKFNI 339 (416) Q Consensus 271 ~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P----~~~~i~~~l~~~l--~--~~~~---~~~~~~~~f~~ 339 (416) ...|+..-++|+..+|.... +.++.+... +....+.- ..+.+...|.+.+ + .... ......+++.+ T Consensus 316 i~~~s~~~~~p~~~fg~~~~-n~~Sg~Al~--~~~~~l~~ka~~k~~~f~~~l~~~~~l~~~~~~~~~~~~~~~~i~v~w 392 (484) T protein:vir:77 316 DRKAAAYTGLPPYYLSFSSE-NPASAEAIR--SSESRLVKTVERKNKIFGGAWEQAMRVAYKVMNGGDIPPEYYRMESIW 392 (484) T ss_pred HHHHhcccCCCHHHhccccC-cchHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccceEEe Confidence 88999999999999985432 212222221 11111111 1111222222111 0 0000 01112345555 Q ss_pred hhhhhccHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC--CCCeEeec------cCccccccccccccccCCc---c Q lcl|Aclame:pro 340 DSELRGDSKTQAEYLKTLHETG--VLNKDEIRELLERNPIE--NGDKYISS------LNYVFLDFLEEYQRLKAGG---A 406 (416) Q Consensus 340 ~~l~~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~gl~p~~--ggd~~~~~------~n~~~~~~~~~~~~~~~~~---~ 406 (416) .+....+..+.++.+.+++++| +++..-+++++|+.+.+ ....+.-- ..+.++.... .+....++ . T Consensus 393 ~~~~~~s~~~~ad~~~kl~~~g~gi~s~et~~~~l~~~~~~~~e~~~~~~ee~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 471 (484) T protein:vir:77 393 RDPSTPTYAAKADAATKLYNNGQGVIPKERARIDMGYSITEREEMRKWDEEEQAQGLGLMGTMFGTD-PSGGGNPDNPET 471 (484) T ss_pred cCCCCCCHHHHHHHHHHHHhccCCCCCHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhhcccc-ccCCCCCCCCCc Confidence 6667888999999999998876 89998899999886543 11111000 0000110000 00000000 1 Q ss_pred cCCCCccCCC Q lcl|Aclame:pro 407 MKGGDNKNEG 416 (416) Q Consensus 407 ~~gge~~~~~ 416 (416) .++..+.+++ T Consensus 472 ~~~~~~~~~~ 481 (484) T protein:vir:77 472 PEPQPNPAEE 481 (484) T ss_pred ccccCCCccc Confidence 1111111111 No 151 >protein:vir:104082 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:1656 # MgeName: Che12 # Cross-refs: genbank:acc:YP_655593;genbank:gi:109392464;genbank:GeneID:4156950 Probab=98.79 E-value=8.5e-09 Score=64.82 Aligned_cols=388 Identities=12% Similarity=0.040 Sum_probs=172.4 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--cccccc---HHHHhccHHHHHHHHHHHHhhccCcceEEeecCCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGERVS---ESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG 75 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 75 (416) +.++++.+........ ...+..++-+.... .+..+. .+......+...+|+..+..+--.+|.+ .++. T Consensus 16 ~~~~~l~~~~~~~~~r----~~~~~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~---~~~~ 88 (485) T protein:vir:10 16 IARDEMVSAFEDSTQN----LKTNTSYYEAERRPEAIGVTVPIQMQSLLAHVGYPRLYVDSIAERQAVEGFRF---GDAD 88 (485) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHhcCCcchhcCCCCChhhhhhhhhcCcHHHHHHHHHhhhcccceec---CCCc Confidence 4444444433222211 11222222222111 011111 1111123455677777776653333322 2111 Q ss_pred ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcE-------EEEEeeccceEEEEEcCCCcE Q lcl|Aclame:pro 76 IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYP-------EALFPLRPDYTNAYVHPTTGM 148 (416) Q Consensus 76 ~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~-------~~l~~l~p~~v~~~~~~~~~~ 148 (416) . .+..+ ..++.+ -....+...+..+++.+|.||+++.+++.+.. ..+.+++|..+.+..++..+. T Consensus 89 ~---~~~~~-~~i~~~----N~~d~~~~~~~~~a~i~G~ay~~v~~~e~~~~~~~~~~~~~i~~~~p~~~~~~~D~~~~~ 160 (485) T protein:vir:10 89 E---ADEEL-WQWWQA----NNLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNTPIIRVEPPTRMYAEIDPRIGR 160 (485) T ss_pred h---hHHHH-HHHHHh----cCHhHHHHHHHHHHhhcCceEEEEeeCCcccccccCCCeeEEEEEccceeEEEEcCCCCc Confidence 1 11112 223222 13456778899999999999999988764322 257778888888777654432 Q ss_pred EE--EE--EeeCCee---E-Eech-------------------------hheeeeccCC-CCccccccHHHH-HHHHHHH Q lcl|Aclame:pro 149 LW--YQ--TVLNGKA---I-ELYD-------------------------YEVLHFKGLS-TDGIHGKSPIGV-VREHIGA 193 (416) Q Consensus 149 ~~--~~--~~~~~~~---~-~~~~-------------------------~~vih~~~~~-~~~~~G~s~~~~-~~~~i~~ 193 (416) .. +. +...++. . .+.+ =.|+++.+.. ..+.+|.|.+.. +...++. T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~i~~~v~~liDa 240 (485) T protein:vir:10 161 VSKAIRVAYDAEGNEIQAATLYTPNDIFGWYRVENEWQEWFNNPHGLGVVPVVPIPNRTRLSDLYGTSEITPELRSMTDA 240 (485) T ss_pred eeEEEEEEEeeCCCeEEEEEEEeCCeEEEEEEcCCceEEeccccCCCCcccEEEeccccccCCCCCccchhHHHHHHHHH Confidence 11 11 1111110 0 0111 1345555432 234578776542 2333333 Q ss_pred HHHHHHHHHHHHhccCCcceeeccCCcCCHHHHH--HHHHHHHHhhcCCceeecC-CCceeEeccCChhhHHHHHHHHHH Q lcl|Aclame:pro 194 QAAATKYNAKLYKNEATPRGILKVPAFLDEKPKE--NVRKEWKRVNKVENIAIID-YGLEYQSISMPLQEAQFVESMKFN 270 (416) Q Consensus 194 ~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~--~~~~~~~~~~~~~~~~vl~-~g~~~~~~~~~~~d~~~~e~~~~~ 270 (416) .............-.+.|..++.-.. ..+...+ .-...|+. ..+.++.++ ++.++.++....- -.+++..+.. T Consensus 241 ~~~~~s~~~~~~~~~a~p~~~i~G~~-~~~~~~~~~~~~~~~~~--~~~~i~~~~~~d~k~~q~~~~~~-~~~~~~l~~~ 316 (485) T protein:vir:10 241 AARILMLMQATAELMGVPQRLIFGIK-PEEIGVDPETGQTLFDA--YLARILAFEDAEGKIQQFSAAEL-ANFTNALDQI 316 (485) T ss_pred HHHHHHHHHHHHHhhcchHHHHhcCC-cccccccccccchhhhh--cccceeccCCCCceEEeecccch-HHHHHHHHHH Confidence 22222222223333444544443211 1100000 00111111 124455554 5677776654332 2477888888 Q ss_pred HHHHHHHhccchhhcccccCCCcccHHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhh Q lcl|Aclame:pro 271 KAQISMIYKVPLHKLNELDKATFSNIEHQ-------------SIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKF 337 (416) Q Consensus 271 ~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~-------------~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f 337 (416) ...|+..-++|+..+|.... +.++.+.. ....+..++..+++.+....+. .........+++ T Consensus 317 i~~~~~~~~~p~~~fg~~~~-n~~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~l~~~~~~~----~~~~~~~~~i~v 391 (485) T protein:vir:10 317 AKQVAAYTGLPPQYLSTAAD-NPASAEAIRAAESRLIKKVERKNSIFGGAWEEAMRLAYRMMKG----GDVPPDMLRMET 391 (485) T ss_pred HHHHhcccCCCHHHhccccC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCcccceeeeE Confidence 88999999999999975432 11221111 1112222232222222111110 000111234555 Q ss_pred hhhhhhhccHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC--CCCe---------------EeeccCcccccccccc Q lcl|Aclame:pro 338 NIDSELRGDSKTQAEYLKTLHETG--VLNKDEIRELLERNPIE--NGDK---------------YISSLNYVFLDFLEEY 398 (416) Q Consensus 338 ~~~~l~~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~gl~p~~--ggd~---------------~~~~~n~~~~~~~~~~ 398 (416) .+.+....+..+.++++.+++++| +++..-+++.+|+.+.+ ...+ +..+....+ +..+.. T Consensus 392 ~w~~~~~~~~~~~ada~~kl~~ag~~~~s~et~~~~lg~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~-~~~~~~ 470 (485) T protein:vir:10 392 VWRDPSTPTYAAKADAASKLYNGGTGVIPRERARKDMGYSIAEREEMRRWDEEEAAMGLGLIGTMVDPNPTVP-GSPSPA 470 (485) T ss_pred EecCCCCCCHHHHHHHHHHHHhccccCCCHHHHHHhCCCCHhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC-CCCCcc Confidence 556677889999999999999866 88999999999987642 1111 111111000 000000 Q ss_pred ccccCCcccCCCCcc Q lcl|Aclame:pro 399 QRLKAGGAMKGGDNK 413 (416) Q Consensus 399 ~~~~~~~~~~gge~~ 413 (416) ++...+....||+.- T Consensus 471 ~~~~~~~~~~~~~~~ 485 (485) T protein:vir:10 471 PAPKPAALESGGDAA 485 (485) T ss_pred ccccCcCCCCCCCCC Confidence 111111112222222 No 152 >protein:vir:4898 Length: 502 # NCBI annotation: gp502 # Family: family:all:125 # MgeID: mge:107 # MgeName: Sfi11 # Cross-refs: genbank:acc:NP_056676;genbank:gi:9635011;genbank:GeneID:1262662 Probab=98.76 E-value=5.1e-08 Score=60.56 Aligned_cols=398 Identities=12% Similarity=0.028 Sum_probs=193.1 Q ss_pred Cc---chhhhccccccccccccchhHHHhhhcCcccc---ccccc---cHHHHhccHHHHHHHHHHHHhhccCcceEEee Q lcl|Aclame:pro 1 ML---LERMFEKRSGSSDHEDGFNNILLNMFGGRKTA---SGERV---SESNSLVQPDIFACVNVLSDDIAKLPIHTYKR 71 (416) Q Consensus 1 m~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 71 (416) .. +.++..+......+ -...+..++.+.... ..... ....-.........|+..+.-+-.-|+.+... T Consensus 40 ~~~~~i~~~i~~h~~~~~~---rl~~l~~yY~g~~~~i~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~g~p~~~~~~ 116 (502) T protein:vir:48 40 NNWELLKNFINHHKLRQAP---RIQELLDYARGENHDVLKSGRRKDNEMADKRAVHNYGRMISKFKTGYLAGNPIRVEYD 116 (502) T ss_pred ccHHHHHHHHHHHHHHHHH---HHHHHHHHhcCCCccccccccccccccccceeecchHHHHHHHHhhhhcccCeeEecC Confidence 11 12222211101000 001111222221100 00000 00111235667788888998888889877653 Q ss_pred cCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC--CcEE Q lcl|Aclame:pro 72 TDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT--TGML 149 (416) Q Consensus 72 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~--~~~~ 149 (416) ++... ..+...| .+.+..-........+..+++.+|.||+++.+++.|.+ .+..++|..+.+..++. +... T Consensus 117 d~~~~-----~~~~~~l-~~~~~~N~~~~~~~~~~~~~~~~G~a~~~v~~dedg~~-~i~~~~p~~~~~vydd~~~~~~~ 189 (502) T protein:vir:48 117 DNEDN-----SQNDDAI-KRIGRINDIDTHNRNLIRDLSQTGRAYEVIYRSEYDET-RIKRLSPLETFVIYDNSLEDNSI 189 (502) T ss_pred Cccch-----hHHHHHH-HHHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCce-EEEEEcccceEEEEcCCCCCceE Confidence 32211 1122222 22222224557888899999999999999999988875 46778888888877653 2221 Q ss_pred ----EEEEeeC-Ce--eE-EechhheeeeccC----------C----------CCccccccHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 150 ----WYQTVLN-GK--AI-ELYDYEVLHFKGL----------S----------TDGIHGKSPIGVVREHIGAQAAATKYN 201 (416) Q Consensus 150 ----~~~~~~~-~~--~~-~~~~~~vih~~~~----------~----------~~~~~G~s~~~~~~~~i~~~~~~~~~~ 201 (416) +|..... +. .+ .+.++.++++... + .+...|.|.++.+...++....+.... T Consensus 190 ~~ir~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~d~~~S~~ 269 (502) T protein:vir:48 190 AAVRYYNRGTLQNAKDVVEIYTNQHIYTLDASDSFNEISVTPHAFGTVPITEFLNNADGIGDYETELYLIDLYDSAESDT 269 (502) T ss_pred EEEEEEEEeecCCcEEEEEEEeCCeEEEEEeCCceeeccceecCCCccceEEecCCCCCCCchhhhHHHHHHHHHHHHHH Confidence 1111111 11 11 1222333222210 0 113368888888888888888877777 Q ss_pred HHHHhccCCcceeeccCCcC-CHHHHHHHHHHHH-HhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 202 AKLYKNEATPRGILKVPAFL-DEKPKENVRKEWK-RVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYK 279 (416) Q Consensus 202 ~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~~-~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~g 279 (416) .+.+...+.|-.+++..... .++....+++... .....+......++.++..+.............+...+.|+..-+ T Consensus 270 ~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~L~~~I~~~s~ 349 (502) T protein:vir:48 270 ANHMSDMADAILAIYGDLALPQGMQASDMKRTRLMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAYKTRLNKDIHVFTN 349 (502) T ss_pred HHHHHHhcCceeeeecCcccccccchhhhhhcceeeccccccccccccCcceeEeeecCCHHHHHHHHHHHHHHHHHHhC Confidence 87888777777776654322 2222222221110 000111111223455665566555555666778889999999999 Q ss_pred cchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccH Q lcl|Aclame:pro 280 VPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDS 347 (416) Q Consensus 280 vp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~ 347 (416) +|....+.. .++-|... ......+..+|.-.++.+...++..--.. ......+.+.+...+..|. T Consensus 350 ~p~~~~~~~-~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~--~~d~~~i~i~f~~~~p~d~ 426 (502) T protein:vir:48 350 TPDMSDNHF-SGNASGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFK--DFDESRLKITFTPNLPKSL 426 (502) T ss_pred CCCcCcccc-ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--ccccccceEEeCCCCCcCH Confidence 997554332 22222111 11223444455555555555444321111 1111235555667788899 Q ss_pred HHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 348 KTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 348 ~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) .+.++.+.++ +|+++..-+.+++++-..|. ...+.-=. ...+ .............+|+++.+++ T Consensus 427 ~e~a~~~~kl--~g~iS~et~l~~l~~v~D~~~E~~ri~~E~--~~~~-~~~~~~~~~~~~~~~~d~~~e~ 492 (502) T protein:vir:48 427 YEQVSILNDL--GGQVSQETALSLSGLVENPTEELDKINEES--SKID-FKGYPSYFYDNVGKYTDEVKET 492 (502) T ss_pred HHHHHHHHHH--hccCcHHHHHHhCCCCCCHHHHHHHHHHHH--Hhhh-hhcccccccccccccCCCccCC Confidence 9999999888 58999988888886533211 11110000 0000 0000000000111222322222 No 153 >protein:vir:106639 Length: 481 # NCBI annotation: ORF003 # Family: family:all:125 # MgeID: mge:1557 # MgeName: 187 # Cross-refs: genbank:acc:YP_239490;genbank:gi:66395218;genbank:GeneID:4555793 Probab=98.75 E-value=1.8e-08 Score=62.99 Aligned_cols=390 Identities=10% Similarity=0.017 Sum_probs=182.4 Q ss_pred Ccchhh---------------------------hccccccccccccchhHHHhhhcCccccc--c--ccc----cHHHHh Q lcl|Aclame:pro 1 MLLERM---------------------------FEKRSGSSDHEDGFNNILLNMFGGRKTAS--G--ERV----SESNSL 45 (416) Q Consensus 1 m~~~~~---------------------------f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~----~~~~a~ 45 (416) |.+.+. ..+.. .....-...+..++-+..... . ... ....-+ T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~---~~~~~~~~~~~~yY~g~~~~i~~~~~~~~~~~~~~~~ki 82 (481) T protein:vir:10 6 INNINTKFSPLANDDFVVSDLAELLKEENLRNFISRHQ---TEQVPRLEMLESYYLNRNTDILAGERRLQKYGDKADHRA 82 (481) T ss_pred eehhchhcccccCceeeeecchhhcCHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCcccccCcccccccccccccee Confidence 111111 11000 000000111222222211100 0 000 001113 Q ss_pred ccHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCC Q lcl|Aclame:pro 46 VQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHG 125 (416) Q Consensus 46 ~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g 125 (416) ..+....+|+..+.-+..-|+.+...+ +. ....+ ..++.+ -....+...+..+.+.+|.+|+++..+++| T Consensus 83 ~~n~~~~ivd~~~~~l~g~~~~~~~~d-~~----~~~~l-~~~~~~----n~~~~~~~~~~~~~~~~G~~~~~~~~d~dg 152 (481) T protein:vir:10 83 VHNYAKYVSRFIVGYLTGNPITITHQD-NQ----TNDKI-IELNDL----NDADEVNSDLALNLSIYGRAYEIVYRDFED 152 (481) T ss_pred ecchHHHHHHHHHhhhccCCceEecCC-hh----HHHHH-HHHHHh----cChhHHHHHHHHHHHhcCeEEEEEEeCCCC Confidence 456677888888888887777643322 11 11122 233333 235578888999999999999999998888 Q ss_pred cEEEEEeeccceEEEEEcCCCc--EE----EEEEeeC-CeeE----EechhheeeeccCC-------------------- Q lcl|Aclame:pro 126 YPEALFPLRPDYTNAYVHPTTG--ML----WYQTVLN-GKAI----ELYDYEVLHFKGLS-------------------- 174 (416) Q Consensus 126 ~~~~l~~l~p~~v~~~~~~~~~--~~----~~~~~~~-~~~~----~~~~~~vih~~~~~-------------------- 174 (416) .+ .+..++|..+.+..++... .. +|..... +..+ .+.++.+++++... T Consensus 153 ~~-~i~~~~p~~~~~v~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~ 231 (481) T protein:vir:10 153 RD-TFKVLDPKSTFVVYDQTLDKKVVAGVRYFEKQDKDKVPVQHVEVYTTDKIYYIEIKGGTYHRVEEVEHYYNDVPIIE 231 (481) T ss_pred eE-EEEEEcccceEEEEcCCCCCceEEEEEEEEEeeCCCceEEEEEEEecCeEEEEEecCCceeecccccccCCceeEEE Confidence 76 5778899888888775432 11 1211111 1110 12233333322110 Q ss_pred -CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceee--cCCCcee Q lcl|Aclame:pro 175 -TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAI--IDYGLEY 251 (416) Q Consensus 175 -~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~v--l~~g~~~ 251 (416) .+...|.|.+..+...++............+.-.+.|..++......+++..+.++..-. .....+... .+++.++ T Consensus 232 ~~n~~~g~~~~~~v~~lida~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 310 (481) T protein:vir:10 232 YLNDQFKQGDFENVIALIDLYDSAQSDTANYMTDLNDAMLAIIGNVDLDSEDAKAFRDANM-IHLEPGTNANGSEGKAEV 310 (481) T ss_pred eecCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhcCceeEeecCcCCCccchhhhhhccc-eeccccccccCCCCCcce Confidence 013357787777777666555555555555666666777776544444444444333110 000111111 2233444 Q ss_pred EeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH-------------HHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 252 QSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ-------------SIEYVRNTLQPWIVNFEQE 318 (416) Q Consensus 252 ~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~-------------~~~f~~~~l~P~~~~i~~~ 318 (416) .-+........+.+..+...+.|+.+-++|....+... ++-|. ++. ....+..++.-+++.+... T Consensus 311 ~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~-~n~Sg-~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~ 388 (481) T protein:vir:10 311 KYVYKQYDVAGVEAYKKRLQNDIHKYTNTPDLNDEQFS-GVQSG-ESMKYKLFGLEQVRAIKERLFKKGLMKRYKLLLNN 388 (481) T ss_pred eEEeecCCHHHHHHHHHHHHHHHHHHhCCccccccccc-cccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 44444445566778888999999999999976555332 22221 111 1111222222222222222 Q ss_pred HHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCcccccccc Q lcl|Aclame:pro 319 LNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLE 396 (416) Q Consensus 319 l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~ 396 (416) ++..-... .....+.+.+..-...|..+.++.+.++ .|+++.-.+.+++++-..+. .+.+-- - ..+... T Consensus 389 ~~~~~~~~---~~~~~i~v~f~~~~~~~~~~~a~~~~kl--~g~is~et~~~~l~~i~d~~~E~~ri~~--E--~~~~~~ 459 (481) T protein:vir:10 389 VNLTGLKQ---HNYAELTITFTPNLPKSMMESINAFNAL--SGGVSESTRLSLLDFIDNPKEELEKMQE--E--EAQREK 459 (481) T ss_pred HhccCCCc---cccceeeEEeCCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHH--H--HHHHHh Confidence 22111111 1112345555677788999999999888 48899888888876532211 111000 0 000000 Q ss_pred ccccccCC--cccCCCCccCCC Q lcl|Aclame:pro 397 EYQRLKAG--GAMKGGDNKNEG 416 (416) Q Consensus 397 ~~~~~~~~--~~~~gge~~~~~ 416 (416) ..++...+ ....++..+.+| T Consensus 460 ~~~~~~~~~~~~~~~~~dd~~g 481 (481) T protein:vir:10 460 QADKRGYGEAFENHLNVDDSNG 481 (481) T ss_pred hhhhccCCccCCCCCCCCCCCC Confidence 00011111 122233344555 No 154 >protein:vir:7987 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:151 # MgeName: Che8 # Cross-refs: genbank:acc:NP_817341;genbank:gi:29565769;genbank:GeneID:1258964 Probab=98.74 E-value=1.5e-08 Score=63.51 Aligned_cols=384 Identities=13% Similarity=0.035 Sum_probs=176.9 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--ccccc-----cHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGERV-----SESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) =+++++.+........ ...+..++.+.... .+..+ .........+...+|+..+..+-.-|+.+...+ T Consensus 8 ~~~~~l~~~~~~~~~r----~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~~~~~- 82 (456) T protein:vir:79 8 EWLPVLTKRIDDGMSR----VRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVGGSA- 82 (456) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHhccCChhhcCcccChhhchhhhhhhcchHHHHHHHHHhhhccCCeecCCCC- Confidence 0112222211110000 11122222221110 00000 011112345678899999988888888753222 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcE----- Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGM----- 148 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~----- 148 (416) +.. ....+ ..++.+ | ....+...+..+++.+|.||..+..++.|.+ .+..++|..+.+..++.... T Consensus 83 d~~---~~~~~-~~~~~~-n---~~d~~~~~~~~~a~~~G~a~~~~~~~edg~~-~i~~~~p~~~~~i~d~~~~~~~~~~ 153 (456) T protein:vir:79 83 DSD---LALRA-RRIWRD-N---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWRIRSA 153 (456) T ss_pred Ccc---HHHHH-HHHHHh-c---ChhHHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEeccceeEEEEcCCCCCceEEE Confidence 111 11112 223333 2 2346677899999999999999998988987 57888888888877653321 Q ss_pred -EEEEEeeCCee-----------EE-----------------------echhheeeecc-C---CCCccccccHHHHHHH Q lcl|Aclame:pro 149 -LWYQTVLNGKA-----------IE-----------------------LYDYEVLHFKG-L---STDGIHGKSPIGVVRE 189 (416) Q Consensus 149 -~~~~~~~~~~~-----------~~-----------------------~~~~~vih~~~-~---~~~~~~G~s~~~~~~~ 189 (416) .+|. ...... +. .+..++-|.-. + ..+...|+|.++.... T Consensus 154 ~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~~~gd~e~v~~ 232 (456) T protein:vir:79 154 MRWWR-DLDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHID 232 (456) T ss_pred EEEEE-ecCCceeEEEEEcCCceEEEEEEEEeeccccceeeeccCCceeecccccCCCCceeEEEecCCCCCchhhhhHH Confidence 1110 000000 00 00001111100 0 0122357777776665 Q ss_pred HHHHHHHHHHHHHHHHhccCCcceeeccCC---cCCHHHHHHH--HHHHHHhhcCCceeecCCCceeEeccCChhhHHHH Q lcl|Aclame:pro 190 HIGAQAAATKYNAKLYKNEATPRGILKVPA---FLDEKPKENV--RKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFV 264 (416) Q Consensus 190 ~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~---~~~~e~~~~~--~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~ 264 (416) .++.......-........+.|..++.-.. ...++.-+.+ .+.|.. ..+.++.++++.++.++..+. -..+. T Consensus 233 liD~~~~~~s~~~~~~~~~a~~~~~~~G~~~~~~~~d~~g~~i~~~~~~~~--~~~~~~~~~~~~~~~q~~~~~-~~~~~ 309 (456) T protein:vir:79 233 IINRINRAELQLLSTMAIQAFRQRALKSSEHRLPKVDENGNAIDYASIFEA--APGALWELPPGVDIWESQTND-FTPML 309 (456) T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhcCCcccccccccccccchhhhhhh--hccccccCCCCcceeeecccC-hHHHH Confidence 555444333333333334444444332211 0111111111 112221 224466778888887765322 23477 Q ss_pred HHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHH----HHhh---cCchhcccccchhh Q lcl|Aclame:pro 265 ESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQEL----NVKL---FLDHDQKSGHYVKF 337 (416) Q Consensus 265 e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l----~~~l---~~~~~~~~~~~~~f 337 (416) +..+.....|+..-++|+..++.... |.| .+.. .+....+.-.+...+..| .+.+ +--.+......++. T Consensus 310 ~~l~~~i~~i~~~t~~p~~~~~~~~~-N~S-g~Al--~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~g~~~~~~i~v 385 (456) T protein:vir:79 310 SAIKEHIRQLSSATKTPLPMLMPDSA-NQS-AEGA--HNIEKGFLFKCEDRLSIAKIGLEAILVKALQIEGESVEDTVDV 385 (456) T ss_pred HHHHHHHHHHHhhcCCChhHhccccc-CcH-HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccceE Confidence 88999999999999999999985332 211 1111 122122222222222222 1111 00011111123444 Q ss_pred hhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 338 NIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 338 ~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) .+.+....+..+.++++.+++..|+++..-+++.+|+.+.+= .. ...+...+....-.++... ..+.++ T Consensus 386 ~w~~~~~~s~~~~ada~~kl~~~G~~~~~~~~~~lg~~~~~i------~~--~e~~r~~~e~~~~~~~~~~--~~~~~~ 454 (456) T protein:vir:79 386 SFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQI------KQ--DDLDRAREQITLFAGNPVQ--RPQEDG 454 (456) T ss_pred EeCCCCCcCHHHHHHHHHHHHhcCCChHHHHHhcCCCCHHHH------HH--HHHHHHHHHHHHHhhhHhh--cCCCCC Confidence 445566788899999999999999999988888888865310 00 0000000000111111111 112222 No 155 >protein:vir:5839 Length: 533 # NCBI annotation: similar to portal vertex protein of head # Family: family:all:1036 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835625;genbank:gi:30044028 Probab=98.73 E-value=2.2e-08 Score=62.59 Aligned_cols=405 Identities=12% Similarity=0.115 Sum_probs=197.7 Q ss_pred Ccchhhhcc----ccccccccc-c-chh-----HHHhhhcCcccccc--ccccHHHHhccHHHHHHHHHHHHhhccCc-- Q lcl|Aclame:pro 1 MLLERMFEK----RSGSSDHED-G-FNN-----ILLNMFGGRKTASG--ERVSESNSLVQPDIFACVNVLSDDIAKLP-- 65 (416) Q Consensus 1 m~~~~~f~~----~~~~~~~~~-~-~~~-----~~~~~~~~~~~~~~--~~~~~~~a~~~~~v~~~i~~ia~~ia~~~-- 65 (416) -+.+++|.- .+....+.. . ..+ .....+++...... ...-++.++.+|.|..||+.|.+.+.-.. T Consensus 18 ~~~~~~~~~~~p~~~dG~s~i~~~~~~~~~~~~~~~~~~gg~~~n~~eLI~~YR~ma~~~pEVd~AideIvneaiv~d~~ 97 (533) T protein:vir:58 18 NFLSPMYGMGAPHGAGGSSMIPINMYHPFATAGYASRFYGGIEFNRFFLYDMYDRMDYTDPLISTVLDIIADECTIPNEN 97 (533) T ss_pred HhhchhhcccCccCCCCCccccCCCCcchhhhhhhhhhhccccccHHHHHHHHHHhhccCcchhhHHHhhhceeeEecCC Confidence 333444432 111111111 0 101 11112221111000 11123445678999999999998765332 Q ss_pred ---ceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec-CCCcEEEEEeeccceEEEE Q lcl|Aclame:pro 66 ---IHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG-SHGYPEALFPLRPDYTNAY 141 (416) Q Consensus 66 ---~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~-~~g~~~~l~~l~p~~v~~~ 141 (416) ..+...+. .....+...... .++...--+.+++.|...|+.|..+..+ ..+-+.+|..|+|..++.+ T Consensus 98 ~~pV~v~l~~~-e~s~~iK~kI~~--------lldf~~~~~~~fR~WYVDGriy~Hkiik~~k~GI~elr~lDPr~i~~v 168 (533) T protein:vir:58 98 GNIVDVVTKDI-ELAKAILSYLDY--------VINIEKNAYPIIRNMIKYGDMFLHILEKGSDGTIEKFQVVSPYIFSKR 168 (533) T ss_pred CceeEeecccc-cccHHHHHHHHH--------HhcchhhhhHHHHhhhhcceeEEEeccCCcccchhhheecCCeeeEEE Confidence 22211110 011111111112 2333344455677888999999998642 4455789999999999999 Q ss_pred EcCCCcEEEEEEe-------eCCeeEEechhheeeeccC--CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcc Q lcl|Aclame:pro 142 VHPTTGMLWYQTV-------LNGKAIELYDYEVLHFKGL--STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPR 212 (416) Q Consensus 142 ~~~~~~~~~~~~~-------~~~~~~~~~~~~vih~~~~--~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~ 212 (416) .+..+...||.|. ..+..+.++.+.|.|+.+- ..++-+++|-+..+...+....-+++...-+--..+.-+ T Consensus 169 r~~~t~~eyyvy~~~~~~~~s~~~~~kI~~daI~y~~SGl~d~~~~~iisyLhkAiKp~NQLkmiEDAlVIYRisRAPeR 248 (533) T protein:vir:58 169 YNPETDTWYYVITDVYRNVVSGYFNEDIPEEDVIHFSHKIDTNFFPYGRSYLESARAIWNQLRLMEDALMLYRVVRSVDR 248 (533) T ss_pred EeeccceEEEeecccccccccCccccccchhheeeeeeccccCCCCceehhhhHHHHHHHHHHHHHHHHHHHhhcCChhh Confidence 8887777777665 3344578999999999853 345678889999998888888888877764444444333 Q ss_pred eeecc--CCcCCHHHHHHHHHHHHHhh-------cCCce----------eec----------CCCceeEeccCChhhHHH Q lcl|Aclame:pro 213 GILKV--PAFLDEKPKENVRKEWKRVN-------KVENI----------AII----------DYGLEYQSISMPLQEAQF 263 (416) Q Consensus 213 ~v~~~--~~~~~~e~~~~~~~~~~~~~-------~~~~~----------~vl----------~~g~~~~~~~~~~~d~~~ 263 (416) -|+.+ ..-...++.+=++..+.+.. +.|.+ ..+ ..|.+++.|.-. . +.- T Consensus 249 RvFYIDVGNlpk~KAeqYl~~im~k~kNklvYDa~TGev~ddrk~m~~~sMlEDyWLpRReGgrgTEI~TLpGg-~-lge 326 (533) T protein:vir:58 249 RVFYVDVGNVPPDKINEYLTNIAMQYKRDYWVRNNQNQFLGIDNYFSIESILKDYFIPRRGDRRAVEIDILQGS-K-VDL 326 (533) T ss_pred eEEEEeecCCCccCHHHHHHHHHHhcccceEEeccCCeEeeccchhhhhhhHhhhcccccCCCccceeeecCCC-C-CCc Confidence 34443 33223333333333333222 12222 111 235677776642 3 666 Q ss_pred HHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhccc-ccchhhhhhhh Q lcl|Aclame:pro 264 VESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKS-GHYVKFNIDSE 342 (416) Q Consensus 264 ~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~-~~~~~f~~~~l 342 (416) ++-.++..+.+.++++||.+-++...+...++-=.--..-+..-|.-+...+++.|...|........ .+.+.|..|.. T Consensus 327 meDV~YF~kkLy~ALnVP~sRl~~e~~fgr~~eItRDEiKF~KFI~rLR~rF~~ll~~qLilk~iit~eew~~~f~~Dn~ 406 (533) T protein:vir:58 327 AEDVEYMLNRLISALKVPKAFIGYEGDVNAKNTLATQDIKFNNTIKRIQGFFVEELERMVRMNKEFADQDFRLVMNRSNS 406 (533) T ss_pred HHHHHHHHHHHHHHhCCCeeecCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHhcccccccCcchhheeeeeeccch Confidence 67788999999999999999997654433322111111223344778888899999888765433322 22233333321 Q ss_pred hhc-----cHHHHHHHHHHH---H-----hCCC--cC-----HHHHHHHhCCCCC---CCCCeEeeccCc-----ccccc Q lcl|Aclame:pro 343 LRG-----DSKTQAEYLKTL---H-----ETGV--LN-----KDEIRELLERNPI---ENGDKYISSLNY-----VFLDF 394 (416) Q Consensus 343 ~~~-----d~~~~~~~~~~~---~-----~~g~--~t-----~NE~R~~~gl~p~---~ggd~~~~~~n~-----~~~~~ 394 (416) ... -+..+++.+..+ + ..-+ || -.|+-+..+..++ |+-++=..|... .|++. T Consensus 407 f~ElKe~Eil~~Ri~~l~~~dpyvgk~yi~k~ILr~tdei~~q~e~ie~E~~~~~~~~~~~~~e~~~~~~~~~~~~p~~~ 486 (533) T protein:vir:58 407 IVEGERFAVIEQRIGIAERLKGWVREDWIYSNILQIPYDLKPQEEVAEAAGGGGLFDTGGFGEETTPADFLGERGSPIES 486 (533) T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHhcCChhhhHHHHHHHHhhcCCCCCCCCcccccCCcccCccccCcccC Confidence 110 011222222211 0 0001 22 1122222222221 111111122211 12221 Q ss_pred cccc---ccccCCcccCCCCccCCC Q lcl|Aclame:pro 395 LEEY---QRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 395 ~~~~---~~~~~~~~~~gge~~~~~ 416 (416) +-.. +...+++..-||+-+-.| T Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (533) T protein:vir:58 487 PRGRTEFDFGTEGGEELGGELNLGG 511 (533) T ss_pred CCChhhHhcccCCcccccccccccc Confidence 1111 112222223333333323 No 156 >protein:vir:105889 Length: 474 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1514 # MgeName: phiETA3 # Cross-refs: genbank:acc:YP_001004371;genbank:gi:122891826;genbank:GeneID:4712360 Probab=98.73 E-value=8e-08 Score=59.49 Aligned_cols=393 Identities=11% Similarity=0.052 Sum_probs=196.0 Q ss_pred Ccchhhhccccccc-----------------cccccchhHHHh------hhcCcc------cccc---ccc--cHHHHhc Q lcl|Aclame:pro 1 MLLERMFEKRSGSS-----------------DHEDGFNNILLN------MFGGRK------TASG---ERV--SESNSLV 46 (416) Q Consensus 1 m~~~~~f~~~~~~~-----------------~~~~~~~~~~~~------~~~~~~------~~~~---~~~--~~~~a~~ 46 (416) |-+.+++.--.... ............ ...... ...+ ... .+..=+. T Consensus 1 ~~~~~~~~~~~~~~~~~e~i~~~i~~~~~~~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 80 (474) T protein:vir:10 1 MTLYKLIDDIEAQGILPKHIEALIESHKDDRERMVNLYNRYKTHIDYVPIFKRRPIEEKEDFETGGNVRRLDVSVNNKLN 80 (474) T ss_pred CchHHHHhhccccCCCHHHHHHHHHHhhhhhHHHHHHHHHHhhhcchhhhhcchhhhhhhhhhhcccccccccCcccccc Confidence 43333332110000 000000000000 000000 0000 000 0000123 Q ss_pred cHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCc Q lcl|Aclame:pro 47 QPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGY 126 (416) Q Consensus 47 ~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~ 126 (416) ++....+|+..+.-+-+-|+.+.-.++.... ..+..++.+-............+..+++.+|.||.++..+..|+ T Consensus 81 ~n~~~~ivd~~~~yl~g~pv~~~~~~~~~~~-----e~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~ 155 (474) T protein:vir:10 81 NSFDSEIVDTRVGYLHGVPVTYDLDENAEKN-----EKLKKFITNFAIRNSVDDEDSEIGKMAAICGYGARLAYIDTNGD 155 (474) T ss_pred cchHHHHHHhHhhheeccceeEeeCCCCcch-----HHHHHHHHHHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCe Confidence 5567778888888888888876443222111 11111212222223455678888899999999999998888887 Q ss_pred EEEEEeeccceEEEEEcCCCcEEE----EEEeeC-C-e---eEEe-chhheeeeccC------------------C---- Q lcl|Aclame:pro 127 PEALFPLRPDYTNAYVHPTTGMLW----YQTVLN-G-K---AIEL-YDYEVLHFKGL------------------S---- 174 (416) Q Consensus 127 ~~~l~~l~p~~v~~~~~~~~~~~~----~~~~~~-~-~---~~~~-~~~~vih~~~~------------------~---- 174 (416) + .+..++|..+-+..++.+...+ |..... + . .+.+ .+..+++++.. + T Consensus 156 ~-~~~~i~p~~~~~v~d~~~~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~ 234 (474) T protein:vir:10 156 I-RIKNIDPYNVIFVGDNILEPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPLFGV 234 (474) T ss_pred e-EEEEEcccceEEEEcCCCceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccceEEe Confidence 5 6777888888777766554321 111110 0 0 0111 11222221110 0 Q ss_pred CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEec Q lcl|Aclame:pro 175 TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSI 254 (416) Q Consensus 175 ~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~ 254 (416) .+...|.|.++.+...++....+.....+.+...+.|-.+++- ...+++....+ ...+.+.+.+++.++..+ T Consensus 235 ~n~~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~l~i~g-~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l 306 (474) T protein:vir:10 235 PNNKEMIGDAEKVIHLIDAYDLTMSDASSEISQTRLAYLVLRG-MGMSEEMIQET-------QKSGAFELFDKDMDVKYL 306 (474) T ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhcc-CCCCchhhhhh-------hhcceeEecCCCCceeEE Confidence 1223578888888777777776666666666666667666643 23344333322 234555666777777777 Q ss_pred cCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 255 SMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVK 322 (416) Q Consensus 255 ~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~ 322 (416) ........+.+..+...+.|+..-++|..-.+... |+-|... ......+..++.-.++.|...++.+ T Consensus 307 ~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~l~~~ 385 (474) T protein:vir:10 307 TKDVNDTMIENHLDRIEKNIMRFAKSVNFNSDEFN-GNVPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVILSALKRK 385 (474) T ss_pred eccCCHHHHHHHHHHHHHHHHHHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc Confidence 66666667778888899999999999865433221 2222111 1222345555555555555555443 Q ss_pred hcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCcccccccccccc Q lcl|Aclame:pro 323 LFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQR 400 (416) Q Consensus 323 l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~ 400 (416) -..... .....+.+.+..-+..|..+.++.+.++ .|+++..-+.+++++-+.+. .+++--- ..+....... T Consensus 386 ~~~~~~-~~~~~i~~~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v~d~~~E~eri~~E----~~e~~~~~~~ 458 (474) T protein:vir:10 386 GYNLDD-DSYLNLIFKFTRNIPVNKLEESQVLINL--KGQVSERTRLGQSQLVDDVDYELDEMEKE----SLEFNDKLPD 458 (474) T ss_pred cCCCCc-cccccceEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHH----HHHHHhhccc Confidence 111110 1112355666777788999999999988 58999988888886533211 0111000 0000000001 Q ss_pred ccCCcccCCCCccCCC Q lcl|Aclame:pro 401 LKAGGAMKGGDNKNEG 416 (416) Q Consensus 401 ~~~~~~~~gge~~~~~ 416 (416) . .++..++++++++| T Consensus 459 ~-~~~~~~~~~~~~~s 473 (474) T protein:vir:10 459 I-DEGDANDKSQNNQS 473 (474) T ss_pred c-cCCCcCCCCccccC Confidence 1 11223334445555 No 157 >protein:vir:94101 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1494 # MgeName: 96 # Cross-refs: genbank:acc:YP_240229;genbank:gi:66395892;genbank:GeneID:5133270 Probab=98.73 E-value=8e-08 Score=59.49 Aligned_cols=393 Identities=11% Similarity=0.052 Sum_probs=196.0 Q ss_pred Ccchhhhccccccc-----------------cccccchhHHHh------hhcCcc------cccc---ccc--cHHHHhc Q lcl|Aclame:pro 1 MLLERMFEKRSGSS-----------------DHEDGFNNILLN------MFGGRK------TASG---ERV--SESNSLV 46 (416) Q Consensus 1 m~~~~~f~~~~~~~-----------------~~~~~~~~~~~~------~~~~~~------~~~~---~~~--~~~~a~~ 46 (416) |-+.+++.--.... ............ ...... ...+ ... .+..=+. T Consensus 1 ~~~~~~~~~~~~~~~~~e~i~~~i~~~~~~~~r~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~ 80 (474) T protein:vir:94 1 MTLYKLIDDIEAQGILPKHIEALIESHKDDRERMVNLYNRYKTHIDYVPIFKRRPIEEKEDFETGGNVRRLDVSVNNKLN 80 (474) T ss_pred CchHHHHhhccccCCCHHHHHHHHHHhhhhhHHHHHHHHHHhhhcchhhhhcchhhhhhhhhhhcccccccccCcccccc Confidence 43333332110000 000000000000 000000 0000 000 0000123 Q ss_pred cHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCc Q lcl|Aclame:pro 47 QPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGY 126 (416) Q Consensus 47 ~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~ 126 (416) ++....+|+..+.-+-+-|+.+.-.++.... ..+..++.+-............+..+++.+|.||.++..+..|+ T Consensus 81 ~n~~~~ivd~~~~yl~g~pv~~~~~~~~~~~-----e~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~ 155 (474) T protein:vir:94 81 NSFDSEIVDTRVGYLHGVPVTYDLDENAEKN-----EKLKKFITNFAIRNSVDDEDSEIGKMAAICGYGARLAYIDTNGD 155 (474) T ss_pred cchHHHHHHhHhhheeccceeEeeCCCCcch-----HHHHHHHHHHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCe Confidence 5567778888888888888876443222111 11111212222223455678888899999999999998888887 Q ss_pred EEEEEeeccceEEEEEcCCCcEEE----EEEeeC-C-e---eEEe-chhheeeeccC------------------C---- Q lcl|Aclame:pro 127 PEALFPLRPDYTNAYVHPTTGMLW----YQTVLN-G-K---AIEL-YDYEVLHFKGL------------------S---- 174 (416) Q Consensus 127 ~~~l~~l~p~~v~~~~~~~~~~~~----~~~~~~-~-~---~~~~-~~~~vih~~~~------------------~---- 174 (416) + .+..++|..+-+..++.+...+ |..... + . .+.+ .+..+++++.. + T Consensus 156 ~-~~~~i~p~~~~~v~d~~~~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~ 234 (474) T protein:vir:94 156 I-RIKNIDPYNVIFVGDNILEPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPLFGV 234 (474) T ss_pred e-EEEEEcccceEEEEcCCCceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccceEEe Confidence 5 6777888888777766554321 111110 0 0 0111 11222221110 0 Q ss_pred CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEec Q lcl|Aclame:pro 175 TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSI 254 (416) Q Consensus 175 ~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~ 254 (416) .+...|.|.++.+...++....+.....+.+...+.|-.+++- ...+++....+ ...+.+.+.+++.++..+ T Consensus 235 ~n~~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~l~i~g-~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l 306 (474) T protein:vir:94 235 PNNKEMIGDAEKVIHLIDAYDLTMSDASSEISQTRLAYLVLRG-MGMSEEMIQET-------QKSGAFELFDKDMDVKYL 306 (474) T ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhcc-CCCCchhhhhh-------hhcceeEecCCCCceeEE Confidence 1223578888888777777776666666666666667666643 23344333322 234555666777777777 Q ss_pred cCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 255 SMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVK 322 (416) Q Consensus 255 ~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~ 322 (416) ........+.+..+...+.|+..-++|..-.+... |+-|... ......+..++.-.++.|...++.+ T Consensus 307 ~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~l~~~ 385 (474) T protein:vir:94 307 TKDVNDTMIENHLDRIEKNIMRFAKSVNFNSDEFN-GNVPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVILSALKRK 385 (474) T ss_pred eccCCHHHHHHHHHHHHHHHHHHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc Confidence 66666667778888899999999999865433221 2222111 1222345555555555555555443 Q ss_pred hcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCcccccccccccc Q lcl|Aclame:pro 323 LFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQR 400 (416) Q Consensus 323 l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~ 400 (416) -..... .....+.+.+..-+..|..+.++.+.++ .|+++..-+.+++++-+.+. .+++--- ..+....... T Consensus 386 ~~~~~~-~~~~~i~~~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v~d~~~E~eri~~E----~~e~~~~~~~ 458 (474) T protein:vir:94 386 GYNLDD-DSYLNLIFKFTRNIPVNKLEESQVLINL--KGQVSERTRLGQSQLVDDVDYELDEMEKE----SLEFNDKLPD 458 (474) T ss_pred cCCCCc-cccccceEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHH----HHHHHhhccc Confidence 111110 1112355666777788999999999988 58999988888886533211 0111000 0000000001 Q ss_pred ccCCcccCCCCccCCC Q lcl|Aclame:pro 401 LKAGGAMKGGDNKNEG 416 (416) Q Consensus 401 ~~~~~~~~gge~~~~~ 416 (416) . .++..++++++++| T Consensus 459 ~-~~~~~~~~~~~~~s 473 (474) T protein:vir:94 459 I-DEGDANDKSQNNQS 473 (474) T ss_pred c-cCCCcCCCCccccC Confidence 1 11223334445555 No 158 >protein:vir:99522 Length: 470 # NCBI annotation: putative protein # Family: family:all:125 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958533;genbank:gi:41179315;genbank:GeneID:2717160 Probab=98.71 E-value=2.2e-08 Score=62.59 Aligned_cols=383 Identities=12% Similarity=0.069 Sum_probs=185.5 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccc---cccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcce Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKT---ASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIE 77 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 77 (416) ++.+-+-+.+..... -...+..++-+... ........+.-+.++....+|+..+..+-.-|+.+...+++... T Consensus 29 ~i~~~i~~~~~~~~~----~~~~l~~Yy~g~~~i~~~~~~~~~~~~ki~~n~~~~Ivd~~~~~l~g~p~~~~~~~d~~~~ 104 (470) T protein:vir:99 29 ELLGFIAYNETVLKP----RYRENMKLYLGKHKILTAPEKETGADNRIVVNSAKYVVDVYNGYFCGIEPKLALLNDSSKI 104 (470) T ss_pred HHHHHHHHHHHhhHH----HHHHHHHHhccccccccCcccccCCcceeecchHHHHHHHHhhhhccCCeeEeeCCchhHH Confidence 111100000000000 00111122211110 00000001111234567778888888887778775432222110 Q ss_pred eeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcE--E----EE Q lcl|Aclame:pro 78 RKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGM--L----WY 151 (416) Q Consensus 78 ~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~--~----~~ 151 (416) ..+.. ++.+ -........+..+.+.+|.+|.++..++.|.+ .+..++|..+.+..++.... . +| T Consensus 105 ----~~l~~-~~~~----n~~~~~~~~~~~~~~~~G~~~~~v~~d~dg~~-~i~~~~p~~~~~i~d~~~~~~~~~~vr~~ 174 (470) T protein:vir:99 105 ----DEIAR-WNRQ----ENFFDTINEISKQCDIFGRSIASIYQGEDARP-HLMYSSPNHAFIIYDDTVQRQPLAFVHYQ 174 (470) T ss_pred ----HHHHH-HHHh----cCHhHHHHHHHHHHHhcCeeEEEEEeCCCCeE-EEEEEccceeEEEEcCCCCcceEEEEEEE Confidence 11222 2222 25567788899999999999999999888876 57778999988887765421 1 11 Q ss_pred EEeeCCee----EEechhheeeeccC-------------------C----CCccccccHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 152 QTVLNGKA----IELYDYEVLHFKGL-------------------S----TDGIHGKSPIGVVREHIGAQAAATKYNAKL 204 (416) Q Consensus 152 ~~~~~~~~----~~~~~~~vih~~~~-------------------~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~ 204 (416) ........ ..+..+.+++++.. + .+...|.|.+..+...++............ T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa~~~~~s~~~~~ 254 (470) T protein:vir:99 175 IDNSNNWTDAYGVIQYADKFYKFKGYDIEEDTNAAGYAINPYGLVPAVEFFENEERQGIFDSIKTLINALDKVISQKANQ 254 (470) T ss_pred EEecCCeeEEEEEEEecCeEEEEEecccccccccccccccCCCccceEeecCCCCCCcchHhHHHHHHHHHHHHHHHHHH Confidence 11111110 01122222222100 0 123458888888888888777777777777 Q ss_pred HhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeec-----CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 205 YKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAII-----DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYK 279 (416) Q Consensus 205 ~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl-----~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~g 279 (416) +...+.|-.+++--....++..+.++ .+ ...+++.+ +++.++..+........+.+..+...+.|+.+-+ T Consensus 255 ~~~~~~~~~~i~g~~~~~~~~g~~~~-~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~ 329 (470) T protein:vir:99 255 VEYFDNAYMYMIGFKLPEDDEGNPKF-DF----KNNRVLYVSQLDPDTNPQIGFIAKPDADQMQENLIQHLTDFIFMMAM 329 (470) T ss_pred HHHhcCceeeeecCCcccccccchhh-hh----hhcceeeecCCCCCCCCcceEEeecCChHHHHHHHHHHHHHHHHHhC Confidence 77777787777653322222222221 11 11223322 2345555566555556666778889999999999 Q ss_pred cchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccH Q lcl|Aclame:pro 280 VPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDS 347 (416) Q Consensus 280 vp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~ 347 (416) +|..-.+.. .|+-|... +.....+..+|.-+++.+...+..+--... ....+.+.+..-+..+. T Consensus 330 ~p~~~~~~~-~~n~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~---~~~~i~v~f~~~~p~~~ 405 (470) T protein:vir:99 330 VPNIQDKNF-AGNSSGVALQYKLFAMKNKADSKERKFDKSLMQLYRIVLATLFNNKQDQE---LWSELDFKFTRNLPEDM 405 (470) T ss_pred Ccccccccc-ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccc---ccccceEEeCCCCCcCH Confidence 996544322 22222111 112233444444444444444433221111 12345555667778889 Q ss_pred HHHHHHHHHHHhCCCcCHHHHHHHhCCCC-CCCCCeEeeccCcccccccccc-ccccCCcccC----CCCccCC Q lcl|Aclame:pro 348 KTQAEYLKTLHETGVLNKDEIRELLERNP-IENGDKYISSLNYVFLDFLEEY-QRLKAGGAMK----GGDNKNE 415 (416) Q Consensus 348 ~~~~~~~~~~~~~g~~t~NE~R~~~gl~p-~~ggd~~~~~~n~~~~~~~~~~-~~~~~~~~~~----gge~~~~ 415 (416) .+.++.+.++. |+++.-.+.++++.-. ....+.+. .+..... ...+.....+ .++.++| T Consensus 406 ~e~a~~~~kl~--giis~et~l~~l~~vd~~~E~eri~-------~E~~~~~~~~~~~~~~~d~~~~d~~~ee~ 470 (470) T protein:vir:99 406 ASAIDNAKNAE--GIVSKKTQLGMIPDIEPDAEMKQIA-------KEKADAIKQTQQLSMPIDILKRDNNAEEE 470 (470) T ss_pred HHHHHHHHHHh--ccCCHHHHHHhCCCCCHHHHHHHHH-------HHHHHHHHHHHhhcCCCCcCCCCCCccCC Confidence 99999999884 8899988888775421 00001100 0000000 0001111111 1122222 No 159 >protein:vir:95806 Length: 440 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1578 # MgeName: SMP # Cross-refs: genbank:acc:YP_950583;genbank:gi:119953778;genbank:GeneID:5076876 Probab=98.70 E-value=4.5e-08 Score=60.88 Aligned_cols=387 Identities=9% Similarity=0.002 Sum_probs=190.7 Q ss_pred cchhhhccccccccccccchhHHHhhhcCcccc---cc---ccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCc Q lcl|Aclame:pro 2 LLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA---SG---ERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG 75 (416) Q Consensus 2 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 75 (416) |+..+...+.. . ...+..++-+.... .. ..-....-+........|+..+.-+-+-|+.+...+.+ T Consensus 1 ~~~~~~~~~~~---r----~~~l~~yy~g~~~~~~~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~~~~- 72 (440) T protein:vir:95 1 MLAAFLGSQKQ---R----LAILASYAQGDNFSILSGHRRLDDEKADYRVRHKWGGYISSFATGYVIGNPVSIGVMEGG- 72 (440) T ss_pred ChhhHHHHHHH---H----HHHHHHHhccCCcccccccccccccCCcceeecchHHHHHHhhhhheeccCceEeeCCCc- Confidence 44433332111 0 01112222111100 00 00000111345566777888888877777775432211 Q ss_pred ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCc--EEE--- Q lcl|Aclame:pro 76 IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTG--MLW--- 150 (416) Q Consensus 76 ~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~--~~~--- 150 (416) ... ....| .+-...-........+..+.+.+|.+|.++..++.|.+ .+..++|..+.+..++... ..+ T Consensus 73 ~~~-----~~~~l-~~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~i~~~~p~~~~~~~d~~~~~~~~~~i~ 145 (440) T protein:vir:95 73 SAD-----QLSTI-KDIEWQNDINALNSDLAFDASVYGRAYEYHFRDKDKVD-RVVLISPLEMFVIRDLTVEQNIIAAVH 145 (440) T ss_pred cHH-----HHHHH-HHHHHhcCHhHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEEcCCCCCceEEEEE Confidence 111 11111 11111123445667788899999999999999988876 4677889999988876542 211 Q ss_pred EEEeeCCeeE-EechhheeeeccC--------------------C----CCccccccHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 YQTVLNGKAI-ELYDYEVLHFKGL--------------------S----TDGIHGKSPIGVVREHIGAQAAATKYNAKLY 205 (416) Q Consensus 151 ~~~~~~~~~~-~~~~~~vih~~~~--------------------~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~ 205 (416) +......... .+.++.+++.+.. + .+...|.|.++.+...++..........+.+ T Consensus 146 ~~~~~~~~~~~vyt~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~lida~~~~~s~~~~~~ 225 (440) T protein:vir:95 146 LPIYADKVNMTVYTKDKVITYKPYSNNSVRLVVDDVKKHSYNDVPVVEWWNNRFRMGDYESEISLIDAYDAGQSDTANYM 225 (440) T ss_pred EEEecCceEEEEEeCCeEEEEEEecCCccceeecceeeccCceeeEEEeeCCCCCCCchhhhHHHHHHHHHHHHHHHHHH Confidence 1111111111 1222222222100 0 1123578888888888777777777777777 Q ss_pred hccCCcceeeccC---CcCCHHHHHHHHHHHHH-hhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 206 KNEATPRGILKVP---AFLDEKPKENVRKEWKR-VNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVP 281 (416) Q Consensus 206 ~n~~~~~~v~~~~---~~~~~e~~~~~~~~~~~-~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp 281 (416) +..+.|-.+++.. ...+++....+++.-.- ..........+++.++..+........+....+...+.|+..-++| T Consensus 226 ~~~~~~~~v~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~l~~~i~~~s~~p 305 (440) T protein:vir:95 226 SDLNDAMLLVKGDLDGIKLSPEDAAKMKDANMLFLKTGISTTGQQTTADASYIYKQYDVNGTEAYKNRLANDIHRFSRIP 305 (440) T ss_pred HHhhcceeeeecccccCCCCccchhhhhhccceecccccccccCCCCcceeEEeecCCHHHHHHHHHHHHHHHHHHhCCc Confidence 7777787777642 23355555544332111 1111111222334444445444455566778888899999999998 Q ss_pred hhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHH Q lcl|Aclame:pro 282 LHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKT 349 (416) Q Consensus 282 ~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~ 349 (416) ..-.+... ++-|.. .......+...+..+++.|...++..--.. .....+.+.+..-...+..+ T Consensus 306 ~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~~---~~~~~v~i~f~~~~p~~~~~ 381 (440) T protein:vir:95 306 NLDDDRFN-STSSGIALLYKMIGLEQVRKDKETYFTKALRRRYELISNIHKAINGPV---IEANKLTFTFHPNIPQDVWT 381 (440) T ss_pred cccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc---cccccceEEeCCCCCCCHHH Confidence 74443221 221111 111223344445555555555444321111 11234556667778889999 Q ss_pred HHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccccc-ccccccccCCcccCCCCccCC Q lcl|Aclame:pro 350 QAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDF-LEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 350 ~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~-~~~~~~~~~~~~~~gge~~~~ 415 (416) .++.+.++ +|+++.--+.++++.-..+ +++-. ...+. ....+..+..+..+++..++| T Consensus 382 ~ad~~~kl--~g~iS~et~~~~l~~~d~~--~E~~r----i~~E~~~~~~~~~~~~~~~~~~~~~~e 440 (440) T protein:vir:95 382 EIKAYIEA--GGEISQETLMENASFTDYK--TEHSR----ILKQGGSSDLEIGQIVGDADVGQADTE 440 (440) T ss_pred HHHHHHHH--hccCcHHHHHHhCCCCCcH--HHHHH----HHHHHHHhhhhHHhhccCCCCCCcCCC Confidence 99999988 6889987777777542111 11100 00001 111111222222334444444 No 160 >protein:vir:4223 Length: 486 # NCBI annotation: predicted 53.7Kd protein # Family: family:all:524 # MgeID: mge:89 # MgeName: L5 # Cross-refs: genbank:acc:NP_039678;swissprot:sw:q05220;genbank:gi:9625444;uniprot:Q05220;genbank:GeneID:2942930;interpro:IPR010859 Probab=98.70 E-value=6.6e-08 Score=59.97 Aligned_cols=388 Identities=12% Similarity=0.038 Sum_probs=166.8 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccc--ccccc---HHHHhccHHHHHHHHHHHHhhccCcceEEeecCCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTAS--GERVS---ESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG 75 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 75 (416) .++.++.......... ...+..++-|..... +..+- .+......+..-+|+.++..+--..|.+ .++. T Consensus 16 ~~~~~l~~~~~~~~~r----~~~l~~YY~G~~~i~~~~~~~~~~~~~~~~v~n~~~~iVd~~~~~l~~~g~~~---~~~~ 88 (486) T protein:vir:42 16 VVREEMISAFEDASKD----LASNTSYYDAERRPEAIGVTVPREMQQLLAHVGYPRLYVDSVAERQAVEGFRL---GDAD 88 (486) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHhcccCcchhcccccchhHhhhhhccchHHHHHHHHHhhhcccceec---CCCc Confidence 2222222211110000 001111111211110 00110 0111123456677777776664444432 1111 Q ss_pred ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcE-------EEEEeeccceEEEEEcCCCcE Q lcl|Aclame:pro 76 IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYP-------EALFPLRPDYTNAYVHPTTGM 148 (416) Q Consensus 76 ~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~-------~~l~~l~p~~v~~~~~~~~~~ 148 (416) . .......++.+ |. .......+..+++.+|.||+++.++..|.. ..+.+++|..+.+.+++..+. T Consensus 89 ~----~~~~~~~i~~~-N~---~d~~~~~~~~~a~~~G~ay~~v~~~e~~~~~~~~~~~~~i~~~~p~~~~~i~d~~~~~ 160 (486) T protein:vir:42 89 E----ADEELWQWWQA-NN---LDIEAPLGYTDAYVHGRSFITISKPDPQLDLGWDQNVPIIRVEPPTRMHAEIDPRINR 160 (486) T ss_pred h----hHHHHHHHHHh-cC---hhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCeeEEEEecccceEEEEeCCCCC Confidence 0 11222333333 22 345677889999999999999987654422 366778888888777643221 Q ss_pred EEE----EEeeCCeeE----Eech-------------------------hheeeeccCC-CCccccccHHHH-HHHHHHH Q lcl|Aclame:pro 149 LWY----QTVLNGKAI----ELYD-------------------------YEVLHFKGLS-TDGIHGKSPIGV-VREHIGA 193 (416) Q Consensus 149 ~~~----~~~~~~~~~----~~~~-------------------------~~vih~~~~~-~~~~~G~s~~~~-~~~~i~~ 193 (416) ..+ .+...++.+ .+.+ =.|+++.+.. ..+.+|.|.++. +...++. T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~~~n~~~~~~~~G~s~i~~~v~~liDa 240 (486) T protein:vir:42 161 VSKAIRVAYDKEGNEIQAATLYTPMETIGWFRADGEWAEWFNVPHGLGVVPVVPLPNRTRLSDLYGTSEITPELRSMTDA 240 (486) T ss_pred eEEEEEEEEecCCCeEEEEEEEcCCcEEEEEecCCcEEeecceecCCCCceEEEeccccccCCCCCcccchhhHHHHHHH Confidence 110 000001000 0111 1344444332 234567776552 2233333 Q ss_pred HHHHHHHHHHHHhccCCcceeeccCC--cCCHHHHHHHHHHHHHhhcCCceeecC-CCceeEeccCChhhHHHHHHHHHH Q lcl|Aclame:pro 194 QAAATKYNAKLYKNEATPRGILKVPA--FLDEKPKENVRKEWKRVNKVENIAIID-YGLEYQSISMPLQEAQFVESMKFN 270 (416) Q Consensus 194 ~~~~~~~~~~~~~n~~~~~~v~~~~~--~~~~e~~~~~~~~~~~~~~~~~~~vl~-~g~~~~~~~~~~~d~~~~e~~~~~ 270 (416) .............-.+.|..++.-.. ....+. .+-+..|.. ..+.+++++ ++.++.++....- -.+++..+.. T Consensus 241 ~~~~~s~~~~~~e~~a~p~~~i~G~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~q~~~~~~-e~~~~~l~~~ 316 (486) T protein:vir:42 241 AARILMLMQATAELMGVPQRLIFGIKPEEIGVDS-ETGQTLFDA--YLARILAFEDAEGKIQQFSAAEL-ANFTNALDQI 316 (486) T ss_pred HHHHHHHHHHHHHhhcchHHHhhcCCcccccccc-ccccchhhh--hhchhcccCCCCceEEeecccCH-HHHHHHHHHH Confidence 33322233333334444554444211 111000 001111211 123455554 5667766554322 2467888888 Q ss_pred HHHHHHHhccchhhcccccCCCcccHHH-------------HHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhh Q lcl|Aclame:pro 271 KAQISMIYKVPLHKLNELDKATFSNIEH-------------QSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKF 337 (416) Q Consensus 271 ~~~Ia~~~gvp~~~lg~~~~~~~s~~e~-------------~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f 337 (416) ...++..-++|+..+|....+ .++.+. .....+..+|.-+++.+....+..-.+ .....+++ T Consensus 317 i~~~s~~~~~p~~~fg~~~~n-~~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~~~~~~~----~d~~~i~v 391 (486) T protein:vir:42 317 AKQVAAYTGLPPQYLSTAADN-PASAEAIRAAESRLIKKVERKNLMFGGAWEEAMRIAYRIMKGGDVP----PDMLRMET 391 (486) T ss_pred HHHHhcccCCCHHHhccccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc----ccceeeeE Confidence 888988899999998754321 111111 112222333333333322221111000 11123444 Q ss_pred hhhhhhhccHHHHHHHHHHHHhC--CCcCHHHHHHHhCCCCCCC--CCeE--------eeccCcc-ccc-------cccc Q lcl|Aclame:pro 338 NIDSELRGDSKTQAEYLKTLHET--GVLNKDEIRELLERNPIEN--GDKY--------ISSLNYV-FLD-------FLEE 397 (416) Q Consensus 338 ~~~~l~~~d~~~~~~~~~~~~~~--g~~t~NE~R~~~gl~p~~g--gd~~--------~~~~n~~-~~~-------~~~~ 397 (416) .+......+..+.++++.+++++ |+++..-+++.+|+.+.+- ..++ ....+.. ..+ ..++ T Consensus 392 ~w~~~~~~s~~~~ad~~~kl~~~~~g~~s~et~~~~lg~~~d~~~e~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (486) T protein:vir:42 392 VWRDPSTPTYAAKADAATKLYGNGQGVIPRERARIDMGYSVKEREEMRRWDEEEAAMGLGLLGTMVDADPTVPGSPSPTA 471 (486) T ss_pred EecCCCCCCHHHHHHHHHHHHhcccCCCCHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCC Confidence 55566778899999999999876 7888888888888865421 1110 0000000 000 0000 Q ss_pred cccccCCcccCCCCc Q lcl|Aclame:pro 398 YQRLKAGGAMKGGDN 412 (416) Q Consensus 398 ~~~~~~~~~~~gge~ 412 (416) +...+...+..||+. T Consensus 472 ~~~~~~~~~~~~~~~ 486 (486) T protein:vir:42 472 PPKPQPAIESSGGDA 486 (486) T ss_pred CCCCCcccCCCCCCC Confidence 000101111122222 No 161 >protein:vir:2427 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:52 # MgeName: D29 # Cross-refs: genbank:acc:NP_046829;genbank:gi:9630397;genbank:GeneID:1261620 Probab=98.70 E-value=1.1e-08 Score=64.21 Aligned_cols=391 Identities=13% Similarity=0.070 Sum_probs=168.7 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--cccccc---HHHHhccHHHHHHHHHHHHhhccCcceEEeecCCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGERVS---ESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG 75 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 75 (416) +.+..+.++........ ..+..++-|.... .+..+. ++....+.+...+|+..+..+.-.+|.+- ++. T Consensus 16 ~~~~~L~~~~~~~~~r~----~~~~~YY~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~~---~~~ 88 (485) T protein:vir:24 16 IARDEMVSAFEDQNQNL----RSNTSYYEAERRPEAIGVTVPVQMQSLLAHVGYPRLYVDSIAERQAVEGFRLG---DAD 88 (485) T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHhccCchhhcCcccchhhhhhhhccchHHHHHHHHhhhhccCceecC---CCc Confidence 22222222111100000 0011111111110 000000 11112234556667766666544444321 111 Q ss_pred ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcE-------EEEEeeccceEEEEEcCCCcE Q lcl|Aclame:pro 76 IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYP-------EALFPLRPDYTNAYVHPTTGM 148 (416) Q Consensus 76 ~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~-------~~l~~l~p~~v~~~~~~~~~~ 148 (416) . .+..+ ..++.. | ........+..+++.+|.||+++.+++.+.+ ..+.+++|..+.+.+++..+. T Consensus 89 ~---~~~~l-~~i~~~-N---~~d~~~~~~~~~a~i~G~ay~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~~i~D~~~~~ 160 (485) T protein:vir:24 89 E---ADEEL-WQWWQA-N---NLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNVPLIRVEPPTRMYAEIDPRIGR 160 (485) T ss_pred h---hHHHH-HHHHHh-c---ChhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCcceEEEeccceeEEEeeCCcCc Confidence 0 11112 223222 2 3446788999999999999999988765433 257788888888777654321 Q ss_pred EEE--E--EeeCC------------eeEE-----------------echhheeeeccCC-CCccccccHHHH-HHHHHHH Q lcl|Aclame:pro 149 LWY--Q--TVLNG------------KAIE-----------------LYDYEVLHFKGLS-TDGIHGKSPIGV-VREHIGA 193 (416) Q Consensus 149 ~~~--~--~~~~~------------~~~~-----------------~~~~~vih~~~~~-~~~~~G~s~~~~-~~~~i~~ 193 (416) ..+ . +...+ ..+. +..=.|+|+++.. ..+.+|.|.+.. +...++. T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~~G~s~i~~~v~~liDa 240 (485) T protein:vir:24 161 PAKAIRVAYDAEGNEIQAATLYTPNETFGWFRAEGEWVEWFSDPHGLGAVPVVPLPNRTRLSDLYGTSEITPELRSMTDA 240 (485) T ss_pred eeEEEEEEEeecCCeEEEEEEEcCCcEEEEEecCCceEeecccccCCCcccEEEeccCcccCCcCCcccchhhHHHHHHH Confidence 110 0 00000 0000 1112355565432 245678876653 3344443 Q ss_pred HHHHHHHHHHHHhccCCcceeeccCCcCCHHHHH--HHHHHHHHhhcCCceeecC-CCceeEeccCChhhHHHHHHHHHH Q lcl|Aclame:pro 194 QAAATKYNAKLYKNEATPRGILKVPAFLDEKPKE--NVRKEWKRVNKVENIAIID-YGLEYQSISMPLQEAQFVESMKFN 270 (416) Q Consensus 194 ~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~--~~~~~~~~~~~~~~~~vl~-~g~~~~~~~~~~~d~~~~e~~~~~ 270 (416) ......-......-.+.|..++.--. ......+ .-...|+ ...+.+++++ ++.++.++..+.-+ .+++..+.. T Consensus 241 ~~~~~s~~~~~~~~~a~p~~~i~G~~-~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~q~~~~~~e-~~~~~l~~~ 316 (485) T protein:vir:24 241 AARILMLMQATAELMGVPQRLIFGIK-PEEIGVDPETGQTLFD--AYLARILAFEDAEGKIQQFSAAELA-NFTNALDQI 316 (485) T ss_pred HHHHHHHHHHHHHhhcchhhhhccCC-ccccccccccccchhh--hcccceeccCCCCceEEeecccchH-HHHHHHHHH Confidence 33333333333444455655554211 1100000 0011111 1233455554 56777666543322 467778888 Q ss_pred HHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHH----HHHHhh------cCchh-cccccchhhhh Q lcl|Aclame:pro 271 KAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQ----ELNVKL------FLDHD-QKSGHYVKFNI 339 (416) Q Consensus 271 ~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~----~l~~~l------~~~~~-~~~~~~~~f~~ 339 (416) ...++..-++|+..+|....+ .++ ..+. .+....|.-.+...+. .|.+.+ ....+ ......+++.+ T Consensus 317 i~~~s~~~~~p~~~fg~~~~n-~~S-g~Al-~~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~~~~~~~~d~~~i~v~f 393 (485) T protein:vir:24 317 AKQVAAYTGLPPQYLSTAADN-PAS-AEAI-RAAESRLIKKVERKNAIFGGAWEEAMRLAYRLMKGGDVPPDMLRMETVW 393 (485) T ss_pred HHHHhcccCCCHHHhccccCc-chH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeEEe Confidence 888888889999999754321 111 1221 1222222222222222 221111 00000 01112344445 Q ss_pred hhhhhccHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC--CCCeEeec---cCcccccccccc-----------ccc Q lcl|Aclame:pro 340 DSELRGDSKTQAEYLKTLHETG--VLNKDEIRELLERNPIE--NGDKYISS---LNYVFLDFLEEY-----------QRL 401 (416) Q Consensus 340 ~~l~~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~gl~p~~--ggd~~~~~---~n~~~~~~~~~~-----------~~~ 401 (416) ......+..+.++.+.+++.+| +++..-+++++|+.+.+ ...++.-- .+...++..... +.+ T Consensus 394 ~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~l~~~~d~~~e~~~~~ee~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 473 (485) T protein:vir:24 394 RDPSTPTYAAKADAATKLYGNGQGVIPRERARKDMGYSIAEREEMRRWDEEEAAMGLGLLGTMVDADPTVPGSPNPTPAP 473 (485) T ss_pred cCCCCCCHHHHHHHHHHHHhcccccCCHHHHHhhCCCCHhHHHHHHHHHHHHhhhhhhHHHhhcccCCCCCCCCCCCCCC Confidence 5556778889999999998765 78888888888887542 11110000 000000000000 011 Q ss_pred cCCcccCCCCcc Q lcl|Aclame:pro 402 KAGGAMKGGDNK 413 (416) Q Consensus 402 ~~~~~~~gge~~ 413 (416) ....+..||++- T Consensus 474 ~~~~~~~~~~~a 485 (485) T protein:vir:24 474 KPQPAIEGGDSA 485 (485) T ss_pred CCccCCCCCCCC Confidence 111111122222 No 162 >protein:vir:93747 Length: 472 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1475 # MgeName: 55 # Cross-refs: genbank:acc:YP_240454;genbank:gi:66396119;genbank:GeneID:5133516 Probab=98.69 E-value=9.5e-08 Score=59.08 Aligned_cols=381 Identities=11% Similarity=0.040 Sum_probs=179.7 Q ss_pred Ccchhhhccc-cccccccccchhHHHhhhcCccc---------ccc--ccccHHHHhccHHHHHHHHHHHHhhccCcceE Q lcl|Aclame:pro 1 MLLERMFEKR-SGSSDHEDGFNNILLNMFGGRKT---------ASG--ERVSESNSLVQPDIFACVNVLSDDIAKLPIHT 68 (416) Q Consensus 1 m~~~~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 68 (416) ++..++..+. +.-..... -...+..++-+... ... .......-+..+....+|+..+..+-.-|+.+ T Consensus 23 ~~~~~~i~~~i~~~~~~~~-~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri~~n~~~~ivd~~~~~l~g~~~~~ 101 (472) T protein:vir:93 23 ETLEEMIVRYIKQHLEKLP-EISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKPIAF 101 (472) T ss_pred hhHHHHHHHHHHHHHHHHH-HHHHHHHHhccccccccccchhhccccccccccccccccchHHHHHHHHhhhhcccCeee Confidence 1111111110 00000000 00111122211100 000 00000111235677788999888887777765 Q ss_pred EeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC--C Q lcl|Aclame:pro 69 YKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT--T 146 (416) Q Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~--~ 146 (416) ...++ .. . ..+..++. | ........+..+.+.+|.||.++..++.|.+ .+..++|..+.+..++. + T Consensus 102 ~~~d~-~~----~-~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~d~~~-~i~~~~p~~~~~i~d~~~~~ 169 (472) T protein:vir:93 102 KHTDD-EV----V-KRIDEVLG--N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTDKEHE 169 (472) T ss_pred ccCCh-HH----H-HHHHHHHh--c---cHHHHHHHHHHHHhhcCeEEEEEEECCCCce-EEEEEcccceEEEEcCCCCC Confidence 32221 11 1 12222322 2 2345666678899999999999999888876 47778888888887642 2 Q ss_pred cEE----EEEEeeCCeeEEechhheeeecc----------------------C-----C----CCccccccHHHHHHHHH Q lcl|Aclame:pro 147 GML----WYQTVLNGKAIELYDYEVLHFKG----------------------L-----S----TDGIHGKSPIGVVREHI 191 (416) Q Consensus 147 ~~~----~~~~~~~~~~~~~~~~~vih~~~----------------------~-----~----~~~~~G~s~~~~~~~~i 191 (416) ... +|..........+.+..+.+++. . + .+...|.|.++.+...+ T Consensus 170 ~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~g~s~~e~v~~li 249 (472) T protein:vir:93 170 ELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYKTLI 249 (472) T ss_pred ceEEEEEEEEeecceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecCCCCCCCchhhhHHHH Confidence 211 11111111001111111111110 0 0 01346888888888888 Q ss_pred HHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHH Q lcl|Aclame:pro 192 GAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNK 271 (416) Q Consensus 192 ~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~ 271 (416) +....+.....+.+...+.|-.+++.-... ....+.+.+ ...+++.++++.+...+........+....+... T Consensus 250 Da~~~~~s~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 322 (472) T protein:vir:93 250 DAYNRRLSDLSNTFKDSNELTYVLTNYDDQ---ELPEFKRLL----RYYGAIKVSDNGGVDTIQVEVPVENSKKYLDELY 322 (472) T ss_pred HHHHHHHHHHHHHHHHhcCceeEeecCCcc---cchhhHHHH----hhccccccCCCCcceeEeecCCHHHHHHHHHHHH Confidence 777766666666777777787766532211 111222211 2334555666666665655566677788888899 Q ss_pred HHHHHHhccchhhcccccCCCcccHHH-------------HHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhh Q lcl|Aclame:pro 272 AQISMIYKVPLHKLNELDKATFSNIEH-------------QSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFN 338 (416) Q Consensus 272 ~~Ia~~~gvp~~~lg~~~~~~~s~~e~-------------~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~ 338 (416) +.|+..-++|..-.+... ++-|. ++ .....+...|.-+++.|...++. ... ...+.+. T Consensus 323 ~~i~~~s~~p~~~~~~~~-~n~Sg-~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~-----~~~--~~~i~v~ 393 (472) T protein:vir:93 323 QKIMLFGQAVDFSSDKFG-SAPSG-VALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDI-----KGE--HKDVDIS 393 (472) T ss_pred HHHHHHhCCCCCCccccc-cCchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----Ccc--cceeeEE Confidence 999999999865443221 22221 11 11223333344444444433321 111 2234444 Q ss_pred hhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCccccccccccccccCCcccCC--CCccC Q lcl|Aclame:pro 339 IDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQRLKAGGAMKG--GDNKN 414 (416) Q Consensus 339 ~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~~~~~~~~~g--ge~~~ 414 (416) ++.-+..|..+.++.+.++ .|+++.--+.+++++-..+. .+.+---. .+.....+....++..++ ++..+ T Consensus 394 f~~~~p~~~~~~~~~~~k~--~giis~et~l~~l~~~~d~~~E~~ri~~E~----~~~~~~~~~~~~~~~d~~~~~~~~~ 467 (472) T protein:vir:93 394 FNYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQ----MEYNKQLPNLDDGGADGAQQQERSN 467 (472) T ss_pred eCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHH----HHHHHhccCcCcccCCCCCCCCCCC Confidence 5667778899999998887 58999888888776533211 11100000 000000000001111111 11111 Q ss_pred CC Q lcl|Aclame:pro 415 EG 416 (416) Q Consensus 415 ~~ 416 (416) +. T Consensus 468 ~~ 469 (472) T protein:vir:93 468 NK 469 (472) T ss_pred cc Confidence 11 No 163 >protein:vir:2341 Length: 488 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:51 # MgeName: Bxb1 # Cross-refs: genbank:acc:NP_075278;genbank:gi:12657865;genbank:GeneID:920078 Probab=98.69 E-value=6.2e-08 Score=60.10 Aligned_cols=397 Identities=13% Similarity=0.054 Sum_probs=165.8 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--cccccc---HHHHhccHHHHHHHHHHHHhhccCcceEEeecCC- Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGERVS---ESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDG- 74 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~- 74 (416) .+++++........... ..+..++-+.... .+..+. .+.-....+...+|+.+++.+---.|.+-..... T Consensus 11 ~~i~~L~~~~~~~~~r~----~~~~~Yy~g~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~a~~l~~~Gf~~~~~~~~~ 86 (488) T protein:vir:23 11 KLRDQLLDAFENKQNEL----KSSKAYYDAERRPDAIGLAVPLDMRKYLAHVGYPRTYVDAIAERQELEGFRIPSANGEE 86 (488) T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHhcccchhhcCcccchhhhhhhhhcchHHHHHHHHHHhhhccceeccCCcccc Confidence 22222222111111100 0111111111100 001111 1111234556677777776554444443221110 Q ss_pred ---cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC--------CCcEEEEEeeccceEEEEEc Q lcl|Aclame:pro 75 ---GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS--------HGYPEALFPLRPDYTNAYVH 143 (416) Q Consensus 75 ---~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~--------~g~~~~l~~l~p~~v~~~~~ 143 (416) +........+.. ++.+. ........+..+++.+|.||.++..+. .|.+ .+.+++|..+.+..+ T Consensus 87 ~~~~~d~~~~~~l~~-i~~~N----~~~~~~~~~~~~a~i~G~a~~~v~~~~~~~~~~~~~~~~-~i~~~~p~~~~~~~d 160 (488) T protein:vir:23 87 PESGGENDPASELWD-WWQAN----NLDIEATLGHTDALIYGTAYITISMPDPEVDFDVDPEVP-LIRVEPPTALYAEVD 160 (488) T ss_pred cccccchhHHHHHHH-HHHhc----ChhHHHHHHHHHHhhcCceEEEEecCCcccccCCCCCcc-eEEEeccceeEEEEe Confidence 000011111222 22221 345677888899999999999986543 2222 466778877777766 Q ss_pred CCCcEEE----EEEeeCCe---------------------eEEe--------chhheeeeccCC-CCccccccHHHH-HH Q lcl|Aclame:pro 144 PTTGMLW----YQTVLNGK---------------------AIEL--------YDYEVLHFKGLS-TDGIHGKSPIGV-VR 188 (416) Q Consensus 144 ~~~~~~~----~~~~~~~~---------------------~~~~--------~~~~vih~~~~~-~~~~~G~s~~~~-~~ 188 (416) +..+... +.+...++ .+.+ ..=.|+++++.. ..+.+|.|.+.. +. T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~~G~s~i~~~v~ 240 (488) T protein:vir:23 161 PRTRKVLYAIRAIYGADGNEIVSATLYLPDTTMTWLRAEGEWEAPTSTPHGLEMVPVIPISNRTRLSDLYGTSEISPELR 240 (488) T ss_pred cCCCceEEEEEEEEecCCCcEEEEEEEecCcEEEEEecCCceEeccccccCCCCcceEEeccccccCCcCCccchhhhHH Confidence 4322111 00111110 0001 111355565432 235577776542 22 Q ss_pred HHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHH--HHHHHHHHhhcCCceeecCCC--ceeEeccCChhhHHHH Q lcl|Aclame:pro 189 EHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKE--NVRKEWKRVNKVENIAIIDYG--LEYQSISMPLQEAQFV 264 (416) Q Consensus 189 ~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~--~~~~~~~~~~~~~~~~vl~~g--~~~~~~~~~~~d~~~~ 264 (416) ..++..............-.+.|..++.-- ..++...+ .-...|+. ..+.++.+++| .++.++..+. --.++ T Consensus 241 ~l~Da~~~~~s~~~~~~~~~a~p~~~i~G~-~~~~~~~~~~~~~~~~~~--~~~~v~~~~~g~~~~~~q~~~~~-~~~~~ 316 (488) T protein:vir:23 241 SVTDAAAQILMNMQGTANLMAIPQRLIFGA-KPEELGINAETGQRMFDA--YMARILAFEGGEGAHAEQFSAAE-LRNFV 316 (488) T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHhCC-Ccccccccccccchhhhh--hhhhhccCCCCCCceeEecCCCC-hHHHH Confidence 333322222222222223233444433311 11110000 00111111 12346666655 4565554332 23477 Q ss_pred HHHHHHHHHHHHHhccchhhcccccCCCcccHHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhcCchhccc Q lcl|Aclame:pro 265 ESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ-------------SIEYVRNTLQPWIVNFEQELNVKLFLDHDQKS 331 (416) Q Consensus 265 e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~-------------~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~ 331 (416) +..+.....|+..-++|+..+|....+ .++.+.. ....+...|.-+++.+...++..-. ... T Consensus 317 ~~l~~~i~~~~~~~~~p~~~~g~~~~n-~~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~~~~~~----~~~ 391 (488) T protein:vir:23 317 DALDALDRKAASYSGLPPQYLSSSSDN-PASAEAIKAAESRLVKKVERKNKIFGGAWEQAMRLAYKMVKGGDI----PTE 391 (488) T ss_pred HHHHHHHHHHhcccCCCHHHhccccCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc----chh Confidence 888888999999999999999754321 1121111 1112222222222222221111000 011 Q ss_pred ccchhhhhhhhhhccHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCCC--CCeEeeccCc---cccccc--ccccccc Q lcl|Aclame:pro 332 GHYVKFNIDSELRGDSKTQAEYLKTLHETG--VLNKDEIRELLERNPIEN--GDKYISSLNY---VFLDFL--EEYQRLK 402 (416) Q Consensus 332 ~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~gl~p~~g--gd~~~~~~n~---~~~~~~--~~~~~~~ 402 (416) ...+++.+.+....+....++.+.+++++| +++..-+++++|+-+.+- .+...-.... ..++.. ...+... T Consensus 392 ~~~i~v~f~~~~~~s~~~~ada~~kl~~~g~~~~s~et~~~~l~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (488) T protein:vir:23 392 YYRMETVWRDPSTPTYAAKADAAAKLFANGAGLIPRERGWVDMGYTIVEREQMRQWLEQDQKQGLGLIGSLYGASTPEGK 471 (488) T ss_pred hccceEEecCCCCCCHHHHHHHHHHHHhcccccCCHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccCCCccc Confidence 123444445556778888999999998865 789999999998865421 1111000000 000000 0001111 Q ss_pred CCcccCCCCccCCC Q lcl|Aclame:pro 403 AGGAMKGGDNKNEG 416 (416) Q Consensus 403 ~~~~~~gge~~~~~ 416 (416) .+++..|++.++|. T Consensus 472 ~~~~~~~~~~~~e~ 485 (488) T protein:vir:23 472 PGEAPVGEPPAPEP 485 (488) T ss_pred CCCCCCCCCCCCCC Confidence 12233344444444 No 164 >protein:vir:105819 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1636 # MgeName: PMC # Cross-refs: genbank:acc:YP_655764;genbank:gi:109522087;genbank:GeneID:4157627 Probab=98.69 E-value=6.7e-08 Score=59.90 Aligned_cols=384 Identities=14% Similarity=0.048 Sum_probs=182.1 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--ccccc-----cHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGERV-----SESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) =+++++..+....... ...+..++-+.... .+... ....-..+.+...+|+..+..+-.-|+.+...++ T Consensus 8 ~~~~~l~~~~~~~~~r----~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~~~~~~~~~d 83 (456) T protein:vir:10 8 EWLPVLTKRIDDGMSR----VRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVGGSAD 83 (456) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHhcCCCchhcCcccChhhhhhhhhhhcchHHHHHHHHHhhhccCCeecCCCCC Confidence 0112222211111100 01122222222110 00111 0011134557788899999888888887543221 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcE----- Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGM----- 148 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~----- 148 (416) .. .+ ..++.++.+ | ....+...+..+++.+|.+|.++..++.|.+ .+..++|..+.+..++..+. T Consensus 84 ~~----~~-~~~~~i~~~-N---~~d~~~~~~~~~a~i~G~ay~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~~~~~ 153 (456) T protein:vir:10 84 SD----LA-LRARRIWRD-N---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWRIRAA 153 (456) T ss_pred cc----hH-HHHHHHHHh-c---ChhhHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEEccceeEEEEcCCCCcceEEE Confidence 11 11 112233333 2 2345667788999999999999999888876 46678888888877754421 Q ss_pred -EEEEEeeCCee-----------E-----------------Eechh------heeeeccC----CCCccccccHHHHHHH Q lcl|Aclame:pro 149 -LWYQTVLNGKA-----------I-----------------ELYDY------EVLHFKGL----STDGIHGKSPIGVVRE 189 (416) Q Consensus 149 -~~~~~~~~~~~-----------~-----------------~~~~~------~vih~~~~----~~~~~~G~s~~~~~~~ 189 (416) .+|.. .++.. . ..... ..-|.-.. ..+...|+|.++.... T Consensus 154 i~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~g~gd~e~vi~ 232 (456) T protein:vir:10 154 MRWWRD-LDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHID 232 (456) T ss_pred EEEEEe-cCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEEEecCCCCCchhhhhHH Confidence 11110 00000 0 00000 00010000 0123457888777766 Q ss_pred HHHHHHHHHHHHHHHHhccCCcceeeccCC---cCCHHHHHHH--HHHHHHhhcCCceeecCCCceeEeccCChhhHHHH Q lcl|Aclame:pro 190 HIGAQAAATKYNAKLYKNEATPRGILKVPA---FLDEKPKENV--RKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFV 264 (416) Q Consensus 190 ~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~---~~~~e~~~~~--~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~ 264 (416) .++.......-........+.|..++.-.. ...++.-..+ .+.|.. ..+.++.++++.++.++.... -..+. T Consensus 233 liDa~~~~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~q~~~~~-~~~~~ 309 (456) T protein:vir:10 233 IINRINRAELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEA--APGALWELPPGVDIWESQAND-FTPML 309 (456) T ss_pred HHHHHHHHHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhh--hccccccCCCCcceEEecccC-hhHHH Confidence 666555444433333444444444443211 0111111111 112221 224466778899887765322 23478 Q ss_pred HHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhh----c---Cchhcccccchhh Q lcl|Aclame:pro 265 ESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKL----F---LDHDQKSGHYVKF 337 (416) Q Consensus 265 e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l----~---~~~~~~~~~~~~f 337 (416) +..+.....|+..-++|+..+|... +|.| .+ +. .+....+.-.+...+..|...| - .-.+......