Query lcl|Aclame:protein:vir:274|NCBI_annot:putative tail completion protein|genbank:acc:NP_536654;genbank:gi:17975132;genbank:GeneID:929088 Match_columns 166 No_of_seqs 123 out of 235 Neff 6.2 Searched_HMMs 1612 Date Sat Nov 30 03:42:09 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_27 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_27_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:274 Length: 166 # 100.0 4.2E-62 2.6E-65 357.1 16.1 166 1-166 1-166 (166) 2 protein:vir:3750 Length: 227 # 100.0 1.6E-52 9.8E-56 304.6 14.2 161 1-166 2-166 (227) 3 protein:vir:98860 Length: 230 100.0 2.1E-52 1.3E-55 303.9 13.4 163 1-166 4-170 (230) 4 protein:vir:78755 Length: 228 100.0 1.3E-51 8.1E-55 299.5 13.7 159 1-166 1-164 (228) 5 protein:vir:3787 Length: 231 # 100.0 8.2E-51 5.1E-54 295.2 14.9 162 1-166 2-171 (231) 6 protein:vir:2026 Length: 150 # 99.9 5.4E-27 3.3E-30 164.6 10.6 139 6-148 1-150 (150) 7 protein:vir:6071 Length: 150 # 99.9 5.7E-27 3.5E-30 164.5 10.1 139 6-148 1-150 (150) 8 protein:vir:100312 Length: 152 99.9 7.1E-27 4.4E-30 164.0 9.8 139 1-147 1-152 (152) 9 protein:vir:1164 Length: 156 # 99.9 9.9E-27 6.1E-30 163.2 10.1 145 1-159 1-156 (156) 10 protein:vir:5703 Length: 150 # 99.9 9.9E-27 6.1E-30 163.1 10.0 139 6-148 1-150 (150) 11 protein:vir:79115 Length: 148 99.9 1.1E-26 6.7E-30 162.9 10.2 140 6-150 1-148 (148) 12 protein:vir:79179 Length: 155 99.9 3.5E-26 2.2E-29 160.1 10.7 139 1-148 1-155 (155) 13 protein:vir:98557 Length: 149 99.9 4.2E-26 2.6E-29 159.7 10.8 140 6-149 1-149 (149) 14 protein:vir:1838 Length: 149 # 99.9 5E-26 3.1E-29 159.3 10.9 139 6-148 1-149 (149) 15 protein:vir:99833 Length: 190 99.6 1.2E-17 7.2E-21 113.4 9.0 146 1-166 1-169 (190) 16 protein:vir:1988 Length: 156 # 99.5 2.7E-17 1.7E-20 111.4 7.6 133 1-146 4-156 (156) 17 protein:vir:107851 Length: 175 99.4 8.4E-16 5.2E-19 103.2 9.6 138 1-147 4-175 (175) 18 protein:vir:79091 Length: 175 99.3 3.3E-14 2.1E-17 94.5 10.0 138 1-147 4-175 (175) 19 protein:vir:99196 Length: 155 99.2 5.6E-14 3.5E-17 93.2 9.4 137 1-151 4-155 (155) 20 protein:vir:79225 Length: 155 99.1 6.5E-13 4.1E-16 87.4 9.4 138 1-151 4-155 (155) 21 protein:vir:103841 Length: 155 98.9 9.6E-12 6E-15 81.0 9.0 136 1-151 4-155 (155) 22 protein:vir:3163 Length: 145 # 98.7 1.6E-10 9.9E-14 74.3 8.6 128 1-148 1-145 (145) 23 protein:vir:1386 Length: 149 # 59.1 0.085 5.3E-05 26.5 3.3 128 1-144 1-149 (149) 24 protein:vir:93617 Length: 148 58.0 0.062 3.8E-05 27.2 2.4 130 1-149 1-148 (148) 25 protein:vir:96105 Length: 193 49.9 0.17 0.0001 24.8 3.4 96 58-166 1-118 (193) 26 protein:vir:3873 Length: 128 # 24.6 2.2 0.0013 18.8 7.6 126 4-144 1-128 (128) 27 protein:vir:97088 Length: 157 24.6 1.8 0.0011 19.1 4.7 127 2-152 1-157 (157) 28 protein:vir:194 Length: 149 # 21.6 1.3 0.0008 20.0 3.3 138 1-156 1-149 (149) No 1 >protein:vir:274 Length: 166 # NCBI annotation: putative tail completion protein # Family: family:all:743 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536654;genbank:gi:17975132;genbank:GeneID:929088 Probab=100.00 E-value=4.2e-62 Score=357.09 Aligned_cols=166 Identities=100% Similarity=1.432 Sum_probs=164.3 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccccchhhhhhHHhhhhhhc Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKRGRGKLLKGFTQKLKHFQ 80 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~~k~kMl~~l~~~~~~~~ 80 (166) ||+|++|+.++++++++|++++|||++|++||++||++|++++++||++|+|||||||+|||++++|||++|.+.++++. T Consensus 1 m~~~~~~~~q~~~l~~~L~ll~L~p~~Rr~ll~~iak~lr~~~~~rIr~Q~~PDGs~~~pRKr~k~KMl~~l~k~~~~~~ 80 (166) T protein:vir:27 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKRGRGKLLKGFTQKLKHFQ 80 (166) T ss_pred CeeeccChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCchhhhhhHHHHHhhHHHhhhhc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhccccccCCCCCCccCccc Q lcl|Aclame:pro 81 RDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISITASSLRGDRKEAKSPLW 160 (166) Q Consensus 81 ~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy~~~~~~~~k~~k~p~~ 160 (166) .+++++++|||+|.+|+||+|||||++++|+++++.+.|+.++.|++++|||++||++|+++||....+|+++.+++|+| T Consensus 81 ~~~~~~~~v~~~g~~~rIA~vHq~G~~~~~~~~~~~~~~~~~~~~~~~~pATr~QAk~Lr~~~~~~~~~g~~k~~k~pt~ 160 (166) T protein:vir:27 81 RDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISITASSLRGDRKEAKSPLW 160 (166) T ss_pred cCCCCeEEEEecCchhhhhhhhhcCcccccccchhhHHHhhccCCCCCccCCHHHHHHHHHhcCcccccCCCCCCCCCCc Confidence 99999999999999999999999999999999999999999999999999999999999999888899999999999999 Q ss_pred cccccC Q lcl|Aclame:pro 161 HGYEKT 166 (166) Q Consensus 161 ~~~~~~ 166 (166) ||||+| T Consensus 161 ~~~~~~ 166 (166) T protein:vir:27 161 HGYEKT 166 (166) T ss_pred CccccC Confidence 999999 No 2 >protein:vir:3750 Length: 227 # NCBI annotation: hypothetical protein # Family: family:all:743 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043491;genbank:gi:9628626;genbank:GeneID:1261131 Probab=100.00 E-value=1.6e-52 Score=304.58 Aligned_cols=161 Identities=20% Similarity=0.302 Sum_probs=144.8 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccccchhhhhhHHhhhhhhc Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKRGRGKLLKGFTQKLKHFQ 80 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~~k~kMl~~l~~~~~~~~ 80 (166) -|+|++|..+++.+.++|++++|||++|++|+++||++|++++++||++|+||||+||+|||++++|||++|++.+.+.. T Consensus 2 ~i~~~~n~~~~~~l~~~L~ll~L~p~~Rr~ll~~iak~lr~~~k~rIr~Q~~PDGs~~~pRKr~k~KM~~kL~k~l~~~~ 81 (227) T protein:vir:37 2 NIRMGIDKEDLKKFLKDLEIISLPDKKKREILIRSLQMIKRQAVKSAANQRNPMGGSWKKRKNGTAKMLRRIAKLANSKA 81 (227) T ss_pred cccccCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCchhcchhHHHHhhhHHHcceee Confidence 57999999999999999999999999999999999999999999999999999999999999999999999998877764 Q ss_pred ccCCCeEEEEe-CccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhcccccc---CCCCCCcc Q lcl|Aclame:pro 81 RDNNRTLVVGW-PSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISITASSL---RGDRKEAK 156 (166) Q Consensus 81 ~~~~~~~~v~~-~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy~~~~---~~~~k~~k 156 (166) +++.++|+| +|++|+||+|||||++++|++.... ...+.|++++|||++||++|++|||+++. +++++.++ T Consensus 82 --~~~~a~v~f~~g~~~~IA~vHq~G~~~~v~~~~~~---~~~~~~~~~~paTr~QAk~Lr~lGy~v~~~k~k~~k~~~r 156 (227) T protein:vir:37 82 --EKAQGTLFYKQKRTGEIAQEHQEGIPHLFKKTEFT---GKNKGGIGADPCTLRQAKKLKDLGYTVANGKTKNGKAKRR 156 (227) T ss_pred --cccceEEEecCcchHHHHHHhhcCcccccchhhhh---hhhcCCccccCCCHHHHHHHHHhcccccCCCCCCcCCccc Confidence 334445555 7999999999999999999876544 55778999999999999999999999875 45567789 Q ss_pred CccccccccC Q lcl|Aclame:pro 157 SPLWHGYEKT 166 (166) Q Consensus 157 ~p~~~~~~~~ 166 (166) +|.-.+|+++ T Consensus 157 kps~kwI~~n 166 (227) T protein:vir:37 157 KPTLSEIRST 166 (227) T ss_pred cCCHHHHHHh Confidence 9999999999 No 3 >protein:vir:98860 Length: 230 # NCBI annotation: hypothetical protein # Family: family:all:743 # MgeID: mge:1495 # MgeName: F108 # Cross-refs: genbank:acc:YP_654736;genbank:gi:109302921;genbank:GeneID:4156065 Probab=100.00 E-value=2.1e-52 Score=303.87 Aligned_cols=163 Identities=24% Similarity=0.305 Sum_probs=151.3 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccccchhhhhhHHhhhhhhc Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKRGRGKLLKGFTQKLKHFQ 80 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~~k~kMl~~l~~~~~~~~ 80 (166) =|++++|..