Query lcl|Aclame:protein:vir:3366|NCBI_annot:tail tubular protein B|genbank:acc:NP_523337;swissprot:trembl:q8w5u3;genbank:gi:17570828;goa:Q8W5U3;uniprot:Q8W5U3;genbank:GeneID:927453 Match_columns 801 No_of_seqs 164 out of 263 Neff 8.4 Searched_HMMs 1612 Date Sat Nov 30 02:00:45 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_42 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_42_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:1543 Length: 801 # 100.0 4E-256 2E-259 1420.8 91.4 801 1-801 1-801 (801) 2 protein:vir:3366 Length: 801 # 100.0 6E-255 4E-258 1414.3 89.5 801 1-801 1-801 (801) 3 protein:vir:10452 Length: 794 100.0 2E-250 1E-253 1389.1 90.5 792 1-801 1-794 (794) 4 protein:vir:2203 Length: 794 # 100.0 1E-249 9E-253 1384.8 92.1 792 1-801 1-794 (794) 5 protein:vir:99677 Length: 794 100.0 2E-247 1E-250 1373.7 91.4 790 1-801 1-794 (794) 6 protein:vir:94583 Length: 792 100.0 1E-246 6E-250 1369.3 89.2 791 1-801 1-792 (792) 7 protein:vir:94713 Length: 785 100.0 5E-243 3E-246 1348.7 89.9 783 1-801 1-785 (785) 8 protein:vir:8887 Length: 808 # 100.0 4E-237 2E-240 1316.9 89.0 789 1-801 1-808 (808) 9 protein:vir:97014 Length: 800 100.0 2E-225 1E-228 1252.6 86.7 769 2-801 1-800 (800) 10 protein:vir:105647 Length: 800 100.0 3E-224 2E-227 1246.2 87.1 779 2-801 1-800 (800) 11 protein:vir:7021 Length: 803 # 100.0 2E-223 1E-226 1241.8 84.8 778 2-801 1-803 (803) 12 protein:vir:103341 Length: 806 100.0 2E-219 1E-222 1219.2 85.5 776 2-801 1-806 (806) 13 protein:vir:80253 Length: 777 100.0 3E-217 2E-220 1207.9 84.3 770 1-801 1-777 (777) 14 protein:vir:6326 Length: 826 # 100.0 4E-216 3E-219 1201.2 83.6 774 1-801 1-826 (826) 15 protein:vir:100022 Length: 976 100.0 1E-212 7E-216 1182.6 85.4 773 1-801 1-976 (976) 16 protein:vir:78957 Length: 826 100.0 2E-212 1E-215 1181.0 83.7 777 1-801 1-826 (826) 17 protein:vir:78703 Length: 905 100.0 4E-208 3E-211 1157.6 82.6 765 1-801 1-905 (905) 18 protein:vir:103790 Length: 768 100.0 4E-171 2E-174 955.0 76.6 727 1-798 1-768 (768) 19 protein:vir:95324 Length: 823 100.0 4E-161 3E-164 899.8 72.5 719 1-797 1-823 (823) 20 protein:vir:1778 Length: 680 # 100.0 2E-163 1E-166 913.1 57.6 538 1-557 1-680 (680) 21 protein:vir:7329 Length: 825 # 100.0 2E-156 1E-159 873.9 71.9 714 1-797 1-825 (825) 22 protein:vir:98487 Length: 681 100.0 8E-156 5E-159 870.8 72.5 662 1-796 1-681 (681) 23 protein:vir:107802 Length: 681 100.0 8E-156 5E-159 870.8 72.5 662 1-796 1-681 (681) 24 protein:vir:107423 Length: 681 100.0 8E-156 5E-159 870.8 72.5 662 1-796 1-681 (681) 25 protein:vir:102644 Length: 594 100.0 4E-135 2E-138 757.4 60.2 558 1-797 1-594 (594) 26 protein:vir:94602 Length: 1012 99.7 1.2E-15 7.7E-19 102.3 34.5 774 1-800 1-1012(1012) 27 protein:vir:80177 Length: 1027 99.6 4E-15 2.5E-18 99.5 28.8 750 1-801 1-936 (1027) 28 protein:vir:2625 Length: 715 # 99.2 1.1E-09 7.1E-13 69.6 43.3 635 1-798 1-715 (715) 29 protein:vir:95475 Length: 771 98.3 2E-06 1.2E-09 51.9 38.9 654 1-798 1-771 (771) 30 protein:vir:8837 Length: 513 # 98.2 2.9E-06 1.8E-09 51.0 39.5 482 1-800 1-513 (513) 31 protein:vir:3133 Length: 911 # 97.5 5.1E-05 3.2E-08 44.1 35.7 696 1-801 1-839 (911) 32 protein:vir:7329 Length: 825 # 97.5 6.2E-05 3.9E-08 43.6 31.3 613 64-801 1-743 (825) 33 protein:vir:105563 Length: 396 96.2 0.00084 5.2E-07 37.4 21.3 373 1-537 1-396 (396) 34 protein:vir:95324 Length: 823 95.7 0.0015 9.4E-07 36.0 32.0 655 64-801 1-741 (823) 35 protein:vir:108312 Length: 458 83.8 0.066 4.1E-05 27.1 33.0 436 194-793 1-458 (458) 36 protein:vir:105525 Length: 472 52.8 0.55 0.00034 22.0 33.9 425 189-728 1-472 (472) 37 protein:vir:2109 Length: 472 # 45.1 0.78 0.00048 21.2 32.2 426 218-728 1-472 (472) 38 protein:vir:177 Length: 472 # 43.6 0.84 0.00052 21.0 34.6 425 199-728 1-472 (472) 39 protein:vir:105428 Length: 472 28.4 1.7 0.0011 19.3 33.4 427 199-718 1-472 (472) No 1 >protein:vir:1543 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052111;swissprot:trembl:q9t105;genbank:gi:9634037;uniprot:Q9T105;genbank:GeneID:1262408 Probab=100.00 E-value=3.9e-256 Score=1420.81 Aligned_cols=801 Identities=97% Similarity=1.475 Sum_probs=782.0 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++++.....++++|+|+|+++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GvSqq~d~~r~~~q~~~~~N~~~~~~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~e~y~l~ 80 (801) T protein:vir:15 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) T ss_pred CceeeeecchhhcceecCcchHhhhhhHhhhhcceeccccCcccCCchheeeeecCCCCcccceeEEEEEeCCceEEEEE Confidence 99999999999999999999999999999999999999999999999999999998888788999999999999999999 Q ss_pred EeCCeEEEEeCCCcEEEEEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEeccCccc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~irv~~~~g~~~~v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) |++++||||+++|.