++. T Consensus 310 ~~l~~~i~~~~~~s~~p~~~~~~~~-~N~S-g~-Ai-~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~g~~~~~~~~v 385 (456) T protein:vir:10 310 SAIKEHIRQLSSATKTPLPMLMPDS-ANQS-AE-GA-HNIEKGFLFKCEDRLSIAKIGLEAILVKALQIEGESVEDTVDV 385 (456) T ss_pred HHHHHHHHHHHhccCCChHHhcccc-cChH-HH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccceeE Confidence 8899999999999999999998533 2211 12 11 2222222222222222222211 0 0011111123444 Q ss_pred hhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 338 NIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 338 ~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) .+.+....+..+.++++.++.++|+++..-+++++|+.+.+- . -...+...+.+....++..+.++ .+| T Consensus 386 ~w~~~~~~~~~~~ada~~kl~~~gi~~~~~~~~~lg~~~~~i------~--~~e~er~~~e~~~~~~~~~~~~~--~~~ 454 (456) T protein:vir:10 386 SFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQI------K--QDDLDRAREQITLFAGNPVQRPQ--EDG 454 (456) T ss_pred EecCCCCcCHHHHHHHHHHHHHcCCChHHHHHhhCCCCHHHH------H--HHHHHHHHHHHHHHhhhhhhcCC--CCC Confidence 445667788899999999999999999999999898865310 0 00011111111111112122221 222 No 165 >protein:vir:102602 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1661 # MgeName: Llij # Cross-refs: genbank:acc:YP_654999;genbank:gi:109392189;genbank:GeneID:4157224 Probab=98.69 E-value=6.7e-08 Score=59.90 Aligned_cols=384 Identities=14% Similarity=0.048 Sum_probs=182.1 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--ccccc-----cHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGERV-----SESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) =+++++..+....... ...+..++-+.... .+... ....-..+.+...+|+..+..+-.-|+.+...++ T Consensus 8 ~~~~~l~~~~~~~~~r----~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~~~~~~~~~d 83 (456) T protein:vir:10 8 EWLPVLTKRIDDGMSR----VRLLARYSNGDAPLPELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVGGSAD 83 (456) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHhcCCCchhcCcccChhhhhhhhhhhcchHHHHHHHHHhhhccCCeecCCCCC Confidence 0112222211111100 01122222222110 00111 0011134557788899999888888887543221 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcE----- Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGM----- 148 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~----- 148 (416) .. .+ ..++.++.+ | ....+...+..+++.+|.+|.++..++.|.+ .+..++|..+.+..++..+. T Consensus 84 ~~----~~-~~~~~i~~~-N---~~d~~~~~~~~~a~i~G~ay~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~~~~~ 153 (456) T protein:vir:10 84 SD----LA-LRARRIWRD-N---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWRIRAA 153 (456) T ss_pred cc----hH-HHHHHHHHh-c---ChhhHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEEccceeEEEEcCCCCcceEEE Confidence 11 11 112233333 2 2345667788999999999999999888876 46678888888877754421 Q ss_pred -EEEEEeeCCee-----------E-----------------Eechh------heeeeccC----CCCccccccHHHHHHH Q lcl|Aclame:pro 149 -LWYQTVLNGKA-----------I-----------------ELYDY------EVLHFKGL----STDGIHGKSPIGVVRE 189 (416) Q Consensus 149 -~~~~~~~~~~~-----------~-----------------~~~~~------~vih~~~~----~~~~~~G~s~~~~~~~ 189 (416) .+|.. .++.. . ..... ..-|.-.. ..+...|+|.++.... T Consensus 154 i~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~g~gd~e~vi~ 232 (456) T protein:vir:10 154 MRWWRD-LDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHID 232 (456) T ss_pred EEEEEe-cCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEEEecCCCCCchhhhhHH Confidence 11110 00000 0 00000 00010000 0123457888777766 Q ss_pred HHHHHHHHHHHHHHHHhccCCcceeeccCC---cCCHHHHHHH--HHHHHHhhcCCceeecCCCceeEeccCChhhHHHH Q lcl|Aclame:pro 190 HIGAQAAATKYNAKLYKNEATPRGILKVPA---FLDEKPKENV--RKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFV 264 (416) Q Consensus 190 ~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~---~~~~e~~~~~--~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~ 264 (416) .++.......-........+.|..++.-.. ...++.-..+ .+.|.. ..+.++.++++.++.++.... -..+. T Consensus 233 liDa~~~~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~q~~~~~-~~~~~ 309 (456) T protein:vir:10 233 IINRINRAELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEA--APGALWELPPGVDIWESQAND-FTPML 309 (456) T ss_pred HHHHHHHHHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhh--hccccccCCCCcceEEecccC-hhHHH Confidence 666555444433333444444444443211 0111111111 112221 224466778899887765322 23478 Q ss_pred HHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhh----c---Cchhcccccchhh Q lcl|Aclame:pro 265 ESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKL----F---LDHDQKSGHYVKF 337 (416) Q Consensus 265 e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l----~---~~~~~~~~~~~~f 337 (416) +..+.....|+..-++|+..+|... +|.| .+ +. .+....+.-.+...+..|...| - .-.+......++. T Consensus 310 ~~l~~~i~~~~~~s~~p~~~~~~~~-~N~S-g~-Ai-~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~g~~~~~~~~v 385 (456) T protein:vir:10 310 SAIKEHIRQLSSATKTPLPMLMPDS-ANQS-AE-GA-HNIEKGFLFKCEDRLSIAKIGLEAILVKALQIEGESVEDTVDV 385 (456) T ss_pred HHHHHHHHHHHhccCCChHHhcccc-cChH-HH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccceeE Confidence 8899999999999999999998533 2211 12 11 2222222222222222222211 0 0011111123444 Q ss_pred hhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 338 NIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 338 ~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) .+.+....+..+.++++.++.++|+++..-+++++|+.+.+- . -...+...+.+....++..+.++ .+| T Consensus 386 ~w~~~~~~~~~~~ada~~kl~~~gi~~~~~~~~~lg~~~~~i------~--~~e~er~~~e~~~~~~~~~~~~~--~~~ 454 (456) T protein:vir:10 386 SFESPDRVTLGEKYSAASLAKAAGESWASIRRNILNYNADQI------K--QDDLDRAREQITLFAGNPVQRPQ--EDG 454 (456) T ss_pred EecCCCCcCHHHHHHHHHHHHHcCCChHHHHHhhCCCCHHHH------H--HHHHHHHHHHHHHHhhhhhhcCC--CCC Confidence 445667788899999999999999999999999898865310 0 00011111111111112122221 222 No 166 >protein:vir:95113 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240817;genbank:gi:66394677;genbank:GeneID:5133907 Probab=98.67 E-value=9.9e-08 Score=58.98 Aligned_cols=375 Identities=13% Similarity=0.027 Sum_probs=175.4 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcc--------cccccc---ccHHHHhccHHHHHHHHHHHHhhccCcceEE Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRK--------TASGER---VSESNSLVQPDIFACVNVLSDDIAKLPIHTY 69 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~---~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 69 (416) =++.++.++....... ...+..++.+.. ...... ..+..-+.++....+|+..+.-+-.-|+.+. T Consensus 30 ~~i~~~i~~~~~~~~~----~~~~~~Yy~g~~~i~~r~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~~~l~g~p~~~~ 105 (474) T protein:vir:95 30 EMIIRLIDDHRKQLDK----ITVGQRYYDKDNDIVKQMKKVDVYGNIDYDKPDWRITTNFHQNLVDQKVSYVASKPVTYS 105 (474) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHhcccCchhccccccccccccccccccceeccchHHHHHHHHHhhhccCCceec Confidence 0000110000000000 000111111100 000000 0001112345667788888888888887753 Q ss_pred eecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC--c Q lcl|Aclame:pro 70 KRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT--G 147 (416) Q Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~--~ 147 (416) . +++. .. ..+..++. | ........+....+.+|.||.++.++++|++ .+..++|..+-+..++.. . T Consensus 106 ~-~d~~----~~-~~l~~~~~--n---~~~~~~~e~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~d~~~~~~ 173 (474) T protein:vir:95 106 C-EDES----VL-KIIHDVLD--T---RWDNKLIDILTATSNKGIDWLQVYINENGEM-KLFRVPAEQAIPIWVDKEREE 173 (474) T ss_pred c-CchH----HH-HHHHHHHh--c---cHHHHHHHHHHHHhhcCcEEEEEEecCCCce-EEEEEcccceEEEEcCCCCCc Confidence 2 2211 11 12222322 2 2445667778899999999999999888876 477788888887776532 2 Q ss_pred EE--EEEEeeCC-eeE-Eechhheeeecc-----------------------C----C----CCccccccHHHHHHHHHH Q lcl|Aclame:pro 148 ML--WYQTVLNG-KAI-ELYDYEVLHFKG-----------------------L----S----TDGIHGKSPIGVVREHIG 192 (416) Q Consensus 148 ~~--~~~~~~~~-~~~-~~~~~~vih~~~-----------------------~----~----~~~~~G~s~~~~~~~~i~ 192 (416) .. .+.+...+ ... .+..+.+++.+. + + .+...|.|.++.+...++ T Consensus 174 ~~~~i~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~nn~~g~sd~e~v~~liD 253 (474) T protein:vir:95 174 LKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHIQSHFSNGNWGRVPFIAFKNNPEEVSDIWMYKSLID 253 (474) T ss_pred eEEEEEEEEEcCeeEEEEEeCCeEEEEEEcCCccccccccCcccccccccccCCCccceEeecCCCCCCCcHHHHHHHHH Confidence 11 11111111 111 112222222110 0 0 112457888888888888 Q ss_pred HHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHH Q lcl|Aclame:pro 193 AQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKA 272 (416) Q Consensus 193 ~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~ 272 (416) ....+.....+.++..+.|-.+++--...+.+ . +.......+++.++++.+...+........+.+..+...+ T Consensus 254 a~d~~~S~~~~~~~~~~~p~lv~~g~~~~~~~---~----~~~~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 326 (474) T protein:vir:95 254 AIDKRLSDAQNMFDESVELIYILKGYEGQDLE---E----FMRGLKYYKAINVDGDGGVETIQVEVPVSSTKEYIDLMRA 326 (474) T ss_pred HHHHHHHHHHHHHHHhcCceeeeecCCcccch---h----hhhhhhccceeeccCCCceeEEeecCCHHHHHHHHHHHHH Confidence 77766666666677777776666532211111 1 2222234556667777776666666666777788899999 Q ss_pred HHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhh Q lcl|Aclame:pro 273 QISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNID 340 (416) Q Consensus 273 ~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~ 340 (416) .|+..-++|..-.+ ...++-|.. .+.....+..+|..+++.|.+.+..+ .......+.| + T Consensus 327 ~i~~~s~~p~~~~~-~~~~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~g~~-----~d~~~i~v~f--~ 398 (474) T protein:vir:95 327 YIMEFGQGVDFQTD-KFGSAPSGIALKFLYGNLDLKANKLKNKATVAIQELIGFIIDFNNLK-----MDVKDIEISF--N 398 (474) T ss_pred HHHHHhCCcccccc-cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----cccceeeEEe--c Confidence 99999999853221 111222211 11222344445555555554443221 1112233444 4 Q ss_pred hhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCcccccccccccc---ccCCcc----cCCCC Q lcl|Aclame:pro 341 SELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQR---LKAGGA----MKGGD 411 (416) Q Consensus 341 ~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~---~~~~~~----~~gge 411 (416) .-...|..+.++. +.++|+++.-.+.+++++-+.+. .+.+- .+.....++ ...++. .+..+ T Consensus 399 ~~~p~d~~e~a~~---~~~~g~iS~et~i~~l~~v~d~~~E~~ri~-------~E~~~~~~~~~~~~~~~~d~~~~~~~~ 468 (474) T protein:vir:95 399 FNRMMNDAEQSQI---IAQSQYLSRETLVKSSPLVDDYKAELERIE-------QEQMEYNKQLPNLDDGGADGAQQQERS 468 (474) T ss_pred cCCCcCHHHHHHH---HHhcCCCchHHHHHhCCCCCCHHHHHHHHH-------HHHHHHHhcccccccccCCCCcCCCCC Confidence 4445566555554 55679999988888876533221 11000 000000000 000000 01111 Q ss_pred ccCCC Q lcl|Aclame:pro 412 NKNEG 416 (416) Q Consensus 412 ~~~~~ 416 (416) ++.++ T Consensus 469 ~~~~~ 473 (474) T protein:vir:95 469 NDKES 473 (474) T ss_pred ccCCC Confidence 11111 No 167 >protein:vir:99072 Length: 479 # NCBI annotation: gp27 # Family: family:all:524 # MgeID: mge:1671 # MgeName: Wildcat # Cross-refs: genbank:acc:YP_655892;genbank:gi:109521464;genbank:GeneID:4158037 Probab=98.67 E-value=4.4e-08 Score=60.93 Aligned_cols=386 Identities=8% Similarity=0.001 Sum_probs=171.6 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccccc---ccc-cHHHH----hccHHHHHHHHHHHHhhccCcceEEeec Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASG---ERV-SESNS----LVQPDIFACVNVLSDDIAKLPIHTYKRT 72 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~a----~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 72 (416) ++..+++++....... ...+..++-+...... ... ..... ..+.+...+|+.++..+--..|.+ . T Consensus 17 ~~~~~l~~~~~~~~~r----~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~iVd~~~~~l~~~gf~~---~ 89 (479) T protein:vir:99 17 YLETKVFPKMNTECER----LDDFEAWTKNGQEVPDLATRHKNKEREVLQQLSRKPWMGLMVNSFAQQLIVDGYRK---T 89 (479) T ss_pred HHHHHHHHHHHHHhHH----HHHHHHHHhcCCcccccccccCChhHHHHHHHhhcCcHHHHHHHHHhhcccccccC---C Confidence 2333333322111111 1112222222211100 000 01111 123456677887776554333322 2 Q ss_pred CCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEee-----cCCCcEEEEEeeccceEEEEEcCCCc Q lcl|Aclame:pro 73 DGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQF-----GSHGYPEALFPLRPDYTNAYVHPTTG 147 (416) Q Consensus 73 ~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r-----~~~g~~~~l~~l~p~~v~~~~~~~~~ 147 (416) ++. ....+.. ++.. | ........+..+++.+|.+|+++.. +..|.+ .+..++|..+.+.+++... T Consensus 90 d~~----~~~~~~~-i~~~-N---~~d~~~~~~~~~a~~~G~af~~v~~~~~~~d~~g~~-~i~~~~p~~~~~iydd~~~ 159 (479) T protein:vir:99 90 GTN----ENAKGWD-TWRL-N---QMDKQQFWLNRAVLTFGYAFIKVTSGISPLDGTTVA-RIKCIDPRDAFAIWEDPYW 159 (479) T ss_pred Cch----hhHHHHH-HHHh-c---ChhHHHHHHHHHHhhcCceEEEEecCCCCcCCCCce-EEEEechhheEEEecCCcc Confidence 111 1112223 3333 2 2235667788999999999998864 344544 4667788888776654322 Q ss_pred E--EEEEEee-------------------CCeeEE--------echhheeeeccCCCCccccccHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 148 M--LWYQTVL-------------------NGKAIE--------LYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAAT 198 (416) Q Consensus 148 ~--~~~~~~~-------------------~~~~~~--------~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~ 198 (416) . ..|.+.. ...... +..=.|+++.+.......|.|.++.+...++...... T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~g~sd~e~v~~liDa~~~~~ 239 (479) T protein:vir:99 160 DEWPKYLLERQPNGQYWWWTEEDYSIFEFKQGKFIYRETVSHDYGHIPFVRYVNVMDLRGVCYGDVEPLVTVAKAIDKTG 239 (479) T ss_pred cceeeEEEeecCceeEEEEecceEEEEEecCCceeeccccccCCCCcceEEeecCCCcCcCCcchhHHHHHHHHHHHHHH Confidence 1 1111110 111111 1112356666544333468888887777777666665 Q ss_pred HHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceee-cCCCceeEeccCChhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 199 KYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAI-IDYGLEYQSISMPLQEAQFVESMKFNKAQISMI 277 (416) Q Consensus 199 ~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~v-l~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~ 277 (416) .-....+.-.+.|..++.-.........+. ..+. . ..++++. -+++.++.++... .-..+.+..+.....|+.+ T Consensus 240 s~~~~~~~~~a~p~~~i~G~~~~~~~~~~~--~~~~-~-~~~~i~~~~~~~~~~~q~~~~-~~~~~~~~l~~~i~~i~~~ 314 (479) T protein:vir:99 240 LDILLVQHHQSFQIRWATGLMLPEGANADQ--EKMR-F-AQESMLISQNEKASFGAIPAA-PLDGLLNAYKESLLEFLAL 314 (479) T ss_pred HHHHHHHHHhhchhhhhcCCCcccccccch--hccc-c-ccccceeecCCCceEEEeccc-chHHHHHHHHHHHHHHhcc Confidence 555555565666665554321111111100 0011 1 1233333 4566777665422 1234667778888889988 Q ss_pred hccchhhcccccCCCcccHHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhh Q lcl|Aclame:pro 278 YKVPLHKLNELDKATFSNIEHQ-------------SIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELR 344 (416) Q Consensus 278 ~gvp~~~lg~~~~~~~s~~e~~-------------~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~ 344 (416) -++|+..+|...++ +.+.. ....+..+|.-+++.+....+ .........+.+.+.+... T Consensus 315 t~~p~~~~g~~~n~---Sg~Al~~~~~~l~~ka~~~~~~f~~al~~~~~l~~~~~~-----~~~~~~~~~i~~~w~~~~~ 386 (479) T protein:vir:99 315 AQLPPHIAGQIVNV---AADALAAGTRQTMQKLFEKQATWKASHNQTMRLVNKIEG-----RTEEATDLDFTITWQDVTI 386 (479) T ss_pred CCCCHHHcccccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCccccceeeeEEecCCCC Confidence 99999998854321 11111 112222223333332222111 0101111234444445566 Q ss_pred ccHHHHHHHHHHHHhCCCcCHHHHHHHh-CCCCCC--CCCeEe--e-ccC--ccccc---cccccccccCCcccCCCCcc Q lcl|Aclame:pro 345 GDSKTQAEYLKTLHETGVLNKDEIRELL-ERNPIE--NGDKYI--S-SLN--YVFLD---FLEEYQRLKAGGAMKGGDNK 413 (416) Q Consensus 345 ~d~~~~~~~~~~~~~~g~~t~NE~R~~~-gl~p~~--ggd~~~--~-~~n--~~~~~---~~~~~~~~~~~~~~~gge~~ 413 (416) .+..+.++++.+++++|+++.-.+.+++ |+++.. -..+.. . ..+ ...+. ..........+.......+. T Consensus 387 ~s~~~~ad~~~kl~~ag~is~et~l~~l~gv~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (479) T protein:vir:99 387 QSLAQFADAWAKMVESLKIPAEGVWDMIPNLDQSTVNGWKEIYDREGDFGKYMRKLQNGPDPAEQRGGPNGATNMQQANN 466 (479) T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCcccccCCCCCCCCCCCCCC Confidence 7889999999999999999998888877 776421 000000 0 000 00000 00000000000000001111 Q ss_pred CCC Q lcl|Aclame:pro 414 NEG 416 (416) Q Consensus 414 ~~~ 416 (416) ..| T Consensus 467 ~~~ 469 (479) T protein:vir:99 467 KTG 469 (479) T ss_pred CCc Confidence 111 No 168 >protein:vir:94742 Length: 409 # NCBI annotation: putative portal protein # Family: family:all:524 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996701;genbank:gi:45597416;genbank:GeneID:2767966 Probab=98.64 E-value=1.5e-07 Score=57.94 Aligned_cols=343 Identities=14% Similarity=0.110 Sum_probs=164.2 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccc--cccccHH---H-HhccHHHHHHHHHHHHhhccCcceEEeecCC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTAS--GERVSES---N-SLVQPDIFACVNVLSDDIAKLPIHTYKRTDG 74 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~-a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 74 (416) +.+.++.......... ...+..++.+..... +..+-++ . -+...+..-+|+.++..+.=-.|. .. + T Consensus 4 ~~i~~L~~~~~~~~~r----~~~~~~yY~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~iVds~a~rl~~~Gf~---~~-d 75 (409) T protein:vir:94 4 KGIGYLRFKLSVHKRR----AEMRYDQYAMKYVDRFKGITIPQALSQQYRSILGWCAKGVDSLADRLVFREFE---ND-D 75 (409) T ss_pred HHHHHHHHHHHHHhHH----HHHHHHHhcccCchhhcChhhhHHHHHHHhhhcchhHHHHHHhHhhcccCccc---CC-c Confidence 5555555432221111 112222332221110 1111110 0 112345566677666543322221 11 1 Q ss_pred cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEE--EE Q lcl|Aclame:pro 75 GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLW--YQ 152 (416) Q Consensus 75 ~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~--~~ 152 (416) ..+ +.++.+ | +.......+..+.+.+|++|+++..++.|.| .+.++.|..+.+..++..+... +. T Consensus 76 -------~~l-~~i~~~-N---~ld~~~~~~~~~aliyG~sf~~v~~~~dg~~-~i~~~sp~~~~~i~D~~~~~~~~a~~ 142 (409) T protein:vir:94 76 -------FTV-NEIFEE-N---NPDIFFDSAVLSSLIASCSFTYISKGENDAV-RLQVIEAVNATGIIDPITGLLTEGYA 142 (409) T ss_pred -------hHH-HHHHHh-c---ChhHHHHHHHHHHHHhcceeEEEecCCCCce-EEEEeccceEEEEEecCCCceeeeEE Confidence 112 233332 2 2235666788899999999999999888876 6778899888888876543321 11 Q ss_pred Eee---CCee---EEechh----------------------heeeeccCC-CCccccccHH----HHHHHHHHHHHHHHH Q lcl|Aclame:pro 153 TVL---NGKA---IELYDY----------------------EVLHFKGLS-TDGIHGKSPI----GVVREHIGAQAAATK 199 (416) Q Consensus 153 ~~~---~~~~---~~~~~~----------------------~vih~~~~~-~~~~~G~s~~----~~~~~~i~~~~~~~~ 199 (416) +.. .+.. ..+.++ .|++|.+.. ....+|.|.+ ..+.+.+.....-.. T Consensus 143 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~vPvV~f~n~~~~~~~~G~s~I~e~v~~l~da~~r~~~~~~ 222 (409) T protein:vir:94 143 VLERDENNNVVLEAHFLPDRTDYYYRDSRNNISIANPTGHPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAKRTLERAD 222 (409) T ss_pred EEEecCCCceEEEEEEecCcEEEEEecCceeEeeeCCCCCcceEEeccccccccccCccccchhHHHHHHHHHHHHHHHH Confidence 111 0100 011111 244444332 2345777744 344444444443333 Q ss_pred HHHHHHhccCCcceeec-cCCcCCHHHHHHHHHHHHHhhcCCceeecC-----CCceeEeccCChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 200 YNAKLYKNEATPRGILK-VPAFLDEKPKENVRKEWKRVNKVENIAIID-----YGLEYQSISMPLQEAQFVESMKFNKAQ 273 (416) Q Consensus 200 ~~~~~~~n~~~~~~v~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~-----~g~~~~~~~~~~~d~~~~e~~~~~~~~ 273 (416) ....++. .|..++. .+... +..+.++... ++++.++ ++.++.++....- ..+.+..+..... T Consensus 223 ~~~e~~a---~pqr~i~G~d~d~--~~~~~~~~~~------~~i~~~~~d~dg~~~~v~q~~~~~l-~~~~~~l~~~~~~ 290 (409) T protein:vir:94 223 VTAEFYS---FPQKYVTGLSDDA--EPMETWKATV------SSMLQFTKDEDGDKPTLGQFTQPSM-SPFTEQLRTAAAG 290 (409) T ss_pred HHHHHhc---ChhheeEecCCCC--cccchhhhhH------HHhhcCCCCCCCCCceEEecCCCCh-hHHHHHHHHHHHH Confidence 3333433 3444333 22211 1222232222 2234443 2355555533221 2578999999999 Q ss_pred HHHHhccchhhcccccCCCcccHHHH---HHHHHHHHHHHHHHHHHHHHHHhh---c-Cchh----cccccchhhhhhhh Q lcl|Aclame:pro 274 ISMIYKVPLHKLNELDKATFSNIEHQ---SIEYVRNTLQPWIVNFEQELNVKL---F-LDHD----QKSGHYVKFNIDSE 342 (416) Q Consensus 274 Ia~~~gvp~~~lg~~~~~~~s~~e~~---~~~f~~~~l~P~~~~i~~~l~~~l---~-~~~~----~~~~~~~~f~~~~l 342 (416) +|..-++|++.+|.... |-++.+.. ...+. ...+-..+.+.+.+.+.+ + .... ......+++....+ T Consensus 291 ~a~~t~lP~~~lg~~~~-NpsSa~Al~a~~~~L~-~~a~~k~~~fg~~~~~~~rla~~i~~~~~~~~~~~~~~~v~W~p~ 368 (409) T protein:vir:94 291 FAGETGLTLDDLGFVSD-NPSSVEAIKASHENLR-LAGRKAQRSLGAGLLNVAYLAACLRDDAPYLREQFRKTKPKWEPL 368 (409) T ss_pred HhhhcCCCHHHhccccC-chhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccccceEEeccC Confidence 99999999999996543 22222221 11111 112222222333333211 0 0000 01111233233333 Q ss_pred hhcc---HHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 343 LRGD---SKTQAEYLKTLHETG--VLNKDEIRELLERNPIE 378 (416) Q Consensus 343 ~~~d---~~~~~~~~~~~~~~g--~~t~NE~R~~~gl~p~~ 378 (416) ...+ ....++++.|++++| ++..+-+++++|+..-+ T Consensus 369 ~~~~~~~~a~~aDa~~Kl~~ag~~~~~~~~~~~~lG~~~~d 409 (409) T protein:vir:94 369 FEADASMLSLIGDGAIKLNQAIPEFINKDTIRDLTGIEGGE 409 (409) T ss_pred CCcchHHHHHHHHHHHHHHHhcccccchhHHHHHcCCCCCC Confidence 3333 466778899999998 67789999999998876 No 169 >protein:vir:1236 Length: 483 # NCBI annotation: similar to phage Spp1 gp6 (portal protein) # Family: family:all:125 # MgeID: mge:25 # MgeName: phi ETA # Cross-refs: genbank:acc:NP_510935;genbank:gi:17426269;genbank:GeneID:927380 Probab=98.61 E-value=1.9e-07 Score=57.40 Aligned_cols=382 Identities=11% Similarity=0.039 Sum_probs=181.7 Q ss_pred Ccchhhhcccc-ccccccccchhHHHhhhcCcccc---------cc--ccccHHHHhccHHHHHHHHHHHHhhccCcceE Q lcl|Aclame:pro 1 MLLERMFEKRS-GSSDHEDGFNNILLNMFGGRKTA---------SG--ERVSESNSLVQPDIFACVNVLSDDIAKLPIHT 68 (416) Q Consensus 1 m~~~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------~~--~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~ 68 (416) +....+.++.- .-..... -...+..++-+.... .+ .......-+..+....+|+..+..+-.-|+.+ T Consensus 34 e~~~~~i~~~i~~~~~~~~-r~~~l~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~~l~G~p~~~ 112 (483) T protein:vir:12 34 ETLEEMIVRYIKQHLEKLP-EISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKPIAF 112 (483) T ss_pred hhHHHHHHHHHHHHHHHHH-HHHHHHHHhccccccccccccccccccccccccccccccchHHHHHHHHhhhhcccCcee Confidence 11111111000 0000000 011122222221100 00 00001111235677788888888888888775 Q ss_pred EeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC--C Q lcl|Aclame:pro 69 YKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT--T 146 (416) Q Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~--~ 146 (416) ...+ +.. . ..+..++. | ........+..+.+.+|.+|.++..+.+|.+ .+..++|..+.+..++. + T Consensus 113 ~~~d-~~~----~-~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~y~~v~~d~d~~~-~i~~~~p~~~~~v~d~~~~~ 180 (483) T protein:vir:12 113 KHTD-DEV----V-KRIDEVLG--N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTDKEHE 180 (483) T ss_pred ccCC-hHH----H-HHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEEEEcCCCce-EEEEEcccceEEEEcCCCCC Confidence 3222 111 0 11222322 2 2345556677889999999999999988876 57778998888877643 2 Q ss_pred cEE----EEEEeeCCeeEEechhheeeecc----------------------CC---------CCccccccHHHHHHHHH Q lcl|Aclame:pro 147 GML----WYQTVLNGKAIELYDYEVLHFKG----------------------LS---------TDGIHGKSPIGVVREHI 191 (416) Q Consensus 147 ~~~----~~~~~~~~~~~~~~~~~vih~~~----------------------~~---------~~~~~G~s~~~~~~~~i 191 (416) ... +|..........+.+..+.++.. +. .+...|.|.++.+...+ T Consensus 181 ~~~~~ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~li 260 (483) T protein:vir:12 181 ELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYKTLI 260 (483) T ss_pred ceEEEEEEEEeecceEEEEEecCeEEEEEEeCCeeeecccccccccccccccCCCCccceEEecCCCCCCCchhhHHHHH Confidence 221 11111111111111222222110 00 01235788888888888 Q ss_pred HHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHH Q lcl|Aclame:pro 192 GAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNK 271 (416) Q Consensus 192 ~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~ 271 (416) +....+.....+.+...+.|-.+++.-... ..+...+.. ...+++.++++.+...+.....+..+.+..+... T Consensus 261 Da~d~~~S~~~~~~~~~~~~~lv~~g~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 333 (483) T protein:vir:12 261 DAYNRRLSDLSNTFKDSNELTYVLTNYDDQ---ELPEFKRLL----RYYGAIKVSDNGGVDTIQVEVPVENSKKYLDELY 333 (483) T ss_pred HHHHHHHHHHHHHHHHhcCceeeeecCCcc---cchhHHHhh----hhccccccCCCCcceEEeecCCHHHHHHHHHHHH Confidence 777766666666677777776666532211 111222211 2233555555555555555556667778888888 Q ss_pred HHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhh Q lcl|Aclame:pro 272 AQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNI 339 (416) Q Consensus 272 ~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~ 339 (416) +.|+..-++|..-.+.. +++-|.. .......+...+..+++.|...++.+ . ....+.+.+ T Consensus 334 ~~I~~~s~~p~~~~~~~-~~n~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~li~~~~~~~-----~--~~~~i~v~f 405 (483) T protein:vir:12 334 QKIMLFGQAVDFSSDKF-GSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIK-----G--EHKDVDISF 405 (483) T ss_pred HHHHHHhCCCCCCcccc-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----C--ccceeeEEe Confidence 99999999986443321 1222111 11223334444555555554443321 1 123345555 Q ss_pred hhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCccccccccccccccCCcccCCCCc----c Q lcl|Aclame:pro 340 DSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDN----K 413 (416) Q Consensus 340 ~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~----~ 413 (416) ..-+..|..+.++.+.++ .|+++.--+.++++.-+.+. .+++---. .+.....+....+.....+++ + T Consensus 406 ~~~~p~~~~~~a~~~~kl--~GiiS~et~~~~~~~v~d~~~E~~ri~~E~----~~~~~~~~~~~~~~~d~~~~~~~~~~ 479 (483) T protein:vir:12 406 NYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQ----MEYNKQLPNLDDGGADGAQQQERSNN 479 (483) T ss_pred CCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHH----HHHHhhcccccccccCCcccCCCCCc Confidence 677788999999999988 58999988888886533211 11000000 000000000000011001111 1 Q ss_pred CCC Q lcl|Aclame:pro 414 NEG 416 (416) Q Consensus 414 ~~~ 416 (416) .++ T Consensus 480 ~e~ 482 (483) T protein:vir:12 480 KES 482 (483) T ss_pred ccC Confidence 111 No 170 >protein:vir:99916 Length: 504 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1611 # MgeName: Halo # Cross-refs: genbank:acc:YP_655520;genbank:gi:109392290;genbank:GeneID:4157085 Probab=98.60 E-value=2e-07 Score=57.26 Aligned_cols=397 Identities=13% Similarity=0.045 Sum_probs=166.7 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--cccccc---HHHHhccHHHHHHHHHHHHhhccCcceEEeecCCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGERVS---ESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG 75 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 75 (416) -.+.++.......... ...+..+.-+.... .+..+. .+......+..-+|+.++..+.--.|.+ .++. T Consensus 24 ~~i~~L~~~~~~~~~r----~~~l~~YY~G~~~i~~~~~~~p~~~~~~~~v~n~~~~iVd~~a~rl~~~Gf~~---~d~~ 96 (504) T protein:vir:99 24 DKVNGLYQQLVDRTPR----NLLRASFYDGKYAIRQIGNLIPPEYLRTATVLGWSAKAVDTLARRCNLESFVW---PDGD 96 (504) T ss_pred HHHHHHHHHHHHHhHH----HHHHHHHHhccccchhccccccHHHHHHhhccCcHHHHHHHHHhhhccceeeC---CCCC Confidence 2223333222111110 11122222221111 011111 1111233445567777776543333321 1111 Q ss_pred ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEE-EEEeeccceEEEEEcCCCcEEE---- Q lcl|Aclame:pro 76 IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPE-ALFPLRPDYTNAYVHPTTGMLW---- 150 (416) Q Consensus 76 ~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~-~l~~l~p~~v~~~~~~~~~~~~---- 150 (416) . . ...++.++...+ .......+..+.+.+|+||+++..+..|.+. .+.+++|..+.+.+++..+... T Consensus 97 ~---~-~~~l~~i~~~N~----ld~~~~~~~~~a~iyG~af~~v~~~~d~~~~~~I~~~sP~~~~~iyD~~~~~~~~a~~ 168 (504) T protein:vir:99 97 Y---G-SIGGPDVWDENF----FATKANNAMVSSLIHGPAFLINTEGGAGEPDSLIHVKSAMQATGEWNSRRNAMDSLLS 168 (504) T ss_pred h---h-hHHHHHHHHhcC----hhhHHHHHHHHHHhhCceeEEEecCCCCCceeEEEEeccceeEEEEeCCCCceeEEEE Confidence 0 1 111233333322 2356778889999999999999988888764 5678899988887775433211 Q ss_pred -EEEeeCCeeE---Eechh------------------------heeeeccCCC-CccccccHH----HHHHHHHHHHHHH Q lcl|Aclame:pro 151 -YQTVLNGKAI---ELYDY------------------------EVLHFKGLST-DGIHGKSPI----GVVREHIGAQAAA 197 (416) Q Consensus 151 -~~~~~~~~~~---~~~~~------------------------~vih~~~~~~-~~~~G~s~~----~~~~~~i~~~~~~ 197 (416) +.....+... .+.++ .|+++.+... ...+|.|.+ ..+.+.+.....- T Consensus 169 ~~~~d~~g~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~gvPvV~~~n~~~~~~~~G~sei~~~v~~l~Da~~~~~~~ 248 (504) T protein:vir:99 169 ITSRDAEGHPTGIALYEDGVTVTADMDDDGDWHADVRTHKLGVPVEVLPYKPREDRPLGSSRITRPVMSLQQRALKGCIR 248 (504) T ss_pred EEEecCCCeEEEEEEEcCCcEEEEEEcCCceeeeccccCCCCcceEEecccccCccccCcccchhhHHHHHHHHHHHHHH Confidence 1111111110 11111 2445543322 345676643 2333333333322 Q ss_pred HHHHHHHHhccCCcceeec-cC-CcCCH---HHHHHHHHHHHHhh---cCCceeec-CCCceeEeccCChhhHHHHHHHH Q lcl|Aclame:pro 198 TKYNAKLYKNEATPRGILK-VP-AFLDE---KPKENVRKEWKRVN---KVENIAII-DYGLEYQSISMPLQEAQFVESMK 268 (416) Q Consensus 198 ~~~~~~~~~n~~~~~~v~~-~~-~~~~~---e~~~~~~~~~~~~~---~~~~~~vl-~~g~~~~~~~~~~~d~~~~e~~~ 268 (416) ......++ +.|..++. .+ ..... .....++....+.. ......+. ..+.++.++....- ..+.+..+ T Consensus 249 ~~~~~e~~---a~p~r~i~G~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~q~~~~~l-~~~~~~l~ 324 (504) T protein:vir:99 249 MDGHADVY---SFPQLILLGADAKNFRNKDGSMKPAWQIALARVFALPDDEDEPDAARARADVKQFPASSP-QPHIEMLE 324 (504) T ss_pred HHHHHHHh---cchhhhhccCCccccccccccccchhhhhhhhhhcCCCccccccccCccceeeecCCCCh-HHHHHHHH Confidence 22222222 23333332 11 11111 11122222222221 11111111 12355555443221 24788899 Q ss_pred HHHHHHHHHhccchhhcccccCCCcccHHHHH--HHHHHHHHHHHHHHHHHHHHHhhc----Cchh----cccccchhhh Q lcl|Aclame:pro 269 FNKAQISMIYKVPLHKLNELDKATFSNIEHQS--IEYVRNTLQPWIVNFEQELNVKLF----LDHD----QKSGHYVKFN 338 (416) Q Consensus 269 ~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~--~~f~~~~l~P~~~~i~~~l~~~l~----~~~~----~~~~~~~~f~ 338 (416) .....|+..-++|+..+|.....+.++.+... ..=+...+.-..+.+.+.|.+.+. .... ......+++. T Consensus 325 ~~i~~~a~~t~~P~~~lG~~~~~n~sSa~Ai~~~~~~L~~ka~~k~~~f~~~l~~~~rla~~~~~~~~~~~~~~~~~~v~ 404 (504) T protein:vir:99 325 QIAMMFSGETSIPVESLGFSNRANPTSADAYIASREDLIAEAEGATDDWSPAFRRSMIRALAIKNGLDRIPPEWKTIDSK 404 (504) T ss_pred HHHHHHHhhhCCCHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccceeE Confidence 99999999999999999876544434333321 111111122333444444433211 0000 1112334444 Q ss_pred hhhhhhccHHHHHHHHHHHHhCCCcC---HHHHHHHhCCCCCC--C---------C----CeEeeccCcccccccccccc Q lcl|Aclame:pro 339 IDSELRGDSKTQAEYLKTLHETGVLN---KDEIRELLERNPIE--N---------G----DKYISSLNYVFLDFLEEYQR 400 (416) Q Consensus 339 ~~~l~~~d~~~~~~~~~~~~~~g~~t---~NE~R~~~gl~p~~--g---------g----d~~~~~~n~~~~~~~~~~~~ 400 (416) ..+....+..+.++++.+++++|.+. ..-+.+++|+.+.+ - + |.+.-..+....+..+..+. T Consensus 405 w~d~~~~s~a~~aDa~~Kl~~ag~~l~~~~~~l~~~lg~~~~ei~r~~~e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 484 (504) T protein:vir:99 405 FRSPLYLSKAAQADAGAKMLGAGPEWLKETEVGLELLGLTPQQAKRALAERRRASSVSIIEALNRRQQEAATAGEDQDQG 484 (504) T ss_pred ecCCCccCHHHHHHHHHHHHhhccccccchHHHHhhcCCCHHHHHHHHHHHHHHhhHHHHHHHhcccCCCCCCCCCCCcC Confidence 55677888999999999999988633 24455677887532 0 0 00111000000000000000 Q ss_pred ccC----CcccCCCCccCCC Q lcl|Aclame:pro 401 LKA----GGAMKGGDNKNEG 416 (416) Q Consensus 401 ~~~----~~~~~gge~~~~~ 416 (416) ..+ .....++..+-+| T Consensus 485 ~~e~a~~~~~~~~~~p~~~~ 504 (504) T protein:vir:99 485 AGEPPANEPPAALGRPTLVG 504 (504) T ss_pred CCCCCCCCCCccCCCcccCC Confidence 000 0000011111122 No 171 >protein:vir:1634 Length: 409 # NCBI annotation: Structural protein # Family: family:all:524 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695055;genbank:gi:23455746;genbank:GeneID:955506 Probab=98.60 E-value=2.2e-07 Score=57.12 Aligned_cols=343 Identities=13% Similarity=0.108 Sum_probs=163.9 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccc--cccccHH----HHhccHHHHHHHHHHHHhhccCcceEEeecCC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTAS--GERVSES----NSLVQPDIFACVNVLSDDIAKLPIHTYKRTDG 74 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 74 (416) +.+.++.+.-...... ...+..++-+..... +..+-++ .-+...+..-+|+.++..+.=-.|. .. + T Consensus 4 ~~i~~L~~~~~~~~~r----~~~~~~yY~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~iVds~a~rl~~~Gf~---~~-d 75 (409) T protein:vir:16 4 KGIGYLRFKLSVHKRR----AEMRYEQYAMKHVDRFKGITIPQALSQQYRSILGWCAKGVDSLADRLVFREFE---ND-D 75 (409) T ss_pred HHHHHHHHHHHHHhHH----HHHHHHHHhccCchhhcchhhhHHHHHHHhhhcChhHHHHHHhHhhccccccc---Cc-c Confidence 5555555432221111 112222222221110 1111110 0112345556666666544333332 11 1 Q ss_pred cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEE--EE Q lcl|Aclame:pro 75 GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLW--YQ 152 (416) Q Consensus 75 ~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~--~~ 152 (416) ..+ +.++.+ | +.......+..+.+.+|++|+.+..++.|.| .+.++.|.++....++..+... +. T Consensus 76 -------~~l-~~i~~~-N---~ld~~~~~~~~~al~yG~sf~~v~~~~dg~~-~i~~~sP~~~~~i~D~~~~~~~~a~~ 142 (409) T protein:vir:16 76 -------FTV-NEIFEE-N---NPDIFFDSTVLSALIASCSFTYISKGENDAV-RLQVIEATNATGIIDPITGLLTEGYA 142 (409) T ss_pred -------hHH-HHHHHh-c---ChhHHHHHHHHHHHHhCceeEEEecCCCCce-EEEEEcccceEEEeecccccceeeeE Confidence 112 223332 2 2335666888899999999999998888876 6778888888877765433211 11 Q ss_pred Ee---eCCee---EEechh----------------------heeeeccCC-CCccccccH----HHHHHHHHHHHHHHHH Q lcl|Aclame:pro 153 TV---LNGKA---IELYDY----------------------EVLHFKGLS-TDGIHGKSP----IGVVREHIGAQAAATK 199 (416) Q Consensus 153 ~~---~~~~~---~~~~~~----------------------~vih~~~~~-~~~~~G~s~----~~~~~~~i~~~~~~~~ 199 (416) +. ..+.. ..+.++ .|++|.+.. ....+|.|- +..+.+.+.....-.. T Consensus 143 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~~~~~~G~seI~~~v~~l~da~~r~~~~~~ 222 (409) T protein:vir:16 143 VLERDENNNVVLEAHFLPDRTDYYYRDSRNNISIANPTGNPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAKRTLERAD 222 (409) T ss_pred EEEecCCCceEEEEEEecCcEEEEEecCccccceecCCCCcceEEecccccccccCCccccchhHHHHHHHHHHHHHHHH Confidence 10 01110 001111 244554332 234567764 4444555554444444 Q ss_pred HHHHHHhccCCcceeec-cCCcCCHHHHHHHHHHHHHhhcCCceeecC-----CCceeEeccCChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 200 YNAKLYKNEATPRGILK-VPAFLDEKPKENVRKEWKRVNKVENIAIID-----YGLEYQSISMPLQEAQFVESMKFNKAQ 273 (416) Q Consensus 200 ~~~~~~~n~~~~~~v~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~-----~g~~~~~~~~~~~d~~~~e~~~~~~~~ 273 (416) ....++. .|..++. .+.... ..+.++.. .++++.++ ++.++.++....- ..+.+..+..... T Consensus 223 ~~~e~~a---~pqr~i~G~d~d~~--~~~~~~~~------~~~i~~~~~d~~g~~~~v~q~~~~~l-~~~~~~l~~~~~~ 290 (409) T protein:vir:16 223 VTAEFYS---FPQKYVTGLSDDAE--PMETWKAT------VSSMLQFTKDEDGDKPTLGQFTQPSM-SPFTEQLRTAAAG 290 (409) T ss_pred HHHHHhc---ChhheeEecCCCCC--ccchhhhh------hhHhhccCCCCCCCCceEEecCCCCh-hHHHHHHHHHHHH Confidence 4444443 3433332 322111 11222211 12344443 2345655543221 2588999999999 Q ss_pred HHHHhccchhhcccccCCCcccHHH---HHHHHHHHHHHHHHHHHHHHHHHh----hcCchhc----ccccchhhhhhhh Q lcl|Aclame:pro 274 ISMIYKVPLHKLNELDKATFSNIEH---QSIEYVRNTLQPWIVNFEQELNVK----LFLDHDQ----KSGHYVKFNIDSE 342 (416) Q Consensus 274 Ia~~~gvp~~~lg~~~~~~~s~~e~---~~~~f~~~~l~P~~~~i~~~l~~~----l~~~~~~----~~~~~~~f~~~~l 342 (416) +|..-++|++.+|.... |-++.+. +...+.. ..+-..+.+.+.+.+. +...... .....+++...+. T Consensus 291 ~a~~s~lP~~~lg~~~~-NpsSa~Ai~a~~~~L~~-ka~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~~v~W~~~ 368 (409) T protein:vir:16 291 FAGETGLTLDDLGFVSD-NPSSVEAIKASHENLRL-AGRKAQRSLGAGLLNVAYLAACLRDDVPYLREQFSKTKPKWEPL 368 (409) T ss_pred HhhhcCCCHHHcccccC-chhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhhccceEEecCC Confidence 99999999999996542 2122222 1111111 1222233333333321 1111110 1111222223333 Q ss_pred h---hccHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCC Q lcl|Aclame:pro 343 L---RGDSKTQAEYLKTLHETG--VLNKDEIRELLERNPIE 378 (416) Q Consensus 343 ~---~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~gl~p~~ 378 (416) . ..+....++++.|++++| ++..+-+++++|+..-+ T Consensus 369 ~~~~~~s~a~~aDa~~Kl~~a~~~~~~~~v~~~~~g~~~~d 409 (409) T protein:vir:16 369 FEADASMLSLIGDGAIKLNQAIPEFINKDTIRDLTGIKGAE 409 (409) T ss_pred CCcchhhHHHHHHHHHHHHhhcccccchhHHHHhccCCCCC Confidence 2 344678889999999986 34467789999998776 No 172 >protein:vir:3964 Length: 453 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663672;genbank:gi:21716109;genbank:GeneID:951201 Probab=98.59 E-value=1.3e-07 Score=58.30 Aligned_cols=385 Identities=12% Similarity=0.031 Sum_probs=180.3 Q ss_pred Cc-----------chhhhccccccccccccchhHHHhhhcCc-------cccccccccHHHHhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 ML-----------LERMFEKRSGSSDHEDGFNNILLNMFGGR-------KTASGERVSESNSLVQPDIFACVNVLSDDIA 62 (416) Q Consensus 1 m~-----------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia 62 (416) |. +.++.++........ ..+..++-+. ...... ...=+..+.....|+..+..+- T Consensus 9 ~~~p~d~~~~~~~l~~~i~~~~~~~~r~----~~~~~yy~g~~~i~~~~~~~~~~---~~~ki~~n~~~~ivd~~~~~l~ 81 (453) T protein:vir:39 9 MTFPKDEPITNEVVTKFMEKHRLEVARY----EYLKNMYRGIMAIDAEPTKDLWK---PDNRLTVNFTKYIVDTFTGYFN 81 (453) T ss_pred eEcCCCCCCCHHHHHHHHHHHHHHHHHH----HHHHHHhhccCchhcCCCccccC---ccceeecchHHHHHHHHhhhhc Confidence 11 111111111000000 0011111111 000010 0011234667778888888887 Q ss_pred cCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEE Q lcl|Aclame:pro 63 KLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYV 142 (416) Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~ 142 (416) .-|+.+...+++ ....+.. ++.. | ........+..+.+.+|.||.++..++.|.+ .+..++|..+.+.. T Consensus 82 g~~~~~~~~d~~-----~~~~l~~-i~~~-N---~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~i~~~~p~~~~~v~ 150 (453) T protein:vir:39 82 GIPVKKSHSDKE-----TLSKLQE-FDNL-N---DMEDEESELAKMACIYGRAFELLYQNEETQT-NVIYNTPENMFMVY 150 (453) T ss_pred ccCceeccCChH-----HHHHHHH-HHHh-c---ChhHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEe Confidence 777765432211 1111222 2222 2 3446778888999999999999999988876 46667888888877 Q ss_pred cCCCc--EE-EEEEeeCCee---E-EechhheeeeccCC---------------------CCccccccHHHHHHHHHHHH Q lcl|Aclame:pro 143 HPTTG--ML-WYQTVLNGKA---I-ELYDYEVLHFKGLS---------------------TDGIHGKSPIGVVREHIGAQ 194 (416) Q Consensus 143 ~~~~~--~~-~~~~~~~~~~---~-~~~~~~vih~~~~~---------------------~~~~~G~s~~~~~~~~i~~~ 194 (416) ++... .. ..++...... + .+.++.++++.... .+...|.|.++.+...++.. T Consensus 151 d~~~~~~~~~~ir~~~~~~~~~~~~~yt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa~ 230 (453) T protein:vir:39 151 DDTIKQEPLFAVRYGYDDDYKLYGEVYTKETTYALNGTMGFYNMTEQAPNPFDDLPVVEFYFNEERMSIFESVISLVNAF 230 (453) T ss_pred cCCCCCeEEEEEEEEEeCCeEEEEEEEeCCeEEEEEecCCceeeecccccCCCceeEEEecCCCCCCcchhhhHHHHHHH Confidence 65332 11 1111111110 0 11122222221100 11235788888777777666 Q ss_pred HHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHH Q lcl|Aclame:pro 195 AAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQI 274 (416) Q Consensus 195 ~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~I 274 (416) ........+.+...+.|..+++-. ..+++..+.++.. ......+....+++.++..+........+.+..+...+.| T Consensus 231 ~~~~s~~~~~~~~~~~p~~~~~g~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~l~~~I 307 (453) T protein:vir:39 231 NKAISEKANDVDYFSDQYLTFLGA-AVEEEDLKNIRSN--RVINYYGESSEAKNVDVKFLEKPDSDSQTENLLDRLTKLI 307 (453) T ss_pred HHHHHHHHHHHHHhhCceeeeecC-CCCchhhhhhhhc--ceeeecCCCCCCCCCceeEEeecCCHHHHHHHHHHHHHHH Confidence 666666666666777776666532 3344444433221 1111111111223444444444455566677788888899 Q ss_pred HHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhh Q lcl|Aclame:pro 275 SMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSE 342 (416) Q Consensus 275 a~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l 342 (416) +..-++|..-.+.. |+.|.. .......+..+|..+++.+...++..- .. .....+.+.+..- T Consensus 308 ~~~s~~p~~~~~~~--gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~-~~---~~~~~i~v~f~~~ 381 (453) T protein:vir:39 308 FQTTMVANISDESF--GSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLYCELSTNVS-NK---EAWKDIEYTFTRN 381 (453) T ss_pred HHHhCCcccccccc--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-Cc---cccccceEEeCCC Confidence 99888875322221 111110 111223344455555555544433211 11 1112344555667 Q ss_pred hhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 343 LRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 343 ~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) +..|..+.++.+.++ +|+++.--+.++++.-+.|. .+.+.-- +-..............+...+.+++++| T Consensus 382 ~p~~~~~~a~~~~kl--~g~is~et~l~~l~~v~D~~~E~~ri~~E-~~~~~~~~~~~~~~~~~~~~~~~~~~~e 453 (453) T protein:vir:39 382 EPKDIKEQAETANIL--MGITSQETALSVISVIPDVQAEMEKIKKE-EASTAIFDKDKQPSEKGTDTVVPETNEE 453 (453) T ss_pred CCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHH-HHHHHHHHHhccCCCCCCCCCCCCcCCC Confidence 788899999998887 68899988888886543221 1110000 0000000000111111222222333333 No 173 >protein:vir:94805 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1531 # MgeName: 29 # Cross-refs: genbank:acc:YP_240531;genbank:gi:66396197;genbank:GeneID:5133585 Probab=98.57 E-value=2.6e-07 Score=56.68 Aligned_cols=381 Identities=11% Similarity=0.010 Sum_probs=180.5 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccc---------cccc--cccHHHHhccHHHHHHHHHHHHhhccCcceEE Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKT---------ASGE--RVSESNSLVQPDIFACVNVLSDDIAKLPIHTY 69 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~--~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 69 (416) -.+.++..+...... -...+..++.+... .... ......-+..+....+|+..+..+-.-|+.+. T Consensus 47 ~~i~~~i~~~~~~~~----r~~~l~~YY~g~~~I~~~~~~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~G~p~~~~ 122 (492) T protein:vir:94 47 EMIVRYIKQHLEKLP----EISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKPIAFK 122 (492) T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHhccccccccccccccccccccccccccccccchHHHHHHHHHhhhcccCceec Confidence 111111111110000 01112222222100 0000 00011113356777888988888888887753 Q ss_pred eecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC--Cc Q lcl|Aclame:pro 70 KRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT--TG 147 (416) Q Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~--~~ 147 (416) ..+ +.. . ..+..++. | ........+..+++.+|.+|.++..++.|++ .+..++|..+.+..++. +. T Consensus 123 ~~d-~~~----~-~~l~~~~~--n---~~~~~~~~~~~~a~~~G~a~~~v~~d~dg~~-~~~~~~p~~~~~v~d~~~~~~ 190 (492) T protein:vir:94 123 HTD-DEV----V-KRIDEVLG--N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTDKEHEE 190 (492) T ss_pred cCc-hHH----H-HHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEEEecCCCce-EEEEEcccceEEEEcCCCCCc Confidence 222 111 1 11222322 2 2345667788999999999999999888876 57778888888877632 22 Q ss_pred EEE----EEEeeCCeeEEechhheeeecc----------------------CC---------CCccccccHHHHHHHHHH Q lcl|Aclame:pro 148 MLW----YQTVLNGKAIELYDYEVLHFKG----------------------LS---------TDGIHGKSPIGVVREHIG 192 (416) Q Consensus 148 ~~~----~~~~~~~~~~~~~~~~vih~~~----------------------~~---------~~~~~G~s~~~~~~~~i~ 192 (416) ..+ |..........+.+..+.++.. ++ .+...|.|.++.+...++ T Consensus 191 ~~a~ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~sd~e~v~~liD 270 (492) T protein:vir:94 191 LEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYKTLID 270 (492) T ss_pred eEEEEEEEeeccceeEEEEecCeEEEEEEecCeeeeccccccccccccccccCCCccceEEecCCCCCCCchHHHHHHHH Confidence 211 1111111001111112222110 00 012358888888888888 Q ss_pred HHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHH Q lcl|Aclame:pro 193 AQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKA 272 (416) Q Consensus 193 ~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~ 272 (416) ....+..-..+.+...+.|-.+++--.. +....+.+. ....+++.++++.+...+........+....+...+ T Consensus 271 a~d~~~S~~~~~~~~~~~p~lv~~g~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 343 (492) T protein:vir:94 271 AYNRRLSDLSNTFKDSNELTYVLKNYDD---QELPEFKRL----LRYYGAIKVSDNGGVDTIQVEVPVENSKKYLDELYQ 343 (492) T ss_pred HHHHHHHHHHHHHHHhcCceeeeecCCc---ccchhhHHH----HhhccceecCCCCcceeEeccCCHHHHHHHHHHHHH Confidence 7777777777777777778776654221 111222221 223345556666555555555555566677788888 Q ss_pred HHHHHhccchhhcccccCCCcccHHH-------------HHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhh Q lcl|Aclame:pro 273 QISMIYKVPLHKLNELDKATFSNIEH-------------QSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNI 339 (416) Q Consensus 273 ~Ia~~~gvp~~~lg~~~~~~~s~~e~-------------~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~ 339 (416) .|+..-++|..-.+.. +++-|. ++ .....+...|..+++.|...++.+ . ....+.+.+ T Consensus 344 ~I~~~s~~p~~~~~~~-~~n~Sg-~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~~-----~--~~~~i~v~f 414 (492) T protein:vir:94 344 KIMLFGQAVDFSSDKF-GSAPSG-VALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIK-----G--EHKDVDISF 414 (492) T ss_pred HHHHHhCCcCCCcccc-ccCchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----c--ccceeeEEe Confidence 8888888875333221 122111 11 122233334444444444433321 1 122345555 Q ss_pred hhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeecc--CccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 340 DSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSL--NYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 340 ~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~--n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) +.-+..+..+.++.+.++ .|+++.--++++++.-+.|. .+++---. ...............+++..+.++.++| T Consensus 415 ~~~~p~~~~e~~~~~~kl--~giiS~et~~~~l~~v~d~~~E~eri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~e 492 (492) T protein:vir:94 415 NYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQMEYNKQLPNLDDGGADSAQQQERSNNKESE 492 (492) T ss_pred cCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHHHHHhhccccccccCCCCccccCCccccCC Confidence 666778899999999988 48999988888886643221 11110000 0000000000000000000000111111 No 174 >protein:vir:103951 Length: 511 # NCBI annotation: phage portal protein # Family: family:all:125 # MgeID: mge:1662 # MgeName: phiNM # Cross-refs: genbank:acc:YP_873988;genbank:gi:118430763;genbank:GeneID:4525445 Probab=98.56 E-value=2.9e-07 Score=56.44 Aligned_cols=393 Identities=11% Similarity=0.034 Sum_probs=190.8 Q ss_pred Cc---chhhhccccccccccccchhHHHhhhcCccc------cccccccHHHHhccHHHHHHHHHHHHhhccCcceEEee Q lcl|Aclame:pro 1 ML---LERMFEKRSGSSDHEDGFNNILLNMFGGRKT------ASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKR 71 (416) Q Consensus 1 m~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 71 (416) |. +.++..+......+ -...+..++.+... ........+.-+........|+..+.-+-+-|+.+-.. T Consensus 40 ~~~~~i~~~i~~~~~~~~~---r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~ 116 (511) T protein:vir:10 40 QNVNEVSKCIEHHMDYQRP---RLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDD 116 (511) T ss_pred cCHHHHHHHHHHHHHhhHH---HHHHHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCceeecC Confidence 11 11111110000000 00111222221110 00000001111224566777888888888888876432 Q ss_pred cCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCc--EE Q lcl|Aclame:pro 72 TDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTG--ML 149 (416) Q Consensus 72 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~--~~ 149 (416) +++ .. ..+..++.. -........+..+++.+|.||.++.++++|.+ .+..++|..+.+..++... .. T Consensus 117 d~~-----~~-~~l~~~~~~----n~~~~~~~~~~~~~~i~G~ay~~vy~dedg~~-~i~~~~p~~~~~vydd~~~~~~~ 185 (511) T protein:vir:10 117 DKD-----VL-EAIEAFNDL----NDVESHNRSLGLDLSIYGKAYEIMIRNQDDET-RLYKSDAMSTFVIYDNTIERNSI 185 (511) T ss_pred chH-----HH-HHHHHHHhh----cCHHHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCCCCCceE Confidence 111 11 122223222 13446777788899999999999999988875 5677888888887775431 11 Q ss_pred ----EEEEee-CC---e---eE-EechhheeeeccCC--------------------------CCccccccHHHHHHHHH Q lcl|Aclame:pro 150 ----WYQTVL-NG---K---AI-ELYDYEVLHFKGLS--------------------------TDGIHGKSPIGVVREHI 191 (416) Q Consensus 150 ----~~~~~~-~~---~---~~-~~~~~~vih~~~~~--------------------------~~~~~G~s~~~~~~~~i 191 (416) +|.... .+ . .. .+.++.++++.... .+...|.|.++.+...+ T Consensus 186 ~~vr~~~~~~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~f~nn~~g~gd~e~v~~li 265 (511) T protein:vir:10 186 AGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLI 265 (511) T ss_pred EEEEEEEeeecccCccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcceeEEEecCCCCCCCchhhhHHHH Confidence 111110 00 0 01 12333333321100 11235788888888888 Q ss_pred HHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHH-----hhcCCceeecCCCceeEeccCChhhHHHHHH Q lcl|Aclame:pro 192 GAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKR-----VNKVENIAIIDYGLEYQSISMPLQEAQFVES 266 (416) Q Consensus 192 ~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~-----~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~ 266 (416) +....+.....+.+...+.|-.+++-....+++.....++...- ....+...-.+++.++..+........+... T Consensus 266 Da~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~e~~ 345 (511) T protein:vir:10 266 DLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAY 345 (511) T ss_pred HHHHHHHHHHHHHHHHhhCceeeeeccccCCchhhccchhccceecccccccccccccCCCCcceeEEeecCCHHHHHHH Confidence 87777666667777777777777765444454444433322110 0111112223456666666666666777788 Q ss_pred HHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccc Q lcl|Aclame:pro 267 MKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHY 334 (416) Q Consensus 267 ~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~ 334 (416) .+...+.|+..-++|..-.+... |+-|.. .......+..+|.-.++.|...+...--... ...-.. T Consensus 346 ~~~L~~~I~~~s~~P~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~~~~~~~-~~d~~~ 423 (511) T protein:vir:10 346 KDRLNSDIHMFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDA-NKDFNT 423 (511) T ss_pred HHHHHHHHHHHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc-ccccce Confidence 88899999999999875433221 222211 1122333444444444444444433211100 011123 Q ss_pred hhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccccccccc-----ccccCCcccCC Q lcl|Aclame:pro 335 VKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEY-----QRLKAGGAMKG 409 (416) Q Consensus 335 ~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~-----~~~~~~~~~~g 409 (416) +++.+..-+..|..+.++.+.++. |+++.--+.+++++-+.|. +++- . ...+..... .....++..+. T Consensus 424 i~i~f~~~~p~d~~~~~~~~~kl~--G~iS~et~~~~l~~v~d~~-~E~~-r---i~~E~~~~~~~~~~~~~~~~~~~~~ 496 (511) T protein:vir:10 424 VRYVYNRNLPKSLIEELKAYIDSG--GKISQTTLMSLFSFFQDPE-LEVK-K---IEEDEKESIKKAQKGIYKDPRDIND 496 (511) T ss_pred eeEEeCCCCCcCHHHHHHHHHHHh--ccCcHHHHHHhCCCCCCHH-HHHH-H---HHHHHHHHHHHHhhhcccCCCCCCC Confidence 566667778889999999999884 8899888888876533211 0000 0 000000000 00011111112 Q ss_pred CCccCCC Q lcl|Aclame:pro 410 GDNKNEG 416 (416) Q Consensus 410 ge~~~~~ 416 (416) +++++++ T Consensus 497 ~~~~~~~ 503 (511) T protein:vir:10 497 DEQDDDT 503 (511) T ss_pred CCCCCcc Confidence 2222222 No 175 >protein:vir:9306 Length: 511 # NCBI annotation: phi Mu50B-like protein # Family: family:all:125 # MgeID: mge:165 # MgeName: phi 11 # Cross-refs: genbank:acc:NP_803284;genbank:gi:29028594;genbank:GeneID:1258040 Probab=98.54 E-value=3.2e-07 Score=56.19 Aligned_cols=396 Identities=11% Similarity=0.027 Sum_probs=189.3 Q ss_pred Cc---chhhhccccccccccccchhHHHhhhcCcccc------ccccccHHHHhccHHHHHHHHHHHHhhccCcceEEee Q lcl|Aclame:pro 1 ML---LERMFEKRSGSSDHEDGFNNILLNMFGGRKTA------SGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKR 71 (416) Q Consensus 1 m~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 71 (416) +. +.++.++......+ -...+..++.+.... .........-...+.....|+..+.-+-.-|+.+-.. T Consensus 40 ~~~~~i~~~i~~~~~~~~~---r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~ 116 (511) T protein:vir:93 40 QNVNEVSKYIEHHMDYQRP---RLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDD 116 (511) T ss_pred ccHHHHHHHHHHHHHhhHH---HHHHHHHHhcccCccccccCcCcccccCcceeecchHHHHHHHHhhhhcccCeeeccC Confidence 11 11111110000000 001112222211100 0000000111234566777888888887888775322 Q ss_pred cCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC--cEE Q lcl|Aclame:pro 72 TDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT--GML 149 (416) Q Consensus 72 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~--~~~ 149 (416) ++ . .. ..+..++.. -........+..+++.+|.||.++.+++.|.+ .+..++|..+-+..++.. ... T Consensus 117 d~-~----~~-~~l~~~~~~----n~~~~~~~~~~~~~~~~G~ay~~vy~de~~~~-~i~~~~p~~~~~vydd~~~~~~~ 185 (511) T protein:vir:93 117 DK-D----VL-EVIEAFNDL----NDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNTIERNSI 185 (511) T ss_pred Ch-H----HH-HHHHHHHhh----cCHhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCCCCCceE Confidence 11 1 11 122223222 24556778888999999999999999988876 467788988888777542 222 Q ss_pred E----EEEee-CC---e---eE-EechhheeeeccCC--------------------------CCccccccHHHHHHHHH Q lcl|Aclame:pro 150 W----YQTVL-NG---K---AI-ELYDYEVLHFKGLS--------------------------TDGIHGKSPIGVVREHI 191 (416) Q Consensus 150 ~----~~~~~-~~---~---~~-~~~~~~vih~~~~~--------------------------~~~~~G~s~~~~~~~~i 191 (416) + |.... .+ . .+ .+.++.+++++... .+...|.|.++.+...+ T Consensus 186 ~~vr~~~~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~gd~e~v~~li 265 (511) T protein:vir:93 186 AGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLI 265 (511) T ss_pred EEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCccccccccccccccCCCccceEEecCCCCCCCchhhHHHHH Confidence 1 11110 00 0 01 12333333321110 01235788888888888 Q ss_pred HHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHH-h----hcCCceeecCCCceeEeccCChhhHHHHHH Q lcl|Aclame:pro 192 GAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKR-V----NKVENIAIIDYGLEYQSISMPLQEAQFVES 266 (416) Q Consensus 192 ~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~-~----~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~ 266 (416) +....+.....+.+...+.|-.+++-....+.+.....++...- . .-.+...-.+++.++..++.......+... T Consensus 266 Da~d~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 345 (511) T protein:vir:93 266 DLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAY 345 (511) T ss_pred HHHHHHHHHHHHHHHHhhCcceeeecCcccCchhhcccccccceecccccccccccccCCCCcceeEEeecCCHHHHHHH Confidence 87777777767777777777777765444444444333221110 0 001111223456666666655566667788 Q ss_pred HHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccc Q lcl|Aclame:pro 267 MKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHY 334 (416) Q Consensus 267 ~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~ 334 (416) .+...+.|+..-++|..-.+... ++-|.. .......+..+|.-.++.|...++.+--.... ..-.. T Consensus 346 ~~~L~~~I~~~s~~P~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~l~~~~~~~~~-~d~~~ 423 (511) T protein:vir:93 346 KDRLNSDIHMFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTWSIDAN-KDFNT 423 (511) T ss_pred HHHHHHHHHHHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc-ccccc Confidence 88889999999999865443221 222211 11122344445555555555444432111100 11123 Q ss_pred hhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCccccccccccccccCCcccCCCCc Q lcl|Aclame:pro 335 VKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDN 412 (416) Q Consensus 335 ~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~ 412 (416) +++.+..-+..+..+.++.+.++ .|+++.--+.+++++-+.|. .+.+---.. ...+... ..........+.+++ T Consensus 424 i~~~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~l~~v~d~~~E~~ri~~E~~-~~~~~~~-~~~~~~~~~~~~~~~ 499 (511) T protein:vir:93 424 VRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEK-ESIKKAQ-KGIYKDPRDINDDEQ 499 (511) T ss_pred ceEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHH-HHHHHHh-hhcccCCCCCCCCCC Confidence 55556677788899999998888 58999988888876543221 010000000 0000000 000000111111122 Q ss_pred cCCC Q lcl|Aclame:pro 413 KNEG 416 (416) Q Consensus 413 ~~~~ 416 (416) ++++ T Consensus 500 ~~~~ 503 (511) T protein:vir:93 500 DDDT 503 (511) T ss_pred CCcc Confidence 2222 No 176 >protein:vir:9871 Length: 429 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795633;genbank:gi:28876408;genbank:GeneID:1257942 Probab=98.52 E-value=3.9e-07 Score=55.73 Aligned_cols=370 Identities=13% Similarity=0.027 Sum_probs=178.9 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCc-------cccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGR-------KTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) =++.++.++........ ..+..++-+. ..... ....-+..+....+|+..+..+-.-|+.+...+ T Consensus 4 ~~l~~~i~~~~~~~~r~----~~l~~yy~g~~~il~~~~~~~~---~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~~- 75 (429) T protein:vir:98 4 DLLSELIQKHRSFNLSY----SAYKQLYEGDHAILQQKQKEQY---KPDNRLVVNFAKYIVDTFNGYFIGVPVQTSHEN- 75 (429) T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHhccccccccccccccC---CCcceeecchHHHHHHHHhhhhcccCceeecCC- Confidence 00111111100000000 0001111110 00000 011123456778889999988888887754321 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCc--EEE- Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTG--MLW- 150 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~--~~~- 150 (416) +. .. ..+..+... | ........+..+.+.+|.||+++..+++|++ .+..++|..+.+..++... ..+ T Consensus 76 ~~----~~-~~l~~~~~~-n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~~~~~~p~~~~~v~dd~~~~~~~~~ 145 (429) T protein:vir:98 76 KQ----VS-NYLELLDGY-N---DQDDNNAELSKICSIYGHGYELVFNDENAEA-GITYLTPLEAFIVYDDSIRQKPLFA 145 (429) T ss_pred hH----HH-HHHHHHHhh-c---CHhHHHHHHHHHHhhcCeEEEEEEecCCCcE-EEEEEcccceEEEEeCCCCCceEEE Confidence 11 11 122333333 2 3346778888999999999999999998976 4667888888777664332 111 Q ss_pred -EEEeeCCe--eEEechh--------------------------heeeeccCCCCccccccHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 -YQTVLNGK--AIELYDY--------------------------EVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYN 201 (416) Q Consensus 151 -~~~~~~~~--~~~~~~~--------------------------~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~ 201 (416) +.+...+. ...+... .|++++ +...|.|.++.+...++......... T Consensus 146 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~----n~~~g~sd~e~v~~liD~~d~~~s~~ 221 (429) T protein:vir:98 146 VRYFYNKGGVLEGSYSDASNITYFKDGEKGIEIGESEPHPFDGVPMIEYV----ENEERQSLLASVVTLINAFNKAISEK 221 (429) T ss_pred EEEEEecCceEEEEEEeCceEEEEEecCCceEecccccccCCccceEEec----CCCCCCCcHHHHHHHHHHHHHHHHHH Confidence 11111110 0011111 122222 23468888888888888777777777 Q ss_pred HHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCC----CceeEeccCChhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 202 AKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDY----GLEYQSISMPLQEAQFVESMKFNKAQISMI 277 (416) Q Consensus 202 ~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~----g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~ 277 (416) .+.+...+.|-.+++-- ..+++..+.++ ..+++.++. +.+...+..+.....+.+..+...+.|+.. T Consensus 222 ~~~~~~~~~p~~~i~g~-~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~ 292 (429) T protein:vir:98 222 ANDVEYFADAYLKILGA-ELDDETLKSLR--------DTRIINLKDTDAQQLTVEFLQKPDADATQEHLLDRLENLIFRT 292 (429) T ss_pred HHHHHHhcCceeeeecC-CCCcchhhhHh--------hCceeeccCCCCCCcceeEEeecCCHHHHHHHHHHHHHHHHHH Confidence 77777777787776532 23333322221 123343321 234444444444555667778889999999 Q ss_pred hccchhhcccccCCCcccHHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhh Q lcl|Aclame:pro 278 YKVPLHKLNELDKATFSNIEHQ-------------SIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELR 344 (416) Q Consensus 278 ~gvp~~~lg~~~~~~~s~~e~~-------------~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~ 344 (416) -++|..-.... |+-| .++. ....+..++.-+++.+...++..-- . .....+.+.+...+. T Consensus 293 s~~p~~~~~~~--gn~S-g~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~-~---~d~~~i~v~f~~~~p 365 (429) T protein:vir:98 293 AMVANISDESF--GTAS-GIALRYRLQAMDNLAKTKERKFMSGMNRRYKLIASYPTSKIG-P---KDWIGIKYKFTRNLP 365 (429) T ss_pred hCccccCcccc--ccch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-c---cccccceEEeCCCCC Confidence 99985333221 2211 1111 1122233333333333333322111 0 111224555567788 Q ss_pred ccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 345 GDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 345 ~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) .|..+.++.+.++ +|+++.--+.++++.-+.|.- ++ .-...+.....+.....-..+.++++.+ T Consensus 366 ~~~~~~a~~~~kl--~g~is~et~~~~l~~v~d~~~-E~----~ri~~E~~~~~~~~~~~~~~~~~~~~~~ 429 (429) T protein:vir:98 366 ANLLEESQIAGNL--AGIVSEETQVGVLSIVENPQK-EI----ERKNSDKSTLISRQAGGLNGQNTTTILE 429 (429) T ss_pred cCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHH-HH----HHHHHHHHHHHHHHHhhhcCCCCCCCCC Confidence 8999999999887 689998778888865332210 00 0000011111111111112222333333 No 177 >protein:vir:96494 Length: 501 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1620 # MgeName: 2972 # Cross-refs: genbank:acc:YP_238488;genbank:gi:66391764;genbank:GeneID:5176916 Probab=98.51 E-value=4.1e-07 Score=55.62 Aligned_cols=398 Identities=11% Similarity=0.017 Sum_probs=190.9 Q ss_pred Cc----chhhhccccccccccccchhHHHhhhcCcccc------ccccccHHHHhccHHHHHHHHHHHHhhccCcceEEe Q lcl|Aclame:pro 1 ML----LERMFEKRSGSSDHEDGFNNILLNMFGGRKTA------SGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYK 70 (416) Q Consensus 1 m~----~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 70 (416) +- +.++.........+ -...+..++.+.... ......+..-+..+....+|+..+.-+-.-|+++.. T Consensus 38 ~~~~~~i~~~i~~~~~~~~~---r~~~~~~yY~g~~~~i~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~g~p~~~~~ 114 (501) T protein:vir:96 38 VNNWELLKNFINHHKLRQAP---RIQELLDYARGENHDVLKSGRRKDNEMADKRAVHNYGRMISKFKTGYLAGNPIRVEY 114 (501) T ss_pred CChHHHHHHHHHHHHHHHHH---HHHHHHHHhcCCCCcccCccccCccccccceeecchHHHHHHHHhhhhcccCeeEee Confidence 11 12221110000000 001111122111000 000000111234667788889888888888887754 Q ss_pred ecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC--CcE Q lcl|Aclame:pro 71 RTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT--TGM 148 (416) Q Consensus 71 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~--~~~ 148 (416) .+++.. ..+...| .+....-........+..+++.+|.||+++.++..|.+ .+..++|..+.+..++. +.. T Consensus 115 ~~~~~~-----~~~~~~l-~~~~~~n~~~~~~~~~~~~~~~~G~a~~~v~~dedg~~-~i~~~~p~~~~~v~d~~~~~~~ 187 (501) T protein:vir:96 115 DDNDDN-----SQNDDAI-KRIGRINDLDSLNRTLIRDLSQTGRAYEVIYRSEYDET-RIKRLSPLETFVIYDNSLEDNS 187 (501) T ss_pred CCccch-----hHHHHHH-HHHHHhcCHHHHHHHHHHHHhhcCeEEEEEEEcCCCce-EEEEEccceeEEEEcCCCCCce Confidence 332211 1111112 22222235567888899999999999999999988876 46778898888888754 222 Q ss_pred E----EEEEeeC-Ce--eE-Eechhheeeecc----------CC----------CCccccccHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 149 L----WYQTVLN-GK--AI-ELYDYEVLHFKG----------LS----------TDGIHGKSPIGVVREHIGAQAAATKY 200 (416) Q Consensus 149 ~----~~~~~~~-~~--~~-~~~~~~vih~~~----------~~----------~~~~~G~s~~~~~~~~i~~~~~~~~~ 200 (416) . +|..... +. .+ .+.++.++++.. .+ .+...|.|.+..+...++....+... T Consensus 188 ~~~v~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~d~~~s~ 267 (501) T protein:vir:96 188 IAAVRYYNRGTLQSAKDVVEIYTDEHIYTLDASDDFNEISVTTHAFGTVPITEYLNNIDGIGDYETELYLIDLYDSAESD 267 (501) T ss_pred EEEEEEEEeecCCCcEEEEEEEcCCcEEEEeeCCCceeccccccCCCccceEEecCCccCCCchhhhHHHHHHHHHHHHH Confidence 1 1111111 11 01 112222222110 00 12235888888888888877777777 Q ss_pred HHHHHhccCCcceeeccCCcC-CHHHHHHHHHHH-HHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 201 NAKLYKNEATPRGILKVPAFL-DEKPKENVRKEW-KRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIY 278 (416) Q Consensus 201 ~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~-~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~ 278 (416) ..+.+...+.|-.+++-.... ..+....++... -.....+.......+.++.-+.....+..+....+...+.|+.+- T Consensus 268 ~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s 347 (501) T protein:vir:96 268 TANHMSDMADAILAIYGDLALPKGMQASDMKRTRLMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAYKTRLNRDIHIFT 347 (501) T ss_pred HHHHHHHhcCceeeeecccccCcccchhhhhhcCeeeecccccccccccCcceeeEeccCCHHHHHHHHHHHHHHHHHHh Confidence 777777777777666543222 222222222111 011111112223344555555555555667788888899999999 Q ss_pred ccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhcc Q lcl|Aclame:pro 279 KVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGD 346 (416) Q Consensus 279 gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d 346 (416) ++|..-.+... ++-|... ......+..+|.-+++.+...++..--.. ......+.+.+...+..+ T Consensus 348 ~~p~~~~~~~~-~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~--~~d~~~i~i~f~~~~p~n 424 (501) T protein:vir:96 348 NTPDMSDTNFS-GNTSGEALKYKLFGLDQDRVDTQSQFTKGLKRRYRLAARIGSLVNEFK--DFDESLLKITFTPNLPKS 424 (501) T ss_pred CCcccCccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--ccccccceEEeCCCCCcC Confidence 99875554322 2222111 11223444444444444444443321110 111122455556778889 Q ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeE----------eeccCccccccccccccccCCcccCCCCccC Q lcl|Aclame:pro 347 SKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKY----------ISSLNYVFLDFLEEYQRLKAGGAMKGGDNKN 414 (416) Q Consensus 347 ~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~----------~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~ 414 (416) ..+.++.+.++. |+++..-+.+++++-..|. .+.+ ..+..+.+.. .......+. ...+.+|+.. T Consensus 425 ~~e~ad~~~kl~--g~iS~et~~~~l~~v~D~~~E~~ri~~E~~~~~~~~~~~~~~~~~-~~~~~~~~e-~~~d~~e~~~ 500 (501) T protein:vir:96 425 LNEQVSILTGLG--GQVSQETALSLSGLVESPNEELDKINKEMSEIDFKGYSNDFNEHV-GKYTDEVKE-THTDDFEREY 500 (501) T ss_pred HHHHHHHHHHHh--ccCchHHHHHhCCCCCCHHHHHHHHHHHHHHhhccccccchhhcc-cccCCcCCC-CCCCcccccc Confidence 999999999884 8899888888776533211 1110 0000110100 000111111 1122233333 Q ss_pred C Q lcl|Aclame:pro 415 E 415 (416) Q Consensus 415 ~ 415 (416) | T Consensus 501 ~ 501 (501) T protein:vir:96 501 E 501 (501) T ss_pred C Confidence 3 No 178 >protein:vir:103219 Length: 201 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1605 # MgeName: JK06 # Cross-refs: genbank:acc:YP_277473;genbank:gi:71834115;genbank:GeneID:3562330 Probab=98.49 E-value=1.8e-08 Score=63.01 Aligned_cols=186 Identities=12% Similarity=0.059 Sum_probs=99.4 Q ss_pred eeccCCc---CCHHHHHHHHHHHHHh---hc-CCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcc Q lcl|Aclame:pro 214 ILKVPAF---LDEKPKENVRKEWKRV---NK-VENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLN 286 (416) Q Consensus 214 v~~~~~~---~~~e~~~~~~~~~~~~---~~-~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg 286 (416) |++.++- ++. ..+.+++++... .. .+.+++...+.+|..++.+...+. +........||.+-|||...|- T Consensus 1 V~k~~~l~~~~~~-~~~~~~~r~~~~~~~~~~~~~~~ld~~~e~~e~~~~~lsGl~--d~l~~~~~~iaa~s~iP~t~Lf 77 (201) T protein:vir:10 1 MWKAKGLADLCDD-SDGAARLRLAQVDNNSGVGQAIGIDADSEEYNVLNSDIGGID--TFLSQKFDRIVALSGIHEIILK 77 (201) T ss_pred CccchHHHHHhcC-ChHHHHHHHHHHHHhhhhhhhheeecCCcceeeeecCcCChH--HHHHHHHHHHHhHhcCchhhhc Confidence 5555431 111 112344444432 22 233455556688888888777444 6778888999999999999887 Q ss_pred cccCCCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHH-------HHHHHHH Q lcl|Aclame:pro 287 ELDKATFS-NIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQA-------EYLKTLH 358 (416) Q Consensus 287 ~~~~~~~s-~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~-------~~~~~~~ 358 (416) +...+..+ +-+...++||.. |.-+++....-+-.+|+.-..... .+.|.+++|...+.++++ +++.+++ T Consensus 78 G~sp~Glnatge~d~~nyyd~-i~~~Qe~~l~p~le~l~~~~~~~~--~~~~~f~pL~~~s~kekAei~~~~a~a~~~~~ 154 (201) T protein:vir:10 78 GKNVGGVSASQNTALETFYGY-VDRKRKAELLPLLEFLLPFIVTEQ--EWSVEFNPLSQVSDKDKSEILEKNVNSVAALI 154 (201) T ss_pred CCCCccccccchhHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCCC--CceEeeCCCCCCCHHHHHHHHHHHHHHHHHHH Confidence 66655443 445555566654 333332222222222222112222 355566677777776555 5677788 Q ss_pred hCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCcc Q lcl|Aclame:pro 359 ETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNK 413 (416) Q Consensus 359 ~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~ 413 (416) ++|+++++|+|+.|--.+..++ ++-+-++.+.. .....++.+-++|+ T Consensus 155 ~~g~i~~~e~r~~L~~~~~~~~----~~~~~~~~~~~----~~e~~dp~~~~~~~ 201 (201) T protein:vir:10 155 AAGIIDADEARDTLRAISTEVK----IGEGSIQTEVV----INESEDPLDVSANN 201 (201) T ss_pred HcCCCCHHHHHHHHHhcCCcCC----CCCCCCCcccc----ccccCCCCCCCCCC Confidence 9999999999998855443221 11111111110 11111222223333 No 179 >protein:vir:78537 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1853 # MgeName: U2 # Cross-refs: genbank:acc:YP_001491582;genbank:gi:157786405;genbank:GeneID:5625689 Probab=98.48 E-value=4.8e-07 Score=55.22 Aligned_cols=393 Identities=13% Similarity=0.069 Sum_probs=164.9 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--ccccccH---HHHhccHHHHHHHHHHHHhhccCcceEEeecCCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGERVSE---SNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG 75 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 75 (416) =++.++.+........ ...+..++-|-... .+..+.. +.-....+..-+|+..+..+--..|.+ .++. T Consensus 6 d~i~~L~~~~~~~~~r----~~~~~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~---~~d~ 78 (480) T protein:vir:78 6 EHVERLQGLLARDLPN----LLEAEAYRNGTRRLKTIGIGAPPELAYLDVQPGWVATYLRTLSDRLDIEGFRI---SEDS 78 (480) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHhccccchhcccccchhhhhhhhhcchHHHHHHHHHhhhccCceec---CCCc Confidence 0111111111000000 00011111111000 0000000 111223455667777776654334322 1111 Q ss_pred ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec------CCCcEEEEEeeccceEEEEEcCCC--c Q lcl|Aclame:pro 76 IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG------SHGYPEALFPLRPDYTNAYVHPTT--G 147 (416) Q Consensus 76 ~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~------~~g~~~~l~~l~p~~v~~~~~~~~--~ 147 (416) .....+.. ++.+ | ........+..+.+.+|.||.++.+. ..|.+ .+.+++|..+.+..++.. . T Consensus 79 ---~~~~~l~~-i~~~-N---~~~~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~~~~-~i~~~~p~~~~~i~D~~~~~~ 149 (480) T protein:vir:78 79 ---EGLEELWN-WWQA-N---DLDEESVLGHDDSLTFGRAYITVSHPDVESGDPAGIP-LIRVESPLYMYAELDPRNTRR 149 (480) T ss_pred ---hhHHHHHH-HHHh-c---CHHHHHHHHHHHHhhcCceEEEeecCccccCCCCCee-EEEEEcccceEEEEcCCCccc Confidence 11122333 3332 2 23567788899999999999998753 34544 577888888888877532 1 Q ss_pred EEE----EEEeeC------------CeeEEe---------------------chhheeeeccCC-CCccccccHHHH-HH Q lcl|Aclame:pro 148 MLW----YQTVLN------------GKAIEL---------------------YDYEVLHFKGLS-TDGIHGKSPIGV-VR 188 (416) Q Consensus 148 ~~~----~~~~~~------------~~~~~~---------------------~~~~vih~~~~~-~~~~~G~s~~~~-~~ 188 (416) ..+ |..... +..+.+ ..=.|+||.+.. ..+.+|.|.+.. +. T Consensus 150 ~~~~i~~~~~~d~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~sdi~~~i~ 229 (480) T protein:vir:78 150 VTRAVRLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGRSEISPELR 229 (480) T ss_pred eEEEEEEEEeecCCcceEEEEEEeCCeEEEEEecCCCcccccccccccccCCCCcceEEeecccccCCccCccchhHHHH Confidence 111 100000 000110 111345555432 234568776653 34 Q ss_pred HHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecC-CCceeEeccCChhhHHHHHHH Q lcl|Aclame:pro 189 EHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIID-YGLEYQSISMPLQEAQFVESM 267 (416) Q Consensus 189 ~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~-~g~~~~~~~~~~~d~~~~e~~ 267 (416) ..++..............-.+.|..++.- ....+...+.-...|.. ..+.++.++ ++.++.++....- -.+.+.. T Consensus 230 ~l~Da~~~~~s~~~~~~~~~a~p~~~i~G-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 305 (480) T protein:vir:78 230 KVTDAASRTLMNLQSASQILGTPLRVISG-VTTDELTNDGENTTLDI--YYGRILTLASEAAKISEFKAAEL-RNFAEEM 305 (480) T ss_pred HHHHHHHHHHHHHHHHHHhhcchhhhhhC-CCccccccccccchhhh--hhhhhccCCCCCceEEecCccCH-HHHHHHH Confidence 44444333333333334444455544432 11111111111111211 123344443 4567766554332 2467878 Q ss_pred HHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHH----HHHHHHHhh------cCchhcccccchhh Q lcl|Aclame:pro 268 KFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVN----FEQELNVKL------FLDHDQKSGHYVKF 337 (416) Q Consensus 268 ~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~----i~~~l~~~l------~~~~~~~~~~~~~f 337 (416) +..+..|+..-++|+..+|.... +.++ ..+. .+....|.-.+.. +...|.+.+ ...........+++ T Consensus 306 ~~~i~~~~~~~~~p~~~fg~~~~-n~~S-g~Al-~~~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~~~~~~~~~~~i~v 382 (480) T protein:vir:78 306 EVFRKEAASITGLPPQYLSSSSE-NPAS-AEAI-IATDSRIVKMAERKGRIFGGAWERAMRIAMQIMGREVTEEYTRLET 382 (480) T ss_pred HHHHHHHhcccCCCHHHhccccC-chhH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeE Confidence 88899999999999999985332 1111 1121 1211222222222 222222111 11111111233455 Q ss_pred hhhhhhhccHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCCC--CCeEeeccCcccccccccc--ccccCCcccCCCC Q lcl|Aclame:pro 338 NIDSELRGDSKTQAEYLKTLHETG--VLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEY--QRLKAGGAMKGGD 411 (416) Q Consensus 338 ~~~~l~~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~--~~~~~~~~~~gge 411 (416) .