+++++.++|++++|||++|++||++||++|++++++||++|+||||+||+|||++++|||++|++.+.+.. T Consensus 4 ~i~~~ln~~~~~~l~~~L~ll~L~p~kRrrll~~iak~lr~~~k~rIr~Q~~PDGs~w~pRKr~k~KMl~~L~k~l~~~~ 83 (230) T protein:vir:98 4 AIKMGVNPDDLRDFLKDLELLKIPPKKKKEILIRTLQEMKKRSVKSASNQRTPTGSGWKPRKNGNAKMLRRIAKTLKFTS 83 (230) T ss_pred cCcccCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhhhhhhHHHHhhhHHHHHHhh Confidence 58889999999999999999999999999999999999999999999999999999999999999999999999999998 Q ss_pred cc-CCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhcccccc---CCCCCCcc Q lcl|Aclame:pro 81 RD-NNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISITASSL---RGDRKEAK 156 (166) Q Consensus 81 ~~-~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy~~~~---~~~~k~~k 156 (166) .+ +.+++++||++.+++||+|||||+++++++.... ...+.|++++|||++||++|++|||+++. +++++.++ T Consensus 84 ~~~~~~~v~~~~~~~~~rIA~vHq~G~~~~~~~~~~~---~r~~~~~~~~paTr~QAk~Lr~lGy~v~~g~~~~~~k~~k 160 (230) T protein:vir:98 84 ADREIKRVCTISRNAQRRSQKEHQRGAKITNLKSVIL---RKSRAGTAKDPATMRQAKKLRDLGYTVPNGTTKSGKKRYR 160 (230) T ss_pred cccccceeeeecccchhhhhhhhhccchhhhhhhhhh---hhhcCCCCcccccHHHHHHHHHcCCccCCCCCCcCCCCCC Confidence 76 4567778999999999999999999999775443 45678999999999999999999999886 67789999 Q ss_pred CccccccccC Q lcl|Aclame:pro 157 SPLWHGYEKT 166 (166) Q Consensus 157 ~p~~~~~~~~ 166 (166) +|.-.+|+++ T Consensus 161 kps~kwI~~n 170 (230) T protein:vir:98 161 RPSAREIVAT 170 (230) T ss_pred CCCHHHHHHh Confidence 9999999999 No 4 >protein:vir:78755 Length: 228 # NCBI annotation: putative tail completion protein # Family: family:all:743 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285651;genbank:gi:148727157;genbank:GeneID:5220102 Probab=100.00 E-value=1.3e-51 Score=299.54 Aligned_cols=159 Identities=26% Similarity=0.417 Sum_probs=142.5 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccccchhhhhhHHhhhhhhc Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKRGRGKLLKGFTQKLKHFQ 80 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~~k~kMl~~l~~~~~~~~ 80 (166) ||||+.|..+ +.++|++++|||++|++|+++||++||+++++||++|+||||+||+|||++++|||++|++.+.+.+ T Consensus 1 m~t~~~dl~~---l~~~L~ll~L~p~~RrrLl~~iar~lr~~~~~rIr~Q~~PDGs~~~pRKr~krKMl~~L~k~Lk~~~ 77 (228) T protein:vir:78 1 MITITLDTRR---GKDQLNLLALPPKKRKRLVWRAANEMKKLATRNVRQQQDPNGNAWAPRKRGKRKMLRGLPKLLQIRE 77 (228) T ss_pred CccchhhHHH---HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCChhhhhhHHHHHhhhHHhhhhhc Confidence 9999888775 6789999999999999999999999999999999999999999999999999999999998888877 Q ss_pred ccCCCeEEEEeCc-----cHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhccccccCCCCCCc Q lcl|Aclame:pro 81 RDNNRTLVVGWPS-----ARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISITASSLRGDRKEA 155 (166) Q Consensus 81 ~~~~~~~~v~~~g-----~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy~~~~~~~~k~~ 155 (166) .++ ++++|+|.+ ++|+||+|||||++++|+++++.+.|+ +.|++++|||++||++|++|||+++. ++++.+ T Consensus 78 ~~~-~~a~v~f~~~~~~~~~~rIA~vHq~G~~~~v~~~~~~~~~~--~r~~~~~paTr~QAk~Lr~lGy~~~~-~~~k~~ 153 (228) T protein:vir:78 78 PRQ-DMAELGFTKGTMSAHAGVIANTHQKGHTYKVTAASRRRIAP--SDVGKNKQASKAQARKLRELGFKRPG-KRKRAY 153 (228) T ss_pred ccc-cceEEEeecCcccchHHHHHHHHhcCcccccccchhhhhhc--ccCCCCCCCCHHHHHHHHHhhccccC-CcCCCc Confidence 654 456666654 699999999999999999988887665 57899999999999999999999764 456788 Q ss_pred cCccccccccC Q lcl|Aclame:pro 156 KSPLWHGYEKT 166 (166) Q Consensus 156 k~p~~~~~~~~ 166 (166) ++|.-.+|+++ T Consensus 154 rkps~kwI~~n 164 (228) T protein:vir:78 154 RSASLGWITAN 164 (228) T ss_pred ccCCHHHHHHH Confidence 99999999999 No 5 >protein:vir:3787 Length: 231 # NCBI annotation: orf22 # Family: family:all:743 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536827;genbank:gi:17981836;genbank:GeneID:929215 Probab=100.00 E-value=8.2e-51 Score=295.17 Aligned_cols=162 Identities=20% Similarity=0.259 Sum_probs=148.9 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccccc-----hhhhhhHHhh Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKRGR-----GKLLKGFTQK 75 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~~k-----~kMl~~l~~~ 75 (166) -|+|++|.++++.+.++|.+++|||++|++||++||++|++++++||++|+||||+||+|||+++ .+||.+|.+. T Consensus 2 ~~~~~~n~~dl~~l~~~L~ll~L~p~kRrrLl~~iak~lr~~~~~rI~~Q~~PDGs~w~pRK~~~~k~k~~rm~~kL~~~ 81 (231) T protein:vir:37 2 QIRLGLKQEDLDAFVRDLRTLNLTGKQKKKILTWTLGAIKRKSQKNIREQHSPDGTAWEKRKPVDGEIKNKRLLKKVLRY 81 (231) T ss_pred CccCCcCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCchhcccccchhhHHHHHHhHHh Confidence 57899999999999999999999999999999999999999999999999999999999998543 2599999999 Q ss_pred hhhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhcccccc---CCCC Q lcl|Aclame:pro 76 LKHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISITASSL---RGDR 152 (166) Q Consensus 76 ~~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy~~~~---~~~~ 152 (166) +++...+++++++++|+|.+|+||+|||||++++|++....+ .+.|++++|||++||++|++|||+++. ++++ T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~IA~vHQ~G~~~rv~~~~~~~----~~~~~~~~pATr~QAk~Lr~lGy~v~~~k~k~~k 157 (231) T protein:vir:37 82 ASILAEERGKGRIYYKNPLTGEIAQKQQDGFTEHFRVFATDK----NKNGSGNDRATIRQAQKLRSLGYRKRNGKNRQGK 157 (231) T ss_pred hccccccCCceEEeeecchHHHHHHHhhcCcccccchhhhhh----ccCCCCCCCCCHHHHHHHHHhcccccCCCCCCCC Confidence 999999999999999999999999999999999998765543 457999999999999999999999865 4556 Q ss_pred CCccCccccccccC Q lcl|Aclame:pro 153 KEAKSPLWHGYEKT 166 (166) Q Consensus 153 k~~k~p~~~~~~~~ 166 (166) +.+++|.-.+|++| T Consensus 158 ~~~rkps~kwI~~~ 171 (231) T protein:vir:37 158 TKYRLYTIKEIRER 171 (231) T ss_pred CCcCcCCHHHHHHh Confidence 78999999999999 No 6 >protein:vir:2026 Length: 150 # NCBI annotation: gpS # Family: family:all:370 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046769;genbank:gi:9630340;genbank:GeneID:1261511 Probab=99.89 E-value=5.4e-27 Score=164.60 Aligned_cols=139 Identities=14% Similarity=0.180 Sum_probs=115.1 Q ss_pred cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccc---------cchhhhhhHHhhh Q lcl|Aclame:pro 6 AEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKR---------GRGKLLKGFTQKL 76 (166) Q Consensus 6 ~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~---------~k~kMl~~l~~~~ 76 (166) +|+.+.++.+.+..+..|+|+.++.||++||++|+.++++||++|++|||+||+|+++ +.+.||..+.... T Consensus 1 ~~~~~~l~~~L~~ll~~l~~~~~~~l~~~Ig~~l~~~~~~rf~~q~~PdG~~W~p~k~~~~~~k~g~~~~~l~~~~~l~~ 80 (150) T protein:vir:20 1 MNEFKRFEDRLTGLIESLSPSGRRRLSAELAKRLRQSQQRRVMAQKAPDGTPYAPRQQQSVRKKTGRVKRKMFAKLITSR 80 (150) T ss_pred CchHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccchHHHHHhccCCCccccchhhhhh Confidence 8888888888888888999999999999999999999999999999999999999873 2346999998888 Q ss_pred hhhcccCCCeEEEEe-CccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhccc-ccc Q lcl|Aclame:pro 77 KHFQRDNNRTLVVGW-PSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISITA-SSL 148 (166) Q Consensus 77 ~~~~~~~~~~~~v~~-~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy~-~~~ 148 (166) .+....++++++|+| .|....||++||||++++++...+...+|+|.-.+.+ ...-..+.+..-. +.+ T Consensus 81 sl~~~~~~~~~~vg~~~Gs~~~yAa~HQfG~~~~~~~~~~~~~iPaRp~LG~s----~~d~~~i~~~i~~~l~k 150 (150) T protein:vir:20 81 FLHIRASPEQASMEFYGGKSPKIASVHQFGLSEENRKDGKKIDYPARPLLGFT----GEDVQMIEEIILAHLER 150 (150) T ss_pred hhheeecCcEEEEEeeCCcchhhhhhhhcccccccccCCCceeccccccCCCC----HHHHHHHHHHHHHHHhC Confidence 999999999999998 5999999999999999999998888888888766654 3333333332211 111 No 7 >protein:vir:6071 Length: 150 # NCBI annotation: gpS # Family: family:all:370 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878212;genbank:gi:33438911;genbank:GeneID:1457746 Probab=99.89 E-value=5.7e-27 Score=164.46 Aligned_cols=139 Identities=12% Similarity=0.168 Sum_probs=113.8 Q ss_pred cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccc---------cchhhhhhHHhhh Q lcl|Aclame:pro 6 AEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKR---------GRGKLLKGFTQKL 76 (166) Q Consensus 6 ~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~---------~k~kMl~~l~~~~ 76 (166) .|+.+.++.+.+..+..|+|+.++.||+.||++|+.++++||++|++|||+||+|++. +.+.||.++.... T Consensus 1 ~~~~~~l~~~L~~~l~~L~~~~~~~l~r~Ig~~l~~~~~~Rf~~q~~PdG~~W~p~~~~~~~~k~~~~~~~l~~~~~l~~ 80 (150) T protein:vir:60 1 MNEFKRFEDRLTGLIESLSPSGRRRLSAELAKRLRQSQQRRVMAQKAPDGTPYAPRQQQSARKKTGRVKRKMFAKLITSR 80 (150) T ss_pred CchHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccChHHHHHhhcCCCccchhhhhhcc Confidence 8888888888888888999999999999999999999999999999999999999863 3457999999999 Q ss_pred hhhcccCCCeEEEEe-CccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHh-cccccc Q lcl|Aclame:pro 77 KHFQRDNNRTLVVGW-PSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAIS-ITASSL 148 (166) Q Consensus 77 ~~~~~~~~~~~~v~~-~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~l-gy~~~~ 148 (166) .+....++++++|+| .|..+.||++||||+++++....+...+|+|.-.+.++. .-..+.+. ..-+.+ T Consensus 81 sl~~~~~~~~a~vg~~~Gt~~~yAaiHQfG~~~~~~~~~~~~~iPaRp~LG~s~~----d~~~i~~~i~~~l~r 150 (150) T protein:vir:60 81 FLHIRASPEQASMEFYGGKSPKIASVHQFGLSEENRKDGKKIDYPARPLLGFTGE----DVQMIEEIILAHLDR 150 (150) T ss_pred eeeeeeeCcEEEEEeeCCCchhhhhhhhccccccccCCCCceecCCcccCCCCHH----HHHHHHHHHHHHHhC Confidence 999999999999988 699999999999999999988888888888876655422 22222221 111111 No 8 >protein:vir:100312 Length: 152 # NCBI annotation: tail synthesis protein S # Family: family:all:370 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655481;genbank:gi:109289949;genbank:GeneID:4157355 Probab=99.89 E-value=7.1e-27 Score=163.95 Aligned_cols=139 Identities=24% Similarity=0.298 Sum_probs=105.4 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCccccc---------chhhhhh Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKRG---------RGKLLKG 71 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~~---------k~kMl~~ 71 (166) |-+ +...++.+.+..+..|+|+.|+.||++||++|+.++++||++|++|||+||+|+++. ..+||.+ T Consensus 1 M~~----~~~~~~~~L~~ll~~L~~~~r~~l~~~Ig~~l~~~t~~Rf~~q~~PDG~pW~p~k~~~~~~k~~~~~~~m~~~ 76 (152) T protein:vir:10 1 MSE----PIEQVKTAFDSLLNNISKPRRRLMYQQIGRELARSQRRRIKAQQNPDGSAYEPRKKPKKGVKSKIKSGKMFDK 76 (152) T ss_pred Cch----HHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhhhhhhhhcccccchhHHHh Confidence 322 344555566666778999999999999999999999999999999999999998743 3479999 Q ss_pred HHhhhhhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccc-hhhhHhhcCCCCCCCCCHHHHHHHHHhc--c-ccc Q lcl|Aclame:pro 72 FTQKLKHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSAR-KRQAKQQNEPRKTDPATREQAKRCAISI--T-ASS 147 (166) Q Consensus 72 l~~~~~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~-~~~~~~r~~~~~~~pAt~~QAk~Lr~lg--y-~~~ 147 (166) |....++....+++++.|+|.|....||+|||||+++++..... .+.+|+|.-.+.++. .-..+.+.- | +.. T Consensus 77 L~~a~~l~~~a~~~~~~Vg~~Gt~~~yAaiHQfG~~~r~~~~~~~~v~iPaRp~LG~s~~----d~~~I~~~i~~~l~~a 152 (152) T protein:vir:10 77 ITQPRFMRLRLESEGVSLGYEGGDAVIARIHQQGLIGRVRKDWDLKVKYASRELLGFTDD----DLQMIEDYMINILAGS 152 (152) T ss_pred hhhcceeeeeecCcEEEEEecCCchhhhhhhccCccccccCCCCcceeccccccCCCCHH----HHHHHHHHHHHHHhcC Confidence 99999999999999999999999999999999999998876533 445666655544422 212221110 0 000 No 9 >protein:vir:1164 Length: 156 # NCBI annotation: predicted tail completion # Family: family:all:370 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490613;genbank:gi:17313233;genbank:GeneID:927308 Probab=99.89 E-value=9.9e-27 Score=163.15 Aligned_cols=145 Identities=21% Similarity=0.276 Sum_probs=112.0 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccc-----------cchhhh Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKR-----------GRGKLL 69 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~-----------~k~kMl 69 (166) |- |+.+.++.+.+.++..|+|+.++.||++||++|+.++++||++|++|||+||+|+++ ++..|| T Consensus 1 m~----~~~~~l~~~L~~ll~~L~~~~~~~l~r~Ig~~l~~~t~~Rf~~q~~PdG~~W~p~~~~~~~~~~~~~~~~~~m~ 76 (156) T protein:vir:11 1 MA----DSLEALEDWAGPILRALEPGPRAALARSLARDLRRSQQKRVMAQRNPDGSAYEPRKKRELRGKQGRIRRKIKMF 76 (156) T ss_pred Cc----hhHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccchHHHhhhccccccchhhh Confidence 32 345555566666677899999999999999999999999999999999999999872 234699 Q ss_pred hhHHhhhhhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhccccccC Q lcl|Aclame:pro 70 KGFTQKLKHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISITASSLR 149 (166) Q Consensus 70 ~~l~~~~~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy~~~~~ 149 (166) .+|....++....+++++.|+|.|..+.||++||||++++++...+.+.+|+|.-.+.+ ...-..+.+.-..-- T Consensus 77 ~~l~~~~~l~~~~~~~~a~vg~~Gs~~~yA~iHQfG~~~~~~~~~~~v~iPaRp~LG~s----~~d~~~i~~~i~~~l-- 150 (156) T protein:vir:11 77 QKLRTVRYLRAKGDAQAITVSFAGRIARIARVHQYGLRDRAEPGAPEVSYAQRLLLGFD----SSDMETIQNGILAHI-- 150 (156) T ss_pred hhhhhhheeeeeecCcEEEEEecCCchhhhhhhcccccccccCCCCcccccccccCCCC----HHHHHHHHHHHHHHH-- Confidence 99999999999999999999999999999999999999999988888888888766544 233333332211000 Q ss_pred CCCCCccCcc Q lcl|Aclame:pro 150 GDRKEAKSPL 159 (166) Q Consensus 150 ~~~k~~k~p~ 159 (166) ....|+ T Consensus 151 ----~~~~~~ 156 (156) T protein:vir:11 151 ----DANSPI 156 (156) T ss_pred ----hhcCCC Confidence 011222 No 10 >protein:vir:5703 Length: 150 # NCBI annotation: gpS # Family: family:all:370 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839862;genbank:gi:30065717;genbank:GeneID:1260611 Probab=99.89 E-value=9.9e-27 Score=163.15 Aligned_cols=139 Identities=14% Similarity=0.175 Sum_probs=113.3 Q ss_pred cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccc---------cchhhhhhHHhhh Q lcl|Aclame:pro 6 AEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKR---------GRGKLLKGFTQKL 76 (166) Q Consensus 6 ~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~---------~k~kMl~~l~~~~ 76 (166) .|+.+.++......+..|+|+.++.||+.||++|+.++++||++|++|||+||+|++. +.+.||.++.... T Consensus 1 m~~~~~l~~~L~~~l~~L~~~~~~~l~~~Ig~~l~~~~~~rf~~q~~PdG~~W~p~k~~~~~~k~~~~~~~l~~~~~l~~ 80 (150) T protein:vir:57 1 MNEFKRFEDRLTGLIESLSPSGRRRLSAELAKRLRQSQQRRVMAQKAPDGTPYAPRQQQSARKKTGRVKRKMFAKLITSR 80 (150) T ss_pred CchHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccChHHHHHhccCCCcccchhhhhcc Confidence 7888888888888888999999999999999999999999999999999999999863 3457999999888 Q ss_pred hhhcccCCCeEEEEe-CccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhcc-cccc Q lcl|Aclame:pro 77 KHFQRDNNRTLVVGW-PSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISIT-ASSL 148 (166) Q Consensus 77 ~~~~~~~~~~~~v~~-~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy-~~~~ 148 (166) .