+.+....+..+.++.+.+++.+| +++..-+++++|+.+.+- ..+........+++..... +..+......+|| T Consensus 383 ~w~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~lg~~~d~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (480) T protein:vir:78 383 VWRDPSTPTVAAKADAVSKLYANGQGPIPKEQARIDLGYTATQREQMRDWDKQETEDMIDTLYSTTKAQADATPKPTVTE 462 (480) T ss_pred EecCCCCCCHHHHHHHHHHHHHhcccCCCHHHHHhcCCCCHhHHHHHHHHHHHHHHHHHHHhhccccCCCccccCCCCCC Confidence 555556778888899999888765 677777788899876431 1111111111111100000 0000001111122 Q ss_pred ccCCC Q lcl|Aclame:pro 412 NKNEG 416 (416) Q Consensus 412 ~~~~~ 416 (416) .+++. T Consensus 463 ~~~~~ 467 (480) T protein:vir:78 463 TKTET 467 (480) T ss_pred CCCcc Confidence 22222 No 180 >protein:vir:97336 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1666 # MgeName: 52A # Cross-refs: genbank:acc:YP_240606;genbank:gi:66396273;genbank:GeneID:5133692 Probab=98.47 E-value=5.2e-07 Score=55.04 Aligned_cols=379 Identities=11% Similarity=0.042 Sum_probs=181.0 Q ss_pred Cc----chhhhccccccccccccchhHHHhhhcCcccc---------ccc--cccHHHHhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 ML----LERMFEKRSGSSDHEDGFNNILLNMFGGRKTA---------SGE--RVSESNSLVQPDIFACVNVLSDDIAKLP 65 (416) Q Consensus 1 m~----~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~a~~~~~v~~~i~~ia~~ia~~~ 65 (416) ++ +.++..+...... -...+..++-+.... .+. ......-+..+....+|+..+..+-.-| T Consensus 43 ~~~~~~i~~~i~~~~~~~~----r~~~l~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~g~p 118 (492) T protein:vir:97 43 ETLEEMIVRYIKQHLEKLP----EISIGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKP 118 (492) T ss_pred hhHHHHHHHHHHHHHHHHH----HHHHHHHHhcccCccccccccccccccccccccccccccchHHHHHHHHhhhhcccC Confidence 11 1111111110000 001112222221000 000 0001111235677788998888888888 Q ss_pred ceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC Q lcl|Aclame:pro 66 IHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT 145 (416) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~ 145 (416) +.+... ++.. . ..+..++. | ........+..+++.+|.||.++..++.|.+ .+..++|..+.+..++. T Consensus 119 ~~~~~~-d~~~----~-~~l~~~~~--n---~~~~~~~~~~~~~~~~G~a~~~v~~d~dg~~-~~~~~~p~~~~~i~d~~ 186 (492) T protein:vir:97 119 IAFKHT-DDEV----V-KRIDEVLG--N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEF-KLFRVPAEQGIPIWTDK 186 (492) T ss_pred ceeccC-chHH----H-HHHHHHHh--c---cHHHHHHHHHHHHhhcCeEEEEEEecCCCce-EEEEEcccceEEEEcCC Confidence 765322 2111 1 11222322 2 2335566778899999999999999888875 57778898888877642 Q ss_pred --CcEE----EEEEeeCCeeEEechhheeeecc----------------------CC---------CCccccccHHHHHH Q lcl|Aclame:pro 146 --TGML----WYQTVLNGKAIELYDYEVLHFKG----------------------LS---------TDGIHGKSPIGVVR 188 (416) Q Consensus 146 --~~~~----~~~~~~~~~~~~~~~~~vih~~~----------------------~~---------~~~~~G~s~~~~~~ 188 (416) +... +|..........+.+..+.++.. .. .+...|.|.++.+. T Consensus 187 ~~~~~~~~vr~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~ 266 (492) T protein:vir:97 187 EHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYK 266 (492) T ss_pred CCCceEEEEEEEeeccceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecCCCCCCCchHhHH Confidence 2221 11111111001111222222210 00 01235788888888 Q ss_pred HHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHH Q lcl|Aclame:pro 189 EHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMK 268 (416) Q Consensus 189 ~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~ 268 (416) ..++....+.....+.+...+.|-.+++--.. +....+.+ .....+++.++++.+...+........+.+..+ T Consensus 267 ~liDa~d~~~S~~~~~~~~~~~~~l~~~g~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 339 (492) T protein:vir:97 267 TLIDAYNRRLSDLSNTFKDSNELTYVLKNYDD---QELPEFKR----LLRYYGAIKVSDNGGVDTIQVEVPVENSKKYLD 339 (492) T ss_pred HHHHHHHHHHHHHHHHHHHhccceeeeecCCc---ccchhHHH----HHhhccceecCCCCcceeEeccCCHHHHHHHHH Confidence 88877777666667777777777666653221 11122222 222334555666666665655556667778888 Q ss_pred HHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchh Q lcl|Aclame:pro 269 FNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVK 336 (416) Q Consensus 269 ~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~ 336 (416) ...+.|+..-++|..-.+.. +++-|.. .......+...+..+++.|...++. .. ....+. T Consensus 340 ~L~~~I~~~s~~p~~~~~~~-~~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~-----~~--~~~~i~ 411 (492) T protein:vir:97 340 ELYQKIMLFGQAVDFSSDKF-GSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDI-----KG--EHKDVD 411 (492) T ss_pred HHHHHHHHHhCCCCCCcccc-ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----Cc--ccceee Confidence 88999999999886443221 1221110 0112233334444544444443331 11 123344 Q ss_pred hhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCccccccccccccccCCcccCC--CCc Q lcl|Aclame:pro 337 FNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQRLKAGGAMKG--GDN 412 (416) Q Consensus 337 f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~~~~~~~~~g--ge~ 412 (416) +.+..-+..+..+.++.+.++ .|+++.--+.++++.-+.+. .+++---.. +.....+....+++..+ ++. T Consensus 412 v~f~~~~p~~~~e~a~~~~kl--~G~iS~et~l~~l~~v~d~~~Eleri~~E~~----~~~~~~~~~~~~~~~~~~~~~~ 485 (492) T protein:vir:97 412 ISFNYNKVANTELQVQTAQQS--MGIVSHETVLENHPFVEDLQAELERIEQEQT----EYNKQLPNLDDGGADSAQQQER 485 (492) T ss_pred EEecCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHH----HHHHhhhccccCCCCCCccccc Confidence 555666778899999999888 58999888888886543221 111100000 00000000001111111 111 Q ss_pred cCCC Q lcl|Aclame:pro 413 KNEG 416 (416) Q Consensus 413 ~~~~ 416 (416) +++. T Consensus 486 ~~~~ 489 (492) T protein:vir:97 486 SNNK 489 (492) T ss_pred cccc Confidence 1111 No 181 >protein:vir:2500 Length: 501 # NCBI annotation: putative portal gp5 # Family: family:all:524 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569741;genbank:gi:18496891;genbank:GeneID:932330 Probab=98.47 E-value=5.3e-07 Score=54.97 Aligned_cols=382 Identities=11% Similarity=0.052 Sum_probs=164.2 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--ccccccHH-----HHhccHHHHHHHHHHHHhhccCcceEEeecC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGERVSES-----NSLVQPDIFACVNVLSDDIAKLPIHTYKRTD 73 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~ 73 (416) -+..+++......... ...+..++-+.... -+..+..+ .-....+..-+|+.++..+--..| ...+ T Consensus 30 ~l~~~l~~~~~~~~~r----l~~l~~YY~G~~~~~~~~~~~~~~~~~~~~~~v~n~~~~ivd~~a~~l~~~gf---~~~d 102 (501) T protein:vir:25 30 ALVADMWRLHISERQW----LDRIYEYTKGLRGRPEVPEGASDEVKELAKLSVKNVLSLVRDSFAQNLSVVGY---RNAL 102 (501) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHhcCCCchhccccCChhhhhhHhhhhcChHHHHHHHHHhhhcccce---ecCC Confidence 1233333322211111 11222222221110 01111110 111234556677766665432333 2222 Q ss_pred CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEc-CCCc--EE- Q lcl|Aclame:pro 74 GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVH-PTTG--ML- 149 (416) Q Consensus 74 ~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~-~~~~--~~- 149 (416) +.. ...+ +.++.+ |. .......+..+++.+|.||+++.+++.|. .+..++|..+.+.++ +... .. T Consensus 103 ~~~----~~~l-~~i~~~-N~---~d~~~~~~~~~a~i~G~ay~~v~~de~~~--~i~~~sp~~~~~iy~D~~~~~~~~~ 171 (501) T protein:vir:25 103 AKE----NDPA-WEMWQR-NR---MDARQAEVHRPALTYGASYVTVTPTDEGP--VFRTRSPRQILAVYADPSVDAWPQY 171 (501) T ss_pred ccc----hHHH-HHHHHh-cC---hhHHHHHHHHHHhhcCceEEEEecCCCCC--eEEEeccccEEEEEecCCCCcceeE Confidence 111 1122 333332 22 34566678899999999999999888874 455678888876543 2221 11 Q ss_pred ---EEEEeeCCe---eEEe-ch----------------------------------------------hheeeeccCCCC Q lcl|Aclame:pro 150 ---WYQTVLNGK---AIEL-YD----------------------------------------------YEVLHFKGLSTD 176 (416) Q Consensus 150 ---~~~~~~~~~---~~~~-~~----------------------------------------------~~vih~~~~~~~ 176 (416) ++....... ...+ .+ =.|+|+.+.... T Consensus 172 ai~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPiv~f~N~~~~ 251 (501) T protein:vir:25 172 ALETWVAQKDAKPHRRGVLYDDTYMYELDLGEVVLGDAGGGQATQQPVNVREVTDVIEHGATFEGKPVCPVVRFVNGRDA 251 (501) T ss_pred EEEEEeeccccCcceeEEEecCeeEEEEecCceeeeeccccccccccccccccccccccccccCCccceeeEeccCcccc Confidence 111100000 0000 00 023444432221 Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecC-CCceeEecc Q lcl|Aclame:pro 177 GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIID-YGLEYQSIS 255 (416) Q Consensus 177 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~-~g~~~~~~~ 255 (416) .-.|.|.++.+...++..............-.+.|..++.-- +.++...++ ...+++++++ ++.++.++. T Consensus 252 ~~~g~sdie~v~~l~Da~~~~~s~~~~~~e~~a~p~~~i~G~---~~~~~~~~~------~~~~~i~~~~~~~~~~~q~~ 322 (501) T protein:vir:25 252 DDMIVGEVAPLILLQQAINSVNFDRLIVSRFGANPQRVISGW---TGSKAEVLK------ASALRVWTFEDPEVKAQAFP 322 (501) T ss_pred CccccchhhhhHHHHHHHHHHHHHHHHHHHhhccHHHHHhCC---CCCccchhh------hcccceeccCCCCceEEEec Confidence 234777665555444444443333333344444453333211 111111111 1234566665 466666554 Q ss_pred CChhhH-HHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHH----HHHHHHHHHHHhh------c Q lcl|Aclame:pro 256 MPLQEA-QFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQP----WIVNFEQELNVKL------F 324 (416) Q Consensus 256 ~~~~d~-~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P----~~~~i~~~l~~~l------~ 324 (416) . .++ .+.+..+.....|+..-++|+..++.... |- +.+.. .+....|.- ..+.+...|.+.+ . T Consensus 323 ~--~~~~~~~~~l~~~i~~i~~~s~~P~~~~~~~~~-N~-Sg~Al--~~~~~~l~~ka~~k~~~f~~~l~~~~rl~~~~~ 396 (501) T protein:vir:25 323 P--ASVEPYNLILEEMLQHVAMVAQISPAQVTGKMI-NV-SAEAL--AAAEANQQRKLAAKRESFGESWEQLLRLAAEMD 396 (501) T ss_pred c--cChHHHHHHHHHHHHHHHhhcCCChhhhccccC-Ch-HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 2 233 37788999999999999999999985432 11 11211 222222222 2222222232211 1 Q ss_pred CchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHH-HhCCCCCC-----------CCCeEee-ccCccc Q lcl|Aclame:pro 325 LDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRE-LLERNPIE-----------NGDKYIS-SLNYVF 391 (416) Q Consensus 325 ~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~-~~gl~p~~-----------ggd~~~~-~~n~~~ 391 (416) ..........+.+.+.+....+..+.++++.++++.|+ +.-.+.. +.|+.+.+ ..+..+- ..+-.+ T Consensus 397 ~~~~~~~~~~i~v~w~~~~~~s~~~~ada~~kl~~~gi-s~et~~~~~~g~~~~~ie~~~~~~~e~~~~~~~~~~~~~~~ 475 (501) T protein:vir:25 397 DDPDTAADSGAEVLWRDTEARSFGAVVDGITKLASAGI-PIEHLLSMVPGMTQQTIQAIKDSLRGGEVKSLVDKLLSNEP 475 (501) T ss_pred CCCccccceeeeEEecCCCCCCHHHHHHHHHHHHhcCC-CHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHhhccCc Confidence 10111122345555667778899999999999998886 4433333 35776521 1111100 001111 Q ss_pred cccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 392 LDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 392 ~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) .+......+.-.....+|+-+.+.| T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~g 500 (501) T protein:vir:25 476 APVPPPPPQAAAQALNEGGVNGNGG 500 (501) T ss_pred CCCCCCCCCCCccccccccCCCCCC Confidence 1111111111111122223333333 No 182 >protein:vir:97171 Length: 512 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1654 # MgeName: 85 # Cross-refs: genbank:acc:YP_239722;genbank:gi:66394876;genbank:GeneID:5130904 Probab=98.46 E-value=5.5e-07 Score=54.89 Aligned_cols=396 Identities=11% Similarity=0.038 Sum_probs=186.9 Q ss_pred Cc---chhhhccccccccccccchhHHHhhhcCcccc------ccccccHHHHhccHHHHHHHHHHHHhhccCcceEEee Q lcl|Aclame:pro 1 ML---LERMFEKRSGSSDHEDGFNNILLNMFGGRKTA------SGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKR 71 (416) Q Consensus 1 m~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 71 (416) +. +.++..+......+ -...+..++.+.... .......+.-.........|+..+.-+.+-|+.+... T Consensus 40 ~~~~~i~~~i~~~~~~~~~---r~~~l~~YY~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~g~p~~~~~~ 116 (512) T protein:vir:97 40 QNINEVSKYIEHHMDYQRP---RLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQCQDD 116 (512) T ss_pred hhHHHHHHHHHHHHHhhHH---HHHHHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCceeccC Confidence 10 11111110000000 001112222111100 0000001111224566777888888888888876432 Q ss_pred cCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC--cEE Q lcl|Aclame:pro 72 TDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT--GML 149 (416) Q Consensus 72 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~--~~~ 149 (416) ++. .. ..+..++.. -........+..+++.+|.+|.++.+++.|.+ .+..++|..+.+..++.. ... T Consensus 117 d~~-----~~-~~l~~~~~~----n~~~~~~~~~~~~~~i~G~ay~~vy~ded~~~-~i~~~~p~~~~~iyd~~~~~~~~ 185 (512) T protein:vir:97 117 DKD-----VL-EAIEAFNDL----NDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNTIERNSI 185 (512) T ss_pred ChH-----HH-HHHHHHHhh----cCHHHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEcccceEEEEcCCCCCceE Confidence 211 11 122223222 24456777888999999999999999988875 577889988888877543 111 Q ss_pred ----EEEEee-CC---e---eE-EechhheeeeccCC--------------------------CCccccccHHHHHHHHH Q lcl|Aclame:pro 150 ----WYQTVL-NG---K---AI-ELYDYEVLHFKGLS--------------------------TDGIHGKSPIGVVREHI 191 (416) Q Consensus 150 ----~~~~~~-~~---~---~~-~~~~~~vih~~~~~--------------------------~~~~~G~s~~~~~~~~i 191 (416) +|.... .+ . .. .+.++.+++++... .+...|.|.++.+...+ T Consensus 186 ~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~gd~e~v~~li 265 (512) T protein:vir:97 186 AGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLI 265 (512) T ss_pred EEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcccceEeecCCCCCCCchhhhHHHH Confidence 121110 00 0 01 22333344432100 01235788888888888 Q ss_pred HHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH-H---h--hcCCceeecCCCceeEeccCChhhHHHHH Q lcl|Aclame:pro 192 GAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK-R---V--NKVENIAIIDYGLEYQSISMPLQEAQFVE 265 (416) Q Consensus 192 ~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~-~---~--~~~~~~~vl~~g~~~~~~~~~~~d~~~~e 265 (416) +....+..-..+.+...+.|-.+++-....+++.....+.... . . .......-.++|.++..+........+.. T Consensus 266 Da~d~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~e~ 345 (512) T protein:vir:97 266 DLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYENRDTGIETEGSVDGGYIYKQYDVQGTEA 345 (512) T ss_pred HHHHHHHHHHHHHHHHhcCceeeeecCccCCchhhhhhhhcccccccccchhhcccccCCCCCcceEEEeecCCHHHHHH Confidence 8877777777777777777777776544444444433332111 0 0 01111112355666766666666666778 Q ss_pred HHHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhccccc Q lcl|Aclame:pro 266 SMKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGH 333 (416) Q Consensus 266 ~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~ 333 (416) ..+...+.|+..-++|..-.+... |+-|.. .......+..+|.-.++.|...++..--.... ..-. T Consensus 346 ~~~~L~~~I~~~s~~p~~~~~~~~-gn~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~~li~~~~~~~~~~~~~-~d~~ 423 (512) T protein:vir:97 346 YKDRLNSDIHMFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDAN-KDFN 423 (512) T ss_pred HHHHHHHHHHHHhCCcccCccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-cccc Confidence 888889999999999875543222 222211 11122233333444444443333321100000 0111 Q ss_pred chhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCccccccccccccccCCcccCCCC Q lcl|Aclame:pro 334 YVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQRLKAGGAMKGGD 411 (416) Q Consensus 334 ~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge 411 (416) .+.+.+..-+..+..+.++.+.++ .|+++.--+.+++++-+.|. .+.+---.. ..+.... ......+...+.++ T Consensus 424 ~i~~~f~~~~p~~~~e~~~~~~kl--~giiS~et~~~~l~~v~d~~~E~eri~~E~~-~~~~~~~-~~~~~~~~~~~~~~ 499 (512) T protein:vir:97 424 TVRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEK-ESIKKAQ-KGIYKDPRDINDDE 499 (512) T ss_pred cceEEeCCCCCcCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHHHHHHHHHHHHH-HHHHHHh-hcccCCCCCCCCCC Confidence 345555666778888889988888 48999988888876533211 000000000 0000000 00000011111111 Q ss_pred ccCCC Q lcl|Aclame:pro 412 NKNEG 416 (416) Q Consensus 412 ~~~~~ 416 (416) +++++ T Consensus 500 ~~~~~ 504 (512) T protein:vir:97 500 QDDDT 504 (512) T ss_pred CCCCc Confidence 11222 No 183 >protein:vir:96240 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1607 # MgeName: 69 # Cross-refs: genbank:acc:YP_239567;genbank:gi:66395299;genbank:GeneID:5132789 Probab=98.46 E-value=5.5e-07 Score=54.89 Aligned_cols=394 Identities=11% Similarity=0.045 Sum_probs=189.9 Q ss_pred Cc---chhhhccccccccccccchhHHHhhhcCccc------cccccccHHHHhccHHHHHHHHHHHHhhccCcceEEee Q lcl|Aclame:pro 1 ML---LERMFEKRSGSSDHEDGFNNILLNMFGGRKT------ASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKR 71 (416) Q Consensus 1 m~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 71 (416) +- +.++..+......+ -...+..++.+... ........+.-+........++..+.-+-+-|+.+... T Consensus 40 ~~~~~i~~~i~~~~~~~~~---r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~ 116 (511) T protein:vir:96 40 QNVNEVSKYIEHHMDYQRP---RLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDD 116 (511) T ss_pred ccHHHHHHHHHHHHHhhHH---HHHHHHHHhcccCccccccCcCcccccCcceeecchHHHHHHHHHhhhccCCceeecC Confidence 11 11111111000000 00112222221110 00000001111224566777888888888888876422 Q ss_pred cCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC--cEE Q lcl|Aclame:pro 72 TDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT--GML 149 (416) Q Consensus 72 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~--~~~ 149 (416) ++ . .. ..+..++.. -........+..+++.+|.+|.++.+++.|.+ .+..++|..+.+..++.. ... T Consensus 117 ~~-~----~~-~~l~~~~~~----n~~~~~~~~~~~~~~i~G~a~~~vy~ded~~~-~i~~~~p~~~~~vydd~~~~~~~ 185 (511) T protein:vir:96 117 DK-D----VL-EAIEAFNDL----NDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNTIERNSI 185 (511) T ss_pred ch-H----HH-HHHHHHHhh----cCHHHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCCCCCceE Confidence 21 1 11 112222222 24556777888999999999999999888865 567788888888776543 211 Q ss_pred ----EEEEee-CC---ee---E-EechhheeeeccCC--------------------------CCccccccHHHHHHHHH Q lcl|Aclame:pro 150 ----WYQTVL-NG---KA---I-ELYDYEVLHFKGLS--------------------------TDGIHGKSPIGVVREHI 191 (416) Q Consensus 150 ----~~~~~~-~~---~~---~-~~~~~~vih~~~~~--------------------------~~~~~G~s~~~~~~~~i 191 (416) +|.... .+ .. + .+.++.++++.... .+...|.|.++.+...+ T Consensus 186 ~~vr~~~~~~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~g~gd~e~v~~li 265 (511) T protein:vir:96 186 AGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLI 265 (511) T ss_pred EEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCCceeeEEecCCCCCCCchhhhHHHH Confidence 111110 00 00 1 12333333321100 01235888888888888 Q ss_pred HHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH----H-hhcCCceeecCCCceeEeccCChhhHHHHHH Q lcl|Aclame:pro 192 GAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK----R-VNKVENIAIIDYGLEYQSISMPLQEAQFVES 266 (416) Q Consensus 192 ~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~----~-~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~ 266 (416) +....+.....+.+...+.|-.+++-....+.++.....+... . ....+...-.+++.++..+........+.+. T Consensus 266 Da~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~~ 345 (511) T protein:vir:96 266 DLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAY 345 (511) T ss_pred HHHHHHHHHHHHHHHHhhCceeeeecCccCCchhhcccccccceecccccccccccccCCCCcceeEEeecCCHHHHHHH Confidence 8777777777777777777777776644444444333222110 0 0111111223445666666655566677788 Q ss_pred HHHHHHHHHHHhccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccc Q lcl|Aclame:pro 267 MKFNKAQISMIYKVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHY 334 (416) Q Consensus 267 ~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~ 334 (416) .+...+.|+..-++|..-.+... ++-|... ......+..+|.-.++.|...+..+--.... ..-.. T Consensus 346 ~~~L~~~I~~~s~~p~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~~~~-~d~~~ 423 (511) T protein:vir:96 346 KDRLNSDIHMFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTWSIDAN-KDFNT 423 (511) T ss_pred HHHHHHHHHHHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc-ccccc Confidence 88899999999999875443222 2222111 1122333444555554555444432111000 01123 Q ss_pred hhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCccccccccccc--cccCCcccCCC Q lcl|Aclame:pro 335 VKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQ--RLKAGGAMKGG 410 (416) Q Consensus 335 ~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~--~~~~~~~~~gg 410 (416) +++.+..-+..|..+.++.+.++ .|+++.-.+.+++++-..|. .+.+---. .+.....+ ....+...+.+ T Consensus 424 i~~~f~~~~p~n~~e~~~~~~kl--~G~iS~et~l~~l~~v~D~~~E~~ri~~E~----~~~~~~~~~~~~~~~~~~~~~ 497 (511) T protein:vir:96 424 VRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDE----KESIKKAQKGIYKDPRDINDD 497 (511) T ss_pred ceEEeCCCCCCCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHHH----HHHHHHHhhccccCCCCCCCC Confidence 55556677788899999998887 68999999988886543221 11000000 00000000 00011111112 Q ss_pred CccCCC Q lcl|Aclame:pro 411 DNKNEG 416 (416) Q Consensus 411 e~~~~~ 416 (416) ++++++ T Consensus 498 ~~~~~~ 503 (511) T protein:vir:96 498 EQDDDT 503 (511) T ss_pred CCCCcc Confidence 222222 No 184 >protein:vir:80959 Length: 499 # NCBI annotation: gp3 # Family: family:all:898 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468389;genbank:gi:157324963;genbank:GeneID:5601394 Probab=98.44 E-value=6.4e-07 Score=54.54 Aligned_cols=388 Identities=11% Similarity=0.055 Sum_probs=185.7 Q ss_pred Ccchhhhccccc---ccccccc--chhHHHhhhcCcccc--------ccccccHHHHhccHHHHHHHHHHHHhhccCcce Q lcl|Aclame:pro 1 MLLERMFEKRSG---SSDHEDG--FNNILLNMFGGRKTA--------SGERVSESNSLVQPDIFACVNVLSDDIAKLPIH 67 (416) Q Consensus 1 m~~~~~f~~~~~---~~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~ 67 (416) |+..+-++.... ...+... .-..+..++.+.... .+.... +.-........+++..|+-+..=|.. T Consensus 16 ~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~-~~~~s~n~~~~iv~~~a~~l~~ep~~ 94 (499) T protein:vir:80 16 MGLLKSLKDVTDHKKVNANDEDYKYIDMWKRLYQGNYAEWHNLNYEHNGNPVN-RRQLSMNLPKVTAKYMSKLLFNEKVK 94 (499) T ss_pred hccccchhhhhcCCCCcCCHHHHHHHHHHHHHhcCCcchhhccccccCCCccc-cceeecchHHHHHHHHHHhhhCCcce Confidence 332221211100 0000000 001112222221100 000111 12233445566777888777776666 Q ss_pred EEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCc Q lcl|Aclame:pro 68 TYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTG 147 (416) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~ 147 (416) +.-.++ .....| .+-...-....-+...+......|.+++.+..+.+|.+ .+..++|..+-+...+.+. T Consensus 95 i~~~d~---------~~~e~l-~~~~~~n~f~~~~~~~~~~a~~~G~~~~~~~~D~~~~~-~i~~v~a~~~~Pi~~d~~~ 163 (499) T protein:vir:80 95 INIDDE---------TAEEFV-LNVLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGNKNV-KVSFATADCMYPLSNDSEN 163 (499) T ss_pred EeeCCH---------HHHHHH-HHHHhhccHHHHHHHHHHHHhhcCcEEEEEEECCCCcE-EEEEEcCCceEEEEecCCC Confidence 543211 111112 11111123455566677778889999999999888865 4567777777764443332 Q ss_pred EE----EEEEeeCCe----------------e-----------------EEechh------------------heeeecc Q lcl|Aclame:pro 148 ML----WYQTVLNGK----------------A-----------------IELYDY------------------EVLHFKG 172 (416) Q Consensus 148 ~~----~~~~~~~~~----------------~-----------------~~~~~~------------------~vih~~~ 172 (416) .. ++.+...+. . ..++.. .+.+++. T Consensus 164 ~~~~~f~~~~~~~~~~y~~lE~h~~~~~~~~~y~I~n~~~~~~~~~~lG~~v~l~~~~~~~~~~~~~~~~~~p~f~~~~~ 243 (499) T protein:vir:80 164 VDECLIANSFHKNNKYYKLLEWNEWKGEKEEVYTVTTELYQSDDPNELGGKVSLKLLFNDIEPVVPLPSLTRPTFIYIKP 243 (499) T ss_pred eEEEEEEEEEeecCeEEEEEEEEEecccceeeEEEEEEEEeccCccccCcccchhhhccCcCCceeecCCCccceEeecC Confidence 21 000000000 0 001100 1334444 Q ss_pred CCC-----CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceee-----ccCCcCCHHHHHHHHHHHHHhhcCCce Q lcl|Aclame:pro 173 LST-----DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGIL-----KVPAFLDEKPKENVRKEWKRVNKVENI 242 (416) Q Consensus 173 ~~~-----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~-----~~~~~~~~e~~~~~~~~~~~~~~~~~~ 242 (416) +-. ....|.|.+.-+...++..........+-++.+. ...++ ......+-+. ...|......-.. T Consensus 244 ~~~N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~~~~-~~i~v~~~~l~~~~~~~g~~----~~~~~~~~~~~~~ 318 (499) T protein:vir:80 244 NIANNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKLGK-KKVLVPSSFVKTAVNLDGST----TQYFDSTDEAFFL 318 (499) T ss_pred CccccccCCCccCCchHhhHHHHHHHHHHHHHHHHHHHHhcc-cceecchhhhhccCCCCCCc----ccCCCcccceeeE Confidence 322 2246999999999999888888777777777643 33333 1111111000 0011110000001 Q ss_pred -eec--CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHH-------------HHHHHH Q lcl|Aclame:pro 243 -AII--DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQS-------------IEYVRN 306 (416) Q Consensus 243 -~vl--~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~-------------~~f~~~ 306 (416) ... +++-.++.++.....-++.+..+...+.|....|+++..+|...++.. ++.+.. ...++. T Consensus 319 ~~~~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~fg~~~~g~~-TAtei~s~~~~l~~~~~~~~~~~~~ 397 (499) T protein:vir:80 319 YQGEQDDNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLK-TATEVVSEKSETYQTKNSHSQLIEQ 397 (499) T ss_pred eeccCCCCcCceeEecCcCChHHHHHHHHHHHHHHHHhcCCChhhcCCCcccch-hHHHHHHHHHHHHHHHHHHHHHHHH Confidence 111 223357777777777788899999999999999999999997665543 222221 122222 Q ss_pred HHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHh-CCCCCCCCCeEee Q lcl|Aclame:pro 307 TLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELL-ERNPIENGDKYIS 385 (416) Q Consensus 307 ~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~-gl~p~~ggd~~~~ 385 (416) +|..+++.|-...+..............+.+++++-+..|.++.++...+++.+|+|+.-.++... |.+. +..++.+- T Consensus 398 ~l~~l~~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~~~~Gi~S~et~l~~~~~~~d-~ea~~el~ 476 (499) T protein:vir:80 398 GIKEMIVSILEVGKLIKAYDGDTVELDTITVDFDDSIAQDEDTTINRYTTAKNQGMIPLKIALQRAWNITE-AEADEWAE 476 (499) T ss_pred HHHHHHHHHHHHHHHhccccCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHhhcCCCCh-HHHHHHHH Confidence 333333333322221111111122345677778888889999999999999999999999887653 4432 11111111 Q ss_pred ccCccccccccccccccCCc-ccCCCCccCC Q lcl|Aclame:pro 386 SLNYVFLDFLEEYQRLKAGG-AMKGGDNKNE 415 (416) Q Consensus 386 ~~n~~~~~~~~~~~~~~~~~-~~~gge~~~~ 415 (416) ...+.+....+. ...|-.+++| T Consensus 477 --------~i~~E~~~~~~~~d~~g~~ge~e 499 (499) T protein:vir:80 477 --------MLAKEKQAEIPNNDMTGIFGEEE 499 (499) T ss_pred --------HHHHHhhcCCCCCCccccCCCCC Confidence 000001111111 1123334444 No 185 >protein:vir:78227 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1849 # MgeName: Bethlehem # Cross-refs: genbank:acc:YP_001491663;genbank:gi:157786487;genbank:GeneID:5625705 Probab=98.40 E-value=8.4e-07 Score=53.89 Aligned_cols=391 Identities=12% Similarity=0.068 Sum_probs=163.6 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--ccccccH---HHHhccHHHHHHHHHHHHhhccCcceEEeecCCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGERVSE---SNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG 75 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 75 (416) =.+.++.......... ...+..++-|-... .+..+.. +.-....+...+|+..+..+--..|.+ .++. T Consensus 6 ~~i~~L~~~~~~~~~r----~~~l~~Yy~G~~~i~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~---~~d~ 78 (480) T protein:vir:78 6 EHVERLQGLLARDLPN----LLEAEAYRNGTRRLKTIGIGAPPELAYLDVQPGWVATYLRTLSDRLDIEGFRI---SEDS 78 (480) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHhccccccccccccchhHhhhhhhcchHHHHHHHHHhhhccCceec---CCCc Confidence 0111111111000000 00111111111100 0001100 111223455667777776654334322 1111 Q ss_pred ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec------CCCcEEEEEeeccceEEEEEcCC--Cc Q lcl|Aclame:pro 76 IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG------SHGYPEALFPLRPDYTNAYVHPT--TG 147 (416) Q Consensus 76 ~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~------~~g~~~~l~~l~p~~v~~~~~~~--~~ 147 (416) .....+.. ++.+ | ........+..+++.+|.||.++.+. ..|.+ .+.+++|..+.+.+++. +. T Consensus 79 ---~~~~~l~~-i~~~-N---~~d~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~g~~-~i~~~~p~~~~~~~D~~~~~~ 149 (480) T protein:vir:78 79 ---EGLEELWN-WWQA-N---DLDEESVLGHDDSLTFGRSYITVSHPDVESGDPAGIP-LIRVESPLYMYAELDPRNTRR 149 (480) T ss_pred ---hhHHHHHH-HHHh-c---CHHHHHHHHHHHHhhcCceEEEEecCccccCCCCCee-EEEEEcccceEEEEcCCCccc Confidence 11122223 3222 2 23467788889999999999998763 34544 46678888888877753 11 Q ss_pred EE----EEEEe------------eCCeeEE---------------------echhheeeeccCC-CCccccccHHHH-HH Q lcl|Aclame:pro 148 ML----WYQTV------------LNGKAIE---------------------LYDYEVLHFKGLS-TDGIHGKSPIGV-VR 188 (416) Q Consensus 148 ~~----~~~~~------------~~~~~~~---------------------~~~~~vih~~~~~-~~~~~G~s~~~~-~~ 188 (416) .. +|... ..+..+. +..=.|++|.+.. ..+.+|.|.+.. +. T Consensus 150 ~~~~i~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~s~i~~~v~ 229 (480) T protein:vir:78 150 VTRAVRLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGRSEISPELR 229 (480) T ss_pred eEEEEEEEEeecCCCceEEEEEEeCCeEEEEEecCCCccccccccccccCCCCCcceEEeecccccCCccCcccchhhHH Confidence 11 11000 0000011 1111345555432 234678776653 34 Q ss_pred HHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeec-CCCceeEeccCChhhHHHHHHH Q lcl|Aclame:pro 189 EHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAII-DYGLEYQSISMPLQEAQFVESM 267 (416) Q Consensus 189 ~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl-~~g~~~~~~~~~~~d~~~~e~~ 267 (416) ..++............+.-.+.|..++.- ....+...+.-...|.. ..+.++.+ +++.++.++....- -.+++.. T Consensus 230 ~l~Da~~~~~s~~~~~~~~~a~p~~~i~G-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 305 (480) T protein:vir:78 230 KVTDAASRTLMNLQSASQILGTPLRVISG-VTTDELTNDGENTTLDI--YYGRILTLASEAAKISEFKAAEL-RNFAEEM 305 (480) T ss_pred HHHHHHHHHHHHHHHHHHhhcchhhhhhc-CCccccccccccchhhh--hhhhhccCCCCCceEEecCccCH-HHHHHHH Confidence 44444333333333334444456555431 11111111111111221 11223344 34567766654322 2366778 Q ss_pred HHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHH----HHHHHHHhh------cCchhcccccchhh Q lcl|Aclame:pro 268 KFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVN----FEQELNVKL------FLDHDQKSGHYVKF 337 (416) Q Consensus 268 ~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~----i~~~l~~~l------~~~~~~~~~~~~~f 337 (416) +..+..|+..-++|+..+|.... +.++.+.. .+....|.-.+.. +...|.+.+ ...........+.+ T Consensus 306 ~~~i~~~~~~~~~p~~~~g~~~~-n~~Sg~Al--k~~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~g~~~~~~~~~i~v 382 (480) T protein:vir:78 306 EVFRKEAASITGLPPQYLSSSSE-NPASAEAI--IATDSRIVKMAERKGRIFGGAWERAMRIAMQIMGREVTEEYTRLET 382 (480) T ss_pred HHHHHHHhcccCCChHHhccccC-cchHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeE Confidence 88888899999999999986432 21222221 1111222222222 222222211 11000111122444 Q ss_pred hhhhhhhccHHHHHHHHHHHHhCC--CcCHHHHHHHhCCCCCCC--CCeEeeccCcccc--------ccccccccccCCc Q lcl|Aclame:pro 338 NIDSELRGDSKTQAEYLKTLHETG--VLNKDEIRELLERNPIEN--GDKYISSLNYVFL--------DFLEEYQRLKAGG 405 (416) Q Consensus 338 ~~~~l~~~d~~~~~~~~~~~~~~g--~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~--------~~~~~~~~~~~~~ 405 (416) .+.+....+..+.++.+.+++.+| +++.--+++.+|+.+.+- .++.--...-.++ +.+........++ T Consensus 383 ~f~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~lg~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (480) T protein:vir:78 383 VWRDPSTPTVAAKADAVSKLYANGQGPIPKEQARIDLGYTATQREQMRDWDKQETEDMIDTLYSTTKAQADATPKPTVTE 462 (480) T ss_pred EecCCCCCCHHHHHHHHHHHHHhccccCCHHHHHhcCCCCHhHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCCCC Confidence 444555678888888888888765 678877888888876421 1110000000000 0111111111111 Q ss_pred ccCCCCccCCC Q lcl|Aclame:pro 406 AMKGGDNKNEG 416 (416) Q Consensus 406 ~~~gge~~~~~ 416 (416) . .++.++.+ T Consensus 463 ~--~~~~~~~~ 471 (480) T protein:vir:78 463 T--KTETQTSP 471 (480) T ss_pred C--CCcccccc Confidence 1 12222222 No 186 >protein:vir:2732 Length: 501 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:58 # MgeName: O1205 # Cross-refs: genbank:acc:NP_695105;genbank:gi:23455874;genbank:GeneID:955614 Probab=98.39 E-value=8.7e-07 Score=53.82 Aligned_cols=400 Identities=11% Similarity=0.033 Sum_probs=190.5 Q ss_pred Cc----chhhhccccccccccccchhHHHhhhcCcccc--cccc----ccHHHHhccHHHHHHHHHHHHhhccCcceEEe Q lcl|Aclame:pro 1 ML----LERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGER----VSESNSLVQPDIFACVNVLSDDIAKLPIHTYK 70 (416) Q Consensus 1 m~----~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~ 70 (416) +- +.++..+......+. ...+..++.+.... .... -....-+..+....+|+..+.-+-.-|+.+.. T Consensus 38 ~~~~~~l~~~i~~~~~~~~~r---~~~l~~yY~g~~~~i~~~~~~~~~~~~~~ki~~n~~k~Ivd~~~~yl~g~p~~~~~ 114 (501) T protein:vir:27 38 VNNWELLKNFINHHKLRQAPR---IQELLDYARGENHDVLQFGRRKDREMADKRAVHNYGRMISKFKTGYLAGNPIRVEY 114 (501) T ss_pred cccHHHHHHHHHHHHHHHHHH---HHHHHHHhcCCCccccccCccCccccccceeccchHHHHHHHHhhhhcccCeeEec Confidence 11 222221111110000 01111222221100 0000 00111234567788899999888888887654 Q ss_pred ecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC--cE Q lcl|Aclame:pro 71 RTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT--GM 148 (416) Q Consensus 71 ~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~--~~ 148 (416) .+++.. ..+...| .+-+..-........+..+++.+|.+|.++.+++.|.+ .+..++|..+.+..++.. .. T Consensus 115 ~d~~~~-----~~~~~~l-~~~~~~n~~~~~~~~~~~~~~~~G~a~~~vy~ded~~~-~i~~~~p~~~~~v~d~~~~~~~ 187 (501) T protein:vir:27 115 DDNDNN-----SQNDDTI-KRIGRINDIDSHNRTLIRDLSQTGRAYEVIYRNEYDET-RIKRLNPLETFVIYDNSLEDNS 187 (501) T ss_pred CCccch-----HHHHHHH-HHHHHhcChhHHHHHHHHHHhhCCeEEEEEEeCCCCce-EEEEEccceeEEEecCCCCCce Confidence 332211 1111111 11111224557888899999999999999999988876 466788888888776532 12 Q ss_pred E----EEEEeeCCee---E-Eechhheeeecc----------CC----------CCccccccHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 149 L----WYQTVLNGKA---I-ELYDYEVLHFKG----------LS----------TDGIHGKSPIGVVREHIGAQAAATKY 200 (416) Q Consensus 149 ~----~~~~~~~~~~---~-~~~~~~vih~~~----------~~----------~~~~~G~s~~~~~~~~i~~~~~~~~~ 200 (416) . +|........ + .+.++.++++.. ++ .+...|.|.++.+...++........ T Consensus 188 ~~~ir~~~~~~~~~~~~~~~vyt~~~v~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~d~~~S~ 267 (501) T protein:vir:27 188 IAAVRYYNRGTLQNAKDVVEIYTNEHIYTLDASDDFNEISVTTHAFGTVPITEFLNNVDGIGDYETELYLIDLYDSAESD 267 (501) T ss_pred EEEEEEEEeeecCCcEEEEEEEeCCeEEEEEeCCceeeccccccCCCcccEEEecCCCCCCCchhhhHHHHHHHHHHHHH Confidence 1 1111111110 1 111222211110 00 12336888888888888887777777 Q ss_pred HHHHHhccCCcceeeccCC-cCCHHHHHHHHHH-HHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 201 NAKLYKNEATPRGILKVPA-FLDEKPKENVRKE-WKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIY 278 (416) Q Consensus 201 ~~~~~~n~~~~~~v~~~~~-~~~~e~~~~~~~~-~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~ 278 (416) ..+.+.....|-.+++... ....+....++.. .......+.......+.++..+.....+..+.+..+...+.|+.+- T Consensus 268 ~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s 347 (501) T protein:vir:27 268 TANHMSDMADAILAIYGDLALPKGMQASDMKRTRLMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAYKTRLNRDIHIFT 347 (501) T ss_pred HHHHHHHhcCceeeeecCccCCcccchhhhhhcCceeecccccccCCCCCcceeeeeccCCHHHHHHHHHHHHHHHHHHh Confidence 7777777777766665432 2223333333321 1111222223334556666666666666667778888899999999 Q ss_pred ccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhcc Q lcl|Aclame:pro 279 KVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGD 346 (416) Q Consensus 279 gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d 346 (416) ++|..-.+.. .++-|... ......+...|.-+++.+...++..--.. ......+.+.+...+..+ T Consensus 348 ~~p~~~~~~~-~~n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~--~~d~~~i~v~f~~~~p~n 424 (501) T protein:vir:27 348 NIPDMSDTNF-SGNTSGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFK--DFDESLLKITFTPNLPKS 424 (501) T ss_pred CCcccCcccc-ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--ccccccceEEeCCCCCcC Confidence 9986444322 22222111 11223344444444444444443221100 111123555567778889 Q ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEee------ccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 347 SKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYIS------SLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 347 ~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~------~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ..+.++.+.++ .|+++..-+.+++++-..|. .+.+-- +.... -+..+............++|.+++- T Consensus 425 ~~e~ad~~~kl--~g~iS~et~l~~l~~v~D~~~E~eri~~E~~e~~~~~~~-~~~~~~~~~~~d~~~~~~~d~~e~~ 499 (501) T protein:vir:27 425 LNEQVSILTGL--GGQVSQETALSLSGLVESPNEELDKINKEVSEIDFKGYS-NDFNEHVGKYTDEVKETHTDDFERA 499 (501) T ss_pred HHHHHHHHHHH--hccCcHHHHHHhCCCCCCHHHHHHHHHHHHHhhhHhhhc-CccccccccccCCCCCCcccccccc Confidence 99999998887 58899888888875533211 111000 00000 0000000000000011112222212 No 187 >protein:vir:80680 Length: 441 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1884 # MgeName: PA6 # Cross-refs: genbank:acc:YP_001285579;genbank:gi:148727085;genbank:GeneID:5247051 Probab=98.38 E-value=5.7e-07 Score=54.81 Aligned_cols=375 Identities=14% Similarity=0.085 Sum_probs=166.6 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--cccccc---HHHHhccHHHHHHHHHHHHhhccCcceEEeecCCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGERVS---ESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG 75 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 75 (416) -.+.++.......... ...+..++-|.... .+.... ++.-....+..-+|+..+..+--..| ...++ T Consensus 7 ~~i~~l~~~~~~~~~r----~~~l~~Yy~G~~~i~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~g~---~~~d~- 78 (441) T protein:vir:80 7 ALIEGMYDRIQRLSSW----HCCIEGYYEGSNRVRDLGVAIPPELQRVQTVVSWPGIAVDALEERLDWLGW---TNGDG- 78 (441) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHhcCCcchhcCcccchhhhhhhhhcchHHHHHHHHHhhhccccc---cCCCh- Confidence 2223332221111100 11111222111110 000110 11112334555666666655422222 11111 Q ss_pred ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEE-----E Q lcl|Aclame:pro 76 IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGML-----W 150 (416) Q Consensus 76 ~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~-----~ 150 (416) ..+..+... | +.......+..+++.+|.||.++.+++.|.+ .+.+++|..+.+.+++..+.. . T Consensus 79 -------~~l~~i~~~-n---~~~~~~~~~~~~~~~~G~a~~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~~~~~~~ 146 (441) T protein:vir:80 79 -------YGLDGVYAA-N---RLATASCDVHLDALIFGLSFVAIIPHGDGTV-SVRPQSPKNCTGKFSADGSRLDAGLVV 146 (441) T ss_pred -------HHHHHHHHh-c---CHHHHHHHHHHHHhhcCeeEEEEEeCCCCce-EEEEEccceEEEEEeCCCCceeEEEEE Confidence 112223222 2 3567888899999999999999999999987 578889999888777543211 0 Q ss_pred EEEee----------CCeeEE------------------echhheeeeccCC-CCccccccHHHH-HHHHHHHHHHHHHH Q lcl|Aclame:pro 151 YQTVL----------NGKAIE------------------LYDYEVLHFKGLS-TDGIHGKSPIGV-VREHIGAQAAATKY 200 (416) Q Consensus 151 ~~~~~----------~~~~~~------------------~~~~~vih~~~~~-~~~~~G~s~~~~-~~~~i~~~~~~~~~ 200 (416) |.... .+..+. +..=.|+|+.+.. ....+|.|.+.. +...++........ T Consensus 147 ~~~~~~~~~~~~vy~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~l~~~v~~liDa~~~~~s~ 226 (441) T protein:vir:80 147 QQTCDPEVVEAELLLPDVIVQVERRGSREWVEVDRIPNVLGAVPLVPIVNRRRTSRIDGRSEITRSIRAYTDEAVRTLLG 226 (441) T ss_pred EEEecCceEEEEEEecCeEEEEEEcCCcceeeccccccCCCceeEEEeeccccCCccCCcccchhhHHHHHHHHHHHHHH Confidence 10000 000000 1111355665432 234578776543 33444443333333 Q ss_pred HHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCC-----ceeEeccCChhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 201 NAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYG-----LEYQSISMPLQEAQFVESMKFNKAQIS 275 (416) Q Consensus 201 ~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g-----~~~~~~~~~~~d~~~~e~~~~~~~~Ia 275 (416) ......-.+.|-.++.- ...++...+..+. ..++++.++.+ .++.++..+. -..+.+..+.....|+ T Consensus 227 ~~~~~~~~~~~~~~i~G-~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~i~~~~ 298 (441) T protein:vir:80 227 QSVNRDFYAYPQRWVTG-VSADEFSQPGWVL------SMASVWAVDKDDDGDTPNVGSFPVNS-PTPYSDQMRLLAQLTA 298 (441) T ss_pred HHHHHHhhcCceeeeec-CCccccccchhhh------cccccccCCCCCCCCcceeEecCccc-hHHHHHHHHHHHHHHh Confidence 33444445556555542 1222221111111 12334444322 3444433221 2246777888899999 Q ss_pred HHhccchhhcccccCCCcccHHHH-------------HHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhh Q lcl|Aclame:pro 276 MIYKVPLHKLNELDKATFSNIEHQ-------------SIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSE 342 (416) Q Consensus 276 ~~~gvp~~~lg~~~~~~~s~~e~~-------------~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l 342 (416) ..-++|+..+|...... ++.++. ....+..+|.-.++.+...++...-. ......+++.+... T Consensus 299 ~~~~~p~~~~g~~~~~~-~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~~~~~~~---~~~~~~i~~~f~~~ 374 (441) T protein:vir:80 299 GEAAVPERYFGFITSNP-PSGEALAAEESRLVKRAERRQTSFGQGWLSVGFLAAKALDSRVDE---ADFFGDVGLRWRDA 374 (441) T ss_pred cccCCCHHHhccCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---cccceeeeEEeCCC Confidence 99999999997654321 111111 11122222222222222222211100 01123455556677 Q ss_pred hhccHHHHHHHHHHHHhCCCcC--HHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 343 LRGDSKTQAEYLKTLHETGVLN--KDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 343 ~~~d~~~~~~~~~~~~~~g~~t--~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) ...+..+.++++.+++.+|++. ..-+++.+|+.+.+- .++. -+.....++..+-......+++.= T Consensus 375 ~~~~~~e~ad~~~kl~~~g~~~~s~~~~~~~l~~~~~e~-~~~~-------~e~~e~~~~~~~~~~~~~~~~~~~ 441 (441) T protein:vir:80 375 STPTRAATADAVTKLVGAGILPADSRTVLEMLGLDDVQV-EAVM-------RHRAESSDPLAVLAGAISRQTNEV 441 (441) T ss_pred CCcCHHHHHHHHHHHHhcCcccccHHHHHHhCCCCHHHH-HHHH-------HHHHHHHHHHHHHhhhhhcccccC Confidence 7889999999999999999764 445777787764321 0000 000000000000000000111111 No 188 >protein:vir:79043 Length: 479 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110721;genbank:gi:134287338;genbank:GeneID:4955217 Probab=98.35 E-value=1.1e-06 Score=53.22 Aligned_cols=379 Identities=9% Similarity=-0.014 Sum_probs=187.1 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc---------cccccc----HHHHhccHHHHHHHHHHHHhhccCcce Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA---------SGERVS----ESNSLVQPDIFACVNVLSDDIAKLPIH 67 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~----~~~a~~~~~v~~~i~~ia~~ia~~~~~ 67 (416) .++.++++..-... ...-...+..++.+.... ...... ...-+.++....+|+..+.-+..-|+. T Consensus 22 ~~~~~~i~~~~~~~--~~~~~~~~~~yy~g~~~i~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~Ivd~~~~~l~g~p~~ 99 (479) T protein:vir:79 22 INLVKVIEHYILKH--RPEKYKQGEEYYYGNTDVNNKRRYYLLDGAKVDDFTKVNNKAINNYHKLLVDQKVGYSVGNPIV 99 (479) T ss_pred hHHHHHHHHHHhhh--hHHHHHHHHHHhccCCcccccccccccccccccccccCcceeecchHHHHHHHHHhhhhcCCce Confidence 22222222110000 000011122222221100 000000 001123556677888888888888877 Q ss_pred EEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCc Q lcl|Aclame:pro 68 TYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTG 147 (416) Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~ 147 (416) +...++. . ...+..+.. | ........+....+.+|.+|.++..+..|++ .+..++|..+.+..++... T Consensus 100 ~~~~~~~-----~-~~~~~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~d~~~~ 167 (479) T protein:vir:79 100 FNADDDN-----L-TKLLNDLLG--E---EFDDTITELYLNASNKGVEWLHPYINRKGEF-KYVIIPAEEAIPIWDSKRQ 167 (479) T ss_pred eccCCHH-----H-HHHHHHHHh--c---CHHHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEccceeEEEEeCCCC Confidence 6322111 1 112333322 2 3456667788899999999999998888876 4777888888887765321 Q ss_pred --EE----EEEEe-eCCeeE----EechhheeeeccC------------------------------------C----CC Q lcl|Aclame:pro 148 --ML----WYQTV-LNGKAI----ELYDYEVLHFKGL------------------------------------S----TD 176 (416) Q Consensus 148 --~~----~~~~~-~~~~~~----~~~~~~vih~~~~------------------------------------~----~~ 176 (416) .. +|... ..+... .+.++.+.+++.- + .+ T Consensus 168 ~~~~~~ir~y~~~~~~~~~~~~~e~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~n 247 (479) T protein:vir:79 168 RELVAFIRFYYIEDIDGNKIKRVEYYTENDITYFIERGNSFIQEFLYDEYGKMTDIQEGHFRINNKEQGWGKVPFIPFKN 247 (479) T ss_pred CceEEEEEEEEEeecCCceEEEEEEEeCCcEEEEEecCCcccccccccccccccccccccccccccccCCCcccEEEecC Confidence 11 12111 111110 1122222222110 0 01 Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC-cCCHHHHHHHHHHHHHhhcCCceeecCCCceeEecc Q lcl|Aclame:pro 177 GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA-FLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSIS 255 (416) Q Consensus 177 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~ 255 (416) ...|.|.+..+...++....+.....+.+...+.|-.+++.-. ...++... ....++++.++++.+++.+. T Consensus 248 n~~g~sd~~~v~~liDa~d~~~S~~~~~~~~~~~~~~v~~g~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~~l~ 319 (479) T protein:vir:79 248 NEKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGTSLQEFID--------NIRYYKSIKVDGGGGVDKLE 319 (479) T ss_pred CCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCccccccchh--------hhhhccceecCCCCcceEEe Confidence 2357788888888887777666666667777777777765422 22222111 12234566667666666666 Q ss_pred CChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 256 MPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKL 323 (416) Q Consensus 256 ~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l 323 (416) .......+.+..+...+.|+.+-++|..-.+.. |+-|.. .......+...+.-+++.+...++..- T Consensus 320 ~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~--gn~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~ 397 (479) T protein:vir:79 320 INIPVEAKKELLDRLEKNIIIFGQGVNPESQNT--GDKSGVALKFLYSLLDLKCSKTEKKFKKAIRELLWFVCEYLKISG 397 (479) T ss_pred ccCCHHHHHHHHHHHHHHHHHHhCccccccccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC Confidence 555666777888888999999999886544322 222211 112233344445555555444443321 Q ss_pred cCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccccc--ccccccc Q lcl|Aclame:pro 324 FLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDF--LEEYQRL 401 (416) Q Consensus 324 ~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~--~~~~~~~ 401 (416) ... .....+.+.+..-+..|.++.++.+.++ .|+++.-.+.++++.-+.+. .+ +..+.. ....+.. T Consensus 398 ~~~---~~~~~i~i~f~~~~p~~~~~~a~~~~kl--~g~iS~et~l~~l~~v~d~~-~E------~~ri~~E~~~~~~~~ 465 (479) T protein:vir:79 398 NKS---YDYKTVQITFNHSMIINEAEKIDMAAKS--TGIVSDETIVSNHPWVEDVN-DE------LERLKKQEDTQKEYD 465 (479) T ss_pred CCc---cccccceEEeCCCCCcCHHHHHHHHHHH--hccCcHHHHHHhCCCCCCHH-HH------HHHHHHHHHHHHHHH Confidence 111 1123455556667778899999998887 58999988888876422111 00 011110 0000001 Q ss_pred cCCcccCCCCccCCC Q lcl|Aclame:pro 402 KAGGAMKGGDNKNEG 416 (416) Q Consensus 402 ~~~~~~~gge~~~~~ 416 (416) +. -...++...+|+ T Consensus 466 ~~-~~~~~~~~~~e~ 479 (479) T protein:vir:79 466 DL-IPNNQDGVIDET 479 (479) T ss_pred hc-cCcccCCCcCcC Confidence 10 111222233333 No 189 >protein:vir:3609 Length: 452 # NCBI annotation: ORF32 # Family: family:all:125 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112695;genbank:gi:13786563;genbank:GeneID:921063 Probab=98.31 E-value=1.4e-06 Score=52.67 Aligned_cols=382 Identities=13% Similarity=0.050 Sum_probs=180.0 Q ss_pred Cc------------chhhhccccccccccccchhHHHhhhcCcccc---c-cccccHHHHhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 ML------------LERMFEKRSGSSDHEDGFNNILLNMFGGRKTA---S-GERVSESNSLVQPDIFACVNVLSDDIAKL 64 (416) Q Consensus 1 m~------------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~a~~~~~v~~~i~~ia~~ia~~ 64 (416) || +.++.++....-.. ...+..++-+.... . ........-+..+.....|+..+..+-.- T Consensus 8 ~~~~~~~~~~~~~~i~~~i~~~~~~~~r----~~~~~~Yy~g~~~i~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~ 83 (452) T protein:vir:36 8 LMTFSKDEPITVEVVTKFMEKHKLEVAR----YEYLKNMYLGIMAIDDEPAKDSWKPDNRLAVNFTKYIVDTFTGYFNGI 83 (452) T ss_pred eEEcCCccCCCHHHHHHHHHHHHHHHHH----HHHHHHHhccccccccCccccccCccceeecchHHHHHHHHhhhhccc Confidence 11 11111111100000 00111111111000 0 00000011123456677788888888777 Q ss_pred cceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcC Q lcl|Aclame:pro 65 PIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHP 144 (416) Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~ 144 (416) |+.+...+++ .. ..+..++.. -........+..+.+.+|.+|.++..++.|.+ .+..++|..+.+..++ T Consensus 84 ~~~~~~~d~~-----~~-~~l~~~~~~----n~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~-~i~~~~p~~~~~v~d~ 152 (452) T protein:vir:36 84 PVKKSHSDKE-----IL-TKLQEFDNL----NDMEDEESELAKMACIYGRAFEFLYQDEDTQT-NVVYNSPENMFMVYDD 152 (452) T ss_pred CceeecCChh-----HH-HHHHHHHhh----cChhHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEEcC Confidence 7765432211 11 112222222 23456777888999999999999999888876 4677888888887765 Q ss_pred CCc--EEE--EEEe-eCCe-eE-EechhheeeeccC-----------------C----CCccccccHHHHHHHHHHHHHH Q lcl|Aclame:pro 145 TTG--MLW--YQTV-LNGK-AI-ELYDYEVLHFKGL-----------------S----TDGIHGKSPIGVVREHIGAQAA 196 (416) Q Consensus 145 ~~~--~~~--~~~~-~~~~-~~-~~~~~~vih~~~~-----------------~----~~~~~G~s~~~~~~~~i~~~~~ 196 (416) ... ..+ +.+. ..+. .+ .+.++.++++... + .+...|.|.+..+...++.... T Consensus 153 ~~~~~~~~~i~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~iPvv~~~n~~~g~sd~e~v~~liDa~d~ 232 (452) T protein:vir:36 153 TVKQEPLFAVRYGVDEDKKLQGEVYTLLETIKISGENDEISFGEGTYNPYPDLPVVEFYFNEERMSIFESVISLVNAFNK 232 (452) T ss_pred CCCCceEEEEEEEEecCceEEEEEEecCeEEEEEEcCCceEEecceeccCCcccEEEecCCCCCCcchHHHHHHHHHHHH Confidence 432 211 1111 1111 11 1122222221100 0 1123577888777777777777 Q ss_pred HHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCC-----CceeEeccCChhhHHHHHHHHHHH Q lcl|Aclame:pro 197 ATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDY-----GLEYQSISMPLQEAQFVESMKFNK 271 (416) Q Consensus 197 ~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~-----g~~~~~~~~~~~d~~~~e~~~~~~ 271 (416) ......+.+...+.|-.+++- ...+++....++. .+++.++. +.++..+........+....+... T Consensus 233 ~~s~~~~~~~~~~~p~~~~~g-~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 303 (452) T protein:vir:36 233 AISEKANDVDYFSDQYLTFLG-AAVEEEDLKNIRS--------NRVINYYADGEGKNVDVKFLEKPDSDSQTENLLDRLT 303 (452) T ss_pred HHHHHHHHHHHhcCceeEeec-CCcCchhhhhhhh--------cceEEecCCCCccCCcceeEeecCCHHHHHHHHHHHH Confidence 766677777777777666653 3334433333221 12333221 223444444445566677788889 Q ss_pred HHHHHHhccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhh Q lcl|Aclame:pro 272 AQISMIYKVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNI 339 (416) Q Consensus 272 ~~Ia~~~gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~ 339 (416) +.|+..-++|..-.+.. |+-|... ......+..++..+++.|...++.+- .. .....+.+.+ T Consensus 304 ~~I~~~s~~p~~~~~~~--gn~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~-~~---~~~~~i~i~f 377 (452) T protein:vir:36 304 KLIFQTTMVANISDESF--GSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLFCELSTNVS-NK---DSWKDIEYTF 377 (452) T ss_pred HHHHHHhCccccCcccc--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-Cc---cccccceEEe Confidence 99999999985333222 2221111 11223344445555555444443221 11 1112344445 Q ss_pred hhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 340 DSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 340 ~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) ..-+..|..+.++.+.++ .|+++.--+.++++.-..|. .+.+--- .-.......+.+....+.....+++++| T Consensus 378 ~~~~p~d~~~~a~~~~k~--~g~iS~et~~~~~~~~~d~~~E~~ri~~E-~~~~~~~~~~~~~~~~~~~~~~~~~~~e 452 (452) T protein:vir:36 378 TRNEPKDIKEQAETANIL--MGITSQETALSVISVIPDVQAEMEKIKKE-EASTAIFDKDKQPSEKGTDTVVSETNEE 452 (452) T ss_pred CCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHH-HHHHHHHHhhccCCCCcccccCccccCC Confidence 566788899999998887 68899888888886543221 1110000 0000000000111122222333444444 No 190 >protein:vir:78805 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1858 # MgeName: 80alpha # Cross-refs: genbank:acc:YP_001285356;genbank:gi:148717884;genbank:GeneID:5246936 Probab=98.30 E-value=1.5e-06 Score=52.49 Aligned_cols=391 Identities=11% Similarity=0.034 Sum_probs=182.9 Q ss_pred Ccch---hhhccccccccccccchhHHHhhhcCcccc------ccccccHHHHhccHHHHHHHHHHHHhhccCcceEEee Q lcl|Aclame:pro 1 MLLE---RMFEKRSGSSDHEDGFNNILLNMFGGRKTA------SGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKR 71 (416) Q Consensus 1 m~~~---~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 71 (416) +... ++.++...... .....+..++.+.... .......+.-+........|+..+.-+-+-|+.+... T Consensus 40 ~~~~~i~~~i~~~~~~~~---~r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~ 116 (511) T protein:vir:78 40 QNVNEVSKYIEHHMDYQR---PRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDD 116 (511) T ss_pred cCHHHHHHHHHHHHHhhh---HHHHHHHHHhhccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCceeecC Confidence 1111 11111000000 0001122222211100 0000000111234566777888888887888775322 Q ss_pred cCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC--cEE Q lcl|Aclame:pro 72 TDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT--GML 149 (416) Q Consensus 72 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~--~~~ 149 (416) + +. .. ..+..++.. -....+...+..+++.+|.+|.++.++++|.+ .+..++|..+.+..++.. ... T Consensus 117 d-~~----~~-~~l~~~~~~----n~~~~~~~~~~~~~~~~G~a~~~vy~d~dg~~-~i~~~~p~~~~~v~dd~~~~~~~ 185 (511) T protein:vir:78 117 D-KD----VL-EAIEAFNDL----NDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFIIYDNTVERNSI 185 (511) T ss_pred c-hH----HH-HHHHHHHhh----cChhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEcccceEEEEcCCCCCceE Confidence 1 11 11 122223222 23446777788899999999999999988875 567788888888777543 221 Q ss_pred ----EEEEee-CC---e---eE-EechhheeeeccCC--------------------------CCccccccHHHHHHHHH Q lcl|Aclame:pro 150 ----WYQTVL-NG---K---AI-ELYDYEVLHFKGLS--------------------------TDGIHGKSPIGVVREHI 191 (416) Q Consensus 150 ----~~~~~~-~~---~---~~-~~~~~~vih~~~~~--------------------------~~~~~G~s~~~~~~~~i 191 (416) +|.... .+ . .+ .+.++.++++.... .+...|.|.++.+...+ T Consensus 186 ~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~gd~e~v~~li 265 (511) T protein:vir:78 186 AGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKGDYEKVITLI 265 (511) T ss_pred EEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCCchhhhHHHH Confidence 121110 00 0 01 22334444432110 01235788888888888 Q ss_pred HHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH-Hhhc----CCceeecCCCceeEeccCChhhHHHHHH Q lcl|Aclame:pro 192 GAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK-RVNK----VENIAIIDYGLEYQSISMPLQEAQFVES 266 (416) Q Consensus 192 ~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~-~~~~----~~~~~vl~~g~~~~~~~~~~~d~~~~e~ 266 (416) +....+.....+.+...+.|-.+++-....+.+..+..++... .... .....-..++.++..++.......+.+. T Consensus 266 Da~~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~~ 345 (511) T protein:vir:78 266 DLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYVDAEGRETEGSVDGGYIYKQYDVQGTEAY 345 (511) T ss_pred HHHHHHHHHHHHHHHHhhcchhheecCccCCchhhcccccccceeccccceeccccccCCCCcceeEEeecCCHHHHHHH Confidence 7777666666666666667766666544444444333322111 0000 0001112334445445555555666778 Q ss_pred HHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccc Q lcl|Aclame:pro 267 MKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHY 334 (416) Q Consensus 267 ~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~ 334 (416) .+...+.|+..-++|..-.+... ++-|.. .......+...|.-.++.|...+...--... ...-.. T Consensus 346 ~~~L~~~I~~~s~~P~~~~~~~~-~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~-~~~~~~ 423 (511) T protein:vir:78 346 KDRLNSDIHMFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDA-NKDFNT 423 (511) T ss_pred HHHHHHHHHHHhCCccccccccc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-cccccc Confidence 88889999999999875443322 222111 1112233344444444444444432211000 011123 Q ss_pred hhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccc--cccc--cc---cccCCccc Q lcl|Aclame:pro 335 VKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLD--FLEE--YQ---RLKAGGAM 407 (416) Q Consensus 335 ~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~--~~~~--~~---~~~~~~~~ 407 (416) +++.+..-+..+..+.++.+.++. |+++.--+.+++++-+.|. +++ ..+. .... .+ ....+... T Consensus 424 i~~~f~~~~p~n~~e~~d~~~kl~--G~iS~et~l~~l~~v~d~~-~El------~ri~~E~~~~~~~~~~~~~~~~~~~ 494 (511) T protein:vir:78 424 VRYVYNRNLPKSLIEELKAYIDSG--GKISQTTLMSLFSFFQDPE-LEV------KKIEEDEKESIKKAQKGIYKDPRDI 494 (511) T ss_pred ceEEeCCCCCcCHHHHHHHHHHHh--ccCChHHHHHhCCCCCCHH-HHH------HHHHHHHHHHHHHHhhccccCCCCC Confidence 555566777888999999999884 8899888888775432211 000 0000 0000 00 00001111 Q ss_pred CCCCccCCC Q lcl|Aclame:pro 408 KGGDNKNEG 416 (416) Q Consensus 408 ~gge~~~~~ 416 (416) +.+++++++ T Consensus 495 ~~~~~~~~~ 503 (511) T protein:vir:78 495 NDDEQDDDT 503 (511) T ss_pred CCCCCCCCc Confidence 111222222 No 191 >protein:vir:96366 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1613 # MgeName: 53 # Cross-refs: genbank:acc:YP_239644;genbank:gi:66395376;genbank:GeneID:5132842 Probab=98.30 E-value=1.5e-06 Score=52.49 Aligned_cols=391 Identities=11% Similarity=0.034 Sum_probs=182.9 Q ss_pred Ccch---hhhccccccccccccchhHHHhhhcCcccc------ccccccHHHHhccHHHHHHHHHHHHhhccCcceEEee Q lcl|Aclame:pro 1 MLLE---RMFEKRSGSSDHEDGFNNILLNMFGGRKTA------SGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKR 71 (416) Q Consensus 1 m~~~---~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 71 (416) +... ++.++...... .....+..++.+.... .......+.-+........|+..+.-+-+-|+.+... T Consensus 40 ~~~~~i~~~i~~~~~~~~---~r~~~l~~Yy~g~~~il~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~ 116 (511) T protein:vir:96 40 QNVNEVSKYIEHHMDYQR---PRLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDD 116 (511) T ss_pred cCHHHHHHHHHHHHHhhh---HHHHHHHHHhhccCccccccCcccccccCcceeecchHHHHHHHHhhhhcccCceeecC Confidence 1111 11111000000 0001122222211100 0000000111234566777888888887888775322 Q ss_pred cCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC--cEE Q lcl|Aclame:pro 72 TDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT--GML 149 (416) Q Consensus 72 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~--~~~ 149 (416) + +. .. ..+..++.. -....+...+..+++.+|.+|.++.++++|.+ .+..++|..+.+..++.. ... T Consensus 117 d-~~----~~-~~l~~~~~~----n~~~~~~~~~~~~~~~~G~a~~~vy~d~dg~~-~i~~~~p~~~~~v~dd~~~~~~~ 185 (511) T protein:vir:96 117 D-KD----VL-EAIEAFNDL----NDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFIIYDNTVERNSI 185 (511) T ss_pred c-hH----HH-HHHHHHHhh----cChhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEcccceEEEEcCCCCCceE Confidence 1 11 11 122223222 23446777788899999999999999988875 567788888888777543 221 Q ss_pred ----EEEEee-CC---e---eE-EechhheeeeccCC--------------------------CCccccccHHHHHHHHH Q lcl|Aclame:pro 150 ----WYQTVL-NG---K---AI-ELYDYEVLHFKGLS--------------------------TDGIHGKSPIGVVREHI 191 (416) Q Consensus 150 ----~~~~~~-~~---~---~~-~~~~~~vih~~~~~--------------------------~~~~~G~s~~~~~~~~i 191 (416) +|.... .+ . .+ .+.++.++++.... .+...|.|.++.+...+ T Consensus 186 ~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~gd~e~v~~li 265 (511) T protein:vir:96 186 AGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKGDYEKVITLI 265 (511) T ss_pred EEEEEEEeeeccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCCchhhhHHHH Confidence 121110 00 0 01 22334444432110 01235788888888888 Q ss_pred HHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHH-Hhhc----CCceeecCCCceeEeccCChhhHHHHHH Q lcl|Aclame:pro 192 GAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWK-RVNK----VENIAIIDYGLEYQSISMPLQEAQFVES 266 (416) Q Consensus 192 ~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~-~~~~----~~~~~vl~~g~~~~~~~~~~~d~~~~e~ 266 (416) +....+.....+.+...+.|-.+++-....+.+..+..++... .... .....-..++.++..++.......+.+. T Consensus 266 Da~~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~~ 345 (511) T protein:vir:96 266 DLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYVDAEGRETEGSVDGGYIYKQYDVQGTEAY 345 (511) T ss_pred HHHHHHHHHHHHHHHHhhcchhheecCccCCchhhcccccccceeccccceeccccccCCCCcceeEEeecCCHHHHHHH Confidence 7777666666666666667766666544444444333322111 0000 0001112334445445555555666778 Q ss_pred HHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccc Q lcl|Aclame:pro 267 MKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHY 334 (416) Q Consensus 267 ~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~ 334 (416) .+...+.|+..-++|..-.+... ++-|.. .......+...|.-.++.|...+...--... ...-.. T Consensus 346 ~~~L~~~I~~~s~~P~~~~~~~~-~n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~-~~~~~~ 423 (511) T protein:vir:96 346 KDRLNSDIHMFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDA-NKDFNT 423 (511) T ss_pred HHHHHHHHHHHhCCccccccccc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-cccccc Confidence 88889999999999875443322 222111 1112233344444444444444432211000 011123 Q ss_pred hhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccc--cccc--cc---cccCCccc Q lcl|Aclame:pro 335 VKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLD--FLEE--YQ---RLKAGGAM 407 (416) Q Consensus 335 ~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~--~~~~--~~---~~~~~~~~ 407 (416) +++.+..-+..+..+.++.+.++. |+++.--+.+++++-+.|. +++ ..+. .... .+ ....+... T Consensus 424 i~~~f~~~~p~n~~e~~d~~~kl~--G~iS~et~l~~l~~v~d~~-~El------~ri~~E~~~~~~~~~~~~~~~~~~~ 494 (511) T protein:vir:96 424 VRYVYNRNLPKSLIEELKAYIDSG--GKISQTTLMSLFSFFQDPE-LEV------KKIEEDEKESIKKAQKGIYKDPRDI 494 (511) T ss_pred ceEEeCCCCCcCHHHHHHHHHHHh--ccCChHHHHHhCCCCCCHH-HHH------HHHHHHHHHHHHHHhhccccCCCCC Confidence 555566777888999999999884 8899888888775432211 000 0000 0000 00 00001111 Q ss_pred CCCCccCCC Q lcl|Aclame:pro 408 KGGDNKNEG 416 (416) Q Consensus 408 ~gge~~~~~ 416 (416) +.+++++++ T Consensus 495 ~~~~~~~~~ 503 (511) T protein:vir:96 495 NDDEQDDDT 503 (511) T ss_pred CCCCCCCCc Confidence 111222222 No 192 >protein:vir:9751 Length: 422 # NCBI annotation: putative structural protein # Family: family:all:524 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795513;genbank:gi:28876291;genbank:GeneID:1257832 Probab=98.30 E-value=1.5e-06 Score=52.47 Aligned_cols=357 Identities=15% Similarity=0.119 Sum_probs=162.5 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccc--cccccHH--HH--hccHHHHHHHHHHHHhhccCcceEEeecCC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTAS--GERVSES--NS--LVQPDIFACVNVLSDDIAKLPIHTYKRTDG 74 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~a--~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 74 (416) |.+.++.......... ...+..+.-+..... +..+..+ .. ....+..-+|+.++..+.=-.|. .. + T Consensus 4 ~~i~~L~~~~~~~~~r----~~~~~~yy~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~~Vd~~a~rl~~~Gf~---~~-d 75 (422) T protein:vir:97 4 MGMGYLRRKLALFKTG----VDKRYRYYAMDDRDDTRSIVMPNNVREMYRSVLEWTAKGVDSLADRIIFREFT---ND-D 75 (422) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHhcCCChhhcCccccHHHHHHHHhhcchhHHHHHHHHhccccceee---CC-c Confidence 6666666543322221 112233333322111 1111111 01 11234455566655533222222 11 1 Q ss_pred cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC-CCcEEEEEeeccceEEEEEcCCCcEEEE-- Q lcl|Aclame:pro 75 GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS-HGYPEALFPLRPDYTNAYVHPTTGMLWY-- 151 (416) Q Consensus 75 ~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~-~g~~~~l~~l~p~~v~~~~~~~~~~~~~-- 151 (416) ..+.. ++.+ |. ......++..+.+.+|+||+++..+. .|.| .+.+++|.++....++..+.... T Consensus 76 -------~~l~~-~w~~-N~---ld~~~~~~~~~al~~G~sf~~v~~~~~~~~p-~i~~~sp~~~~~i~D~~~~~~~~a~ 142 (422) T protein:vir:97 76 -------FNAWE-IFKA-NN---PDIFFDTAIQSALIASCCFVYIMPGAEDGLP-KMQVIEASKATGILDPTTFLLTEGY 142 (422) T ss_pred -------hhHHH-HHHh-cC---hHHHHHHHHHHHHHhcceeEEEeeCCCCCee-EEEEechhhEEEEEeCCCCcceeeE Confidence 12333 3233 32 23455577889999999999998875 5665 68888999999888765443211 Q ss_pred -EE--eeCCee---EEech---------------------hheeeeccC-CCCccccccHH----HHHHHHHHHHHHHHH Q lcl|Aclame:pro 152 -QT--VLNGKA---IELYD---------------------YEVLHFKGL-STDGIHGKSPI----GVVREHIGAQAAATK 199 (416) Q Consensus 152 -~~--~~~~~~---~~~~~---------------------~~vih~~~~-~~~~~~G~s~~----~~~~~~i~~~~~~~~ 199 (416) .+ ...+.. ..+++ =.|++|.+. .....+|.|.+ ..+.+.+.....-.. T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~I~e~v~~l~da~~r~~~~~~ 222 (422) T protein:vir:97 143 AILESDSNGNPTLEAYFTDKDIWYYPKKGKPYNIKNPTGHPLLVPIIHRPDAVRPFGRSRITKAGMYHQKAAKRTLERAE 222 (422) T ss_pred EEEEecCCCcEEEEEEEcCceEEEEcCCCccccccCCCCCcceEEecccCCCccccCccccchhHHHHHHHHHHHHHHHH Confidence 11 111110 01111 134555543 23356777754 233333333333333 Q ss_pred HHHHHHhccCCcceeec-cCCcCCHHHHHHHHHHHHHhhcCCceeecCC-----CceeEeccCChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 200 YNAKLYKNEATPRGILK-VPAFLDEKPKENVRKEWKRVNKVENIAIIDY-----GLEYQSISMPLQEAQFVESMKFNKAQ 273 (416) Q Consensus 200 ~~~~~~~n~~~~~~v~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~-----g~~~~~~~~~~~d~~~~e~~~~~~~~ 273 (416) ....++ +.|..++. .+.. ....+.++... +.++.++. +.++.++..+.- ..+.+..+..... T Consensus 223 ~~~e~~---a~pqr~i~G~d~d--~~~~~~~~~~~------~~i~~~~~de~~~~~~v~q~~~~~l-~~~~~~l~~~~~~ 290 (422) T protein:vir:97 223 VTAEFY---SFPQKYVLGMDPD--AKPMEKWRATV------STLLEISKDEDGDKPTVGQFTTASM-APFMEHLKMYASL 290 (422) T ss_pred HHHHHh---cchhhhhcccCcc--cccCchhhhhh------hhhhccCCCCCCCcceeeecCCCCh-hHHHHHHHHHHHH Confidence 333333 23433332 2211 11112222211 23444432 345655443222 2488999999999 Q ss_pred HHHHhccchhhcccccCCCcccHHHH--HHHHHHHHHHHHHHHHHHHHHHhhc----Cchh----cccccchhhhhhhhh Q lcl|Aclame:pro 274 ISMIYKVPLHKLNELDKATFSNIEHQ--SIEYVRNTLQPWIVNFEQELNVKLF----LDHD----QKSGHYVKFNIDSEL 343 (416) Q Consensus 274 Ia~~~gvp~~~lg~~~~~~~s~~e~~--~~~f~~~~l~P~~~~i~~~l~~~l~----~~~~----~~~~~~~~f~~~~l~ 343 (416) |+..-++|++.+|.... |-++.+.. ...-+...++-..+.+.+.+.+.+- .... ......+.+...... T Consensus 291 ~a~~s~lP~~~lg~~~~-NpsSa~Ai~a~~~~L~~ka~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~~~~w~p~~ 369 (422) T protein:vir:97 291 FAGGSGLTLDDLGFPSD-NPSSVESIKAAHENLRAAGRKAQRSFSSGFLNVAYIAVCLRDEFPYLRNQFMDTVIKWEPLF 369 (422) T ss_pred HhcccCCCHHHhccccC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhccceEEEccCC Confidence 99999999999997543 21222221 1111111122233333333332111 0000 001111223333333 Q ss_pred hcc---HHHHHHHHHHHHhC--CCcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCC Q lcl|Aclame:pro 344 RGD---SKTQAEYLKTLHET--GVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKG 409 (416) Q Consensus 344 ~~d---~~~~~~~~~~~~~~--g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~g 409 (416) ..+ ....++++.|++++ |++...-+++++|+...+. -. .. .++.+ .+| T Consensus 370 ~~~~~s~a~~aDa~~Kl~~a~~~~~~~~~~~~~lg~~~~~~---~~--------~~---~~~~~----~d~ 422 (422) T protein:vir:97 370 EADANMLTLVGDGAIKLNQAIPGFMDADVIRDLTGVKGADK---PI--------PA---ITEVT----TDG 422 (422) T ss_pred CCChHHHHHHHHHHHHHHhhccccccHHHHHHHcCCCchhH---HH--------HH---HHhhh----ccC Confidence 344 55667778888888 8899999999999954311 00 00 00100 111 No 193 >protein:vir:96179 Length: 468 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1602 # MgeName: 37 # Cross-refs: genbank:acc:YP_240075;genbank:gi:66395736;genbank:GeneID:5133166 Probab=98.29 E-value=1.7e-06 Score=52.27 Aligned_cols=378 Identities=10% Similarity=-0.028 Sum_probs=170.2 Q ss_pred Ccchhhhcccccccc--------------ccccchhHHHhhhcCcccc-----------ccccccHHHHhccHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSD--------------HEDGFNNILLNMFGGRKTA-----------SGERVSESNSLVQPDIFACVN 55 (416) Q Consensus 1 m~~~~~f~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~a~~~~~v~~~i~ 55 (416) -+|.+.|+.-..... ........+..++-+.... ......++.=+..+....+++ T Consensus 11 ~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~yY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Iv~ 90 (468) T protein:vir:96 11 PYHERVVEQIKPQYETQEEMILRLITKHKENVEDITVGERYYNHQPDVLFNAPKRNVKGEIDPFKPDWRMYTNYHQNLVD 90 (468) T ss_pred eeehheeecccccccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccchHHHHHH Confidence 112222211000000 0000001111222221100 000000111123556677788 Q ss_pred HHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeecc Q lcl|Aclame:pro 56 VLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRP 135 (416) Q Consensus 56 ~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p 135 (416) ..+.-+-+-|..+.-.+ +. ....+...+ . | +.......+..+.+.+|.+|..+..+..|.+ .+..++| T Consensus 91 ~~~~~l~g~p~~~~~~d-~~----~~~~l~~~~-~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p 158 (468) T protein:vir:96 91 QKVAYAVANPVTYGTED-EK----SLKTIQEVL-N--H---KWDDKLVDILTAASNKGVEWIQPYVDEQGEF-KTFRVPA 158 (468) T ss_pred HHHhhhccCCceeccCC-hH----HHHHHHHHH-h--c---CHHHHHHHHHHHHhhcCeEEEEEEEcCCCce-EEEEEcc Confidence 88877777777653221 11 111222222 2 2 3456667788999999999999988888865 5677788 Q ss_pred ceEEEEEcCC--CcEEE--EEEeeCC-eeEE-echhheeeeccC-------------------------------C---- Q lcl|Aclame:pro 136 DYTNAYVHPT--TGMLW--YQTVLNG-KAIE-LYDYEVLHFKGL-------------------------------S---- 174 (416) Q Consensus 136 ~~v~~~~~~~--~~~~~--~~~~~~~-~~~~-~~~~~vih~~~~-------------------------------~---- 174 (416) ..+-+..++. +...+ +.+...+ ..+. +.+..+.+.+.. + T Consensus 159 ~~~~~v~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvv~~ 238 (468) T protein:vir:96 159 EQAIPIWTNKERDELKAFIRLYELDGGERVEYWTANDVTFYELKDGQLIPDYYQGEEHVQAHYYVGNKSMSWNRVPFIPF 238 (468) T ss_pred cceEEEEcCCCCCceEEEEEEEEecCceEEEEEeCCeEEEEEEcCCceeecccccccccccceeeccccccCCcccEEEe Confidence 8887776542 22211 1111111 1111 112222211100 0 Q ss_pred CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecC--CCceeE Q lcl|Aclame:pro 175 TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIID--YGLEYQ 252 (416) Q Consensus 175 ~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~--~g~~~~ 252 (416) .+...|.|.++.+...++....+.....+.++..+.|-.+++--...+. +.... ....++++.++ ++.+.. T Consensus 239 ~n~~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~~~~~---~~~~~----~~~~~~~i~~~~d~~~~~~ 311 (468) T protein:vir:96 239 KNNPQEVSDLFMYKTIIDAMDKRLSDTQNTFDEATELIYVLKGYEGEDL---EEFMY----NLKYYKAINVDGDGSGGVD 311 (468) T ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCcccc---chhhh----hhhcCceEEecCCCCCcce Confidence 1134578888877777777776666666677777777666653221111 11111 11223344443 344444 Q ss_pred eccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 253 SISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELN 320 (416) Q Consensus 253 ~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~ 320 (416) .+........+.+..+...+.|+..-++|..-. ....++-|... +.....+..++.-+++.|...+. T Consensus 312 ~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~-~~~~~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~g 390 (468) T protein:vir:96 312 TIQIDVPVQSAKEYLDMLRDYVIEFGQGVDFQQ-DKFGNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYK 390 (468) T ss_pred EEeecCChHHHHHHHHHHHHHHHHHhCcccccc-cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC Confidence 455445556667778888999999999885322 22222222110 11222233333333333332221 Q ss_pred HhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccccccccccc Q lcl|Aclame:pro 321 VKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQR 400 (416) Q Consensus 321 ~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~ 400 (416) . .... ..+.+.++.-+..|..+.++ .+.++|+++.-.+.++++.-..|. .-+..+.. +..+. T Consensus 391 ~-----~~d~--~~i~i~f~~~~p~d~~e~a~---~~~~~g~iS~et~i~~l~~v~D~~-------~E~~ri~~-E~~~~ 452 (468) T protein:vir:96 391 L-----SIKV--QDVEITFNFNVMVNELEQSQ---IGVNSQYLSKETVVTNHPWVDDPV-------AEMERIDQ-EELAL 452 (468) T ss_pred C-----Cccc--ceeeEEecCCCCcCHHHHHH---HHHhcCCCchHHHHHhCCCCCCHH-------HHHHHHHH-HHHHH Confidence 1 1111 12333344445566655554 455679999988888774422111 00111100 11111 Q ss_pred ccCCcccCCCCccCCC Q lcl|Aclame:pro 401 LKAGGAMKGGDNKNEG 416 (416) Q Consensus 401 ~~~~~~~~gge~~~~~ 416 (416) .+.....+|+++++-+ T Consensus 453 ~~~~~~~~~~~~~~~~ 468 (468) T protein:vir:96 453 PSIEEGLNGKENNEPT 468 (468) T ss_pred HHHhhccCCCCCCCCC Confidence 1222334455554444 No 194 >protein:vir:97447 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1676 # MgeName: 92 # Cross-refs: genbank:acc:YP_240744;genbank:gi:66396413;genbank:GeneID:5133803 Probab=98.26 E-value=2e-06 Score=51.87 Aligned_cols=379 Identities=11% Similarity=0.012 Sum_probs=174.6 Q ss_pred Ccchhhhcccccccc----------ccccchhH-----------------HHhhhcCccc--------cccccc---cHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSD----------HEDGFNNI-----------------LLNMFGGRKT--------ASGERV---SES 42 (416) Q Consensus 1 m~~~~~f~~~~~~~~----------~~~~~~~~-----------------~~~~~~~~~~--------~~~~~~---~~~ 42 (416) || ++|+-.