+....+++.++|+| .|..+.||++||||++++++...+...+|+|.-.+.+ ...-..+.+.-- -..+ T Consensus 81 sl~~~~~~~~a~vg~~~G~~~~yAaiHQfG~~~r~~~~~~~~~iPaRp~LG~s----~~d~~~i~~~i~~~l~r 150 (150) T protein:vir:57 81 FLHIRASPEQASMEFYGGKSPKIASVHQFGLSEETRKDGKKIDYPARPLLGFT----GEDVQMIEEIILAHLDR 150 (150) T ss_pred ceeeeeeCcEEEEEeecCCchhhhhhhhccccccccCCCceeecCCcccCCCC----HHHHHHHHHHHHHHHhC Confidence 899999999999988 5999999999999999999888888888887665544 333333322111 1111 No 11 >protein:vir:79115 Length: 148 # NCBI annotation: tail completion protein gpS # Family: family:all:370 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165266;genbank:gi:145708091;genbank:GeneID:5247126 Probab=99.89 E-value=1.1e-26 Score=162.93 Aligned_cols=140 Identities=19% Similarity=0.233 Sum_probs=113.5 Q ss_pred cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccc------c--chhhhhhHHhhhh Q lcl|Aclame:pro 6 AEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKR------G--RGKLLKGFTQKLK 77 (166) Q Consensus 6 ~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~------~--k~kMl~~l~~~~~ 77 (166) .|+.+.++.+...++..|+|+.++.||+.||++|+.++++||++|++|||+||+|+++ + ++.||..|....+ T Consensus 1 m~~~~~l~~~L~~ll~~l~~~~~~~l~r~Ig~~l~~st~~Rf~~q~~PDG~~W~p~s~~~~~~~g~~~~~~~~~l~~~~~ 80 (148) T protein:vir:79 1 MSESRELEAWLAGMLTKLDAPARRMLARAVAAELRRRQAARIAEQRNPDGSPYVPRKPQLRHRAGRIRRAMFMRLRLARY 80 (148) T ss_pred CccHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCcccchHHHhhcccccccccchhhhhhh Confidence 6777777777788888999999999999999999999999999999999999999752 2 3569999999999 Q ss_pred hhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhccccccCC Q lcl|Aclame:pro 78 HFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISITASSLRG 150 (166) Q Consensus 78 ~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy~~~~~~ 150 (166) ++...+++++.|+|.|....||++||||++++++...+.+.+|+|.-.+.+. ..-..+.+.... -.-| T Consensus 81 l~~~~~~~~~~v~~~Gt~~~yAaiHQfG~~~r~~~~~~~v~iPaRp~LG~s~----~d~~~i~~~i~~-~l~~ 148 (148) T protein:vir:79 81 MKTQADANTAVVTFAGNAQRIATVHQFGLRDRVNKAGLTAQYPARELLGMDG----VDMEHITNLLLL-HLGA 148 (148) T ss_pred eeeeeeCCeeeEEeeccchhhhhhhhcCccccccCCCCccccCcccccCCCH----HHHHHHHHHHHH-HhcC Confidence 9999999999999999999999999999999998888888888887665543 333333322110 0000 No 12 >protein:vir:79179 Length: 155 # NCBI annotation: gp39, phage virion morphogenesis protein # Family: family:all:370 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111070;genbank:gi:134288746;genbank:GeneID:4960698 Probab=99.88 E-value=3.5e-26 Score=160.11 Aligned_cols=139 Identities=20% Similarity=0.230 Sum_probs=109.8 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCccccc--------------ch Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKRG--------------RG 66 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~~--------------k~ 66 (166) |. |+.+.++.+.+.++..|+|+.++.||+.||..|+.++++||++|++|||+||+|||.. +. T Consensus 1 m~----~~~~~l~~~l~~ll~~l~~~~~~~l~r~Ig~~l~~~t~~Rf~~q~~PDG~~W~prk~~~~~~~~~~~~g~~~~~ 76 (155) T protein:vir:79 1 MT----DDLQALERWAGGLLAKLSPAARRQLLRELGRDLRRAQQSRVAAQRNPDGSAYEPRKVKAGGKRLREKAGRVKRE 76 (155) T ss_pred Cc----hHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccchhhhhhhhhcccCcccch Confidence 54 4566666666666778999999999999999999999999999999999999998632 12 Q ss_pred hhhhhHHhhhhhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHh--cc Q lcl|Aclame:pro 67 KLLKGFTQKLKHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAIS--IT 144 (166) Q Consensus 67 kMl~~l~~~~~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~l--gy 144 (166) -||.+|....++....++++++|+|.|....||+|||||++++++...+...+|+|.-.+.++. -. ..+.+. -| T Consensus 77 ~m~~~l~~a~~l~~~~~~d~a~Vg~~Gs~~~yAaiHQfG~~~r~~~~~~~v~iPaRp~LGls~~--d~--~~I~~~i~~~ 152 (155) T protein:vir:79 77 AMFRKLRTARYLRIDVDSTGLAIGFDERLSRIARVHQEGQKAPVEPGGPLAQYPVRVVLGFSDA--DR--ELVRDRLLRE 152 (155) T ss_pred hhhhhhhhhheeeeeecCcEEEEEecCcchhhhhhhhcCCcccCCCCCcccccccccccCCCHH--HH--HHHHHHHHHH Confidence 3999999999999999999999999999999999999999999988888888888766554422 22 222221 11 Q ss_pred cccc Q lcl|Aclame:pro 145 ASSL 148 (166) Q Consensus 145 ~~~~ 148 (166) = .+ T Consensus 153 l-~r 155 (155) T protein:vir:79 153 L-TR 155 (155) T ss_pred h-hC Confidence 1 11 No 13 >protein:vir:98557 Length: 149 # NCBI annotation: gp14 # Family: family:all:370 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958069;genbank:gi:41057366;genbank:GeneID:2744228 Probab=99.88 E-value=4.2e-26 Score=159.72 Aligned_cols=140 Identities=19% Similarity=0.224 Sum_probs=111.3 Q ss_pred cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccc---------cchhhhhhHHhhh Q lcl|Aclame:pro 6 AEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKR---------GRGKLLKGFTQKL 76 (166) Q Consensus 6 ~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~---------~k~kMl~~l~~~~ 76 (166) .|+.+.++.+...++..|+|+.++.||+.||.+|+.++++||++|++|||+||+|+++ .++.||.++.... T Consensus 1 m~d~~~l~~~L~~ll~~L~~~~~~~ll~~Ig~~l~~~t~~rf~~q~~PdG~~W~p~~~~~~~~k~~~~~~~l~~~g~l~~ 80 (149) T protein:vir:98 1 MSELTALQERLTGLIASLSPAARRQMAADIAKKLRASQQQRIRRQQAPDGTPYAARKRQSVRSKKGRIRREMFARLRTNR 80 (149) T ss_pred CchHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccchHHHHhccCCCCcccchhhhhhh Confidence 6666766666666677899999999999999999999999999999999999999864 2357999998888 Q ss_pred hhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhccccccC Q lcl|Aclame:pro 77 KHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISITASSLR 149 (166) Q Consensus 77 ~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy~~~~~ 149 (166) .+....++++++|+|.|....||++||||.+++++...+....|+|.-.+.+ ...-..+.+....-=.+ T Consensus 81 sl~~~~~~~~~~V~~~Gs~~~yAa~HQfG~~~r~~~~~~~~~iPaRp~LG~s----~~d~~~i~~~i~~~l~~ 149 (149) T protein:vir:98 81 FMKAKGSDSAAVVEFTGRVQRMARVHQYGLKDRPNRHSRDVQYAARPLLGFT----RDDEQMIEDIIIRHLGK 149 (149) T ss_pred hhhheecCCeeEEEecCcchHHhhHhhccccccccCCCcceeccccccCCCC----HHHHHHHHHHHHHHhhC Confidence 8999999999999999999999999999999999888887888887665544 22223332221110000 No 14 >protein:vir:1838 Length: 149 # NCBI annotation: O protein # Family: family:all:370 # MgeID: mge:324 # MgeName: 186 # Cross-refs: genbank:acc:NP_052262;genbank:gi:9634069;genbank:GeneID:1262457 Probab=99.88 E-value=5e-26 Score=159.31 Aligned_cols=139 Identities=19% Similarity=0.242 Sum_probs=110.8 Q ss_pred cchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCccccc---------chhhhhhHHhhh Q lcl|Aclame:pro 6 AEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKRG---------RGKLLKGFTQKL 76 (166) Q Consensus 6 ~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~~---------k~kMl~~l~~~~ 76 (166) .|+.+.+..+...++..|+|+.++.||+.||.+|+.++++||++|++|||+||+|+++. ++.||.+|.... T Consensus 1 m~~~~~~~~~l~~ll~~L~~~~~~~l~r~Ig~~l~~~t~~rf~~q~~PdG~~W~p~~~~~~~~~~g~~~~~~~~~l~~~~ 80 (149) T protein:vir:18 1 MSELTALQERLAGLIASLSPAARRKMAAEIAKKLRTSQQQRIKRQQAPDGTPYAARKRQPVRSKKGRIKREMFAKLRTSR 80 (149) T ss_pred CchHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcccchhhhhhccCcccchhhhhhhhhh Confidence 55666666677777889999999999999999999999999999999999999998743 357999999888 Q ss_pred hhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhccc-ccc Q lcl|Aclame:pro 77 KHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISITA-SSL 148 (166) Q Consensus 77 ~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy~-~~~ 148 (166) .+....+++++.|+|.|....||++||||++++++...+...+|+|.-.+.+ ...-..+.+..-. ... T Consensus 81 ~l~~~~~~~~~~v~~~Gtn~~yAaiHQfG~~~r~~~~~~~v~iPaRp~LG~s----~~d~~~I~~~i~~~l~~ 149 (149) T protein:vir:18 81 FMKAKGSDSAAVVEFTGKVQRMARVHQYGLKDRPNRNSRDVQYEARPLLGFT----RDDEQMIEDVIISHLGK 149 (149) T ss_pred hhheeecCceeEEEecccchhhhhhhhccccccccCCCccccccccccCCCC----HHHHHHHHHHHHHHHhC Confidence 8999999999999999999999999999999999988887778887665544 2222222211100 000 No 15 >protein:vir:99833 Length: 190 # NCBI annotation: hypothetical protein # Family: family:all:274 # MgeID: mge:1480 # MgeName: B3 # Cross-refs: genbank:acc:YP_164071;genbank:gi:56692603;genbank:GeneID:3192561 Probab=99.55 E-value=1.2e-17 Score=113.44 Aligned_cols=146 Identities=21% Similarity=0.193 Sum_probs=79.7 Q ss_pred Ccccccc--hhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccc--------cchhhhh Q lcl|Aclame:pro 1 MFEIKAE--DRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKR--------GRGKLLK 70 (166) Q Consensus 1 M~~i~~d--~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~--------~k~kMl~ 70 (166) |+.|++. ..++... ..-++..|+ ..+.|++.||+.|+.++++||++|++|||+||+|++. +..+.|. T Consensus 1 M~~i~i~~d~~~~~~~-L~~l~~~~~--~~~~l~~~ig~~l~~~~~~rf~~~~~PdG~~W~p~~~~t~~rk~~~~~~~L~ 77 (190) T protein:vir:99 1 MAGITLEWDGRRALDV-LNAGSAALG--DPSGLLQDIGELLLNIHRRRFQAQVSPDGTPWQPLSPAYLRRKRKNRDKILT 77 (190) T ss_pred CceeEEEecHHHHHHH-HHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccHHHHHHhhcCCCccce Confidence 7766555 4433332 222223343 4568999999999999999999999999999999752 2234444 Q ss_pred hHHhh-hhhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhcc-cccc Q lcl|Aclame:pro 71 GFTQK-LKHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISIT-ASSL 148 (166) Q Consensus 71 ~l~~~-~~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy-~~~~ 148 (166) .-..+ ..+....+++.+.||++. .||++||||.++.+.+......+... .+.-..|. .++. T Consensus 78 ~tg~L~~Si~~~~~~~~v~vGtn~---~yA~iHq~Gg~i~~~~~~~~~~~~~~--------------~~~g~~~~~~~~~ 140 (190) T protein:vir:99 78 LDGHLRNLLRYQLDGSELLFGSDR---PYAAIHHFGGTIQRQARSSTVYFRQN--------------ERTGEVGREFVPR 140 (190) T ss_pred ecHHHHHHHhheecCcEEEEecCc---chhhhhhcCCcccccccchhhhhhhh--------------hhhhhhhcccccc Confidence 32222 234556778899998764 57999999999887654333222111 11111111 0110 Q ss_pred CCCCCC---ccCcccc--------ccccC Q lcl|Aclame:pro 149 RGDRKE---AKSPLWH--------GYEKT 166 (166) Q Consensus 149 ~~~~k~---~k~p~~~--------~~~~~ 166 (166) +..... ...+.|- |+.+. T Consensus 141 ~~~~~~~~~~~~~~~v~IPaRpfLG~s~~ 169 (190) T protein:vir:99 141 RRSNFAQDVQIGPYTIQMPARPWLGTSSQ 169 (190) T ss_pred cccccchhcccccceeeecCcccCCCCHH Confidence 000000 0000000 11111 No 16 >protein:vir:1988 Length: 156 # NCBI annotation: putative virion morphogenesis protein # Family: family:all:274 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050635;genbank:gi:9633522;genbank:GeneID:2636282 Probab=99.51 E-value=2.7e-17 Score=111.41 Aligned_cols=133 Identities=15% Similarity=0.167 Sum_probs=83.1 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCccCccccc-----------chhh Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPD-GSAWAKRKRG-----------RGKL 68 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PD-Gt~w~pRK~~-----------k~kM 68 (166) =|++++|...+. ..|..+. ++...+.||+.||..|+.++++||.+|++|| |+||+|++.. ..++ T Consensus 4 ~i~~~~d~~~l~---~~L~~l~-~~~~~~~l~~~Ig~~l~~~~~~rf~~~~~Pd~G~~W~pls~~t~~~r~~~~~~~~~~ 79 (156) T protein:vir:19 4 DMNVAVDVRRIQ---LALDELG-TVTRDRAIPRVMAAALLSSTEQAFERQADPDTGKGWEAWSDSWLAWRQDHGFVPGSI 79 (156) T ss_pred EEEEeecHHHHH---HHHHHHH-hhhccHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcccChHHHHHhhccCCCCCcc Confidence 234555555444 4444332 2333457999999999999999999999998 9999995421 1346 Q ss_pred hhhHHhhh-hhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHh----- Q lcl|Aclame:pro 69 LKGFTQKL-KHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAIS----- 142 (166) Q Consensus 69 l~~l~~~~-~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~l----- 142 (166) |..=..+. .+....++++|.||++. .||+|||||.++.+.+... .+|+|.-.+.+ ...-....+. T Consensus 80 L~~tg~L~~Si~~~~~~~~v~vGt~~---~yA~vHqfG~~~~~~~~~~--~iPaRpfLG~s----~~d~~~I~~~i~~~l 150 (156) T protein:vir:19 80 LTLHGDLARSITTDYGQDYALIGSPK---IYAAIHQWGGTPDMAPRPA--GVPARPYMGLD----KTGEQEIFDAIRKRV 150 (156) T ss_pred hhhhHHHHHHhhheecCCEEEEecch---hhhHHhhcCcccccCCCcc--ccCCccccCCC----HHHHHHHHHHHHHHH Confidence 65433333 45667788999998764 6899999999988765433 34555443333 3322222211 Q ss_pred --cccc Q lcl|Aclame:pro 143 --ITAS 146 (166) Q Consensus 143 --gy~~ 146 (166) .++. T Consensus 151 ~~~~~~ 156 (156) T protein:vir:19 151 SAALRQ 156 (156) T ss_pred HHHhhC Confidence 1121 No 17 >protein:vir:107851 Length: 175 # NCBI annotation: gp31 # Family: family:all:274 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024704;genbank:gi:48696941;genbank:GeneID:2845939 Probab=99.42 E-value=8.4e-16 Score=103.23 Aligned_cols=138 Identities=18% Similarity=0.152 Sum_probs=84.4 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccc------c---------- Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKR------G---------- 64 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~------~---------- 64 (166) ||+|++|+.++......|....- ..+.||+.||..|..+++.||.+|.+|||+||.|... + T Consensus 4 ~i~i~~~~~~l~~~L~~l~~~~~---d~~~l~~~Ig~~l~~~t~~rF~~e~~Pdw~p~~p~t~~~r~~~g~~~~k~~~~~ 80 (175) T protein:vir:10 4 FVNFQIDDSALRTRLLQLEQAGH---QKAGAMRKIAQALVLVTEDNFAAQGRPRWQALSEATIHMRVGGKKAYKKNGELT 80 (175) T ss_pred eEEEEecHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCchhhhhhhhcccccchhhhhhh Confidence 99999998766655555543322 3457999999999999999999999999999999531 1 Q ss_pred --------chhhhhhHHhhh-hhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCC--CH Q lcl|Aclame:pro 65 --------RGKLLKGFTQKL-KHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPA--TR 133 (166) Q Consensus 65 --------k~kMl~~l~~~~-~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pA--t~ 133 (166) ..++|..=..+. .+....+++.|.||++- .||++||||++..... ....|+|.-.+.++.- -. T Consensus 81 ~~~~~~~~~~~~L~~tG~L~~Si~~~~~~~~v~vGtn~---~YAaiHqfGg~~~~~~---~v~iPaRpfLG~s~~d~~~~ 154 (175) T protein:vir:10 81 AAASRRKAGLMILQDSGQMAASVSTDHDDNSAVIGSNK---EYAAIHQFGGQAGRGL---KVTIPARPWLPVTADGELQP 154 (175) T ss_pred hhhhhhccCCCcceechhhhhhhheeecCCEEEEecCh---hhhhhhhcccccCCCC---ccccCCccccCCCcccccch Confidence 011222211111 23445678899998765 4899999999765432 2344555444443321 11 Q ss_pred HHHHH-----HHHh--ccccc Q lcl|Aclame:pro 134 EQAKR-----CAIS--ITASS 147 (166) Q Consensus 134 ~QAk~-----Lr~l--gy~~~ 147 (166) ..-.. ++.+ .++.+ T Consensus 155 e~~~~Il~~~~~~l~~~~~~~ 175 (175) T protein:vir:10 155 EAVEPVLNTILRHLMDAANRR 175 (175) T ss_pred HHHHHHHHHHHHHHHHHhccC Confidence 11111 2222 33322 No 18 >protein:vir:79091 Length: 175 # NCBI annotation: gp5, phage virion morphogenesis protein # Family: family:all:274 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111205;genbank:gi:134288802;genbank:GeneID:4960765 Probab=99.27 E-value=3.3e-14 Score=94.46 Aligned_cols=138 Identities=17% Similarity=0.152 Sum_probs=82.9 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCccc------cc---------- Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRK------RG---------- 64 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK------~~---------- 64 (166) ||+|++|+.