-..+. ........ +..++.+-.. ...... ... T Consensus 1 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~ 78 (474) T protein:vir:97 1 MF--NIIRMPWDKPYGEEVVEQLKPQFETQEEMIVRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVHGNIDYDKPD 78 (474) T ss_pred Cc--ccccccCCCchhhHHHHhhhhcccCHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccchhccccccccccCc Confidence 22 22221100000 00000011 1111111100 000000 000 Q ss_pred HHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec Q lcl|Aclame:pro 43 NSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG 122 (416) Q Consensus 43 ~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~ 122 (416) .-...+....+|+..+..+-.-|+.+-..+ +.. . ..+..++. | ........+..+.+.+|.||.++..+ T Consensus 79 ~ki~~n~~k~Ivd~~~~~l~g~p~~~~~~d-~~~----~-~~l~~~~~--n---~~~~~~~e~~~~~~~~G~~~~~~~~d 147 (474) T protein:vir:97 79 WRITTNFHQNLVDQKVSYVASKPVTYSCED-ENV----L-KVIHDVLD--T---RWDNKLIDILTATSNKGIDWLQVYIN 147 (474) T ss_pred ceeecchHHHHHHHHHhhhhcCCceeccCc-HHH----H-HHHHHHHh--c---cHHHHHHHHHHHHhhcCceEEEEEec Confidence 112355677788888888888888753221 111 1 12222322 2 24466667788899999999999999 Q ss_pred CCCcEEEEEeeccceEEEEEcCCC--cEEE--EEEeeCC-eeE-Eechhheeeecc------------------------ Q lcl|Aclame:pro 123 SHGYPEALFPLRPDYTNAYVHPTT--GMLW--YQTVLNG-KAI-ELYDYEVLHFKG------------------------ 172 (416) Q Consensus 123 ~~g~~~~l~~l~p~~v~~~~~~~~--~~~~--~~~~~~~-~~~-~~~~~~vih~~~------------------------ 172 (416) ..|++ .+..++|..+-+..++.. ...+ +.+...+ ... .+.+..+.+.+. T Consensus 148 ~~~~~-~i~~~~p~~~~~v~d~~~~~~~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (474) T protein:vir:97 148 ENGEM-KLFRVPAEQAIPIWVDKEREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGN 226 (474) T ss_pred CCCee-EEEEEcccceEEEEcCCCCCceEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccC Confidence 98875 566788888888876532 2111 1111111 101 111122211110 Q ss_pred ---CC----CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeec Q lcl|Aclame:pro 173 ---LS----TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAII 245 (416) Q Consensus 173 ---~~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl 245 (416) .+ .+...|.|.+..+...++....+.....+.+...+.|..+++--...+ .+.... .....+++.+ T Consensus 227 ~g~vPvv~~~nn~~g~sd~e~v~~liDa~n~~~s~~~~~~~~~~~~~lv~~g~~~~~---~~~~~~----~~~~~~~i~~ 299 (474) T protein:vir:97 227 WGRVPFIAFKNNPEEVSDIWMYKSIIDAIDKRLSDAQNMFDESVELIYILKGYEGED---LEEFMR----GLKYYKAINV 299 (474) T ss_pred CCccceEEecCCcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCccc---chhhhh----hhhccceeec Confidence 00 112468888888888888777666666666777777766665422111 111111 1223456667 Q ss_pred CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 246 DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIV 313 (416) Q Consensus 246 ~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~ 313 (416) +++.+...+........+.+..+...+.|...-++|..-.... .++-|.. .......+..+|..+++ T Consensus 300 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~-~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~ 378 (474) T protein:vir:97 300 DGDGGVETIQVEVPVSSTKEYIDLMRVYIMEFGQGVDFQTDKF-GSAPSGIALKFLYGNLDLKANKLKNKATVAIQELIS 378 (474) T ss_pred cCCCceeEEeecCCHHHHHHHHHHHHHHHHHHhCccccCcccc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 7776666666555666667778888889999988875322211 1221211 01122344445555555 Q ss_pred HHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEee-----c Q lcl|Aclame:pro 314 NFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYIS-----S 386 (416) Q Consensus 314 ~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~-----~ 386 (416) .|...++.+ .......+.| +.-+..+..+.++ .+..+|+++.--++++++.-+.|. .+.+-- . T Consensus 379 li~~~~~~~-----~d~~~i~v~f--~~~~p~~~~e~a~---~~~~~g~iS~et~l~~l~~v~D~~~E~eri~~E~~~~~ 448 (474) T protein:vir:97 379 FIIDFNNLK-----TDVKDIEISF--NFNRMMNDAEQSQ---IIAQSQYLSRETLVKSSPLVDDYKAELERIEQEQMEYN 448 (474) T ss_pred HHHHHhCCC-----cccceeeEEe--ccCcccCHHHHHH---HHHHcCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH Confidence 554433321 1112233444 4444455555444 455679999999998886532211 000000 0 Q ss_pred cCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 387 LNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 387 ~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ....+.+..+. .. +..+.++++.++ T Consensus 449 ~~~~~~~~~~~---~~--~~~~~~~~~~~~ 473 (474) T protein:vir:97 449 KQLPNLDDGGA---DG--AQQQEGSNNKES 473 (474) T ss_pred hhccccCCCCC---CC--cccCCCCccccc Confidence 00000000000 00 000111111111 No 195 >protein:vir:94498 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1508 # MgeName: 88 # Cross-refs: genbank:acc:YP_240672;genbank:gi:66396340;genbank:GeneID:5133762 Probab=98.26 E-value=2e-06 Score=51.87 Aligned_cols=379 Identities=11% Similarity=0.012 Sum_probs=174.6 Q ss_pred Ccchhhhcccccccc----------ccccchhH-----------------HHhhhcCccc--------cccccc---cHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSD----------HEDGFNNI-----------------LLNMFGGRKT--------ASGERV---SES 42 (416) Q Consensus 1 m~~~~~f~~~~~~~~----------~~~~~~~~-----------------~~~~~~~~~~--------~~~~~~---~~~ 42 (416) || ++|+-.-..+. ........ +..++.+-.. ...... ... T Consensus 1 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~ 78 (474) T protein:vir:94 1 MF--NIIRMPWDKPYGEEVVEQLKPQFETQEEMIVRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVHGNIDYDKPD 78 (474) T ss_pred Cc--ccccccCCCchhhHHHHhhhhcccCHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccchhccccccccccCc Confidence 22 22221100000 00000011 1111111100 000000 000 Q ss_pred HHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec Q lcl|Aclame:pro 43 NSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG 122 (416) Q Consensus 43 ~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~ 122 (416) .-...+....+|+..+..+-.-|+.+-..+ +.. . ..+..++. | ........+..+.+.+|.||.++..+ T Consensus 79 ~ki~~n~~k~Ivd~~~~~l~g~p~~~~~~d-~~~----~-~~l~~~~~--n---~~~~~~~e~~~~~~~~G~~~~~~~~d 147 (474) T protein:vir:94 79 WRITTNFHQNLVDQKVSYVASKPVTYSCED-ENV----L-KVIHDVLD--T---RWDNKLIDILTATSNKGIDWLQVYIN 147 (474) T ss_pred ceeecchHHHHHHHHHhhhhcCCceeccCc-HHH----H-HHHHHHHh--c---cHHHHHHHHHHHHhhcCceEEEEEec Confidence 112355677788888888888888753221 111 1 12222322 2 24466667788899999999999999 Q ss_pred CCCcEEEEEeeccceEEEEEcCCC--cEEE--EEEeeCC-eeE-Eechhheeeecc------------------------ Q lcl|Aclame:pro 123 SHGYPEALFPLRPDYTNAYVHPTT--GMLW--YQTVLNG-KAI-ELYDYEVLHFKG------------------------ 172 (416) Q Consensus 123 ~~g~~~~l~~l~p~~v~~~~~~~~--~~~~--~~~~~~~-~~~-~~~~~~vih~~~------------------------ 172 (416) ..|++ .+..++|..+-+..++.. ...+ +.+...+ ... .+.+..+.+.+. T Consensus 148 ~~~~~-~i~~~~p~~~~~v~d~~~~~~~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (474) T protein:vir:94 148 ENGEM-KLFRVPAEQAIPIWVDKEREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGN 226 (474) T ss_pred CCCee-EEEEEcccceEEEEcCCCCCceEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccC Confidence 98875 566788888888876532 2111 1111111 101 111122211110 Q ss_pred ---CC----CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeec Q lcl|Aclame:pro 173 ---LS----TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAII 245 (416) Q Consensus 173 ---~~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl 245 (416) .+ .+...|.|.+..+...++....+.....+.+...+.|..+++--...+ .+.... .....+++.+ T Consensus 227 ~g~vPvv~~~nn~~g~sd~e~v~~liDa~n~~~s~~~~~~~~~~~~~lv~~g~~~~~---~~~~~~----~~~~~~~i~~ 299 (474) T protein:vir:94 227 WGRVPFIAFKNNPEEVSDIWMYKSIIDAIDKRLSDAQNMFDESVELIYILKGYEGED---LEEFMR----GLKYYKAINV 299 (474) T ss_pred CCccceEEecCCcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCccc---chhhhh----hhhccceeec Confidence 00 112468888888888888777666666666777777766665422111 111111 1223456667 Q ss_pred CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 246 DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIV 313 (416) Q Consensus 246 ~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~ 313 (416) +++.+...+........+.+..+...+.|...-++|..-.... .++-|.. .......+..+|..+++ T Consensus 300 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~-~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~ 378 (474) T protein:vir:94 300 DGDGGVETIQVEVPVSSTKEYIDLMRVYIMEFGQGVDFQTDKF-GSAPSGIALKFLYGNLDLKANKLKNKATVAIQELIS 378 (474) T ss_pred cCCCceeEEeecCCHHHHHHHHHHHHHHHHHHhCccccCcccc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 7776666666555666667778888889999988875322211 1221211 01122344445555555 Q ss_pred HHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEee-----c Q lcl|Aclame:pro 314 NFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYIS-----S 386 (416) Q Consensus 314 ~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~-----~ 386 (416) .|...++.+ .......+.| +.-+..+..+.++ .+..+|+++.--++++++.-+.|. .+.+-- . T Consensus 379 li~~~~~~~-----~d~~~i~v~f--~~~~p~~~~e~a~---~~~~~g~iS~et~l~~l~~v~D~~~E~eri~~E~~~~~ 448 (474) T protein:vir:94 379 FIIDFNNLK-----TDVKDIEISF--NFNRMMNDAEQSQ---IIAQSQYLSRETLVKSSPLVDDYKAELERIEQEQMEYN 448 (474) T ss_pred HHHHHhCCC-----cccceeeEEe--ccCcccCHHHHHH---HHHHcCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH Confidence 554433321 1112233444 4444455555444 455679999999998886532211 000000 0 Q ss_pred cCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 387 LNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 387 ~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ....+.+..+. .. +..+.++++.++ T Consensus 449 ~~~~~~~~~~~---~~--~~~~~~~~~~~~ 473 (474) T protein:vir:94 449 KQLPNLDDGGA---DG--AQQQEGSNNKES 473 (474) T ss_pred hhccccCCCCC---CC--cccCCCCccccc Confidence 00000000000 00 000111111111 No 196 >protein:vir:105461 Length: 470 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529871;genbank:gi:90592611;genbank:GeneID:3974525 Probab=98.25 E-value=2.1e-06 Score=51.71 Aligned_cols=376 Identities=13% Similarity=0.045 Sum_probs=183.1 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccc------c------ccccc---cHHHHhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKT------A------SGERV---SESNSLVQPDIFACVNVLSDDIAKLP 65 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~------~------~~~~~---~~~~a~~~~~v~~~i~~ia~~ia~~~ 65 (416) -++++....+...-.. ...+..++.+... . ..... ....-+.+......|+..+.-+-+-| T Consensus 8 ~~i~~~~~~~~~~~~~----~~~~~~Yy~g~~~I~~~~~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~G~p 83 (470) T protein:vir:10 8 KLIQNTSTSRNDLINN----YKQAVNYYENKTDITTRNNGKAKLNKEGKKDPLRSADNRIPSNFYQLLVDQEAGYVASVF 83 (470) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHhccccchhccccchhcccccccccccccCCcccccchHHHHHHhhhhheeccc Confidence 1111111111100000 0001111111000 0 00000 00111234455667888888888888 Q ss_pred ceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC Q lcl|Aclame:pro 66 IHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT 145 (416) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~ 145 (416) +.+...+++ . ...+...+. .+..+-...+..++..+|.+|.++..+..|.+ .+..++|..+-+..++. T Consensus 84 ~~~~~~d~~-~----~~~l~~~~~------~~~~~~~~~l~~~~~~~G~a~~~~y~d~~~~~-~~~~~~p~~~~~v~d~~ 151 (470) T protein:vir:10 84 PDIDVGKDA-D----NKKIIDVLG------DDRALTLNGLLVDSSNAGRAWLHYWIDEDGNF-RYGIIQPDQITPIYATT 151 (470) T ss_pred eeeecCchH-H----HHHHHHHHh------hhHHHHHHHHHHHHhhcCeeEEEEEecCCCce-EEEEEcccceEEEEcCC Confidence 775433221 1 112223332 13445556778889999999999999998875 56778888888887654 Q ss_pred C--cEE----EEEEee-CCe-e---E-EechhheeeeccC-------------------------------------C-- Q lcl|Aclame:pro 146 T--GML----WYQTVL-NGK-A---I-ELYDYEVLHFKGL-------------------------------------S-- 174 (416) Q Consensus 146 ~--~~~----~~~~~~-~~~-~---~-~~~~~~vih~~~~-------------------------------------~-- 174 (416) . ... +|.... .+. . + .+.+..+.|++.. + T Consensus 152 ~~~~~~a~ir~y~~~~~~~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv 231 (470) T protein:vir:10 152 LDNKLLGILRSYKQLDPDSGKYFTVHEYWTDKEAQFFRTNATDSTVIEPYNIITSYDLSAGYETGQSNTLKHNFGRVPFI 231 (470) T ss_pred CCCceEEEEEEEEeeecCCceEEEEEEEEcCCcEEEEEeecCcceeccccccccccccccccccccccccccCCCeeeEE Confidence 2 111 221111 111 0 0 1122222222100 0 Q ss_pred --CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCC-HHHHHHHHHHHHHhhcCCceeecC----- Q lcl|Aclame:pro 175 --TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLD-EKPKENVRKEWKRVNKVENIAIID----- 246 (416) Q Consensus 175 --~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~vl~----- 246 (416) .+...|.|.++.+...++....+.....+.+...+.|-.+++--...+ ++... . .... +.+.++ T Consensus 232 ~~~nn~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lvl~g~~~~~~~~~~~----~---~~~~-~~i~~~~~~~~ 303 (470) T protein:vir:10 232 EFSKNKYRLPELNKYKGLIDAYDDIYNGFINDLDDVQTVILVLTNYGGADLHQFMN----D---LRKY-KSIKINNTGNG 303 (470) T ss_pred EeecCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhcCcceeeecCCccccchhhh----h---hhhc-CeEeccCCCCC Confidence 012357888888888888877777777777777777777776432222 22111 1 1112 233332 Q ss_pred CCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 247 YGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVN 314 (416) Q Consensus 247 ~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~ 314 (416) .+.+++-+........+....+...+.|+..-++|..-... .|+-|.. .......+..+|.-+++. T Consensus 304 ~~~~~~~lt~~~~~~~~~~~~~~L~~~I~~~s~~p~~~~~~--~gn~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~ 381 (470) T protein:vir:10 304 DNSGVDKLQIDIPVEARDDALKITRKNIFLFGQGIDPANFE--SSNASGVAIKMLYSHLELKAAKTQTYFEHAINELVRA 381 (470) T ss_pred cCceeEEEeecCChHHHHHHHHHHHHHHHHHhCCCCCCccc--cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 13344444443444456677788888999888888532221 1222211 112233344445555555 Q ss_pred HHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCcccccc Q lcl|Aclame:pro 315 FEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDF 394 (416) Q Consensus 315 i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~ 394 (416) |...++.+ + .....+.+.++.-+..|..+.++.+.++ +|+++.--+.+++++-..|. .++ -. ...+. T Consensus 382 i~~~l~~~-----~-~d~~~i~i~f~~~~p~d~~e~~~~~~~~--~g~iS~et~l~~~p~v~D~~-~E~-er---i~~E~ 448 (470) T protein:vir:10 382 IMRYLNFS-----D-ADKRHISQHWTRTKVEDSLTKAQIVSTV--ANYSSKEAVAKANPIVDDWQ-QEL-KD---LAKDK 448 (470) T ss_pred HHHHhccc-----C-cccceeeEEeccCCCCCHHHHHHHHHHH--hccCcHHHHHHhCCCCCCHH-HHH-HH---HHHHH Confidence 54444321 1 1123466666778889999999998887 68999988888875532211 000 00 00011 Q ss_pred ccc-cccccCCcccCCCCccCC Q lcl|Aclame:pro 395 LEE-YQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 395 ~~~-~~~~~~~~~~~gge~~~~ 415 (416) ... ....+.....++|++++| T Consensus 449 ~e~~~~~~~~~~~~~~~~dde~ 470 (470) T protein:vir:10 449 EENDPYSNQADELNGKGVNDEQ 470 (470) T ss_pred HHHHHhhccccccCCCCCCCCC Confidence 011 111222334456777777 No 197 >protein:vir:105292 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1679 # MgeName: PH15 # Cross-refs: genbank:acc:YP_950666;genbank:gi:119967836;genbank:GeneID:4643171 Probab=98.22 E-value=2.4e-06 Score=51.41 Aligned_cols=377 Identities=11% Similarity=0.036 Sum_probs=171.7 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccc-------c--ccccc--cHHHHhccHHHHHHHHHHHHhhccCcceEE Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKT-------A--SGERV--SESNSLVQPDIFACVNVLSDDIAKLPIHTY 69 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~--~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 69 (416) =++.++.......-.. ...+..++-+-.. . ..... ....-+.++....+|+..+.-+-.-|+.+. T Consensus 29 ~~i~~~i~~~~~~~~~----~~~~~~yY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g~~~~~~ 104 (478) T protein:vir:10 29 EMILRLVREHKENIDN----ITMGERYYNHHPDILDAPPKRDVNGDYDETKPDWRMYTNYHQNLVDQKVAYAVANPVTFG 104 (478) T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHhcCCCchhccccccccccccccccccceeccchHHHHHHHHHhhhccCCeeee Confidence 0011111110000000 0001111111000 0 00000 000112345667788888888888888753 Q ss_pred eecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC--c Q lcl|Aclame:pro 70 KRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT--G 147 (416) Q Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~--~ 147 (416) . +++.. ...+...+ . | ...+....+..+.+.+|.+|+.+..+..|++ .+..++|..+.+..++.. . T Consensus 105 ~-~~d~~----~~~l~~~~-~--n---~~~~~~~~~~~~~~~~G~~~~~~~~d~~g~~-~~~~~~p~~~~~i~d~~~~~~ 172 (478) T protein:vir:10 105 V-DNDKA----LKQIQHTL-N--H---KWDDKLVDILTAASNKGIEWVQPYVDEEGEF-KTFRVPAEQAVPIWTNKERDE 172 (478) T ss_pred c-CChHH----HHHHHHHH-h--c---CHHHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEEcCCCCCc Confidence 2 22211 11122222 2 2 3456677788899999999999998888876 577788888888776432 1 Q ss_pred EEE--EEEeeCC-eeE-Eechhh---------------------------------------eeeeccCCCCccccccHH Q lcl|Aclame:pro 148 MLW--YQTVLNG-KAI-ELYDYE---------------------------------------VLHFKGLSTDGIHGKSPI 184 (416) Q Consensus 148 ~~~--~~~~~~~-~~~-~~~~~~---------------------------------------vih~~~~~~~~~~G~s~~ 184 (416) ... +.+...+ ..+ .+.++. |++++ +...|.|.+ T Consensus 173 ~~~~v~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~----n~~~g~sd~ 248 (478) T protein:vir:10 173 LQAFIRVYELDGAERVEYWTKDDVTYYELKEGQLIPDFYRSDDHIQPHYYQGNKLMSWGRVPFIPFK----NNPQEVSDL 248 (478) T ss_pred eEEEEEEEEecCceEEEEEeCCeEEEEEEcCCeeeccccccccccccceecccccccCCccceEEec----cCCCCCCcH Confidence 111 1111111 111 111112 22222 233588888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeec--CCCceeEeccCChhhHH Q lcl|Aclame:pro 185 GVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAII--DYGLEYQSISMPLQEAQ 262 (416) Q Consensus 185 ~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl--~~g~~~~~~~~~~~d~~ 262 (416) ..+...++..........+.+...+.|-.+++--...+ .+..... . ...+++.+ ++|.+...+........ T Consensus 249 ~~v~~liDa~~~~~S~~~~~~~~~~~p~~~~~g~~~~~---~~~~~~~---~-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 321 (478) T protein:vir:10 249 FMYKTIIDALDKRLSDTQNTFDESVELIYILKGYEGED---MKDFMHN---L-KYYKAISVAGESGSGVDTIKVEVPIDS 321 (478) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCccc---cchhhhh---h-hhcceEEecCCCCCcceEEeecCChHH Confidence 87777777777666666666676677766654322111 1111111 1 12233333 23444444444445566 Q ss_pred HHHHHHHHHHHHHHHhccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcc Q lcl|Aclame:pro 263 FVESMKFNKAQISMIYKVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQK 330 (416) Q Consensus 263 ~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~ 330 (416) +.+..+...+.|+..-++|..-.... .++-|... ......+..++.-+++.|...+.. .. T Consensus 322 ~~~~~~~l~~~i~~~s~~p~~~~~~~-~~n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~g~----~~--- 393 (478) T protein:vir:10 322 VKEYTKMLRDYIIEFGQGVDFQQDKF-GNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYRL----DV--- 393 (478) T ss_pred HHHHHHHHHHHHHHHhCccccCcccc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----Cc--- Confidence 77888888899999999885433221 12211110 112222333333333333322211 11 Q ss_pred cccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCccccccccccccccCCc-cc Q lcl|Aclame:pro 331 SGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQRLKAGG-AM 407 (416) Q Consensus 331 ~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~~~~~~-~~ 407 (416) ....+.+.++.-+..|..+.++.+.++ +|+++.-.+.+++++-..+. .+.+--- +-..............++ +. T Consensus 394 ~~~~i~i~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l~~v~D~~~E~~ri~~E-~~~~~~~~~~~~~~~~~~~~~ 470 (478) T protein:vir:10 394 KVQDIEITFNFNVMVNELENSQIAMNS--TGLLSKETILSNHAWVEDPVAEMERIEQE-NIELNQQLPDIEEGLNGEQQR 470 (478) T ss_pred ccccceEEecCCCCCCHHHHHHHHHHH--hCCCChHHHHHhCCCCCCHHHHHHHHHHH-HHHHHhhccccccccCCCCCC Confidence 112344445566778889999988887 78999999999887643221 1111100 000000000000000001 11 Q ss_pred CCCCccCC Q lcl|Aclame:pro 408 KGGDNKNE 415 (416) Q Consensus 408 ~gge~~~~ 415 (416) +..+++.| T Consensus 471 ~~~~~~~~ 478 (478) T protein:vir:10 471 QSENNQPE 478 (478) T ss_pred CCCCCCCC Confidence 11222222 No 198 >protein:vir:4782 Length: 522 # NCBI annotation: putative minor capsid protein 1 # Family: family:all:898 # MgeID: mge:104 # MgeName: MM1 # Cross-refs: genbank:acc:NP_150162;swissprot:trembl:q94m49;genbank:gi:26553451;uniprot:Q94M49;genbank:GeneID:955983 Probab=98.20 E-value=2.6e-06 Score=51.16 Aligned_cols=396 Identities=8% Similarity=0.008 Sum_probs=186.3 Q ss_pred Ccchhhhcc---cccc--ccc-cccch-------hHHHhhhcCcccc-----ccccccHHHHhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 1 MLLERMFEK---RSGS--SDH-EDGFN-------NILLNMFGGRKTA-----SGERVSESNSLVQPDIFACVNVLSDDIA 62 (416) Q Consensus 1 m~~~~~f~~---~~~~--~~~-~~~~~-------~~~~~~~~~~~~~-----~~~~~~~~~a~~~~~v~~~i~~ia~~ia 62 (416) =+|++++.+ ++.. +.. ..... .....++.+.... .......+...+......+++.+|+-+. T Consensus 9 ~~~~k~~~~~~~~~~~~i~~~~~i~~~~~~~~~i~~~~~~y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~~~~A~lv~ 88 (522) T protein:vir:47 9 DFFSRGRYYMQTSNLNSILEHPKIAVTQEEYDRIKRNLVYYQSKWDDVQYKNTDGDIKSRPMNHLPIARTASKKIASLVY 88 (522) T ss_pred HHHHHHHHHhhcccchhccccCCCCCCHHHHHHHHHHHHHhcCCcccccccccCcchhcccceecchHHHHHHHHhhhhc Confidence 033333321 1111 110 00001 1112222221110 0000111122333444556666666665 Q ss_pred cCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEE Q lcl|Aclame:pro 63 KLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYV 142 (416) Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~ 142 (416) .=|..+.-.+ + .....+..++.. -.....+...+...+..|-+++.+..+. |.+ .+..+++..+-+.. T Consensus 89 ~e~~~i~v~d-~-----~~~~~l~~~l~~----n~f~~~~~~~~e~a~a~G~~a~k~~~d~-~~~-~i~~v~ad~~~P~~ 156 (522) T protein:vir:47 89 NEQATITTKN-E-----ILQKFLDDMLTN----DRFNKNFERYLESCLALGGLAMRPYIDG-DKV-RVAFIQAPVFFPLE 156 (522) T ss_pred CCcceeecCC-h-----HHHHHHHHHHhh----cchHHHHHHHHHHhhccCCEEEEEEEcC-Cce-EEEEEcCCceEEEE Confidence 5444433211 1 011122222221 2234556667777778888888887764 332 34445555444432 Q ss_pred cCCCc-----------------EEEEE-------------------------Ee-----eC-----CeeEE--------- Q lcl|Aclame:pro 143 HPTTG-----------------MLWYQ-------------------------TV-----LN-----GKAIE--------- 161 (416) Q Consensus 143 ~~~~~-----------------~~~~~-------------------------~~-----~~-----~~~~~--------- 161 (416) .+.++ ..+|. +. .. +..+. T Consensus 157 ~~~~~~~e~a~~~~~~~~~~~~~~~yt~lE~he~~~~~~~~~~~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~e~~~ 236 (522) T protein:vir:47 157 SNTQDVSSAAILTKTIKSEGRKNVYYTLVEFHEWVTADGQETGSTNDKKYYRITNELYRSDVNDVLGQRVNLSELDKYKN 236 (522) T ss_pred EcCCceEEEEEEEEEEeecccceeEEEEEEEeeecccccccccccccCCceEEEEEEeecCCCcccCccccccccccccC Confidence 11111 11111 00 00 00000 Q ss_pred ech---------hheeeeccCCCC-----ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCc----ceeeccCCcCCH Q lcl|Aclame:pro 162 LYD---------YEVLHFKGLSTD-----GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATP----RGILKVPAFLDE 223 (416) Q Consensus 162 ~~~---------~~vih~~~~~~~-----~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~----~~v~~~~~~~~~ 223 (416) +.+ --+.||+.+..+ ...|+|....+...++.....-.....-++-|... ..+++....... T Consensus 237 l~~~~~~~~~~~Plf~y~~~~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g~~~i~v~~~~l~~~~~~~~ 316 (522) T protein:vir:47 237 LEPVTVFENLSRPLFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINRSYDEFMWEVRMGQRRVIVPEHLTQRQYQRPD 316 (522) T ss_pred CCCceEeCCCCcceEEEecCCcccccccCCCcCCchhhhhHHHHHHHHHHHHHHHHHHHhccceeecchHHhccCCCCCC Confidence 000 012355543222 35799999999999988888877777777766542 222332211110 Q ss_pred HHHHHHHHHHH---HhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH- Q lcl|Aclame:pro 224 KPKENVRKEWK---RVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ- 299 (416) Q Consensus 224 e~~~~~~~~~~---~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~- 299 (416) ... .....|. ..+.+.+. -.+++-+++.++....+-++.+..+...+.|+...|+++..++...++. .++.+. T Consensus 317 g~~-~~~~~fd~~~~~f~~~~~-~~~~~~~i~~~~~~ir~e~~~~~~~~~l~~i~~~~gls~~tf~~~~~~~-kTAtEi~ 393 (522) T protein:vir:47 317 GTI-DFRPRFDVEQNVYMQIGG-SSMDAGGITDLTSPIRANDYILAISEGLKLFEMQIGVSSGMFTFDGQGM-KTATEIV 393 (522) T ss_pred ccc-ccccccCcccceEeecCC-CCCCCCcceeeccccChHHHHHHHHHHHHHHHHHhCCCccccCcccccc-ccHHHHH Confidence 000 0000110 11111100 1123445777787888889999999999999999999999998766543 333333 Q ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHH Q lcl|Aclame:pro 300 ------------SIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDE 367 (416) Q Consensus 300 ------------~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE 367 (416) ....++.+|..++..|....+..-+..........+.+++++-+..|.++.++...+++.+|+|++-+ T Consensus 394 s~~~~~~~t~~~~~~~~~~al~~lv~~i~~l~~~~~~~~~~~~~~~~i~v~f~D~i~~D~~~~~~~~~~~v~aG~~s~e~ 473 (522) T protein:vir:47 394 SENSDTYQMRSSIVALVEQSIKELCVSMCELGKAVGVYSGEIPELDDISVNLDDGVFTDRHAELDYWAKMVAAGFSTKKR 473 (522) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceeEEEcCCCCCCCHHHHHHHHHHHHhcCCCCHHH Confidence 34445555555555555444321111111223456788888989999999999999999999999999 Q ss_pred HHHHh-CCCCCCCCCeEeecc--CccccccccccccccC--CcccCCCCccCCC Q lcl|Aclame:pro 368 IRELL-ERNPIENGDKYISSL--NYVFLDFLEEYQRLKA--GGAMKGGDNKNEG 416 (416) Q Consensus 368 ~R~~~-gl~p~~ggd~~~~~~--n~~~~~~~~~~~~~~~--~~~~~gge~~~~~ 416 (416) ++.++ |++.-+ .++-+-.. ...+.. +...+- ++..+....+++| T Consensus 474 ~i~~~~g~~eee-a~~el~ri~~E~~~~~----~~~~~~~~~~~~~~~~~d~~~ 522 (522) T protein:vir:47 474 AIGKTLNISGVE-AEKELNAINSELLPMN----DAELAIYGMHDQNEEKADDKG 522 (522) T ss_pred HHHhcCCCChHH-HHHHHHHHHHhhccCC----CCCCCCCCCCCcccccCCCCC Confidence 87653 554311 11111000 000000 000000 1122233444444 No 199 >protein:vir:8184 Length: 474 # NCBI annotation: gp4 # Family: family:all:524 # MgeID: mge:153 # MgeName: Che9d # Cross-refs: genbank:acc:NP_817977;genbank:gi:29566411;genbank:GeneID:2700965 Probab=98.19 E-value=2.8e-06 Score=51.03 Aligned_cols=383 Identities=10% Similarity=-0.021 Sum_probs=169.1 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccc--ccc---HHHHhccHHHHHHHHHHHHhhccCcceEEeecCCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGE--RVS---ESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGG 75 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~ 75 (416) -+++.+-.++... ..+..++.+-...... .+. ........+..-||+.++..+.--.|.+- + + T Consensus 22 ~L~~~~~~~~~~~--------~~~~~Yy~G~~~~~~~~~~~p~~~r~~~~v~nw~~~~Vd~~a~rl~~~Gf~~~---d-~ 89 (474) T protein:vir:81 22 GLLAQIENLRWKN--------LLRTSYYENKRTIQYVGTLIPPQYFNLGLVLGWTGKAVDALARRCNLEGFVWP---D-G 89 (474) T ss_pred HHHHHHHHHhhHH--------HHHHHHhccCCChhhccccccHHHHHHHhhcChHHHHHHHHHhhhcccceECC---C-C Confidence 1222222111111 1111222221111111 111 11112345667788888876655555431 1 1 Q ss_pred ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcE-EEEEeeccceEEEEEcCCCcEEEE--- Q lcl|Aclame:pro 76 IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYP-EALFPLRPDYTNAYVHPTTGMLWY--- 151 (416) Q Consensus 76 ~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~-~~l~~l~p~~v~~~~~~~~~~~~~--- 151 (416) . .++..++.++.+.+- ......+..+.+.+|++|+.+..+..|.+ ..+.+++|.++....|+..+...+ T Consensus 90 ~---~~~~~l~~iw~~N~l----d~~~~~~~~~al~~G~sf~~V~~~~d~~~~~~i~~~sp~~~~~~~D~~~~~~~~al~ 162 (474) T protein:vir:81 90 D---LDSLGGTEVVDDNHL----LSEIDSAIVAAMQHGPAFLINTVGEDDEPEALIHVKDASEATGEWNRRRRGLNNLLS 162 (474) T ss_pred C---ccchHHHHHHHhcCh----hHHHHHHHHHHHhhCceeEEEecCCCCCceeEEEEeccceEEEEEeCCCCcceeeeE Confidence 1 011112334333332 25566778899999999999988777765 467788998888877765433111 Q ss_pred --EEeeCCee---EEechh-------------------------heeeeccC-CCCccccccHH----HHHHHHHHHHHH Q lcl|Aclame:pro 152 --QTVLNGKA---IELYDY-------------------------EVLHFKGL-STDGIHGKSPI----GVVREHIGAQAA 196 (416) Q Consensus 152 --~~~~~~~~---~~~~~~-------------------------~vih~~~~-~~~~~~G~s~~----~~~~~~i~~~~~ 196 (416) .....+.. ..+.++ .|+++.+. ...+.+|.|.+ ..+.+.+..... T Consensus 163 ~~~~~~~g~~~~~~ly~~~~~~~~~~~~~~~~w~~~~~~~~~gvPvV~~~n~~~~~~~~G~s~i~e~v~~l~da~~r~~~ 242 (474) T protein:vir:81 163 IIDKDKEGKVLSLALYLDNETVTAQRDKATLKWQVDRDEHVYGVPAQVLPYKPAPKRPFGQSRITKPMMGLQDAGVRELA 242 (474) T ss_pred EEEEcCCCcEEEEEEEeCCcEEEEEEcCccceeeeccCCCCCCcceEEecccccccCcCCccccchhHHHHHHHHHHHHH Confidence 01111110 001111 24444433 22344676643 333444443333 Q ss_pred HHHHHHHHHhccCCcceee-ccCC-cCCH---HHHHHHHHHHHHhh---c-CCceeecCCCceeEeccCChhhHHHHHHH Q lcl|Aclame:pro 197 ATKYNAKLYKNEATPRGIL-KVPA-FLDE---KPKENVRKEWKRVN---K-VENIAIIDYGLEYQSISMPLQEAQFVESM 267 (416) Q Consensus 197 ~~~~~~~~~~n~~~~~~v~-~~~~-~~~~---e~~~~~~~~~~~~~---~-~~~~~vl~~g~~~~~~~~~~~d~~~~e~~ 267 (416) -......++. .|.-++ -.+. ...+ +....++..+.... . ..+-.....+.++-++.... -.-+.+.. T Consensus 243 ~~~~~~e~~a---~pqr~i~G~~~~~~~d~d~~~~~~~~~~~~~i~~~~~d~d~~~~~~~~~~~~q~~~a~-l~~~~~~l 318 (474) T protein:vir:81 243 RREGHMDVFS---YPEFWLLGADESALKNADGTIKSVWEARLGRIKGLPDDADADIPQLARADVKQFPAAS-PDAHWSDI 318 (474) T ss_pred HHHHHHHHhc---chhheeecCChhhcccccccccchhhhhHHHHhcCCCcccccccccccccccccCCCC-hhHHHHHH Confidence 3333333333 343333 2221 1111 11123333322211 1 11111112245555554322 22478889 Q ss_pred HHHHHHHHHHhccchhhcccccCCCcccHHHHHHH--HHHHHHHHHHHHHHHHHHHhhcCchhc----------ccccch Q lcl|Aclame:pro 268 KFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIE--YVRNTLQPWIVNFEQELNVKLFLDHDQ----------KSGHYV 335 (416) Q Consensus 268 ~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~--f~~~~l~P~~~~i~~~l~~~l~~~~~~----------~~~~~~ 335 (416) +.....||..-++|+..||.....|-++.+..... =+...++-..+.+...|.+.+-.-... .....+ T Consensus 319 ~~~~~~~a~~t~iP~~~lG~~~~~np~SaeAi~a~~~~l~~kae~k~~~fg~~l~~~~rla~~i~~~~~~~~~~~~~~~~ 398 (474) T protein:vir:81 319 NGLAKLFAREASLPDTAVAISGLSNPTSAESYDASQYELIAEAEGAVDDFTPALRKAFIRALAMKNKVAIDEIPDEWKSI 398 (474) T ss_pred HHHHHHHHhhhCCCHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccchhhccc Confidence 99999999999999999986543443433332111 111122333333444443322111111 111233 Q ss_pred hhhhhhhhhccHHHHHHHHHHHHhCCC--cCHHHHHHHhCCCCCC---CCCeEeeccCccccccccccccccCCcccCCC Q lcl|Aclame:pro 336 KFNIDSELRGDSKTQAEYLKTLHETGV--LNKDEIRELLERNPIE---NGDKYISSLNYVFLDFLEEYQRLKAGGAMKGG 410 (416) Q Consensus 336 ~f~~~~l~~~d~~~~~~~~~~~~~~g~--~t~NE~R~~~gl~p~~---ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gg 410 (416) +....+....+..+.++++.+++++|. .+..=+++++|+.+.+ ..+....-....+++..- .. ..+++ T Consensus 399 ~v~W~d~~~~s~a~~aDa~~Kl~~a~~~~~~~~~~~~~lg~t~~~i~~~~~~~~~~~~~~~~~~l~-----~~--~~~~~ 471 (474) T protein:vir:81 399 DAKWRDPRYLSKSAQADAGMKQLAAVPWLAETEVGLELIGLTPQQARRAMADKRRVQGRGTLQALI-----DR--SNNGA 471 (474) T ss_pred eeEecCCCccCHHHHHHHHHHHHhcccCCCcHHHHHhhcCCCHHHHHHHHHHHHHHhHHHHHHHHH-----hc--CCCCC Confidence 444456677889999999999999874 3345568888987641 010000000111111100 00 01111 Q ss_pred Ccc Q lcl|Aclame:pro 411 DNK 413 (416) Q Consensus 411 e~~ 413 (416) ..+ T Consensus 472 ~aq 474 (474) T protein:vir:81 472 TAQ 474 (474) T ss_pred CCC Confidence 111 No 200 >protein:vir:94546 Length: 506 # NCBI annotation: minor head protein # Family: family:all:125 # MgeID: mge:1510 # MgeName: phiJL-1 # Cross-refs: genbank:acc:YP_223886;genbank:gi:62327098;genbank:GeneID:5075562 Probab=98.13 E-value=4e-06 Score=50.18 Aligned_cols=385 Identities=12% Similarity=0.030 Sum_probs=176.0 Q ss_pred Ccchh---hhccc-cccccccccchhHHHhhhcCcccc-------ccccccHHHHhccHHHHHHHHHHHHhhccCcceEE Q lcl|Aclame:pro 1 MLLER---MFEKR-SGSSDHEDGFNNILLNMFGGRKTA-------SGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTY 69 (416) Q Consensus 1 m~~~~---~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 69 (416) |-... +.++. ...... ...+..++-+.... ......+..-+..+.....|+..+.-+-.-|+.+. T Consensus 22 l~~~~i~~li~~~~~~~~~r----~~~l~~YY~g~~~~i~~~~~~~~~~~~~~~ki~~n~~~~Iv~~~~~~l~G~p~~~~ 97 (506) T protein:vir:94 22 LTPNKIMKFITHHFNYQRPR----LEMLDDYYQGYNLKILDKQSRRHEDGKADHRATHSFAKYIADFQTSYSVGNPINVK 97 (506) T ss_pred CCHHHHHHHHHHHHHHHHHH----HHHHHHHhcCCCccccccccccccccCCcceeecchHHHHHHHhhhhhcccCceee Confidence 11111 11110 000000 01122222221100 00000011123456677788888888877787754 Q ss_pred eecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC--c Q lcl|Aclame:pro 70 KRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT--G 147 (416) Q Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~--~ 147 (416) ..++. .. ..+..++.. -........+..+++.+|.+|.++..++.|.+ .+..++|..+.+..++.. . T Consensus 98 ~~d~~-----~~-~~l~~~~~~----N~~~~~~~~~~~~~~~~G~a~~~v~~ded~~~-~i~~~~p~~~~~v~dd~~~~~ 166 (506) T protein:vir:94 98 LPDDG-----SN-SGFDTFNKA----NDVDAENYDLFLDMSRYGRAYEYVYRGEDNEE-HLAKLDPLDTFVIYSTDVDPK 166 (506) T ss_pred cCcch-----HH-HHHHHHHhc----cCHhHHHHHHHHHHHhcCeEEEEEEecCCCee-EEEEEcccceEEEecCCCCCc Confidence 32211 11 122223222 23445677788899999999999999888866 566688888888776532 1 Q ss_pred EE----EEEEee-CC-ee------E-Eechhh-------------------------eeeeccCCCCccccccHHHHHHH Q lcl|Aclame:pro 148 ML----WYQTVL-NG-KA------I-ELYDYE-------------------------VLHFKGLSTDGIHGKSPIGVVRE 189 (416) Q Consensus 148 ~~----~~~~~~-~~-~~------~-~~~~~~-------------------------vih~~~~~~~~~~G~s~~~~~~~ 189 (416) .. +|.... .+ .. . .+.... |+++++ .-.|.|.+..... T Consensus 167 ~~~~v~~~~~~~~~~~~~~~~~~~~~~yt~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n----~~~~~sd~e~~~~ 242 (506) T protein:vir:94 167 PIMAVRYHQIELVDDNQVSTINYVPETWTADTYTLYNPTPIMGKMQVDTTKPITTFPVVEFKN----SNFRLGDFENVLP 242 (506) T ss_pred eEEEEEEEeeeeccCCceeEEEEEEEEEeCceEEEeccccCccceeccccccCCccceEEecC----CCCCCCchhhhHH Confidence 11 111100 00 00 0 011111 112211 2236666666666 Q ss_pred HHHHHHHHHHHHHHHHhccCCcceeeccCCcCC---------------------HHHHHHHHHHHHH-----hhcCCcee Q lcl|Aclame:pro 190 HIGAQAAATKYNAKLYKNEATPRGILKVPAFLD---------------------EKPKENVRKEWKR-----VNKVENIA 243 (416) Q Consensus 190 ~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~---------------------~e~~~~~~~~~~~-----~~~~~~~~ 243 (416) .++....+.....+.......|-.+++-..... .+....+.+.+.. ....+.+. T Consensus 243 liDa~d~~~S~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (506) T protein:vir:94 243 LIDLYDAAQSDTANYMTDLNEAMLIIQGDIDTLFEGSDMMNTIDPNDEDAMAKLAKDKLELIKEMKDANMLLLKSGMTVN 322 (506) T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhcCccccccchhccccccccccccccccccchhHHHhhhhhcCeeeeccccccc Confidence 665555544444444443333433333211000 0111111111111 11122222 Q ss_pred ecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHH Q lcl|Aclame:pro 244 IIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPW 311 (416) Q Consensus 244 vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~ 311 (416) ....+.++.-+..+.....+....+.....|+..-++|..-.... .++-|.. .......+...|... T Consensus 323 ~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~-~~n~Sg~Aik~~~~~l~~k~~~k~~~~~~~l~~~ 401 (506) T protein:vir:94 323 GTQTSVDAKYINKTYDVVGSEAYKKRVAGDIHKFSHTPDLTDENF-ASNSSGVAMQYKVLGTVELASTKRRMFERGLYAR 401 (506) T ss_pred CccccccceeeeecCCHHHHHHHHHHHHHHHHHHhCccccccccc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 333455666666666777778888999999999999986332211 1222211 112334455556666 Q ss_pred HHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccc Q lcl|Aclame:pro 312 IVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVF 391 (416) Q Consensus 312 ~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~ 391 (416) ++.|...++.. ..........+.+.++.-+..|..+.++.+.++ .|+++...++++++.-..|.- + +.. T Consensus 402 ~~li~~~~~~~--~~~~~~d~~~i~i~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~lp~v~d~~~-E------~~r 470 (506) T protein:vir:94 402 YQIISDIENSI--HGDWTFDPQELTFTFRDNLPADNISQIKALVQA--GATLPQKYLYQQLPGVTNPQD-I------VDM 470 (506) T ss_pred HHHHHHHHHhc--CCccccccccceEEeCCCCCcCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHH-H------HHH Confidence 66555555431 100001122345556777788999999999888 589999999998755332110 0 000 Q ss_pred ccccc----ccccccCCcccCC--CCccCCC Q lcl|Aclame:pro 392 LDFLE----EYQRLKAGGAMKG--GDNKNEG 416 (416) Q Consensus 392 ~~~~~----~~~~~~~~~~~~g--ge~~~~~ 416 (416) +..-. ...........++ .+.++++ T Consensus 471 i~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (506) T protein:vir:94 471 MKEQSANGDYSFDQNGVISNDGQTNTTATQT 501 (506) T ss_pred HHHHHHHHhhcchhhcCCCcccCcccccccc Confidence 00000 0000000111111 2222222 No 201 >protein:vir:107112 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1571 # MgeName: CNPH82 # Cross-refs: genbank:acc:YP_950601;genbank:gi:119953681;genbank:GeneID:4643121 Probab=98.09 E-value=4.9e-06 Score=49.70 Aligned_cols=376 Identities=11% Similarity=0.018 Sum_probs=172.0 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc---------cccc--ccHHHHhccHHHHHHHHHHHHhhccCcceEE Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA---------SGER--VSESNSLVQPDIFACVNVLSDDIAKLPIHTY 69 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~--~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 69 (416) =++.++.++....-. -...+..++.+.... .... .....-+.++....+|+..+.-+-+-|+.+. T Consensus 29 ~~i~~~i~~~~~~~~----r~~~~~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~ivd~~~~yl~g~p~~~~ 104 (478) T protein:vir:10 29 EMILRLVREHKENID----NITMGERYYNHHPDILDAPFKRDVNGDYDETKPDWRMYTNYHQNLVDQKVAYAVANPVTFG 104 (478) T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHhcccccccccchhhhcccccccccccceeccchHHHHHHHHhhhhcccCceee Confidence 011111111110000 001112222211100 0000 0000112356677889998888888888754 Q ss_pred eecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC--Cc Q lcl|Aclame:pro 70 KRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT--TG 147 (416) Q Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~--~~ 147 (416) ..+ +. ....+...+ . | ........+..+.+.+|.+|..+..+..|++ .+..++|..+.+..++. +. T Consensus 105 ~~~-~~----~~~~l~~~~-~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~~~~~~p~~~~~v~d~~~~~~ 172 (478) T protein:vir:10 105 VDN-DK----ALKQIQHTL-N--H---KWDDKLVDILTAASNKGIEWVQPYVDEEGEF-KTFRVPAEQAVPIWTNKERDE 172 (478) T ss_pred cCC-hH----HHHHHHHHH-h--c---cHHHHHHHHHHHHhhCCeEEEEEEecCCCce-EEEEEcccceEEEEcCCCCCc Confidence 322 11 111122222 1 2 4556777778899999999999988888876 57778888888776542 22 Q ss_pred EEE--EEEeeCC-eeE-EechhheeeeccC--------------------------C---------CCccccccHHHHHH Q lcl|Aclame:pro 148 MLW--YQTVLNG-KAI-ELYDYEVLHFKGL--------------------------S---------TDGIHGKSPIGVVR 188 (416) Q Consensus 148 ~~~--~~~~~~~-~~~-~~~~~~vih~~~~--------------------------~---------~~~~~G~s~~~~~~ 188 (416) ..+ +.+...+ ..+ .+.++.|.+.+.. . .+...|.|.++.+. T Consensus 173 ~~~~ir~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~ 252 (478) T protein:vir:10 173 LQAFIRVYELDGAERVEYWTKDDVTFYELKEGQLIPDFYRSEDHIQPHYYQGNKLMSWGRVPFIPFKNNPQEVSDLFMYK 252 (478) T ss_pred eEEEEEEEeeeCceEEEEEeCCcEEEEEecCCeeeccccccccccccceecccccccCCcceEEEeccCCCCCCcHHHHH Confidence 211 1111111 111 1122333222110 0 01235788888877 Q ss_pred HHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeec--CCCceeEeccCChhhHHHHHH Q lcl|Aclame:pro 189 EHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAII--DYGLEYQSISMPLQEAQFVES 266 (416) Q Consensus 189 ~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl--~~g~~~~~~~~~~~d~~~~e~ 266 (416) ..++....+.....+.+...+.|-.+++--...+ .......+ +..+++.+ +.|.++..+........+.+. T Consensus 253 ~liDa~~~~~S~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 325 (478) T protein:vir:10 253 TIIDALDKRLSDTQNTFDESVELIYILKGYEGED---MKDFMHNL----KYYKAISVAGESGSGVDTIKVEVPIDSVKEY 325 (478) T ss_pred HHHHHHHHHHHHHHHHHHHhhCcceeeecCCccc---ccchhhhh----hhCceeEecCCCCCcceEEeecCCHHHHHHH Confidence 7777777666666666666666755554322111 11111111 11233333 234444445555556677788 Q ss_pred HHHHHHHHHHHhccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccc Q lcl|Aclame:pro 267 MKFNKAQISMIYKVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHY 334 (416) Q Consensus 267 ~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~ 334 (416) .+...+.|+..-++|..-.... .++-|... ......+..++.-+++.|...+.. ... ... T Consensus 326 ~~~l~~~I~~~s~~p~~~~~~~-~~n~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~-----~~d--~~~ 397 (478) T protein:vir:10 326 TKMLRDYIIEFGQGVDFQQDKF-GNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYRL-----DVR--VQD 397 (478) T ss_pred HHHHHHHHHHHhCCcCcCcccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----Ccc--ccc Confidence 8888999999999985332211 12222110 112223333333333333332221 111 123 Q ss_pred hhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCcccccccccccc-c--cCCc--cc Q lcl|Aclame:pro 335 VKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEYQR-L--KAGG--AM 407 (416) Q Consensus 335 ~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~~~-~--~~~~--~~ 407 (416) +.+.++.-+..+..+.++.+.++ +|+++.-.+.++++.-..+. .+.+- .+.....++ . ..+. .. T Consensus 398 i~i~f~~~~p~~~~e~~~~~~~~--~g~iS~et~i~~~~~v~d~~~E~~ri~-------~E~~~~~~~~~~~~~~~~d~~ 468 (478) T protein:vir:10 398 IEITFNFNVMVNELENSQIAMNS--TGLLSKETILGNHSWVQDPVAEMERIE-------QENIELNQQLPDIEEGLNDEQ 468 (478) T ss_pred ceEEeCCCCCCCHHHHHHHHHHH--hCCCChHHHHHhCCCCCCHHHHHHHHH-------HHHHHHHHhccccCCCCcccc Confidence 44445566777888888888776 68999877887775422111 00000 000000000 0 0000 01 Q ss_pred CCCCccCCC Q lcl|Aclame:pro 408 KGGDNKNEG 416 (416) Q Consensus 408 ~gge~~~~~ 416 (416) +..++++++ T Consensus 469 ~~~~~d~~~ 477 (478) T protein:vir:10 469 QRQSEDNQS 477 (478) T ss_pred cccCcCCCC Confidence 111111111 No 202 >protein:vir:99781 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1497 # MgeName: phiETA2 # Cross-refs: genbank:acc:YP_001004303;genbank:gi:122891757;genbank:GeneID:4712336 Probab=98.07 E-value=5.5e-06 Score=49.44 Aligned_cols=397 Identities=11% Similarity=0.014 Sum_probs=182.4 Q ss_pred Cc---chhhhccccccccccccchhHHHhhhcCcccc------ccccccHHHHhccHHHHHHHHHHHHhhccCcceEEee Q lcl|Aclame:pro 1 ML---LERMFEKRSGSSDHEDGFNNILLNMFGGRKTA------SGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKR 71 (416) Q Consensus 1 m~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~ 71 (416) +- +.++.++......+ -...+..++.+.... .........-+........|+..+.-+.+-|+.+... T Consensus 40 ~~~~~i~~~i~~~~~~~~~---r~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~ 116 (511) T protein:vir:99 40 QNVNEVSKYIEHHMDYQRP---RLKVLSDYYEGKTKNLVELTRRKEEYMADNRVAHDYASYISDFINGYFLGNPIQYQDD 116 (511) T ss_pred ccHHHHHHHHHHHHHhhHH---HHHHHHHHhcccCccccccCcccccccCcceeecchHHHHHHHHHhhhcccCceeecC Confidence 11 11121111000000 011122222221100 0000000111224556677788888887788875322 Q ss_pred cCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCC--cEE Q lcl|Aclame:pro 72 TDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTT--GML 149 (416) Q Consensus 72 ~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~--~~~ 149 (416) + +. .. ..+..++.. | ........+..+++.+|.+|.++.++++|.+ .+..++|..+-+..++.. ... T Consensus 117 d-~~----~~-~~l~~~~~~-n---~~~~~~~~~~~~~~i~G~a~~~vy~ded~~~-~i~~~~p~~~~~vyd~~~~~~~~ 185 (511) T protein:vir:99 117 D-KD----VL-EAIEAFNDL-N---DVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNTIERNSI 185 (511) T ss_pred c-hH----HH-HHHHHHHhh-c---CHhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCCCCCceE Confidence 1 11 11 122223222 1 3456777888999999999999999988865 577788888888777542 221 Q ss_pred ----EEEEe-eC---Ce---e-EEechhheeeeccCC--------------------------CCccccccHHHHHHHHH Q lcl|Aclame:pro 150 ----WYQTV-LN---GK---A-IELYDYEVLHFKGLS--------------------------TDGIHGKSPIGVVREHI 191 (416) Q Consensus 150 ----~~~~~-~~---~~---~-~~~~~~~vih~~~~~--------------------------~~~~~G~s~~~~~~~~i 191 (416) +|... .. .. . ..+.++.+++++... .+...|.|.++.+...+ T Consensus 186 ~~vr~~~~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~li 265 (511) T protein:vir:99 186 AGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLI 265 (511) T ss_pred EEEEEEEeeecccCccceEEEEEEEeCCcEEEEEecCCccccccccccccccCCCCccceEEecCCCCCCCchhhhHHHH Confidence 11111 00 00 0 122333343332110 01235788888888888 Q ss_pred HHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHH---H-H-hhcCCceeecCCCceeEeccCChhhHHHHHH Q lcl|Aclame:pro 192 GAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEW---K-R-VNKVENIAIIDYGLEYQSISMPLQEAQFVES 266 (416) Q Consensus 192 ~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~---~-~-~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~ 266 (416) +....+.....+.+...+.|-.+++-....+++.....++.- . . ....+...-..+|.++..+........+... T Consensus 266 Da~d~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~e~~ 345 (511) T protein:vir:99 266 DLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAY 345 (511) T ss_pred HHHHHHHHHHHHHHHHhhchhhhhccCcccCchhhcccccccceecccccccccccccCCCCcceeEEeecCCHHHHHHH Confidence 777766666666666666666666554444444433332211 0 0 1111122233456666666666666677788 Q ss_pred HHHHHHHHHHHhccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccc Q lcl|Aclame:pro 267 MKFNKAQISMIYKVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHY 334 (416) Q Consensus 267 ~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~ 334 (416) .+...+.|+..-++|..-.+... |+-|... ......+..+|.-.++.|...+...--... ...-.. T Consensus 346 ~~~L~~~I~~~s~~P~~~~~~~~-gn~Sg~Alk~~~~~l~~ka~~k~~~~~~~l~~~~~li~~~~~~~~~~~~-~~~~~~ 423 (511) T protein:vir:99 346 KDRLNSDIHMFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDV-SKDFNT 423 (511) T ss_pred HHHHHHHHHHHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-cccccc Confidence 88889999999999875443221 2222110 111222333333333333333332110000 001112 Q ss_pred hhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEe------eccCccccccccccccccCCcc Q lcl|Aclame:pro 335 VKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYI------SSLNYVFLDFLEEYQRLKAGGA 406 (416) Q Consensus 335 ~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~------~~~n~~~~~~~~~~~~~~~~~~ 406 (416) +++.+..-+..+..+.++.+.++ .|+++.--+.++++.-+.|. .+.+- .+............... .... T Consensus 424 i~i~f~~~~p~n~~e~~~~~~kl--~GiiS~et~l~~l~~v~D~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~-~~~~ 500 (511) T protein:vir:99 424 VRYVYNRNLPKSLIEELKAYIDS--GGKISQTTLMSLFSFFQDPELEVKKIEEDEKESIKKAQKNMYQDPRNIND-DEQD 500 (511) T ss_pred ceEEeCCCCCcCHHHHHHHHHHH--hccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhhcccccCCCCCC-CCCC Confidence 45555566778899999998888 48999988888875432211 00000 00000000000000000 0000 Q ss_pred cCCCCccCCC Q lcl|Aclame:pro 407 MKGGDNKNEG 416 (416) Q Consensus 407 ~~gge~~~~~ 416 (416) .+..++++++ T Consensus 501 ~~~~~~~d~~ 510 (511) T protein:vir:99 501 DSTKDSIDKK 510 (511) T ss_pred CCCcCccccc Confidence 0001111111 No 203 >protein:vir:106571 Length: 499 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1598 # MgeName: Lj965 # Cross-refs: genbank:acc:NP_958580;genbank:gi:41179240;genbank:GeneID:2717107 Probab=98.02 E-value=6.8e-06 Score=48.92 Aligned_cols=386 Identities=9% Similarity=0.039 Sum_probs=181.2 Q ss_pred Cc---chhhhccccccccccccchhHHHhhhcCccc-----cccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeec Q lcl|Aclame:pro 1 ML---LERMFEKRSGSSDHEDGFNNILLNMFGGRKT-----ASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRT 72 (416) Q Consensus 1 m~---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~ 72 (416) |= +.++..+....... ...+..++.+... ..... ....-+.......+|+..+.-+-+-|+.+...+ T Consensus 16 ~~~~~i~~~i~~~~~~~~~----~~~l~~Yy~g~~~i~~~~~~~~~-~~~~ki~~n~~~~Iv~~~~~~l~g~p~~~~~~~ 90 (499) T protein:vir:10 16 PNIEAINYAIRELQNRKKR----LDKLSDYYNGKQEIEKHEFDNAT-VEAANVMVNHAKYITDMNVGFMTGNPVKYVAEK 90 (499) T ss_pred CCHHHHHHHHHHHHHHHHH----HHHHHHHhccccchhcCCcCcCC-CCcceeecchHHHHHHHHhhhhcccCceeecCC Confidence 00 11111111100000 0112222222110 00000 001112245566788888888877787654322 Q ss_pred CCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcE----------------EEEEeeccc Q lcl|Aclame:pro 73 DGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYP----------------EALFPLRPD 136 (416) Q Consensus 73 ~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~----------------~~l~~l~p~ 136 (416) +. . ...+...+ .. | ....+...+....+.+|.+|.++..+..|.+ ..+..++|. T Consensus 91 ~~-~----~~~l~~~~-~~-n---~~~~~~~~~~~~~~~~G~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~p~ 160 (499) T protein:vir:10 91 GK-N----IDDILEVF-NQ-I---DIHKHDIELEKDLSVFGYGYELLYLKKTDPISVRDELGNEKLTPNTELKIEVIDPR 160 (499) T ss_pred hh-H----HHHHHHHH-hh-c---CHhHHHHHHHHHHHhcCceEEEEEecccccccccccccccccccccceEEEEEccc Confidence 11 1 11222222 22 1 3446788888999999999999988887753 346667777 Q ss_pred eEEEEEcCCCcE------EEEEEee-C-Cee---E-EechhheeeeccC----------------C----------CCcc Q lcl|Aclame:pro 137 YTNAYVHPTTGM------LWYQTVL-N-GKA---I-ELYDYEVLHFKGL----------------S----------TDGI 178 (416) Q Consensus 137 ~v~~~~~~~~~~------~~~~~~~-~-~~~---~-~~~~~~vih~~~~----------------~----------~~~~ 178 (416) .+-+..+..... .+|.... . +.. + .+.++.+++++.. + .+.. T Consensus 161 ~~~~v~~d~~~~~~~~~i~~~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~ 240 (499) T protein:vir:10 161 ATVVVCDDTVEHDPLFAVFTQEKKDLEGNTNGYSITVYMPQRIVEYRTKTTMEVSANDPIVYDGENLFGAVPIIEFRNNE 240 (499) T ss_pred ceEEEecCCCCcceEEEEEEEEEeecCCCceEEEEEEEeCCeEEEEEecCCccccCcceecccccCCCCccceEEecCCC Confidence 766665543321 1111111 1 111 1 1222333332100 0 0123 Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcC-CHHHHHHHHHHHHHhhcCCceee--cCCCceeEecc Q lcl|Aclame:pro 179 HGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFL-DEKPKENVRKEWKRVNKVENIAI--IDYGLEYQSIS 255 (416) Q Consensus 179 ~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~v--l~~g~~~~~~~ 255 (416) .|.|.++.+...++..........+.+...+.|-.+++-.... +.+.... ...+.+.. .+++.+++.+. T Consensus 241 ~~~~d~e~v~~liD~~~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~~~~~--------~~~~~~~~~~~~~~~d~~~l~ 312 (499) T protein:vir:10 241 ERQGDFEQLISLIDAYNLLQTDRISDKEAFVDALLVTFGFGLGDDKDDIQR--------LKRGAIEAPPREEGADIEWLT 312 (499) T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCccccccchhhh--------hhhcceeccCCCCCCcceEEe Confidence 4777788787888777776666666777777777776642211 1111111 12223333 34566666666 Q ss_pred CChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 256 MPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKL 323 (416) Q Consensus 256 ~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l 323 (416) .......+.+..+...+.|+..-++|..-.... .|+-|.. .......+..++.-+++.+...++.+- T Consensus 313 ~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~-~gn~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~ 391 (499) T protein:vir:10 313 KSFDETQVNLLSQSIENDIHKISYVPNMNDEKF-MGNVSGEAMKFKLFGLENLLSIKQRYFFDGLRRRLKLIQTIVNIKG 391 (499) T ss_pred ccCCHHHHHHHHHHHHHHHHHHhCcccCCchhh-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC Confidence 655556667777888888888888874222111 1221111 112233444445555555554443221 Q ss_pred cCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCe--------------Eeecc Q lcl|Aclame:pro 324 FLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDK--------------YISSL 387 (416) Q Consensus 324 ~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~--------------~~~~~ 387 (416) . ......+.+.+..-+..+..+.++.+.++ .|+++.--++++++.-..+. ... .+... T Consensus 392 -~---~~d~~~i~i~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~l~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~~ 465 (499) T protein:vir:10 392 -A---NDDASGCKISLVANIPSNLSDVVNNVKNA--DGIIPRKYTYSWLPDVDNPQDVIDEMNQQDAETIKKNQEALRGQ 465 (499) T ss_pred -C---ccccccceEEeCCCCCCCHHHHHHHHHHH--hccCChHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhccC Confidence 0 01112344445566678899999999988 68899988888876532211 111 11111 Q ss_pred CccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 388 NYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 388 n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +..+.+..+..+..+.++..++.+++.+| T Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (499) T protein:vir:10 466 DPDRLELEDKQDDSSENDKEAGSNHNQSH 494 (499) T ss_pred CCCCCCCCCCCcccCCCCCCCccccccCC Confidence 11111111111222222222223333333 No 204 >protein:vir:96839 Length: 474 # NCBI annotation: ORF008 # Family: family:all:125 # MgeID: mge:1642 # MgeName: EW # Cross-refs: genbank:acc:YP_240152;genbank:gi:66395815;genbank:GeneID:5133180 Probab=97.99 E-value=7.9e-06 Score=48.56 Aligned_cols=375 Identities=9% Similarity=-0.002 Sum_probs=174.6 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccc--------cccccc---cHHHHhccHHHHHHHHHHHHhhccCcceEE Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKT--------ASGERV---SESNSLVQPDIFACVNVLSDDIAKLPIHTY 69 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~---~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 69 (416) =++.++..+..... .-...+..++.+... ...... ....=+.++....+|+..+.-+-.-|+.+. T Consensus 29 ~~i~~~i~~~~~~~----~~~~~~~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~~~l~g~p~~~~ 104 (474) T protein:vir:96 29 EMIIRLINDHKPKI----DDITVGERYYNHDPDVLRLAPKLDNKGEIDPLKPDWRMFTNYHQNLVDQKVAYAVANPVTFS 104 (474) T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHhccCCcchhccchhcccccccccccchhcccchHHHHHHhhhhhhcccCceee Confidence 00111111100000 000111112111100 000000 011112356677788888888888887753 Q ss_pred eecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC--Cc Q lcl|Aclame:pro 70 KRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT--TG 147 (416) Q Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~--~~ 147 (416) ..++ . ....+...+ . | ........+..++..+|.+|.++..+..|++ .+..++|..+-+..++. +. T Consensus 105 ~~d~-~----~~~~l~~~~-~--n---~~~~~~~~~~~~~~~~G~~~~~~y~d~~~~~-~i~~~~p~~~~~v~d~~~~~~ 172 (474) T protein:vir:96 105 SDDD-K----SLKTIQEVL-N--H---KWDDKLVDILTAASNKGIEWLQPYIDENGEF-KTFRVPAEQAIPIWTNKERDT 172 (474) T ss_pred cCch-H----HHHHHHHHH-h--c---CHHHHHHHHHHHHHhcCeeEEEEEecCCCce-EEEEEcccceEEEEcCCCCCc Confidence 3221 1 111222222 2 2 3345566677888999999999999888876 48888999988887653 22 Q ss_pred EE--EEEEeeCC-eeE-Eechhheeeecc-------------------------CC----------CCccccccHHHHHH Q lcl|Aclame:pro 148 ML--WYQTVLNG-KAI-ELYDYEVLHFKG-------------------------LS----------TDGIHGKSPIGVVR 188 (416) Q Consensus 148 ~~--~~~~~~~~-~~~-~~~~~~vih~~~-------------------------~~----------~~~~~G~s~~~~~~ 188 (416) .. .+.+...+ ..+ .+.+..+.++.. .. .+...|.|.++... T Consensus 173 ~~~~vr~~~~~~~~~~~~yt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~nn~~g~sd~e~v~ 252 (474) T protein:vir:96 173 LKAFIRYYRLDGAERVEYWTDSDVTYYEYQDGILIPDYYHGEEHIQSHYYVGNKRVSWGRVPFIPFKNNPQEMSDLFMYK 252 (474) T ss_pred eEEEEEEEeecCceEEEEEeCCeEEEEEecCCceeeccccccccccccccccccccCCCceeEEEeccCCCCCCcHHHHH Confidence 21 11111111 111 111222222110 00 01235788888888 Q ss_pred HHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecC-CCceeEeccCChhhHHHHHHH Q lcl|Aclame:pro 189 EHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIID-YGLEYQSISMPLQEAQFVESM 267 (416) Q Consensus 189 ~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~-~g~~~~~~~~~~~d~~~~e~~ 267 (416) ..++....+.....+.+...+.|-.+++--...+ .+. +.......+++.++ +|.++..+........+.+.. T Consensus 253 ~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~---~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~ 325 (474) T protein:vir:96 253 TIIDAMDKRLSDTQNTFDESTELIYILKGYEGQD---LDE----FMRNLKYYKAINVDGDGSGVDTIQIEVPVQSSKEYL 325 (474) T ss_pred HHHHHHHHHHHHHHHHHHHhccceeeeecCCccc---ccc----hhhhhhcCceEEecCCCCceeEEeecCChHHHHHHH Confidence 8888777777777777777777766665322111 111 11122234566565 456666666555666777888 Q ss_pred HHHHHHHHHHhccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccch Q lcl|Aclame:pro 268 KFNKAQISMIYKVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYV 335 (416) Q Consensus 268 ~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~ 335 (416) +...+.|+..-++|..-.... .++-|... ......+...|..+++.|...+.. ...... + T Consensus 326 ~~l~~~i~~~s~~p~~~~~~~-~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~~i~~~~~~-----~~~~~~--i 397 (474) T protein:vir:96 326 DMLRDYVIEFGQGVDFQQDKF-GNSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYKL-----NIKVQD--V 397 (474) T ss_pred HHHHHHHHHHhCCcccccccc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----Ccccce--e Confidence 899999999999986443221 12211110 112223333444444444333221 111112 3 Q ss_pred hhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccc--cccccc--cccCCcccCCCC Q lcl|Aclame:pro 336 KFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLD--FLEEYQ--RLKAGGAMKGGD 411 (416) Q Consensus 336 ~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~--~~~~~~--~~~~~~~~~gge 411 (416) .+.++.-+..+..+.++ .+.++|+++.-.++++++.-..|. .- ...+. .....+ ....++..++.+ T Consensus 398 ~i~f~~~~p~~~~e~~~---~~~~ag~iS~et~~~~~~~v~d~~--~E-----~~ri~~E~~e~~~~~~~~~~~~~~~~~ 467 (474) T protein:vir:96 398 EITFNFNVMVNELEQSQ---IGVQSQYLSKETVVTNHPWVDDPV--AE-----LERIEQDNIDFNKQLPPLEGDANGRAQ 467 (474) T ss_pred eEEeccCCCcCHHHHHH---HHHhcCCCchHHHHHhCCCCCCHH--HH-----HHHHHHHHHHHHhcccccccccccccC Confidence 33334445566655554 456689999999999875432211 00 00000 000000 000111111111 Q ss_pred ccCCC Q lcl|Aclame:pro 412 NKNEG 416 (416) Q Consensus 412 ~~~~~ 416 (416) ++++- T Consensus 468 d~~~e 472 (474) T protein:vir:96 468 DNESE 472 (474) T ss_pred CCccc Confidence 11111 No 205 >protein:vir:733 Length: 453 # NCBI annotation: minor structural protein 1 # Family: family:all:125 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108710;genbank:gi:13487832;genbank:GeneID:920851 Probab=97.98 E-value=8.2e-06 Score=48.46 Aligned_cols=389 Identities=11% Similarity=0.019 Sum_probs=180.6 Q ss_pred Ccchhhhcccc--cccc-----------ccccchhHHHhhhcCcccc--cccccc--HHHHhccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MLLERMFEKRS--GSSD-----------HEDGFNNILLNMFGGRKTA--SGERVS--ESNSLVQPDIFACVNVLSDDIAK 63 (416) Q Consensus 1 m~~~~~f~~~~--~~~~-----------~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~a~~~~~v~~~i~~ia~~ia~ 63 (416) |.=-++|--.. ..+. ....-...+..+..+.... ...... ...-+..+.....|+..+.-+-. T Consensus 3 ~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~r~~~~~~yy~g~~~i~~~~~~~~~~~~~ki~~n~~~~ivd~~~~~l~g 82 (453) T protein:vir:73 3 LKPIKLMTYSRDEEITDKVVNDFMKKHQEEVERYEYLGNMYKGIMEISSQKAKDSWKPDNRLTNNFAKYIVDTFVGYFNG 82 (453) T ss_pred cccceeeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcCCCCCccCccceeecchHHHHHHHhhhhhcc Confidence 11111111000 0000 0000000111111111000 000000 01112345666777877777777 Q ss_pred CcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEc Q lcl|Aclame:pro 64 LPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVH 143 (416) Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~ 143 (416) -|+.+...+ +. .. ..+..++.. -........+..+.+.+|.+|.++.++++|.+ .+..++|..+.+..+ T Consensus 83 ~~~~~~~~d-~~----~~-~~l~~~~~~----n~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~-~i~~~~p~~~~~v~d 151 (453) T protein:vir:73 83 IPIKKTHDD-KS----VL-EAMQLFDNL----NDMEDEESELAKIACVYGRAYELMYQNESTES-EVIYCSPLNVFMVYD 151 (453) T ss_pred cCceeecCC-hH----HH-HHHHHHHHh----cChhHHHHHHHHHHHhcCeEEEEEEeCCCCce-EEEEEcccceEEEEe Confidence 776643221 11 11 112222222 24456677788999999999999999988877 466678888877776 Q ss_pred CCCcE-E----EEEEeeCCee-E-EechhheeeeccCC---------------------CCccccccHHHHHHHHHHHHH Q lcl|Aclame:pro 144 PTTGM-L----WYQTVLNGKA-I-ELYDYEVLHFKGLS---------------------TDGIHGKSPIGVVREHIGAQA 195 (416) Q Consensus 144 ~~~~~-~----~~~~~~~~~~-~-~~~~~~vih~~~~~---------------------~~~~~G~s~~~~~~~~i~~~~ 195 (416) +.... . .|.....+.. . .+..+.+++++... .+...|.|.++.+...++... T Consensus 152 d~~~~~~~~~i~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~s~~~~v~~liDa~~ 231 (453) T protein:vir:73 152 DSIKQKPLFAVYYGFDEEGNLSGTVYTLLETISITGKAGEVKFGESTYNVYSDLPIVEYNFNEERQSIFEPVHSLINSYN 231 (453) T ss_pred CCCCceeEEEEEEEEecCceEEEEEEeCCeEEEEEecCCceEEccceeccCCceeEEEecCCCCCCcchhhHHHHHHHHH Confidence 54321 1 1111111111 1 12223333322100 112357888888888887776 Q ss_pred HHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHH-HHH--hhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHH Q lcl|Aclame:pro 196 AATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKE-WKR--VNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKA 272 (416) Q Consensus 196 ~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~-~~~--~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~ 272 (416) .+.....+.+...+.|..+++-- ...++..+.++.. ... ....+.....+.+.++..+.....+..+....+...+ T Consensus 232 ~~~S~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~l~~ 310 (453) T protein:vir:73 232 KVTSEKANDVEYFSDQYLVFLGA-EVDEEDAKNIKDNRLINFFDKNSNGQGTNAAKVDVKFLDKPDSDVQTENLLNRLER 310 (453) T ss_pred HHHHHHHHHHHHhccceeeeecC-CCCchhhhcccccccccccccccccccccccCceeEEeeecCCHHHHHHHHHHHHH Confidence 66666666666777777666532 3334444443321 111 1122223344455556555555566667777888899 Q ss_pred HHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhh Q lcl|Aclame:pro 273 QISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNID 340 (416) Q Consensus 273 ~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~ 340 (416) .|+..-++|..-.... |+-|.. .+.....+...+..+++.+...++..-. .. ....+++.+. T Consensus 311 ~I~~~s~~p~~~~~~~--gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~-~~---~~~~i~v~f~ 384 (453) T protein:vir:73 311 SIFQFTMAANISDENF--GNSSGVALAYKLQAMSNLALSFQRKFQSALNRRYSLWSSLSTNASN-KD---AWKDIEYTFT 384 (453) T ss_pred HHHHHhCCcccCcccc--cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-cc---ccccceEEeC Confidence 9999988875322211 221110 1112233344444444444433332111 11 1123455556 Q ss_pred hhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 341 SELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 341 ~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) .-+..+..+.++.+.+++ |+++.--+.++++.-+.|.. + ...+..-.+.+...+.....-...+..| T Consensus 385 ~~~p~~~~~~a~~~~k~~--giis~et~~~~~~~~~d~~~-E------~~ri~~E~~~~~~~~~~~~~~~~~~~~~ 451 (453) T protein:vir:73 385 RNEPKDIKEQAETANILK--GITSEETALSVISVIPDVQA-E------MEKIKKKKLLQLSLTRTSNLVRMKQMRG 451 (453) T ss_pred CCCCCCHHHHHHHHHHHh--ccCcHHHHHHhCCCCCCHHH-H------HHHHHHHHHHHHHHHHhccCCcchhhhc Confidence 677889999999999885 88998778777765332110 0 0001000000000000011112223333 No 206 >protein:vir:3028 Length: 500 # NCBI annotation: minor capsid protein # Family: family:all:898 # MgeID: mge:61 # MgeName: PhiNIH1.1 # Cross-refs: genbank:acc:NP_438141;genbank:gi:16271804;genbank:GeneID:929241 Probab=97.94 E-value=1e-05 Score=47.99 Aligned_cols=382 Identities=8% Similarity=0.023 Sum_probs=180.5 Q ss_pred Cc----chhhhcc-------cccc--c-cccccch-------hHHHhhhcCccc-ccc----ccccHHHHhccHHHHHHH Q lcl|Aclame:pro 1 ML----LERMFEK-------RSGS--S-DHEDGFN-------NILLNMFGGRKT-ASG----ERVSESNSLVQPDIFACV 54 (416) Q Consensus 1 m~----~~~~f~~-------~~~~--~-~~~~~~~-------~~~~~~~~~~~~-~~~----~~~~~~~a~~~~~v~~~i 54 (416) |. ++++|++ ++.. + ...-..+ ..+..++.+-.. ... .....+...+......++ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (500) T protein:vir:30 1 MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAA 80 (500) T ss_pred CchHHHHHHHHHHHHHHhhcchhhhhhccccccCCHHHHHHHHHHHHHhcCCCCCcccccCCCCcccCceeecchHHHHH Confidence 22 2222221 0100 0 0000011 111222222111 000 001112222334445566 Q ss_pred HHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeec Q lcl|Aclame:pro 55 NVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLR 134 (416) Q Consensus 55 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~ 134 (416) +.+|+-+..-|..+.-.+ + .....+..++. .-.....+...+...+..|.+++.+..+. +.+ .+..++ T Consensus 81 ~~~A~lv~~e~~~i~~~d-~-----~~~~~l~~il~----~n~f~~~~~~~~e~a~a~G~~~~k~~~d~-~~~-~I~~v~ 148 (500) T protein:vir:30 81 KKIASLVFNEQAEIKVDD-D-----AANEFISETLK----NDRFNKNFERYLESCLALGGLAMRPYVDG-DKV-RVAFVQ 148 (500) T ss_pred HHHhhhhcCCcceEecCC-h-----HHHHHHHHHHh----hccHHHHHHHHHHHHhhcCCEEEEEEEeC-Cce-EEEEEc Confidence 666666655444432211 1 00111111211 11234556666777788899988887764 433 355667 Q ss_pred cceEEEEEcCCCcE-----------------EEEE----Ee-eCCe--eEE---e------------c--------hh-- Q lcl|Aclame:pro 135 PDYTNAYVHPTTGM-----------------LWYQ----TV-LNGK--AIE---L------------Y--------DY-- 165 (416) Q Consensus 135 p~~v~~~~~~~~~~-----------------~~~~----~~-~~~~--~~~---~------------~--------~~-- 165 (416) |..+-+...+.++. .+|. +. .++. .++ + + +. T Consensus 149 ad~~~P~~~d~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~l~~~~ 228 (500) T protein:vir:30 149 APVFLPLQSNTQDVSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEA 228 (500) T ss_pred CCeeEEEEEcCCCeEEEEEEEEEeeeecCCceEEEEEEEEEEeCCceeEEEEEEEecccccccCcccccccccCCcCcce Confidence 76666543322211 1110 00 0000 000 0 0 00 Q ss_pred --------heeeeccCCCC-----ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceee-----ccCCcC-CHHHH Q lcl|Aclame:pro 166 --------EVLHFKGLSTD-----GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGIL-----KVPAFL-DEKPK 226 (416) Q Consensus 166 --------~vih~~~~~~~-----~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~-----~~~~~~-~~e~~ 226 (416) -+.|++.+..+ ...|+|.+..+...++...........-++.|. ...++ ...... +-+.. T Consensus 229 ~~~~~~~p~f~~~~~~~~N~~~~~sp~G~S~~~~~~~lid~lD~~~s~~~~e~~~g~-~~i~v~~~~l~~~~~~~~g~~~ 307 (500) T protein:vir:30 229 KVTDVTRPIFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQ-RRVAVPESLTALTVRTTDGDVV 307 (500) T ss_pred EeccCCCccEEEecCCccccccCCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhCc-ceeeechHHhcccCCCCCcccc Confidence 12344443222 346999999999999998888888888887654 33333 211110 00000 Q ss_pred HHHHHHHHHhhcCCce-ee----cCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH-- Q lcl|Aclame:pro 227 ENVRKEWKRVNKVENI-AI----IDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ-- 299 (416) Q Consensus 227 ~~~~~~~~~~~~~~~~-~v----l~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~-- 299 (416) .. ..|. . ...+ .. .+++..++.++....+-++.+..+...++|+...|+++..++...++.. ++.+. T Consensus 308 ~~--~~~d-~--~~~~~~~~~~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~gls~~~~~~~~~g~~-TAtei~s 381 (500) T protein:vir:30 308 PR--PRFE-S--DQNVYIRMGGRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMK-TATEIVS 381 (500) T ss_pred CC--cccC-C--CcceEEEcCCCCCcCcceeEeccccChHHHHHHHHHHHHHHHHHhCCCccccccCcCccc-cHHHHHH Confidence 00 0010 0 0000 01 1234457777777788899999999999999999999999987766542 23332 Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHH Q lcl|Aclame:pro 300 -----------SIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEI 368 (416) Q Consensus 300 -----------~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~ 368 (416) ....++.+|..++..|....+..-+..........+.+++++-+..|.++.++...+++.+|+|+.-++ T Consensus 382 ~~~~~~~t~~~~~~~~~~al~~lv~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~v~aGi~s~~~~ 461 (500) T protein:vir:30 382 ENSDTYQMRNSIVALVEQSLKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMA 461 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHH Confidence 223334444444444443322110111112234567777888889999999999999999999999998 Q ss_pred HHHh-CCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 369 RELL-ERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 369 R~~~-gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +.++ |++.- ...+.+- +.++......+..++++ T Consensus 462 i~~~~g~~ee-ea~~~l~--------------~i~~E~~~~~~~~~~~~ 495 (500) T protein:vir:30 462 IQKVLNVTEE-KAQEIAA--------------EINTGIVDEINQQRTDT 495 (500) T ss_pred HHhcCCCCHH-HHHHHHH--------------HHHHhccccCCCCCccc Confidence 8654 55321 1111110 00000001112222222 No 207 >protein:vir:9815 Length: 500 # NCBI annotation: putative minor capsid protein # Family: family:all:898 # MgeID: mge:176 # MgeName: 315.4 # Cross-refs: genbank:acc:NP_795577;genbank:gi:28876344;genbank:GeneID:1257866 Probab=97.94 E-value=1e-05 Score=47.99 Aligned_cols=382 Identities=8% Similarity=0.023 Sum_probs=180.5 Q ss_pred Cc----chhhhcc-------cccc--c-cccccch-------hHHHhhhcCccc-ccc----ccccHHHHhccHHHHHHH Q lcl|Aclame:pro 1 ML----LERMFEK-------RSGS--S-DHEDGFN-------NILLNMFGGRKT-ASG----ERVSESNSLVQPDIFACV 54 (416) Q Consensus 1 m~----~~~~f~~-------~~~~--~-~~~~~~~-------~~~~~~~~~~~~-~~~----~~~~~~~a~~~~~v~~~i 54 (416) |. ++++|++ ++.. + ...-..+ ..+..++.+-.. ... .....+...+......++ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (500) T protein:vir:98 1 MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAA 80 (500) T ss_pred CchHHHHHHHHHHHHHHhhcchhhhhhccccccCCHHHHHHHHHHHHHhcCCCCCcccccCCCCcccCceeecchHHHHH Confidence 22 2222221 0100 0 0000011 111222222111 000 001112222334445566 Q ss_pred HHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeec Q lcl|Aclame:pro 55 NVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLR 134 (416) Q Consensus 55 ~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~ 134 (416) +.+|+-+..-|..+.-.+ + .....+..++. .-.....+...+...+..|.+++.+..+. +.+ .+..++ T Consensus 81 ~~~A~lv~~e~~~i~~~d-~-----~~~~~l~~il~----~n~f~~~~~~~~e~a~a~G~~~~k~~~d~-~~~-~I~~v~ 148 (500) T protein:vir:98 81 KKIASLVFNEQAEIKVDD-D-----AANEFISETLK----NDRFNKNFERYLESCLALGGLAMRPYVDG-DKV-RVAFVQ 148 (500) T ss_pred HHHhhhhcCCcceEecCC-h-----HHHHHHHHHHh----hccHHHHHHHHHHHHhhcCCEEEEEEEeC-Cce-EEEEEc Confidence 666666655444432211 1 00111111211 11234556666777788899988887764 433 355667 Q ss_pred cceEEEEEcCCCcE-----------------EEEE----Ee-eCCe--eEE---e------------c--------hh-- Q lcl|Aclame:pro 135 PDYTNAYVHPTTGM-----------------LWYQ----TV-LNGK--AIE---L------------Y--------DY-- 165 (416) Q Consensus 135 p~~v~~~~~~~~~~-----------------~~~~----~~-~~~~--~~~---~------------~--------~~-- 165 (416) |..+-+...+.++. .+|. +. .++. .++ + + +. T Consensus 149 ad~~~P~~~d~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~l~~~~ 228 (500) T protein:vir:98 149 APVFLPLQSNTQDVSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEA 228 (500) T ss_pred CCeeEEEEEcCCCeEEEEEEEEEeeeecCCceEEEEEEEEEEeCCceeEEEEEEEecccccccCcccccccccCCcCcce Confidence 76666543322211 1110 00 0000 000 0 0 00 Q ss_pred --------heeeeccCCCC-----ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceee-----ccCCcC-CHHHH Q lcl|Aclame:pro 166 --------EVLHFKGLSTD-----GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGIL-----KVPAFL-DEKPK 226 (416) Q Consensus 166 --------~vih~~~~~~~-----~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~-----~~~~~~-~~e~~ 226 (416) -+.|++.+..+ ...|+|.+..+...++...........-++.|. ...++ ...... +-+.. T Consensus 229 ~~~~~~~p~f~~~~~~~~N~~~~~sp~G~S~~~~~~~lid~lD~~~s~~~~e~~~g~-~~i~v~~~~l~~~~~~~~g~~~ 307 (500) T protein:vir:98 229 KVTDVTRPIFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQ-RRVAVPESLTALTVRTTDGDVV 307 (500) T ss_pred EeccCCCccEEEecCCccccccCCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhCc-ceeeechHHhcccCCCCCcccc Confidence 12344443222 346999999999999998888888888887654 33333 211110 00000 Q ss_pred HHHHHHHHHhhcCCce-ee----cCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH-- Q lcl|Aclame:pro 227 ENVRKEWKRVNKVENI-AI----IDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ-- 299 (416) Q Consensus 227 ~~~~~~~~~~~~~~~~-~v----l~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~-- 299 (416) .. ..|. . ...+ .. .+++..++.++....+-++.+..+...++|+...|+++..++...++.. ++.+. T Consensus 308 ~~--~~~d-~--~~~~~~~~~~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~gls~~~~~~~~~g~~-TAtei~s 381 (500) T protein:vir:98 308 PR--PRFE-S--DQNVYIRMGGRDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMK-TATEIVS 381 (500) T ss_pred CC--cccC-C--CcceEEEcCCCCCcCcceeEeccccChHHHHHHHHHHHHHHHHHhCCCccccccCcCccc-cHHHHHH Confidence 00 0010 0 0000 01 1234457777777788899999999999999999999999987766542 23332 Q ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHH Q lcl|Aclame:pro 300 -----------SIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEI 368 (416) Q Consensus 300 -----------~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~ 368 (416) ....++.+|..++..|....+..-+..........+.+++++-+..|.++.++...+++.+|+|+.-++ T Consensus 382 ~~~~~~~t~~~~~~~~~~al~~lv~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~v~aGi~s~~~~ 461 (500) T protein:vir:98 382 ENSDTYQMRNSIVALVEQSLKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMA 461 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHH Confidence 223334444444444443322110111112234567777888889999999999999999999999998 Q ss_pred HHHh-CCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 369 RELL-ERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 369 R~~~-gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +.++ |++.- ...+.+- +.++......+..