++......|...- ...+.||+.||..|..+++.||.+|.+||++||.|.. .+ T Consensus 4 ~i~i~~d~~~~~~~L~~l~~~~---~d~~~lm~~Ig~~l~~~t~~rF~~~~~PdW~pls~~t~~~r~~~~~~~~~~~~~~ 80 (175) T protein:vir:79 4 FVNFQIDDSALRTRLLQLEQAG---HQKADAMRKITQALVLVTEDNFAAQGRPRWQALSEATIHMRVGGKKAYKKNGELT 80 (175) T ss_pred EEEEEechHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChHHHHhhccccccccccccch Confidence 9999999987665544444332 2445799999999999999999999999999999942 01 Q ss_pred --------chhhhhhHHhhh-hhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHH- Q lcl|Aclame:pro 65 --------RGKLLKGFTQKL-KHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATRE- 134 (166) Q Consensus 65 --------k~kMl~~l~~~~-~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~- 134 (166) ..++|..=..+. .+....+++.|.||++- .||+|||||...... .....|+|.-.+.++.--.. T Consensus 81 ~~~~~~~~~~~~L~~tG~L~~Si~~~~~~~~v~vGtn~---~YAaiHqfGg~~~~~---~~v~IPARPfLG~s~~de~~~ 154 (175) T protein:vir:79 81 AAASRRKAGLMILQDSGQMAASTATDSGEDYSVIGSNK---EYAAIQHFGGQAGRG---LKVTIPGRAWLPVTADGELQP 154 (175) T ss_pred hhHhhhccCCCcceechhhhhhhhheecCCEEEEecCc---chhhHhhcccccCCC---cccccCcccccCCCcccchhH Confidence 112333322222 24455788899998875 589999999864322 12334444433333221100 Q ss_pred HH-HH-----HH--Hhccccc Q lcl|Aclame:pro 135 QA-KR-----CA--ISITASS 147 (166) Q Consensus 135 QA-k~-----Lr--~lgy~~~ 147 (166) .| .. .. +..++.+ T Consensus 155 ~~~~~I~~~i~~~l~~a~~~~ 175 (175) T protein:vir:79 155 EAVEPVLNTILRHLMDAANRR 175 (175) T ss_pred HHHHHHHHHHHHHHHHHhccC Confidence 01 11 11 2233322 No 19 >protein:vir:99196 Length: 155 # NCBI annotation: putative virion morphogenesis protein # Family: family:all:274 # MgeID: mge:1649 # MgeName: DMS3 # Cross-refs: genbank:acc:YP_950453;genbank:gi:119953654;genbank:GeneID:4643056 Probab=99.23 E-value=5.6e-14 Score=93.22 Aligned_cols=137 Identities=14% Similarity=0.123 Sum_probs=81.9 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCcccc---------c--chhhh Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKR---------G--RGKLL 69 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~---------~--k~kMl 69 (166) ||+|++|..++......|... + ...+.||+.||..|+.+++.||. |||+||+|.+. + ..++| T Consensus 4 ~i~i~~d~~~~~~~L~~l~~~-~--~d~~~l~~~ig~~l~~~~~~rF~----pdG~~W~pls~~t~~~r~~~g~~~~~iL 76 (155) T protein:vir:99 4 RIDVELDDQEVRQRLALLMRS-V--TDTLPVMRGIAAELLAETEFAFM----DEGPGWPQLSPVTVAAREAKGRGPHPIL 76 (155) T ss_pred EEEEEechHHHHHHHHHHHHH-h--hhHHHHHHHHHHHHHHHHHHHhh----ccCCCCCCCChHHHHHHhccCCCCCCcc Confidence 999999998655443333322 2 35689999999999999999994 99999999531 1 23566 Q ss_pred hhHHhhh-hhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCH--HHHHHHHH-hccc Q lcl|Aclame:pro 70 KGFTQKL-KHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATR--EQAKRCAI-SITA 145 (166) Q Consensus 70 ~~l~~~~-~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~--~QAk~Lr~-lgy~ 145 (166) ..=..+. .+....+++.|.||.+- .||+|||||++..... ....|+|.-.+.++.-.. .--....+ +.-- T Consensus 77 ~~tg~L~~Si~~~~~~~~v~vGtn~---~YA~iHqfGg~~~~~~---~v~iPaRpfLG~s~~~~l~~e~~~~I~~~i~~~ 150 (155) T protein:vir:99 77 QVTNALARSVTTWADRNEAGIGSNL---VYAAIHQFGGDAGRGH---QVEIPARRYLPFDENGQLAAGARQSILEIVLTA 150 (155) T ss_pred hhchhhhhhhhceecCCEEEEecCc---cchhhhhcccccCCCC---ccccCCccccCCCCccccchHHHHHHHHHHHHH Confidence 6533332 24456788899998765 4799999999865432 233445544443332111 11111111 1111 Q ss_pred cccCCC Q lcl|Aclame:pro 146 SSLRGD 151 (166) Q Consensus 146 ~~~~~~ 151 (166) .+ +++ T Consensus 151 l~-~~~ 155 (155) T protein:vir:99 151 LS-RNR 155 (155) T ss_pred Hh-ccC Confidence 11 111 No 20 >protein:vir:79225 Length: 155 # NCBI annotation: virion morphogenesis protein # Family: family:all:274 # MgeID: mge:1867 # MgeName: Phage MP22 # Cross-refs: genbank:acc:YP_001469157;genbank:gi:157835000;genbank:GeneID:5648806 Probab=99.10 E-value=6.5e-13 Score=87.38 Aligned_cols=138 Identities=12% Similarity=0.112 Sum_probs=81.0 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCccc---------c--cchhhh Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRK---------R--GRGKLL 69 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK---------~--~k~kMl 69 (166) ||+|++|..++......|... + .....||+.||..|..+++.||. |||++|+|.+ + +..++| T Consensus 4 ~i~i~~d~~~~~~~L~~l~~~-~--~d~~~l~~~ig~~l~~~~~~rF~----~eG~~W~pls~~t~~~r~~~g~~~~~iL 76 (155) T protein:vir:79 4 RIDVELDDQEVRQRLAVLMRS-V--TDTLPVMRGIAAELLAETEFAFM----DEGPGWPQLSPATVAAREAKGRGPHPIL 76 (155) T ss_pred EEEEEechHHHHHHHHHHHHH-h--hhHHHHHHHHHHHHHHHHHHHhh----ccCCCCCCCCHHHHHHHhccCCCCCCcc Confidence 999999998665444444322 1 35678999999999999999994 9999999932 1 124577 Q ss_pred hhHHhhh-hhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCC--HHHHHHHHHhcccc Q lcl|Aclame:pro 70 KGFTQKL-KHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPAT--REQAKRCAISITAS 146 (166) Q Consensus 70 ~~l~~~~-~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt--~~QAk~Lr~lgy~~ 146 (166) ..=..+. .+....+++.|.||.+- .||++||||++...... ...|+|.-.+.++.-- ..--..+.+..-.- T Consensus 77 ~~tG~L~~Si~~~~~~~~v~vGt~~---~YA~iHqfGg~~~~~~~---v~iPaRpfLG~s~~~~l~~~~~~~I~~~i~~~ 150 (155) T protein:vir:79 77 QVTNALARSVTTWADRNEAGIGSNL---VYAAIHQFGGDAGRGHQ---VEIPARRYLPFDENGQLAAGARQSILEVVLTA 150 (155) T ss_pred ccchhhhhhhhceecCCEEEEecCc---hhhhhhhcccccCCCCc---cccCCccccCCCCccccchHHHHHHHHHHHHH Confidence 6633333 24456778899997654 48999999997654321 2234443333332211 11111222211111 Q ss_pred ccCCC Q lcl|Aclame:pro 147 SLRGD 151 (166) Q Consensus 147 ~~~~~ 151 (166) -.+|+ T Consensus 151 l~r~r 155 (155) T protein:vir:79 151 LSRNR 155 (155) T ss_pred HHhcC Confidence 11222 No 21 >protein:vir:103841 Length: 155 # NCBI annotation: virion morphogenesis protein # Family: family:all:274 # MgeID: mge:1522 # MgeName: D3112 # Cross-refs: genbank:acc:NP_938236;genbank:gi:38229141;genbank:GeneID:2648156 Probab=98.92 E-value=9.6e-12 Score=80.99 Aligned_cols=136 Identities=14% Similarity=0.120 Sum_probs=77.5 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCccc---------c--cchhhh Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRK---------R--GRGKLL 69 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK---------~--~k~kMl 69 (166) =|+|++|+.++......|... ......||+.||..|+.+++.||. |||+||+|.+ + +..++| T Consensus 4 ~i~i~~~~~~~~~~L~~l~~~---~~~~~~l~~~ig~~l~~~~~~rF~----p~G~~W~plsp~t~~~r~k~g~~~~~~L 76 (155) T protein:vir:10 4 RIELELVDREVQERLAALYAA---VTDTLPLMRGIAAELLAETEFAFM----DEGPGWPQLSPVTVAARAAKGRGAHPIL 76 (155) T ss_pred eEEEEechHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHHHh----hcCCCCCCCCccchHHHHhccCCCCCcc Confidence 367777776555444433322 235578999999999999999994 9999999843 1 223566 Q ss_pred hhHHhhh-hhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHh----cc Q lcl|Aclame:pro 70 KGFTQKL-KHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAIS----IT 144 (166) Q Consensus 70 ~~l~~~~-~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~l----gy 144 (166) ..=..+. .+....+++.|.||.+- .||+|||||.+...... ...|+|.-.+.+ ..-+....+.+. -- T Consensus 77 ~~tG~L~~Si~~~~~~~~v~vGtn~---~YA~iHqfGg~~~~~~~---~~iPARPfLG~s--~~~e~~~ei~~~I~~~i~ 148 (155) T protein:vir:10 77 QVTNALARSITTRADRDQAQIGSNL---SYAAIQQLGGQAGRGRK---VTIPARPYLPVL--RNGQLKPSARDAVLDVLL 148 (155) T ss_pred ccchhhhhhhhceecCCEEEEecCc---chhhhhhcccccCCCCc---cccCCccccCCC--ccccchHHHHHHHHHHHH Confidence 6533333 24456788999998764 48999999997654322 233444333322 211111111100 00 Q ss_pred ccccCCC Q lcl|Aclame:pro 145 ASSLRGD 151 (166) Q Consensus 145 ~~~~~~~ 151 (166) ..-.+|+ T Consensus 149 ~~l~~~r 155 (155) T protein:vir:10 149 AALSQGR 155 (155) T ss_pred HHHhhcC Confidence 0011222 No 22 >protein:vir:3163 Length: 145 # NCBI annotation: unknown # Family: family:all:28417 # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665934;genbank:gi:22091120;genbank:GeneID:951270 Probab=98.69 E-value=1.6e-10 Score=74.29 Aligned_cols=128 Identities=18% Similarity=0.156 Sum_probs=73.7 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccCccc------ccchhhhhh--- Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRK------RGRGKLLKG--- 71 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK------~~k~kMl~~--- 71 (166) ||+..-|..++++... . .+.| .|.+|+..+..+...||.++++|||.||+|-. ++..+.|.. T Consensus 1 ~i~~~~~i~~~l~~l~---~-~~~~-----~l~~i~~~~~~~~~~rf~~~~~p~G~~W~pLs~st~a~k~~~~~L~~tG~ 71 (145) T protein:vir:31 1 MVEDENNIPEAREAIQ---D-GLTD-----GLERLHTITLRELITNMSDGQDALGNPWEPLKESTIRAKGSDTPLIDNSR 71 (145) T ss_pred CcccHHHHHHHHHHHH---H-HHHH-----HHHHHHHHHHHHHHHHHHhcCCCCCCCCcccChHHHHHhcCCCCCccCHH Confidence 9998888777665322 1 2333 48889999999999999999999999999932 334456664 Q ss_pred HHhhhhhhc--ccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHH-HH-----Hhc Q lcl|Aclame:pro 72 FTQKLKHFQ--RDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKR-CA-----ISI 143 (166) Q Consensus 72 l~~~~~~~~--~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~-Lr-----~lg 143 (166) |........ ..++..+.||.+- .||++||||...- .-|+ |.-.+.+..-....+.. +. .|+ T Consensus 72 L~~Si~~~~~~~~~~~~a~vGtn~---~YA~~hqfG~~~~---~IPa-----RPfLG~~~~~~~~~~~~ii~~~i~~~L~ 140 (145) T protein:vir:31 72 LLTDINAASMMDRANRMAVIGTNL---DYAEHHEFGAPEA---GIPA-----RPIFGPAGAYASQQAPDVIGDEIDTNLE 140 (145) T ss_pred HHHHHHHHhhhcccCceeEecCCc---hhhhhhccCCccc---ccCC-----CCccCCCccchHHHHHHHHHHHHHHHhh Confidence 444444333 2346677777654 5899999998521 1122 21112121111112222 21 111 Q ss_pred ccccc Q lcl|Aclame:pro 144 TASSL 148 (166) Q Consensus 144 y~~~~ 148 (166) -.+-- T Consensus 141 ~~~~~ 145 (145) T protein:vir:31 141 GAVID 145 (145) T ss_pred hhccC Confidence 11111 No 23 >protein:vir:1386 Length: 149 # NCBI annotation: Gp9 protein # Family: family:all:135 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612838;genbank:gi:20065972;genbank:GeneID:935787 Probab=59.07 E-value=0.085 Score=26.46 Aligned_cols=128 Identities=16% Similarity=0.165 Sum_probs=62.7 Q ss_pred Ccc-cccchhHHHHHHHHHHHhcCCHHHH----HHHHHHHHHHHHHHHHHHHHHhcCCCCCccCccccc---chhhhhhH Q lcl|Aclame:pro 1 MFE-IKAEDRSYLRVMEQLELLGLDRKTR----DKMLRRIGAQIAKTTRKNIRAQRDPDGSAWAKRKRG---RGKLLKGF 72 (166) Q Consensus 1 M~~-i~~d~~~~l~~~~~l~ll~L~p~~R----~~llr~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~~---k~kMl~~l 72 (166) |-+ |+++..++.+|...|..|..+ +.. +..|+.-|..+....+.++-. ..| +..+.+.+ .+.|-..+ T Consensus 1 Ma~~~~~~i~Gl~eL~~~l~~L~~~-~~~~k~~~~Al~~ga~~v~~~~k~~aP~--~~~--~~~~~~~~~~~~~~~~d~i 75 (149) T protein:vir:13 1 MSDGWEIKFEGLDDLIKTFEQLGTE-KENEDVEKSILKECGDLAKKTVAPLIHI--SDD--NSKSGRKGSRPPGHAANNI 75 (149) T ss_pred CCceeEEEeecHHHHHHHHHhcccH-HHHHHHHHHHHHHHHHHHHHHHHHhCCc--cCC--ccccccccccccchhhhcc Confidence 884 788888888888888866432 332 345666667777776666432 222 22222111 11122222 Q ss_pred HhhhhhhcccCCCeEEEEeCcc---HHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHH---------HHH Q lcl|Aclame:pro 73 TQKLKHFQRDNNRTLVVGWPSA---RGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAK---------RCA 140 (166) Q Consensus 73 ~~~~~~~~~~~~~~~~v~~~g~---~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk---------~Lr 140 (166) .. ..+....+...+.|||... ...++...-||= ..+.+.....+. ..++..+|. .|+ T Consensus 76 ~~-~~~~~~~g~~~~~VG~~~~~~~~~~y~~f~E~GT-~k~~a~pF~~pa---------~~~~~~~~~~~~~~~l~k~i~ 144 (149) T protein:vir:13 76 PE-PKIRKKKGNLQCVVGWEKSDNTPFYYMKMEEWGT-SERPPHHAFGKT---------NKILKRVYDNIAQKKYDNFVK 144 (149) T ss_pred ee-cccccccceeEEEeeccCCCCCccceeeeeccCc-cCCCCCccchHH---------HHHHHHHHHHHHHHHHHHHHH Confidence 11 1223334445577887543 336777777873 333322222111 112333332 333 Q ss_pred -Hhcc Q lcl|Aclame:pro 141 -ISIT 144 (166) Q Consensus 141 -~lgy 144 (166) .||. T Consensus 145 ~~lG~ 149 (149) T protein:vir:13 145 EKLGD 149 (149) T ss_pred HHhcC Confidence 4777 No 24 >protein:vir:93617 Length: 148 # NCBI annotation: putative structural component # Family: family:all:135 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449299;genbank:gi:157166047;interpro:IPR010064;interpro:IPR011693;uniprot:Q6H9U2;genbank:GeneID:5580439 Probab=57.96 E-value=0.062 Score=27.21 Aligned_cols=130 Identities=15% Similarity=0.076 Sum_probs=55.9 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCCCCc-------cCcc--cccchh Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTRDK----MLRRIGAQIAKTTRKNIRAQRDPDGSA-------WAKR--KRGRGK 67 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R~~----llr~ig~~lr~~~~~ri~~Q~~PDGt~-------w~pR--K~~k~k 67 (166) ||+|+++..++.+|...|..|. .....+ .+..-+..+....+.++ |..+. +..+ +.|. T Consensus 1 mm~~~~~i~Gldel~~~l~~L~--~~~~~~~~~~Al~~~a~~v~~~ak~~a-----P~~~g~l~~~i~~~~~~~~~g~-- 71 (148) T protein:vir:93 1 MIETLLDFSGLEDISRDLQLLS--GAENNRVLREATRAGANVLKEEVVSRA-----PVRRGKLRRNVVVLSRRSRDGG-- 71 (148) T ss_pred CcceeeeehhHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHHHhhC-----CCCcchhhhhceeccccccCCc-- Confidence 9999999999999999888663 333333 44455556766666653 43221 1111 1111 Q ss_pred hhhhHHhhhhhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHH-----HHh Q lcl|Aclame:pro 68 LLKGFTQKLKHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRC-----AIS 142 (166) Q Consensus 68 Ml~~l~~~~~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~L-----r~l 142 (166) +--.+.-.............+..+++..+.|+...-||=.. +.+.-..+ | ...++..++... .+. T Consensus 72 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~y~~f~E~GT~~-~pa~PFl~-------p--A~~~~k~~~~~~~~~~~~~~ 141 (148) T protein:vir:93 72 MESGVHIRGVNPDTGNSDNTMKADNPRNAFYWRFVEMGTVN-MPPHPFVR-------P--AFDVRSEQAAQVAIARMNRA 141 (148) T ss_pred eeeeeeecccccccccccceeecCCCCCcceeeeeccCCCC-CCCCcchh-------H--HHHHhHHHHHHHHHHHHHHH Confidence 00000000000011122233344455556667666777433 22211111 1 112333333332 222 Q ss_pred ccccccC Q lcl|Aclame:pro 143 ITASSLR 149 (166) Q Consensus 143 gy~~~~~ 149 (166) --+.-.| T Consensus 142 i~k~~~k 148 (148) T protein:vir:93 142 IDEVLRR 148 (148) T ss_pred HHHHhcC Confidence 1111111 No 25 >protein:vir:96105 Length: 193 # NCBI annotation: hypothetical protein ORF028 # Family: family:all:503 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294445;genbank:gi:149408342;genbank:GeneID:5237224 Probab=49.87 E-value=0.17 Score=24.84 Aligned_cols=96 Identities=11% Similarity=0.120 Sum_probs=32.4 Q ss_pred cCcccccchhhhhhHHhhhhhhcccCCCeEEEEeC--------------ccHHHHHHHHhcCcccccCcccchhhhHhhc Q lcl|Aclame:pro 58 WAKRKRGRGKLLKGFTQKLKHFQRDNNRTLVVGWP--------------SARGRVAYEHHHGIAQESGLSARKRQAKQQN 123 (166) Q Consensus 58 w~pRK~~k~kMl~~l~~~~~~~~~~~~~~~~v~~~--------------g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~ 123 (166) ..