++++ T Consensus 462 i~~~~g~~ee-ea~~~l~--------------~i~~E~~~~~~~~~~~~ 495 (500) T protein:vir:98 462 IQKVLNVTEE-KAQEIAA--------------EINTGIVDEINQQRTDT 495 (500) T ss_pred HHhcCCCCHH-HHHHHHH--------------HHHHhccccCCCCCccc Confidence 8654 55321 1111110 00000001112222222 No 208 >protein:vir:98883 Length: 517 # NCBI annotation: portal # Family: family:all:898 # MgeID: mge:1568 # MgeName: BCJA1c # Cross-refs: genbank:acc:YP_164413;genbank:gi:56694903;genbank:GeneID:3197273 Probab=97.92 E-value=1.1e-05 Score=47.77 Aligned_cols=403 Identities=10% Similarity=0.047 Sum_probs=173.8 Q ss_pred Cc----chhhhcc-------cc--------ccccccccch--hHHHhhhcCcccc-cccccc----HHHHhccHHHHHHH Q lcl|Aclame:pro 1 ML----LERMFEK-------RS--------GSSDHEDGFN--NILLNMFGGRKTA-SGERVS----ESNSLVQPDIFACV 54 (416) Q Consensus 1 m~----~~~~f~~-------~~--------~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~----~~~a~~~~~v~~~i 54 (416) |. ++.+|++ ++ ....+..... ..+..++.+.... ...... .+...+......+. T Consensus 1 m~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~w~~~Y~g~~~~~~~~~~~~~~~~~~~~sl~~~~~i~ 80 (517) T protein:vir:98 1 MKVIQRIKNFFKRGGYALSGQTLKSINDHEKINIDPNELARIERNLRQYEGDYPQVEYINSQGKIQERDYMTLNLRKLSA 80 (517) T ss_pred CchHHHHHHHHHHHHHHhcccchhHhhcCCceecCHHHHHHHHHHHHHhcCCCcccccccccccccccceeecCcHHHHH Confidence 11 1111110 00 0111100000 1112222221110 000000 00111222223333 Q ss_pred HHHHHhhccCcceEEeecCCcceee--eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEe Q lcl|Aclame:pro 55 NVLSDDIAKLPIHTYKRTDGGIERK--PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFP 132 (416) Q Consensus 55 ~~ia~~ia~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~ 132 (416) +.+|+-+..=+..+.-.+.++.... ........|+ +--..-.....++..+.+.+..|.+++.+..+. |.+ .+.. T Consensus 81 ~~~A~Ll~~e~~~i~v~d~~~~~~~~~~~~~~~e~l~-~i~~~n~f~~~~~~~~e~a~a~G~~a~k~~~d~-~~~-~I~~ 157 (517) T protein:vir:98 81 DVLSGLVFNEQCEVYVSDAKDEEKKDNSFKTAHEFIQ-HVFQHNKFIKNLSDYLEPTFALGGLTVRPYVDN-GEI-EFSW 157 (517) T ss_pred HHhhhhhcCCcceEEecccccccccccchhHHHHHHH-HHHHhccHHHHHHHHHHHHhhhCCEEEEEEEeC-Cee-EEEE Confidence 4444443333333332222111100 0001111111 000111234455556677778899999887764 333 3455 Q ss_pred eccceEEEEEcCCCcE-----------------EEEE------------------Ee-----eC-----CeeE------- Q lcl|Aclame:pro 133 LRPDYTNAYVHPTTGM-----------------LWYQ------------------TV-----LN-----GKAI------- 160 (416) Q Consensus 133 l~p~~v~~~~~~~~~~-----------------~~~~------------------~~-----~~-----~~~~------- 160 (416) ++++.+-+...+.++. .+|. +. .. |..+ T Consensus 158 v~ad~~~Pl~~~~~~v~~~ai~~~~~~~~~~~~~~Yt~lE~H~~~~~~~~~~~y~I~n~ly~s~~~~~lG~~v~L~~~~e 237 (517) T protein:vir:98 158 ALANAFYPLRSNSNGISEGVMKSVTTKVIGNKTVYYTLLEFHEWEKTEEGESLYVITNELYKSDNEGEIGKRIPLEELYE 237 (517) T ss_pred EcCCeeEEEEecCCCeEEEEEEEEEEEeecCCceEEEEEEEEecCceeccCCcEEEEEEEEecCCCcccccccccccccc Confidence 5555554422221111 1110 00 00 0000 Q ss_pred ------Eec--hhh-eeeeccCCCC-----ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCC--HH Q lcl|Aclame:pro 161 ------ELY--DYE-VLHFKGLSTD-----GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLD--EK 224 (416) Q Consensus 161 ------~~~--~~~-vih~~~~~~~-----~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~--~e 224 (416) .++ +.. +.|++.+..+ ...|+|....+.+.++.....-.....-++-|.+ +.++. ...+. ++ T Consensus 238 ~l~~~~~~~g~~~Plf~y~~~p~~N~~~~~splG~S~~~~a~~~~d~lD~~~s~~~~e~~~g~~-~i~vp-~~~l~~~~~ 315 (517) T protein:vir:98 238 GMQEKTYIQGLSRPLFNYLKPSGFNNINPHSPLGLGITDNSVSTLKKINDTYDQFWWEIKMGQR-TVFVS-DVMLRTVPD 315 (517) T ss_pred CCCcceeECCCCcceEEEecCCcccccccCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHhCCc-ceecC-hhhhccccC Confidence 000 001 2245443222 3569999999999998888887777777777554 22221 11110 00 Q ss_pred HHHH-HHHHHHHhhcCCc-eeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHH-- Q lcl|Aclame:pro 225 PKEN-VRKEWKRVNKVEN-IAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQS-- 300 (416) Q Consensus 225 ~~~~-~~~~~~~~~~~~~-~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~-- 300 (416) .-.. ....|......-. +..-+++-.++.++....+-++.+..+...+.|+...|+++..++....+. .|+.+.. T Consensus 316 ~~g~~~~~~~d~~~~~y~~~~~~~~~~~i~~~~~~iR~e~~~~~~~~~L~~i~~~~Gls~~t~~~~~~~~-kTATEi~s~ 394 (517) T protein:vir:98 316 ESGMPPPQVFDPDVNVYKSIRMGTDEEFVKDVTHDIRTEQYKEAINQALRTLEMELKLSVGTFSFDGRSM-KTATEIVSE 394 (517) T ss_pred CCCcccCCCCCcccceeeeccCCCCCCceeeeccccchHHHHHHHHHHHHHHHHHhCCCccccccccccc-ccHHHHHHH Confidence 0000 0000000000000 000022335677777788889999999999999999999999999776654 2333321 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-----------cCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHH Q lcl|Aclame:pro 301 IEYVRNTLQPWIVNFEQELNVKL-----------FLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIR 369 (416) Q Consensus 301 ~~f~~~~l~P~~~~i~~~l~~~l-----------~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R 369 (416) ..-.-.++.-+...++..|...+ +..........+.+++++-+..|.++.++...+++.+|+|++-+++ T Consensus 395 ~~~~~~t~~~~~~~~~~aL~~lv~~i~~l~~~~~~~~~~~~~~~~v~v~f~D~i~~D~~~~~~~~~~~v~aG~ms~~~~i 474 (517) T protein:vir:98 395 NDLTYRTRNDHVYEVEQFIKGLVISVLELAKTYKLFGGEIPSAEHIGVDFDDGVFQDRSALLRFYGQAKTFGFIPTVEAI 474 (517) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEcCCCCCCCHHHHHHHHHHHHhcCCCCHHHHH Confidence 11222233344444444443321 1111122345678888899999999999999999999999999987 Q ss_pred HH-hCCCCCCCCCeEeecc--CccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 370 EL-LERNPIENGDKYISSL--NYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 370 ~~-~gl~p~~ggd~~~~~~--n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) .+ .|+..- ..++.+... .....+..+. .+ ...++-..++| T Consensus 475 ~~~~g~~ee-eA~~e~~~i~~E~~~~~~~~~-~~----~~~~~~~gd~e 517 (517) T protein:vir:98 475 QRIFKVPKK-TAEQWLEEIRKDQIELDPVTI-SQ----RAQKRMFGDEE 517 (517) T ss_pred HHhCCCChH-HHHHHHHHHHHhccccCCCCc-cc----cccCCCCCCCC Confidence 65 477532 111111110 0000110000 11 11112222222 No 209 >protein:vir:96266 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1612 # MgeName: ROSA # Cross-refs: genbank:acc:YP_240308;genbank:gi:66395972;genbank:GeneID:5133343 Probab=97.88 E-value=1.3e-05 Score=47.39 Aligned_cols=375 Identities=11% Similarity=0.030 Sum_probs=175.2 Q ss_pred Cc----chhhhccccccccccccchhHHHhhhcCcccc---------ccc--cccHHHHhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 ML----LERMFEKRSGSSDHEDGFNNILLNMFGGRKTA---------SGE--RVSESNSLVQPDIFACVNVLSDDIAKLP 65 (416) Q Consensus 1 m~----~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~a~~~~~v~~~i~~ia~~ia~~~ 65 (416) -. +.++..+...... ....+..++-+...- .+. ..-.+.-.........|+..+..+-+-| T Consensus 26 ~~~~~~i~~~i~~~~~~~~----~~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p 101 (474) T protein:vir:96 26 ETQEEMIIRLINNHKQKLK----DINVGQKYYDKDNDINYQAYKQDLHGNIDYTKPDWRITTNFHQNLVDQKVSYVAGKP 101 (474) T ss_pred cchHHHHHHHHHHHHHHHH----HHHHHHHHhcccCccccccchhhhcccccccccccccccchHHHHHHhhhhhhcccC Confidence 00 1111111110000 001111111111000 000 0000011234556778888888888888 Q ss_pred ceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC Q lcl|Aclame:pro 66 IHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT 145 (416) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~ 145 (416) +.+...+ +.. . .....++. | ........+..+++.+|.||.++.+++.|.+ .+..++|..+-+..++. T Consensus 102 ~~~~~~~-~~~----~-~~l~~~~~--n---~~~~~~~~l~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~ 169 (474) T protein:vir:96 102 VTYAHDD-DKV----L-DVIHQVLD--T---RWDNKLIDILTAASNKGIDWLQVYINEDGEL-KLFRVPAEQAIPIWTDK 169 (474) T ss_pred ceeccCC-hHH----H-HHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEeeeCCCCce-EEEEEcccceEEEEcCC Confidence 8754322 111 1 11222322 2 3456667788999999999999999888876 56678888888877643 Q ss_pred --CcEEE--EEEeeCCe-eEE-echhheeeeccC----------------------C---------CCccccccHHHHHH Q lcl|Aclame:pro 146 --TGMLW--YQTVLNGK-AIE-LYDYEVLHFKGL----------------------S---------TDGIHGKSPIGVVR 188 (416) Q Consensus 146 --~~~~~--~~~~~~~~-~~~-~~~~~vih~~~~----------------------~---------~~~~~G~s~~~~~~ 188 (416) +.... +.+...+. .+. +.+..+.++..- . .+...|.|.++... T Consensus 170 ~~~~~~a~ir~~~~~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~~~~d~e~v~ 249 (474) T protein:vir:96 170 EREQLNAFIRIFTFNGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFKNNPEEVSDIWMYK 249 (474) T ss_pred CCCceEEEEEEEeecCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEecCCCCCCCchHHHH Confidence 22111 11111111 111 122222222100 0 12245778888888 Q ss_pred HHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHH Q lcl|Aclame:pro 189 EHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMK 268 (416) Q Consensus 189 ~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~ 268 (416) ..++....+.....+.+...+.|-.+++--. .+..+..... ....+++.++++.+...+........+.+..+ T Consensus 250 ~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~---~~~~~~~~~~----~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (474) T protein:vir:96 250 SFVDAIDKRLSDVQNMFDESVELIYILRGYE---GEDLSEFMEG----LKYYKAINVSSDGGVETIQVEVPVASTKEYLD 322 (474) T ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhhcCCC---cccccchhhh----hhccceeeccCCCceeEEeccCCHHHHHHHHH Confidence 8887777666666666677666766554321 1111122221 22334666666666666666666677778888 Q ss_pred HHHHHHHHHhccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchh Q lcl|Aclame:pro 269 FNKAQISMIYKVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVK 336 (416) Q Consensus 269 ~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~ 336 (416) ...+.|+..-++|..-.... .++-|... ......+...|..+++.|...+..+ .. ...+. T Consensus 323 ~l~~~I~~~s~~p~~~~~~~-~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~g~~-----~d--~~~i~ 394 (474) T protein:vir:96 323 MMRAYIVEFGQGVDFQTDKF-GSATSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDFNKIK-----LD--AKEIE 394 (474) T ss_pred HHHHHHHHHhCCcCcccccc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----cc--cceee Confidence 88999999999985433221 12221110 1122333344444444443332211 11 12234 Q ss_pred hhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCcccccccccc---ccccC----Cccc Q lcl|Aclame:pro 337 FNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEY---QRLKA----GGAM 407 (416) Q Consensus 337 f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~---~~~~~----~~~~ 407 (416) +.++.-+..+..+.++. +.++|+++.-.+++++++-..|. .+.+- .+..... +.... ++.. T Consensus 395 i~f~~~~p~~~~e~a~~---~~~~giiS~et~~~~lp~v~D~~~E~eri~-------~E~~~~~~~~~~~~~~~~~~~~~ 464 (474) T protein:vir:96 395 ITFNFNVMVNDLEQSQI---GAQSQYLSKETLVRHHPWVDDPKAELERLD-------EEQLELNKQLPNLDDGGADGAQQ 464 (474) T ss_pred EEecCCCccCHHHHHHH---HHHcCCCChHHHHHhCCCCCCHHHHHHHHH-------HHHHHHHhhccccccccCCCCCC Confidence 44455556666666655 44579999999998886543221 11100 0000000 00000 0111 Q ss_pred CCCCccCCC Q lcl|Aclame:pro 408 KGGDNKNEG 416 (416) Q Consensus 408 ~gge~~~~~ 416 (416) .++.+++|+ T Consensus 465 ~~~~~~~e~ 473 (474) T protein:vir:96 465 QQQSENNQS 473 (474) T ss_pred cCCCCcccc Confidence 122222222 No 210 >protein:vir:95899 Length: 474 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1588 # MgeName: 71 # Cross-refs: genbank:acc:YP_240382;genbank:gi:66396046;genbank:GeneID:5133410 Probab=97.88 E-value=1.3e-05 Score=47.39 Aligned_cols=375 Identities=11% Similarity=0.030 Sum_probs=175.2 Q ss_pred Cc----chhhhccccccccccccchhHHHhhhcCcccc---------ccc--cccHHHHhccHHHHHHHHHHHHhhccCc Q lcl|Aclame:pro 1 ML----LERMFEKRSGSSDHEDGFNNILLNMFGGRKTA---------SGE--RVSESNSLVQPDIFACVNVLSDDIAKLP 65 (416) Q Consensus 1 m~----~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~a~~~~~v~~~i~~ia~~ia~~~ 65 (416) -. +.++..+...... ....+..++-+...- .+. ..-.+.-.........|+..+..+-+-| T Consensus 26 ~~~~~~i~~~i~~~~~~~~----~~~~l~~Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p 101 (474) T protein:vir:95 26 ETQEEMIIRLINNHKQKLK----DINVGQKYYDKDNDINYQAYKQDLHGNIDYTKPDWRITTNFHQNLVDQKVSYVAGKP 101 (474) T ss_pred cchHHHHHHHHHHHHHHHH----HHHHHHHHhcccCccccccchhhhcccccccccccccccchHHHHHHhhhhhhcccC Confidence 00 1111111110000 001111111111000 000 0000011234556778888888888888 Q ss_pred ceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC Q lcl|Aclame:pro 66 IHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT 145 (416) Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~ 145 (416) +.+...+ +.. . .....++. | ........+..+++.+|.||.++.+++.|.+ .+..++|..+-+..++. T Consensus 102 ~~~~~~~-~~~----~-~~l~~~~~--n---~~~~~~~~l~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~ 169 (474) T protein:vir:95 102 VTYAHDD-DKV----L-DVIHQVLD--T---RWDNKLIDILTAASNKGIDWLQVYINEDGEL-KLFRVPAEQAIPIWTDK 169 (474) T ss_pred ceeccCC-hHH----H-HHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEeeeCCCCce-EEEEEcccceEEEEcCC Confidence 8754322 111 1 11222322 2 3456667788999999999999999888876 56678888888877643 Q ss_pred --CcEEE--EEEeeCCe-eEE-echhheeeeccC----------------------C---------CCccccccHHHHHH Q lcl|Aclame:pro 146 --TGMLW--YQTVLNGK-AIE-LYDYEVLHFKGL----------------------S---------TDGIHGKSPIGVVR 188 (416) Q Consensus 146 --~~~~~--~~~~~~~~-~~~-~~~~~vih~~~~----------------------~---------~~~~~G~s~~~~~~ 188 (416) +.... +.+...+. .+. +.+..+.++..- . .+...|.|.++... T Consensus 170 ~~~~~~a~ir~~~~~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~~~~d~e~v~ 249 (474) T protein:vir:95 170 EREQLNAFIRIFTFNGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFKNNPEEVSDIWMYK 249 (474) T ss_pred CCCceEEEEEEEeecCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEecCCCCCCCchHHHH Confidence 22111 11111111 111 122222222100 0 12245778888888 Q ss_pred HHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHH Q lcl|Aclame:pro 189 EHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMK 268 (416) Q Consensus 189 ~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~ 268 (416) ..++....+.....+.+...+.|-.+++--. .+..+..... ....+++.++++.+...+........+.+..+ T Consensus 250 ~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~---~~~~~~~~~~----~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (474) T protein:vir:95 250 SFVDAIDKRLSDVQNMFDESVELIYILRGYE---GEDLSEFMEG----LKYYKAINVSSDGGVETIQVEVPVASTKEYLD 322 (474) T ss_pred HHHHHHHHHHHHHHHHHHHhhcchhhhcCCC---cccccchhhh----hhccceeeccCCCceeEEeccCCHHHHHHHHH Confidence 8887777666666666677666766554321 1111122221 22334666666666666666666677778888 Q ss_pred HHHHHHHHHhccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchh Q lcl|Aclame:pro 269 FNKAQISMIYKVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVK 336 (416) Q Consensus 269 ~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~ 336 (416) ...+.|+..-++|..-.... .++-|... ......+...|..+++.|...+..+ .. ...+. T Consensus 323 ~l~~~I~~~s~~p~~~~~~~-~~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~g~~-----~d--~~~i~ 394 (474) T protein:vir:95 323 MMRAYIVEFGQGVDFQTDKF-GSATSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDFNKIK-----LD--AKEIE 394 (474) T ss_pred HHHHHHHHHhCCcCcccccc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----cc--cceee Confidence 88999999999985433221 12221110 1122333344444444443332211 11 12234 Q ss_pred hhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC--CCeEeeccCcccccccccc---ccccC----Cccc Q lcl|Aclame:pro 337 FNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN--GDKYISSLNYVFLDFLEEY---QRLKA----GGAM 407 (416) Q Consensus 337 f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g--gd~~~~~~n~~~~~~~~~~---~~~~~----~~~~ 407 (416) +.++.-+..+..+.++. +.++|+++.-.+++++++-..|. .+.+- .+..... +.... ++.. T Consensus 395 i~f~~~~p~~~~e~a~~---~~~~giiS~et~~~~lp~v~D~~~E~eri~-------~E~~~~~~~~~~~~~~~~~~~~~ 464 (474) T protein:vir:95 395 ITFNFNVMVNDLEQSQI---GAQSQYLSKETLVRHHPWVDDPKAELERLD-------EEQLELNKQLPNLDDGGADGAQQ 464 (474) T ss_pred EEecCCCccCHHHHHHH---HHHcCCCChHHHHHhCCCCCCHHHHHHHHH-------HHHHHHHhhccccccccCCCCCC Confidence 44455556666666655 44579999999998886543221 11100 0000000 00000 0111 Q ss_pred CCCCccCCC Q lcl|Aclame:pro 408 KGGDNKNEG 416 (416) Q Consensus 408 ~gge~~~~~ 416 (416) .++.+++|+ T Consensus 465 ~~~~~~~e~ 473 (474) T protein:vir:95 465 QQQSENNQS 473 (474) T ss_pred cCCCCcccc Confidence 122222222 No 211 >protein:vir:78907 Length: 518 # NCBI annotation: gp3 # Family: family:all:4147 # MgeID: mge:1859 # MgeName: A006 # Cross-refs: genbank:acc:YP_001468843;genbank:gi:157325445;genbank:GeneID:5601904 Probab=97.85 E-value=1.5e-05 Score=47.05 Aligned_cols=392 Identities=10% Similarity=0.022 Sum_probs=176.3 Q ss_pred Ccchhhhcccccccccc----------ccc---hhH-HHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHE----------DGF---NNI-LLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPI 66 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~----------~~~---~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~ 66 (416) =|++.|++......... ... ... ....|.+.....+ +. ..-.+.+....+++.+|+-+..=+. T Consensus 9 ~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~--~~-~~~~~~~l~~~i~~~~A~ll~~e~~ 85 (518) T protein:vir:78 9 RFIKGWLNGKPNGSEPELIPKYLPLVPDNQKEWSKDSYLTSLWAQGYVPT--VH-DKLMNSGTGNEIVVVAAEYISGKPL 85 (518) T ss_pred HHHHHhhcCCCCccchhccHHHhhhcccchhhhhhhhhhhhhcccCCCCc--cc-cccccCChHHHHHHHHHHhhcCCCc Confidence 12333343222110000 000 000 0011111111111 11 1112333456677888887776655 Q ss_pred eEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCC- Q lcl|Aclame:pro 67 HTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPT- 145 (416) Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~- 145 (416) .+.-...+......-...+..+... -....-+...+.+.+..|.+++.+..+ +|++ .+..+++..+-+...+. T Consensus 86 ~i~v~~~~~~d~e~~~~~l~~il~~----n~f~~~~~~~~e~a~a~G~~~~k~~~d-~~~~-~i~~v~ad~~~P~~~~g~ 159 (518) T protein:vir:78 86 SIDVTGVNGSKDENLTKQLKEALRI----DNFDSKSVKIVELAGGSGVSAVKINIL-NGRP-SISVHSSSQFWIDFKNNE 159 (518) T ss_pred eEEecCccccCcHHHHHHHHHHHHh----ccHHHHHHHHHHHhhccCceEEEEEEE-CCee-EEEEEcCCeeEEEeecCc Confidence 5433222111100001111111111 123344555667777888888877655 3554 55666776666543221 Q ss_pred -------------CcEEEEE-E-------------------------eeC-CeeEE---------e----ch-------- Q lcl|Aclame:pro 146 -------------TGMLWYQ-T-------------------------VLN-GKAIE---------L----YD-------- 164 (416) Q Consensus 146 -------------~~~~~~~-~-------------------------~~~-~~~~~---------~----~~-------- 164 (416) +...+|. . ... +..+. + .. T Consensus 160 ~~~~~f~~~~~~~~k~~~y~~lE~he~~~~~~~~~~~~~~~I~n~ly~~~~~~~v~~~~~~~~~~l~~~~~~~~~~e~~~ 239 (518) T protein:vir:78 160 PFRFNFFEEIPTSNKADIYYLVESREIKQWDKEGKKLSGGFVTYSVIKIDGDKTTPISAERLPEQITSYLHTNDIQLNHS 239 (518) T ss_pred EEEEEEEEEeecCCcceeEEEEEeeccccccceeecccceeEEEEEeeecCcccccccccccccccccccccccCcccee Confidence 0111111 0 000 00000 0 00 Q ss_pred ------h-heeeeccCCCC-----ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeecc-----CCcC-CHHHH Q lcl|Aclame:pro 165 ------Y-EVLHFKGLSTD-----GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKV-----PAFL-DEKPK 226 (416) Q Consensus 165 ------~-~vih~~~~~~~-----~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~-----~~~~-~~e~~ 226 (416) . -+.|+++...+ ...|+|.+..+...++...........-|+.| .+..++.. .... ..... T Consensus 240 ~~tg~~~~~~~~~~n~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g-~~~i~v~~~~l~~~~~~~~~~~~ 318 (518) T protein:vir:78 240 VSIGLKSMGAYLINNSPSNTRYPHLNLGESDLSQCTNYLFAVDYFFTVYMREGEKT-KTKIAASERMFRKKVNKSTDKEE 318 (518) T ss_pred eccCCccceEEeeccccccccccCCCcCcchHhhhhHHHHHHHHHHHHHHHHHHhC-CceeeechhHhccCCCCCCCccc Confidence 0 12333332222 24599999999999999988888888888764 45444421 1110 00000 Q ss_pred HHHHHHHHHhhcCCcee-e----cCCCc----eeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHH Q lcl|Aclame:pro 227 ENVRKEWKRVNKVENIA-I----IDYGL----EYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIE 297 (416) Q Consensus 227 ~~~~~~~~~~~~~~~~~-v----l~~g~----~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e 297 (416) ..|.. ..+.. . .++|. .++.++....+.++.+..+...+.|....|+++..++... +..+..| T Consensus 319 ----~~fd~---~~~~y~~i~~~~~~~~~~~~~i~~~~~~Ir~e~~~~~~~~~l~~~~~~~G~s~~tfg~~~-~~~TATe 390 (518) T protein:vir:78 319 ----WSMNV---DEDYFMQFKGTLDAGAKLNDMIQFMQGDFRDGSYRETMEYFAQKAVSKSGYNPATFNLGN-REVKATE 390 (518) T ss_pred ----cccCC---CCceEEEecCcCCCCCccccceeeeecccChHHHHHHHHHHHHHHHHhhCCChhhcCccc-ccccHHH Confidence 00100 00111 1 12232 3667777888889999999999999999999999987532 2221111 Q ss_pred H------------HHHHHHHHHHHHHHHHHHHHHHHhhcCch--hcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCc Q lcl|Aclame:pro 298 H------------QSIEYVRNTLQPWIVNFEQELNVKLFLDH--DQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVL 363 (416) Q Consensus 298 ~------------~~~~f~~~~l~P~~~~i~~~l~~~l~~~~--~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~ 363 (416) - .....++.+|.-++..|...+........ .......+.+++++-+..|.++.++...+++.+|+| T Consensus 391 i~s~~~~~~~t~~~~~~~~e~al~~l~~~i~~l~~~~~~~~~~~~~~~~~~v~i~f~D~i~~D~~~~~~~~~~~v~aGim 470 (518) T protein:vir:78 391 IWSLQDATVRKIEKKKRLIQNVYEQMLWDFLYLLTGGTNNKEKAIMRDEIRVIIEFPDPMSVNLNELSSTLNNMNSALAM 470 (518) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEEeCCCCCCCHHHHHHHHHHHHhcCCC Confidence 1 11233333343344334333322111100 011234578888899999999999999999999999 Q ss_pred CHHHHHHHhCCCCC-CCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 364 NKDEIRELLERNPI-ENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 364 t~NE~R~~~gl~p~-~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ++-++-+++...-. +..++-+.... .+... ..... +..-+|-+-..| T Consensus 471 S~e~~i~~~~~~~~deea~~e~~ri~---~E~~~--~~~~~-p~~~~g~~~~~g 518 (518) T protein:vir:78 471 SVEEKVKLIHPKWEDEEIQAEVKRIY---LENAI--GEVPD-PEAIGGMETKGG 518 (518) T ss_pred CHHHHHHHhCCCCCHHHHHHHHHHHH---HHhcc--cCCCC-CccccCCCCCCC Confidence 99986555422111 11111110000 00000 00000 001122222222 No 212 >protein:vir:4073 Length: 279 # NCBI annotation: minor structural protein # Family: family:all:11744 # MgeID: mge:85 # MgeName: c2 # Cross-refs: genbank:acc:NP_043552;genbank:gi:9628686;genbank:GeneID:1261159 Probab=97.82 E-value=3.4e-07 Score=56.03 Aligned_cols=268 Identities=12% Similarity=0.098 Sum_probs=127.8 Q ss_pred hccHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC Q lcl|Aclame:pro 45 LVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH 124 (416) Q Consensus 45 ~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~ 124 (416) ++ .-.+.+.|.+++-..|.+-..+-+ ..-..+.-++.---|...+-..-++.+....+-.-++| .+... T Consensus 1 ~~----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-- 69 (279) T protein:vir:40 1 MS----LFNLSRRAEDVSFSTFTVQDPTTD----LLLGKLLGLVSYFDNVDYSEASKLEDLFYWALQGKEVY-RVWYG-- 69 (279) T ss_pred Cc----ccccchhhcccceeeeeecCcchh----HHHHHHHHHHHHhhcccchhhhhhhhhhhhhhccceee-hhhhh-- Confidence 00 001222333333333322111000 00011222333344555555444444444333222222 11111 Q ss_pred CcEEEEEeeccceEEEEEcCCCcEEEEEEeeCCeeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 125 GYPEALFPLRPDYTNAYVHPTTGMLWYQTVLNGKAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKL 204 (416) Q Consensus 125 g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~ 204 (416) |.-.....+.++.+... ...+....+++|-++++.+.++ ++|.-+- ....-++ .+.+...+- T Consensus 70 ~~~~~~~~~~~d~fn~~----------vr~~~~~~vtVP~~Dv~IieNP----lv~v~~e-e~~kM~~---la~nai~~K 131 (279) T protein:vir:40 70 GFKYYAQRVNADQFNIV----------VREPNRREVTIRTNDYEMLLNP----FYGANPQ-RFGVMFG---MASNGIGRR 131 (279) T ss_pred hHHHHHhhcCcchhhhh----------eecCCcceeEeecchhhhhhcc----hheeccc-hhhHHHH---HHHhhhhhh Confidence 10001111111111111 1112234567777777766543 2443322 1111111 223444444 Q ss_pred HhccCCcceeeccCCc-CCHHHHHHHH----HHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhc Q lcl|Aclame:pro 205 YKNEATPRGILKVPAF-LDEKPKENVR----KEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYK 279 (416) Q Consensus 205 ~~n~~~~~~v~~~~~~-~~~e~~~~~~----~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~g 279 (416) +.+.+..+++++.+-. ..++..++.+ .....+..-+|+.+++.|.++++++.+..-.. .+..++.+...++.+| T Consensus 132 LD~~~qIk~fIKTd~d~glee~kekaR~rIk~mlalAk~~nGityid~~ddItQL~kDYStsl-k~die~lkS~l~Sq~G 210 (279) T protein:vir:40 132 LDSQAQIKIYWKTKVSSGLKEVWDRIRERLTQQQQLAREFNGVSVIGSDDDIKQIQPDYSGSL-QNDANLAIEIALSEYG 210 (279) T ss_pred hcccceeeeEEecCcchhHHHHHHHHHHHHHHHHHHHHhcCCeeeecCCceeEeecccccccc-HHHHHHHHHHHHhhcC Confidence 5788889999998854 2344444444 44444445578999999999999987555333 4666788899999999 Q ss_pred cchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH------HhhcCchhcccccchhhhhhhhhhccHHHHHHH Q lcl|Aclame:pro 280 VPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELN------VKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEY 353 (416) Q Consensus 280 vp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~------~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~ 353 (416) ||..+|-+ +..|++..+|+..+|+|++++.+..|. .+.++... T Consensus 211 inekIL~G------sAtE~q~iAyy~rtVePILkQyek~liY~~E~fv~y~ttta------------------------- 259 (279) T protein:vir:40 211 MPRELLYG------QSNEVTIIAFAIQKVLPLLKQHDKNIIFNQENFVAYISTTA------------------------- 259 (279) T ss_pred Cchhhccc------cCchhhhhhHHHhhHHHHHHHhcccccchhhhhhhhheecc------------------------- Confidence 99999854 334889999999999999999776443 22222211 Q ss_pred HHHHHhCCCcCHHHHHHHhCCCCCCCCC Q lcl|Aclame:pro 354 LKTLHETGVLNKDEIRELLERNPIENGD 381 (416) Q Consensus 354 ~~~~~~~g~~t~NE~R~~~gl~p~~ggd 381 (416) .+|.+.. .....+-+|+- .| T Consensus 260 -----~gg~~~s--~~~~~~~~~~~-~~ 279 (279) T protein:vir:40 260 -----KGGAIES--KSSKRDSEPVG-ND 279 (279) T ss_pred -----cCccccc--ccccccCCCCC-CC Confidence 1111110 01111222321 11 No 213 >protein:vir:1587 Length: 508 # NCBI annotation: minor capsid protein # Family: family:all:898 # MgeID: mge:32 # MgeName: phig1e # Cross-refs: genbank:acc:NP_695169;swissprot:trembl:o03928;genbank:gi:23455800;interpro:IPR006432;uniprot:O03928;genbank:GeneID:955566 Probab=97.75 E-value=2.2e-05 Score=46.07 Aligned_cols=389 Identities=10% Similarity=0.054 Sum_probs=180.8 Q ss_pred Ccc----hhhhcc--------cccc--cc-ccccch-------hHHHhhhcCcc-cccccccc----HHHHhccHHHHHH Q lcl|Aclame:pro 1 MLL----ERMFEK--------RSGS--SD-HEDGFN-------NILLNMFGGRK-TASGERVS----ESNSLVQPDIFAC 53 (416) Q Consensus 1 m~~----~~~f~~--------~~~~--~~-~~~~~~-------~~~~~~~~~~~-~~~~~~~~----~~~a~~~~~v~~~ 53 (416) |.+ +++|++ ++.. +. ..-..+ .....++.+.. ........ .+...+......+ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ri~~~~~~y~g~~~~~~~~~~~~~~~~~~~~sln~~~~i 80 (508) T protein:vir:15 1 MGLIQRIKDLFWKGAAATGVTGSLSKITDDPRISIDPDEYVRIQTDLDYYSDKLQYIHYQASDGIKKKRLKNTINMAKTA 80 (508) T ss_pred CChHHHHHHHHHHHHHHhccccchHHhhcccccccCHHHHHHHHHHHHHhcCCCcccccccCCCCccccceeecchHHHH Confidence 322 233322 1100 00 000000 11112222211 11111100 0111122344566 Q ss_pred HHHHHHhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEee Q lcl|Aclame:pro 54 VNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPL 133 (416) Q Consensus 54 i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l 133 (416) ++..|+-+..=|..+.-.+++ . .+..+..++.. | .........+.+.+..|.+++.+..+.. . ..+..+ T Consensus 81 ~~~~A~lv~~e~~~i~v~~~~-~----~~e~l~~il~~-n---~f~~~~~~~~e~a~a~G~~~~k~~~d~~-~-~~i~~v 149 (508) T protein:vir:15 81 ARRIASVVFNEKAEIHVKDNN-E----ADKFLNDVLED-N---DFKNKFEEALEKGVALGGFAMRPYIDGN-H-IKIAWV 149 (508) T ss_pred HHHHHhhhhCCCceEEeCCch-H----HHHHHHHHHHh-c---cHHHHHHHHHHHHhhcCceEEEEEEeCC-e-eEEEEE Confidence 666666665545444432211 0 01111112111 1 2234455667777889999998877653 3 345556 Q ss_pred ccceEEEEEcCCCcE-----------------EEEE----Ee--eC-CeeE---------------Ee-----c-----h Q lcl|Aclame:pro 134 RPDYTNAYVHPTTGM-----------------LWYQ----TV--LN-GKAI---------------EL-----Y-----D 164 (416) Q Consensus 134 ~p~~v~~~~~~~~~~-----------------~~~~----~~--~~-~~~~---------------~~-----~-----~ 164 (416) +|..+-+...+.++. .+|. +. .. ...+ .+ + . T Consensus 150 ~ad~~~P~~~d~~~~~~~af~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~e~~~l~ 229 (508) T protein:vir:15 150 RADQFYPLQSNTNDISEAAIASRTQRTESNQTKYYTLLEFHQWQDNGSYQITNELYKSDSPDIVGNQVPLSTLPVYKELA 229 (508) T ss_pred cCCeeEEEEEcCCCeEEEEEEEEEEeecCCCceEEEEEEEEEEecCcceEEEEEEEecCCchhcCcccchhhcccccCCC Confidence 666655532222221 0110 00 00 0000 00 0 0 Q ss_pred h----------heeeeccCCCC-----ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC-cCCHHHHHH Q lcl|Aclame:pro 165 Y----------EVLHFKGLSTD-----GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA-FLDEKPKEN 228 (416) Q Consensus 165 ~----------~vih~~~~~~~-----~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~-~~~~e~~~~ 228 (416) + -..||+.+..+ ...|+|.+..+...++...........-++.| .+..++...- ..+++... T Consensus 230 ~~~~~~g~~~p~f~y~~~~~~N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~~~-~~~i~v~~~~l~~d~~~~~- 307 (508) T protein:vir:15 230 PQVTISGLQRPLFAYFKTPGANNINIESPLGLGVVDNAKHVLDDINDTHDQFIWEIRLG-QKHIAVQPGMLRFDDEHKP- 307 (508) T ss_pred cceEecCCCcceeEEecCCccccccCCCCcCCchHhhhHHHHHHHHHHHHHHHHHHHhc-ccceeechHHhcCCCCCcc- Confidence 0 12244433222 34699999999999999888888888888644 4444442110 00111100 Q ss_pred HHHHHHHhhcCCcee-e----cCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH---- Q lcl|Aclame:pro 229 VRKEWKRVNKVENIA-I----IDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ---- 299 (416) Q Consensus 229 ~~~~~~~~~~~~~~~-v----l~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~---- 299 (416) .|.. ..... . -++|..++.++....+-++.+..+...+.|....|+++..+|...++.. ++.+. T Consensus 308 ---~~~~---~~~~~~~~~~~~~~~~~i~~~~~~ir~e~~~~~~~~~l~~~~~~~gls~~~f~~~~~~~~-TAtei~s~~ 380 (508) T protein:vir:15 308 ---TFDT---EQNVYVGVLSDDNNGLGVKDMTTPIRTVQYKDAIDHFIKEFEVQIGLSTGTFSYSNDGVK-TATEVVSNN 380 (508) T ss_pred ---ccCC---CCeeEEeccCCCCCCCceeEeecccChHHHHHHHHHHHHHHHHHhCCCchhcccccCccc-cHHHHHHHH Confidence 1110 11111 0 1344567778877788889999999999999999999999987665533 33332 Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHhhcCch--------hcccccchhhhhhhhhhccHHHHHHHHHHHHhCCC Q lcl|Aclame:pro 300 ---------SIEYVRNTLQPWIVNFEQELNVKLFLDH--------DQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGV 362 (416) Q Consensus 300 ---------~~~f~~~~l~P~~~~i~~~l~~~l~~~~--------~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~ 362 (416) ....++.+|..++..|....+..-+... .......+.+++++-+..|.++.++...+++.+|+ T Consensus 381 ~~~~~t~~~~~~~~~~al~~lv~~il~l~~~~~~~~~g~~~~~~~~~~~~~~v~v~f~D~i~~d~~~~~~~~~~~v~aGi 460 (508) T protein:vir:15 381 SMTYQTRSSYLTMVEKAIDELCQSIFELANAGALFDDGKPLFTLDSASQPLDIECHFDDGVFVNKDKQLEEDAKVLAIGA 460 (508) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccCCcceEEEeCCCCCCCHHHHHHHHHHHHhcCC Confidence 1222333444443333333221101000 01123457788888889999999999999999999 Q ss_pred cCHHHHHHHh-CCCCCCCCCeEeeccCccccccccccccccCCcccCCCCcc Q lcl|Aclame:pro 363 LNKDEIRELL-ERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNK 413 (416) Q Consensus 363 ~t~NE~R~~~-gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~ 413 (416) |+.-+++... |++.- ..++-+-.. ..+.+.........+..+|++++ T Consensus 461 ~s~e~~i~~~~g~~de-ea~~el~ri---~~E~~~~~~~~~~~~~~~g~~ge 508 (508) T protein:vir:15 461 LSKQTFLQRNYGMTDE-QAAEELAKI---QSEAPTDTFEGGRSAILNGGDGE 508 (508) T ss_pred CCHHHHHHhcCCCChH-HHHHHHHHH---HHhccccCccccccccCCCCCCC Confidence 9999988653 54331 111111100 00111110111111222333333 No 214 >protein:vir:9568 Length: 410 # NCBI annotation: gp34 # Family: family:all:524 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862873;genbank:gi:32469465;genbank:GeneID:1461310 Probab=97.75 E-value=2.3e-05 Score=46.06 Aligned_cols=348 Identities=12% Similarity=0.102 Sum_probs=162.6 Q ss_pred hhhhccccccccccccchhHHHhhhcCccccccc--cccH----HHHhccHHHHHHHHHHHHhhccCcceEEeecCCcce Q lcl|Aclame:pro 4 ERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGE--RVSE----SNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIE 77 (416) Q Consensus 4 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~ 77 (416) -..+..|. .....++.+....... .+-+ ..-+...+..-+|+.++..+.=-.|. .. + T Consensus 1 l~~~~~r~----------~~~~~yY~g~~~~~~~~~~~p~~~~~~~~~v~nw~~~~Vds~a~rl~~~Gf~---~~-d--- 63 (410) T protein:vir:95 1 MNLYQSRV----------NLRYKHYAMQHYEAPTGITIPAHIRAKYQAVLGWAAKGVDSLADRLIFRAFA---ND-D--- 63 (410) T ss_pred CCcchhhH----------HHHHHHhcCCCCccccchhccHHHHhHHHhhcchhHHHHHHhHhhhcccccc---CC-C--- Confidence 11122111 1112222222111111 1111 10112345556666666544323331 11 1 Q ss_pred eeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEE--Ee- Q lcl|Aclame:pro 78 RKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQ--TV- 154 (416) Q Consensus 78 ~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~--~~- 154 (416) ..+.. ++.+ | +.......+..+.+.+|+||+.+..++.|.| .+.++.|.++....++..+...+- +. T Consensus 64 ----~~l~~-i~~~-N---~ld~~~~~~~~~al~~G~sf~~v~~~~d~~~-~i~~~sP~~~~~i~Dp~~~~~~~al~~~~ 133 (410) T protein:vir:95 64 ----FNVTE-IFDR-N---NPDIFFDSAILSALIGSCSFVYISKGEDDEV-RLQVIESSNATGVIDPITGLLVEGYAVLA 133 (410) T ss_pred ----chHHH-HHhh-c---ChHHHHHHHHHHHHHhCceeEEEecCCCCce-EEEEEcccceEEEEeCCCCceEEEEEEEE Confidence 12323 3332 2 2335666788999999999999998888876 678899999988888755433211 11 Q ss_pred -eC-Cee---EEechh---------------------heeeeccCC-CCccccccH----HHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 155 -LN-GKA---IELYDY---------------------EVLHFKGLS-TDGIHGKSP----IGVVREHIGAQAAATKYNAK 203 (416) Q Consensus 155 -~~-~~~---~~~~~~---------------------~vih~~~~~-~~~~~G~s~----~~~~~~~i~~~~~~~~~~~~ 203 (416) .. +.. ..+.++ .|++|.+.. ....+|.|- +..+.+.+.....-...... T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~l~~~~G~s~I~~~v~~l~da~~r~~~~~~~~~e 213 (410) T protein:vir:95 134 RDDYNRPTLEAYFEPNATHFIPKDGEPYSVTNETGIPLLVPVIHRPDAVRPFGRSRITRAGMYYQKYAKRTLERADITAE 213 (410) T ss_pred ecCCCeEEEEEEEeCCcEEEEeeCCccccccCCCCCcceEEecccccCCccCCccccchhHHHHHHHHHHHHHHHHHHHH Confidence 11 110 011112 344554332 234467663 44444444444444444444 Q ss_pred HHhccCCcceeec-cCCcCCHHHHHHHHHHHHHhhcCCceeecCC-----CceeEeccCChhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 204 LYKNEATPRGILK-VPAFLDEKPKENVRKEWKRVNKVENIAIIDY-----GLEYQSISMPLQEAQFVESMKFNKAQISMI 277 (416) Q Consensus 204 ~~~n~~~~~~v~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~-----g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~ 277 (416) ++. .|.-++. .+... +..+.++.. .++++.++. +.++.++....- ..+.+..+.....||.. T Consensus 214 ~~a---~pqr~i~G~d~d~--~~~~~~~~~------~~~i~~~~~~~~~~~~~v~q~~~~~l-~~~~~~l~~l~~~~a~~ 281 (410) T protein:vir:95 214 FYS---WPQKYILGLDPDA--EPMEKWKAT------VSSLLTISSSDKGVKPSVGQFTTASM-SPFTEQLRTAAAGFAGE 281 (410) T ss_pred Hhc---chhheeeccCCCC--CcCchhhhh------hhhheeccCCCCCCcceEEecCCCCh-HHHHHHHHHHHHHHhhh Confidence 443 3433332 22211 111122211 233555542 345555543221 24889999999999999 Q ss_pred hccchhhcccccCCCcccHHH---HHHHHHHHHHHHHHHHHHHHHHHhh----cCchhc----ccccchhhhhh---hhh Q lcl|Aclame:pro 278 YKVPLHKLNELDKATFSNIEH---QSIEYVRNTLQPWIVNFEQELNVKL----FLDHDQ----KSGHYVKFNID---SEL 343 (416) Q Consensus 278 ~gvp~~~lg~~~~~~~s~~e~---~~~~f~~~~l~P~~~~i~~~l~~~l----~~~~~~----~~~~~~~f~~~---~l~ 343 (416) -++|+..+|.... |-++.+. +...+ ...++-..+.+.+.+.+.+ ...... .....+++... +.. T Consensus 282 s~lP~~~lg~~~~-NpsSa~Al~a~~~~L-~~ka~~k~~~fg~~l~~~~rla~~i~~~~~~~~~~~~~~~v~W~p~~d~~ 359 (410) T protein:vir:95 282 MGLTLDDLGFVSD-NPSSVEAIKASHENL-RLAGRKAQRSLGAGLLNVAYVAACLRDEFRYTRSQFVRTAVKWEPLFEAD 359 (410) T ss_pred cCCCHHHhccccC-chhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccceeeEEeeecCCcc Confidence 9999999996443 2222221 11111 1112223333333333311 110000 11112222222 234 Q ss_pred hccHHHHHHHHHHHHhC--CCcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCC Q lcl|Aclame:pro 344 RGDSKTQAEYLKTLHET--GVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGD 411 (416) Q Consensus 344 ~~d~~~~~~~~~~~~~~--g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge 411 (416) ..+....++++.|++++ |+....-+++++|+.+.+- -. . ..+.++.+ |+ T Consensus 360 ~~s~a~~aDa~~Kl~~a~~g~~~~~~~~~~lg~~~~~~---~~-~--------~~~e~~~~-------g~ 410 (410) T protein:vir:95 360 ANTMTMIGDGVVKLNQALPGYINAETIRDLTGIAGDMS---AK-P--------VVSEGGSN-------GE 410 (410) T ss_pred hhhHHHHHHHHHHHHHhccCCccHHHHHHhcCCChHHH---HH-H--------HHHHHHhC-------CC Confidence 45678889999999988 7888888999999975411 00 0 00001110 11 No 215 >protein:vir:79703 Length: 505 # NCBI annotation: minor structural protein gp61 # Family: family:all:898 # MgeID: mge:1873 # MgeName: LL-H # Cross-refs: genbank:acc:YP_001285880;genbank:gi:148750838;genbank:GeneID:5220405 Probab=97.64 E-value=3.4e-05 Score=45.06 Aligned_cols=389 Identities=10% Similarity=0.040 Sum_probs=183.6 Q ss_pred Ccchhhhcccccccc-------ccccch-------hHHHhhhcCccc-cccccc----cHHHHhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MLLERMFEKRSGSSD-------HEDGFN-------NILLNMFGGRKT-ASGERV----SESNSLVQPDIFACVNVLSDDI 61 (416) Q Consensus 1 m~~~~~f~~~~~~~~-------~~~~~~-------~~~~~~~~~~~~-~~~~~~----~~~~a~~~~~v~~~i~~ia~~i 61 (416) =+|+|+|.+-...+. +..... .....++.+-.. .....+ ..+...+......+++.+|+-+ T Consensus 9 ~~~~~~~~~~~~~~~~~~i~d~~~i~~~~~~~~~i~~~~~~Y~g~~~~l~~~~~~~~~~~~~~~slnl~~~i~~~~A~ll 88 (505) T protein:vir:79 9 NLFRKGSAAVGMTKSLGQIIDDPRINLPADEVERIARDKRYYMDDFKQVTHKNSYGDTQKHELQSVNVTKLASAKLASLI 88 (505) T ss_pred HHHHHhhhhhcchhhhhhhhcccCCCCCHHHHHHHHHHHHHhcCCCccccccccCCCccccceeecchHHHHHHHHHhhh Confidence 123333332111110 001111 111222222111 000000 0011122234455666666666 Q ss_pred ccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEE Q lcl|Aclame:pro 62 AKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAY 141 (416) Q Consensus 62 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~ 141 (416) ..=|..+.-.++ .....+..+... -.....+...+.+....|.+++.+..+. |.+ .+..++|..+-+. T Consensus 89 ~~e~~~i~~~d~------~~~e~l~~i~~~----n~f~~~~~~~~e~a~a~G~~~~k~~~D~-~~~-~i~~v~ad~~~P~ 156 (505) T protein:vir:79 89 FNEQCQVTVSDE------TANDFLDDVFQQ----NDFYTTFEEKLEEWIALGSGCVRPYVDS-GKI-KLAWATADQVYPL 156 (505) T ss_pred cCCCceeecCCh------HHHHHHHHHHHh----ccHHHHHHHHHHHHhhcCCeEEEEEEeC-Cce-EEEEEcCCeeEEE Confidence 555544432111 001111111111 1234555667778888999999887764 433 4555666666654 Q ss_pred EcCCCcE-----------------EEEE----EeeC-------------------CeeE---------------Ee---c Q lcl|Aclame:pro 142 VHPTTGM-----------------LWYQ----TVLN-------------------GKAI---------------EL---Y 163 (416) Q Consensus 142 ~~~~~~~-----------------~~~~----~~~~-------------------~~~~---------------~~---~ 163 (416) ..+.++. .+|. +... +..+ .+ + T Consensus 157 ~~d~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~~~l~~~~~~~g~~ 236 (505) T protein:vir:79 157 QADTNQVNELAIASRTTEVENHRTIYYTLLEFHQWDHGDYVITNELYRSEAAETVGINVPLNSLEQYEGLEPQVKITGLK 236 (505) T ss_pred EEcCCCeEEEEEEEEEEEecCCcceEEEEEEEEEecCceEEEEEEEEecCCCCccCcccchhhcccccccCcceeecCCC Confidence 3222221 0110 0000 0000 00 0 Q ss_pred hhheeeeccCCCC-----ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccee----eccCCcCCHHHHHHHHHHHH Q lcl|Aclame:pro 164 DYEVLHFKGLSTD-----GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGI----LKVPAFLDEKPKENVRKEWK 234 (416) Q Consensus 164 ~~~vih~~~~~~~-----~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v----~~~~~~~~~e~~~~~~~~~~ 234 (416) .-.+.|++.+.++ ...|+|.+..+...++...........-++.|...-.+ ++.......+....-...|. T Consensus 237 ~p~f~~~~~~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g~~~i~v~~~~l~~~~~~~~~~~~~~~~~fd 316 (505) T protein:vir:79 237 HPLFAFYRNKGANNKNFTSPMGMSLIDNSYTVIDAINRTHDQFVDEVKKGQRRLIVPAEWLKTGSSYGGQASETHPPMFD 316 (505) T ss_pred cceEEEecCCcccccccCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhcccceeechHHhcccCCCCcccccccccCCC Confidence 0123345543222 34699999999999998888888888888766433122 22222111111000000111 Q ss_pred HhhcCC-ceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH-------------H Q lcl|Aclame:pro 235 RVNKVE-NIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ-------------S 300 (416) Q Consensus 235 ~~~~~~-~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~-------------~ 300 (416) .....- .+..=+++..++.++......++.+..+...+.|+...|+++..++...++.. ++.+. . T Consensus 317 ~~~~~y~~~~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~~~~~~~~~~-TAtei~s~~~~l~~t~~~~ 395 (505) T protein:vir:79 317 PDETVYQAMYGDASEVGFHDATSPIRVADYQATMDFFLREFENQTGLSQGTFTTSPSGIQ-TATEVVTNNSQTYQTRSSY 395 (505) T ss_pred ccceeeeeccCCCCCCceEEecccCCHHHHHHHHHHHHHHHHHHhCCChhhcCCCccccc-hHHHHHHHHhHHHHHHHHH Confidence 100000 00011234567788888888899999999999999999999999987665533 23222 1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCchh------cccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHh-C Q lcl|Aclame:pro 301 IEYVRNTLQPWIVNFEQELNVKLFLDHD------QKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELL-E 373 (416) Q Consensus 301 ~~f~~~~l~P~~~~i~~~l~~~l~~~~~------~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~-g 373 (416) ...++.+|..++..|........+...+ ......+.+++++-+..|.++.++...+++.+|+|+.-+++... | T Consensus 396 ~~~~~~al~~li~~i~~~~~~~~~~~~g~~~~~~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~v~~Gi~s~e~~l~~~~~ 475 (505) T protein:vir:79 396 ITQVEKTIKALTYAILELASVPSFYADGQARWTGDVDSLDITINFNDGVFVDQESKRAADLQAVQAQVMPKKQFLMRNYG 475 (505) T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccCCCCceeEEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHhcCC Confidence 2223444444444444332221111111 11234677888888899999999999999999999999888753 4 Q ss_pred CCCCCCCCeEeeccCccccccccccccccCC-cccCCCC Q lcl|Aclame:pro 374 RNPIENGDKYISSLNYVFLDFLEEYQRLKAG-GAMKGGD 411 (416) Q Consensus 374 l~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~-~~~~gge 411 (416) ++.- ..++-+ ..+ .+.+....+ ...-||| T Consensus 476 ~~ee-ea~~el-----~ri---~~E~~~~~p~~~~~gg~ 505 (505) T protein:vir:79 476 LDEE-EADEWL-----AQI---DAENSTAEPEFNQFGGD 505 (505) T ss_pred CChH-HHHHHH-----HHH---HHhccccCCCchhccCC Confidence 4321 111111 011 011111111 2345676 No 216 >protein:vir:102950 Length: 471 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945279;genbank:gi:39653714;interpro:IPR006428;uniprot:Q708N3;genbank:GeneID:2672864 Probab=97.54 E-value=4.8e-05 Score=44.28 Aligned_cols=371 Identities=9% Similarity=-0.016 Sum_probs=175.5 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcc-------------------ccccccccHHHHhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRK-------------------TASGERVSESNSLVQPDIFACVNVLSDDI 61 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~a~~~~~v~~~i~~ia~~i 61 (416) ++- ++..+....... ...+..++-+.. ...........-+.++....+|+..+.-+ T Consensus 9 ~i~-~~~~~~~~~~~~----~~~~~~Yy~g~hdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~~yl 83 (471) T protein:vir:10 9 IIS-SQMVKHGKFVSQ----AAEAEKYYRNENDIKRKRKPADKKGAENEAKAEDNAFRNADNRISHNWHQLLLDQKKAYA 83 (471) T ss_pred HHH-HHHHHHHHHHHH----HHHHHHHhccccccccccchhhhhcccccccccccccccccceeccchhHHHHHhhhhhh Confidence 111 010000000000 000111111100 00000000111123456677788888888 Q ss_pred ccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC-CCcEEEEEeeccceEEE Q lcl|Aclame:pro 62 AKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS-HGYPEALFPLRPDYTNA 140 (416) Q Consensus 62 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~-~g~~~~l~~l~p~~v~~ 140 (416) -+-|+.+...+ +.. . ..+..+.. | ........+...++.+|.+|.++.++. .|+ ..+..++|..+-+ T Consensus 84 ~G~p~~~~~~~-~~~----~-~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~g~-~~~~~~~p~~~~~ 151 (471) T protein:vir:10 84 LTYPPTFDVDD-KKV----N-DMIVDVLG--D---DYERISKQLCVNAGNAGIAWLHVWKDASDNS-FRYACVDSKEVIP 151 (471) T ss_pred cccCceeccCC-hHH----H-HHHHHHHh--c---CHHHHHHHHHHHHhhCCeEEEEEEeeCCCCe-eEEEEEcccceEE Confidence 78887753221 111 1 12222221 2 234566777889999999999998874 465 4677788988888 Q ss_pred EEcCCCc--EE----EEEEee--CCeeE----EechhheeeeccCC---------------------------------- Q lcl|Aclame:pro 141 YVHPTTG--ML----WYQTVL--NGKAI----ELYDYEVLHFKGLS---------------------------------- 174 (416) Q Consensus 141 ~~~~~~~--~~----~~~~~~--~~~~~----~~~~~~vih~~~~~---------------------------------- 174 (416) ..++... .. +|.... .+... .+.++.+.|++... T Consensus 152 i~d~~~~~~~~~~ir~~~~~~~~~~~~~~~~~vy~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 231 (471) T protein:vir:10 152 IYSKSLDKKSIGVLRVYSSIDETDGKNYTVYEYWNDKECSFYRHEKEKPLEELETFQAISLIDTMNGDRSSDNSFKHDFG 231 (471) T ss_pred EEcCCCCCceEEEEEEEEeeccCCCceeEEEEEEeCCcEEEEEecCCcccccccccccccccccccccccccccccCCCC Confidence 7765431 21 121110 11111 12233333332100 Q ss_pred -------CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC-cCCHHHHHHHHHHHHHhhcCCceeecC Q lcl|Aclame:pro 175 -------TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA-FLDEKPKENVRKEWKRVNKVENIAIID 246 (416) Q Consensus 175 -------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~vl~ 246 (416) .+...|.|.+......++....+.....+.+...+.|-.+++--. ...++.... . ...+++.++ T Consensus 232 ~iPvv~~~n~~~~~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~-------~-~~~~~i~~~ 303 (471) T protein:vir:10 232 LVPFIPFKNNEIETNDLKPIKDLVDVYDKVFSGFVNDTDDVQEVIFVLTNYGGQDKQEFLED-------L-KRYKMIKMD 303 (471) T ss_pred ceeEEEeccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCccccchhHHH-------h-hcCCeEEec Confidence 012347787887777777777666666666676666766655422 112221111 1 122233222 Q ss_pred -----CCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHH Q lcl|Aclame:pro 247 -----YGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQ 309 (416) Q Consensus 247 -----~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~ 309 (416) .+.+++.+........+....+...+.|+..-++|..-.... |+-|.. ....+..+..++. T Consensus 304 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~tp~~~~~~~--gn~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~ 381 (471) T protein:vir:10 304 NDGMGDQSGVTTIAIDIPTEARNLILERTKKQIFISGQGVNPETDKL--GNSSGVALKFLYSLLELKAGNMETQFRSGYA 381 (471) T ss_pred CCCCccCccceEEeecCChHHHHHHHHHHHHHHHHHhCCcCCCcccc--cCccHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 223444444444455667778888889999998885433222 222211 1112223333344 Q ss_pred HHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCc Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNY 389 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~ 389 (416) -+++.|...+.. . ....+.+.+...+..|..+.++.+.++ +|+++.--+.++++.-..+. .-+ T Consensus 382 ~~~~li~~~~~~-----~---d~~~i~i~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~~p~v~D~~-------~E~ 444 (471) T protein:vir:10 382 TLVKMILKHLGL-----S---DKLKIKQTWTRNSINNDTEMAQVVSTL--ATITSRENVAKSNPIVEDWQ-------DEL 444 (471) T ss_pred HHHHHHHHHhcc-----C---CCceeEEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhCCCCCCHH-------HHH Confidence 444444433321 1 123355666777889999999999887 68999888888775422110 011 Q ss_pred cccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 390 VFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 390 ~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) ..+.. +.....++.+...++++++|. T Consensus 445 eri~~-E~~~~~~~~~~~~~~~~~~e~ 470 (471) T protein:vir:10 445 RLQKA-EQEGRSEKLYDMEEVEHESEV 470 (471) T ss_pred HHHHH-HHHHHHhcccccCCCCCcccc Confidence 11111 011112222334455555555 No 217 >protein:vir:78083 Length: 537 # NCBI annotation: gp3 # Family: family:all:125 # MgeID: mge:1844 # MgeName: P35 # Cross-refs: genbank:acc:YP_001468787;genbank:gi:157325368;genbank:GeneID:5601845 Probab=97.40 E-value=7.6e-05 Score=43.16 Aligned_cols=395 Identities=11% Similarity=0.031 Sum_probs=179.4 Q ss_pred Ccchhhhcc----c------c---ccccccccchhHHHh---hhcCccccccccccHHHHhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MLLERMFEK----R------S---GSSDHEDGFNNILLN---MFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKL 64 (416) Q Consensus 1 m~~~~~f~~----~------~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~ 64 (416) |-+..+|.+ . . ....+..+-.+.+.. .++...........+..=..+....-.|+..+.-+-+- T Consensus 11 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~YY~g~h~Il~r~~~~~~~~~~~~~d~~~~nnki~~nf~k~Ivd~~~~yl~G~ 90 (537) T protein:vir:78 11 DQLGGLLNTEITTYMASNHIKWAHIGENYYNQENDIEKSRIFYMNDKGQLREDNYASNVKISHGFFTELVDQLAQYLLSN 90 (537) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccccccccccccccccccccccccchHHHHHHHHhhhhccc Confidence 111111110 0 0 001111111110000 00000000000000001122344556777788888888 Q ss_pred cceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcC Q lcl|Aclame:pro 65 PIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHP 144 (416) Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~ 144 (416) |+.+...+++ .. .....|..- +. .........+..++..+|.+|.++..+..|.+ .+..++|..+-+..++ T Consensus 91 Pv~~~~~d~~-~~-----e~~~~l~~~-~~-~~~~~~~~el~~~~s~~G~ay~~~y~de~~~~-~~~~i~p~~~~pv~d~ 161 (537) T protein:vir:78 91 GVEVKVKDED-NT-----QLDEILQEY-FD-EDFQATIDTLVTNASKKGFEGIFARTTSEGKL-KFQTVDGLTLIPVFDD 161 (537) T ss_pred CceeecCcch-hH-----HHHHHHHHH-hh-ccHHHHHHHHHHHHhhcCeeEEEeeecCCCce-EEEEEccceeEEEEcC Confidence 8875432221 11 122233221 11 23345667788899999999999999998865 4677888887777765 Q ss_pred CCcEE----EEEE-eeC-----Cee---E-EechhheeeeccC------------------------------------- Q lcl|Aclame:pro 145 TTGML----WYQT-VLN-----GKA---I-ELYDYEVLHFKGL------------------------------------- 173 (416) Q Consensus 145 ~~~~~----~~~~-~~~-----~~~---~-~~~~~~vih~~~~------------------------------------- 173 (416) .+... +|.. ... ... + .+.++.+.+.+.. T Consensus 162 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~evyt~~~i~~y~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 241 (537) T protein:vir:78 162 YGVLKMIIRWYSEIRYSTKQQSTETIWHADVWNEEAVCYYIQDDEGVSTTYKLDEAYNPNPAPHVLAIEESTDADFEDTD 241 (537) T ss_pred CCCceeEEEEEeeeeccccccCcceEEEEEEEcCCcEEEEEecCCcccccccccccccccccceeeeccccccccccccc Confidence 54321 1110 000 000 0 1223333332110 Q ss_pred -------C---------CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCC-cCCHHHHHHHHHHHHHh Q lcl|Aclame:pro 174 -------S---------TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPA-FLDEKPKENVRKEWKRV 236 (416) Q Consensus 174 -------~---------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~-~~~~e~~~~~~~~~~~~ 236 (416) + .+...|.|.++.+...++....+....++.+...+-|-.+++--. ...++..+.++ T Consensus 242 ~~~~~~~~~g~iPvv~f~nn~~~~sd~e~v~~LiDayd~~~S~~an~~~~~~~~ilvi~g~~~~~~~~~~~~l~------ 315 (537) T protein:vir:78 242 GYQVLGRSYSKFPFQLLYNNKDGMSDVKRVKSIIDDYDVMNCFLSNNLQDFSEAIYVVKGFSGDSTDKLRQNIK------ 315 (537) T ss_pred cccccccCCcceeEEEeccCccCCCchhhhHHHHHHHHHHHHhhhhHHHHhcCceeeeecCCCccchhHHHHHh------ Confidence 0 012357888888888888888887777777777766666655322 22222222221 Q ss_pred hcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHH Q lcl|Aclame:pro 237 NKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYV 304 (416) Q Consensus 237 ~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~ 304 (416) ..+-+.+-+++.++..+.....+.......+...+.|+..-.+|.. .....|+-|.. .......+ T Consensus 316 -~~~~i~v~~d~~~v~~l~~~~~~~~~e~~ld~L~~~I~~~s~~~~~--~~~~~gn~SGvAlk~~~~~l~~ka~~ke~~f 392 (537) T protein:vir:78 316 -AKKMIGVNGDNAGMEIQTVSIPYEARKAKMDIDVENIYRSGMGFNS--TAVGDGNVTNVVIKSRYTLLAMKARKMETSL 392 (537) T ss_pred -hcCceeecCCCCceeEEEecCCHHHHHHHHHHHHHHHHHhcCCCCC--ccccccCCcHHHHHHHHhhHHHHHHHHHHHH Confidence 1222223333444444444444445555666677777665544431 22222332221 12233445 Q ss_pred HHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC--- Q lcl|Aclame:pro 305 RNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGD--- 381 (416) Q Consensus 305 ~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd--- 381 (416) ..+|+-.++.|...++.+-.... ....+.+.+..-+..+..+.++.+.++++.|+++..-+.+.+++-..+.-. T Consensus 393 ~~~l~~~~~~i~~~~~~~~~~~~---d~~~i~i~f~~~~P~n~~e~a~~~~~l~~~giiS~eT~l~~~p~vdd~e~ek~~ 469 (537) T protein:vir:78 393 RKVLRWCADMVVSDIALRGLGEY---DSNDICFEIEPHVLANELDIATTRKTEAETEALKIGNIMTVAPRIGDDETLKLI 469 (537) T ss_pred HHHHHHHHHHHHHHHhhcCCccc---ccceeeEEeccCCCCCHHHHHHHHHHHHhcCcchHHHHHHhCCCCCCHHHHHHH Confidence 55566666666666554321111 123456666677889999999999999999999998888876543221000 Q ss_pred ---------eEeeccC--ccc-cccccccccccCC---c-ccCCCCccCCC Q lcl|Aclame:pro 382 ---------KYISSLN--YVF-LDFLEEYQRLKAG---G-AMKGGDNKNEG 416 (416) Q Consensus 382 ---------~~~~~~n--~~~-~~~~~~~~~~~~~---~-~~~gge~~~~~ 416 (416) .+.-..+ ... .+.....++.-.+ + ....+|.+|-+ T Consensus 470 ~ee~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 520 (537) T protein:vir:78 470 AEELDLDYNELKDALAEQDAQSLDVSPDVQAMLDGLPVNANQPPVDPNQPV 520 (537) T ss_pred HHHHHhhhhhhhhhhhhhcccccCcCcchhhhcCCCCCCCCCCCCCccCCC Confidence 0000000 000 0000000000000 0 00001111111 No 218 >protein:vir:9922 Length: 489 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:178 # MgeName: 315.6 # Cross-refs: genbank:acc:NP_795684;genbank:gi:28876464;genbank:GeneID:1257980 Probab=97.15 E-value=0.00015 Score=41.53 Aligned_cols=396 Identities=12% Similarity=0.060 Sum_probs=167.3 Q ss_pred Ccchhhhcccccccc--------------ccccchhHHHhhhcCcccccccccc-----HHHHhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MLLERMFEKRSGSSD--------------HEDGFNNILLNMFGGRKTASGERVS-----ESNSLVQPDIFACVNVLSDDI 61 (416) Q Consensus 1 m~~~~~f~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~a~~~~~v~~~i~~ia~~i 61 (416) |.-..+|.--...+. ....-...+..++-+.......... ...=+..+....+|+..+.-+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~yy~g~~~i~~~~~~~~~~~~~~ki~~n~~~~iv~~~~~~l 80 (489) T protein:vir:99 1 MLQEDFEAIDYESKLWIDQLKNYISRFKAEQLERLKELKRYYLGDNNIKYRPAKTDKYAADNRIASDFAKYITVFEQGYM 80 (489) T ss_pred CCccceeeeCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccccccccCCcceeecchHHHHHHHHhhhh Confidence 111111110000000 0000011122222221100000000 001123566777888888888 Q ss_pred ccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEee----cCCCcEEEEEeeccce Q lcl|Aclame:pro 62 AKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQF----GSHGYPEALFPLRPDY 137 (416) Q Consensus 62 a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r----~~~g~~~~l~~l~p~~ 137 (416) -.-|+.+...+ +. .. ..+..++.. | ....+...+..+++.+|.+|.++.. +..|+ ..+..++|.. T Consensus 81 ~g~~~~~~~~d-~~----~~-~~l~~~~~~-n---~~~~~~~~~~~~~~~~G~~~~~v~~~~~~d~~~~-~~i~~~~p~~ 149 (489) T protein:vir:99 81 LGVPVEYKNEN-KD----LQ-AAIDLMSVR-N---NEDYHNVKIKTDLSIYGRAYELLTVEKIDDKKTE-VKLYQLPAEQ 149 (489) T ss_pred ccCCceeecCC-hh----HH-HHHHHHHhh-c---ChhHHHHHHHHHHhhCCeEEEEEeeccCcCCCcc-eEEEEEcccc Confidence 77777653322 11 11 122223232 2 3346778888999999999988754 33333 4677788888 Q ss_pred EEEEEcCCC--cEE----EEEEeeC-Ce---eE-EechhheeeeccCC------------------------CCcccccc Q lcl|Aclame:pro 138 TNAYVHPTT--GML----WYQTVLN-GK---AI-ELYDYEVLHFKGLS------------------------TDGIHGKS 182 (416) Q Consensus 138 v~~~~~~~~--~~~----~~~~~~~-~~---~~-~~~~~~vih~~~~~------------------------~~~~~G~s 182 (416) +.+..++.. ... +|..... +. .. .+.++.+++++... .+...|.| T Consensus 150 ~~~v~dd~~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~s 229 (489) T protein:vir:99 150 TFVIYDDTYQRNSLMAVHFYDIDYGSGKRKQIIKAYTSDTIYTYEDYNLETKGMRLKDYEGHFFKGVPVNEYANNEERTG 229 (489) T ss_pred eEEEEcCCCCCceEEEEEEEEEecCCCceEEEEEEEeCCcEEEEEecCCCcccceecccccccCCceeEEEeecCCCCCC Confidence 877776433 121 1111111 11 01 12222232222100 01124667 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHH----------hhcCCceeecCCC---- Q lcl|Aclame:pro 183 PIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKR----------VNKVENIAIIDYG---- 248 (416) Q Consensus 183 ~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~----------~~~~~~~~vl~~g---- 248 (416) .+..+...++....+.....+.+...+.|-.+++-... ..+........+.. ....++++.++.+ T Consensus 230 ~~~~v~~liDa~d~~~s~~~~~~~~~~~~~l~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (489) T protein:vir:99 230 AYESVLDNIDAYDLSQSELANFQQDSVNALLVIAGNAY-TGADENDYLDDGRLNPNGRLAISIGFKKAQVLILDDNPNPN 308 (489) T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCc-ccccchhhhhhcccccccccccccccccceeeeeccccCcc Confidence 77666666665555555554444555555444433221 11111111111110 1112333333332 Q ss_pred ---ceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHH------------HHHHHHHHHHHHHHHH Q lcl|Aclame:pro 249 ---LEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIE------------HQSIEYVRNTLQPWIV 313 (416) Q Consensus 249 ---~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e------------~~~~~f~~~~l~P~~~ 313 (416) .+...+........+....+...+.|+..-++|..-... ..++-|... +.....+...|.-+++ T Consensus 309 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~-~~~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~ 387 (489) T protein:vir:99 309 GVKPQAYFLKKEYDTAGSEAYKNRLVADILRFTFTPDTQDMK-FSGVQSGESMKYKLMASDNYREKQERLFKKGLMRRLR 387 (489) T ss_pred ccccceeeeeecCChHHHHHHHHHHHHHHHHHhCCccccccc-ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 233334444445555667788889999999998532211 112222111 1122344445555555 Q ss_pred HHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccc Q lcl|Aclame:pro 314 NFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLD 393 (416) Q Consensus 314 ~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~ 393 (416) .|...+...-...........+.+.++.-+..|..+.++.+.++ .|+++.-.+.++++.=..++.. ..+..+. T Consensus 388 li~~~~~~~~~~~~~~~~~~~i~v~f~~~~p~d~~~~~~~~~kl--~giis~et~~~~l~~v~~~d~~-----~E~~ri~ 460 (489) T protein:vir:99 388 LAANIWAIKGNEATTYSLVNDTSIVFTPNLPQNDNEIVTAAQNL--YGIVSDQTIFEILNTVTGVDAE-----AELKRLK 460 (489) T ss_pred HHHHHHhhcCCccccccccccceEEeCCCCCcCHHHHHHHHHHH--hccCCHHHHHHhcCCCCchhHH-----HHHHHHH Confidence 55554432211111111112345555666788899999999887 4899998888876331101100 0011110 Q ss_pred c-ccccccccC---CcccCCCCccCCC Q lcl|Aclame:pro 394 F-LEEYQRLKA---GGAMKGGDNKNEG 416 (416) Q Consensus 394 ~-~~~~~~~~~---~~~~~gge~~~~~ 416 (416) . .+..+...+ .+...+.++..+. T Consensus 461 ~E~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (489) T protein:vir:99 461 EEADKKQSLPEPRLVGDASGQEEPTAE 487 (489) T ss_pred HHHHHHhccccccccCCCCCCcCCCCC Confidence 0 000000011 0111111111111 No 219 >protein:vir:97376 Length: 320 # NCBI annotation: putative portal protein # Family: family:all:11744 # MgeID: mge:1675 # MgeName: Q54 # Cross-refs: genbank:acc:YP_762589;genbank:gi:115304290;genbank:GeneID:5130579 Probab=94.52 E-value=0.0022 Score=35.14 Aligned_cols=309 Identities=14% Similarity=0.144 Sum_probs=140.2 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.+.+ |++|...+..... .++ -...... +.-..-..-|.+.+-.|..+|.- +-.|+... T Consensus 1 ~~~~~-~~~~~~~~~~~~~---~~~---~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------- 59 (320) T protein:vir:97 1 MGIFN-FKKRETLTPELKE---SII---RQVTIED------ESPFTGTTDFNVRNEVAESIATY-LGAYKTSA------- 59 (320) T ss_pred CCccc-cccccccChhHHh---hhh---heeeecc------CCCcccccccchhhHHHHHHHHH-hhhhcccc------- Confidence 77665 5666544432110 011 1110000 00000011122223333333321 11232211 Q ss_pred ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEEEEEeeC---C Q lcl|Aclame:pro 81 EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLN---G 157 (416) Q Consensus 81 ~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~~~~~~~---~ 157 (416) ....+|. .| ..|++.++.+.+..-..|++.... .|+.+ .+.+++.-. ...+.+..... - T Consensus 60 --~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~--~~~~~~~~~D~FN~~ 121 (320) T protein:vir:97 60 --KRLSLLT--NN-----PSFLRRLVKHALHNKTTYVYKSPT-YGWLI------TDSMTIEGL--RARLTFTLPDPFNSA 121 (320) T ss_pred --ceeeeee--CC-----HHHHHHHHHHhhcccceEEeeCCc-cceee------ecceeeeee--eeeEEEecCccccee Confidence 1123332 22 379999999999988888886422 23211 111111100 00000000000 0 Q ss_pred eeEEechhheeeeccCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCC-----HHHHHHHHHH Q lcl|Aclame:pro 158 KAIELYDYEVLHFKGLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLD-----EKPKENVRKE 232 (416) Q Consensus 158 ~~~~~~~~~vih~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~-----~e~~~~~~~~ 232 (416) ...++|-.++=. -.++++|..+-+ .-.+...+.....+-+.|.+..+..++.+-+.. ++...++++. T Consensus 122 V~mtvpfyD~~I----Ldnpl~gv~tqe----~gkM~g~a~~~v~kkL~~~~~IKafi~Tdid~GLee~kD~~~~kIk~m 193 (320) T protein:vir:97 122 VTMTVPFYDVGI----IDSPLVEVDTEE----ANKMLEAAYSAVMKKLHNTGAIKAFISSDIDVGLEKMKEESDSKIKAM 193 (320) T ss_pred EEEEeeeechhh----hhhhhcccChHH----hhHHHHHHhhhhhhhccccceeEEEEecccchhHHHHHHHHHHHHHHH Confidence 011111111110 123566666552 223344455666677888888999888776432 3333344444 Q ss_pred HHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 233 WKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWI 312 (416) Q Consensus 233 ~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~ 312 (416) .+-+..-.+.-+++.|-+++++.....-.- ..-....+...+.-+++|..+|-+.. .+.+...|+...+.|++ T Consensus 194 q~~A~~~nG~T~i~~~dDI~Qi~pDYS~sn-~~D~~l~~t~alS~y~m~~~IL~GsA------te~~~Iaf~~~~V~PLL 266 (320) T protein:vir:97 194 LATAELLSGYTYIQRGDDVTQMMPDYTTSN-VTDFAAMRTFAASQLSVSDKILDGSA------TDGEKVAVMFRFVEPIL 266 (320) T ss_pred HHHHHHhcCcccccCCcceeeecccccccc-hhHHHHHHHHHHhhcCCchhhccccC------CcceeeehhhHhHHHHH Confidence 333333456888999999998875443221 22334566777888999999986422 25667799999999999 Q ss_pred HHH---HHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCc Q lcl|Aclame:pro 313 VNF---EQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNY 389 (416) Q Consensus 313 ~~i---~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~ 389 (416) +|+ +-.|..++-. ..++.|- .-.|-+..|-+-- .|.+.- T Consensus 267 ~Q~~~~Ek~Lvy~m~~------E~FVs~m-------------------tTGG~l~S~~~~~-~~~~~~------------ 308 (320) T protein:vir:97 267 EQFREYEPSLIYAMRD------EFFVSFM-------------------TTGGMLNSNRVDG-WGKEKA------------ 308 (320) T ss_pred HHhhhcCcceeeeecc------ceeeeee-------------------ecCceeecccccc-cccccC------------ Confidence 997 4444433211 0111110 0034444443211 122211 Q ss_pred cccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 390 VFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 390 ~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) ++..+|||--+- T Consensus 309 --------------~~~~~~~~~~~~ 320 (320) T protein:vir:97 309 --------------PNESKGGDVGDV 320 (320) T ss_pred --------------CccccCCcccCC Confidence 122233322222 No 220 >protein:vir:102239 Length: 527 # NCBI annotation: gp9 # Family: family:all:6920 # MgeID: mge:1648 # MgeName: PBI1 # Cross-refs: genbank:acc:YP_655205;genbank:gi:109522785;genbank:GeneID:4157478 Probab=93.74 E-value=0.0065 Score=32.56 Aligned_cols=390 Identities=12% Similarity=0.038 Sum_probs=178.3 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.-++.- =..+.+- +++..... ..|+...-.+..+..---++-.+..+++...+ +..+.+..+.+ T Consensus 1 ~~~~~~~---~~~~~~~----------~~g~~~~p-~~v~~~d~~Rl~aY~l~~~~y~n~~~~~~~~l-rg~~~~~~r~~ 65 (527) T protein:vir:10 1 MGQDKRQ---YGSTQQL----------RAGEANFP-NAVTDFDKARLASYRLYEDMYLTNTSDYQVIL-RGGDEGDQRPI 65 (527) T ss_pred CCccccc---cCCCcCc----------CCccccCc-ccCCHHHHHHHHHHHHHHHHhcCchhheeeec-CCcccccccee Confidence 5543211 0111111 11110000 00221111111111111122222222222111 11111111222 Q ss_pred ccchhhhhccccc--------------------------cccCHHHHHHHHHHHHHHcCCeEEEEeecC---CCcEEEEE Q lcl|Aclame:pro 81 EHKSAHAVYARPN--------------------------PYMTAFTWKKLMMTHVLTWGNAYSYIQFGS---HGYPEALF 131 (416) Q Consensus 81 ~~~~~~~l~~~PN--------------------------~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~---~g~~~~l~ 131 (416) -+|-...+..+++ .-.++....++...+.+.-|.+...+.++. .|.-..+. T Consensus 66 ~~ps~~~~~~~~~~~~~~g~~~~~~~~~e~v~~~lr~~~~~e~l~~~~~~~~r~~~vlGDg~f~l~wD~~k~~~~R~~v~ 145 (527) T protein:vir:10 66 YVPNGEKLIEAKMRFLGQGLKWEFSKKDAKVDDAIRVLFDRENWEQKFESLKRWTEIRGDYVLLLIGDDEKDEGSRLSLH 145 (527) T ss_pred eehhhHHhhCCcceeeccCccccccchhHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhcceeEEEeeccCCCcCCCceEe Confidence 2222111112211 113455566777777888999999998874 34456777 Q ss_pred eeccceEEEEEcCCCcEEEEEE--e--------------------------eCC-----ee-------EE---------- Q lcl|Aclame:pro 132 PLRPDYTNAYVHPTTGMLWYQT--V--------------------------LNG-----KA-------IE---------- 161 (416) Q Consensus 132 ~l~p~~v~~~~~~~~~~~~~~~--~--------------------------~~~-----~~-------~~---------- 161 (416) .++|..+-+..++++......+ . ..+ +. ++ T Consensus 146 ~~DP~~~f~~ed~d~~~~v~~v~~~~~~~~P~d~~~~~~~ar~~~~~~~l~~~g~~~~~G~~~yt~~~w~lg~w~d~~e~ 225 (527) T protein:vir:10 146 EVDPSTYFPYEDPRYPGQVLGVYLVDEYPHPDSEKKNEKCARVQKYMKTLDDDGKPVPGGAIKYTEELYEPGKWDDRPES 225 (527) T ss_pred ecCcceeeeeecCCCCCceeeEEEeeeccCCccccccceehhhhhhhhhcCcccccccCcceeeeeceeecccccccccc Confidence 7777777666665432111000 0 000 00 00 Q ss_pred ----------------------echhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC Q lcl|Aclame:pro 162 ----------------------LYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP 218 (416) Q Consensus 162 ----------------------~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~ 218 (416) +.-=.|+|+++. ..+...|.|.+.-+...++.......-.....+-++.|-.+++.- T Consensus 226 p~~~~~~~~~~~~~~l~~lp~pi~fiPvV~~~t~p~~~~~WG~S~La~ll~l~deLn~~~Td~s~is~~sG~Pi~~~tg~ 305 (527) T protein:vir:10 226 PLEPDDIKKLSTLTEEEPLPEQITTLPVFHFRGHPIMNAMFGRSGLAGLESLIASVNQTMTDEDLIMVFGGLGFYATDSA 305 (527) T ss_pred ccchhhhhhhcCceeeecccCCCCccceEeecCCCccccccChhhHhHHHHHHHHHhhhhhHHHHHHHHhCCceeeeccc Confidence 001136677643 345678999887666666655444444444445566665555432 Q ss_pred CcCCHHHHHHHHHHHHHhh-cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHH Q lcl|Aclame:pro 219 AFLDEKPKENVRKEWKRVN-KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIE 297 (416) Q Consensus 219 ~~~~~e~~~~~~~~~~~~~-~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e 297 (416) ...+ .+-...... ..|.++=|+++.++..++..++-..+........+.|+..-++|..-+|..+.++.- +. T Consensus 306 ~~vd------~~G~~~~~~VgPG~iweL~e~ak~~~v~~~~~la~~~~h~~~L~~~l~~vA~~PavA~G~vD~s~~~-SG 378 (527) T protein:vir:10 306 PPRD------SRGNMVPWTISPLGMVEHGQNNKIYRVNGVASLEPSQTHMNKAEEAMQQTKGIPDIAVGVVDAAVAE-SG 378 (527) T ss_pred cccc------ccCCcCccccCCceeEecCCCcceeeccchhhhHHHHHHHHHHHHHHHHhhcCCeeeeccccCCcCc-HH Confidence 2221 011111111 234456689999999888766666677778888999999999999999966644311 11 Q ss_pred HHHHHHHHHHHHHHHHHHHHH-------HHH-------hhc------CchhcccccchhhhhhhhhhccHHHHHHHHHHH Q lcl|Aclame:pro 298 HQSIEYVRNTLQPWIVNFEQE-------LNV-------KLF------LDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTL 357 (416) Q Consensus 298 ~~~~~f~~~~l~P~~~~i~~~-------l~~-------~l~------~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~ 357 (416) .-+.-.+.|++..-+.. +-+ .++ .-........+.+.+...+..|.+...+...++ T Consensus 379 ----~ALeL~L~PLlar~~rk~L~~~~Vqrq~~~~~~~~~L~aye~v~~~d~~~~~~v~ivf~p~lP~D~~avie~v~tL 454 (527) T protein:vir:10 379 ----IALDLKLSAILSSCAEQELELKSVLKQFFYNLVTQWLPAYEGVGIDDADKKLTVTITFRDPKPVNNEKRFAQLLEL 454 (527) T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhcccCCCccccceEEEecccCCCCHHHHHHHHHHH Confidence 11222344443322211 110 011 101111112335556677899999999999999 Q ss_pred HhCCCcCHHHHHHHh---CCCCCCCCC--eEeeccCccccccccccccccCCcccCC----CCccCCC Q lcl|Aclame:pro 358 HETGVLNKDEIRELL---ERNPIENGD--KYISSLNYVFLDFLEEYQRLKAGGAMKG----GDNKNEG 416 (416) Q Consensus 358 ~~~g~~t~NE~R~~~---gl~p~~ggd--~~~~~~n~~~~~~~~~~~~~~~~~~~~g----ge~~~~~ 416 (416) +.+|+++.-=+-++| |.-..+.-+ ++.--.-...+..++............| ++.|+.| T Consensus 455 ~~aGiiS~etAv~~L~~~~g~eD~E~E~~~I~~era~~a~a~a~a~~~~~a~~~~~~g~~~~~~d~~~ 522 (527) T protein:vir:10 455 WEAGLIPAKKLTEELSKIMGFELTEEDFRQATEDKKTQGIAQAEAADPFGAQMAAEQGIPDEEDDQAL 522 (527) T ss_pred HHcCchhHHHHHHHHHhccCCCchHHHHHHHHHHHHHHhHHhhhhcCchhhhhccccCCCCCCccccc Confidence 999999999888887 221122211 1100000001111111111111111111 3344444 No 221 >protein:vir:101494 Length: 527 # NCBI annotation: gp9 # Family: family:all:6920 # MgeID: mge:1627 # MgeName: PLot # Cross-refs: genbank:acc:YP_655388;genbank:gi:109522576;genbank:GeneID:4157566 Probab=93.72 E-value=0.0066 Score=32.54 Aligned_cols=390 Identities=12% Similarity=0.040 Sum_probs=178.3 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKP 80 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~ 80 (416) |.-++.- =..+.+- +++..... ..|+...-.+..+..---++-.+..+++...+ +..+.+..+.+ T Consensus 1 ~~~~~~~---~~~~~~~----------~~g~~~~p-~~v~~~d~~Rl~aY~l~~~~y~n~~~~~~~~l-rg~~~~~~r~~ 65 (527) T protein:vir:10 1 MGQDKRQ---YGSTQQL----------RAGEANFP-NAVTDFDKARLASYRLYEDMYLTNTSDYQVIL-RGGDEGDQRPI 65 (527) T ss_pred CCccccc---cCCCcCc----------CCccccCc-ccCCHHHHHHHHHHHHHHHHhcCchhheeeec-CCcccccccee Confidence 5543211 0111111 11110000 00221111111111111122222222222111 11111111222 Q ss_pred ccchhhhhccccc--------------------------cccCHHHHHHHHHHHHHHcCCeEEEEeecC---CCcEEEEE Q lcl|Aclame:pro 81 EHKSAHAVYARPN--------------------------PYMTAFTWKKLMMTHVLTWGNAYSYIQFGS---HGYPEALF 131 (416) Q Consensus 81 ~~~~~~~l~~~PN--------------------------~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~---~g~~~~l~ 131 (416) -+|-...+..+++ .-.++....++...+.+.-|.+...+.++. .|.-..+. T Consensus 66 ~~ps~~~~~~~~~~~~~~g~~~~~~~~~e~v~~~lr~~~~~e~l~~~~~~~~r~~~vlGDg~f~l~wD~~k~~~~R~~v~ 145 (527) T protein:vir:10 66 YVPNGEKLIEAKMRFLGQGLKWEFSKKDAKVDDAIKVLFDRENWEQKFESLKRWTEIRGDYVLLLIGDDEKDEGSRLSLH 145 (527) T ss_pred eehhhHHhhCCcceeeccCccccccchhHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhcceeEEEeeccCCCcCCCceEe Confidence 2222111112211 113455566777777888999999998874 34456777 Q ss_pred eeccceEEEEEcCCCcEEEEEE--e--------------------------eCC-----ee-------EE---------- Q lcl|Aclame:pro 132 PLRPDYTNAYVHPTTGMLWYQT--V--------------------------LNG-----KA-------IE---------- 161 (416) Q Consensus 132 ~l~p~~v~~~~~~~~~~~~~~~--~--------------------------~~~-----~~-------~~---------- 161 (416) .++|..+-+..++++......+ . ..+ +. ++ T Consensus 146 ~~DP~~~f~~ed~d~~~~v~~v~~~~~~~~P~d~~~~~~~ar~~~~~~~l~~~g~~~~~G~~~yt~~~w~lg~w~d~~e~ 225 (527) T protein:vir:10 146 EVDPSTYFPYEDPRYPGQVLGVYLVDEYPHPDSEKKNEKCARVQKYMKTLDDDGKPVPGGAIKYTEELYEPGKWDDRPES 225 (527) T ss_pred ecCcceeeeeecCCCCCceeeEEEeeeccCCccccccceehhhhhhhhhcCcccccccCcceeeeeceeecccccccccc Confidence 7777777666665432111000 0 000 00 00 Q ss_pred ----------------------echhheeeeccC-CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC Q lcl|Aclame:pro 162 ----------------------LYDYEVLHFKGL-STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP 218 (416) Q Consensus 162 ----------------------~~~~~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~ 218 (416) +.-=.|+|+++. ..+...|.|.+.-+...++.......-.....+-++.|-.+++.- T Consensus 226 p~~~~~~~~~~~~~~l~~lp~pi~fiPvV~~~t~p~~~~~WG~S~La~ll~l~deLn~~~Td~s~is~~sG~Pi~~~tg~ 305 (527) T protein:vir:10 226 PLEPDDIKKLSTLTEEEPLPEQITTLPVFHFRGHPIMNAMFGRSGLAGLESLIASVNQTMTDEDLIMVFGGLGFYATDSA 305 (527) T ss_pred ccchhhhhhhcCceeeecccCCCCccceEeecCCCccccccChhhHhHHHHHHHHHhhhhhHHHHHHHHhCCceeeeccc Confidence 001136677643 345678999887666666655444444444445566665555432 Q ss_pred CcCCHHHHHHHHHHHHHhh-cCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHH Q lcl|Aclame:pro 219 AFLDEKPKENVRKEWKRVN-KVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIE 297 (416) Q Consensus 219 ~~~~~e~~~~~~~~~~~~~-~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e 297 (416) ...+ .+-...... ..|.++=|+++.++..++..++-..+........+.|+..-++|..-+|..+.++.- +. T Consensus 306 ~~vd------~~G~~~~~~VgPG~iweL~e~ak~~~v~~~~~la~~~~h~~~L~~~l~~vA~~PavA~G~vD~s~~~-SG 378 (527) T protein:vir:10 306 PPRD------SRGNMVPWTISPLGMVEHGQNNKIYRVNGVASLEPSQTHMTKAEEAMQQTKGIPDIAVGVVDAAVAE-SG 378 (527) T ss_pred cccc------ccCCcCccccCCceeEecCCCcceeeccchhhhHHHHHHHHHHHHHHHHhhcCCeeeeccccCCcCc-HH Confidence 2221 011111111 234456689999999888766666677778888899999999999999966644311 11 Q ss_pred HHHHHHHHHHHHHHHHHHHHH-------HHH-------hhc------CchhcccccchhhhhhhhhhccHHHHHHHHHHH Q lcl|Aclame:pro 298 HQSIEYVRNTLQPWIVNFEQE-------LNV-------KLF------LDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTL 357 (416) Q Consensus 298 ~~~~~f~~~~l~P~~~~i~~~-------l~~-------~l~------~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~ 357 (416) .-+.-.+.|++..-+.. +-+ .++ .-........+.+.+...+..|.+...+...++ T Consensus 379 ----~ALeL~L~PLlar~~rk~L~~~~vqrq~~~~~~~~~L~aye~v~~~d~~~~~~v~ivf~p~lP~D~~avie~v~tL 454 (527) T protein:vir:10 379 ----IALDLKLSAILSSCAEQELELKSVLKQFFYNLVTQWLPAYEGVGIDDADKKLTVTITFRDPKPVNSEKRFNQLLQL 454 (527) T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhcccCCCccccceEEEecccCCCCHHHHHHHHHHH Confidence 11222344443322211 110 011 101111112335556677899999999999999 Q ss_pred HhCCCcCHHHHHHHh---CCCCCCCCC--eEeeccCccccccccccccccCCcccCC----CCccCCC Q lcl|Aclame:pro 358 HETGVLNKDEIRELL---ERNPIENGD--KYISSLNYVFLDFLEEYQRLKAGGAMKG----GDNKNEG 416 (416) Q Consensus 358 ~~~g~~t~NE~R~~~---gl~p~~ggd--~~~~~~n~~~~~~~~~~~~~~~~~~~~g----ge~~~~~ 416 (416) +.+|+++.-=+-++| |.-..+.-+ ++.--.-...+..++............| ++.|+.| T Consensus 455 ~~aGi~S~~tAv~~L~~~~g~eD~E~E~~~I~~era~~a~a~a~A~~~~~a~~~~~~g~~~~~~d~~~ 522 (527) T protein:vir:10 455 WEAGLIPAKKLTEELSKIMGFELTEEDFKQATEDKKTQGIAQAEAADPFGAQMAAEQGIPDEEDDQAL 522 (527) T ss_pred HHcCchhHHHHHHHHHhccCCCChHHHHHHHHHHHHHHhHHhhhhcCchhhhhccccCCCCCCccccc Confidence 999999999888887 221122211 1110000001111111111111111111 3344444 No 222 >protein:vir:105154 Length: 525 # NCBI annotation: conserved phage-related protein # Family: family:all:6660 # MgeID: mge:1466 # MgeName: C-St # Cross-refs: genbank:acc:YP_398597;genbank:gi:80159853;genbank:GeneID:3772992 Probab=91.80 E-value=0.014 Score=30.72 Aligned_cols=402 Identities=13% Similarity=0.099 Sum_probs=163.6 Q ss_pred Ccch--hhhccccccccccccc-hhHHHhhhcCccccccccccHHHHhccH-------------------HHHHHHHHHH Q lcl|Aclame:pro 1 MLLE--RMFEKRSGSSDHEDGF-NNILLNMFGGRKTASGERVSESNSLVQP-------------------DIFACVNVLS 58 (416) Q Consensus 1 m~~~--~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~-------------------~v~~~i~~ia 58 (416) |+=. |... ...