=+.. .+.|..| ..-...-+...+.|||. ..++.||++|+||.+++..+...... +. T Consensus 1 m~~~~~--~~~~~~~---~~~l~~l~~~~v~vGi~~~~~~~~~~~~~~G~~va~iAai~EfG~~I~~~~~~~~~~-~~-- 72 (193) T protein:vir:96 1 MSLRRD--SELIAAH---LQMLRAMRGRSVSAGWYSTARYPDKAGGSVGIQVARIARLNEYGGTIDHPGGTRYIR-DA-- 72 (193) T ss_pred Ceeccc--hHHHHHH---HHHHHHhcCCeEEEEEcCCCCCCCcccccccchHHHHHhHHHcCCccccCccceeee-ec-- Confidence 211111 1122222 22222234567788874 24789999999999988654322211 00 Q ss_pred CCCCCCCCCHHHHHHHHHhcccccc--------CCCCCCccCccccccccC Q lcl|Aclame:pro 124 EPRKTDPATREQAKRCAISITASSL--------RGDRKEAKSPLWHGYEKT 166 (166) Q Consensus 124 ~~~~~~pAt~~QAk~Lr~lgy~~~~--------~~~~k~~k~p~~~~~~~~ 166 (166) ...+.....++.+ -+|.... ...=|..=.|.+.+.... T Consensus 73 -~~~g~~~~~~~~k----~~~~~~~~~~~~~~v~IPaRPFlr~t~~~~~~~ 118 (193) T protein:vir:96 73 -IVRGRFVGVRFVR----NDFPGETEVTKPHRITIPARPFMRYAWNLFSAD 118 (193) T ss_pred -cccccccccceec----cCcceeeEeecceeccCCCcchhhhhHHHHHHH Confidence 0000000000000 0000000 000011111111111110 No 26 >protein:vir:3873 Length: 128 # NCBI annotation: putative head-tail joining protein # Family: family:all:135 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680490;swissprot:trembl:p94214;genbank:gi:22296530;interpro:IPR010064;uniprot:P94214;genbank:GeneID:951688 Probab=24.64 E-value=2.2 Score=18.76 Aligned_cols=126 Identities=11% Similarity=0.051 Sum_probs=61.7 Q ss_pred cccchhHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-ccCcccccchhhhhhHHhhhhhhcc Q lcl|Aclame:pro 4 IKAEDRSYLRVMEQLELLGLD-RKTRDKMLRRIGAQIAKTTRKNIRAQRDPDGS-AWAKRKRGRGKLLKGFTQKLKHFQR 81 (166) Q Consensus 4 i~~d~~~~l~~~~~l~ll~L~-p~~R~~llr~ig~~lr~~~~~ri~~Q~~PDGt-~w~pRK~~k~kMl~~l~~~~~~~~~ 81 (166) |+++..++.+|...|..|... .+.-+..+..-|..+....+.+ .|.++ .+.+. +-|-..+.- ..++.. T Consensus 1 m~v~i~Gl~el~~~l~~l~~~~~k~~~~al~~ga~~~~~~~k~~-----ap~~~~~~~~~----~h~~d~I~~-~~~k~~ 70 (128) T protein:vir:38 1 MGVKVTGDAELLANLNKLQFGVAKEARAAVRDGAQKFADKLKSN-----TPEWDGETDMS----GHLRDDIKL-SSVRET 70 (128) T ss_pred CccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCcCCCCccc----chhhhhhcc-cccccc Confidence 666666777777777766422 1223344555555565555433 34432 11111 111111111 122333 Q ss_pred cCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhcc Q lcl|Aclame:pro 82 DNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISIT 144 (166) Q Consensus 82 ~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy 144 (166) .+...+.|||....+.++...-||=. .+.+.....+..... ...|...-+..|++..- T Consensus 71 ~g~~~~~VG~~k~~~~y~~f~E~GT~-k~~a~pF~~pa~~~~----~~~~~~~~~~~l~k~i~ 128 (128) T protein:vir:38 71 SGLTEVDVGYGKDTGWRAHFPNSGTS-MQDPQHFIEETQEIM----RPVVIAAFLSHLKEGGM 128 (128) T ss_pred CceeEEEeeecCCCceEEeeeccCcc-CCCCCcchhHHHHHh----HHHHHHHHHHHHHhhcC Confidence 44555788987777788888999943 333322222111111 12344555556666554 No 27 >protein:vir:97088 Length: 157 # NCBI annotation: hypothetical protein # Family: family:all:2714 # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453568;genbank:gi:84662603;genbank:GeneID:5142503 Probab=24.58 E-value=1.8 Score=19.13 Aligned_cols=127 Identities=16% Similarity=0.185 Sum_probs=52.1 Q ss_pred cccccchhHHHHHHHHHHHhcCCHHHHHHHHH----HHHHHHHHHHHHHHHHhcCCCCCccCcccccchhhhhhHHhhhh Q lcl|Aclame:pro 2 FEIKAEDRSYLRVMEQLELLGLDRKTRDKMLR----RIGAQIAKTTRKNIRAQRDPDGSAWAKRKRGRGKLLKGFTQKLK 77 (166) Q Consensus 2 ~~i~~d~~~~l~~~~~l~ll~L~p~~R~~llr----~ig~~lr~~~~~ri~~Q~~PDGt~w~pRK~~k~kMl~~l~~~~~ 77 (166) |++++...++.+|.+.|+.| + ..-..+++ .-|..|+...+.++ |.+.| + |.+..+ T Consensus 1 m~~~~~~~d~s~l~~~l~~l--~-~~~~~v~R~A~~~ga~vv~dear~~a------------P~~tG--~----LkksI~ 59 (157) T protein:vir:97 1 MKFSIRSVDITGILAGLETV--V-EHSSDVVRTMTYESAVAVRESAKAFV------------NDETG--K----LRNNLY 59 (157) T ss_pred CeeEeecccHHHHHHHHHHh--H-HHHHHHHHHHHHHHHHHHHHHHHHhC------------CCCcc--h----hhhhee Confidence 66666555555556666655 2 22223444 44455677666554 34433 2 233332 Q ss_pred hh---cc--cCCCeEEEEeCccHHHHHHHHhcCcccccCcccchh----------------hhHhhcCCCCCCCCCHHHH Q lcl|Aclame:pro 78 HF---QR--DNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKR----------------QAKQQNEPRKTDPATREQA 136 (166) Q Consensus 78 ~~---~~--~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~----------------~~~~r~~~~~~~pAt~~QA 136 (166) +. .. ++.....|+++...+.++..+.||-........-.. +..-.-.|-+. +...|| T Consensus 60 ~~~~~~~s~~g~~~~~Vg~~~~~a~~g~~vEfG~~~~~~~~~~~~~~~~~~~~~~~t~~~~Pa~PFlRPA~d--~~k~~a 137 (157) T protein:vir:97 60 VAYSPEESVEGIQTYAVSWRKKAAPHGHLLEFGHWQTHAAYRDKDGQWYSSKVKLVNPKWIPAKPFLRPGYD--SVAMQI 137 (157) T ss_pred eeeccccCCCceEEEEEeecCCccceeeeeecCcccccccccCCcccccccccccCCCCcCCCCcccchHHH--HhHHHH Confidence 22 11 122223478888788888888888433211100000 00001111111 222222 Q ss_pred H-----HHHHhccccccCCCC Q lcl|Aclame:pro 137 K-----RCAISITASSLRGDR 152 (166) Q Consensus 137 k-----~Lr~lgy~~~~~~~~ 152 (166) . +|++..-.+ .+|.. T Consensus 138 ~~~~~~~l~k~I~e~-l~g~~ 157 (157) T protein:vir:97 138 PDIARAAGAKKYAEL-QRGDT 157 (157) T ss_pred HHHHHHHHHHHHHHH-hcCCC Confidence 2 222222111 12222 No 28 >protein:vir:194 Length: 149 # NCBI annotation: Gp10 # Family: family:all:135 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037704;genbank:gi:9634169;genbank:GeneID:1262536 Probab=21.58 E-value=1.3 Score=19.98 Aligned_cols=138 Identities=14% Similarity=0.112 Sum_probs=57.1 Q ss_pred CcccccchhHHHHHHHHHHHhcCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCCc-------cCcccccch-hhhh Q lcl|Aclame:pro 1 MFEIKAEDRSYLRVMEQLELLGLDRKTR--DKMLRRIGAQIAKTTRKNIRAQRDPDGSA-------WAKRKRGRG-KLLK 70 (166) Q Consensus 1 M~~i~~d~~~~l~~~~~l~ll~L~p~~R--~~llr~ig~~lr~~~~~ri~~Q~~PDGt~-------w~pRK~~k~-kMl~ 70 (166) ||+++++..++.+|...|..|.-..... +.-+..-|..+....++++ |..+. +...+..+. .+-. T Consensus 1 mm~~~~~i~Gl~~l~~~l~~l~~~~~~~~~~~al~~~a~~i~~~ak~~a-----P~~~g~l~~si~~~~~~~~~~~~~~~ 75 (149) T protein:vir:19 1 MIETSLDFSGLNDIAKDLEALSRAENNKVLRDATRAGAEVLKEEVIDRA-----PVRTGKLKKNVVVVTQKSRRRGEISS 75 (149) T ss_pred CcceeeehhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhC-----CCCchhhhhhccccccccccccceee Confidence 9999999999999998888775332222 3456666777777777654 32111 000010000 0000 Q ss_pred hHH-hhhhhhcccCCCeEEEEeCccHHHHHHHHhcCcccccCcccchhhhHhhcCCCCCCCCCHHHHHHHHHhccccccC Q lcl|Aclame:pro 71 GFT-QKLKHFQRDNNRTLVVGWPSARGRVAYEHHHGIAQESGLSARKRQAKQQNEPRKTDPATREQAKRCAISITASSLR 149 (166) Q Consensus 71 ~l~-~~~~~~~~~~~~~~~v~~~g~~~~IA~vHQ~G~~~~~~~~~~~~~~~~r~~~~~~~pAt~~QAk~Lr~lgy~~~~~ 149 (166) .+. +..... .......+..+.+....++...-||-.... +.-.. .| ...++..++...-..-++-.. T Consensus 76 ~v~~~~~~~~-~~~~~~~~~~~~~~~~~y~~f~E~GT~~~~-a~PF~-------~p--A~~~~k~~~~~~~~~~l~~~l- 143 (149) T protein:vir:19 76 GVHIRGVNPR-TGNSDNTMKANNPRNAFYWRFVELGTANMP-AHPFV-------RP--AYDTREEEAASVAIARMNQAI- 143 (149) T ss_pred cccccccccc-cccccceeecCCCCccceeeeeccCCCCCC-CCcch-------hH--HHHHHHHHHHHHHHHHHHHHH- Confidence 000 000011 111222233334444556666667743321 11111 11 112344444433222211110 Q ss_pred CCCCCcc Q lcl|Aclame:pro 150 GDRKEAK 156 (166) Q Consensus 150 ~~~k~~k 156 (166) .+.-.| T Consensus 144 -~k~~~k 149 (149) T protein:vir:19 144 -DEVLSK 149 (149) T ss_pred -HHHhcC Confidence 000000 Done!