+..+.| +..++++++.+-...-..-+...+..+| .|+...++ T Consensus 27 ~~n~~~~~y~---ty~~~~~~f~~gfv~~~~~ng~i~~v~~~~l~~~f~npd~~~~~i~~l~~y~yi~~~~v~ql~~l-- 101 (525) T protein:vir:10 27 HINELERQYN---TYDDVVDAFIDGFVMDLCNNGKIKTVNLDTLQLWFNNPDKYINNIVNLLTYYYIIDGNVFQLYDL-- 101 (525) T ss_pred HHhhhhhhcc---hhhhHHHHHHHHHHHHhhcCCceeeeeHHHHHhhhcChHHHHHHHHHHHHHhhhhcchHHHHHHH-- Confidence 2200 0000 000000000 1112222222111000000011111222 23333333 Q ss_pred HhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEE-----EEE-- Q lcl|Aclame:pro 59 DDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPE-----ALF-- 131 (416) Q Consensus 59 ~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~-----~l~-- 131 (416) |-++|---|+.+--.+.+..+.+ ..++|..-..-.-..++-+-+..++...|.-.- +.-...-.|. ++- T Consensus 102 --i~~lp~l~y~i~~~~~~k~~~~~-~s~~n~~l~k~i~hk~ltrdll~q~a~~gtlig-~wlg~~~~py~~vf~~~kyv 177 (525) T protein:vir:10 102 --IFSLPPLDYQIKVLKRDKDYKED-LSTINLYLEKKIQHKQLTRDLLVQLAHSGTLIG-TWLGSKREPYFNVFNNLKYV 177 (525) T ss_pred --HHhcCCcceeehhhhhccchhhH-HHHHHHHHHHhHHHHHHHHHHHHHhhccCceeE-eeecCCCCcchhhhhhhhhh Confidence 33444333333221111111111 122322222211222222222222222232110 0000000010 000 Q ss_pred ----eeccceEEEEE--------cCC---------------CcEEEEEEeeCC----eeEEechhheeeeccC--CCCcc Q lcl|Aclame:pro 132 ----PLRPDYTNAYV--------HPT---------------TGMLWYQTVLNG----KAIELYDYEVLHFKGL--STDGI 178 (416) Q Consensus 132 ----~l~p~~v~~~~--------~~~---------------~~~~~~~~~~~~----~~~~~~~~~vih~~~~--~~~~~ 178 (416) .-...+|.+.- +.. ....+-.|...+ ....+|-+.++|+|.. +.+.. T Consensus 178 fp~~r~~g~~v~vid~~~f~~~~~~~r~~~~~~lsp~i~~~~y~~~~~~~~~~~~~~r~i~LP~e~t~~lr~~tl~rnqr 257 (525) T protein:vir:10 178 FPYGRAKGKMVAVIDLQWFDEMSELERKLTFENLSPLITENKYKKWKEYNGENEDALRYIMLPISKTLVARIHTLSRNQR 257 (525) T ss_pred ccccccCCceEEEEehHHhhhhhHHHHHHHHHhhchhhhhhhhhHHhhcccccchhheeeecccceeEEeeecccccCcc Confidence 00111111110 000 000000111111 1246788999999954 44566 Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCC-----HH-HHHH----HHHHHHH-hhcCCceeec-- Q lcl|Aclame:pro 179 HGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLD-----EK-PKEN----VRKEWKR-VNKVENIAII-- 245 (416) Q Consensus 179 ~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~-----~e-~~~~----~~~~~~~-~~~~~~~~vl-- 245 (416) -|.|....+...+.......+...+....=..|-.++++.+... ++ ..++ .+...++ .....+++|+ T Consensus 258 lG~s~vtp~l~dI~hk~klrd~EqsIA~kii~a~avLk~gg~~gn~mk~p~~~kqkil~gVk~aleK~~kdK~Gi~vi~~ 337 (525) T protein:vir:10 258 LGIPYGTQTLFDIQHKQKLRDLEQSIADKIIKAMAVLKFRGKDDNDSKVKESAKRKVLAGVKRALEKGVKDKNGIACIAM 337 (525) T ss_pred cCcchhhhHHHHHHHHHHHHHHHHHHHHHhhhhheeeeeccccCccccCchHHHHHHHHHHHHHHhcccccccCeEEEec Confidence 68998888888888888888888877777777888888765432 22 2223 3344443 2223345553 Q ss_pred CCCc--eeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 246 DYGL--EYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQPWIVNFEQELNVKL 323 (416) Q Consensus 246 ~~g~--~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P~~~~i~~~l~~~l 323 (416) |.=+ +|-.+.....-++ -.-.+....+|-.++|++-+++++. ++||+++.-.+.-||.. |.=+++.|++..+ +| T Consensus 338 Pdfa~~efp~ik~~~~glD-g~K~d~I~~DI~~A~GlS~sL~nGd-ggNyAtaslnld~fykk-igVm~e~Iee~y~-kL 413 (525) T protein:vir:10 338 PDFATFEFPEIKNGDKTLD-PKKYDSIDNDITNATGISQVLTNGT-KGNYASAKLNLDVFYKK-IGVMLEIIEEIYN-QL 413 (525) T ss_pred cceeecccccccCcccCCC-chhhhhhhhhhhhhhccceeeecCC-CCceeeeeeeHHHHHHH-HHHHHHHHHHHHH-HH Confidence 3322 3323322111111 0122445678999999999998754 46888877777788876 7788888885544 44 Q ss_pred cC-chhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC------------CC-eEeeccC- Q lcl|Aclame:pro 324 FL-DHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN------------GD-KYISSLN- 388 (416) Q Consensus 324 ~~-~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g------------gd-~~~~~~n- 388 (416) +. -.....+.-+.|+++.-...+.+.+.+..-++...|+...- +-...|+.-.|. .+ +.+-|.+ T Consensus 414 ~d~Vl~~~k~~nyifnydkd~pi~~kkk~d~LIkL~d~g~s~k~-vldl~gis~e~y~E~s~yEtE~lkl~EKi~pp~~~ 492 (525) T protein:vir:10 414 IDIILGEEKGCNYIFQYNKDTPIEREKKLDTLIKLEAQGYSAKY-VLDILGISSEEYFEESIYEIEKLKLREKIMPPLNT 492 (525) T ss_pred HhhhcCcccCcceEEecCCCchhhhhhhhhhhhhhhccchhhhh-hhhhhccCcchHHHHHHHHHHHHHHhhhccccccc Confidence 31 11123344455666666667788888888888877774322 222333321110 11 1111111 Q ss_pred -cccc---ccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 389 -YVFL---DFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 389 -~~~~---~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) .... .+.+.+...+..++...-+..+.| T Consensus 493 ~v~SGk~~n~iG~P~~dd~~~~dati~s~~~~ 524 (525) T protein:vir:10 493 NVLSGKDGNDIGSPKLDDSDSSDATIESKERG 524 (525) T ss_pred eeeeccccccccCCccCCCcchhhhhhhhhcC Confidence 1111 011111111110111111112222 No 223 >protein:vir:95149 Length: 501 # NCBI annotation: hypothetical protein ORF007 # Family: family:all:584 # MgeID: mge:1552 # MgeName: PA73 # Cross-refs: genbank:acc:YP_001293414;genbank:gi:148912835;genbank:GeneID:5228224 Probab=91.21 E-value=0.017 Score=30.29 Aligned_cols=387 Identities=12% Similarity=0.039 Sum_probs=154.2 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--cccc---------c------cHHHHh----ccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SGER---------V------SESNSL----VQPDIFACVNVLSD 59 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------~------~~~~a~----~~~~v~~~i~~ia~ 59 (416) |= ..=.++....... .-...+.+..+|.... .+.. . ....++ -.+++.+.++.+.. T Consensus 1 m~--~V~~~hp~y~~~~-~~W~~ird~~~G~~~~r~~g~~YLP~~~~e~~~~e~~~~Y~~rl~rA~~~n~~~~t~~~l~G 77 (501) T protein:vir:95 1 MP--NVSFIRPELGKLL-PLYYLIRDAIAGEPTVKGARTTYLPMPNAEDQSKENKARYEAYLKRAVFYNVARRTLFGLVG 77 (501) T ss_pred CC--CCCCCCHHHHHHH-HHHHHHHHHhcChHHHHhcccccCcCCCCCCCcccchHHHHHHhhccccCchHHHHHHHHhh Confidence 21 0000000000000 0112233333332210 0000 0 011222 23334444444444 Q ss_pred hhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCc------------- Q lcl|Aclame:pro 60 DIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGY------------- 126 (416) Q Consensus 60 ~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~------------- 126 (416) .+.+-+..+- ....+..++-+---..-+-.+|.+.++...+.+|.+++++..+..+. T Consensus 78 ~vf~k~p~~~----------~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~~~~t~a~~~~~~ 147 (501) T protein:vir:95 78 QVFMRDPVVK----------VPALLNPLVANATGSGINLTQLAKRAVSLNLAYSRAGLLVDYPTTEAEGGASIADLEAGR 147 (501) T ss_pred hhhcCCccee----------CcHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeecCCCCcccccHHHHHhcc Confidence 4443333220 11122233322223556889999999999999999999997654321 Q ss_pred --EEEEEeeccceEEEE--------------------EcCCC-------------------cEEEEEEeeCCe----eEE Q lcl|Aclame:pro 127 --PEALFPLRPDYTNAY--------------------VHPTT-------------------GMLWYQTVLNGK----AIE 161 (416) Q Consensus 127 --~~~l~~l~p~~v~~~--------------------~~~~~-------------------~~~~~~~~~~~~----~~~ 161 (416) | .+..+.|..+--+ ...++ ...+..+..... .+. T Consensus 148 ~rP-y~~~~~~~~IinW~~~~v~g~~~l~~v~l~E~~~~~d~~f~~~~~~q~RvL~~~~~g~~~~~v~r~~~~~~~~~~~ 226 (501) T protein:vir:95 148 IRP-TLYVYSPTEIINWRTTDRGAEEVLSLVVLFETWCAADDGFEMKTSGQFRVLRLDEEGYYVHEIWREPQPTKADGSK 226 (501) T ss_pred CCc-EEEEecHhhhcCcceeccCCceeeeEEEEEEEEeecCCCcccceeEEEEEEeeCCCceEEEEEEEecCCcccCcce Confidence 2 1222233211000 00111 111111100000 000 Q ss_pred echh------------------heeeec---cCCCCccccccHHHHHHH-HHHHHHHHHHHHHHHHhccCCcceeeccCC Q lcl|Aclame:pro 162 LYDY------------------EVLHFK---GLSTDGIHGKSPIGVVRE-HIGAQAAATKYNAKLYKNEATPRGILKVPA 219 (416) Q Consensus 162 ~~~~------------------~vih~~---~~~~~~~~G~s~~~~~~~-~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~ 219 (416) +... ..|-|. ........+.+|+..++. .+.......++. ..+...+.|-.+++--. T Consensus 227 ~~~~~~~~~~~~~~~~~g~~~l~~IPfv~~~~~~~~~~~~~pPLl~lA~lni~hy~~ssd~~-~~l~~~~~P~l~i~G~~ 305 (501) T protein:vir:95 227 IPKGNYQQYVVYKPTDAQGKRLTEIPFMFIGSENNDSNPDNPNFYDLASLNMAHYRNSADYE-ESCYIVGQPTPVLIGLT 305 (501) T ss_pred ecCCcccccceeeeeccCCCcCCeeeEEEEecCCCCCCCCccchHHHHHHHHHHHhhhhHHH-HHHHHcccceeeeeCCc Confidence 0000 011111 111122446677765553 333333333333 34555567777665322 Q ss_pred cCCHHHHHHHHHHHHH-hhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHH Q lcl|Aclame:pro 220 FLDEKPKENVRKEWKR-VNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEH 298 (416) Q Consensus 220 ~~~~e~~~~~~~~~~~-~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~ 298 (416) . +..+...+ .. ...++..+.++.|.++.-+..+++-+. .+.++....++.. .| ..++......-.+.... T Consensus 306 ~---~~~~~~~~--~~i~~G~~~~~~lP~~~~~~~ie~~~~~i~-~~~l~~l~~~m~~-~G--a~ll~~~~~~~Ta~~~~ 376 (501) T protein:vir:95 306 E---EWVTNVLK--GSVNFGSRGGIPLPVGADAKLLQASENTML-KEAMDTKERQMVA-LG--AKLVEQKEVQRTATEAE 376 (501) T ss_pred c---cccccCCC--CceeecccccccCCCCCceeEEecChhhHH-HHHHHHHHHHHHH-HH--HhhccCCccchhHHHHH Confidence 1 11110000 00 112345667777766655555554433 2334433444333 23 23332221111122222 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC--chhc--ccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCC Q lcl|Aclame:pro 299 QSIEYVRNTLQPWIVNFEQELNVKLFL--DHDQ--KSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLER 374 (416) Q Consensus 299 ~~~~f~~~~l~P~~~~i~~~l~~~l~~--~~~~--~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl 374 (416) ....-.+..|.-++.++++.+++.|-- .... ..+..|+.+.+=.........++++.+++++|.++..+.++.+-. T Consensus 377 ~~~~~~~S~L~~~a~~le~al~~~l~~~a~w~g~~~~~~~v~i~~df~~~~~~~~~~~al~~~~~~G~is~~t~~~~L~~ 456 (501) T protein:vir:95 377 LEAASEGSTLSSATKNVSAAFEWALKWAARWVGQADSGVKFELNTDFDIARMTPDERRSLVEEWQKGAITFEEMRTGLRK 456 (501) T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEecccccccCCHHHHHHHHHHHhCCCCcHHHHHHHHHh Confidence 333444566777888888888775421 1111 122344444442333333455677888999999999999887633 Q ss_pred CCCCCCC---e---Ee-eccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 375 NPIENGD---K---YI-SSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 375 ~p~~ggd---~---~~-~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) --++..| + +- ..-+..+.+ +....+....||+|-..+ T Consensus 457 ~~v~~~~~~~e~e~i~~~~~~~~~~~-----~~~~~~~~~~gg~~~~~~ 500 (501) T protein:vir:95 457 AGVATEDDSKAKEKIAKDTAEAMALA-----TPANVPGDGSGGDNVGNS 500 (501) T ss_pred CCCCChhHHHHHHHHHhhhcCccccc-----ccCCCCCCCcccccccCC Confidence 3222110 0 00 000010111 111223344566663333 No 224 >protein:vir:80453 Length: 535 # NCBI annotation: BcepGomrgp05 # Family: family:all:584 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210225;genbank:gi:146329917;genbank:GeneID:5123562 Probab=90.80 E-value=0.019 Score=30.02 Aligned_cols=392 Identities=11% Similarity=0.049 Sum_probs=145.2 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc--cc---------c---ccc---HH----HHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA--SG---------E---RVS---ES----NSLVQPDIFACVNVLSD 59 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~---~~~---~~----~a~~~~~v~~~i~~ia~ 59 (416) |= .+=.++........ -...+.+..+|.... .+ . .-+ .. .|.-.+++...++.++. T Consensus 32 m~--dV~~~hp~y~a~~~-~W~~ird~~~G~~~~r~~g~~YLP~~~~~~~~~E~~~~Y~~rl~rA~~~n~~~~tl~~l~G 108 (535) T protein:vir:80 32 LP--NVGYQRVEFGEMLP-KWRKIMDCLSGQEAIKAKREEYLPMPSVDSRDEEQRRRYETYLQRAIFYNVTARTLDGMMG 108 (535) T ss_pred CC--CCCcCCHHHHHHHH-HHHHHHHHhcChHHHHhcccccCCCCCcccCCcCCHHHHHHHHhhccCCChhHHHHHHHhc Confidence 21 00000000000000 111222222221110 00 0 000 11 12233444555555554 Q ss_pred hhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEE----------- Q lcl|Aclame:pro 60 DIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPE----------- 128 (416) Q Consensus 60 ~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~----------- 128 (416) .+.+-+..+ .....+..++-+---..-+-.+|.+.++...+.+|.+++++..+..|.+. T Consensus 109 ~vfrk~p~~----------~~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~iLVD~P~~~~~~t~ade~~~~~r 178 (535) T protein:vir:80 109 QVFSRDPIR----------QLPPALEAIVEDIDGEGVSLDQQAKKALGYTMGFGRAAIFTDYPNVGRPVTVLEQKLGLYR 178 (535) T ss_pred hhhcCCcce----------eccHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeecCCCCcccHHHHHhcCCC Confidence 444444322 01112223332222355688999999999999999999999876554320 Q ss_pred -EEEeeccceEE----------------------EEEc-CCCcEE--EEEEe-e-------------CCee-------EE Q lcl|Aclame:pro 129 -ALFPLRPDYTN----------------------AYVH-PTTGML--WYQTV-L-------------NGKA-------IE 161 (416) Q Consensus 129 -~l~~l~p~~v~----------------------~~~~-~~~~~~--~~~~~-~-------------~~~~-------~~ 161 (416) .+..+.|..|- ...+ ..+... .|++. . .++. .. T Consensus 179 Py~~~y~ae~IinW~~~~v~G~~~Lt~v~lrE~~~~~dd~f~~~~~~q~RvL~~~~~G~y~v~~~~~~~~~~~~~~~~~~ 258 (535) T protein:vir:80 179 PTITLVHPTSIINWRTKLVGGKSVISLVVIQENVLAQDDGFETTYVQQWRVLQLNAEGNYQVERWRRETQEEMYYSYSKH 258 (535) T ss_pred cEEEEechhhccCccccccCCccceeEEEEEEEEEecCCCcccceeEEEEEEEecCCceEEEEEEEeecCCcccccccee Confidence 12211111110 0111 111111 01110 0 0000 00 Q ss_pred echh------hee---eeccCCCCccccccHHHHHHH-HHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHH Q lcl|Aclame:pro 162 LYDY------EVL---HFKGLSTDGIHGKSPIGVVRE-HIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRK 231 (416) Q Consensus 162 ~~~~------~vi---h~~~~~~~~~~G~s~~~~~~~-~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~ 231 (416) ++.+ ..| .+-....+...|.+|+..++. .+........+ ...+...+.|-.+++-.....++.. .+ T Consensus 259 ~~~~~g~~~l~~IPfv~~~~~~~~~~~~~pPLl~LA~lni~Hy~~ssd~-~~il~~~~~P~l~i~G~~~~~~~~~---~~ 334 (535) T protein:vir:80 259 VPTDGNGNPFKEIPFQFIGPLDNNADIDHPPLLDLCEVNIGHYRNSADY-EEMAFVAGQPTAFFTGLTKDWVEDV---FK 334 (535) T ss_pred ecccCCCcccCeeEEEEeecCCCCCCCCccchHHHHHHHHHHhhchhHH-HHHHHHhcCceeeeecCchhhhhcC---CC Confidence 1101 111 111111223457777765554 34433444443 3445556677777763322111100 00 Q ss_pred HHHHh-hcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc-ccHHHHHHHHHHHHHH Q lcl|Aclame:pro 232 EWKRV-NKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF-SNIEHQSIEYVRNTLQ 309 (416) Q Consensus 232 ~~~~~-~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~-s~~e~~~~~f~~~~l~ 309 (416) -... ..++..+.++++.++.-+..+++-+. .+.++....+++. .| ..++.. ..++. ++.......=....|. T Consensus 335 -~~~i~iG~~~~~~lP~~~~~~~~e~~~~~~a-~~~l~~~e~qM~~-lG--a~ll~~-~~~~~Ta~~a~~~~~~~~S~L~ 408 (535) T protein:vir:80 335 -DFKVHLGSRAIIPLPQGATAGILQITPNSVP-FEAMTHKESQMIA-MG--ANLLVK-SGGNRTFGEAQQEEASEQSILS 408 (535) T ss_pred -CcceEecCcccccCCCCCCcceeeeccchhH-HHHHHHHHHHHHH-HH--HHhhcc-CcccccHHHHHHHHHHHhHHHH Confidence 0001 12345667877765544444343322 2233333333322 22 222211 11111 1111112222345566 Q ss_pred HHHHHHHHHHHHhhcCchhcc------cccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCC-----C Q lcl|Aclame:pro 310 PWIVNFEQELNVKLFLDHDQK------SGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPI-----E 378 (416) Q Consensus 310 P~~~~i~~~l~~~l~~~~~~~------~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~-----~ 378 (416) -++..+++.+++.|--...+. ....|..+.+=...........++.+++++|.++....++.+..--+ + T Consensus 409 ~~a~~le~al~~aL~~~A~w~G~~~~~~~~~i~~n~dF~~~~ld~~~~~all~~~~~G~Is~et~~~~L~r~gvl~~~~~ 488 (535) T protein:vir:80 409 ACTKNVSMAFRKALRWANQFQTGIVNDETVEYNLNTDFPAARLTPNERAELILEWQQGAITFKEMRAGLRRAGVASEDDA 488 (535) T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccCCCceEEEeccccccccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCCCCcccc Confidence 777888888876542111110 11223333222222223345666778899999999988887633221 1 Q ss_pred CCCeEe-eccC--ccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 379 NGDKYI-SSLN--YVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 379 ggd~~~-~~~n--~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) +-++.- +-.. ..+.. ++.......+++...+-++++| T Consensus 489 ~eee~~ri~~E~~~~~~~-~g~~~d~~~~g~~~~~~~~~~~ 528 (535) T protein:vir:80 489 KAETEGKATVEFIAKTAA-AGKVGDAASGGTNKAKLNNGNG 528 (535) T ss_pred hHHHHHHHHhhhhhcccc-CCCCCCCCCCCCCcCcccCCcc Confidence 111100 0000 00000 0000001111111112222222 No 225 >protein:vir:102330 Length: 451 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529555;genbank:gi:90592641;genbank:GeneID:3974462 Probab=90.42 E-value=0.021 Score=29.79 Aligned_cols=370 Identities=8% Similarity=-0.033 Sum_probs=166.5 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcc-------cc----ccccccHHHHhccHHHHHHHHHHHHhhccCcceEE Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRK-------TA----SGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTY 69 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~ 69 (416) ++- ++..+....... ...+..++.+-. .. ......+..-+.+....-+|+..+.-+-+-|+... T Consensus 5 ~i~-~~i~~~~~~~~r----~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~~yl~G~p~~~~ 79 (451) T protein:vir:10 5 KIR-AIISADAARRQE----ILQAKSYYYNKNDILKKGVVVQNRDENPLRNADNRISHNFHEILVDEKASYMFTYPVLFD 79 (451) T ss_pred HHH-HHHHHHHHHHHH----HHHHHHHhcccCccccccccccccccccccccccccccchHHHHHHhhhhheecccceee Confidence 111 111100000000 000111111100 00 00000011112245667788888888888887643 Q ss_pred eecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCC-------cEEEEEeeccceEEEEE Q lcl|Aclame:pro 70 KRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHG-------YPEALFPLRPDYTNAYV 142 (416) Q Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g-------~~~~l~~l~p~~v~~~~ 142 (416) ..+++... ..+..+. . | ........+..+.+.+|.||.++.+++.. ....+..++|..+-+.. T Consensus 80 ~~~~~~~~-----~~~~~~~-~-n---~~~~~~~~~~~~~~~~G~a~~~~y~de~~~~~~~~~~~~~~~~i~p~~~~~vy 149 (451) T protein:vir:10 80 IDNNKELN-----EKVTDVL-G-N---EFTRKAKNLAIEASNCGSAWLHYWIDEEYSGEQVTNQTFKYGVVNTEEIIPIY 149 (451) T ss_pred cCCcHHHH-----HHHHHHh-c-c---CHHHHHHHHHHHHhhcCeEEEEEeecCCcccccccccceeEEEEcccceEEEE Confidence 22211111 1122222 1 2 34567777889999999999999887641 12346667887777766 Q ss_pred cCCC--cEE----EEEEeeC-Ce--------eE-EechhheeeeccCC-------------------------CCccccc Q lcl|Aclame:pro 143 HPTT--GML----WYQTVLN-GK--------AI-ELYDYEVLHFKGLS-------------------------TDGIHGK 181 (416) Q Consensus 143 ~~~~--~~~----~~~~~~~-~~--------~~-~~~~~~vih~~~~~-------------------------~~~~~G~ 181 (416) ++.. ... +|..... .. .+ .+.++.+++.+... .+...|. T Consensus 150 dd~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~ 229 (451) T protein:vir:10 150 RNGIERELEAVIRYYIQLEDVKGQIQKQAYTYVEFWTDKILDKYKFFGVSCCGSQIEHITVQHRFNSVPFVEFSNNIKKQ 229 (451) T ss_pred cCCCCCceEEEEEEEEeeecccccccceEEEEEEEEeCCeEEEEEecccCccccccccccccCCCCeeeEEEeccCCCCC Confidence 5422 211 1111110 00 01 12233333322100 0123467 Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeecc-CCcCCHHHHHHHHHHHHHhhcCCceeecC-----CCceeEecc Q lcl|Aclame:pro 182 SPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKV-PAFLDEKPKENVRKEWKRVNKVENIAIID-----YGLEYQSIS 255 (416) Q Consensus 182 s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~vl~-----~g~~~~~~~ 255 (416) |.++.+...++....+.....+.+...+.|-.+++- +...+.+....++ ..+++.++ .+.+...+. T Consensus 230 ~d~e~v~~liDa~~~~~S~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~~~~l~ 301 (451) T protein:vir:10 230 SDLSKYKKILDLYDRVMSGFANDLEDIQQIIYILENFGGEDTSEFLKELK--------RYKTIKTETDSEGDSGGLKTMQ 301 (451) T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhccceeeeecCCcccchhhHHHHh--------hCCeEEecCcCCccCCcceEEe Confidence 778777777777776666666666666667665553 2222333222221 12233332 223333344 Q ss_pred CChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccH------------HHHHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 256 MPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNI------------EHQSIEYVRNTLQPWIVNFEQELNVKL 323 (416) Q Consensus 256 ~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~------------e~~~~~f~~~~l~P~~~~i~~~l~~~l 323 (416) .......+.+..+...+.|+..-++|.. .....|+-|.. .......+..++.-+++.|...++. T Consensus 302 ~~~~~~~~~~~~~~l~~~I~~~s~~p~~--~~~~~gn~Sg~Alk~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~-- 377 (451) T protein:vir:10 302 IEIPTEARKIILEILKKQIYESGQGLQQ--DTENFGNASGVALKFFYRKLELKSGLLETEFRTSFDKLIKAILYFLGV-- 377 (451) T ss_pred ecCCHHHHHHHHHHHHHHHHHHhCcccc--cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-- Confidence 4444556667788889999999999842 11111222211 0112222333344444444433321 Q ss_pred cCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccCccccccccccccccC Q lcl|Aclame:pro 324 FLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKA 403 (416) Q Consensus 324 ~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~ 403 (416) .+ ...+.+.++.-+..+..+.++.+.++. |+++.--+.++++.-..|. +.. .........+..+. T Consensus 378 ---~d---~~~i~i~f~~~~p~n~~e~~~~~~kl~--g~iS~et~~~~~p~v~d~~--~e~-----~~~~ee~~~~~~~~ 442 (451) T protein:vir:10 378 ---TD---YKKIQQTYTRNMMSNDLEDADIATKSV--GIIPTKIILRHHPWVDDVE--EAE-----KLYLEEKKIQASKV 442 (451) T ss_pred ---CC---ccceeEEecCCCCCCHHHHHHHHHHHh--ccCchHHHHHhCCCCCCHH--HHH-----HHHHHHHHHHHHHH Confidence 11 223445556667888999999999884 8899988888875532211 000 00000000000000 Q ss_pred CcccCCCCcc Q lcl|Aclame:pro 404 GGAMKGGDNK 413 (416) Q Consensus 404 ~~~~~gge~~ 413 (416) .+.. +.-++ T Consensus 443 ~~~~-~~~~~ 451 (451) T protein:vir:10 443 SDDY-NNFTE 451 (451) T ss_pred Hhhc-CCCCC Confidence 0111 11111 No 226 >protein:vir:94956 Length: 452 # NCBI annotation: putative phage structural protein # Family: family:all:584 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239276;genbank:gi:66392058;genbank:GeneID:5076601 Probab=89.97 E-value=0.023 Score=29.53 Aligned_cols=374 Identities=11% Similarity=0.007 Sum_probs=156.8 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCcccc-----------cccccc-HHH----HhccHHHHHHHHHHHHhhccC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTA-----------SGERVS-ESN----SLVQPDIFACVNVLSDDIAKL 64 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~~~----a~~~~~v~~~i~~ia~~ia~~ 64 (416) |-.+ .++........ -...+.+..+|.... .+..-. .+. |.-.+++...++.++..+.+- T Consensus 1 m~V~---~~hp~y~a~~~-~W~~~rd~~~G~~~~r~~g~~YLpk~~~E~~~~Y~~rl~rA~~~n~~~~t~~~~~G~vf~k 76 (452) T protein:vir:94 1 MPIE---TKHPEYLAYEN-DWIDCRVASLGQREVKKKGVRFLPKLSGQTDDMYNAYKQRALFYSITSKTLSALSGMVLDQ 76 (452) T ss_pred CCCC---CcCHHHHHHHH-HHHHHHHHhcChHHHHcCCcccCCCCCCCCHHHHHHHHhhccCCchHHHHHHHHhchhhcC Confidence 3321 11111111111 111222322221110 000000 011 222455666777666666666 Q ss_pred cceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEE-c Q lcl|Aclame:pro 65 PIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYV-H 143 (416) Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~-~ 143 (416) |..+- ....+.. ++. --...+-.+|.+.++...+.+|.|++++..+..|.--.+..+.|..+--+. + T Consensus 77 ~p~~~----------~p~~l~~-~~~-D~~G~~L~~~~~~~~~~~l~~G~~~ilVD~p~~g~rPy~~~~~~~~Ii~W~~~ 144 (452) T protein:vir:94 77 PPVIT----------HPDAMSK-YFE-DQSGIQFYEVFTRAVEETLLMGRVGVFIDRPLTGGDPYISVYTTENILNWEED 144 (452) T ss_pred Cceec----------ccHHHHH-HHh-cccCCCHHHHHHHHHHHHHhcCeEEEEEeeccCCCceEEEEechhhhcCcccc Confidence 65441 1111222 222 245678899999999999999999999988876642233333332221111 1 Q ss_pred CCCcE-----------------------EEEE-------------Eee-CCeeEE----ech------hheeeecc---C Q lcl|Aclame:pro 144 PTTGM-----------------------LWYQ-------------TVL-NGKAIE----LYD------YEVLHFKG---L 173 (416) Q Consensus 144 ~~~~~-----------------------~~~~-------------~~~-~~~~~~----~~~------~~vih~~~---~ 173 (416) ..|+. ..|+ +.. .++.+. ... -..|-|.. . T Consensus 145 ~~g~l~~v~lre~~~~~d~~d~f~~~~~~~yRvL~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~IP~v~~~~~ 224 (452) T protein:vir:94 145 EDGRLLMVVLREFYTVRDTADRYVQNIRVRYRCLELVDGLLQITVHETQDGKVWELAKTSTIQNVGVTMDYIPFFCITPS 224 (452) T ss_pred ccCCeeEEEEEEEEEEecCCCcccceeEEEEEEEEEeCCeEEEEEEEccCCceeeeccceeecCCCcccceeEEEEEcCC Confidence 11110 0011 100 000000 000 01111111 1 Q ss_pred CCCccccccHHHHHHHH-HHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCC-Ccee Q lcl|Aclame:pro 174 STDGIHGKSPIGVVREH-IGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDY-GLEY 251 (416) Q Consensus 174 ~~~~~~G~s~~~~~~~~-i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~-g~~~ 251 (416) +.+...|.||+..++.. +........+ ...+...+.|-.+++-....+ .-...++.++.+++ |.++ T Consensus 225 ~~~~~~~~pPLl~LA~ln~~hy~~~sd~-~~~l~~~~~P~l~~~g~~~~~-----------~i~iG~~~~~~lpe~~~~~ 292 (452) T protein:vir:94 225 GLSMTPAKPPMIDIVDINYSHYRTSADL-EHGRHFTGLPTPWITGAESQS-----------TMHIGSTKAWVIPEVAAKV 292 (452) T ss_pred CCCCCCCccchHHHHHHHHHHhcchhHH-HHHHHHcccceeEeecCcCCC-----------ceEecccccccCCCCCCcc Confidence 11234678887666543 4444444444 444555667766665432211 01224556778885 6544 Q ss_pred EeccCChhhHH-HHHHHHHHHHHHHHHhccchhhcccccCCCcccHHH--HHHHHHHHHHHHHHHHHHHHHHHhhc--Cc Q lcl|Aclame:pro 252 QSISMPLQEAQ-FVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEH--QSIEYVRNTLQPWIVNFEQELNVKLF--LD 326 (416) Q Consensus 252 ~~~~~~~~d~~-~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~--~~~~f~~~~l~P~~~~i~~~l~~~l~--~~ 326 (416) .-+..+.+-.. ..+.++....++ ...|. .++-....++ .+.+. ....-.+..|.-++..+++.+++.|= -. T Consensus 293 ~yie~~g~~i~~~~~~l~~le~~m-~~~Ga--~ll~~~~~~~-~s~ea~~~~~~~~~s~L~~~a~~~e~al~~~l~~~a~ 368 (452) T protein:vir:94 293 GFLEFTGQGLQSLEKALSEKQAQL-ASLSA--RLIDNSTRGS-EATETVKLRYMSETASLKSVTRAVEALLNKAYSCIMD 368 (452) T ss_pred eEEccCchhHHHHHHHHHHHHHHH-HHHHH--HhhccCCCcc-hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH Confidence 44443333221 122222222222 22222 2222211111 12222 22233357777788888888876531 11 Q ss_pred h-hcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCCCCCeEeeccCcccccccccccccc Q lcl|Aclame:pro 327 H-DQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELL---ERNPIENGDKYISSLNYVFLDFLEEYQRLK 402 (416) Q Consensus 327 ~-~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~---gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~ 402 (416) . +...+..|+.+.+=+.........+++.+++.+|.++....++.+ |....+.-++.. .++...+.... T Consensus 369 w~g~~~~~~v~~n~dF~~~~~~~~~~~al~~~~~~G~is~~t~~~~L~~~gvl~~~~e~~~i-------~~E~~~~~~~~ 441 (452) T protein:vir:94 369 MESMGGTLNIKLNSAFLDSKLTAAELKAWVEAYLSGGISKEIYIHALKVGKVLPPPGESMGV-------IPDPPAPEPSP 441 (452) T ss_pred HcCCCCceEEEeccccccccCCHHHHHHHHHHHhcCCCcHHHHHHHHHhCCCCCCccCHHHH-------HHHhhccCccc Confidence 0 112223344333323333334566777789999999999998887 443222100000 01111111112 Q ss_pred CCcccCCCCcc Q lcl|Aclame:pro 403 AGGAMKGGDNK 413 (416) Q Consensus 403 ~~~~~~gge~~ 413 (416) .+++.+||+.. T Consensus 442 ~~~~~~~~~~~ 452 (452) T protein:vir:94 442 SNTPPNPSSKA 452 (452) T ss_pred CCCCCCCccCC Confidence 22222333333 No 227 >protein:vir:97265 Length: 513 # NCBI annotation: hypothetical protein ORF013 # Family: family:all:584 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294521;genbank:gi:149408242;genbank:GeneID:5237130 Probab=87.87 E-value=0.036 Score=28.50 Aligned_cols=391 Identities=12% Similarity=0.049 Sum_probs=153.6 Q ss_pred Ccchhhhcccccccccc-----ccchhHHHhhhcCcccc--ccc-------ccc---HH----HHhccHHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHE-----DGFNNILLNMFGGRKTA--SGE-------RVS---ES----NSLVQPDIFACVNVLSD 59 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~-------~~~---~~----~a~~~~~v~~~i~~ia~ 59 (416) |-=.. + .+..+... ..-...+.++.+|.... .+. .-+ .. .|.-.+++...++.++. T Consensus 1 m~~~~-~--~~v~~~h~~y~a~~~~W~~ird~~~G~~~~r~~g~~YLPk~~~E~~~~Y~~rl~rA~~~n~~~~tl~~l~G 77 (513) T protein:vir:97 1 MADKD-P--KSPATTSGAYDQMLPRWHVIETLLGGTEAMREAGETYLPRHQEETDKGYQERLASAVLLNMVEQTLDTLSG 77 (513) T ss_pred CCCCC-C--CCCCcCCHHHHHHHHHHHHHHHHhcChHHHHhhcccCCCCCCCCCHHHHHHHHhcccCCChHHHHHHHHhh Confidence 22110 0 01111100 11123344444443211 000 000 01 22234555666666666 Q ss_pred hhccCcceEEeecCCcceeeeccchhhhhccc-cccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcE----------- Q lcl|Aclame:pro 60 DIAKLPIHTYKRTDGGIERKPEHKSAHAVYAR-PNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYP----------- 127 (416) Q Consensus 60 ~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~----------- 127 (416) .+.+-|..+... ....+...|... --..-+-.+|.+.++...+.+|.+++++..+..+.+ T Consensus 78 ~vf~k~p~~~~~--------~p~~~~~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~~~~~~~T~Ade 149 (513) T protein:vir:97 78 KPFSEPIKLNED--------VPKAIEETILPDVDLQGNNLDVFARQWFREGMAKALCHVLIDMPRPAPREDGQPRTLADD 149 (513) T ss_pred hhhhcCcccCcC--------chHHHHHHHhhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEecCCCCCccchhHHhHHHH Confidence 655555543210 111222223322 225567899999999999999999999976544311 Q ss_pred ------EEEEeeccceEE----------------------EEEcCCCcEEEEEE--eeCCeeE---------------Ee Q lcl|Aclame:pro 128 ------EALFPLRPDYTN----------------------AYVHPTTGMLWYQT--VLNGKAI---------------EL 162 (416) Q Consensus 128 ------~~l~~l~p~~v~----------------------~~~~~~~~~~~~~~--~~~~~~~---------------~~ 162 (416) -.+..+.|..|- ...+..+...+.+| ...+... .+ T Consensus 150 ~~~~~rPy~~~~~~e~IinW~~~~v~G~~~L~~v~l~E~~~~~Dgf~~~~~~q~rvL~~g~~~v~r~~~~~~~~~~e~~~ 229 (513) T protein:vir:97 150 RREGLRPYWVMIKPECLLFARSEVINGVEVLQHVRIIEHYMEQDGFAEVCKRRIRVLEPGLVQLWEPVKKSNAQKEEWAL 229 (513) T ss_pred HhhccCceEEEecHhhhcCcceeccCcceeeeeEEEEEEEeecCCCcceEEEEEEEEeCceEEEEEeecCCCccccceEE Confidence 112223332221 01111111111111 1111100 00 Q ss_pred ch-h-------heeeeccCCCCccccccHHHHHHH-HHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 163 YD-Y-------EVLHFKGLSTDGIHGKSPIGVVRE-HIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEW 233 (416) Q Consensus 163 ~~-~-------~vih~~~~~~~~~~G~s~~~~~~~-~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~ 233 (416) .. . .++.+-....+...|.+|+..++. .+.......++.. .+...+.|-.+++--.. +.. T Consensus 230 ~~~g~~~l~~IP~v~~~~~~~~~~~~~pPLl~LA~ln~~hy~~~Sd~~~-il~~~~~P~l~~~G~~~---~~~------- 298 (513) T protein:vir:97 230 ADEWATGLNYVPLVTFYADRQGFMMGKPPLLDLAHLNVAHWQSASDQRH-ILTVSRFPILACSGASG---EDS------- 298 (513) T ss_pred ecCCCCcCCceeEEEEecCCCCCCCCccchHHHHHHHHHHHhhhhhHHH-HHHhcccceeeeecCCc---CCC------- Confidence 00 0 011111111223457777765554 4444444444444 45555677777752211 100 Q ss_pred HHh-hcCCceeecCC-CceeEeccCChhhHH-HHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHHH Q lcl|Aclame:pro 234 KRV-NKVENIAIIDY-GLEYQSISMPLQEAQ-FVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQP 310 (416) Q Consensus 234 ~~~-~~~~~~~vl~~-g~~~~~~~~~~~d~~-~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~P 310 (416) +.. ..++.++.+++ |.++.-+..+.+-+. ..+.++....++ ...|. .+|......-.+........=.+..|.- T Consensus 299 ~~i~iG~~~~~~lpe~~~~~~yie~~g~~i~~~~~~l~~le~qm-~~~Ga--~ll~~~~~~~Ta~a~~~~~~~~~S~L~~ 375 (513) T protein:vir:97 299 DPVVVGPNKVLYNPDPAGRFYYVEHTGQAIAAGRTDLKDLEEQM-AGYGA--EFLKRKTGGQTATARALDSAEATSDLSA 375 (513) T ss_pred CceEeeccccccCCCCCCcceeeccCchhHHHHHHHHHHHHHHH-HHHHH--HhhccCCccccHHHHHHHHHHHHHHHHH Confidence 011 23345667775 554444444333222 223333333333 33332 3333211111112222233344556667 Q ss_pred HHHHHHHHHHHhhcCchhc----ccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhC---C-CCCCCCCe Q lcl|Aclame:pro 311 WIVNFEQELNVKLFLDHDQ----KSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLE---R-NPIENGDK 382 (416) Q Consensus 311 ~~~~i~~~l~~~l~~~~~~----~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~g---l-~p~~ggd~ 382 (416) ++..+++.+++.|--...+ ..+..|+.+.+=....-....++++.++++.|.++.-..++.+- . +|...-|+ T Consensus 376 ~a~~le~al~~~l~~~a~wlg~~~~~~~v~in~dF~~~~~~~~~~~al~~a~~~G~is~~t~~~~L~r~gvl~~d~d~~~ 455 (513) T protein:vir:97 376 MTGLFEDALAQALDITADWLRLGPNGGTVELVKDYDLEEMDAPGLQALQVAREKRDISRKTYLNGLRLRGVLPEDFDEDE 455 (513) T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCccEEEeccccCcccCCHHHHHHHHHHHhCCCCCHHHHHHHHHhccCCCccCCHHH Confidence 7888888887764211111 11222333322222222344567777889999999877776542 2 22111010 Q ss_pred ----E----eecc-----Ccccccc-ccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 383 ----Y----ISSL-----NYVFLDF-LEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 383 ----~----~~~~-----n~~~~~~-~~~~~~~~~~~~~~gge~~~~~ 416 (416) + --.. +..+++. +.+..+...-++.++||+.+-| T Consensus 456 ~~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (513) T protein:vir:97 456 DWEELMEEISEAMGRAGLDLDPAQKNPPEGGEGEGEGEGEGGEGGEGG 503 (513) T ss_pred HHHHHHHhhhhccCCCCccccccCCCCCCCCCCCCCCCCCCCCCCCcc Confidence 0 0000 0001110 0000000000122233333333 No 228 >protein:vir:104500 Length: 537 # NCBI annotation: gp20 # Family: family:all:1036 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214665;genbank:gi:61806306;genbank:GeneID:3294555 Probab=87.31 E-value=0.04 Score=28.27 Aligned_cols=401 Identities=9% Similarity=0.027 Sum_probs=169.7 Q ss_pred cchhhhc-----cc----cccccc---cccchhHHHhhhcCcccc-cccc------c-cHHHHhccHHHHHHHHHHHHhh Q lcl|Aclame:pro 2 LLERMFE-----KR----SGSSDH---EDGFNNILLNMFGGRKTA-SGER------V-SESNSLVQPDIFACVNVLSDDI 61 (416) Q Consensus 2 ~~~~~f~-----~~----~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~------~-~~~~a~~~~~v~~~i~~ia~~i 61 (416) .-..+|+ .+ ..+..+ ..+......+.+.+.... .+.. + ..+..+.+|.|..||+-|.+.+ T Consensus 1 ~~~~lfg~~i~~~~~~~~~~s~~~~~~~dg~~~~~~~~~~g~~~~~e~~~~~~~eLI~~YR~ma~~pEvd~Av~eIVnea 80 (537) T protein:vir:10 1 MAQQLFGFSLQRAKKVPKGPSFVQKDSLDGSQPIVGGGYFGYSVDFDGTIRNDHELITRYREMVLNPECDSAVDDVVNET 80 (537) T ss_pred CccccccceeecccccccCCcccCCCcccccceeecccccccccccccccchHHHHHHHHHHHhhccchhhHHHHhhcce Confidence 1122222 11 111111 111111222222221111 1111 1 2356667999999999999887 Q ss_pred ccCcce-----EEeecCC---cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC---CcEEEE Q lcl|Aclame:pro 62 AKLPIH-----TYKRTDG---GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH---GYPEAL 130 (416) Q Consensus 62 a~~~~~-----~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~---g~~~~l 130 (416) .-..-. +--.+-+ ..+..+.....+.| . .++...--+.+++.|...|..|..++.+.. .-+.+| T Consensus 81 iv~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il-~----ll~F~~~~~e~fR~WYVDgRi~fhKiid~k~pk~GI~EL 155 (537) T protein:vir:10 81 ICGNFDDVPISIDLHNLKQSEKIKKLIRSEFDEIL-R----LLDFDNRAYEIFRRWYVDGRLFFHKVIDPKKPRQGLVEL 155 (537) T ss_pred eEecCCCceEEEEecccccchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhheeeeEEEEEEEEeCCCccccceee Confidence 643322 1111100 00000001111111 1 122333334556677888999988865422 237899 Q ss_pred EeeccceEEEEEcC-----CCcE-------------EEEEEee------CCeeEEechhheeeec--cCCCCccccccHH Q lcl|Aclame:pro 131 FPLRPDYTNAYVHP-----TTGM-------------LWYQTVL------NGKAIELYDYEVLHFK--GLSTDGIHGKSPI 184 (416) Q Consensus 131 ~~l~p~~v~~~~~~-----~~~~-------------~~~~~~~------~~~~~~~~~~~vih~~--~~~~~~~~G~s~~ 184 (416) ..|+|..++..... .+.. -|+.|.. .++.+.++.+-|.... ....++-+.+|-+ T Consensus 156 r~lDPr~i~~vR~i~~~~~~~~~~~~~~~~v~~~~~eyf~ynp~g~~~~~~~~vkI~~dAI~y~hSGl~d~n~~~i~syL 235 (537) T protein:vir:10 156 RYVDPRKIRKVTEYEAKRPEALRTQDLNQQLTQQSASYFLYNPKGLKNSTNQGMKIAPDSIAYCHSGIQDLNKNMVLSHL 235 (537) T ss_pred eeeCCccceeeEeecccCCccceEEecceeeeecccceeeeccccccccCCCceeccHhheeeecccceeCCCCeeeeee Confidence 99999988654431 1111 1222222 2344566664443332 1233456778889 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CCc-------------- Q lcl|Aclame:pro 185 GVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VEN-------------- 241 (416) Q Consensus 185 ~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~~-------------- 241 (416) ..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .|. T Consensus 236 hkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddrk~msMlEDy 315 (537) T protein:vir:10 236 HKAIKAVNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKNKAEQYLREVMGRYRNKLVYDANTGEIKDDKKFMSMLEDF 315 (537) T ss_pred hhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccchhhhhhhhh Confidence 9999888888888887765444444334454443 333 33333444444443321 121 Q ss_pred eeecC---CCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHH---HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 242 IAIID---YGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEH---QSIEYVRNTLQPWIVNF 315 (416) Q Consensus 242 ~~vl~---~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~---~~~~f~~~~l~P~~~~i 315 (416) ++.-- .|.+++.|.. ...+.-++-.++..+.+.++++||.+-|.....-+.....+ .-..|..+ |.-+...+ T Consensus 316 WLPRReGgrgTEItTLpG-gqnlgem~DV~YF~kKLy~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~KF-I~RLR~rF 393 (537) T protein:vir:10 316 WLPRREGGRGTEISTLPG-GQNLGELEDVKYFQKKLYKALNVPSSRLETETTFNIGRAAEITRDEVKFQKF-IARLRKRF 393 (537) T ss_pred cccccCCCcccceeeccc-cCCcChHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHHHH-HHHHHHHH Confidence 11111 3455555543 22233345556788999999999999996433222221111 11123222 45555555 Q ss_pred HHHHHHhh----c-----Cchhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHHH--hCCC------------cC Q lcl|Aclame:pro 316 EQELNVKL----F-----LDHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTLH--ETGV------------LN 364 (416) Q Consensus 316 ~~~l~~~l----~-----~~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~~--~~g~------------~t 364 (416) +..|..-| + ++.++.. ...|+|++..--... +..+++.+..+- -+-. || T Consensus 394 s~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~s~dyi~k~ILr~t 473 (537) T protein:vir:10 394 SELFVDLLKTQLILKGICSIEEWEEMKEHIQFDFIADNYFTELKEIEIRNERMNEVAQMDPYVGKYFSANYIRTKVLKQT 473 (537) T ss_pred HHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHHhccC Confidence 55554433 2 2233221 223333332210101 122333332221 1111 23 Q ss_pred HHHHHHH-------h--CCCCCCC----C------CeEeeccCccccccccccccccCCcccCCCCc Q lcl|Aclame:pro 365 KDEIREL-------L--ERNPIEN----G------DKYISSLNYVFLDFLEEYQRLKAGGAMKGGDN 412 (416) Q Consensus 365 ~NE~R~~-------~--gl~p~~g----g------d~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~ 412 (416) =.|+-++ . |+=+.|. | ...+.|.+..|..+++.. -++...+|||- T Consensus 474 DeeI~~~~k~I~~E~k~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 537 (537) T protein:vir:10 474 ESEIKEIDKEIKQEIADGVIMDPQAMQAMEMGIGDEEPVPEGGEEPQTDPNSA---VSPADQKRGEL 537 (537) T ss_pred HHHHHHHHHHHHHHhhCCCCCCcccccccccCCCCcccCCCCCCCcccCCccC---CCCCCccCCCC Confidence 3333221 1 1111121 1 112222222222111111 11112233444 No 229 >protein:vir:100598 Length: 516 # NCBI annotation: gp20 head portal vertex protein # Family: family:all:1036 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656382;genbank:gi:109290133;genbank:GeneID:4156576 Probab=85.37 E-value=0.053 Score=27.56 Aligned_cols=393 Identities=9% Similarity=0.031 Sum_probs=168.0 Q ss_pred Ccchhhhccc---------------cccccccccch----------h-HHHhhhcCccccccc------cc-cHHHHhcc Q lcl|Aclame:pro 1 MLLERMFEKR---------------SGSSDHEDGFN----------N-ILLNMFGGRKTASGE------RV-SESNSLVQ 47 (416) Q Consensus 1 m~~~~~f~~~---------------~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~------~~-~~~~a~~~ 47 (416) |-+.++|+.. ..+-.+...-+ . ...++++......+. -+ ..+..+.+ T Consensus 1 ~~~~~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~DGa~~i~~~~~~~~~~g~~~~~~d~~~~~~~~~~LI~~YR~ma~~ 80 (516) T protein:vir:10 1 MKFLDLFKFWDRVDQNEYDERLKQGHESIATPKKDDGATEIEAREGESSYNALMQQFFGIDNNISGTKDLINTYRQLTNN 80 (516) T ss_pred CCchHhcccccchhhHHHHhhhcCCCCcccCCCCccCceeeecCcccccccceeeeeecccCccccHHHHHHHHHHhhhc Confidence 7766777641 11111100000 0 000111000000000 01 23566679 Q ss_pred HHHHHHHHHHHHhhccCcc-----eEEeecCCcceeeec----cchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEE Q lcl|Aclame:pro 48 PDIFACVNVLSDDIAKLPI-----HTYKRTDGGIERKPE----HKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSY 118 (416) Q Consensus 48 ~~v~~~i~~ia~~ia~~~~-----~~~~~~~~~~~~~~~----~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~ 118 (416) |.|..||+.|.+.+.-..- .+--.+- .....+. ....+.+ . .++...--..++..|...|..|.. T Consensus 81 pEvd~Av~eIvneaiv~d~~~~pV~l~l~~~-e~s~sik~kI~eeF~~Il-~----ll~F~~~~~~~fR~WYVDgRi~fh 154 (516) T protein:vir:10 81 PEVERAVANIVNEAVVYEKGHKVVSLDLDDT-EFSSSIKDKILEEFDEIC-R----LLDASRKLDTLFRRWYIDSRIFFH 154 (516) T ss_pred cchhHHHHHhhcceeEecCCCceEEEEeccc-ccchHHHHHHHHHHHHHH-H----HhccchhhhHHHHhhhhcceEEEE Confidence 9999999999988764322 1110000 0000000 0011111 1 122223334455677788999888 Q ss_pred Eeec-CCCcEEEEEeeccceEEEEEcC-----C------CcEEEEEEeeC-------------CeeEEechhheeeecc- Q lcl|Aclame:pro 119 IQFG-SHGYPEALFPLRPDYTNAYVHP-----T------TGMLWYQTVLN-------------GKAIELYDYEVLHFKG- 172 (416) Q Consensus 119 i~r~-~~g~~~~l~~l~p~~v~~~~~~-----~------~~~~~~~~~~~-------------~~~~~~~~~~vih~~~- 172 (416) ++.+ ...-+.+|..|+|..++..... + +...+|.|..+ +..+.++.+-|..... T Consensus 155 Kiid~~k~GI~elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~daI~y~hSG 234 (516) T protein:vir:10 155 KIMPNPKEGIVELRRLDPRHVEYYREIVTSDVGGTSVVKGYREFFVYTTGNEGYAYNGRLFEPNTRIKIPRSAIVYAHSG 234 (516) T ss_pred EEecCcccceeeeeeeCCcceeeEEeeecccCcchhhhhceeeeeeeecCccceeccccccCCCCceecchhheeeeecC Confidence 5443 3344889999999988875432 1 11122333211 1224444444433321 Q ss_pred -CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CCce Q lcl|Aclame:pro 173 -LSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VENI 242 (416) Q Consensus 173 -~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~~~ 242 (416) ...++-.-+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .|.+ T Consensus 235 l~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~KNklvYDa~TGev 314 (516) T protein:vir:10 235 LQDCSDRGIVGYLHNAVKPANQLKLLEDALVIYRITRAPERRVFYIDVGNMPNRKATEYVNGIMQSLKNRVVYDSNTGTV 314 (516) T ss_pred cccCCCCceeceehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCee Confidence 1122222367888888888888777777664444444334444443 233 33344444544443322 1211 Q ss_pred --------------eec---CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc---ccHHHHHH- Q lcl|Aclame:pro 243 --------------AII---DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF---SNIEHQSI- 301 (416) Q Consensus 243 --------------~vl---~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~---s~~e~~~~- 301 (416) +.- ..|.+++.|.. .+.+.-++-.++..+.+.++++||.+-+....+++. .+.|=.+. T Consensus 315 ~ddrk~msMlEDyWLpRReGgrgTEItTLpG-gqnlgem~DV~YF~kkLy~aLnVP~SRl~~e~~~~~~~Gr~~EItRDE 393 (516) T protein:vir:10 315 KNQKRNLSMTEDYWLMRRDGKSVTEVTSLPG-AQTMGEMDDVRWFNKKLYEALRIPLSRMPRDDGGMVIGGQDMAITRDE 393 (516) T ss_pred ccchhhhhhHhhhcccccCCCcccceeeccc-cCCcChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHH Confidence 111 13455555543 222333445567889999999999999975443221 11222111 Q ss_pred HHHHHHHHHHHH----HHHHHHHHhhc-----Cchhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHHH--hCCC Q lcl|Aclame:pro 302 EYVRNTLQPWIV----NFEQELNVKLF-----LDHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTLH--ETGV 362 (416) Q Consensus 302 ~f~~~~l~P~~~----~i~~~l~~~l~-----~~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~~--~~g~ 362 (416) .-+..-|.-+.. .+.+.|.+.|+ +..++.. ...|+|++..--... +..+++.+..+- -+.+ T Consensus 394 iKF~KFI~rLR~rFs~lF~~~L~~qLilKgIit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky 473 (516) T protein:vir:10 394 LDFRKFIVQLQHNFEEIFLDPLKTNLIYKKIILESEWEEQINNIKVNFHQDSYYTELKDIETLRQRVDALSQIEPYVGKY 473 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccc Confidence 112222444444 44455555333 3333321 123333332211111 123333333331 3456 Q ss_pred cCHHHHHHH-hCCCCCCCCCeEeeccCccccccccccccccCCcccCC--CCccCCC Q lcl|Aclame:pro 363 LNKDEIREL-LERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKG--GDNKNEG 416 (416) Q Consensus 363 ~t~NE~R~~-~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~g--ge~~~~~ 416 (416) ++.+=+|+. |.+.-.+ ..+.+.+-+.+..+| -+.+++. T Consensus 474 ~s~~yi~k~ILr~tDee----------------i~~~~k~I~~E~~~~~~~~p~~e~ 514 (516) T protein:vir:10 474 VSHDYVMKNILQMTDEQ----------------IAQEEKQIEKEANVKRFQNPENED 514 (516) T ss_pred cchHHHHHHHhcCCHhH----------------HHHHHHHHHHhhhCCCCCCCCccc Confidence 666666653 4433210 000000000011111 1111112 No 230 >protein:vir:98265 Length: 524 # NCBI annotation: gp20 portal vertex of the head # Family: family:all:1036 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239198;genbank:gi:66391673;genbank:GeneID:3416367 Probab=83.72 E-value=0.066 Score=27.05 Aligned_cols=392 Identities=10% Similarity=0.079 Sum_probs=164.3 Q ss_pred Cc--chhh-----------hccccccccccccchhH-------HHhhhcCcccc--c--ccc-------c-cHHHHhccH Q lcl|Aclame:pro 1 ML--LERM-----------FEKRSGSSDHEDGFNNI-------LLNMFGGRKTA--S--GER-------V-SESNSLVQP 48 (416) Q Consensus 1 m~--~~~~-----------f~~~~~~~~~~~~~~~~-------~~~~~~~~~~~--~--~~~-------~-~~~~a~~~~ 48 (416) |+ |+.| .+++..+-.+...-+.. ...+.+|.... . ... + ..+..+.+| T Consensus 9 ~l~~~~~~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~y~~~e~~~~~~~eLI~~YR~ma~~p 88 (524) T protein:vir:98 9 VLSFFKNFAREDEIELEQQLKNDTGSVAPPKNNDGAYEIETDLNNQKYAGVFQQFYSGQDPAIQNKEQLINTYRGIMSYP 88 (524) T ss_pred HHHHhhhhhhhhhhhHhhhhcCCcccccCCCCCCCceeecCCCCcceecceeeeeccccccccchHHHHHHHHHHHhhcc Confidence 11 1111 11111111111110000 00111111111 0 000 1 134566899 Q ss_pred HHHHHHHHHHHhhccCcc-----eEEeecCC---cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEe Q lcl|Aclame:pro 49 DIFACVNVLSDDIAKLPI-----HTYKRTDG---GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQ 120 (416) Q Consensus 49 ~v~~~i~~ia~~ia~~~~-----~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~ 120 (416) .|..||+.|.+.+.-..- .+--.+-+ +.+..+.....+.+ . .++...--..++..|...|..|..++ T Consensus 89 Evd~Av~eIVneaIv~~~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il-~----ll~F~~~~~~~fR~WYVDgRi~fhki 163 (524) T protein:vir:98 89 EVENAVSEIIDDAIVNEQGKDIITMDLAKTNFSKAIQDKIVEEFDNVL-N----IYDFDNMGARLFRDWYVDSRIYFHKI 163 (524) T ss_pred chhhHHHhhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhhhhcceeEEEEE Confidence 999999999988743211 11110000 00000000111111 1 12223333445667788999999998 Q ss_pred ecCCCc--EEEEEeeccceEEEEEc-----CCCc-------EEEEEEe-------------eCCeeEEechhheeeeccC Q lcl|Aclame:pro 121 FGSHGY--PEALFPLRPDYTNAYVH-----PTTG-------MLWYQTV-------------LNGKAIELYDYEVLHFKGL 173 (416) Q Consensus 121 r~~~g~--~~~l~~l~p~~v~~~~~-----~~~~-------~~~~~~~-------------~~~~~~~~~~~~vih~~~~ 173 (416) .+.+.. +.+|..|+|..++.... .+++ .-+|.|. ..++.+.++.+.|.|...- T Consensus 164 id~~~~kGI~ELr~lDPr~i~~vr~~~~~~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~ikI~~dAIvy~hSG 243 (524) T protein:vir:98 164 MHKDESKGIRELRQLDPRCMELIRESITETLDGGVKVFRGYREFFVYSAPKAGYTYNGQIYQANQKIKIPRSAIVYAHSG 243 (524) T ss_pred EcCCCCcceeeeeeeCCccceeeeeccccccccchhhccceeeeeeeccCCCccccccceecCCCceeechhheeeeccC Confidence 654433 88999999999876531 1111 1122232 1234577888888886521 Q ss_pred --CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CCce Q lcl|Aclame:pro 174 --STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VENI 242 (416) Q Consensus 174 --~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~~~ 242 (416) +.++ .-+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .|.+ T Consensus 244 L~d~~~-~iisyLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev 322 (524) T protein:vir:98 244 LEDCSN-NIIGYLHRAVKPANQLRLLEDAMVIYRITRAPERRVFYIDVGQMGGNKATQYVNNIAQGLKNRVVYDARTGTV 322 (524) T ss_pred cccCCC-CeeeehhHhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeeccCcee Confidence 2111 1257888888888887777777664444444334444443 333 33444445554444331 1211 Q ss_pred --------------eec---CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCC-C--ccc-HHHHHH Q lcl|Aclame:pro 243 --------------AII---DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKA-T--FSN-IEHQSI 301 (416) Q Consensus 243 --------------~vl---~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~-~--~s~-~e~~~~ 301 (416) +.- ..|.+++.|.. .+.+.-++-.++..+.+.++++||.+-+...+++ + .++ ..-.-. T Consensus 323 rddrk~msMlEDyWLpRReGgrgTEItTLpg-gqnlgem~DV~YF~kkLy~aLnVP~sRl~~~~~~f~~Gr~~EItRDEi 401 (524) T protein:vir:98 323 KNQQNNLSMTEDYWLMRRDGKAITEVSTLPG-GQNFSDMDDIKWFNRKLYEALRVPLSRMPRDDGGMQIGGGGEITRDEL 401 (524) T ss_pred eccccccchhhhhcccccCCCCccceeeccc-cCCcChHHHHHHHHHHHHHHhCCCceeccCCCCccccccccchhHHHH Confidence 111 23455555543 2223334555678899999999999999643321 1 111 111111 Q ss_pred HHHHHHHHHHHHHHHHHHHH----hhcC-----chhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHHH--hCCC Q lcl|Aclame:pro 302 EYVRNTLQPWIVNFEQELNV----KLFL-----DHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTLH--ETGV 362 (416) Q Consensus 302 ~f~~~~l~P~~~~i~~~l~~----~l~~-----~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~~--~~g~ 362 (416) .|..+ |.-+...++..|.. .|+. +.++.. ...|+|++..--... +..+++.+..+- -+-+ T Consensus 402 KF~KF-I~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky 480 (524) T protein:vir:98 402 KFSKF-IRTLQIQFSPVLSDPLKTNLIAKKIITEDEWEENVSKISFVFQQDSYYAEVKDIEILERRLNLMSQVEGVVGKY 480 (524) T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEEeecchHHHHHHHHHHHHHHHHHHHhccccccc Confidence 22222 44455555544443 3322 222111 122333332211111 122223322221 1224 Q ss_pred cCHHHHHHH-hCCCCCCCCCeEeeccCccccccccccccccCCcccCC----CCccCCC Q lcl|Aclame:pro 363 LNKDEIREL-LERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKG----GDNKNEG 416 (416) Q Consensus 363 ~t~NE~R~~-~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~g----ge~~~~~ 416 (416) ++.+=+|+. |.+.-. .+ .+.+.+-+.+..+| .+.+.+- T Consensus 481 ~s~dyi~k~ILr~tDe-------------ei---~~~~k~I~~E~k~~~~~~p~~e~~~ 523 (524) T protein:vir:98 481 VSHKYIMKEILRMSDE-------------DI---DEQAKLIEEESKEERFKNPEAEEEN 523 (524) T ss_pred cchHHHHHHHhccCHH-------------HH---HHHHHHHHHHHhCCCCcCCcccccc Confidence 455555442 222110 00 00000000111111 1111111 No 231 >protein:vir:106999 Length: 564 # NCBI annotation: portal vertex protein gp20 # Family: family:all:1036 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195138;genbank:gi:58532915;interpro:IPR010823;uniprot:Q5GQN4;genbank:GeneID:3260496 Probab=80.35 E-value=0.096 Score=26.17 Aligned_cols=404 Identities=11% Similarity=0.092 Sum_probs=166.6 Q ss_pred chhhhc----cc----cccccc---cccchhHHHhhhcCccccccc--c------c-cHHHHhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 3 LERMFE----KR----SGSSDH---EDGFNNILLNMFGGRKTASGE--R------V-SESNSLVQPDIFACVNVLSDDIA 62 (416) Q Consensus 3 ~~~~f~----~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~------~-~~~~a~~~~~v~~~i~~ia~~ia 62 (416) .+.+|+ ++ ..+-.+ ..+......++++......+. . + ..+..+.+|.|..||+.|.+.+. T Consensus 1 m~~lfgf~i~~~~~~~~~S~vpp~~~~~~~~i~~g~~g~~v~~~g~~~~~n~~eLI~~YR~ma~~pEVd~Av~eIVneaI 80 (564) T protein:vir:10 1 MSQLFGFLINEKEGQKGQSPVPPNDEASVSTVAGGYFGTYVDTSGGQNSRNEYELIRRYRDMSLHPEVDSAIDEIVNEFV 80 (564) T ss_pred CcchhcceeeeeccCCCCCcccCCcCCChhhhhccccceeeecccccchhhHHHHHHHHHHHhhccchhhHHHHhhccee Confidence 223343 11 111111 111111111111111111110 0 1 12455679999999999998854 Q ss_pred cCcc-----eEEeecCCcceee----eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec----CCCcEEE Q lcl|Aclame:pro 63 KLPI-----HTYKRTDGGIERK----PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG----SHGYPEA 129 (416) Q Consensus 63 ~~~~-----~~~~~~~~~~~~~----~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~----~~g~~~~ 129 (416) -..- .+--.+- ..... +.....+.| . .++...--..+++.|...|..|..++-+ +.| +.+ T Consensus 81 v~d~~~~pV~vdL~~~-~~s~siK~kI~eEF~~Il-~----ll~F~~~~~e~fR~WYVDgRi~fHkiid~~~pk~G-I~e 153 (564) T protein:vir:10 81 VNDGDDKPVEVDLQNL-EIGSGVKKKIRDEFNRIL-R----MMNFNVNAHEIIRNWYVDGRSHYHKVIDLDNPKKG-ILE 153 (564) T ss_pred EecCCCceEEEEeccc-CcchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhhhhcceEEEEEEeeCCChhhh-hhh Confidence 3221 1111000 00000 000111111 1 1222333344566777889999887543 234 889 Q ss_pred EEeeccceEEEEEcC------CCc---------------EEEEEEeeC-----------------CeeEEechhheeeec Q lcl|Aclame:pro 130 LFPLRPDYTNAYVHP------TTG---------------MLWYQTVLN-----------------GKAIELYDYEVLHFK 171 (416) Q Consensus 130 l~~l~p~~v~~~~~~------~~~---------------~~~~~~~~~-----------------~~~~~~~~~~vih~~ 171 (416) |..|+|..++..+.. .+. .-||.|... +..+.++.+.|.|.. T Consensus 154 Lr~lDPr~i~~vr~i~~~~~~~~~~v~k~~~~~~~y~~~~Eyy~Ynp~~~~g~~~~~~~~~~~~~~~~ikI~~daI~y~h 233 (564) T protein:vir:10 154 LRYIDSLKIRKVRQKLKDVDPNRKEIEKGTALQYDYGDFIEYYIYNPKGFAGNIPMVTGSMDWSNQEGIKIASDAIAQST 233 (564) T ss_pred hhhhcccceeeeeeeccccccccceeeeeeeeeccccccccceeeccccccCcccccccccccccccceeechhhcceec Confidence 999999977765421 111 123333311 123566666666655 Q ss_pred c--CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CC Q lcl|Aclame:pro 172 G--LSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VE 240 (416) Q Consensus 172 ~--~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~ 240 (416) . ...++-.-+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .| T Consensus 234 SGL~d~~~~~i~gyLhkAIKp~NQLkmlEDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TG 313 (564) T protein:vir:10 234 SGLMDLNKKMTLSFLHKAIKSLNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKVKAEQYLRDVMSRYRNKLVYDGQTG 313 (564) T ss_pred ccceeCCCCceeccchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCc Confidence 2 2334445577888888888888777777664444444334444443 333 33333444444443321 12 Q ss_pred ce--------------eec---CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCC-C--ccc-HHHH Q lcl|Aclame:pro 241 NI--------------AII---DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKA-T--FSN-IEHQ 299 (416) Q Consensus 241 ~~--------------~vl---~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~-~--~s~-~e~~ 299 (416) .+ +.- ..|.+++.|... ..+.-++-.++..+.+.++++||.+-|.....+ + .++ ..-. T Consensus 314 evrddrk~msMlEDyWLPRReGgrgTEItTLpGg-qnLgem~DV~YF~kKLY~aLnVP~SRl~~e~~~f~~Gr~~EItRD 392 (564) T protein:vir:10 314 EIRDDKKHMSMLEDFWLPRREGGRGTEITTLPGG-QNLGELKDVEYFKKKLYNSLNLPPSRLTDDNKAFNLGKSTEILRD 392 (564) T ss_pred eecccchhhhhHhhhcccccCCCcccceeecccc-CCcchHHHHHHHHHHHHHHhCCCcccccCCCceeecccccchhHH Confidence 11 111 234555555432 233334455678899999999999999754221 1 111 1111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh----c-----Cchhccc-ccchhhhhhh--hhh-----ccHHHHHHHHHHH--HhC Q lcl|Aclame:pro 300 SIEYVRNTLQPWIVNFEQELNVKL----F-----LDHDQKS-GHYVKFNIDS--ELR-----GDSKTQAEYLKTL--HET 360 (416) Q Consensus 300 ~~~f~~~~l~P~~~~i~~~l~~~l----~-----~~~~~~~-~~~~~f~~~~--l~~-----~d~~~~~~~~~~~--~~~ 360 (416) -..|..+ |.-+...++..|..-| + ++.++.. ...|+|++.. ... .-+..+++.+..+ +-+ T Consensus 393 EiKF~KF-I~RLR~rFs~lF~~~Lk~qLiLKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvG 471 (564) T protein:vir:10 393 ELKFTKF-IGRLRKRFAQLFHDILKTQLILKGIITPEDWDDMEEHIQYDFLFDNHFNELKEQEMQLQRVNLATQMDPFVG 471 (564) T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhc Confidence 1123222 5555555555554433 2 2223221 1233333322 100 0012233332222 001 Q ss_pred CC------------cCHHHHHHH---------hCC--CCC--CCCCeEeecc-Ccccccccc------cccc------cc Q lcl|Aclame:pro 361 GV------------LNKDEIREL---------LER--NPI--ENGDKYISSL-NYVFLDFLE------EYQR------LK 402 (416) Q Consensus 361 g~------------~t~NE~R~~---------~gl--~p~--~ggd~~~~~~-n~~~~~~~~------~~~~------~~ 402 (416) -. ||=.|+-++ .|+ +|. ..||..-+.. .+.|.+..- .++. ++ T Consensus 472 ky~S~dyi~k~ILr~tDeei~~~~kqI~~E~k~~~~~~P~e~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~a~~ 551 (564) T protein:vir:10 472 KYFSTEYIRRKILMQTENEFKEIDKQMKSDIESGLAIDPIQVNMLDDMEKQNQAFAPELQAAQDDLAAEREIKKLNSAPK 551 (564) T ss_pred cccchHHHHHHHhccCHHHHHHHHHHHHHHhhcCCCCCchhhhcCCCccCCCCcCCcchhhhccccccccChhhhccCCC Confidence 11 233333321 122 221 1243222221 112221110 1111 11 Q ss_pred CCcccCCCCccCC Q lcl|Aclame:pro 403 AGGAMKGGDNKNE 415 (416) Q Consensus 403 ~~~~~~gge~~~~ 415 (416) .+...++++..+. T Consensus 552 ~~~~~~~~~~~~~ 564 (564) T protein:vir:10 552 PPPSQQSKSQSNK 564 (564) T ss_pred CCCCCCCcCcCCC Confidence 1111222222222 No 232 >protein:vir:106282 Length: 521 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944108;genbank:gi:38640152;genbank:GeneID:2658030 Probab=80.14 E-value=0.098 Score=26.12 Aligned_cols=393 Identities=9% Similarity=0.064 Sum_probs=168.8 Q ss_pred Ccchhhhccc---cc------------cccccccch-h--------------HHHhhhcCcccc--cccc-c-cHHHHhc Q lcl|Aclame:pro 1 MLLERMFEKR---SG------------SSDHEDGFN-N--------------ILLNMFGGRKTA--SGER-V-SESNSLV 46 (416) Q Consensus 1 m~~~~~f~~~---~~------------~~~~~~~~~-~--------------~~~~~~~~~~~~--~~~~-~-~~~~a~~ 46 (416) ..+.++|+.. .+ +-.+....+ . .+.+.+.+..+. +... + ..+..+. T Consensus 3 ~~~l~lf~f~~k~~e~~~~~~~~~~~~s~~~p~~~dGa~~I~~~~~~~~~~~~~~~~~~~~~~~~~n~~eLI~~YR~ma~ 82 (521) T protein:vir:10 3 PIFLKLLQPWMKDDEKRVQSDLSDRIDSFAVPDTADGAIEVDKQIDTTAPKTAIVQSVLGYAPKIQNTKDLINQYRSLSK 82 (521) T ss_pred cchhHHhhhhhhhhhhHHhhhhccCccccccccCCCCceeeccCCCccccccchhhhhhccccccchHHHHHHHHHHHhh Confidence 1111223211 11 111100000 0 000000000000 0000 1 2355678 Q ss_pred cHHHHHHHHHHHHhhccCc-----ceEEeecCCc---ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEE Q lcl|Aclame:pro 47 QPDIFACVNVLSDDIAKLP-----IHTYKRTDGG---IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSY 118 (416) Q Consensus 47 ~~~v~~~i~~ia~~ia~~~-----~~~~~~~~~~---~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~ 118 (416) +|.|..||+.|.+.+.-.. ..+--.+-+. .+..+.....+.+ . .++...--..++..|...|..|.. T Consensus 83 ~pEvd~Av~eIvneaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eeF~~Il-~----ll~F~~~~~~~fR~WYVDgRi~fH 157 (521) T protein:vir:10 83 YHEVDNAIDEIINDAIVQEDNRDTVYLDLDKTDWNESVKEMVREEFRTIL-K----LLKFEREGKRHFRRWYVDSRIYFH 157 (521) T ss_pred ccchhhHHHhhhcceEEecCCCceEEEEecCcccchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhheeeeeEEEE Confidence 9999999999998876433 1111111000 0000001111111 1 122233334456677889999998 Q ss_pred Eeec-C--CCcEEEEEeeccceEEEEEcC----CCc-------EEEEEEee-----------CCeeEEechhheeeec-- Q lcl|Aclame:pro 119 IQFG-S--HGYPEALFPLRPDYTNAYVHP----TTG-------MLWYQTVL-----------NGKAIELYDYEVLHFK-- 171 (416) Q Consensus 119 i~r~-~--~g~~~~l~~l~p~~v~~~~~~----~~~-------~~~~~~~~-----------~~~~~~~~~~~vih~~-- 171 (416) ++-+ + ..-+.+|..|+|..++..... .++ .-+|.|.. .+..++++.+.|.|.. T Consensus 158 kiid~~~pk~GI~Elr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~~g~~~~~vkI~~daI~y~hSG 237 (521) T protein:vir:10 158 KMIDPARPKDGIKELRLLDPRNVEYYRVNLKSNENGNDVYKGVKEFFTYGATEDNRYNISGNSNNLVQIPIDAIVYSHSG 237 (521) T ss_pred EEeeCCCccccceeeeeeCCcceeeeeeecCCCCCcchhhccceeeeeeccCCCceecCCCCCCcceeechhheeeeccc Confidence 7654 2 224789999999998654321 111 12233321 1123567776665554 Q ss_pred cCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CCce Q lcl|Aclame:pro 172 GLSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VENI 242 (416) Q Consensus 172 ~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~~~ 242 (416) ....++-+.+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .|.+ T Consensus 238 L~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlpk~KAeqYl~~iM~k~kNklVYDa~TGev 317 (521) T protein:vir:10 238 KVDIDGKTIVGYLHNVIKPANQLKMLEDAMVIYRITRAPERRVFYIDVGTMPNKKATQHLNNVMQGLKNRVVYDSSTGKV 317 (521) T ss_pred ceeCCCCceeccchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCcee Confidence 23445677889999999999888888887765444444434444443 333 33333444444443321 1211 Q ss_pred --------------eec---CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCC-C--cc-cHHHHHH Q lcl|Aclame:pro 243 --------------AII---DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKA-T--FS-NIEHQSI 301 (416) Q Consensus 243 --------------~vl---~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~-~--~s-~~e~~~~ 301 (416) +.- ..|.+++.|.. .+.+.-++-.++..+.+.++++||.+-|..-.++ + .+ ...-.-. T Consensus 318 ~ddrk~msMlEDyWLpRReGgrgTEI~TLpg-gqnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~f~~Gr~~EItRDEi 396 (521) T protein:vir:10 318 KNSSNNLAMTEDYWLMRRDGKATTEVSTLPG-AQSMGEMDDVRWFNRKLYESMKIPLSRLPQEGAGVTFGAGNDITRDEL 396 (521) T ss_pred ccchhhhhhHhhhcccccCCCCccceeeccc-cCCcChHHHHHHHHHHHHHHhCCCccccCCCCCceecccccchhHHHH Confidence 111 13455555543 2223334555678899999999999998643221 1 11 1111111 Q ss_pred HHHHHHHHHHHHHHHHHHHHhh----c-----Cchhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHH----HhC Q lcl|Aclame:pro 302 EYVRNTLQPWIVNFEQELNVKL----F-----LDHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTL----HET 360 (416) Q Consensus 302 ~f~~~~l~P~~~~i~~~l~~~l----~-----~~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~----~~~ 360 (416) .|..+ |.-+...++..|..-| + ++.++.. ...|+|++..--... +..+++.+..+ +-+ T Consensus 397 kF~KF-I~rLR~rFs~~f~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~eil~~R~~~l~~~dp~~yvG 475 (521) T protein:vir:10 397 QFTKY-IRGLQQQFEPIFLNPLRTNLMLKGKMSVSEWEEQAENIKVVFSKDSYYEEIKDVEILERRVNLVQTLASAEVTG 475 (521) T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHhhcCccccc Confidence 23222 5555555555554433 2 2222221 123333332211111 12333333333 122 Q ss_pred CCcCHHHHHHH-hCCCCCCCCCeEeeccCccccccccccccccCCcccCC---CCccCCC Q lcl|Aclame:pro 361 GVLNKDEIREL-LERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKG---GDNKNEG 416 (416) Q Consensus 361 g~~t~NE~R~~-~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~g---ge~~~~~ 416 (416) -+++.+=+|+. |.+.-. +....+.+-+.+..+| ..++++. T Consensus 476 ky~s~dyi~k~ILr~tDe----------------eik~~~k~I~~E~~~~~~~~p~~e~~ 519 (521) T protein:vir:10 476 KYLSHEYVMKNILRMSDE----------------DIKTEREKIDGELKDSVYKNPEDPME 519 (521) T ss_pred cccchHHHHHHHhcCCHh----------------HHHHHHHHHHHhhhCCCCCCCcchhh Confidence 34555555553 333211 0000000000010111 0111111 No 233 >protein:vir:5665 Length: 511 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899604;genbank:gi:34419591;genbank:GeneID:2546036 Probab=78.54 E-value=0.11 Score=25.77 Aligned_cols=391 Identities=10% Similarity=0.072 Sum_probs=169.7 Q ss_pred chhhhc-----------cccccccc---cccc----hhHHHhhhcCc----c-ccccc----c-c-cHHHHhccHHHHHH Q lcl|Aclame:pro 3 LERMFE-----------KRSGSSDH---EDGF----NNILLNMFGGR----K-TASGE----R-V-SESNSLVQPDIFAC 53 (416) Q Consensus 3 ~~~~f~-----------~~~~~~~~---~~~~----~~~~~~~~~~~----~-~~~~~----~-~-~~~~a~~~~~v~~~ 53 (416) |+.|-+ .+..+-.+ .++. .+......++. . ...+. . + ..+..+.+|.|..| T Consensus 1 ~~~w~~~de~~~~~~~~~~~~S~~~p~~~DGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~pEvd~A 80 (511) T protein:vir:56 1 MKFWTKEEEQDIQKIEKNPVRSFSAPDNVDGAKEIHTNLLAPQLGHAIIPSDAQSEGTIPVKELIKSYRALAEYHEVDDA 80 (511) T ss_pred CCCccchhhhhhhhhccCCcccccCCCCCCCceEEecccccceecceeccccccccCccchHHHHHHHHHHhhccchhhH Confidence 222222 11111111 1110 00001111111 0 11111 0 1 23556679999999 Q ss_pred HHHHHHhhccCcc-----eEEeecCC---cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCC Q lcl|Aclame:pro 54 VNVLSDDIAKLPI-----HTYKRTDG---GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHG 125 (416) Q Consensus 54 i~~ia~~ia~~~~-----~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g 125 (416) |+.|.+.+.-..- .+--.+-+ +.+..+.....+.+ . .++...--..++..|...|..|..++-+..- T Consensus 81 v~eIvne~iv~d~~~~pV~l~ld~~~~s~~iK~kI~eeF~~Il-~----ll~F~~~~~~~fR~WYVDgRi~fHkiid~k~ 155 (511) T protein:vir:56 81 IQEIVDEAIVYENDKEVVWLNLDNTDFSENIKAKINEEFDRVV-S----LLQMRKHGYKWFRKWYVDSRIYFHKILDKDN 155 (511) T ss_pred HHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhhhhcceEEEEEEecccc Confidence 9999988764321 11110000 00000000111111 1 1222333344566777889999988766554 Q ss_pred cEEEEEeeccceEEEEEcC-----------CCcEEEEEEeeC--------------CeeEEechhheeeecc----CCCC Q lcl|Aclame:pro 126 YPEALFPLRPDYTNAYVHP-----------TTGMLWYQTVLN--------------GKAIELYDYEVLHFKG----LSTD 176 (416) Q Consensus 126 ~~~~l~~l~p~~v~~~~~~-----------~~~~~~~~~~~~--------------~~~~~~~~~~vih~~~----~~~~ 176 (416) -+.+|..|+|..++....- .+..-||.|.+. ...+.++.+.|.|... .+.+ T Consensus 156 GI~eLr~lDPr~i~~vr~i~~~~~~~~~v~~~~~ey~~Y~~~~~~~~~~~~~~~~~~~~vkI~~daI~y~hSGL~d~~~~ 235 (511) T protein:vir:56 156 NIIELRPLNPMKMELVREIQKETIDGVEVVKGTLEYYVYKQSDYKMPSWMSATNRAQTSFRIPKDAIVFAHSGLMRGCAD 235 (511) T ss_pred ceeehhhcCcccchhhhhhhcccccccccccceeeeeEecCCCcccCcccccccccccceeechhheeeecccceeccCC Confidence 5889999999888764331 111223444321 1346788888866542 1244 Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CCce----- Q lcl|Aclame:pro 177 GIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VENI----- 242 (416) Q Consensus 177 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~~~----- 242 (416) .-+.+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+....| .|.+ T Consensus 236 ~g~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~kNklVYDa~TGev~ddrk 315 (511) T protein:vir:56 236 DPYIIGYLDRAIKPANQLKMLEDALVIYRLARAPERRVFYVDVGNLPTQKAQQYVNGIMQNVKNRVVYDTQTGQVKNTTN 315 (511) T ss_pred CCeeeccchhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCceeccchh Confidence 556788999999988888888887765444444434444443 333 33344444544443321 1211 Q ss_pred ---------eec---CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccC-CCc-----ccHHHHHHHHH Q lcl|Aclame:pro 243 ---------AII---DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDK-ATF-----SNIEHQSIEYV 304 (416) Q Consensus 243 ---------~vl---~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~-~~~-----s~~e~~~~~f~ 304 (416) +.- ..|.+++.|.. .+.+.-++-.++..+.+.++++||.+-|...+. +.+ +-..-.-..|. T Consensus 316 ~msMlEDyWLpRReGgrgTEItTLpG-gqnlgem~DV~YF~kKLy~aLnVP~SRl~~e~q~~~f~~Gr~~EItRDEiKF~ 394 (511) T protein:vir:56 316 AMSMLEDYYLPRREGSKGTEVSTLPG-GQSLGDIEDVLYFNRKLYKAMRIPTSRAASEDQTGGINFGQGAEITRDELKFT 394 (511) T ss_pred hhhhHhhhcccccCCCCccceeeccc-cCCcChHHHHHHHHHHHHHHhCCCcccccCCCCccccccccchhhhHHHHHHH Confidence 111 13455555543 222333455567889999999999999974321 111 11111111232 Q ss_pred HHHHHHHHHHHHHHHHHhh----c-----Cchhccc-ccchhhhhhhhhhccH-------HHHHHHHHHH--HhCCCcCH Q lcl|Aclame:pro 305 RNTLQPWIVNFEQELNVKL----F-----LDHDQKS-GHYVKFNIDSELRGDS-------KTQAEYLKTL--HETGVLNK 365 (416) Q Consensus 305 ~~~l~P~~~~i~~~l~~~l----~-----~~~~~~~-~~~~~f~~~~l~~~d~-------~~~~~~~~~~--~~~g~~t~ 365 (416) .+ |.-+...++..|..-| + ++.++.. ...|+|++..--.... ..+++.+..+ +-+-.++. T Consensus 395 KF-I~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~ 473 (511) T protein:vir:56 395 KF-VKRLQTKFETVITDPLKHQLIVNNIITEEEWDANHEKLYVVFNQDSYFEEAKELEILNSRMNAMRDIQDYAGKYYSH 473 (511) T ss_pred HH-HHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhcchhccccch Confidence 22 5555555555554433 2 2222221 1233333322111111 1222222222 11122344 Q ss_pred HHHHHH-hCCCCCCCCCeEeeccCccccccccccccccCCcccCC-CCccCCC Q lcl|Aclame:pro 366 DEIREL-LERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKG-GDNKNEG 416 (416) Q Consensus 366 NE~R~~-~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~g-ge~~~~~ 416 (416) +=+|+. |.+.-. .+ .+.+.+-+.+..++ =.+.++| T Consensus 474 ~yi~k~ILr~tDe-------------ei---~~~~k~I~~E~k~~~~~~~e~~ 510 (511) T protein:vir:56 474 KYIQKNILRLSDD-------------QI---TAMQSEIDEEETNPRFQQDDQG 510 (511) T ss_pred HHHHHHHhccCHH-------------HH---HHHHHHHHHhhcCCCCCCcccC Confidence 444442 222110 00 00000000000011 1223333 No 234 >protein:vir:4995 Length: 384 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049969;genbank:gi:9632941;genbank:GeneID:1262104 Probab=78.01 E-value=0.12 Score=25.66 Aligned_cols=347 Identities=9% Similarity=0.002 Sum_probs=118.5 Q ss_pred hhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccCcceEEeecCCcceeeeccc Q lcl|Aclame:pro 4 ERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGIERKPEHK 83 (416) Q Consensus 4 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~ 83 (416) =++|.++.............+.+....... +. .....+... .++.. ++...+.+.+-.- .... . | T Consensus 1 Mglf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~v~~---~~al~-~~~V~~~i~~Ia~-----~ia~-l--~ 65 (384) T protein:vir:49 1 MPIFNITNLATESPPSNQDSFFDITDPEFL--DA-LNGSEWVSA---ETALK-NSDLFSIISQLSN-----DLAT-A--K 65 (384) T ss_pred CccccccccCcccccccchhhccccchhhc--cc-ccCCceech---hhhhc-cHHHHHHHHHHHH-----HHhh-C--c Confidence 444443322211111111111110000000 00 000000000 00000 0000000000000 0000 0 0 Q ss_pred hhhhhccccccc-----cCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcCCCcEEE-EEEeeCC Q lcl|Aclame:pro 84 SAHAVYARPNPY-----MTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLW-YQTVLNG 157 (416) Q Consensus 84 ~~~~l~~~PN~~-----~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~~~~~~~-~~~~~~~ 157 (416) . .+ .+.... =+..+=...+...+... +..-.-..+.+..+..|.+.. +.+.... T Consensus 66 ~--~~-~~~~~~~l~~~PN~~~t~~~f~~~l~~~-----------------lll~Gna~~~i~r~~~g~~~~L~~l~~~~ 125 (384) T protein:vir:49 66 I--TT-SRKQLQGIVDNPSNNANRFNFYQSIFAQ-----------------MLLGGEAFAYRWRNENGRDMKWEYLRPSQ 125 (384) T ss_pred e--ee-ecchhhhhhhccCCCCCHHHHHHHHHHH-----------------hhhcCCeEEEEEECCCCcEEEEEEEcCce Confidence 0 00 000000 00000011111111110 111111122233344443211 1111111 Q ss_pred eeEEechh-heee--ec----------cCCCC---ccccccHH---H--HHHHHHHHHHHHHHHHHHHHhccCCcceeec Q lcl|Aclame:pro 158 KAIELYDY-EVLH--FK----------GLSTD---GIHGKSPI---G--VVREHIGAQAAATKYNAKLYKNEATPRGILK 216 (416) Q Consensus 158 ~~~~~~~~-~vih--~~----------~~~~~---~~~G~s~~---~--~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~ 216 (416) ..+....+ ..+. +. .++.+ .+.+.++. . +....+...........++..+-..-++... T Consensus 126 v~v~~~~~~~~~~y~~~~~~~~~~~~~~~~~~eVih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~ 205 (384) T protein:vir:49 126 VSFNRLDNQNGLYYNITFDDPRIPPKQHVPQGDILHFRLLSVDGGLTSVSPLMALGRELNIQKASDKLTLNALKNALNAN 205 (384) T ss_pred eEEEEcCCCceEEEEEEecCccccceeEecCccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCc Confidence 11111111 1111 10 01111 12232221 1 2222333333333333333333222111111 Q ss_pred cC-CcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHH--HHHH--HHHHHHHHHHHhccchhhccccc-- Q lcl|Aclame:pro 217 VP-AFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQ--FVES--MKFNKAQISMIYKVPLHKLNELD-- 289 (416) Q Consensus 217 ~~-~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~--~~e~--~~~~~~~Ia~~~gvp~~~lg~~~-- 289 (416) .= ..-.....++.++.+.....+.. -.++.-+.+-.+....++ ..+. .+.....+-.+ ...+|... T Consensus 206 ~il~~~~~~~~~~~~~~~~~~~~~~~---n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~I----a~~fgVp~~~ 278 (384) T protein:vir:49 206 GILKIKGGGLLDFKTKQSRSRQAMKQ---MQGGPLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQF----AKVYGIPESV 278 (384) T ss_pred eEEEeCCCCChHHHHHHHHHHHhccc---CCccceecCCCceEEEccCChhhHHHHHHHHHHHHHH----HHHhCCCHHH Confidence 10 11123334454444444333221 122222222233222222 1121 12122222222 23334322 Q ss_pred --CCCcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHH Q lcl|Aclame:pro 290 --KATFS-NIEHQSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKD 366 (416) Q Consensus 290 --~~~~s-~~e~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~N 366 (416) ....+ +..+..+.++..+|.|.+..|.++|+.+|... +.++.......+..........+++++++|+| T Consensus 279 lg~~~~~~~~~~~~~~~~~~~i~~~l~pi~~~i~~~l~~~--------l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~ 350 (384) T protein:vir:49 279 VGGEGDKQSSLEMIYNIYFKAVSRFLRPFVSELSKKLSCE--------VDADILPAVDPTGSNYIGLINSMVKTGTLAQN 350 (384) T ss_pred hCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHhchh--------hhhhhhhhhhccchHHHHHHHHHhhcCcccHH Confidence 22222 22456678999999999999999999988653 33333333444444555567778999999999 Q ss_pred HHHHHhCCCCCCCCCeEeeccCccccccccccccccCCcccCCCCccCCC Q lcl|Aclame:pro 367 EIRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 367 E~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~~ 416 (416) |+|+.++..++.. +++.--.++.| .+|||++++= T Consensus 351 e~~~~l~~~g~~~-ne~r~~~~~~p---------------~~gGd~~~~~ 384 (384) T protein:vir:49 351 QGLYVLQQAEILP-KDLPEGETDST---------------LKGGETNEQY 384 (384) T ss_pred HHHHHHhhCCCCC-hhHHHHcCCCC---------------CCCCCCCCCC Confidence 9999998776543 33333333333 4678888877 No 235 >protein:vir:101806 Length: 516 # NCBI annotation: gp20 # Family: family:all:1036 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238883;genbank:gi:66391958;genbank:GeneID:3416633 Probab=74.88 E-value=0.15 Score=25.05 Aligned_cols=394 Identities=9% Similarity=0.035 Sum_probs=172.7 Q ss_pred Ccchhhhcccc---------------ccccccccchhH-HH------hhhcCc----ccccccc------c-cHHHHhcc Q lcl|Aclame:pro 1 MLLERMFEKRS---------------GSSDHEDGFNNI-LL------NMFGGR----KTASGER------V-SESNSLVQ 47 (416) Q Consensus 1 m~~~~~f~~~~---------------~~~~~~~~~~~~-~~------~~~~~~----~~~~~~~------~-~~~~a~~~ 47 (416) |-+.++|+... .+-.+...-+.. .+ ...++. ....+.. + ..+..+.+ T Consensus 1 ~~~~~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~ 80 (516) T protein:vir:10 1 MKFLDLFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQLINN 80 (516) T ss_pred CCchHhcccccchhhhHHhhhhcCCcCcccCCCCCCCceeeecCCCcccccceeeeeeccccccchHHHHHHHHHHHhhc Confidence 77777776411 111111110000 00 011111 0001111 1 13456689 Q ss_pred HHHHHHHHHHHHhhccCcc-----eEEeecCC---cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEE Q lcl|Aclame:pro 48 PDIFACVNVLSDDIAKLPI-----HTYKRTDG---GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYI 119 (416) Q Consensus 48 ~~v~~~i~~ia~~ia~~~~-----~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i 119 (416) |.|..||+.|.+.+.-..- .+--.+-+ +.+..+.....+.+ . .++...--..++..|...|..|..+ T Consensus 81 pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~ik~kI~eeF~~Il-~----ll~F~~~~~~~fR~WYVDgRi~fhK 155 (516) T protein:vir:10 81 PEVERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVC-R----LLDASRKLDTLFRRWYVDSRIFFHK 155 (516) T ss_pred cchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhhhhcceEEEEE Confidence 9999999999988764321 11110000 00000000111111 1 1222233344566777889998885 Q ss_pred eec-CCCcEEEEEeeccceEEEEEcC-----CCcE------EEEEEee-------------CCeeEEechhheeeec--c Q lcl|Aclame:pro 120 QFG-SHGYPEALFPLRPDYTNAYVHP-----TTGM------LWYQTVL-------------NGKAIELYDYEVLHFK--G 172 (416) Q Consensus 120 ~r~-~~g~~~~l~~l~p~~v~~~~~~-----~~~~------~~~~~~~-------------~~~~~~~~~~~vih~~--~ 172 (416) +.+ ...-+.+|..|+|..++....- .|.. .+|.|.. .+..+.++.+-|.+.. . T Consensus 156 iid~~k~GI~Elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSGL 235 (516) T protein:vir:10 156 IMPNPKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSGL 235 (516) T ss_pred EecCccccceeeeeeCCcceeeEeeecccccccchhhhhhhheeeeccCccccccccceeCCCcceeechhheeeecccc Confidence 443 3344889999999988865432 1111 1222221 1234556666655544 1 Q ss_pred CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CCce- Q lcl|Aclame:pro 173 LSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VENI- 242 (416) Q Consensus 173 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~~~- 242 (416) ...++-.-+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .|.+ T Consensus 236 ~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ 315 (516) T protein:vir:10 236 MDCSDRGIIGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTVK 315 (516) T ss_pred eeCCCCceeeeehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeec Confidence 2333333478888888888888888777764444444334444443 333 33344444444443322 1211 Q ss_pred -------------eecC---CCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc--ccH-HHHHH-H Q lcl|Aclame:pro 243 -------------AIID---YGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF--SNI-EHQSI-E 302 (416) Q Consensus 243 -------------~vl~---~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~--s~~-e~~~~-~ 302 (416) +.-- .|.+++.|.. .+.+.-++-.++..+.+.++++||.+-|....+++. +.. |=.+. . T Consensus 316 ddrk~msMlEDyWLpRReGgrgTEItTLpG-gqnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDEi 394 (516) T protein:vir:10 316 NQKRNLSMTEDYWLMRRDGKSVTEVSSLPG-AQTMGDMDDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRDEL 394 (516) T ss_pred cchhhhhhHhhhcccccCCCCccceeeccc-cCCcChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHHH Confidence 1111 3455555543 222333455567889999999999999975443221 111 11111 2 Q ss_pred HHHHHHHHHHHHHHHHHHHhhc---------Cchhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHHH--hCCCc Q lcl|Aclame:pro 303 YVRNTLQPWIVNFEQELNVKLF---------LDHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTLH--ETGVL 363 (416) Q Consensus 303 f~~~~l~P~~~~i~~~l~~~l~---------~~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~~--~~g~~ 363 (416) -...-|.-+...++..|..-|- ++.++.. ...|+|++..--... +..+++.+..+- -+.++ T Consensus 395 KF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~ 474 (516) T protein:vir:10 395 DFRKFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGKYV 474 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 2222355555555555554332 2222221 223333332211111 123333333331 34566 Q ss_pred CHHHHHHH-hCCCCCCCCCeEeeccCccccccccccccccCCcccCC--CCccCCC Q lcl|Aclame:pro 364 NKDEIREL-LERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKG--GDNKNEG 416 (416) Q Consensus 364 t~NE~R~~-~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~g--ge~~~~~ 416 (416) +.+=+|+. |.++-.+ ..+.+.+-+.+..+| -+.+++. T Consensus 475 s~~yi~k~ILr~tDee----------------i~~e~k~I~~E~~~~~~~~p~~~~ 514 (516) T protein:vir:10 475 SHDYVMKNILQMTEEQ----------------IAQEEKQIEQEAGIKRFQNPENED 514 (516) T ss_pred chHHHHHHHhcCCHhh----------------HHHHHHHHHHhhhCCCCCCCCccc Confidence 66666653 4433210 000000000011111 1111112 No 236 >protein:vir:101189 Length: 516 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932511;genbank:gi:37651637;genbank:GeneID:2610682 Probab=74.88 E-value=0.15 Score=25.05 Aligned_cols=394 Identities=9% Similarity=0.035 Sum_probs=172.7 Q ss_pred Ccchhhhcccc---------------ccccccccchhH-HH------hhhcCc----ccccccc------c-cHHHHhcc Q lcl|Aclame:pro 1 MLLERMFEKRS---------------GSSDHEDGFNNI-LL------NMFGGR----KTASGER------V-SESNSLVQ 47 (416) Q Consensus 1 m~~~~~f~~~~---------------~~~~~~~~~~~~-~~------~~~~~~----~~~~~~~------~-~~~~a~~~ 47 (416) |-+.++|+... .+-.+...-+.. .+ ...++. ....+.. + ..+..+.+ T Consensus 1 ~~~~~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~ 80 (516) T protein:vir:10 1 MKFLDLFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQLINN 80 (516) T ss_pred CCchHhcccccchhhhHHhhhhcCCcCcccCCCCCCCceeeecCCCcccccceeeeeeccccccchHHHHHHHHHHHhhc Confidence 77777776411 111111110000 00 011111 0001111 1 13456689 Q ss_pred HHHHHHHHHHHHhhccCcc-----eEEeecCC---cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEE Q lcl|Aclame:pro 48 PDIFACVNVLSDDIAKLPI-----HTYKRTDG---GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYI 119 (416) Q Consensus 48 ~~v~~~i~~ia~~ia~~~~-----~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i 119 (416) |.|..||+.|.+.+.-..- .+--.+-+ +.+..+.....+.+ . .++...--..++..|...|..|..+ T Consensus 81 pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~ik~kI~eeF~~Il-~----ll~F~~~~~~~fR~WYVDgRi~fhK 155 (516) T protein:vir:10 81 PEVERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVC-R----LLDASRKLDTLFRRWYVDSRIFFHK 155 (516) T ss_pred cchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhhhhcceEEEEE Confidence 9999999999988764321 11110000 00000000111111 1 1222233344566777889998885 Q ss_pred eec-CCCcEEEEEeeccceEEEEEcC-----CCcE------EEEEEee-------------CCeeEEechhheeeec--c Q lcl|Aclame:pro 120 QFG-SHGYPEALFPLRPDYTNAYVHP-----TTGM------LWYQTVL-------------NGKAIELYDYEVLHFK--G 172 (416) Q Consensus 120 ~r~-~~g~~~~l~~l~p~~v~~~~~~-----~~~~------~~~~~~~-------------~~~~~~~~~~~vih~~--~ 172 (416) +.+ ...-+.+|..|+|..++....- .|.. .+|.|.. .+..+.++.+-|.+.. . T Consensus 156 iid~~k~GI~Elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSGL 235 (516) T protein:vir:10 156 IMPNPKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSGL 235 (516) T ss_pred EecCccccceeeeeeCCcceeeEeeecccccccchhhhhhhheeeeccCccccccccceeCCCcceeechhheeeecccc Confidence 443 3344889999999988865432 1111 1222221 1234556666655544 1 Q ss_pred CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CCce- Q lcl|Aclame:pro 173 LSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VENI- 242 (416) Q Consensus 173 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~~~- 242 (416) ...++-.-+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .|.+ T Consensus 236 ~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ 315 (516) T protein:vir:10 236 MDCSDRGIIGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTVK 315 (516) T ss_pred eeCCCCceeeeehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeec Confidence 2333333478888888888888888777764444444334444443 333 33344444444443322 1211 Q ss_pred -------------eecC---CCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCc--ccH-HHHHH-H Q lcl|Aclame:pro 243 -------------AIID---YGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATF--SNI-EHQSI-E 302 (416) Q Consensus 243 -------------~vl~---~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~--s~~-e~~~~-~ 302 (416) +.-- .|.+++.|.. .+.+.-++-.++..+.+.++++||.+-|....+++. +.. |=.+. . T Consensus 316 ddrk~msMlEDyWLpRReGgrgTEItTLpG-gqnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDEi 394 (516) T protein:vir:10 316 NQKRNLSMTEDYWLMRRDGKSVTEVSSLPG-AQTMGDMDDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRDEL 394 (516) T ss_pred cchhhhhhHhhhcccccCCCCccceeeccc-cCCcChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHHH Confidence 1111 3455555543 222333455567889999999999999975443221 111 11111 2 Q ss_pred HHHHHHHHHHHHHHHHHHHhhc---------Cchhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHHH--hCCCc Q lcl|Aclame:pro 303 YVRNTLQPWIVNFEQELNVKLF---------LDHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTLH--ETGVL 363 (416) Q Consensus 303 f~~~~l~P~~~~i~~~l~~~l~---------~~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~~--~~g~~ 363 (416) -...-|.-+...++..|..-|- ++.++.. ...|+|++..--... +..+++.+..+- -+.++ T Consensus 395 KF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~ 474 (516) T protein:vir:10 395 DFRKFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGKYV 474 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 2222355555555555554332 2222221 223333332211111 123333333331 34566 Q ss_pred CHHHHHHH-hCCCCCCCCCeEeeccCccccccccccccccCCcccCC--CCccCCC Q lcl|Aclame:pro 364 NKDEIREL-LERNPIENGDKYISSLNYVFLDFLEEYQRLKAGGAMKG--GDNKNEG 416 (416) Q Consensus 364 t~NE~R~~-~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~g--ge~~~~~ 416 (416) +.+=+|+. |.++-.+ ..+.+.+-+.+..+| -+.+++. T Consensus 475 s~~yi~k~ILr~tDee----------------i~~e~k~I~~E~~~~~~~~p~~~~ 514 (516) T protein:vir:10 475 SHDYVMKNILQMTEEQ----------------IAQEEKQIEQEAGIKRFQNPENED 514 (516) T ss_pred chHHHHHHHhcCCHhh----------------HHHHHHHHHHhhhCCCCCCCCccc Confidence 66666653 4433210 000000000011111 1111112 No 237 >protein:vir:104892 Length: 558 # NCBI annotation: T4-like capsid assembly protein # Family: family:all:1036 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214363;genbank:gi:61806003;genbank:GeneID:3294412 Probab=73.32 E-value=0.17 Score=24.78 Aligned_cols=406 Identities=10% Similarity=0.055 Sum_probs=160.9 Q ss_pred Ccchhhhcc------ccccc---cccccchhHHHhhhcCcccc-cccc------c-cHHHHhccHHHHHHHHHHHHhhcc Q lcl|Aclame:pro 1 MLLERMFEK------RSGSS---DHEDGFNNILLNMFGGRKTA-SGER------V-SESNSLVQPDIFACVNVLSDDIAK 63 (416) Q Consensus 1 m~~~~~f~~------~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~------~-~~~~a~~~~~v~~~i~~ia~~ia~ 63 (416) |.|+ ++. +..+. ....+......+.+.+.... .+.. + ..+..+.+|.|..||+.|.+.+.- T Consensus 5 fgf~--~~~~~~~~~~~~s~~~p~~ddg~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~pEvd~Av~eIVneaiv 82 (558) T protein:vir:10 5 FGFS--IEETQKKSTSIISPVPKNNEDGVDNFISSGFYGQYVDIEGAYRSEYDLIRRYREMALHPEADGAIEDVVNEAIV 82 (558) T ss_pred hcch--hhhhhhhccCCccccCCCccccccceeccceeeeeecccchhhhHHHHHHHHHHHhhccchhhHHHHhhcceeE Confidence 3322 211 11111 11111111111111111100 0111 1 134556799999999999988764 Q ss_pred Ccce-----EEeecCCc---ceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC---CcEEEEEe Q lcl|Aclame:pro 64 LPIH-----TYKRTDGG---IERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH---GYPEALFP 132 (416) Q Consensus 64 ~~~~-----~~~~~~~~---~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~---g~~~~l~~ 132 (416) ..-. +--.+-+. ....+.....+.+ . .++...--..+++.|...|..|..++.+.. .-+.+|.. T Consensus 83 ~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il-~----ll~F~~~~~e~fR~WYVDgRiyfHKiid~k~pk~GI~ELr~ 157 (558) T protein:vir:10 83 SDLYDSPVEVELSNLNASNTLKKKIREEFRYIK-E----MMDFDKKSHEIFRNWYVDGRVFYLKVIDTKNPQEGIQDLRY 157 (558) T ss_pred ecCCCceEEEEecccCcchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhheeeeEEEEEEEEeCCCccccceeeee Confidence 3221 11110000 0000001111111 1 122233334556677888999988865422 23789999 Q ss_pred eccceEEEEEcC----------------CC------cEEEEEEeeC-------------CeeEEechhheeeecc--CCC Q lcl|Aclame:pro 133 LRPDYTNAYVHP----------------TT------GMLWYQTVLN-------------GKAIELYDYEVLHFKG--LST 175 (416) Q Consensus 133 l~p~~v~~~~~~----------------~~------~~~~~~~~~~-------------~~~~~~~~~~vih~~~--~~~ 175 (416) |+|..++..... .+ ...||.|... +..+.++.+-|..... ... T Consensus 158 lDPr~i~~Vr~i~~~~~~~~~~~~~~~~~~~~~~~~~~eyy~Y~~~~~~~~~~~~~~~~~~~vkI~~dAI~y~hSGL~d~ 237 (558) T protein:vir:10 158 IDPLKIKFIRQEKRKPGNQDPAIRVRSEQDVVPNPEFEEFYIYTPKVQHPTGMVGQMGGKNSIKIAKDSITMCTSGLVDR 237 (558) T ss_pred eCcccceeeeeeccccccccceeeeecccceeeccceeEeeeecCCcccccccceeecCCCceeechhheeeecccceec Confidence 999988654432 01 1123333322 1223444444333221 112 Q ss_pred CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CCce---- Q lcl|Aclame:pro 176 DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VENI---- 242 (416) Q Consensus 176 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~~~---- 242 (416) ++-.-+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .|.+ T Consensus 238 ~~~~i~syLhkAIKp~NQLkmlEDAlVIYRitRAPERRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddr 317 (558) T protein:vir:10 238 NKNRVLSYLHKAIKALNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKVKAEQYLKEVMSRYRNKLVYDANTGEVRDDR 317 (558) T ss_pred CCCeeeecchHhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccc Confidence 3334567888888888888777777664444444334444443 333 33333444444443321 1211 Q ss_pred ----------eec---CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH---HHHHHHH Q lcl|Aclame:pro 243 ----------AII---DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ---SIEYVRN 306 (416) Q Consensus 243 ----------~vl---~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~---~~~f~~~ 306 (416) +.- ..|.+++.|... ..+.-++-.++..+.+.++++||.+-|.....-+.....+- -..|..+ T Consensus 318 k~msMlEDyWLpRReGgrgTEItTLpGg-qnLgem~DV~YF~kKLy~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~KF 396 (558) T protein:vir:10 318 KFMSMMEDFWLPRREGGRGTEITTLPGG-QNLGELSDVDYFQKKLYRALGVPESRIAAEGGFNLGRSSEILRDELKFAKF 396 (558) T ss_pred hhhhhHhhhcccccCCCCccceeecccc-CCcchHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHHHH Confidence 111 234555555432 23333445567889999999999999974332222222111 1122222 Q ss_pred HHHHHHHHHHHHHHHhh----c-----Cchhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHHH--hCCCcCHHH Q lcl|Aclame:pro 307 TLQPWIVNFEQELNVKL----F-----LDHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTLH--ETGVLNKDE 367 (416) Q Consensus 307 ~l~P~~~~i~~~l~~~l----~-----~~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~~--~~g~~t~NE 367 (416) |.-+...++..|..-| + ++.++.. ...|+|++..--... +..+++.+..+- -+-.++.+= T Consensus 397 -I~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~dy 475 (558) T protein:vir:10 397 -VGRLRKRFAAMFNDMLKTQLVLKNIVTPEDWKTMEDHIQYDFLYDNQFAELKESELMEGRLGMLATIEPYIGKYYSTEY 475 (558) T ss_pred -HHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchHH Confidence 5555555555554433 2 2223221 123333332210111 122333333221 112223333 Q ss_pred HHHH-hCCC--------------------CCCCCCeEeeccCcccc-ccccccccccCC--cccCCCCccCCC Q lcl|Aclame:pro 368 IREL-LERN--------------------PIENGDKYISSLNYVFL-DFLEEYQRLKAG--GAMKGGDNKNEG 416 (416) Q Consensus 368 ~R~~-~gl~--------------------p~~ggd~~~~~~n~~~~-~~~~~~~~~~~~--~~~~gge~~~~~ 416 (416) +|+. |.+. +.|.-..... +...|. +++........+ +..++...+-+. T Consensus 476 i~k~ILr~tDeeI~~~~kqI~~E~k~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (558) T protein:vir:10 476 VRKRVLRQTDMEIEEIDTQIEDEIQKGIIPDPSQIDPIT-GEPLPQEGDPAMEGMGEQPVDPDLEAQAQAVDA 547 (558) T ss_pred HHHHHhccCHHHHHHHHHHHHHHHhCCCCCCccccChhh-ccccCccCCchhccCCCCCcccccccchhhhhh Confidence 3321 2221 1111111110 000000 000000000000 000110000000 No 238 >protein:vir:7208 Length: 524 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:142 # MgeName: T4 # Cross-refs: genbank:acc:NP_049782;genbank:gi:9632594;genbank:GeneID:1258582 Probab=72.95 E-value=0.18 Score=24.72 Aligned_cols=395 Identities=10% Similarity=0.079 Sum_probs=162.3 Q ss_pred Ccc--hhhhccccc---------------ccc-c--cc--------------cchhHHHhhhcCcccc--cccc-c-cHH Q lcl|Aclame:pro 1 MLL--ERMFEKRSG---------------SSD-H--ED--------------GFNNILLNMFGGRKTA--SGER-V-SES 42 (416) Q Consensus 1 m~~--~~~f~~~~~---------------~~~-~--~~--------------~~~~~~~~~~~~~~~~--~~~~-~-~~~ 42 (416) |-| .++|+.... +.. + .+ ++.....+++++.-.. +... + ..+ T Consensus 1 m~~~~L~~~~~w~~~de~~~~~~~~~~~~S~~~p~~~Dga~e~~~~~~~~a~~~~g~~~~~~g~~e~~~~~~~eLI~~YR 80 (524) T protein:vir:72 1 MKFNVLSLFAPWAKMDERNFKDQEKEDLVSITAPKLDDGAREFEVSSNEAASPYNAAFQTIFGSYEPGMKTTRELIDTYR 80 (524) T ss_pred CCCchhhHhhccccCcchhhhhhhccCCccccCccCCCCceeeeecccccccccceeeeehhcccccccchHHHHHHHHH Confidence 444 233432110 110 0 00 0111111111110000 0000 1 234 Q ss_pred HHhccHHHHHHHHHHHHhhccCcc-----eEEeecCC---cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCC Q lcl|Aclame:pro 43 NSLVQPDIFACVNVLSDDIAKLPI-----HTYKRTDG---GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGN 114 (416) Q Consensus 43 ~a~~~~~v~~~i~~ia~~ia~~~~-----~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~ 114 (416) ..+.+|.|..||+.|.+.+.-..- .+--.+-+ ..+..+.....+.| . .++...--..++..|...|. T Consensus 81 ~ma~~pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il-~----ll~F~~~~~~~fR~WYVDgR 155 (524) T protein:vir:72 81 NLMNNYEVDNAVSEIVSDAIVYEDDTEVVALNLDKSKFSPKIKNMMLDEFSDVL-N----HLSFQRKGSDHFRRWYVDSR 155 (524) T ss_pred HHhhccchhhHHHHhhcceeEecCCCceEEEEecCcCcchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhheeeeE Confidence 567899999999999988754321 11110000 00000000111111 1 12223333445667778899 Q ss_pred eEEEEeecCC---CcEEEEEeeccceEEEEEc----CCCc-------EEEEEEee-------------CCeeEEechhhe Q lcl|Aclame:pro 115 AYSYIQFGSH---GYPEALFPLRPDYTNAYVH----PTTG-------MLWYQTVL-------------NGKAIELYDYEV 167 (416) Q Consensus 115 ~~~~i~r~~~---g~~~~l~~l~p~~v~~~~~----~~~~-------~~~~~~~~-------------~~~~~~~~~~~v 167 (416) .|..++-+.. .-+.+|..|+|..++.... ..++ .-+|.|.. .+..+.++.+-| T Consensus 156 i~fhKiid~k~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~y~~~g~~~~~~~~ikI~~dAI 235 (524) T protein:vir:72 156 IFFHKIIDPKRPKEGIKELRRLDPRQVQYVREIITETEAGTKIVKGYKEYFIYDTAHESYACDGRMYEAGTKIKIPKAAV 235 (524) T ss_pred EEEEEEEeCCCccccceeeeeeCCccceeeeeeccCCCccchhhcchhhheeeccCccccccCccccCCCcceecchhhe Confidence 9988865422 2378999999999876322 1111 11223321 123455666665 Q ss_pred eeecc--CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc----- Q lcl|Aclame:pro 168 LHFKG--LSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK----- 238 (416) Q Consensus 168 ih~~~--~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~----- 238 (416) .+... .+.++-.-+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| T Consensus 236 ~y~hSGL~d~~~~~i~gyLhkAiKp~NQLkmlEDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~KNklvYD 315 (524) T protein:vir:72 236 VYAHSGLVDCCGKNIIGYLHRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAAEHMQHVMNTMKNRVVYD 315 (524) T ss_pred eeeeccceeCCCCceeccchhhhHhHHhhhHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEe Confidence 55441 1223334577888888888888777777664444444334444443 333 33344444444443322 Q ss_pred --CCce--------------eec---CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCC--C--cc- Q lcl|Aclame:pro 239 --VENI--------------AII---DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKA--T--FS- 294 (416) Q Consensus 239 --~~~~--------------~vl---~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~--~--~s- 294 (416) .|.+ +.- ..|.+++.|.. ...+.-++-.++..+.+.++++||.+-|.....+ + .+ T Consensus 316 a~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpG-gqnlgem~DV~YF~kkLy~aLnVP~sRl~~d~~~~f~~gr~~ 394 (524) T protein:vir:72 316 ASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTLPG-ADNTGNMEDIRWFRQALYMALRVPLSRIPQDQQGGVMFDSGT 394 (524) T ss_pred CCCCeeccchhhhhhHhhhcccccCCCcccceeeccc-cCCcChHHHHHHHHHHHHHHhCCchhhcCCCCCccccccccc Confidence 1211 111 13455555543 2223334455678899999999999999432111 1 11 Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhh----c-----Cchhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHH Q lcl|Aclame:pro 295 NIEHQSIEYVRNTLQPWIVNFEQELNVKL----F-----LDHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTL 357 (416) Q Consensus 295 ~~e~~~~~f~~~~l~P~~~~i~~~l~~~l----~-----~~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~ 357 (416) ...-.-..|..+ |.-+...++..|..-| + ++.++.. ...|+|++..--... +..+++.+..+ T Consensus 395 EItRDEikF~KF-I~rLR~rFs~~f~~~Lk~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~ 473 (524) T protein:vir:72 395 SITRDELTFAKF-IRELQHKFEEVFLDPLKTNLLLKGIITEDEWNDEINNIKIEFHRDSYFAELKEAEILERRINMLTMA 473 (524) T ss_pred hhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHh Confidence 111111123222 5555555555554433 2 2222221 123333332211111 12222222222 Q ss_pred H--hCCCcCHHHHHHH-hCCCCCCCCCeEeeccCccccccccc--cccccCCcccCCCCccCCC Q lcl|Aclame:pro 358 H--ETGVLNKDEIREL-LERNPIENGDKYISSLNYVFLDFLEE--YQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 358 ~--~~g~~t~NE~R~~-~gl~p~~ggd~~~~~~n~~~~~~~~~--~~~~~~~~~~~gge~~~~~ 416 (416) - -+-.++.+=+|+. |.+.-. .+..... .++.+.+--.+ .+.+.+- T Consensus 474 dpyvGky~s~~yi~k~ILr~tDe-------------ei~~~~k~I~~E~k~~~~~~-~~~~~~~ 523 (524) T protein:vir:72 474 EPFIGKYISHRTAMKDILQMTDE-------------EIEQEAKQIEEESKEARFQD-PDQEQED 523 (524) T ss_pred hhhhcccchhHHHHHHHhccCHH-------------HHHHHHHHHHHHhhcCCCCC-Cchhhhc Confidence 1 1122344444432 222110 0000000 00011110000 1111111 No 239 >protein:vir:94709 Length: 522 # NCBI annotation: head to tail connector # Family: family:all:481 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338118;genbank:gi:77118196;genbank:GeneID:3707732 Probab=72.30 E-value=0.18 Score=24.61 Aligned_cols=388 Identities=10% Similarity=0.027 Sum_probs=154.6 Q ss_pred CcchhhhccccccccccccchhHHHhhhcC----ccccccccccHHHHhccHHHHHHHHHHHHhhccC-----cceEEee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGG----RKTASGERVSESNSLVQPDIFACVNVLSDDIAKL-----PIHTYKR 71 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~-----~~~~~~~ 71 (416) --|+++...|+... ..|. .+..+.-+ ..+...... ..... .++.-.|++.+|+.+.+. ||--... T Consensus 14 ~r~~~l~~~R~~~e---~~w~-e~~~y~lP~~~~~~~~~~~~~-~~~~~-dst~~~a~~~Las~l~~~ltP~~~WFrl~~ 87 (522) T protein:vir:94 14 AVYDRLKNGRQPYE---TRAQ-NCAAVTIPSLFPKESDNSSTE-YTTPW-QAVGARCLNNLAAKLMLALFPQSPWMRLTV 87 (522) T ss_pred HHHHHHHHHhhHHH---HHHH-HHHHHhcccccCCCCCccccc-ccccc-cccHHHHHHHHHHHHHhhcCCCCccccccc Confidence 22333333332211 1111 11111111 111111100 11122 233345566666555432 3322221 Q ss_pred cCCcc---------eeeecc------chhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccc Q lcl|Aclame:pro 72 TDGGI---------ERKPEH------KSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPD 136 (416) Q Consensus 72 ~~~~~---------~~~~~~------~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~ 136 (416) .+... ...... ......+.+-| .+.-+..+..++..+|++..++..+..|.+..+..++-. T Consensus 88 ~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~~~~~~sn----f~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~~~~~~pl~ 163 (522) T protein:vir:94 88 SEYEAKTLSQDSEAAARVDEGLAMVERVLMAYMETNS----FRVPLFEALKQLIVSGNCLLYIPEPEQGTYSPMRMYRLV 163 (522) T ss_pred chhhhhccCcccchhHHHHHHHHHHHHHHHHHHHhcC----cHHHHHHHHHHHHhhCcEeEeeeccCCCceeeEEEEEcc Confidence 11000 000000 01111112233 444555667788899999999887776665544444445 Q ss_pred eEEEEEcCCCcEEE-E-EEee---------------C----CeeEE-------------------------------ech Q lcl|Aclame:pro 137 YTNAYVHPTTGMLW-Y-QTVL---------------N----GKAIE-------------------------------LYD 164 (416) Q Consensus 137 ~v~~~~~~~~~~~~-~-~~~~---------------~----~~~~~-------------------------------~~~ 164 (416) ++.+..+..|.+.- + .... + ...+. +.. T Consensus 164 ~y~v~~d~~G~vd~i~r~~~~~~~~l~~~~~~~~~~~~~~p~~~v~v~~~v~~~~~~~~~~~~~~g~~~~~~~~~~~~~e 243 (522) T protein:vir:94 164 SYVVQRDAFGNILQIVTIDKVAFSALPEDVKSQLNADDYEPDTELEVYTHIYRQDDEYLRYEEVEGIEVTGTDGSYPLTA 243 (522) T ss_pred eEEEeeCCCcCeEEEeeeeeccHHhcchHHHHHHhcccCCccceEEEEEEEEeeCCceeEEeeccCceecccCCCCcccc Confidence 67777776665411 1 0000 0 00000 011 Q ss_pred hheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCcee Q lcl|Aclame:pro 165 YEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIA 243 (416) Q Consensus 165 ~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 243 (416) ...+.+|.... ...||.||...+...+.....+.+.......-...|.+++..++...++... ..+.+.+ T Consensus 244 ~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~~v~~~g~~~~~~~~---------~~~~g~~ 314 (522) T protein:vir:94 244 CPYIPVRMVRLDGEDYGRSYCEEYLGDLNSLETITEAITKMAKVASKVVGLVNPNGITQPRRLN---------KAATGEF 314 (522) T ss_pred CCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeecccccccchhee---------ccCCcee Confidence 12333343322 3479999999999999999999999999999999999888777666554331 1111222 Q ss_pred ec--CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHH--HHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 244 II--DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEH--QSIEYVRNTLQPWIVNFEQEL 319 (416) Q Consensus 244 vl--~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~--~~~~f~~~~l~P~~~~i~~~l 319 (416) +- ++++...++....+-....+..+..+..|..+|-+.. +...+ +..-++++ ++..=....|.|....++++| T Consensus 315 v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~rI~~af~~~~--~~~~~-~~r~TAtEV~~r~~E~~~~LG~v~~rl~~E~ 391 (522) T protein:vir:94 315 VAGRVEDINFLQLTKGQDFTIAKSVADAIEQRLGWAFLLNS--AVQRN-AERVTAEEIRYVAGELEATLGGVYSVQSQEL 391 (522) T ss_pred ecCCcccceeeecccccchhHHHHHHHHHHHHHHHHHhhhh--hccCC-CccccHHHHHHHHHHHHHHHhHHHHHHHHHH Confidence 22 2334555554433333345666777788888886652 22222 21223333 222333344455554444444 Q ss_pred H------------H-hhcCchhcccccchhhhhhhhhh-ccHHHHHHHHHHHHh----CC------CcCHHH----HHHH Q lcl|Aclame:pro 320 N------------V-KLFLDHDQKSGHYVKFNIDSELR-GDSKTQAEYLKTLHE----TG------VLNKDE----IREL 371 (416) Q Consensus 320 ~------------~-~l~~~~~~~~~~~~~f~~~~l~~-~d~~~~~~~~~~~~~----~g------~~t~NE----~R~~ 371 (416) = + .+||+.... . ++.++...+. .-.....+.+...++ -+ -+..++ +.+. T Consensus 392 l~Pli~r~~~il~r~g~lP~~p~~-~--v~v~~~s~La~~qr~~~~~~l~~~~~~ia~l~P~~~~~~id~d~~~~~~a~~ 468 (522) T protein:vir:94 392 QLPIVRVLMNQLQSAGMIPDLPKE-A--VEPTVSTGLEALGRGQDLEKLTQAVNMMTGLQPLSQDPDINLPTLKLRLLNA 468 (522) T ss_pred HHHHHHHHHHHHHhcCCCCCCCcc-c--EEeeEecHHHHHHHHHHHHHHHHHHHHHHhccchhhhhcCCHHHHHHHHHHH Confidence 3 2 233322111 1 2222222211 111111111111111 00 011111 2223 Q ss_pred hCCCCCCCCCeEeeccCccccccc-ccccc-----------ccCCcccCCCCccCCC Q lcl|Aclame:pro 372 LERNPIENGDKYISSLNYVFLDFL-EEYQR-----------LKAGGAMKGGDNKNEG 416 (416) Q Consensus 372 ~gl~p~~ggd~~~~~~n~~~~~~~-~~~~~-----------~~~~~~~~gge~~~~~ 416 (416) +|.||. ..+..+-....+-.. ...+. ....-.++-++.-.++ T Consensus 469 ~Gv~~~---~ivr~~ee~~~~~~q~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 522 (522) T protein:vir:94 469 LGIDTA---GLLLTQDEKIQRMAEQSSQQAVVQGASAAGANMGAAVGQGAGEDMAQA 522 (522) T ss_pred cCCChh---hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccchhhhcC Confidence 344321 011100000000000 00000 0000001111111111 No 240 >protein:vir:108049 Length: 524 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595296;genbank:gi:161622602;genbank:GeneID:5783768 Probab=67.64 E-value=0.25 Score=23.89 Aligned_cols=396 Identities=9% Similarity=0.035 Sum_probs=165.1 Q ss_pred Cc--chhhhc-----------ccccccccc---ccc-------hhHHHhhhcCccc--ccccc------c-cHHHHhccH Q lcl|Aclame:pro 1 ML--LERMFE-----------KRSGSSDHE---DGF-------NNILLNMFGGRKT--ASGER------V-SESNSLVQP 48 (416) Q Consensus 1 m~--~~~~f~-----------~~~~~~~~~---~~~-------~~~~~~~~~~~~~--~~~~~------~-~~~~a~~~~ 48 (416) |. |..|.+ .+..+-.+. ++. ...-.++++++.. ..+.. + ..+..+.+| T Consensus 7 ~~~lf~f~~~~de~~~~~~~~~~~~S~~~p~~~dGa~~I~~~~~~~~~~~~~q~~y~~~e~~~~~~~eLI~~YR~ma~~p 86 (524) T protein:vir:10 7 ILSFLKPWANEDEKEYKQQINNNLESVTAPKLDDGAREIETQEQNIPYNALMQQMFGSNEPEVKNTRELIDTYRNLMNNY 86 (524) T ss_pred HHHHhhhhhcchhhhhhhhhccCCCccccCCCCCCceeeccCcccccchhhhhhhhhcccchhhhHHHHHHHHHHHhhcc Confidence 21 222222 011111111 100 0000011100000 00000 1 234556799 Q ss_pred HHHHHHHHHHHhhccCcc-----eEEeecCC---cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEe Q lcl|Aclame:pro 49 DIFACVNVLSDDIAKLPI-----HTYKRTDG---GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQ 120 (416) Q Consensus 49 ~v~~~i~~ia~~ia~~~~-----~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~ 120 (416) .|..||+.|.+.+.-..- .+--.+-+ +.+..+.....+.| . .++...--..++..|...|..|..++ T Consensus 87 Evd~Av~eIVneaiv~d~~~~pV~l~Ld~~~~s~siK~kI~eeF~~Il-~----ll~F~~~~~~~fR~WYVDgRi~fHki 161 (524) T protein:vir:10 87 EVDNAVQEIVSDAIVYEDDKEVVALNLDGTDFSQSIKDKILAEFSEVL-N----LLNFQRKGTDHFQRWYVDSRIFFHKI 161 (524) T ss_pred chhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhheeeceEEEEEE Confidence 999999999988754321 11110000 00000000111111 1 12222333445667788999999876 Q ss_pred ec-C--CCcEEEEEeeccceEEEEEc----CCCcE-------EEEEEe-------------eCCeeEEechhheeeeccC Q lcl|Aclame:pro 121 FG-S--HGYPEALFPLRPDYTNAYVH----PTTGM-------LWYQTV-------------LNGKAIELYDYEVLHFKGL 173 (416) Q Consensus 121 r~-~--~g~~~~l~~l~p~~v~~~~~----~~~~~-------~~~~~~-------------~~~~~~~~~~~~vih~~~~ 173 (416) -+ + ..-+.+|..|+|..++.... .+++. .+|.|. ..++.+.++.+.|.|...- T Consensus 162 id~~~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~~~~~~~~~~~~~~ikI~~dAIvy~~SG 241 (524) T protein:vir:10 162 INPKKMKDGVQELRRLDPRQVQYIREIVTRMEDGVKIVDGYREFFVYDTGHESYCADGRIYSAGTKVKIPRAAVVYAHSG 241 (524) T ss_pred eeCCCccccceeeeeeCCccceeeeeecccCcccchhhcchhhheeecCCCcccccCcceecCCcceecchhheeeeccC Confidence 54 2 22478999999999876322 12211 122222 2334567888888886632 Q ss_pred --CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CCce Q lcl|Aclame:pro 174 --STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VENI 242 (416) Q Consensus 174 --~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~~~ 242 (416) +.++-.-+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .|.+ T Consensus 242 L~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnlPk~KAeqYl~~im~k~kNKlvYDa~TGev 321 (524) T protein:vir:10 242 LLDCCGKNIIGYLQRAIKPANQLKLMEDAMVIYRITRAPDRRVFYIDTGNMPSRKAAAQMQHIMNTMKNRVVYDASTGKI 321 (524) T ss_pred cccCCCCceeccchHhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeccCCee Confidence 333345578888888888888877777664444444334444443 333 33344444444443321 1211 Q ss_pred --------------eecC---CCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCC--C--ccc-HHHHH Q lcl|Aclame:pro 243 --------------AIID---YGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKA--T--FSN-IEHQS 300 (416) Q Consensus 243 --------------~vl~---~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~--~--~s~-~e~~~ 300 (416) +.-- .|.+++.|.. .+.+.-++-.++..+.+.++++||.+-|+.-..+ + .++ ..-.- T Consensus 322 ~ddrk~msMlEDyWLpRReGgrgTEItTLpG-gqnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~f~~gr~~EItRDE 400 (524) T protein:vir:10 322 KNQQHNMSMTEDYWLQRRDGKAVTEVDTMPG-ATGMSDMDDVLYFRTALYRALRIPESRIPSESNSGVMFDAGTAITRDE 400 (524) T ss_pred ccchhhhhhHhhhcccccCCCCccceeeccc-cCCcChHHHHHHHHHHHHHHhCCCchhccCCCCccccccccchhhHHH Confidence 1111 3455555543 2223334555678899999999999999533221 1 111 11111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh----c-----Cchhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHHH--hCC Q lcl|Aclame:pro 301 IEYVRNTLQPWIVNFEQELNVKL----F-----LDHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTLH--ETG 361 (416) Q Consensus 301 ~~f~~~~l~P~~~~i~~~l~~~l----~-----~~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~~--~~g 361 (416) ..|..+ |.-+...++..|..-| + ++.++.. ...|+|++..--... +..+++.+..+- -+- T Consensus 401 iKF~KF-I~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGk 479 (524) T protein:vir:10 401 LKFAKW-IRQLQNKFEEIFLDPLKTNLILKKIITEDEWEREINNIKVTFNRDSYFSEMKDAEIMERRINMLTMAEPFIGK 479 (524) T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcc Confidence 123222 4555555555554433 2 2222221 123333332211111 122223222221 112 Q ss_pred CcCHHHHHHH-hCCCCCCCCCeEeeccCccccccccc--cccccCCcccCCCCccCCC Q lcl|Aclame:pro 362 VLNKDEIREL-LERNPIENGDKYISSLNYVFLDFLEE--YQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 362 ~~t~NE~R~~-~gl~p~~ggd~~~~~~n~~~~~~~~~--~~~~~~~~~~~gge~~~~~ 416 (416) .++.+=+|+. |.+.-. .+....+ .++.+.+--.+..+..++= T Consensus 480 y~s~~yi~k~ILr~tDe-------------ei~~~~k~I~~E~k~~~~~~~~~~~~~f 524 (524) T protein:vir:10 480 YISHQTAMKDFLQMTDE-------------EINQEAKQIEEESKEARFQNPDEEEEDF 524 (524) T ss_pred cchhHHHHHHHhccCHH-------------HHHHHHHHHHHHhhcCCCCCCChhhhcC Confidence 2344444442 222110 0000000 0001111001111111111 No 241 >protein:vir:103458 Length: 524 # NCBI annotation: portal vertex of the head # Family: family:all:1036 # MgeID: mge:1542 # MgeName: RB32 # Cross-refs: genbank:acc:YP_803110;genbank:gi:116326390;genbank:GeneID:4405487 Probab=66.35 E-value=0.27 Score=23.71 Aligned_cols=395 Identities=10% Similarity=0.077 Sum_probs=162.4 Q ss_pred Ccc--hhhhccccc---------------ccc-c--cc--------------cchhHHHhhhcCcccc--cccc-c-cHH Q lcl|Aclame:pro 1 MLL--ERMFEKRSG---------------SSD-H--ED--------------GFNNILLNMFGGRKTA--SGER-V-SES 42 (416) Q Consensus 1 m~~--~~~f~~~~~---------------~~~-~--~~--------------~~~~~~~~~~~~~~~~--~~~~-~-~~~ 42 (416) |-| .++|+.... +.. + .+ ++.....+++++.-.. +... + ..+ T Consensus 1 m~~~~L~~~~~w~~~de~~~~~~~~~~~~S~~~p~~~Dga~e~~~~~~~~a~~~~g~~~~~~g~~e~~~~~~~eLI~~YR 80 (524) T protein:vir:10 1 MKFNVLSLFAPWAKMDERNFKDQEKEDLVSITAPKLDDGAREFEVSSNEAASPYNAAFQTIFGSYEPGMKTTRELIDTYR 80 (524) T ss_pred CCCchhhHhhccccCcchhhhhhhccCCccccCccCCCCceeeeecccccccccceeeeehhcccccccchHHHHHHHHH Confidence 444 233432110 110 0 00 0111111111110000 0000 1 234 Q ss_pred HHhccHHHHHHHHHHHHhhccCcc-----eEEeecCC---cceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCC Q lcl|Aclame:pro 43 NSLVQPDIFACVNVLSDDIAKLPI-----HTYKRTDG---GIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGN 114 (416) Q Consensus 43 ~a~~~~~v~~~i~~ia~~ia~~~~-----~~~~~~~~---~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~ 114 (416) ..+.+|.|..||+.|.+.+.-..- .+--.+-+ ..+..+.....+.| . .++...--..++..|...|. T Consensus 81 ~ma~~pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il-~----ll~F~~~~~~~fR~WYVDgR 155 (524) T protein:vir:10 81 NLMNNYEVDNAVSEIVSDAIVYEDDTEVVALNLDKSKFSPKIKNMMLDEFNDVL-N----HLSFQRKGSDHFRRWYVDSR 155 (524) T ss_pred HHhhccchhhHHHHhhcceeEecCCCceEEEEecCcCcchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhheeeeE Confidence 567899999999999988754321 11110000 00000000111111 1 12223333445667788899 Q ss_pred eEEEEeecCC---CcEEEEEeeccceEEEEEc----CCCc-------EEEEEEee-------------CCeeEEechhhe Q lcl|Aclame:pro 115 AYSYIQFGSH---GYPEALFPLRPDYTNAYVH----PTTG-------MLWYQTVL-------------NGKAIELYDYEV 167 (416) Q Consensus 115 ~~~~i~r~~~---g~~~~l~~l~p~~v~~~~~----~~~~-------~~~~~~~~-------------~~~~~~~~~~~v 167 (416) .|..++-+.. .-+.+|..|+|..++.... ..++ .-+|.|.. .+..+.++.+-| T Consensus 156 i~fhKiid~k~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~y~~~g~~~~~~~~ikI~~dAI 235 (524) T protein:vir:10 156 IFFHKIIDPKRPKEGIKELRRLDPRQVQYVREIITETEAGTKIVKGYKEYFIYDTAHESYACDGRMYEAGTKIKIPKAAI 235 (524) T ss_pred EEEEEEeeCCCccccceeeeeeCCccceeeeeeccCCCccchhhcchhhheeeccCccccccCccccCCCcceecchhhe Confidence 9988865422 2378999999999876322 1111 11223321 123455666665 Q ss_pred eeecc--CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc----- Q lcl|Aclame:pro 168 LHFKG--LSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK----- 238 (416) Q Consensus 168 ih~~~--~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~----- 238 (416) .+... .+.++-.-+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| T Consensus 236 ~y~hSGL~d~~~~~i~gyLhkAiKp~NQLkmlEDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~KNklvYD 315 (524) T protein:vir:10 236 VYAHSGLVDCCGKNIIGYLHRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAAEHMQHVMNTMKNRVVYD 315 (524) T ss_pred eeeeccceeCCCCceeccchhhhHHHHhhhHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEe Confidence 55441 1223334577888888888888777777664444444334444443 333 33344444444443322 Q ss_pred --CCce--------------eec---CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCC--C--cc- Q lcl|Aclame:pro 239 --VENI--------------AII---DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKA--T--FS- 294 (416) Q Consensus 239 --~~~~--------------~vl---~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~--~--~s- 294 (416) .|.+ +.- ..|.+++.|.. ...+.-++-.++..+.+.++++||.+-|.....+ + .+ T Consensus 316 a~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpG-gqnlgem~DV~YF~kkLy~aLnVP~sRl~~d~~~~f~~gr~~ 394 (524) T protein:vir:10 316 ASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTLPG-ADNTGNMEDVRWFRQALYMALRVPLSRIPQDQQGGVMFDSGT 394 (524) T ss_pred CCCCeeccchhhhhhHhhhcccccCCCcccceeeccc-cCCcChHHHHHHHHHHHHHHhCCchhhcCCCCCccccccccc Confidence 1211 111 13455555543 2223334455678899999999999999432111 1 11 Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhh----c-----Cchhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHH Q lcl|Aclame:pro 295 NIEHQSIEYVRNTLQPWIVNFEQELNVKL----F-----LDHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTL 357 (416) Q Consensus 295 ~~e~~~~~f~~~~l~P~~~~i~~~l~~~l----~-----~~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~ 357 (416) ...-.-..|..+ |.-+...++..|..-| + ++.++.. ...|+|++..--... +..+++.+..+ T Consensus 395 EItRDEikF~KF-I~rLR~rFs~~f~~~Lk~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~ 473 (524) T protein:vir:10 395 SITRDELTFAKF-IRELQHKFEEVFLDPLKTNLLLKGIITEDEWNDEINNIKIEFHRDSYFTELKEAEILERRINMLTMA 473 (524) T ss_pred hhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHh Confidence 111111123222 5555555555554433 2 2222221 123333332211111 12222222222 Q ss_pred H--hCCCcCHHHHHHH-hCCCCCCCCCeEeeccCccccccccc--cccccCCcccCCCCccCCC Q lcl|Aclame:pro 358 H--ETGVLNKDEIREL-LERNPIENGDKYISSLNYVFLDFLEE--YQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 358 ~--~~g~~t~NE~R~~-~gl~p~~ggd~~~~~~n~~~~~~~~~--~~~~~~~~~~~gge~~~~~ 416 (416) - -+-.++.+=+|+. |.+.-. .+..... .++.+.+--. ..+.+.+- T Consensus 474 dpyvGky~s~~yi~k~ILr~tDe-------------ei~~~~k~I~~E~k~~~~~-~~~~~~~~ 523 (524) T protein:vir:10 474 EPFIGKYISHRTAMKDILQMTDE-------------EIEQEAKQIEEESKEARFQ-DPDQEQED 523 (524) T ss_pred hhhhcccchhHHHHHHHhccCHH-------------HHHHHHHHHHHHhhcCCCC-CCchhhhc Confidence 1 1122344444432 222110 0000000 0001110000 01111111 No 242 >protein:vir:80165 Length: 651 # NCBI annotation: portal protein # Family: family:all:1548 # MgeID: mge:1878 # MgeName: Pf-WMP3 # Cross-refs: genbank:acc:YP_001285799;genbank:gi:148747833;genbank:GeneID:5220441 Probab=64.36 E-value=0.3 Score=23.44 Aligned_cols=401 Identities=8% Similarity=-0.045 Sum_probs=162.3 Q ss_pred Ccchhhhccccccccccccch---------hHHHhhhcCcccc--ccccccHHHHhccHHHHHHHHHHHHhhccC----- Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFN---------NILLNMFGGRKTA--SGERVSESNSLVQPDIFACVNVLSDDIAKL----- 64 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~---------~~~~~~~~~~~~~--~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~----- 64 (416) -++.++-+.++........|. ....++..+.... .......+...-.+.|+.||+.+...+..+ T Consensus 24 ~~~~~~~~~~~~r~~~~~~w~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~rs~~~~~~v~~~ve~~~~~l~~~~~~~~ 103 (651) T protein:vir:80 24 YVKKEYKRFCDARQVCEETWLEAWGMYLSTPEAQDYLRDQVLRSVGDVNADWRHKITTGKAFEAIETIHAYLMSATFPNK 103 (651) T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHhhcccHHHHHhhccccccccCCCCCCCCccccChhHHHHHHHHHHHHHHhhcCCC Confidence 122222222221111111110 0112222111111 111111223345677888888666666553 Q ss_pred c-ceEEeecCCcceeeeccchhh-hhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCC------------------ Q lcl|Aclame:pro 65 P-IHTYKRTDGGIERKPEHKSAH-AVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSH------------------ 124 (416) Q Consensus 65 ~-~~~~~~~~~~~~~~~~~~~~~-~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~------------------ 124 (416) + |++....+....+ ....+.. ++...- ...........++.+.+..|+|++.+.++.. T Consensus 104 ~~~~~~p~~~~d~a~-~~~~~~~~~~~~~l-~~~~~~~~~~~~~~d~l~~G~~i~kv~we~~~~~~~~~~~~~~~~~~~~ 181 (651) T protein:vir:80 104 NWFDVVPAKPGQDNL-LVSRLIKRYVQDKL-TEGKFRAAYANFLRQLLITGNSVLALPWRVETAEVKKKVQVRTPLFEDE 181 (651) T ss_pred ceeEeccCCchhHHH-HHHHHHHHHHHHHh-hccCcHHHHHHHHHhhcccCceEEEEeecceeeeeehheeccccccccc Confidence 2 2222211111000 0001111 221111 1123556777888999999999886654311 Q ss_pred -------------CcEEEEEeeccceEEEEEcC----CC----------------------------------------- Q lcl|Aclame:pro 125 -------------GYPEALFPLRPDYTNAYVHP----TT----------------------------------------- 146 (416) Q Consensus 125 -------------g~~~~l~~l~p~~v~~~~~~----~~----------------------------------------- 146 (416) |.| .+..++|..+-+-... +. T Consensus 182 ~~~~v~~~~~~~~~~~-~i~~v~p~~~~~dp~a~~~~d~~~v~~~~~t~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 260 (651) T protein:vir:80 182 PTFEVVSEEREVKSSP-DFEVLDMFDCFYDPNVTDPNRGAFIRKLTKTKADILNLLSEGYYYGVDPLDVVEHKCKDTSDT 260 (651) T ss_pred cceeeeccceeeecee-EEEEecHHHeeecCCCcCccccceeeeeeeeHHHHHHHHhcccccchhhHHHHhhhccccccC Confidence 111 1222222111110000 00 Q ss_pred --------------------cEEEE----EEeeCCe-e----EEechh--------------heeeeccCC-CCcccccc Q lcl|Aclame:pro 147 --------------------GMLWY----QTVLNGK-A----IELYDY--------------EVLHFKGLS-TDGIHGKS 182 (416) Q Consensus 147 --------------------~~~~~----~~~~~~~-~----~~~~~~--------------~vih~~~~~-~~~~~G~s 182 (416) .+..| .+...+. . +..... ..++++... +...||.| T Consensus 261 ~~~~~~~~~~~d~~~~~~~~~v~v~E~~~~~d~e~~~~~~~~v~~~g~~il~~~~~~~~~~~Pf~~~~~~~~~~~~yG~g 340 (651) T protein:vir:80 261 KQDMLSTFQGVTTSLWSPHQNVELLEYWGDIHLENKTYHDVVVTIMGNEVLRFEQNPYWCGRPFVIGTYIPTARQPYAMG 340 (651) T ss_pred CccccccccCCCccccccccceEEEEEEEEeeccCCceEEEEEEEcCcEEecccccCCCCCCCeeeecceecCccccCCC Confidence 00000 0111110 0 011111 233333322 23479999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhH- Q lcl|Aclame:pro 183 PIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEA- 261 (416) Q Consensus 183 ~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~- 261 (416) +.+.+.........+.+.......-.+.|.+.+..++..+++... ...|++++.....++.++...+.+. T Consensus 341 ~~~~~~~~q~~ln~l~~~~ld~~~~~~~~~~~v~~d~~~~~~~l~---------~~pg~vi~~~~~~~~~~l~~~~~~~~ 411 (651) T protein:vir:80 341 ALQPNLGMLHELNIITNQRLDNLELAIDQMYTLRSDGLLQPEDVY---------TEPGKVFLVSDHGDLQPLANQSSNFS 411 (651) T ss_pred hHHHHhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCccccHHHhh---------cCCCceEEecCCCCceeeccCcccch Confidence 999999999999999998888888888888888877766655431 2346677776666666665433232 Q ss_pred HHHHHHHHHHHHHHHHhccchhhcccccCCC-cccHH--HHHHHHHHHHHHHHHHHHHHHHHHhhcCch-------h--- Q lcl|Aclame:pro 262 QFVESMKFNKAQISMIYKVPLHKLNELDKAT-FSNIE--HQSIEYVRNTLQPWIVNFEQELNVKLFLDH-------D--- 328 (416) Q Consensus 262 ~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~-~s~~e--~~~~~f~~~~l~P~~~~i~~~l~~~l~~~~-------~--- 328 (416) ............+-..+||+...-|....+. .-++. .+...-....+.++++.+.+++-.-|+... . T Consensus 412 ~~~~~l~~l~~~~~~~~gv~~~~~g~~~~~~~~~TAteI~~~~~~~~~~l~~v~~~l~~e~l~pl~~r~l~l~~~~~~~~ 491 (651) T protein:vir:80 412 ITYQESSFLESTIDKNFGTGNYVGANAARSGERVTAAEVAAVREAGGNRLSGIHKHIEETSLLVLLEKVMHLVQQFTDQP 491 (651) T ss_pred hHHHHHHHHHHHHHHHhcCChHHhCCCccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc Confidence 2335566777778889999988877544321 11222 233345556667777777665432221000 0 Q ss_pred -------cc-----------cccchhhhhhhhhhcc---HHHHHHHHHHHHhCCCcCH------------HHHHHHhCCC Q lcl|Aclame:pro 329 -------QK-----------SGHYVKFNIDSELRGD---SKTQAEYLKTLHETGVLNK------------DEIRELLERN 375 (416) Q Consensus 329 -------~~-----------~~~~~~f~~~~l~~~d---~~~~~~~~~~~~~~g~~t~------------NE~R~~~gl~ 375 (416) .. .+....+++..+-... .......+..+++.+...+ -++.+..|++ T Consensus 492 ~~~ri~~~~~~~~~~~~i~~~dl~~~~~iv~~g~~~~~~r~~~~~~l~~~~q~~~~~p~~~~~~~~~~~~~~l~~~~g~~ 571 (651) T protein:vir:80 492 GMVRVAGDEAGAYEYYELDVEDLQKEVRLVPIGSDHVIERKQYIEDRLTFIQAVAQVPEMGQLVDYKRILVDLLQHWGFE 571 (651) T ss_pred cceeecccccccccccccCccceeeeeeeeeccHHHHHHHHHHHHHHHHHHHhhccCCccchhhhHHHHHHHHHHHcCCC Confidence 00 0011111111110001 1112222222232221111 1222334443 Q ss_pred CCCCCCeEeeccCcccccccccc---ccccCCcccC--CCCccCCC Q lcl|Aclame:pro 376 PIENGDKYISSLNYVFLDFLEEY---QRLKAGGAMK--GGDNKNEG 416 (416) Q Consensus 376 p~~ggd~~~~~~n~~~~~~~~~~---~~~~~~~~~~--gge~~~~~ 416 (416) ..+.++.+....+...+... +....+.... -...+.+. T Consensus 572 ---~~~~~l~~~~q~~~~~~~~~~~~q~~~~~~~a~~~~~~~~~~~ 614 (651) T protein:vir:80 572 ---EPEAYLKQQDQQAPANPQEALLSQAKDVGGQAMSNMLQNQLQA 614 (651) T ss_pred ---CcHHhcCCCccchhhhhhHHHHhhHHHHHHHHHHHHHHHHHHH Confidence 33444433221111100000 0000000000 00000000 No 243 >protein:vir:103177 Length: 533 # NCBI annotation: gp131 # Family: family:all:1036 # MgeID: mge:1583 # MgeName: Syn9 # Cross-refs: genbank:acc:YP_717798;genbank:gi:113200635;genbank:GeneID:4239186 Probab=63.84 E-value=0.31 Score=23.37 Aligned_cols=407 Identities=10% Similarity=0.075 Sum_probs=167.1 Q ss_pred chhhhc-----ccccccccc-------ccchhHHHhhhcCcccc-cccc------c-cHHHHhccHHHHHHHHHHHHhhc Q lcl|Aclame:pro 3 LERMFE-----KRSGSSDHE-------DGFNNILLNMFGGRKTA-SGER------V-SESNSLVQPDIFACVNVLSDDIA 62 (416) Q Consensus 3 ~~~~f~-----~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~------~-~~~~a~~~~~v~~~i~~ia~~ia 62 (416) .+.+|+ ++...+.+. .+......+.+.+.... .+.. + ..+..+.+|.|..||+.|.+.+. T Consensus 1 m~~lfg~~i~~~~~~~~~~s~~~~~~~dg~~~i~~~~~~~~~~~~e~~~~~~~eLI~~YR~ma~~pEvd~Av~eIVneai 80 (533) T protein:vir:10 1 MSQLFGFSLERAKKAPKGPSFVQKDNLDGSQPVSGGGYYGYTVDFDGQVRNEYQLISRYREMVLQPECDSAVDDIVNETI 80 (533) T ss_pred CccccccccccccccccCCCCCCCCcccccceeecccccceeeecccccchHHHHHHHHHHHhhccchhhHHHHhhccee Confidence 223333 111111111 11111111111111100 0000 1 13556679999999999998876 Q ss_pred cCcceE-----EeecC---CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec---CCCcEEEEE Q lcl|Aclame:pro 63 KLPIHT-----YKRTD---GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG---SHGYPEALF 131 (416) Q Consensus 63 ~~~~~~-----~~~~~---~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~---~~g~~~~l~ 131 (416) -..-.. --.+- +..+..+.....+.| . .++...--+.++..|...|..|..++-+ ...-+.+|. T Consensus 81 v~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il-~----ll~F~~~~~e~fR~WYVDgRi~fHkiid~~~pk~GI~ELr 155 (533) T protein:vir:10 81 CGNFDDVPVSVELSNLKVSDKIKKLIREEFGEIL-R----LLDFENRSYEIFRRWYVDGRLFYHKVIDPDNPQGGLIELR 155 (533) T ss_pred eecCCCceEEEEecccccchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhhhhcceEEEEEEecCCCccccceeee Confidence 433221 11000 000000000111111 1 1222333344566777889999887654 223488999 Q ss_pred eeccceEEEEEcC-----CC-------------cEEEEEEeeC------CeeEEechhheeeecc--CCCCccccccHHH Q lcl|Aclame:pro 132 PLRPDYTNAYVHP-----TT-------------GMLWYQTVLN------GKAIELYDYEVLHFKG--LSTDGIHGKSPIG 185 (416) Q Consensus 132 ~l~p~~v~~~~~~-----~~-------------~~~~~~~~~~------~~~~~~~~~~vih~~~--~~~~~~~G~s~~~ 185 (416) .|+|..++..... ++ ..-||.|... ++.++++.+-|..... ...++-.-+|-+. T Consensus 156 ~lDPr~i~~vr~i~~~~~~~~~~~~~~~~v~~~~~eyf~Ynp~g~~~~~~~~vkI~~dAI~y~hSGl~d~~~~~i~syLh 235 (533) T protein:vir:10 156 YIDPRKIRKINETEQKRPEQLRGLPLNQQLSPKSAEYFLYDPKGLKNSTTQGLKIAPDSICYVHSGIMDLNKNMTLSHLH 235 (533) T ss_pred eccccceeeeeeeeccCCCccceeecchhhhccceeeeeeccccccccCCCceecchhheeeeeccceeCCCCceeccch Confidence 9999988874321 11 1123333322 3456677754443331 1222334568888 Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CCce-------------- Q lcl|Aclame:pro 186 VVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VENI-------------- 242 (416) Q Consensus 186 ~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~~~-------------- 242 (416) .+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .|.+ T Consensus 236 kAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddrk~msMlEDyW 315 (533) T protein:vir:10 236 KAIKAVNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKNKAEQYLREVMGRYRNKLVYDANTGEIKDDKKFMSMLEDFW 315 (533) T ss_pred HhHHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccchhhhhHhhhc Confidence 888888888877777664444444334444443 333 33333444444443321 1211 Q ss_pred eec---CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHH---HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 243 AII---DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEH---QSIEYVRNTLQPWIVNFE 316 (416) Q Consensus 243 ~vl---~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~---~~~~f~~~~l~P~~~~i~ 316 (416) +.- ..|.+++.|.. .+.+.-++-.++..+.+.++++||.+-|.....-+.....+ .-..|..+ |.-+...++ T Consensus 316 LPRReGgrgTEItTLpG-gqnLgem~DV~YF~kKLY~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~KF-I~RLR~rFs 393 (533) T protein:vir:10 316 LPRREGGRGTEITTLPG-GQNLGELEDVKYFQKKLYKSLNVPGSRLETETTFNVGRAAEITRDEVKFQKF-VARLRKRFS 393 (533) T ss_pred ccccCCCCccceeeccc-cCCcChHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHHHH-HHHHHHHHH Confidence 111 13455555543 22233345556788999999999999996433222221111 11123222 555555555 Q ss_pred HHHHHhh----c-----Cchhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHH--HhCCCcCHHHHHHH-hCCCC Q lcl|Aclame:pro 317 QELNVKL----F-----LDHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTL--HETGVLNKDEIREL-LERNP 376 (416) Q Consensus 317 ~~l~~~l----~-----~~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~--~~~g~~t~NE~R~~-~gl~p 376 (416) ..|..-| + ++.++.. ...|+|++..--... +..+++.+..+ +-+-.++.+=+|+. |.+.- T Consensus 394 ~lF~~~Lk~qLiLKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~dyi~k~ILr~tD 473 (533) T protein:vir:10 394 ELFTDLLKTQLVLKGVISIEEWDQMKEHIQYDYIADNYFAELKEIEIRNERMNQVATMDPFVGKYFSVEYMRRQVLKQTD 473 (533) T ss_pred HHHHHHHHHhhhhccCCCHHHHHHHhhcceEeeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccchHHHHHHHhccCH Confidence 5554433 2 2223221 223333332211111 12333333332 11222344444432 23221 Q ss_pred CC----------C-CCeEeecc--Cccccccccccccc---cCCcccCCCCccCCC Q lcl|Aclame:pro 377 IE----------N-GDKYISSL--NYVFLDFLEEYQRL---KAGGAMKGGDNKNEG 416 (416) Q Consensus 377 ~~----------g-gd~~~~~~--n~~~~~~~~~~~~~---~~~~~~~gge~~~~~ 416 (416) .+ . .+-++.+- .+.|...+..++.. ...-+.++.+.+.|. T Consensus 474 eei~~~~kqI~~E~k~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (533) T protein:vir:10 474 VEMKEIDKQIESEMESGIIADPAAEMDPAMAAGDPDAGGAPAEEVAPEGPDPSDER 529 (533) T ss_pred HHHHHHHHHHHHHHhCCCCCCCcchhhHHhcCCCCCcCCcccccCCCCCCCcchhh Confidence 10 0 01111100 00000000000000 000011222222222 No 244 >protein:vir:96783 Length: 488 # NCBI annotation: putative structural protein # Family: family:all:584 # MgeID: mge:1629 # MgeName: phiHSIC # Cross-refs: genbank:acc:YP_224240;genbank:gi:62362375;genbank:GeneID:3345722 Probab=62.77 E-value=0.33 Score=23.23 Aligned_cols=374 Identities=7% Similarity=-0.079 Sum_probs=149.6 Q ss_pred Ccchhhhccccccccccc-------cchhHHHh---hhcCcccc---c----------ccccc--H-----HHHhccHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHED-------GFNNILLN---MFGGRKTA---S----------GERVS--E-----SNSLVQPDI 50 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~-------~~~~~~~~---~~~~~~~~---~----------~~~~~--~-----~~a~~~~~v 50 (416) |..+ -++........ .....+.. .+-+.+.. . ...++ . +.|.-.+++ T Consensus 14 m~V~---~~hp~y~a~~~~W~~~~d~g~~~~k~~g~~YLPk~~~~~~~~~~d~~y~~~~~~~~~~y~~~~~~rA~~~n~~ 90 (488) T protein:vir:96 14 MLTP---IYHPDYLVNAPQWLRNLDCVMDNIKRKKQTYLPNLGAIPPEAKTDPKVTALAAKIEKDWEDLTWRLANYVNIV 90 (488) T ss_pred eccc---ccCHHHHHHhhhhhHhhhhhhHHHHHhhhhcCCCCCCccccccCcchhhhhhccchhhhHhhhhhccccCchh Confidence 2211 00000000000 00000100 00000000 0 00000 0 123334566 Q ss_pred HHHHHHHHHhhccCcceEEeecCCcceeeeccchhhhhcc-ccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCc--- Q lcl|Aclame:pro 51 FACVNVLSDDIAKLPIHTYKRTDGGIERKPEHKSAHAVYA-RPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGY--- 126 (416) Q Consensus 51 ~~~i~~ia~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~--- 126 (416) ..+++.++..+.+-|..+-.. +.+....|.. ---..-+-.+|.+.++...+.+|.+++++..+..+. T Consensus 91 ~~tl~~l~G~vfrk~p~~~~~---------~~~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~T~a 161 (488) T protein:vir:96 91 NPTMNAITGAVMRREPEFDTM---------DNPVLIGLRDNIDGKGNGIDQECKQALNALQWGSRCGWLVRSHPESATMA 161 (488) T ss_pred HHHHHHhcchhhccCceeccC---------CcHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEecCCCcCCHH Confidence 667777766666666654211 1122233333 233556789999999999999999999998764321 Q ss_pred --------EEEEEeeccceE----------------------EEEEcCCC---c--EEEEEEeeC----------CeeE- Q lcl|Aclame:pro 127 --------PEALFPLRPDYT----------------------NAYVHPTT---G--MLWYQTVLN----------GKAI- 160 (416) Q Consensus 127 --------~~~l~~l~p~~v----------------------~~~~~~~~---~--~~~~~~~~~----------~~~~- 160 (416) | .+..+.|..| ....+..+ . ..++....+ .... T Consensus 162 de~~~~~rP-y~~~~~a~~IinW~~~~v~G~~~L~~v~lrE~~~~~D~~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~e 240 (488) T protein:vir:96 162 DWNKGKKLP-TAAFYDALHIIDWEVEYIDGEEKLTYLSLLEDYQERDGGTYVSKQRLINHRLVDGLCEFQEVTDDEYSDE 240 (488) T ss_pred HHHHhcCCc-EEEEechhhhcCcceeccCCceeeEEEEEEEEEEeccCCCcccceEEEEEEEECcEEEEEEEecCCcccc Confidence 1 1221111111 11111111 0 111111110 0000 Q ss_pred Eechh---------heeeeccCCCCccccccHHHHH-HHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHH Q lcl|Aclame:pro 161 ELYDY---------EVLHFKGLSTDGIHGKSPIGVV-REHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVR 230 (416) Q Consensus 161 ~~~~~---------~vih~~~~~~~~~~G~s~~~~~-~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~ 230 (416) .++.+ .++++-....+...|.+|+..+ .-.+........+... +...+.|.+++...+ .+++..+... T Consensus 241 ~~~~~~g~~~l~~IP~v~~~~~~~~~~~~~pPLldLA~lnl~Hy~~ssd~~~i-l~~~~~p~lv~~~~~-~~~~~~~~~~ 318 (488) T protein:vir:96 241 WTPVLINSKQSDTIPFFLASSQSNEWCIDSTPLTSLAEISLSIYVMNAYSNKA-MILANEAKWMVDMGD-MNKTMASEMN 318 (488) T ss_pred eEeecCCCcccCeeEEEEEecCCCCCCCCCCchHHHHHHHHHHHhhhhHHHHH-HHhcCCceeeeccCC-CCcccccccc Confidence 00100 1222211122234577766554 4556666666666544 445556766664433 3333332221 Q ss_pred HHHHHhhcCCc-eeecCCC-ceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHH Q lcl|Aclame:pro 231 KEWKRVNKVEN-IAIIDYG-LEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTL 308 (416) Q Consensus 231 ~~~~~~~~~~~-~~vl~~g-~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l 308 (416) . .+..-+.. +...+.| ++|.+.+ ++.+ ..+.++...+++.. .| ..++.- ..+..+.........-+..| T Consensus 319 ~--~g~~~~~~~~~~~~~g~~~~~e~~--~~~l-~~~~l~~l~~qm~~-~G--a~l~~~-~~~~Ta~~~~~~~~~~~S~L 389 (488) T protein:vir:96 319 P--LGFTLAGRMPYYVKNGDVKVIQAQ--FSPE-TENKVEKLFEQAVK-VG--ASLFTQ-QSNETATGAAIRSGSSTASM 389 (488) T ss_pred c--ceeeecccccccccCCceeecCCc--hhHH-HHHHHHHHHHHHHH-Hh--HhhccC-CCcchHHHHHHHHHHhhHHH Confidence 1 01111111 2223333 4455443 3322 12223333333211 22 223321 11111222233344557778 Q ss_pred HHHHHHHHHHHHHhhcCchhcc-------cccchhhhhhh--hhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Q lcl|Aclame:pro 309 QPWIVNFEQELNVKLFLDHDQK-------SGHYVKFNIDS--ELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIEN 379 (416) Q Consensus 309 ~P~~~~i~~~l~~~l~~~~~~~-------~~~~~~f~~~~--l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~g 379 (416) .-++.++++.+++.|---..+- ......|+++. ....-.....+++.+++.+|.++..+.++.+-.--+=. T Consensus 390 ~~~a~~le~al~~~l~~~A~w~g~~~~~~~~~~~~~~in~dF~~~~ld~~~~~al~~~~~~G~Is~~t~~~~L~~~gvl~ 469 (488) T protein:vir:96 390 ATLGNNVEDTVRNMLRFIMRYFEGTNLYVNPDELVFKLNRDYFDVEVNPQMLQVAYAAMMEGNLPQVSWFELLKRARVVR 469 (488) T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCcCccceEEEeccCCCCccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCcCC Confidence 8888999999887653211110 11123333332 22223344667888899999999999988764322100 Q ss_pred CCeEeeccCccccccccccccccCCccc Q lcl|Aclame:pro 380 GDKYISSLNYVFLDFLEEYQRLKAGGAM 407 (416) Q Consensus 380 gd~~~~~~n~~~~~~~~~~~~~~~~~~~ 407 (416) -+....+..+..+ .+|-.. T Consensus 470 -------~d~~~e~~~~~ie--~~g~~~ 488 (488) T protein:vir:96 470 -------GDMSKEEFDEHIA--ELGFGM 488 (488) T ss_pred -------ccCCHHHHHHHHh--hcCCCC Confidence 0000000000000 011111 No 245 >protein:vir:6896 Length: 523 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:140 # MgeName: RB69 # Cross-refs: genbank:acc:NP_861872;genbank:gi:32453663;genbank:GeneID:1494298 Probab=60.96 E-value=0.36 Score=23.00 Aligned_cols=395 Identities=9% Similarity=0.053 Sum_probs=162.0 Q ss_pred Cc--chhhhcc-----------ccccccc---cccchhHHHhhhcCccc--------cccc-----c----c-cHHHHhc Q lcl|Aclame:pro 1 ML--LERMFEK-----------RSGSSDH---EDGFNNILLNMFGGRKT--------ASGE-----R----V-SESNSLV 46 (416) Q Consensus 1 m~--~~~~f~~-----------~~~~~~~---~~~~~~~~~~~~~~~~~--------~~~~-----~----~-~~~~a~~ 46 (416) |. |..|.+. +..+..+ .++....-.+...+..+ ..+. . + ..+..+. T Consensus 5 ~~~lf~f~~~~de~~~~~~~~~~~~S~~~p~~dDGa~~i~~~~~~~~~~~~~~~q~~y~~~e~~~~~~~eLI~~YR~ma~ 84 (523) T protein:vir:68 5 ILSLFAPWAKMDERDYKDQEKENLESITSPKLDDGAKEYEVSENEAQQTYNAMFQRMFGSQEPGLKSTRELIDTYRNLMT 84 (523) T ss_pred hhhhhhhhhhhhhhhhhhhhhccCCCccccCCCCcceeeeccccccccccchhhhhhhhccccccchHHHHHHHHHHHhh Confidence 22 2222221 1111111 11110011111111100 0000 0 1 2345678 Q ss_pred cHHHHHHHHHHHHhhccCcce-----EEeecC---CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEE Q lcl|Aclame:pro 47 QPDIFACVNVLSDDIAKLPIH-----TYKRTD---GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSY 118 (416) Q Consensus 47 ~~~v~~~i~~ia~~ia~~~~~-----~~~~~~---~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~ 118 (416) +|.|..||+.|.+.+.-..-. +--.+- ++.+..+.....+.| . .++...--..++..|...|..|.. T Consensus 85 ~pEvd~Av~eIVneaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eeF~~Il-~----ll~F~~~~~~~fR~WYVDgRi~fh 159 (523) T protein:vir:68 85 NYEVDNAVSEIVSDAIVYEDDTEVVSINLDNTKFSPNIKSMMLDEFNEVL-N----HLSFQRKGSDHFRRWYVDSRIFFH 159 (523) T ss_pred ccchhhHHHHhhcceeeecCCCceEEEEecccccchHHHHHHHHHHHHHH-H----HhccchhhhHHHHhheeeeEEEEE Confidence 999999999999887643311 111000 000000000111111 1 122333334456677888999988 Q ss_pred EeecCC---CcEEEEEeeccceEEEEEc----CCCc-------EEEEEEee-------------CCeeEEechhheeeec Q lcl|Aclame:pro 119 IQFGSH---GYPEALFPLRPDYTNAYVH----PTTG-------MLWYQTVL-------------NGKAIELYDYEVLHFK 171 (416) Q Consensus 119 i~r~~~---g~~~~l~~l~p~~v~~~~~----~~~~-------~~~~~~~~-------------~~~~~~~~~~~vih~~ 171 (416) ++-+.. .-+.+|..|+|..++.... ..++ .-+|.|.. .++.+.++.+-|.+.. T Consensus 160 Kiid~k~pk~GI~Elr~lDPr~i~~vr~i~~~~~~g~~vi~~~~e~f~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~h 239 (523) T protein:vir:68 160 KIIDPKRPKEGIKELRRLDPRQVQYVREVITTTEAGVKIVKGYKEYFIYDTSHESYACDGRIYEAGTKIKIPKAAIVYAH 239 (523) T ss_pred EEeeCCCccccceeeeeeCCcceeEEEeecCCCCcchhhhhhhhhheeeccccccccccccccCCCcceecchhheeeee Confidence 865422 2378999999998876322 1111 11222221 1234566666655544 Q ss_pred c--CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CC Q lcl|Aclame:pro 172 G--LSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VE 240 (416) Q Consensus 172 ~--~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~ 240 (416) . .+.++-.-+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .| T Consensus 240 SGL~d~~~~~i~gyLhkAiKp~NQLkmlEDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNKlvYDa~TG 319 (523) T protein:vir:68 240 SGLVDCCGKNIIGYLHRAIKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPSRKAAEHMQHVMNTMKNRIAYDATTG 319 (523) T ss_pred ccceeCCCCceeccchhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhhcceeEEeccCC Confidence 2 1223334578888888888888877777664444444334444443 333 33333444444443322 12 Q ss_pred ce--------------eec---CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCC-C--ccc-HHHH Q lcl|Aclame:pro 241 NI--------------AII---DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKA-T--FSN-IEHQ 299 (416) Q Consensus 241 ~~--------------~vl---~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~-~--~s~-~e~~ 299 (416) .+ +.- ..|.+++.|.. ...+.-++-.++..+.+.++++||.+-|....++ + .++ ..-. T Consensus 320 ev~ddrk~msMlEDyWLpRReGgrgTEItTLpG-gqnlgem~DV~YF~kkLy~aLnVP~sRl~~~~~~f~~Gr~~EItRD 398 (523) T protein:vir:68 320 KIKNQQHIMSMTEDYWLQRRDGKAVTEVDTLPG-ADNTGNMEDVRWFRNALYMALRIPITRIPSDQGGIQFDAGTSITRD 398 (523) T ss_pred eeccchhhhhhHhhhcccccCCCcccceeeccc-cCCcChHHHHHHHHHHHHHHhCCcceeecCCCcceecccccchhHH Confidence 11 111 13455555543 2223334455678899999999999999533221 2 111 1111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh----c-----Cchhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHHH--hC Q lcl|Aclame:pro 300 SIEYVRNTLQPWIVNFEQELNVKL----F-----LDHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTLH--ET 360 (416) Q Consensus 300 ~~~f~~~~l~P~~~~i~~~l~~~l----~-----~~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~~--~~ 360 (416) -..|..+ |.-+...++..|..-| + ++.++.. ...|+|++..--... +..+++.+..+- -+ T Consensus 399 EikF~KF-I~rLR~rFs~lf~~~Lk~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvG 477 (523) T protein:vir:68 399 ELSFGKF-IRELQHKFEEIFLDPLKTNLILKGIITEDEWNDEINNIKIKFHRDSYFSELKDAEILERRINMLQMAEPFIG 477 (523) T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEeeeecchHHHHHHHHHHHHHHHHHHHhhhhhc Confidence 1123222 5555555555554433 2 2222221 123333332211111 122222222221 11 Q ss_pred CCcCHHHHHHH-hCCCCCCCCCeEeeccCccccccccc--cccccCCcccCCCCccCCC Q lcl|Aclame:pro 361 GVLNKDEIREL-LERNPIENGDKYISSLNYVFLDFLEE--YQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 361 g~~t~NE~R~~-~gl~p~~ggd~~~~~~n~~~~~~~~~--~~~~~~~~~~~gge~~~~~ 416 (416) -.++.+=+|+. |.+.-. .+..... .++.+.+--. ..+.+.+- T Consensus 478 ky~s~~yi~k~ILr~tDe-------------ei~~~~kqI~~E~k~~~~~-~p~~e~~~ 522 (523) T protein:vir:68 478 KYISHRTAMKDILQMSDE-------------EIEQEAKQIEEESKEARFQ-DPDQEQED 522 (523) T ss_pred ccchhHHHHHHHhccCHH-------------HHHHHHHHHHHHhhcCCCC-CCchhhhc Confidence 22344444442 222110 0000000 0001111000 01111111 No 246 >protein:vir:81017 Length: 521 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1888 # MgeName: Phi1 # Cross-refs: genbank:acc:YP_001469501;genbank:gi:157311458;genbank:GeneID:5602316 Probab=59.65 E-value=0.39 Score=22.84 Aligned_cols=396 Identities=9% Similarity=0.035 Sum_probs=163.6 Q ss_pred Ccchhhhccc-----------cccccccccchhH-HH-------hhhcCcccccccc-----------c-cHHHHhccHH Q lcl|Aclame:pro 1 MLLERMFEKR-----------SGSSDHEDGFNNI-LL-------NMFGGRKTASGER-----------V-SESNSLVQPD 49 (416) Q Consensus 1 m~~~~~f~~~-----------~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~-----------~-~~~~a~~~~~ 49 (416) =+++.||+-. ..+-.+....+.. .. .+..++....... + ..+..+.+|. T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~s~~~P~~~dGa~~i~~~~~~~~~~~gg~~~~~~~~e~~~~~~~eLI~~YR~ma~~pE 85 (521) T protein:vir:81 6 KMLARWADFDNDKYEEQIKDKAESIAAPKNNDGATEVEINDNLPASAWNSLTQQFYSTDQKISTTKQLVNTYRGLMNNHE 85 (521) T ss_pred hhhHhhcCchhhhHHhhhccCccccccCCCCCCceEecccCCCcceeecceeeeecccccchhhHHHHHHHHHHHhhccc Confidence 2345555411 1111111110000 00 0000000000000 1 1245567999 Q ss_pred HHHHHHHHHHhhccCcc-----eEEeecC---CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEee Q lcl|Aclame:pro 50 IFACVNVLSDDIAKLPI-----HTYKRTD---GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQF 121 (416) Q Consensus 50 v~~~i~~ia~~ia~~~~-----~~~~~~~---~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r 121 (416) |..||+.|.+.+.-..- .+--.+- ++.+..+.....+.+ . .++...--..++..|...|..|..++. T Consensus 86 vd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il-~----ll~F~~~~~~~fR~WYVDgRi~fhkii 160 (521) T protein:vir:81 86 VENAVQNIVNDAIVFEEGHEVVSLNLEATGFSESVKERIHEEFKDLL-N----TIQFDRRGQDMFRRWYVDSRIFFHKII 160 (521) T ss_pred hhhHHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhhhhcceEEEEEEE Confidence 99999999988764321 1111000 000000000111111 1 122233334556677889999999885 Q ss_pred cCC--CcEEEEEeeccceEEEEEcCC-----C------cEEEEEEeeC-------------CeeEEechhheeeecc--C Q lcl|Aclame:pro 122 GSH--GYPEALFPLRPDYTNAYVHPT-----T------GMLWYQTVLN-------------GKAIELYDYEVLHFKG--L 173 (416) Q Consensus 122 ~~~--g~~~~l~~l~p~~v~~~~~~~-----~------~~~~~~~~~~-------------~~~~~~~~~~vih~~~--~ 173 (416) +++ .-+.+|..|+|..++.....- + ..-+|.|... +..+.++.+-|..... . T Consensus 161 d~~pk~GI~Elr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~vkI~~dAI~y~hSGl~ 240 (521) T protein:vir:81 161 GKNPKDGIVELRQLDPRNLEYVREIITEDTPEGKIYKATKEYFIYTVGNSSYCAGGQVFSPNSRVKIPRSAITYAHSGLM 240 (521) T ss_pred cCCccccceeeeeeCCcceeeeeeecccccCccceecceeeeeeeecCCccccccceeecCCcceeechhheeeeeccce Confidence 543 347899999999888654321 1 1122333221 2234455554433321 1 Q ss_pred CCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CCc--- Q lcl|Aclame:pro 174 STDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VEN--- 241 (416) Q Consensus 174 ~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~~--- 241 (416) ..++-.-+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .|. T Consensus 241 d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlpk~KAeqYl~~im~k~kNklvYDa~TGev~d 320 (521) T protein:vir:81 241 DCDDKYIIGYLHRAVKPANQLKLLEDAMVVYRITRAPERRVFFIDTGNMNNRKAAQHMNSVAQSFKNRVVYDASTGKLKN 320 (521) T ss_pred eCCCCeeeecchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeecccccccc Confidence 122334467888888888888877777664444444334444443 333 33444445554444332 121 Q ss_pred ----e-------eec---CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCC----c-ccHHHHHHH Q lcl|Aclame:pro 242 ----I-------AII---DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKAT----F-SNIEHQSIE 302 (416) Q Consensus 242 ----~-------~vl---~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~----~-s~~e~~~~~ 302 (416) . +.- ..|.+++.|.. ...+.-++-.++..+.+.++++||.+-++....+. . +-..-.-.. T Consensus 321 drk~msMlEDyWLpRReGgrgTEItTLpG-gqnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDEiK 399 (521) T protein:vir:81 321 QQANLSMTEDYWLQRRDGKAITDVTTLPG-ASGMSDIDDIRYFNRKLYEALRVPLSRSNLSDANMVIGGDGSEITRDELE 399 (521) T ss_pred cccccchhhhhcccccCCCcccceeeccc-CCCCChHHHHHHHHHHHHHHhCCccccccCCCCcceeccccchhhHHHHH Confidence 1 111 23455555543 22233344556788999999999999995333221 1 111111112 Q ss_pred HHHHHHHHHHHHHHHHHHH----hhcC-----chhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHHH--hCCCc Q lcl|Aclame:pro 303 YVRNTLQPWIVNFEQELNV----KLFL-----DHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTLH--ETGVL 363 (416) Q Consensus 303 f~~~~l~P~~~~i~~~l~~----~l~~-----~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~~--~~g~~ 363 (416) |..+ |.-+...++..|.. .|+. +.++.. ...|+|++..--... +..+++.+..+- -+-.+ T Consensus 400 F~KF-I~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~ 478 (521) T protein:vir:81 400 FSKF-IRTRQSQFSEVLRDPLKYNLILKNVITEDDWDREINNIKVVFHRDSYYTEVKDAEILERRIGLIERITPYIGKYF 478 (521) T ss_pred HHHH-HHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEEeecchHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 2222 44455555544443 3322 222111 122333332211111 122222222221 11223 Q ss_pred CHHHHHHH-hCCCCCCCCCeEeeccCccccccccc-cccccCCcccCCCCccCCC Q lcl|Aclame:pro 364 NKDEIREL-LERNPIENGDKYISSLNYVFLDFLEE-YQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 364 t~NE~R~~-~gl~p~~ggd~~~~~~n~~~~~~~~~-~~~~~~~~~~~gge~~~~~ 416 (416) +.+=+|+. |.+.-. .+....+ .++-.+.+--+..+.+.++ T Consensus 479 s~dyi~k~ILr~tDe-------------ei~~~~k~I~~E~~~~~~~~p~~~~~~ 520 (521) T protein:vir:81 479 SNQTVMRDILKYTDD-------------QMDTEKKQIEEEANDPRFKQTPDEIED 520 (521) T ss_pred chHHHHHHHhccCHH-------------HHHHHHHHHHHHhhCCCCCCCcccccC Confidence 44444442 222110 0000000 0000000111112333333 No 247 >protein:vir:78696 Length: 542 # NCBI annotation: head to tail connector # Family: family:all:481 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285446;genbank:gi:148724480;genbank:GeneID:5220167 Probab=59.19 E-value=0.4 Score=22.78 Aligned_cols=382 Identities=13% Similarity=0.056 Sum_probs=145.0 Q ss_pred Cc--chhhhcc-ccccccccccchhHHHhhhcCc-ccccc-cccc-HHHHhccHHHHHHHHHHHHhhcc------CcceE Q lcl|Aclame:pro 1 ML--LERMFEK-RSGSSDHEDGFNNILLNMFGGR-KTASG-ERVS-ESNSLVQPDIFACVNVLSDDIAK------LPIHT 68 (416) Q Consensus 1 m~--~~~~f~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~-~~~a~~~~~v~~~i~~ia~~ia~------~~~~~ 68 (416) |- +++.|.. ++........|. .+..+.-+. ....+ ..-+ ..... .++--.|++.+|+.+.+ -||-- T Consensus 1 mk~~a~~r~~~l~~~R~~~e~~w~-e~~~y~lP~~~~~~~~~~~~~~~~~~-dstg~~a~~~Laa~l~~~ltpp~~~WF~ 78 (542) T protein:vir:78 1 MKGLAQARYSAMRADREDFLDMAR-RCAALTLPYLLTEDGHASGGRLQQPY-QSLGSKGVNALSSKLMLSLFPIQTSFFK 78 (542) T ss_pred ChhHHHHHHHHHHHHhhHHHHHHH-HHHHHhccccCCCCCCcccccccccc-cchHHHHHHHHHHHHHHhhcCCCCcccc Confidence 43 1222221 111111111111 112221111 00000 0000 01112 23334566666655542 44532 Q ss_pred EeecCCc--ce--------eee-------ccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEE Q lcl|Aclame:pro 69 YKRTDGG--IE--------RKP-------EHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALF 131 (416) Q Consensus 69 ~~~~~~~--~~--------~~~-------~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~ 131 (416) ....+.. .. ... +.-....| .+- +.+.-+..+..+++.+||+.+++..+ +...+ T Consensus 79 l~~~d~~l~~~~~~~~~~~~~v~~~L~~ve~~~~~~l-~~s----nf~~~~~~~~~~L~~~G~a~l~~~~~----~~~~~ 149 (542) T protein:vir:78 79 LQINDAEIASVPELTPEVRSEIDMNLSKMEKMVMQQI-AES----SDRVQLTAAMKHLIVTGNVLVFAGKK----TLKVY 149 (542) T ss_pred ccCCHHHHHhhccCChhhHHHHHHHHHHHHHHHHHHH-Hhc----CcHHHHHHHHHHHHhhCeEEEEecCC----CceEE Confidence 2221100 00 000 01111222 233 34445556677888899999886543 24455 Q ss_pred eeccceEEEEEcCCCcEEEEE--Ee------------------------------------------------------- Q lcl|Aclame:pro 132 PLRPDYTNAYVHPTTGMLWYQ--TV------------------------------------------------------- 154 (416) Q Consensus 132 ~l~p~~v~~~~~~~~~~~~~~--~~------------------------------------------------------- 154 (416) |+. .+.+..+..|.+.... +. T Consensus 150 pl~--~y~v~~d~~G~vd~v~r~~~~t~~ql~~~fg~~~l~~~~~~~~~~~~~~~~~v~~~v~pr~~~~~~~~~~~~~~~ 227 (542) T protein:vir:78 150 PLD--RYVIERDGDGNVIEIITRELVDRSLLPAEFQKQSLLEGKDSNAVGEDGPKFGVAQGKGGRNDAEVFTCCKLVDGQ 227 (542) T ss_pred ecc--eeEEeeCCCCCeEEEeeeeecCHHHHHHhhccccCchHHHhhccccCCCeEEEEEEeecccCCccccccccCCCe Confidence 553 4555555555432110 00 Q ss_pred ------eCCeeE-------EechhheeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCc Q lcl|Aclame:pro 155 ------LNGKAI-------ELYDYEVLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAF 220 (416) Q Consensus 155 ------~~~~~~-------~~~~~~vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~ 220 (416) -.+..+ .+.....+-.|... ....||.||...+...+.....+.+.......-...|.+++..++. T Consensus 228 ~s~~~e~~g~~v~~~~~e~g~~~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~pp~lv~~~g~ 307 (542) T protein:vir:78 228 HRWHQECDGKEIKGSRSSSPLKHSPWLPLRFNVVDGESYGRGRVEEFFGDLSSLDALTRSLIEGSAAAAKVVFMVSPSAT 307 (542) T ss_pred EEEEEEeccccccccccccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccc Confidence 000000 00011222223222 2347999999999999999999999999999998889888877665 Q ss_pred CCHHHHHHHHHHHHHhhcCCceeec--CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHH Q lcl|Aclame:pro 221 LDEKPKENVRKEWKRVNKVENIAII--DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEH 298 (416) Q Consensus 221 ~~~e~~~~~~~~~~~~~~~~~~~vl--~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~ 298 (416) ..+..... ...+.++- ++.+...++....+-....+..+..+..|..+|-+ ....++..-++++ T Consensus 308 ~~~~~~~~---------~~~g~iv~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~rI~~aFl~-----~~~~d~~rvTAtE 373 (542) T protein:vir:78 308 TKPQSLAR---------AGTGAIIQGRAEDVSVVQANKGADFRTVQEMIRDLSQRISDAFLI-----LNVRQSERTTATE 373 (542) T ss_pred cchhhccc---------CCCceeecCCccceeeeecccccchhHHHHHHHHHHHHHHHHhcc-----cccCCcccccHHH Confidence 55433211 11122222 23333444443333333456667777788888743 2222332334444 Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHh-------------hcCchhcccccchhhhhhhhhhc-----cHHHHHHHHHHHH Q lcl|Aclame:pro 299 --QSIEYVRNTLQPWIVNFEQELNVK-------------LFLDHDQKSGHYVKFNIDSELRG-----DSKTQAEYLKTLH 358 (416) Q Consensus 299 --~~~~f~~~~l~P~~~~i~~~l~~~-------------l~~~~~~~~~~~~~f~~~~l~~~-----d~~~~~~~~~~~~ 358 (416) .+..=....|.|....++++|=.- +|++.... .++..+...+.. +.......+.... T Consensus 374 V~~r~~E~~~~LG~v~~rl~~E~L~Pli~R~~~il~r~g~lP~~p~~---lv~~~~~s~La~~~r~~~~~~l~~~~~~i~ 450 (542) T protein:vir:78 374 VREVQMELDRQLSGIYGSLTVELLTPYLNRKLHLMQRSKQLPSLPKG---LVMPTVVAGLGGVGRGEDRAALIEFMQTVG 450 (542) T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchh---ceeeeeechHHHHHHHHHHHHHHHHHHHHH Confidence 233344455666666665554321 23322111 122222222111 1111111111111 Q ss_pred hC-------CCcCHHHHH----HHhCCCCC---CCCCeEeecc----------------Cc-cccccccccccccCCccc Q lcl|Aclame:pro 359 ET-------GVLNKDEIR----ELLERNPI---ENGDKYISSL----------------NY-VFLDFLEEYQRLKAGGAM 407 (416) Q Consensus 359 ~~-------g~~t~NE~R----~~~gl~p~---~ggd~~~~~~----------------n~-~~~~~~~~~~~~~~~~~~ 407 (416) +. -.+..+++- +.+|.|+. ..-+++-.-. +. .+....+. ...+..+ T Consensus 451 ~~~~p~~l~~~id~d~~~~~~a~~~Gvp~~~i~~s~e~~~~~~~q~q~~~~~~al~~~a~~~a~~~~~~~--~~~~~~a- 527 (542) T protein:vir:78 451 QAMGPEALQQFIDPTEFLKRLAAASGIDTLNLVKSPETMANEAQQAQQQQMTASLMGQAGQLAKSPIGEK--MMQQINA- 527 (542) T ss_pred HhcCChhHHhcCCHHHHHHHHHHHcCCCHhhccCCHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccc--hhhhcCC- Confidence 10 011222221 22344421 1000000000 00 00000000 0000000 Q ss_pred CCCCccCCC Q lcl|Aclame:pro 408 KGGDNKNEG 416 (416) Q Consensus 408 ~gge~~~~~ 416 (416) .|..+-.| T Consensus 528 -~~~~~~~~ 535 (542) T protein:vir:78 528 -PGQEAPAG 535 (542) T ss_pred -CCcCCCCC Confidence 01111111 No 248 >protein:vir:94599 Length: 641 # NCBI annotation: PfWMP4_39 # Family: family:all:1548 # MgeID: mge:1525 # MgeName: Pf-WMP4 # Cross-refs: genbank:acc:YP_762669;genbank:gi:115304377;genbank:GeneID:5142299 Probab=52.72 E-value=0.55 Score=22.02 Aligned_cols=401 Identities=9% Similarity=-0.001 Sum_probs=154.0 Q ss_pred CcchhhhccccccccccccchhHH---------HhhhcCccccc-c-ccccHHHHhccHHHHHHHHHHHHhhccC--c-- Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNIL---------LNMFGGRKTAS-G-ERVSESNSLVQPDIFACVNVLSDDIAKL--P-- 65 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-~-~~~~~~~a~~~~~v~~~i~~ia~~ia~~--~-- 65 (416) -+.+++-.-++..+..+..|.+.. .+.+....+.. + .....+.-.-.+++..+++.|+..+.+. | T Consensus 28 ~l~~~~~~~~~~R~~~e~~W~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ki~~~~~~~~~~~l~s~Lm~~~~p~~ 107 (641) T protein:vir:94 28 VVISKWQESRDKRNTVENNWDETYELYRASAIDRQNTRARNFQTTGADDADWRHRINTGHTFEVVETLVAYFKGATFPSD 107 (641) T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHhhcchhhhhhcccccccccccchhcccccccchhHHHHHHHHhhHHhhhhcCCC Confidence 144443333333333333332211 01111111110 0 0111112234667888888888877763 2 Q ss_pred -c-eEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeec------------CCCcEE--- Q lcl|Aclame:pro 66 -I-HTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFG------------SHGYPE--- 128 (416) Q Consensus 66 -~-~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~------------~~g~~~--- 128 (416) | ++...+.+.... .+ -+-..++..-+. -.+.+-...++.+.+..|++++.+.+. ..|.+. T Consensus 108 ~wf~~~p~~~ed~~~-A~-~~~~~~~~~l~~-~~~~~~~~~~~~d~~~~g~~iv~~~w~~~~~~~~~~~~~~~~~~~~~~ 184 (641) T protein:vir:94 108 DWFDLKGMVPELADA-AR-VVKQLTKTKLEA-ASIRDIFETYVRNLVLYGVSTYRLGWDTSMERQFKRTFVETGDIFGGW 184 (641) T ss_pred ceEEEecCCCChHHH-HH-HHHHHHHHHHhh-cchHHHHHHHHHHHhhcCceEEEeehhhHHHHhhhhhcccchhhcccc Confidence 1 221111111100 00 001112222111 134555668889999999998765422 112111 Q ss_pred ------------EEEeeccceEEEEEcC----------------------CC---------------------------- Q lcl|Aclame:pro 129 ------------ALFPLRPDYTNAYVHP----------------------TT---------------------------- 146 (416) Q Consensus 129 ------------~l~~l~p~~v~~~~~~----------------------~~---------------------------- 146 (416) .+.|++|..+-+.... .| T Consensus 185 ~~~~v~~~~~~~r~~~v~~~di~~dps~~~~~~~f~~~r~t~~t~~~l~~eg~~~~d~v~~~~~~~~~~~~~d~~~d~~~ 264 (641) T protein:vir:94 185 EDVAVNRQRSELRIEPLSPYDVWLDTSGGKNTGTFVRLRHTREELHELVTSGYYDLDLTQVEQYVDYKFADPDTPKDVNG 264 (641) T ss_pred cccceecccceeeEEecchhheeecCCCCcccccceehhhhHHHHHHHHhcCCCChhhcchhhccccccccccccccccc Confidence 2233333221110000 00 Q ss_pred -----cEEE--E-EEeeCCee-----EEechh--------------heeeeccC-CCCccccccHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 147 -----GMLW--Y-QTVLNGKA-----IELYDY--------------EVLHFKGL-STDGIHGKSPIGVVREHIGAQAAAT 198 (416) Q Consensus 147 -----~~~~--~-~~~~~~~~-----~~~~~~--------------~vih~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~ 198 (416) ...+ | .+...+.. +++... ..++++.. .....||.||...+...+.....+. T Consensus 265 ~~~~~~~~~e~~gd~~~d~~~~~~~~~~~~g~~il~~~~~~~~d~~Pf~~~r~~~~~~~~YG~gp~~~~l~dqk~ln~l~ 344 (641) T protein:vir:94 265 TDTSGWDIIEYYGPLLVEGVQFWCVHAVFYGKQLIRLSDSKYWCGSPFVTTTLLPDRDSVYGMSVLHPNLGALHVLNVLT 344 (641) T ss_pred ccccccceeeeeeeeccCCCceeeEEEEEeCCEEeecccccccCcCCeEEecceecCCcccCCChHHHHHHHHHHHHHHH Confidence 0000 0 00000000 011111 23333433 2345899999999999999999999 Q ss_pred HHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHH-HHHHHHHHHHHHHHH Q lcl|Aclame:pro 199 KYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQ-FVESMKFNKAQISMI 277 (416) Q Consensus 199 ~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~-~~e~~~~~~~~Ia~~ 277 (416) +.......-...|..++..++..+++.. ..+.|+++.......+.++.....+.+ ...........|-.. T Consensus 345 r~~ld~~~~~~~p~~~~~~~~~~~~~~l---------~~~PG~ii~~~~~~~v~pl~~~~~~~~~~~~~~~~~~~~i~~~ 415 (641) T protein:vir:94 345 NGRLDNLVLHINKMWTLVEDGILKREDV---------KAKPGAVFKVAQHGSLQPIDMGRQDFVVTYQEAQVQESSVYRN 415 (641) T ss_pred HHHHHHHHHHhCCeeeecccccccccee---------eccCCcceeeCCCCcceeecCCccccchhHHHHHHHHHHHHHh Confidence 8888777777778777777766665433 123445555544444555532222211 122334444567777 Q ss_pred hccchhhcccc-cCCCcccHHHHH--------------HHHHHHHHHHHHHHHHHHHHHhhcCchh-------------- Q lcl|Aclame:pro 278 YKVPLHKLNEL-DKATFSNIEHQS--------------IEYVRNTLQPWIVNFEQELNVKLFLDHD-------------- 328 (416) Q Consensus 278 ~gvp~~~lg~~-~~~~~s~~e~~~--------------~~f~~~~l~P~~~~i~~~l~~~l~~~~~-------------- 328 (416) |++...+.+.. .++..-++.+.+ +.|-...|.|++..+-..+.+.+..+.- T Consensus 416 ~~~~~~~~~~~~~~~~~~TAtEV~~~~~e~~~~l~~i~r~l~~e~l~pll~~~~~~~~~~~~~p~i~R~~~~~~~~~~~~ 495 (641) T protein:vir:94 416 TSTGPLIGNAAPRGGERVTAAEIQGVRDAGGNRLSSVHTHIEDSSTLPLLNKVFSLLQQFYVTPETIRMYVPEEQMDGFF 495 (641) T ss_pred hhhhhhhcccccccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhchhhhcccCC Confidence 88876443332 222222322221 2344445555555444433332111100 Q ss_pred --cccccchhhhhhhhhhccHHHHHHHHHHH---HhCCC--------cCHHH----HHHHhCCCCCCCCCeEeeccCccc Q lcl|Aclame:pro 329 --QKSGHYVKFNIDSELRGDSKTQAEYLKTL---HETGV--------LNKDE----IRELLERNPIENGDKYISSLNYVF 391 (416) Q Consensus 329 --~~~~~~~~f~~~~l~~~d~~~~~~~~~~~---~~~g~--------~t~NE----~R~~~gl~p~~ggd~~~~~~n~~~ 391 (416) ........|++..+-......++..+..+ ++... +..+. +.+..|++ +|. .++.+-...+ T Consensus 496 ~~~p~~L~~~~~iv~l~~~q~~~~~~~i~~l~~~~~~~a~~P~v~d~~d~~~~~~~~~~~~g~~-~p~--~~ir~~~~~~ 572 (641) T protein:vir:94 496 EVSPEYLHYPYKFLALGANYVVERERMVTDLLQLLDISGRVPQIGQSLDYALILEDLLRQMRFT-DPM--RYIKKAEAPP 572 (641) T ss_pred CCCccceeeeeeEeecchhHHHHHHHHHHHHHHHHHHhhcChhhhhcCCHHHHHHHHHHHhCCC-Cch--hhccCccCch Confidence 00111223333333333333333333222 22211 11222 12233553 111 1111111111 Q ss_pred ccccccc----ccccCCcccCCCCccCCC Q lcl|Aclame:pro 392 LDFLEEY----QRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 392 ~~~~~~~----~~~~~~~~~~gge~~~~~ 416 (416) ...+-.. +......+.-||-.+++. T Consensus 573 ~~~~~~~~~~q~~~~~~a~~~~~~~~~~a 601 (641) T protein:vir:94 573 AAPPIAPAEPGALPPEMMNSVGGGLNDQA 601 (641) T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHH Confidence 0000000 000000011122222222 No 249 >protein:vir:6596 Length: 521 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:139 # MgeName: RB49 # Cross-refs: genbank:acc:NP_891727;genbank:gi:33620636;genbank:GeneID:1725288 Probab=50.03 E-value=0.62 Score=21.72 Aligned_cols=395 Identities=9% Similarity=0.053 Sum_probs=164.5 Q ss_pred Ccchhhhcc-----------cccccc-ccccchhHHHh--------hhcCcccccccc-----------c-cHHHHhccH Q lcl|Aclame:pro 1 MLLERMFEK-----------RSGSSD-HEDGFNNILLN--------MFGGRKTASGER-----------V-SESNSLVQP 48 (416) Q Consensus 1 m~~~~~f~~-----------~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~~~-----------~-~~~~a~~~~ 48 (416) =+|++|++- ++.+-. +...-+...+. ..++ .....+. + ..+..+.+| T Consensus 6 ~~~~~~~~~d~~~~~e~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~~~g-~~~~~~~~e~~~~~~~eLI~~YR~ma~~p 84 (521) T protein:vir:65 6 KMLARWADFDNDKYEEQIKDKAESIAAPKNNDGATEVEINDNSPASSWNS-LTQQFYSTDQKISTTKQLVNTYRGLMNNH 84 (521) T ss_pred hhhhhccCchhhHHHhhhccCCCcccCCCCCCCceeecccCCcccccccc-ceeeeccccchhhhHHHHHHHHHHHhhcc Confidence 333444441 111111 11000111110 0111 0000000 0 124556799 Q ss_pred HHHHHHHHHHHhhccCcc-----eEEeecC---CcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEe Q lcl|Aclame:pro 49 DIFACVNVLSDDIAKLPI-----HTYKRTD---GGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQ 120 (416) Q Consensus 49 ~v~~~i~~ia~~ia~~~~-----~~~~~~~---~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~ 120 (416) .|..||+.|.+.+.-..- .+--.+- ++.+..+.....+.+ . .++...--..++..|...|..|..++ T Consensus 85 Evd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il-~----ll~F~~~~~~~fR~WYVDgRi~fhki 159 (521) T protein:vir:65 85 EVENAVQNIVNDAIVFEEGHEVVSLNLEATGFSESVKERIHEEFKDLL-N----TIQFDRRGQDMFRRWYVDSRIFFHKI 159 (521) T ss_pred chhhHHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHH-H----HhccchhhhHHHhhhhhcceeEEEEE Confidence 999999999988764321 1111000 000000000111111 1 12223333445667788999999998 Q ss_pred ecCC--CcEEEEEeeccceEEEEEcC-----CCc------EEEEEEee-------------CCeeEEechhheeeecc-- Q lcl|Aclame:pro 121 FGSH--GYPEALFPLRPDYTNAYVHP-----TTG------MLWYQTVL-------------NGKAIELYDYEVLHFKG-- 172 (416) Q Consensus 121 r~~~--g~~~~l~~l~p~~v~~~~~~-----~~~------~~~~~~~~-------------~~~~~~~~~~~vih~~~-- 172 (416) .+++ .-+.+|..|+|..++..... .+. .-+|.|.. .+..+.++.+-|..... T Consensus 160 id~~pk~GI~ELr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~vkI~~dAI~y~hSGl 239 (521) T protein:vir:65 160 IGKNPKDGIVELRQLDPRNLEYVREIITEDTPEGKIYKATKEYFIYTVGNSSYCAGGQVFSPNSRVKIPRSAITYAHSGL 239 (521) T ss_pred EcCCccccceeeeeeCCcceeeeeeecccccCCcceecceeeeeeeecCCcceeccceeecCCcceeechhheeeeeccc Confidence 5543 34789999999988865432 111 12233322 12234455554433321 Q ss_pred CCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccC-CcC-CHHHHHHHHHHHHHhhc-------CCc-- Q lcl|Aclame:pro 173 LSTDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVP-AFL-DEKPKENVRKEWKRVNK-------VEN-- 241 (416) Q Consensus 173 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~-~~~-~~e~~~~~~~~~~~~~~-------~~~-- 241 (416) ...++-.-+|-+..+...+....-+++...=+--.-+.-+-|+.++ +.+ ..++.+=+++.+.+..| .|. T Consensus 240 ~d~~~~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ 319 (521) T protein:vir:65 240 MDCDDKYIIGYLHRAVKPANQLKLLEDAMVVYRITRAPERRVFFIDTGNMNNRKAAQHMNSVAQSFKNRVVYDASTGKLK 319 (521) T ss_pred eeCCCCeeeecchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEeeccccccc Confidence 1223334568888888888888877777664444444334444443 333 33444445554444332 121 Q ss_pred -----e-------eec---CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCC-----cccHHHHHH Q lcl|Aclame:pro 242 -----I-------AII---DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKAT-----FSNIEHQSI 301 (416) Q Consensus 242 -----~-------~vl---~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~-----~s~~e~~~~ 301 (416) . +.- ..|.+++.|.. ...+.-++-.++..+.+.++++||.+-++..+.+. .+-..-.-. T Consensus 320 ddrk~msMlEDyWLpRReGgrgTEItTLpG-gqnlgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~gr~~EItRDEi 398 (521) T protein:vir:65 320 NQQANLSMTEDYWLQRRDGKAITDVTTLPG-ASGMSDIDDIRYFNRKLYEALRVPLSRSNLSDANMVIGGDGSEITRDEL 398 (521) T ss_pred ccccccchhhhhcccccCCCCccceeeccc-CCCcChHHHHHHHHHHHHHHhCCCceeccCCCCcceeccccchhhHHHH Confidence 1 111 23455555543 22233344556788999999999999985433321 111111111 Q ss_pred HHHHHHHHHHHHHHHHHHHH----hhcC-----chhccc-ccchhhhhhhhhhcc-------HHHHHHHHHHHH--hCCC Q lcl|Aclame:pro 302 EYVRNTLQPWIVNFEQELNV----KLFL-----DHDQKS-GHYVKFNIDSELRGD-------SKTQAEYLKTLH--ETGV 362 (416) Q Consensus 302 ~f~~~~l~P~~~~i~~~l~~----~l~~-----~~~~~~-~~~~~f~~~~l~~~d-------~~~~~~~~~~~~--~~g~ 362 (416) .|..+ |.-+...++..|.. .|+. +.++.. ...|+|++..--... +..+++.+..+- -+-. T Consensus 399 KF~KF-I~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky 477 (521) T protein:vir:65 399 EFSKF-IRTLQSQFSEVLRDPLKYNLILKNVITEDDWDREINNIKVVFHRDSYYTEVKDAEILERRIGLIERITPYIGKY 477 (521) T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccc Confidence 23222 44455555554443 3322 221111 122333332211111 122223222221 1223 Q ss_pred cCHHHHHHH-hCCCCCCCCCeEeeccCccccccccc-cccccCCcccCCCCccCCC Q lcl|Aclame:pro 363 LNKDEIREL-LERNPIENGDKYISSLNYVFLDFLEE-YQRLKAGGAMKGGDNKNEG 416 (416) Q Consensus 363 ~t~NE~R~~-~gl~p~~ggd~~~~~~n~~~~~~~~~-~~~~~~~~~~~gge~~~~~ 416 (416) ++.+=+|+. |.+.-. .+....+ .++-.+.+--+..+.+.++ T Consensus 478 ~S~dyi~k~ILr~tDe-------------ei~~~~k~I~~E~~~~~~~~p~~~~~~ 520 (521) T protein:vir:65 478 FSNQTVMRDILKYTDD-------------QMDTEKKQIEEEANDPRFKQTPDEIED 520 (521) T ss_pred cchHHHHHHHhccCHH-------------HHHHHHHHHHHhhhCCCCCCCcccccC Confidence 355545442 222110 0000000 0000000111112333333 No 250 >protein:vir:94572 Length: 535 # NCBI annotation: Head-to-tail joining protein # Family: family:all:481 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919010;genbank:gi:119637774;genbank:GeneID:5179332 Probab=45.69 E-value=0.76 Score=21.23 Aligned_cols=389 Identities=10% Similarity=0.012 Sum_probs=144.2 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCc----cccccccccHHHHhccHHHHHHHHHHHHhhcc-----CcceEEee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGR----KTASGERVSESNSLVQPDIFACVNVLSDDIAK-----LPIHTYKR 71 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~-----~~~~~~~~ 71 (416) --|+++...|+.. ...|. .+.++.-+. .+...... .... -.++.-.|++.+|+.+.+ -||--... T Consensus 17 ~r~~~l~~~R~~~---e~~w~-e~~~y~lP~~~~~~~~~~~~~-~~~~-~dst~~~a~~~Laa~l~~~ltP~~~WF~l~~ 90 (535) T protein:vir:94 17 AVYDALKNDRNSY---ETRAE-NCAKYTIPSLFPKDSDNASTD-YTTP-WQAVGARGLNNLASKLMLALFPMQTWMKLTI 90 (535) T ss_pred HHHHHHHHHhhHH---HHHHH-HHHHHhccccCCCCCCccccc-cCCc-ccccHHHHHHHHHHHHHhhhcCCCCcccccc Confidence 2222222222211 11111 111111111 00000000 0111 123334455555555443 13322211 Q ss_pred cCCcceee---------eccc------hhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC-CCcEEEEEeecc Q lcl|Aclame:pro 72 TDGGIERK---------PEHK------SAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS-HGYPEALFPLRP 135 (416) Q Consensus 72 ~~~~~~~~---------~~~~------~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~-~g~~~~l~~l~p 135 (416) .+...... .... ....-+.+-| .+.=+..+..+++.+|++.+++..+. .+.+...||+ T Consensus 91 ~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~~~~~~sn----f~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~f~~~pl-- 164 (535) T protein:vir:94 91 SEFEAKQLVAQPAELAKVEEGLSMVERILMNYIESNS----YRVTLFETLKQLVVAGNALLYIPEPEGTYNPMKLYRL-- 164 (535) T ss_pred ChhhhhccccchhHHHHHHHHHHHHHHHHHHHHHhcC----cHHHHHHHHHHHHhhCcEeEeeccCcCcccceEEEEc-- Confidence 11110000 0000 0111122333 33444555678889999999986543 2334445555 Q ss_pred ceEEEEEcCCCcEEE-E-EE----------------------------------ee-C-----------CeeE------- Q lcl|Aclame:pro 136 DYTNAYVHPTTGMLW-Y-QT----------------------------------VL-N-----------GKAI------- 160 (416) Q Consensus 136 ~~v~~~~~~~~~~~~-~-~~----------------------------------~~-~-----------~~~~------- 160 (416) .++.+..+..|.+.- + .+ .. . +..+ T Consensus 165 ~~y~v~~d~~G~vd~i~r~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~e~~g~~~~~~~~~~ 244 (535) T protein:vir:94 165 SSYVVQRDAFGTVLQIVTLDKTAYAALPEDVRNSMDSSQEHKGDEMIDVYTHIYLDEESGEYLKYEEIDGVEVEGTDASY 244 (535) T ss_pred CeEEEeeCCCCCeEEEEeeeeccHHHhhHHHHHHHHhccccCCCceeEEEEEEEeeCCCCcEEEEEEecCeeeccccccC Confidence 455666665554311 1 00 00 0 0000 Q ss_pred EechhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcC Q lcl|Aclame:pro 161 ELYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKV 239 (416) Q Consensus 161 ~~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~ 239 (416) .+.....+..|.... ...||.||...+...+.....+.+.......-...|...+..++..++... ....++ T Consensus 245 g~~~~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~~-------~~~~~g 317 (535) T protein:vir:94 245 PVDACPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNPAGITQVRRL-------TKAQTG 317 (535) T ss_pred ccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccccccchhhc-------ccCCCc Confidence 011112333343322 347999999999999999999988888777777777777766665444322 111111 Q ss_pred CceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHH--HHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 240 ENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEH--QSIEYVRNTLQPWIVNFEQ 317 (416) Q Consensus 240 ~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~--~~~~f~~~~l~P~~~~i~~ 317 (416) .-+....+++...++...++-....+..+..+..|..+|=+. .+... ++..-++++ ++..=....|.|....+++ T Consensus 318 ~~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~rI~~af~~~--~~~~~-d~~rvTAtEV~~r~~E~~~~LGpv~~rl~~ 394 (535) T protein:vir:94 318 DFVSGRPEDISFLQLEKAADFSVARAVSEQIEGRLSYAFMLN--SAVQR-TGERVTAEEIRYVASELEDTLGGVYSILSQ 394 (535) T ss_pred eeecCCcccceeeecccccchhHHHHHHHHHHHHHHHHHhHh--hhccC-CCCCccHHHHHHHHHHHHHHhhhHHHHHHH Confidence 112223445556666654444444566677788888888322 22211 222223333 2333334445555555444 Q ss_pred HHH------------Hh-hcCchhcccccchhh--hhhhhhhc-cHHHHHHHHHHHHhCCCcCHHHHHH-HhCCCCC-CC Q lcl|Aclame:pro 318 ELN------------VK-LFLDHDQKSGHYVKF--NIDSELRG-DSKTQAEYLKTLHETGVLNKDEIRE-LLERNPI-EN 379 (416) Q Consensus 318 ~l~------------~~-l~~~~~~~~~~~~~f--~~~~l~~~-d~~~~~~~~~~~~~~g~~t~NE~R~-~~gl~p~-~g 379 (416) +|= +. +|++.... ...+.+ -+..+.+. +.+.....+..+.+ +-| |+.. .++.+.. .. T Consensus 395 ElL~Pli~r~~~il~r~g~lP~~p~~-~v~~~~vs~la~l~r~~~~~~l~~~~~~laq---~~P-~~ld~~id~d~~~~~ 469 (535) T protein:vir:94 395 ELQLPMVRVLLKQLQATNQIPELPKE-AVEPTISTGMEALGRGQDLDKLERCIAAWSA---LAP-MQGDPDINIATIKLR 469 (535) T ss_pred HHHHHHHHHHHHHHHhCCCCCCCChh-hccceEeehHHHHHHHHHHHHHHHHHHHHHh---hCh-HHhhhcCCHHHHHHH Confidence 442 22 33321111 112222 11111111 11111122221111 122 1211 1222211 00 Q ss_pred -CCeEeec-cCcccc-cccc-cc----cccc-------CCcccC-----CCCccCC-----C Q lcl|Aclame:pro 380 -GDKYISS-LNYVFL-DFLE-EY----QRLK-------AGGAMK-----GGDNKNE-----G 416 (416) Q Consensus 380 -gd~~~~~-~n~~~~-~~~~-~~----~~~~-------~~~~~~-----gge~~~~-----~ 416 (416) ++.+-+| .++..- +... .. +++. .+...+ ..++... | T Consensus 470 ~a~~~Gvp~~~i~rs~eev~~~~~q~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g 531 (535) T protein:vir:94 470 IANAIGIDTSGILKTPEEKQQEMAEAAQGTAMQNAAASAGAGAGTMATASPENMKAAAAQAG 531 (535) T ss_pred HHHHhCCChhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccChHHHHHHHHHhc Confidence 1111111 111110 0000 00 0000 000000 0000000 0 No 251 >protein:vir:100039 Length: 522 # NCBI annotation: T7-like head-to-tail connector # Family: family:all:481 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214201;genbank:gi:61806424;genbank:GeneID:3294719 Probab=43.78 E-value=0.83 Score=21.02 Aligned_cols=384 Identities=9% Similarity=0.012 Sum_probs=147.3 Q ss_pred Ccchhhhcccc-ccccccccchhHHHhhhcC----cc--ccccccccHHHHhccHHHHHHHHHHHHhhcc------Ccce Q lcl|Aclame:pro 1 MLLERMFEKRS-GSSDHEDGFNNILLNMFGG----RK--TASGERVSESNSLVQPDIFACVNVLSDDIAK------LPIH 67 (416) Q Consensus 1 m~~~~~f~~~~-~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~------~~~~ 67 (416) |-+...|.... ..+.....+. .+..+.-+ .. +..+... ....+ .++--.|++.+|+.+.+ .||- T Consensus 1 m~~~~r~~~L~~~R~~~e~~w~-e~~~~tlP~~~~~~~~~~~~~~~-~~~~~-dstg~~a~~~LAa~l~~~ltpp~~~WF 77 (522) T protein:vir:10 1 MKARERYNQLTTARQMFLDKAV-ECSELTLPYLIDDDISSRPNHKS-LTVPW-QSVGAKCCVTLAAKLMLAVLPPQTSFF 77 (522) T ss_pred CchHHHHHHHHHHhhHHHHHHH-HHHHHhhhcccCCCCCCCccccc-ccccc-cchHHHHHHHHHHHHHHhhcCCCCccc Confidence 87776665322 1112222221 12222211 10 0001000 01112 23334566666655542 4443 Q ss_pred EEeecCCcceee---------------eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEe Q lcl|Aclame:pro 68 TYKRTDGGIERK---------------PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFP 132 (416) Q Consensus 68 ~~~~~~~~~~~~---------------~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~ 132 (416) -....+..-... .++.+...| .+-| .+.-+..+..+++.+||+.+++..+. ...+| T Consensus 78 ~l~~~d~~l~~~~~~~~~~~v~~~l~~ve~~~~~~l-~~sn----f~~~~~~~~~~L~~~G~a~ly~~~~~----~~~~p 148 (522) T protein:vir:10 78 KLQVRDDKLGEELDPQIRSELDLSFSKMERMIMDYI-AASN----DRVAVHQALKHLIVGGNALIFMGKDG----LKTFP 148 (522) T ss_pred cccCChHHHhhhcChhhHHHHHHHHHHHHHHHHHHH-HhcC----cHHHHHHHHHHHHhHCceeEEEcCCC----ceEEE Confidence 222211100000 011111222 3333 44556666778899999998865432 33455 Q ss_pred eccceEEEEEcCCCcEEE-EE-Ee-------------------------------------eCC--eeEEe--chhh--- Q lcl|Aclame:pro 133 LRPDYTNAYVHPTTGMLW-YQ-TV-------------------------------------LNG--KAIEL--YDYE--- 166 (416) Q Consensus 133 l~p~~v~~~~~~~~~~~~-~~-~~-------------------------------------~~~--~~~~~--~~~~--- 166 (416) + ..+.+..+..|.+.. ++ +. ... ....+ ..+. T Consensus 149 l--~~y~v~~d~~G~vd~i~r~~~~t~~ql~~~fg~~~~~~~~~~~~~~~~~v~v~~~v~p~~~~~~~~~~~~~~~~~~~ 226 (522) T protein:vir:10 149 L--TRYVINRDGDGNVLEIVTKELISRKVLDIELPEPKPNTGIDESSTTNDDVTIYTYVKLDKSSGRWVWHQEAFDKIIP 226 (522) T ss_pred c--ceEEEeeCCCCCeeEEEeeeeccHHHHHHhcchhccchhhhcccCCCCceEEEEEEEeeccCCceEEEEccCCcccc Confidence 4 345555555554321 10 00 000 00000 0111 Q ss_pred ------------eeeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHH Q lcl|Aclame:pro 167 ------------VLHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEW 233 (416) Q Consensus 167 ------------vih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~ 233 (416) .+-.|... ....||.||...+...+.....+.+.......-...|.+++..++...+.... T Consensus 227 ~~~s~~g~~~~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~~~~~~~a~~p~~lv~~~~~~~~~~l~------ 300 (522) T protein:vir:10 227 DSRSTAPKNASPWLPLRFNTVDGEDYGRGRVEEFLGDLKSLDGLSQSLIEGAAAASKVVFLVSPSSTTKPATIA------ 300 (522) T ss_pred ccccccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeecccccccccccc------ Confidence 12222221 22479999999999999999999999999888888888888777655443221 Q ss_pred HHhhcCCceeec--CCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH--HHH------- Q lcl|Aclame:pro 234 KRVNKVENIAII--DYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ--SIE------- 302 (416) Q Consensus 234 ~~~~~~~~~~vl--~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~--~~~------- 302 (416) ..+.+.++- .+++...++....+-.-..+..+..+..|..+|= +....++..-++++. +.. T Consensus 301 ---~~~~~~~v~g~~~~v~~~~~~~~~d~~~~~~~i~~~~~ri~~aFl-----~~~~~d~~rvTAtEV~~r~~E~~~~LG 372 (522) T protein:vir:10 301 ---KAGNGAIVQGRPEDVAVIQVGKTADFSTAANMATAIEKRLLEAFL-----VMNVRNAERVTAEEVRLTQLELEQQLG 372 (522) T ss_pred ---CCCCcceecCCCccceeecccccccchHHHHHHHHHHHHHHHHHh-----hccCCCCCCCCHHHHHHHHHHHHHHhh Confidence 111222332 2334444444323322345556677777877772 222222322233332 222 Q ss_pred -----HHHHHHHHHHHHHHHHHHHh-hcCchhccc-ccchhhhhhhhhhccH-HHHHHHHHHHHhC-------CCcCHHH Q lcl|Aclame:pro 303 -----YVRNTLQPWIVNFEQELNVK-LFLDHDQKS-GHYVKFNIDSELRGDS-KTQAEYLKTLHET-------GVLNKDE 367 (416) Q Consensus 303 -----f~~~~l~P~~~~i~~~l~~~-l~~~~~~~~-~~~~~f~~~~l~~~d~-~~~~~~~~~~~~~-------g~~t~NE 367 (416) +...-+.|++...-..+.+. +|++..... ...+.--++.|-+.-. +....++..+.+. -.+..++ T Consensus 373 pv~~rl~~E~l~Pli~r~~~il~r~g~lP~~p~~~~~~~~v~~is~Laraq~~~~l~~~~~~i~~~~~p~~~~~~id~d~ 452 (522) T protein:vir:10 373 GIFSLLVIEFLIPYLNRTLLVLQRSNQIPKLPKDIVRPTIVAGVNALGRGQDRESLTAFVGTIAQTLGPEALMQYLNPLE 452 (522) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHhhCchhhhhcCCHHH Confidence 34444555554444444443 333322211 1111111222221111 1111111111110 0111122 Q ss_pred ----HHHHhCCCCCCCCCeEeeccCccccccccccccccC----------Cccc-CCCCccCCC Q lcl|Aclame:pro 368 ----IRELLERNPIENGDKYISSLNYVFLDFLEEYQRLKA----------GGAM-KGGDNKNEG 416 (416) Q Consensus 368 ----~R~~~gl~p~~ggd~~~~~~n~~~~~~~~~~~~~~~----------~~~~-~gge~~~~~ 416 (416) +-+.+|.|+. ..+..+-........-..+++.+ +... ++.+| -++ T Consensus 453 ~~~~~a~~~Gvp~~---~ivrt~eev~~~~q~~q~~~~~~~~~~~a~~~~~~~~~~~~~~-~~~ 512 (522) T protein:vir:10 453 AIKRLAAAQGIDVL---NLVKTEQQLAEEQQAAQQQAAQQSLVDQAGQMTGSPLMDPTKN-PQL 512 (522) T ss_pred HHHHHHHHhCCChh---hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccc-HHH Confidence 1112333210 00000000000000000000000 0000 01111 111 No 252 >protein:vir:78393 Length: 489 # NCBI annotation: putative structural protein # Family: family:all:584 # MgeID: mge:1851 # MgeName: SETP3 # Cross-refs: genbank:acc:YP_001110831;genbank:gi:134288592;genbank:GeneID:5179656 Probab=38.93 E-value=1 Score=20.49 Aligned_cols=388 Identities=11% Similarity=0.038 Sum_probs=163.9 Q ss_pred Ccchhhhcccccccccccc------chhHHHhhhcCccc--ccc-------ccccH---HH----HhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDG------FNNILLNMFGGRKT--ASG-------ERVSE---SN----SLVQPDIFACVNVLS 58 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~------~~~~~~~~~~~~~~--~~~-------~~~~~---~~----a~~~~~v~~~i~~ia 58 (416) |+--+ ++++..+....- -...+.+..+|..+ ... ..-+. .. |.-.+++...++.++ T Consensus 1 ~~~~~--~~~~~V~~~hp~y~a~~~~W~~ird~~~G~~~~~~r~~yl~~~~~~~~e~~Y~~rl~rA~~~n~~~~tl~~l~ 78 (489) T protein:vir:78 1 MLTEN--GQGSGVKTKHREWLHYAPKWQKVRHALAGELVSYLRNVGLNEPDKAYGEARQAEYEAGGIVYNFTRRTLSGMV 78 (489) T ss_pred CccCC--CccCCCCccCHHHHHHHHHHHHHHHHhcCcccccccCCCCCCCCCCCChHHHHHHHhccccCChHHHHHHHHh Confidence 55433 444443332221 12334455555221 100 00011 11 112344555666555 Q ss_pred HhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCc------------ Q lcl|Aclame:pro 59 DDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGY------------ 126 (416) Q Consensus 59 ~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~------------ 126 (416) ..+.+-|..+- ....+..++-+---..-+-.+|.+.++...+.+|.+++++..+..|. T Consensus 79 G~vfrk~p~~~----------~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~T~ade~~~~~r 148 (489) T protein:vir:78 79 GSVMRKEPEIN----------IPKELEYLLKNADGSGVGLIQHAQDTLMEIDSVGRGGLLVDAPETGAATAAEQNAGLLN 148 (489) T ss_pred chhhcCCccee----------ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeeCCCCCcCHHHHHHhcCC Confidence 55555554331 11223333333333556789999999999999999999998765542 Q ss_pred EEEEEeeccceEEEE-----------------E-----cCCCc---EE---EE---------------EEeeCCeeE--- Q lcl|Aclame:pro 127 PEALFPLRPDYTNAY-----------------V-----HPTTG---ML---WY---------------QTVLNGKAI--- 160 (416) Q Consensus 127 ~~~l~~l~p~~v~~~-----------------~-----~~~~~---~~---~~---------------~~~~~~~~~--- 160 (416) | .+..+.|..|--+ . ++.++ .. |+ +....+... T Consensus 149 P-y~~~~~~~~IinW~~~~v~G~~~Lt~v~lrE~~~~~d~~~~f~~~~~~q~RvL~~~~~g~~~~~~~r~~~~g~~~~~~ 227 (489) T protein:vir:78 149 P-TIAFYTTENIVNWRLTRVGSVNRVTMVVLRETWEYNEPGNEFETKYGEQYRVLDIDSDGNYRQRLFRFDAEGGAQEDV 227 (489) T ss_pred c-EEEEechhhhcCceeeeeCCccceeEEEEEEeEEeecCCCCccceeEEEEEEEecCCCcceEEEEEEeecCCccccee Confidence 2 2333333222111 0 10000 00 00 000001000 Q ss_pred -Eechh------heeeecc---CCCCccccccHHHHHHH-HHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHH Q lcl|Aclame:pro 161 -ELYDY------EVLHFKG---LSTDGIHGKSPIGVVRE-HIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENV 229 (416) Q Consensus 161 -~~~~~------~vih~~~---~~~~~~~G~s~~~~~~~-~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~ 229 (416) .+.++ ..|-|.. ...+...+.+|+..++. .+........ ....+...+.|-.+++-....+++..+.. T Consensus 228 ~~~~~~~g~~~l~~IPfv~~~~~~~~~~~~~pPLl~LA~lni~Hy~~ssd-~~~~l~~~~~P~l~i~G~d~~~~~~~~~~ 306 (489) T protein:vir:78 228 VEIYPDLGESLRGVIPFTFIGATNNDATIDDAPLLPLAELNIGHYRNSAD-NEESSFVVGQPTLFIYPGENLTPQAFKEA 306 (489) T ss_pred eEEeccCCCCccCeeeEEEEecCCCCCCCCcCchHHHHHHHHHHhhhhhH-HHHHHHHcccceeeeecCccCCccccccc Confidence 00000 0111111 11123456777766554 4444444444 44455566678777775444444433322 Q ss_pred HHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 RKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQ 309 (416) Q Consensus 230 ~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l~ 309 (416) ...- =...++..+.++.+.++.-+..+...+. .+.++.... .+..+-..++.- ...-.+.........-+..|. T Consensus 307 ~~~~-i~~g~~~~~~lp~~~~~~~ie~~~~~~~-r~~l~~le~---qm~~lGa~l~~~-~~~~Ta~~~~~~~~~~~S~L~ 380 (489) T protein:vir:78 307 NPNG-IKFGSRRGHNLGYGGSAQLIQAGENNLA-RQNMLDKEQ---QAIQIGAQLITP-TQQITAQSARIQRGADTSVMA 380 (489) T ss_pred Cccc-eeeCCcccccCCCCCCcceeccCcchHH-HHHHHHHHH---HHHHHhhhhccC-CcchhHHHHHHHHHHhhHHHH Confidence 2110 0113344667777665555544444332 222222222 222222233321 111112222334455577788 Q ss_pred HHHHHHHHHHHHhhc--Cchh-ccccc--chhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEe Q lcl|Aclame:pro 310 PWIVNFEQELNVKLF--LDHD-QKSGH--YVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYI 384 (416) Q Consensus 310 P~~~~i~~~l~~~l~--~~~~-~~~~~--~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggd~~~ 384 (416) -++.++++.+++.|- -... ...+. .|..+.+=....-......++.+++++|.++....++.+-.--+.+.+ T Consensus 381 ~~a~~~e~al~~~l~~~a~w~G~~~~~~~~i~~n~dF~~~~~d~~~~~al~~~~~~G~is~~t~~~~L~~~gv~d~~--- 457 (489) T protein:vir:78 381 TIARNVSQAYTDALRWVAVMLGKPEDTEVEFRLNMDFFLEPMTAQDRAAWMADINAGLLPATAYYAALRKAGVTDWT--- 457 (489) T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCceEEEeecccCcccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCCCCcc--- Confidence 888899998887642 1110 11122 222222222222223456777788999999999988876442221100 Q ss_pred eccCcccccccccccc-----ccCCcccCCCCccCC Q lcl|Aclame:pro 385 SSLNYVFLDFLEEYQR-----LKAGGAMKGGDNKNE 415 (416) Q Consensus 385 ~~~n~~~~~~~~~~~~-----~~~~~~~~gge~~~~ 415 (416) +..+..--+.+. ...|+-..++.++++ T Consensus 458 ----~e~~~~ei~~~~~~~~~~~~g~~~~~~q~~~~ 489 (489) T protein:vir:78 458 ----DADIKDAVADQPLPVATEVQGEIPQSAQQQEK 489 (489) T ss_pred ----HHHHHHHHhhcCCCcccCCcccCCCCcccccC Confidence 000000000000 111111122222233 No 253 >protein:vir:99672 Length: 532 # NCBI annotation: Head-to-tail joining protein # Family: family:all:481 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249587;genbank:gi:68299738;genbank:GeneID:3799987 Probab=38.39 E-value=1.1 Score=20.42 Aligned_cols=386 Identities=9% Similarity=0.023 Sum_probs=145.8 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhcc------CcceEEeecCC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAK------LPIHTYKRTDG 74 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~------~~~~~~~~~~~ 74 (416) --|+++...|+.....-.-...+.........+..+..... .. -.++.-.|++.+|..+.+ -||--....+. T Consensus 16 ~r~~~l~~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~-~~-~dst~~~a~~~LAa~L~~~ltpp~~~WF~l~~~d~ 93 (532) T protein:vir:99 16 AAYNRLKNDRGAYETRAEDCATYTIPSVFPSATADGSTSYT-TP-WQSIGARGLNNLASKLMLALFPVGSSFFKLNVSEL 93 (532) T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhhcccCCCCCcchhhcc-cc-ccchHHHHHHHHHHHHHHhhcCCCCccccccCCHH Confidence 12222222222111110001111111111111111111001 11 233445566666665543 44432222211 Q ss_pred cceee---------eccc------hhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC--CCc--EEEEEeecc Q lcl|Aclame:pro 75 GIERK---------PEHK------SAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS--HGY--PEALFPLRP 135 (416) Q Consensus 75 ~~~~~---------~~~~------~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~--~g~--~~~l~~l~p 135 (416) .-.+. +... .....+.+-| .+.-+..+..++..+|++.+++..+. .++ ....+|+ T Consensus 94 ~l~~~~~~~~~~~~v~~~L~~ve~~~~~~~~~sn----f~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~~~~f~~~pl-- 167 (532) T protein:vir:99 94 EVKQSITSPEELTEIATGLAMVERICMNYMESNS----FRPTLHAAIKQLLVAGNVLLYIPSTEQVEGQSNAPKLYKL-- 167 (532) T ss_pred HHhccCCChhhHHHHHHHHHHHHHHHHHHHHhcC----cHHHHHHHHHHHHhHCcEeEEecccccccCcccceEEEEc-- Confidence 10000 0000 1111223333 44455566678889999998875432 122 3444554 Q ss_pred ceEEEEEcCCCcEEE-E-EEee------------------------------------CCeeE----Eec---------- Q lcl|Aclame:pro 136 DYTNAYVHPTTGMLW-Y-QTVL------------------------------------NGKAI----ELY---------- 163 (416) Q Consensus 136 ~~v~~~~~~~~~~~~-~-~~~~------------------------------------~~~~~----~~~---------- 163 (416) ..+.+..+..|.+.- + .... .+... .+. T Consensus 168 ~~y~v~~d~~G~v~~ivrr~~~~~~~l~e~~~~~~~~~~~~~~p~~~v~v~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 247 (532) T protein:vir:99 168 HNFVVERDAYDNVLQIVTEDKIARAALPEDVRKSLEDAQGDQNPSEEVTIYTHVYRDPEAMVFRSYQEIDGEIVAGTEGE 247 (532) T ss_pred CeEEEeeCCCCCeeeEeeeeeecHHhcChHHHHHhhccccccCCCcceEEEEEEEecCCCCeeEEEEeecCceecccccc Confidence 355555565554311 0 0000 00000 000 Q ss_pred ----hhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhc Q lcl|Aclame:pro 164 ----DYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNK 238 (416) Q Consensus 164 ----~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~ 238 (416) ....+-.|.... ...||.||...+...+.....+.+.......-...|.+.+..++...+..... . T Consensus 248 ~~~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~~~~-------~-- 318 (532) T protein:vir:99 248 YPLDSCPWIPVRLIKMPNEDYGRSFVEEYLGDLKSLENLYEAIVKMSMISSKVLFFVNPNGVTQIRRVAK-------A-- 318 (532) T ss_pred cccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeccccccchhhhcc-------C-- Confidence 011122222212 24799999999999999999999998888888888888887776655443211 1 Q ss_pred CCceee--cCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH--HHHHHHHHHHHHHHH Q lcl|Aclame:pro 239 VENIAI--IDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ--SIEYVRNTLQPWIVN 314 (416) Q Consensus 239 ~~~~~v--l~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~--~~~f~~~~l~P~~~~ 314 (416) +.+.++ -.+.+...++....+-....+..+..+..|..+|=+.. +.. .++..-++++. +..=....|.|.... T Consensus 319 ~~g~~v~g~~~~i~~~~~~~~~~~~~~~~~i~~~~~rI~~af~~~~--~~~-~d~~r~TAtEV~~r~~E~~~~LGpv~~r 395 (532) T protein:vir:99 319 NTGDFVAGRKQDVEVFQLEKYNDFQVAKATADDIEKRLSYAFMLNS--AVQ-RGGDRVTAEEIRYVAGELEDTLGGVYSL 395 (532) T ss_pred CCcceecCCcccceeeecccccchhHHHHHHHHHHHHHHHHHhhhh--ccc-CCCCcccHHHHHHHHHHHHHHhhHHHHH Confidence 111222 23334444544433333345566777788888884432 211 12222233332 223333444555444 Q ss_pred HHHHHH------------Hh-hcCchhc-ccccchhhhhhhhhhccH-HHHHHHHHHHHhC-----CCcCHHHH----HH Q lcl|Aclame:pro 315 FEQELN------------VK-LFLDHDQ-KSGHYVKFNIDSELRGDS-KTQAEYLKTLHET-----GVLNKDEI----RE 370 (416) Q Consensus 315 i~~~l~------------~~-l~~~~~~-~~~~~~~f~~~~l~~~d~-~~~~~~~~~~~~~-----g~~t~NE~----R~ 370 (416) +.++|= +. +|++... ..+..+...++.|-+.-. +....++..+.+. -.+..+++ .+ T Consensus 396 l~~E~l~Pli~r~~~il~r~g~lP~~p~~~~~~~iv~~is~Laraq~~~~l~~~~~~laq~~p~~~d~id~d~~~~~~a~ 475 (532) T protein:vir:99 396 LSQELQLPLVKILLKELQATSKIPNLPKEAVEPAIATGLEALGRGHDLNKLNVFIDYMIKLAGLQDDDINLLDVKMRLAN 475 (532) T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCChhhcccceeecchHHHHHHHHHHHHHHHHHHHhhcchhhhhCCHHHHHHHHHH Confidence 444442 22 3332111 112222222333322111 1111111111110 11222221 12 Q ss_pred HhCCCCCCCCCeEeeccCccccc-cccc---cccccC------------CcccCCCCccCCC Q lcl|Aclame:pro 371 LLERNPIENGDKYISSLNYVFLD-FLEE---YQRLKA------------GGAMKGGDNKNEG 416 (416) Q Consensus 371 ~~gl~p~~ggd~~~~~~n~~~~~-~~~~---~~~~~~------------~~~~~gge~~~~~ 416 (416) .+|.+| .+++..+ .... .++..+ ++....-.+.++. T Consensus 476 ~~GV~~----------~~i~r~~ee~~~~~~q~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 527 (532) T protein:vir:99 476 SLGMDT----------TGLILTQQDKQAKMAEASTAAGMVTAGQQMGAAGGQAAAAMMQQQA 527 (532) T ss_pred HhCCCh----------hhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHhhc Confidence 233322 1111000 0000 000000 0000001111111 No 254 >protein:vir:1538 Length: 535 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052106;swissprot:trembl:q9t110;genbank:gi:9634032;uniprot:Q9T110;genbank:GeneID:1262384 Probab=34.08 E-value=1.3 Score=19.93 Aligned_cols=385 Identities=8% Similarity=-0.017 Sum_probs=149.8 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCc----cccccccccHHHHhccHHHHHHHHHHHHhhcc-----CcceEEee Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGR----KTASGERVSESNSLVQPDIFACVNVLSDDIAK-----LPIHTYKR 71 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~-----~~~~~~~~ 71 (416) --|+++...|+.. ...|. .+..+.-+. .+...... ....+ .++.-.|++.+|+.+.+ -||--... T Consensus 16 ~r~~~l~~~R~~~---e~~w~-e~~~~~lP~~~~~~~~~~~~~-~~~~~-dst~~~a~~~Laa~l~~~ltP~~~WF~l~~ 89 (535) T protein:vir:15 16 ATYDRLTNDRRAY---ETRAE-NCAQYTIPSLFPKESDNESTD-YTTPW-QAVGARGLNNLASKLMLALFPMQSWMKLTI 89 (535) T ss_pred HHHHHHHHHhhHH---HHHHH-HHHHHhcccccCCCCCccccc-ccccc-cccHHHHHHHHHHHHHHhhcCCCccccccc Confidence 1222222222211 11111 111111111 11000000 01112 33334566666655543 13322221 Q ss_pred cCCccee----------------eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCC-cEEEEEeec Q lcl|Aclame:pro 72 TDGGIER----------------KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHG-YPEALFPLR 134 (416) Q Consensus 72 ~~~~~~~----------------~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g-~~~~l~~l~ 134 (416) .+....+ .++..+...| .+-| .+.-+..+..+++.+|++.+++..+..+ .+...||+ T Consensus 90 ~d~~~~~~~~~~~~~~~v~~~L~~ve~~~~~~l-~~sn----f~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~f~~~pl- 163 (535) T protein:vir:15 90 SEYEAKQLVGDPDGLAKVDEGLSMVERIIMNYI-ESNS----YRVTLFECLKQLIVAGNALLYLPEPEGSYNPMKLYRL- 163 (535) T ss_pred ChHHHhccCCCcchHHHHHHHHHHHHHHHHHHH-HhcC----cHHHHHHHHHHHHhhCceeEEeecCCCCceeeEEEEc- Confidence 1100000 0011122222 3333 4455556677888999999998655432 23455555 Q ss_pred cceEEEEEcCCCcEEE--EEE-----------------------------------e-eCCeeE----E----------- Q lcl|Aclame:pro 135 PDYTNAYVHPTTGMLW--YQT-----------------------------------V-LNGKAI----E----------- 161 (416) Q Consensus 135 p~~v~~~~~~~~~~~~--~~~-----------------------------------~-~~~~~~----~----------- 161 (416) .++.+..+..|.+.. ..+ . ..+..+ . T Consensus 164 -~~~~v~~d~~G~vd~i~r~~~~t~~~l~~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~e~~g~~~~~~~~ 242 (535) T protein:vir:15 164 -SSYVVQRDAYGNVLQIVTRDQIAFGALPEDVRSAVEKAGGEKKMDEMVDVYTHVYLDEESGDYLKYEEVEDVEIDGSDA 242 (535) T ss_pred -CeeEEeeCCCCCeeEEEEeEeecHHHHHHHHhHhhhccccccCCCCceeEEEEEEEecCCCcEEEEEEeeCcccccccc Confidence 456665665553211 000 0 000000 0 Q ss_pred ---echhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhh Q lcl|Aclame:pro 162 ---LYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVN 237 (416) Q Consensus 162 ---~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~ 237 (416) +.....+..|.... ...||.||...+...+.....+.+.......-...|.+++..++...+..... T Consensus 243 ~~~~~~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~lv~~~g~~~~~~l~~--------- 313 (535) T protein:vir:15 243 TYPTDAMPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNPAGITQPRRLTK--------- 313 (535) T ss_pred ccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeecccccccchhccc--------- Confidence 00112333333322 34799999999999999999999999999999989988877666555433211 Q ss_pred cCCceee--cCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH--HH------------ Q lcl|Aclame:pro 238 KVENIAI--IDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ--SI------------ 301 (416) Q Consensus 238 ~~~~~~v--l~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~--~~------------ 301 (416) .+.+.++ -++++...++....+-....+..+..+..|..+|=+. .+...+ +..-++++. +. T Consensus 314 ~~~g~~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~~I~~af~~~--~~~~~~-~~r~TAtEV~~r~~E~~~~LG~v~~ 390 (535) T protein:vir:15 314 AQTGDFVPGRREDIDFLQLEKQADFTVAKAVSDQIEARLSYAFMLN--SAVQRT-GERVTAEEIRYVASELEDTLGGVYS 390 (535) T ss_pred CCceeeecCCcccceeeecccccchhHHHHHHHHHHHHHHHHHhhh--hcccCC-CccccHHHHHHHHHHHHHHHhHHHH Confidence 1112222 2344555555554444445566677788888888443 222122 222233332 22 Q ss_pred HHHHHHHHHHHHHHHHHHHHh-hcCchhcccccchhhhhhhhhhccH----HHHHHHHHHHHhC-----C-CcCHHHH-- Q lcl|Aclame:pro 302 EYVRNTLQPWIVNFEQELNVK-LFLDHDQKSGHYVKFNIDSELRGDS----KTQAEYLKTLHET-----G-VLNKDEI-- 368 (416) Q Consensus 302 ~f~~~~l~P~~~~i~~~l~~~-l~~~~~~~~~~~~~f~~~~l~~~d~----~~~~~~~~~~~~~-----g-~~t~NE~-- 368 (416) .+-..-+.|++...-..+.+. +|++... ....+++ .+.|-..-. +.....+..+... . .+..+++ T Consensus 391 rl~~Ell~Pli~r~~~il~r~g~lP~~p~-~~v~~~y-is~La~aqr~~~~~~l~~~~~~la~~~P~~ld~~id~d~~~~ 468 (535) T protein:vir:15 391 ILSQELQLPLVRVLLKQLQATSQIPELPK-EAVEPTI-STGLEAIGRGQDLDKLERCISAWAALAPMQGDPDINLAVIKL 468 (535) T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCc-cceeEEE-ecHHHHHHHHHHHHHHHHHHHHHHhcChhhhhccCCHHHHHH Confidence 244444555554444444333 3332211 1222322 122211111 1111111111110 0 0112221 Q ss_pred --HHHhCCCCCCCCCeEeeccCc-ccccc--ccccccccCCcccCCCC-----ccCCC Q lcl|Aclame:pro 369 --RELLERNPIENGDKYISSLNY-VFLDF--LEEYQRLKAGGAMKGGD-----NKNEG 416 (416) Q Consensus 369 --R~~~gl~p~~ggd~~~~~~n~-~~~~~--~~~~~~~~~~~~~~gge-----~~~~~ 416 (416) .+.+|.|+. . ++-+..- ..+-. ....+++..-++..++. .+.|. T Consensus 469 ~~a~~~Gvp~~---~-i~~~~eev~~~~~q~~~~~~~~~~a~~~g~~~~~~~~~~p~~ 522 (535) T protein:vir:15 469 RIANAIGIDTS---G-ILLTDEQKQALMMQDAAQTGIENAAATGGAGVGALATSSPEA 522 (535) T ss_pred HHHHHcCCChh---h-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhccChHH Confidence 122344321 0 0000000 00000 00000000000000000 00111 No 255 >protein:vir:103765 Length: 549 # NCBI annotation: hypothetical protein # Family: family:all:481 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024925;genbank:gi:48697195;genbank:GeneID:2846089 Probab=30.89 E-value=1.5 Score=19.56 Aligned_cols=386 Identities=11% Similarity=-0.037 Sum_probs=151.8 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhc------cCcceEEeecCC Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIA------KLPIHTYKRTDG 74 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia------~~~~~~~~~~~~ 74 (416) -+..+|-+-. ..+.+.. ..+.... ...+..+.....+ .+ .++--.|++.+|+.+. +.||--....++ T Consensus 25 ~~e~~w~e~~-~~~lP~~---~~~~~~~-~~~~~~~~~~~~~-~~-dstg~~a~~~LAs~l~~~ltpp~~~wF~l~~~~~ 97 (549) T protein:vir:10 25 SYEAVWNDVI-DYLMPRL---DKFGQLP-RPDSEKGRERSQK-MF-DSTAPLALRNFVAAMDSMITPATQLWHRLKTGND 97 (549) T ss_pred hHHHHHHHHH-HHhcccc---ccccccC-CCCCCcccccccc-cc-cchHHHHHHHHHHHHHhhccCCCCccccccCCcc Confidence 2222211100 0000000 0000000 0000001100000 01 1112234444444433 234432222221 Q ss_pred cceee---------eccchhhhhc-cccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEEEEEcC Q lcl|Aclame:pro 75 GIERK---------PEHKSAHAVY-ARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHP 144 (416) Q Consensus 75 ~~~~~---------~~~~~~~~l~-~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~~~~~~ 144 (416) .-.+. ++..+...++ .+-|. +.-+-.+..+++.+|++.+++..+. ++...+..++...+.+..+. T Consensus 98 ~~~e~~~v~~~l~~ve~~~~~~~~~~~snf----~~~~~~~~~~L~~~Gta~l~~~~~~-~~~~~f~~~pl~~~~v~~d~ 172 (549) T protein:vir:10 98 ALNEIASVKAYLQGVVRTLFAARYRWQGGF----VTQMGATYQSIGLFGPGALMIEHDV-GKGIVYRNVPMQRLWFAENN 172 (549) T ss_pred chhhhhHHHHHHHHHHHHHHHHHhhhhcCh----HHHHHHHHHHHHhhcceeeEEeecC-CCeeEEEEEEcCeEEEeeCC Confidence 10000 0011111121 13333 3344556688899999999987654 44556666666778887887 Q ss_pred CCcEEEEEE--e-----------e--------------CCeeEEe-----c------------------------hhhe- Q lcl|Aclame:pro 145 TTGMLWYQT--V-----------L--------------NGKAIEL-----Y------------------------DYEV- 167 (416) Q Consensus 145 ~~~~~~~~~--~-----------~--------------~~~~~~~-----~------------------------~~~v- 167 (416) .|.+..... . . ....+++ | .+.| T Consensus 173 ~G~vd~i~r~~~~t~~ql~~~fg~~~l~~~v~~~~~~~~~~~~~v~~~V~pr~~~~~~~~~~~~~pf~sv~~e~~~~~il 252 (549) T protein:vir:10 173 SGLIDKTHVQWELTLRQAAQRFGRENLSPSMQSTLEKDPEKSAIFYHAVEPRADRDPRKLDGRNMQFASYWLDEGRDRIV 252 (549) T ss_pred CCCeEEEEEEeecCHHHHHHhcCcccCCHHHHHHhhcCCCceEEEEEEeecCCCCCccccccccCceEEEEEEecCCEee Confidence 776532110 0 0 0000000 0 0001 Q ss_pred ----------eeeccCC-CCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHh Q lcl|Aclame:pro 168 ----------LHFKGLS-TDGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRV 236 (416) Q Consensus 168 ----------ih~~~~~-~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~ 236 (416) +-.|... ....||.||...+...+.....+.+.......-...|.+.+..++..++... T Consensus 253 ~esg~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~~v~~~g~~~~~~l---------- 322 (549) T protein:vir:10 253 QNSGFRTFPFAIGRFYVGTDDVYGGSPAYDAMPDVRMANDMAKTNIRGAQKLVDPPLLANEDGVLDGFDL---------- 322 (549) T ss_pred ccCCcccCCcceeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeecccccccccee---------- Confidence 1111111 1247999999999999999999999999888888889888766665554221 Q ss_pred hcCCceee---cCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchh-hcccccCCCcccHHH--HHHHHHHHHHHH Q lcl|Aclame:pro 237 NKVENIAI---IDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLH-KLNELDKATFSNIEH--QSIEYVRNTLQP 310 (416) Q Consensus 237 ~~~~~~~v---l~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~-~lg~~~~~~~s~~e~--~~~~f~~~~l~P 310 (416) ..++...+ -.+...++|+....+-.-..+..+..+..|-.+|-+... ++-. +..-++++ ++..=....|.| T Consensus 323 ~pgg~~~~~~~~~~~~~~~pl~~~~~~~~~~~~i~~~~~rI~~af~~d~~~~~~~---~~~~TAtEV~~r~~E~~~~LGp 399 (549) T protein:vir:10 323 RSGALNWGGLNDKGEEMVKPLLTGKQAQIGIEFAQDTRQTINQWFYVTLFQILVD---SGDMTATEVLQRAQEKGVLLAP 399 (549) T ss_pred ccCCccccccCCCCccceeeeccccchhHHHHHHHHHHHHHHHHHhhhhhhhhcC---CCCccHHHHHHHHHHHHHHhhH Confidence 11222222 123356777765543333445567778889999977653 3222 22223333 222333344555 Q ss_pred HHHHHHHHH------------HHh-hcCchhcc---cccchhhhhh-hhhhccHHHHHHHHHHHHh-----CC------- Q lcl|Aclame:pro 311 WIVNFEQEL------------NVK-LFLDHDQK---SGHYVKFNID-SELRGDSKTQAEYLKTLHE-----TG------- 361 (416) Q Consensus 311 ~~~~i~~~l------------~~~-l~~~~~~~---~~~~~~f~~~-~l~~~d~~~~~~~~~~~~~-----~g------- 361 (416) ....+.+|| .+. .||+.... .+..+...+. .|-+.-.......+...++ ++ T Consensus 400 v~~rl~~E~l~Pli~R~~~il~r~g~lP~~p~~l~~~~~~~~i~yis~La~aq~~~~~~~i~~~~~~~~~laq~~Pe~ld 479 (549) T protein:vir:10 400 TLGRTQSELLGPMIAREVDILAEAGQLPDMPQELIDAGADVDVEYDSPLNKAMRAGEGAAILQWLQQLGIVSQFDPAAAK 479 (549) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhhcCCceeEEEeecHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHh Confidence 555554443 221 23322111 1222333322 2322212222222222211 01 Q ss_pred CcCHHHHH----HHhCCCCCCCCCeEeeccC-ccccccccccccccC----------CcccCCCCccCCC Q lcl|Aclame:pro 362 VLNKDEIR----ELLERNPIENGDKYISSLN-YVFLDFLEEYQRLKA----------GGAMKGGDNKNEG 416 (416) Q Consensus 362 ~~t~NE~R----~~~gl~p~~ggd~~~~~~n-~~~~~~~~~~~~~~~----------~~~~~gge~~~~~ 416 (416) .+..+++- +.+|.|+ + ++.+.. ...+-.....+++.. +...+.++.+.-. T Consensus 480 ~id~d~~~~~~a~~~Gvp~----~-~irs~eev~~~r~~~~~qqq~~~~~~~a~~a~~~a~~~~~~~ta~ 544 (549) T protein:vir:10 480 VPNGARIARLLADYGGVPV----E-AMSTDEELQAQQAAEAQAAQMQQMLAAAPVAAGAIKDLSDAQTAA 544 (549) T ss_pred cCCHHHHHHHHHHhcCCCc----c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCC Confidence 12222222 2234432 1 111110 000000000011000 0000111111111 No 256 >protein:vir:95014 Length: 491 # NCBI annotation: structural protein # Family: family:all:584 # MgeID: mge:1547 # MgeName: KS7 # Cross-refs: genbank:acc:YP_224035;genbank:gi:62327322;genbank:GeneID:5176842 Probab=28.81 E-value=1.7 Score=19.30 Aligned_cols=390 Identities=11% Similarity=0.026 Sum_probs=162.7 Q ss_pred Ccchhhhccccccccccccc------hhHHHhhhcCcccc----ccc-----cccH---H----HHhccHHHHHHHHHHH Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGF------NNILLNMFGGRKTA----SGE-----RVSE---S----NSLVQPDIFACVNVLS 58 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~------~~~~~~~~~~~~~~----~~~-----~~~~---~----~a~~~~~v~~~i~~ia 58 (416) |+--+ ++++..+....-+ ...+.+..+|..+. .+. .-+. . .|.-.+++...++.++ T Consensus 1 ~~~~~--~~~~~V~~~hp~y~a~~~~W~~ird~~~G~~~~~~r~~yl~~~~~~~~e~~Y~~rl~rA~~~n~~~~tl~~l~ 78 (491) T protein:vir:95 1 MLTAN--GQGSGVKTKHREWLHYAPKWQKVRHALAGDLVGYLRNVGLNEPDKAYGEARQAEYEAGGIVYNFTRRTLSGMV 78 (491) T ss_pred CcccC--CccCCCCccCHHHHHHHHHHHHHHHHhcCcchhhcccCCCcCCCCCCCHHHHHHHHhcccCCChHHHHHHHHh Confidence 55433 5554444332221 12334444442110 000 0111 1 1222445556666666 Q ss_pred HhhccCcceEEeecCCcceeeeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCc-----------E Q lcl|Aclame:pro 59 DDIAKLPIHTYKRTDGGIERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGY-----------P 127 (416) Q Consensus 59 ~~ia~~~~~~~~~~~~~~~~~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~-----------~ 127 (416) ..+.+-|..+- ....+..++-+---..-+-.+|.+.++...+.+|.+++++..+..+- - T Consensus 79 G~vfrk~p~~~----------~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~T~Ade~~~~~r 148 (491) T protein:vir:95 79 GSVMRKEPEIN----------IPKELEYLLKNADGSGVGLIQHAQDTLMEIDSVGRGGLLVDAPETAAATAAEQNAGLLN 148 (491) T ss_pred chhhcCCceee----------ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHcCeEEEEEecCCCcccCHHHHHHhcCC Confidence 66655555441 11123333333333556789999999999999999999998765542 0 Q ss_pred EEEEeeccceEEEE----------------------EcCCC---c---EEEEEE---------------eeCCeeEEech Q lcl|Aclame:pro 128 EALFPLRPDYTNAY----------------------VHPTT---G---MLWYQT---------------VLNGKAIELYD 164 (416) Q Consensus 128 ~~l~~l~p~~v~~~----------------------~~~~~---~---~~~~~~---------------~~~~~~~~~~~ 164 (416) -.+..+.|..|--+ .++.+ . ..|+.. ...++.+. .. T Consensus 149 Py~~~~~~~~IinW~~~~v~g~~~L~~v~l~E~~~~~d~~~~f~~~~~~qyRvL~l~~~g~~~~~v~r~~~~g~~~~-~~ 227 (491) T protein:vir:95 149 PTIAFYTTENIVNWRLTRVGSVNRVTMVVLRETWEYHEPGNEFETKYGEQYRVLDIDTDGNYRQRLFRFDAEGGAQE-EV 227 (491) T ss_pred cEEEEechhhhcCceeeeeCCceeeeEEEEEEeEEeecCCCCcccceEEEEEEEeecCCCceEEEEEEEcCCCccee-ee Confidence 12333333222100 01000 0 000000 00010000 00 Q ss_pred hheee-----------ec---cCCCCccccccHHHHHHHH-HHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHH Q lcl|Aclame:pro 165 YEVLH-----------FK---GLSTDGIHGKSPIGVVREH-IGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENV 229 (416) Q Consensus 165 ~~vih-----------~~---~~~~~~~~G~s~~~~~~~~-i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~ 229 (416) .+++| |. ....+...+.+|+..++.. +........ ....+...+.|-.+++.....+++..+.. T Consensus 228 ~~~~~~~g~~~l~~IPfv~~~~~~~~~~~~~pPLl~LA~lni~Hy~~ssd-~~~~l~~~~~P~l~~~G~d~~~~~~~~~~ 306 (491) T protein:vir:95 228 VEIYPDLGESLRGVIPFTFIGATNNDATIDDAPLLPLAELNIGHYRNSAD-NEESSFVVGQPTLFIYPGDNLTPQSFKEA 306 (491) T ss_pred eeeeecCCCcccCeeEEEEEecCCCCCCCCcCchHHHHHHHHHHhhhhhH-HHHHHHHcccceeeeecCcccCcchhhcc Confidence 11111 11 1112234577777665543 444444444 44455666678787776555554444322 Q ss_pred HHHHHHh-hcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHHHHHHHHHHH Q lcl|Aclame:pro 230 RKEWKRV-NKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTL 308 (416) Q Consensus 230 ~~~~~~~-~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~~~~f~~~~l 308 (416) .. .+. ..++..+.++.+.++.-+...+..+. .+.++....+. ...|. .++.- ...-.+.........-+..| T Consensus 307 ~~--~~i~~g~~~~~~lP~~~~~~~ie~~~~~~~-~~~l~~~e~qm-~~~Ga--~l~~~-~~~~Ta~~~~~~~~~~~S~L 379 (491) T protein:vir:95 307 NP--NGIKFGSRCGHNLGYGGSAQLIQAGENNLA-RQNMLDKEQQA-IQIGA--QLITP-SQQITAESARIQRGADTSVM 379 (491) T ss_pred Cc--ceeEecCcCCcCCCCCCccceeecCcchHH-HHHHHHHHHHH-HHHHH--HhccC-CcchhHHHHHHHHHHhhHHH Confidence 11 111 12344566777666555554443332 11111111111 11221 22221 11111222233445557778 Q ss_pred HHHHHHHHHHHHHhhc--Cchhc---ccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHh---CCCCCCCC Q lcl|Aclame:pro 309 QPWIVNFEQELNVKLF--LDHDQ---KSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELL---ERNPIENG 380 (416) Q Consensus 309 ~P~~~~i~~~l~~~l~--~~~~~---~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~---gl~p~~gg 380 (416) .-++.++++.+++.|- -.... .....|..+.+=....-......++.+++++|.++.-..++.+ |+.+.+.- T Consensus 380 ~~~a~~~e~al~~~l~~~a~w~G~~~~~~v~i~~n~dF~~~~~~~~~~~all~~~~~G~is~~t~~~~L~~~~vl~~~~e 459 (491) T protein:vir:95 380 ATIARNVSQAYTDALRWVAMMLGKPEDSEVEFQLNMDFFLQPMTAQDRAAWMADINAGLLPATAYYAALRKAGVTDWTDE 459 (491) T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCceEEEeecccccccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCCCCccHH Confidence 8888888888887631 11111 1112233333322222234456778888999999999988866 33322110 Q ss_pred CeEe-eccCccccccccccccccCCcccCCCCccCC Q lcl|Aclame:pro 381 DKYI-SSLNYVFLDFLEEYQRLKAGGAMKGGDNKNE 415 (416) Q Consensus 381 d~~~-~~~n~~~~~~~~~~~~~~~~~~~~gge~~~~ 415 (416) ++.- +...-.+++.... . .++-.+..+...| T Consensus 460 ~~~~~ie~~~~~~~~~~~-~---~~~~~~~~~~~~~ 491 (491) T protein:vir:95 460 DILNAIEDAPLPSGAVTQ-V---AGEIPQAAQQQQE 491 (491) T ss_pred HHHHHHHhcCCCCCcccc-c---cccchhhhhhccC Confidence 0000 0000000000000 0 0000000111111 No 257 >protein:vir:102668 Length: 547 # NCBI annotation: Hypothetical protein # Family: family:all:481 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024419;genbank:gi:48696640;genbank:GeneID:2948135 Probab=27.77 E-value=1.8 Score=19.17 Aligned_cols=359 Identities=7% Similarity=0.013 Sum_probs=165.1 Q ss_pred CcchhhhccccccccccccchhHH---HhhhcCcccc-----c-ccccc--HHHHhccHHHHHHHHHHHHhhcc------ Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNIL---LNMFGGRKTA-----S-GERVS--ESNSLVQPDIFACVNVLSDDIAK------ 63 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~-~~~~~--~~~a~~~~~v~~~i~~ia~~ia~------ 63 (416) |=-+++-++.+..+.....+...+ .++.-+.... . ....+ ...-.-.++-..|++.+|+.+.+ T Consensus 1 ~~~~~l~~r~~~l~~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~~~~~~~~~~i~dst~~~a~~~Las~L~~~ltPp~ 80 (547) T protein:vir:10 1 MENSKIVKRLDFLKTDRKNVEQIWDCIRKYIMPMRSDFFSDLRSEGSINWNQNREVFDSTAGDGLETLSSSLHGSLTSPA 80 (547) T ss_pred CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccccccCCCCCcccccccccccccchHHHHHHHHHHHHHHhhcCCC Confidence 655555554443333333332222 2222111100 0 00000 00111224445566666665542 Q ss_pred CcceEEeecCCc-ce-e-------eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecC-CCcEEEEEee Q lcl|Aclame:pro 64 LPIHTYKRTDGG-IE-R-------KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGS-HGYPEALFPL 133 (416) Q Consensus 64 ~~~~~~~~~~~~-~~-~-------~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~-~g~~~~l~~l 133 (416) -||-=....+.. .. . .+...+...| .+-| .+.-+..+..+++.+|++.+++..+. ......+..+ T Consensus 81 ~~WF~l~~~d~~~~~~~~v~~~L~~ve~~i~~~l-~~sn----f~~~~~~~~~~L~~~G~a~l~~~~d~~~~~~~r~~~~ 155 (547) T protein:vir:10 81 TKWFELAFRDKELNSDDECRKWLENATHDVYSAL-QDSN----FNLEANETYIDLCGYGNAIMVEEEDEDEEGSVVFQSS 155 (547) T ss_pred CcccccccCCccccchHHHHHHHHHHHHHHHHHH-HhcC----cHHHHHHHHHHHHhHCcEeEEeccCCCCCCceeEEEe Confidence 344322221111 00 0 0011122222 3333 33445566789999999999987653 2234445566 Q ss_pred ccceEEEEEcCCCcEEEEE--Eee-------------------------CCe---e------------------------ Q lcl|Aclame:pro 134 RPDYTNAYVHPTTGMLWYQ--TVL-------------------------NGK---A------------------------ 159 (416) Q Consensus 134 ~p~~v~~~~~~~~~~~~~~--~~~-------------------------~~~---~------------------------ 159 (416) +..++.+..+..|.+.... +.. .+. . T Consensus 156 pl~~~~v~~d~~G~v~~i~r~~~~t~~qi~~~fg~~~l~~~v~~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~ 235 (547) T protein:vir:10 156 PIQDSYFEEDSRGQVVNFYRVFRWTPAQIYDRFGDEGTPEAIIKKAKEASNQAALKQEVVMCVFTRYDKKQNRNAGTVLA 235 (547) T ss_pred ecceEEEeeCCCcCeeeeeeeeeccHHHHHHhcCcccCCHHHHHHHhcCCCcccceEEEEEEEeeccCCCCCccccceee Confidence 6667777777666532110 000 000 0 Q ss_pred --------EE--------------echhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeec Q lcl|Aclame:pro 160 --------IE--------------LYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILK 216 (416) Q Consensus 160 --------~~--------------~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~ 216 (416) +. |.....+.+|.... ...||.||...+...+.....+.+.......-...|.+.+. T Consensus 236 ~~~~p~~s~~~e~~~~~~~l~esg~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~pp~~v~ 315 (547) T protein:vir:10 236 PTERPFGKKWILKEGAVQLGEEGGYYEMPAYAIRWRKSAGSQWGFGPSHLALPDVLTANRYVELVLRSSEKVIDPAIMVT 315 (547) T ss_pred ccccceeEEEEEecCceeeeecCCcccCCeeeeeeeecCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc Confidence 00 00111223332222 34799999999999999999999998888888888888776 Q ss_pred cCCcCCHHHHHHHHHHHHHhhcCCceeecCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccH Q lcl|Aclame:pro 217 VPAFLDEKPKENVRKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNI 296 (416) Q Consensus 217 ~~~~~~~e~~~~~~~~~~~~~~~~~~~vl~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~ 296 (416) .++...+-. ...|++.+..+.-.+.|+...++-....+..+..+..|-.+|=+....+.. +..-++ T Consensus 316 ~~g~~~~~~-----------~~pgg~~~~~~~~~v~pl~~~~~~~~~~~~i~~~~~rI~~af~~d~~~~~~---~~~~TA 381 (547) T protein:vir:10 316 ERGLISDID-----------LGASGLTVVRDMESMKPFESRARFDVSSIQLTDLRSAVRRIYYVDQLQMKD---SPAMTA 381 (547) T ss_pred cccccccce-----------ecCCeeeecCCcccceeeecccchHHHHHHHHHHHHHHHHHhhhhhhhcCC---CccccH Confidence 555444211 124566666666777788766544444577778888899998776544332 222344 Q ss_pred HH--HHHHHHHHHHHHHHHHHHHHHHHhhcCchhcccccchhhhhhhhhhccHHHHHHHHHHHHhCCCcCHHHHHHHhCC Q lcl|Aclame:pro 297 EH--QSIEYVRNTLQPWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLER 374 (416) Q Consensus 297 e~--~~~~f~~~~l~P~~~~i~~~l~~~l~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl 374 (416) ++ ++..=....|.|....+++||-.-++.+ . +..+...|.+ T Consensus 382 tEV~~r~~E~~~~LG~v~~rl~~E~l~Pli~r---------~-----------------~~il~r~g~l----------- 424 (547) T protein:vir:10 382 TEVQVRYELMQRLLGPTLGRLENDFLSPMIQR---------T-----------------FNIRFRAGKL----------- 424 (547) T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH---------H-----------------HHHHHhcCCC----------- Confidence 33 3445556667888887777764322210 0 0112233332 Q ss_pred CCCCC------CCeEeeccCccccccccccccc-------cCCcccCC-----CCccCCC Q lcl|Aclame:pro 375 NPIEN------GDKYISSLNYVFLDFLEEYQRL-------KAGGAMKG-----GDNKNEG 416 (416) Q Consensus 375 ~p~~g------gd~~~~~~n~~~~~~~~~~~~~-------~~~~~~~g-----ge~~~~~ 416 (416) ||.|. +..+-+. -..++...-..... ..-...-+ .+.=|=. T Consensus 425 P~~p~~l~~~~~~~~~v~-~is~Laraq~~~~~~~i~~~~~~v~~laq~~P~vld~id~d 483 (547) T protein:vir:10 425 GELPSKLLESGKAAMDIV-YTGPLSRAQKIDQAASIERWAGSTAQLAEINPEVLDIPDWD 483 (547) T ss_pred CCCchhhhccCcceEEEE-eccHHHHHHHHHHHHHHHHHHHHHHHhhccChhhhhcCCHH Confidence 22221 1111111 00111111000000 00000000 0000000 No 258 >protein:vir:2198 Length: 536 # NCBI annotation: head-tail connector protein # Family: family:all:481 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_041995;swissprot:sw:p03728;genbank:gi:9627467;goa:P03728;uniprot:P03728;genbank:GeneID:1261033 Probab=24.23 E-value=2.2 Score=18.70 Aligned_cols=392 Identities=8% Similarity=-0.014 Sum_probs=147.3 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccC-----cceEEeecCCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKL-----PIHTYKRTDGG 75 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~-----~~~~~~~~~~~ 75 (416) --|+++...|+.....-.-...+................ ....+ .++.-.|++.+|+.+.+. ||-=....+.. T Consensus 15 ~r~~~lk~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~-~~~~~-dst~~~a~~~Laa~l~~~ltP~~~WFrl~~~d~~ 92 (536) T protein:vir:21 15 SVYERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTD-YQTPW-QAVGARGLNNLASKLMLALFPMQTWMRLTISEYE 92 (536) T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhcccccCCCCCccccc-ccccc-cccHHHHHHHHHHHHHHhhcCCCcccccccChhh Confidence 222222222221111100011111111111111111000 01112 233344555555544331 33222211111 Q ss_pred ceee----------------eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEE Q lcl|Aclame:pro 76 IERK----------------PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTN 139 (416) Q Consensus 76 ~~~~----------------~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~ 139 (416) -... ++..+. ..+.+-| .+.-+..+..+++.+||+..++..+..+.+..+..++..++. T Consensus 93 ~~~~~~~~~~~~~v~~~L~~ve~~~~-~~l~~sn----f~~~~~~~~~~L~~~G~a~ly~~e~~~~~~~~f~~~pl~~~~ 167 (536) T protein:vir:21 93 AKQLLSDPDGLAKVDEGLSMVERIIM-NYIESNS----YRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMKLYRLSSYV 167 (536) T ss_pred hhccccchhhHHHHHHHHHHHHHHHH-HHHHhcC----cHHHHHHHHHHHHhHCcEeEEEeeCCCCceeeEEEEEcCeEE Confidence 0000 011122 2223333 344455667788889999999876654444333333335666 Q ss_pred EEEcCCCcEEEEE--E-----------------------------------e-eCCeeE---------E---------ec Q lcl|Aclame:pro 140 AYVHPTTGMLWYQ--T-----------------------------------V-LNGKAI---------E---------LY 163 (416) Q Consensus 140 ~~~~~~~~~~~~~--~-----------------------------------~-~~~~~~---------~---------~~ 163 (416) +..+..|.+.... + . .++..+ . +. T Consensus 168 v~~d~~G~vd~i~r~~~~t~~~l~~~fg~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~e~~g~~v~~~~g~~~f~ 247 (536) T protein:vir:21 168 VQRDAFGNVLQMVTRDQIAFGALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEDSGEYLRYEEVEGMEVQGSDGTYPKE 247 (536) T ss_pred EeeCCCCCeeEEeeeeeccHHHHHHhhhhhhcccccccccccceeEEEEEEEecCCCcEEEEeccCCeeeccccCccccc Confidence 6666655432110 0 0 000000 0 01 Q ss_pred hhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCC-c Q lcl|Aclame:pro 164 DYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVE-N 241 (416) Q Consensus 164 ~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~-~ 241 (416) ....+.+|.... ...||.||...+...+.....+.+.......-...|...+..++...++... .++ + T Consensus 248 ~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~~~----------~~~~g 317 (536) T protein:vir:21 248 ACPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRLT----------KAQTG 317 (536) T ss_pred cCCeeeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCcccccchhhhc----------cCCCc Confidence 112333443322 3479999999999999999999888887777767777766665554433221 111 1 Q ss_pred eee--cCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH--HH------------HHHH Q lcl|Aclame:pro 242 IAI--IDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ--SI------------EYVR 305 (416) Q Consensus 242 ~~v--l~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~--~~------------~f~~ 305 (416) .++ ..+.+...++....+-....+..+..+..|..+|-+.. +... ++..-+.++. +. .+.. T Consensus 318 ~~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~rI~~af~~~~--l~~~-~~~r~TAtEV~~r~~E~~~~LG~v~~rl~~ 394 (536) T protein:vir:21 318 DFVTGRPEDISFLQLEKQADFTVAKAVSDAIEARLSFAFMLNS--AVQR-TGERVTAEEIRYVASELEDTLGGVYSILSQ 394 (536) T ss_pred ceecCCcccceeeeccccccchHHHHHHHHHHHHHHHHHhhhh--cccC-CCCCccHHHHHHHHHHHHHHhhHHHHHHHH Confidence 122 23444555665544444455666777888888885432 2211 2222233332 22 2344 Q ss_pred HHHHHHHHHHHHHHHHh-hcCchhcccccchhh--hhhhhhhc-cHHHHHHHHHHHHhCC------CcCHHHHHH----H Q lcl|Aclame:pro 306 NTLQPWIVNFEQELNVK-LFLDHDQKSGHYVKF--NIDSELRG-DSKTQAEYLKTLHETG------VLNKDEIRE----L 371 (416) Q Consensus 306 ~~l~P~~~~i~~~l~~~-l~~~~~~~~~~~~~f--~~~~l~~~-d~~~~~~~~~~~~~~g------~~t~NE~R~----~ 371 (416) .-+.|++...-..+.+. +|++.... ...+.+ -+..+.+. +.+....++..+.+.+ .+..+++-+ . T Consensus 395 Ell~Pli~r~~~il~r~g~lP~~p~~-~v~~~~vs~l~~l~r~~~~~~l~~~~~~la~~~Pe~ld~~id~d~~~~~~a~~ 473 (536) T protein:vir:21 395 ELQLPLVRVLLKQLQATQQIPELPKE-AVEPTISTGLEAIGRGQDLDKLERCVTAWAALAPMRDDPDINLAMIKLRIANA 473 (536) T ss_pred HHHHHHHHHHHHHHHhCCCCCCCChh-hccceEEecHHHHHHHHHHHHHHHHHHHHHhhchhhhcccCCHHHHHHHHHHH Confidence 44455554433333222 33322111 111111 11122111 1111112222111111 122222222 2 Q ss_pred hCCCCCCCCCeEeeccCccccccc-ccccc---------------ccCCcccCCCCccCCC Q lcl|Aclame:pro 372 LERNPIENGDKYISSLNYVFLDFL-EEYQR---------------LKAGGAMKGGDNKNEG 416 (416) Q Consensus 372 ~gl~p~~ggd~~~~~~n~~~~~~~-~~~~~---------------~~~~~~~~gge~~~~~ 416 (416) +|.+|. ..+..+-....+-.. ...++ ...+...-++--+..| T Consensus 474 ~Gv~p~---~~irt~eev~~~r~q~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g 531 (536) T protein:vir:21 474 IGIDTS---GILLTEEQKQQKMAQQSMQMGMDNGAAALAQGMAAQATASPEAMAAAADSVG 531 (536) T ss_pred cCCChh---hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhHHhhhhccc Confidence 344221 000000000000000 00000 0000000011122222 No 259 >protein:vir:3361 Length: 535 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523332;genbank:gi:17570823;genbank:GeneID:927409 Probab=21.61 E-value=2.6 Score=18.33 Aligned_cols=384 Identities=8% Similarity=-0.030 Sum_probs=150.7 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCc----c-ccccccccHHHHhccHHHHHHHHHHHHhhcc-----CcceEEe Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGR----K-TASGERVSESNSLVQPDIFACVNVLSDDIAK-----LPIHTYK 70 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~-----~~~~~~~ 70 (416) --|+++...|+... ..|. .+..+.-+. . ....... ...+ .++.-.|++.+|+.+.+ -||--.. T Consensus 16 ~r~~~l~~~R~~~e---~~w~-e~~~~~lP~~~~~~~~~~~~~~--~~~~-dst~~~a~~~Laa~l~~~ltP~~~WF~l~ 88 (535) T protein:vir:33 16 ATYDRLTNDRRAYE---TRAE-NCAQYTIPSLFPKESDNESTDY--TTPW-QAVGARGLNNLASKLMLALFPMQSWMKLT 88 (535) T ss_pred HHHHHHHHHhhHHH---HHHH-HHHHHhcccccCCCCCcccccc--cccc-cccHHHHHHHHHHHHHHhhcCCCcccccc Confidence 12233222222211 1111 111111111 0 0001000 0111 33334566666655543 1332111 Q ss_pred ecCCccee----------------eeccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeec Q lcl|Aclame:pro 71 RTDGGIER----------------KPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLR 134 (416) Q Consensus 71 ~~~~~~~~----------------~~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~ 134 (416) ..+....+ .++..+... +.+-| .+.-+..+..+++.+|++.+++..+. +....+..++ T Consensus 89 ~~d~~~~~~~~~~~~~~~v~~~l~~ve~~~~~~-~~~sn----f~~~~~~~~~~L~~~G~a~l~~~~~~-~~~~~f~~~p 162 (535) T protein:vir:33 89 ISEYEAKQLVGDPDGLAKVDEGLSMVERIIMNY-IESNS----YRVTLFECLKQLIVAGNALLYLPEPE-GSYNPMKLYR 162 (535) T ss_pred cChHHHhccccCcchHHHHHHHHHHHHHHHHHH-HHhcC----cHHHHHHHHHHHHhhCceeEEeecCC-CCceeeEEEE Confidence 11100000 000111111 23333 44455566788889999999987654 3333333344 Q ss_pred cceEEEEEcCCCcEEE--EEEe------------------------------------eCCeeEE--------------- Q lcl|Aclame:pro 135 PDYTNAYVHPTTGMLW--YQTV------------------------------------LNGKAIE--------------- 161 (416) Q Consensus 135 p~~v~~~~~~~~~~~~--~~~~------------------------------------~~~~~~~--------------- 161 (416) -.++.+..+..|.+.. ..+. ..+..+. T Consensus 163 l~~~~v~~d~~G~vd~i~r~~~~t~~ql~~~~~~~~~~~~~~k~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (535) T protein:vir:33 163 LSSYVVQRDAYGNVLQIVTRDQIAFGALPEDVRSAVEKSGGEKKMDEMVDVYTHVYLDEESGDYLKYEEVEDVEIDGSDA 242 (535) T ss_pred cCeeEEeeCCCCCeeEEEeeEeecHHHHHHHhhhhhcccccccccccCCeEEEEEEeeCCCCcEEEEEEEeCcccccccc Confidence 4566666666554321 0000 0000000 Q ss_pred ---echhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhh Q lcl|Aclame:pro 162 ---LYDYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVN 237 (416) Q Consensus 162 ---~~~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~ 237 (416) +.....+..|.... ...||.||...+...+.....+.+.......-...|.+++..++...+.... T Consensus 243 ~~~~~~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~lv~~~g~~~~~~~~---------- 312 (535) T protein:vir:33 243 TYPTDAMPYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNPAGITQPRRLT---------- 312 (535) T ss_pred ccccccCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccccchhhcc---------- Confidence 01112333343322 3479999999999999999999999999999998998887766655543321 Q ss_pred cCC-ceee--cCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH--HH----------- Q lcl|Aclame:pro 238 KVE-NIAI--IDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ--SI----------- 301 (416) Q Consensus 238 ~~~-~~~v--l~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~--~~----------- 301 (416) .++ +.++ -++++...++....+-....+..+..+..|..+|=+. .+...+ +..-++++. +. T Consensus 313 ~~~~g~~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~~I~~af~~~--~~~~~~-~~r~TAtEV~~r~~E~~~~LG~v~ 389 (535) T protein:vir:33 313 KAQTGDFVPGRREDIDFLQLEKQADFTVAKAVSDQIEARLSYAFMLN--SAVQRT-GERVTAEEIRYVASELEDTLGGVY 389 (535) T ss_pred cCCceeeecCCcccceeeecccccchhHHHHHHHHHHHHHHHHHhhh--hcccCC-CccccHHHHHHHHHHHHHHHhHHH Confidence 122 2222 2345555555554444445566677788888888443 222122 222233332 22 Q ss_pred -HHHHHHHHHHHHHHHHHHHHh-hcCchhcccccchhhhhhhhhhccH----HHHHHHHHHHHhC-----C-CcCHHHH- Q lcl|Aclame:pro 302 -EYVRNTLQPWIVNFEQELNVK-LFLDHDQKSGHYVKFNIDSELRGDS----KTQAEYLKTLHET-----G-VLNKDEI- 368 (416) Q Consensus 302 -~f~~~~l~P~~~~i~~~l~~~-l~~~~~~~~~~~~~f~~~~l~~~d~----~~~~~~~~~~~~~-----g-~~t~NE~- 368 (416) .+-..-+.|++...-..+.+. +|++... ....+++ .+.|-..-. +.....+..+... . .+..+++ T Consensus 390 ~rl~~Ell~Pli~r~~~il~r~g~lP~~p~-~~v~~~y-is~La~aqr~~~~~~l~~~~~~la~~~P~~~d~~id~d~~~ 467 (535) T protein:vir:33 390 SILSQELQLPLVRVLLKQLQATSQIPELPK-EAVEPTI-STGLEAIGRGQDLDKLERCISAWAALAPMQGDPDINLAVIK 467 (535) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCc-cceeEEE-ecHHHHHHHHHHHHHHHHHHHHHHhhChhhhhccCCHHHHH Confidence 244444555554444444333 3333221 1222332 122211111 1111111111110 0 1112221 Q ss_pred ---HHHhCCCCCCCCCeEeecc-Ccccccccc--ccccccCCcc--------cCCCCccCCC Q lcl|Aclame:pro 369 ---RELLERNPIENGDKYISSL-NYVFLDFLE--EYQRLKAGGA--------MKGGDNKNEG 416 (416) Q Consensus 369 ---R~~~gl~p~~ggd~~~~~~-n~~~~~~~~--~~~~~~~~~~--------~~gge~~~~~ 416 (416) .+.+|.|+. .++-+. ....+-... ..++++.-.+ ..+|-.+-+| T Consensus 468 ~~~a~~~Gvp~~----~i~~~~ee~~~~~~q~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 525 (535) T protein:vir:33 468 LRIANAIGIDTS----GILLTDEQKQALMMQDAAQTGVENAAAAGGAGVGALATSSPEAMQG 525 (535) T ss_pred HHHHHHcCCCHh----HhcCCHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhhcCChhHHH Confidence 122344321 001000 000000000 0000000000 0001000011 No 260 >protein:vir:10447 Length: 536 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848294;genbank:gi:30387485;genbank:GeneID:1733984 Probab=20.30 E-value=2.8 Score=18.14 Aligned_cols=392 Identities=8% Similarity=-0.013 Sum_probs=147.5 Q ss_pred CcchhhhccccccccccccchhHHHhhhcCccccccccccHHHHhccHHHHHHHHHHHHhhccC-----cceEEeecCCc Q lcl|Aclame:pro 1 MLLERMFEKRSGSSDHEDGFNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKL-----PIHTYKRTDGG 75 (416) Q Consensus 1 m~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~~~i~~ia~~ia~~-----~~~~~~~~~~~ 75 (416) --|+++...|+.....-.-...+................ ..... .++.-.|++.+|+.+.+. ||--....+.. T Consensus 15 ~r~~~l~~~R~~~e~~w~e~~~~~lP~~~~~~~~~~~~~-~~~~~-dst~~~a~~~Laa~l~~~ltP~~~WFrl~~~d~~ 92 (536) T protein:vir:10 15 SVYERLKNDRAPYETRAQNCAQYTIPSLFPKDSDNASTD-YQTPW-QAVGARGLNNLASKLMLALFPMQTWMRLTISEYE 92 (536) T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhcccccCCCCCccccc-ccccc-cccHHHHHHHHHHHHHhhhcCCCcccccccChhh Confidence 222222222221111100011111111111111111100 01112 223344555555554331 33222211111 Q ss_pred ceee----------------eccchhhhhccccccccCHHHHHHHHHHHHHHcCCeEEEEeecCCCcEEEEEeeccceEE Q lcl|Aclame:pro 76 IERK----------------PEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTN 139 (416) Q Consensus 76 ~~~~----------------~~~~~~~~l~~~PN~~~s~~~f~~~~~~~~l~~G~~~~~i~r~~~g~~~~l~~l~p~~v~ 139 (416) -... ++..+.. .+.+-| .+.-+..+..+++.+||+..++..+..+.+..+..++..++. T Consensus 93 ~~~~~~~~~~~~~v~~~L~~ve~~~~~-~l~~sn----f~~~~~~~~~~L~~~G~a~ly~~e~~~~~~~~~~~~pl~~~~ 167 (536) T protein:vir:10 93 AKQLLSDPDGLAKVDEGLSMVERIIMN-YIESNS----YRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMKLYRLSSYV 167 (536) T ss_pred hhccccchhhHHHHHHHHHHHHHHHHH-HHHhcC----cHHHHHHHHHHHHhHCcEeEEEeeCCCCceeeEEEEEcCeEE Confidence 0000 0111222 223333 344455667788889999999876654444333333335666 Q ss_pred EEEcCCCcEEEEE--E-----------------------------------ee-CCeeE----E--------------ec Q lcl|Aclame:pro 140 AYVHPTTGMLWYQ--T-----------------------------------VL-NGKAI----E--------------LY 163 (416) Q Consensus 140 ~~~~~~~~~~~~~--~-----------------------------------~~-~~~~~----~--------------~~ 163 (416) +..+..|.+.... + .. .+..+ . +. T Consensus 168 v~~d~~G~vd~i~r~~~~t~~~l~~~fg~~~~~~~~~~~~~~~v~v~~~V~~~~~~~~~~~~~e~~g~~v~~~~g~~~f~ 247 (536) T protein:vir:10 168 VQRDAFGNVLQMVTRDQIAFGALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEASGEYLRYEEVEGMEVQGSDGTYPKE 247 (536) T ss_pred EeeCCCCCeeEEeeeeeccHHHHHHhhhhhhcccccccCcccceEEEEEEEEecCCCcEEEEEeecCccccccccccccc Confidence 6666665432110 0 00 00000 0 01 Q ss_pred hhheeeeccCCC-CccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeeccCCcCCHHHHHHHHHHHHHhhcCC-c Q lcl|Aclame:pro 164 DYEVLHFKGLST-DGIHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEKPKENVRKEWKRVNKVE-N 241 (416) Q Consensus 164 ~~~vih~~~~~~-~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~~~~-~ 241 (416) ....+.+|.... ...||.||...+...+.....+.+.......-...|...+..++...++... .++ + T Consensus 248 ~~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p~g~~~~~~~~----------~~~~g 317 (536) T protein:vir:10 248 ACPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRLT----------KAQTG 317 (536) T ss_pred cCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCcccccchhhhc----------cCCCc Confidence 112233443322 3479999999999999999999888887777767777776665554433221 111 1 Q ss_pred eee--cCCCceeEeccCChhhHHHHHHHHHHHHHHHHHhccchhhcccccCCCcccHHHH--HHH------------HHH Q lcl|Aclame:pro 242 IAI--IDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQ--SIE------------YVR 305 (416) Q Consensus 242 ~~v--l~~g~~~~~~~~~~~d~~~~e~~~~~~~~Ia~~~gvp~~~lg~~~~~~~s~~e~~--~~~------------f~~ 305 (416) .++ ..+.+...++....+-....+..+..+..|..+|-+.. +... ++..-++++. +.. +.. T Consensus 318 ~~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~rI~~af~~~~--l~~~-~~~r~TAtEV~~r~~E~~~~LG~v~~rl~~ 394 (536) T protein:vir:10 318 DFVTGRPEDISFLQLEKQADFTVAKAVSDAIEARLSFAFMLNS--AVQR-TGERVTAEEIRYVASELEDTLGGVYSILSQ 394 (536) T ss_pred ceecCCcccceeeeccccccchHHHHHHHHHHHHHHHHHhhhh--cccC-CCCCccHHHHHHHHHHHHHHhhHHHHHHHH Confidence 122 23444555665544444455666777888888885432 2211 2222233332 222 344 Q ss_pred HHHHHHHHHHHHHHHHh-hcCchhcccccchhh--hhhhhhhc-cHHHHHHHHHHHHhCC------CcCHHHHHH----H Q lcl|Aclame:pro 306 NTLQPWIVNFEQELNVK-LFLDHDQKSGHYVKF--NIDSELRG-DSKTQAEYLKTLHETG------VLNKDEIRE----L 371 (416) Q Consensus 306 ~~l~P~~~~i~~~l~~~-l~~~~~~~~~~~~~f--~~~~l~~~-d~~~~~~~~~~~~~~g------~~t~NE~R~----~ 371 (416) .-+.|++...-..+.+. +|++.... ...+.+ -+..+.+. +.+....++..+.+.+ .+..+++-+ . T Consensus 395 Ell~Pli~r~~~il~r~g~lP~~p~~-~v~~~~vs~l~~l~r~~~~~~l~~~~~~la~~~P~~ld~~id~d~~~~~~a~~ 473 (536) T protein:vir:10 395 ELQLPLVRVLLKQLQATQQIPELPKE-AVEPTISTGLEAIGRGQDLDKLERCVTAWAALAPMRDDPDINLAMIKLRIANA 473 (536) T ss_pred HHHHHHHHHHHHHHHhCCCCCCCChh-hccceEEecHHHHHHHHHHHHHHHHHHHHHhhchhhhcccCCHHHHHHHHHHH Confidence 44455544433333222 33322111 111111 11122111 1111112222111110 122222222 2 Q ss_pred hCCCCCCCCCeEeeccCccccccc-ccccc---------------ccCCcccCCCCccCCC Q lcl|Aclame:pro 372 LERNPIENGDKYISSLNYVFLDFL-EEYQR---------------LKAGGAMKGGDNKNEG 416 (416) Q Consensus 372 ~gl~p~~ggd~~~~~~n~~~~~~~-~~~~~---------------~~~~~~~~gge~~~~~ 416 (416) +|.+|. ..+..+-....+-.. ...++ ...+...-++--+..| T Consensus 474 ~Gv~p~---~~irt~eev~~~r~q~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g 531 (536) T protein:vir:10 474 IGIDTS---GILLTEEQKQQKMAQQSMQMGMDNGAAALAQGMAAQATASPEAMAAAADSVG 531 (536) T ss_pred cCCCch---hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHhhhhccc Confidence 344221 000000000000000 00000 0000000011122222 Done!