+++|++..+|+.++++.++|+++|+||+|||+|++++|+++.+..+...+++..++++++++++|+ T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~y~~~~~~~~~l~~~~~aD~~fi~nr~~~~~~~~~~~~~~~~~~~~~alv~v~~~~yg 160 (801) T protein:vir:15 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) T ss_pred EcCCeEEEEccCCcEEEEecCCccccccCchhheeEEEEcCEEEEeeCCeeeecccCccccCccCCCCceEEEeeeccCc Confidence 99999999999999999999999999999999999999999999999999999999988888888889999999999999 Q ss_pred eeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCcceeEE Q lcl|Aclame:pro 161 RRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGL 240 (801) Q Consensus 161 ~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ti 240 (801) ++|+|++++...+.+++|+++.......++.+++|++|..+|.+..+....+...++|++...++.+++.++++.+.+++ T Consensus 161 ~t~~I~i~gs~~~~~t~~~gs~~~~~~~~s~~~ia~~l~~~~~~~~p~~~~~~~~~~w~~~~~~g~~~i~a~~~~~~~~~ 240 (801) T protein:vir:15 161 RRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGL 240 (801) T ss_pred eeEEEEeCCcceEEEEeccCcccchhhhcceeechHHHhhhhhhccCccceeccCccEEEEecCcEEEEeCCCCccccee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEEEE Q lcl|Aclame:pro 241 QTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALV 320 (801) Q Consensus 241 t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv 320 (801) +++|+.+++++.++++.++++++||..|++|++|+|+++.+++.++||++|+..+++|+||++++..++++.+||||.|+ T Consensus 241 ~t~dg~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~E~a~~g~~~~~~~~tmp~~lv 320 (801) T protein:vir:15 241 QTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALV 320 (801) T ss_pred eeccccCceeeeEEeecccceeeeeeecCCCcEEEEEecCCCccceEEEEEEcCCeeEEeecccccceeeeccccceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEecCCEEEEEecCCccccccccccccCCCccEEE Q lcl|Aclame:pro 321 RASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDV 400 (801) Q Consensus 321 ~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~i~~ 400 (801) +.++++|+++.++|++|.+||+++||+|||+|++|++|+||||||+|++|++|||||+||||||+++|++++.|||||++ T Consensus 321 ~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i~~ 400 (801) T protein:vir:15 321 RASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDV 400 (801) T ss_pred eeccceEEEeccccccccCCccccCCcccccCCCceEEEEEcceEEEeeCCeEEEEecCCccccccccccCCCCCccEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEE Q lcl|Aclame:pro 401 AVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRY 480 (801) Q Consensus 401 ~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~ 480 (801) +++++++++|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.|+|+.+|++++|+|++|+|++++|| T Consensus 401 ~~~~~~~~~i~~~v~~~~~L~i~t~~~q~~ls~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~r~ 480 (801) T protein:vir:15 401 AVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRY 480 (801) T ss_pred EecCCcceeeEEEeecCCcEEEEecCcEEEEcCCCcccceeEEEEEEEeeeccCCCCceEeCCeEEEEecCCCeeEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceEEEE Q lcl|Aclame:pro 481 YAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFA 560 (801) Q Consensus 481 ~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~~~ 560 (801) +++++.+|+|++.|||+|++|||++++.+++++++|+++++|+++++|+|++|+|||+++||+|+|||||+++|+++++| T Consensus 481 ~~~~~~~d~y~a~Dlt~~~~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g~~~~~~ 560 (801) T protein:vir:15 481 YAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFA 560 (801) T ss_pred EeecccccceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEecCCCceEEEeeEEEEcCCCEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCceEEE Q lcl|Aclame:pro 561 AQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSV 640 (801) Q Consensus 561 ~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~ 640 (801) +...+|+||++|+|+++++++||.+..++.+...+.+++||||+.++++++.++++.+..++...+.++|+.|++|+++. T Consensus 561 ~~~~~d~l~~~v~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~ 640 (801) T protein:vir:15 561 AQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSV 640 (801) T ss_pred EEecCCEEEEEEEecCcEEEEEEEEccccccCCCcceeeeeeeeeeEeeccceeccCceecccccccccccccccceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEeecc Q lcl|Aclame:pro 641 VFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDS 720 (801) Q Consensus 641 v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~t 720 (801) +++||.+++..++.+++...+++++++++++++|+|||+|+++++++||+++.++++++.+.+.++|+||||++|++.+| T Consensus 641 v~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~r~~~~~~~t 720 (801) T protein:vir:15 641 VFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDS 720 (801) T ss_pred EEeCCceeeeeeecCcccCcceEEEcCCCCCcEEEEeeeeeEEEEecceEEeccCCCCCceeeeeccEEEEEEEEEeccC Confidence 99999999998888898888999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEeccccC Q lcl|Aclame:pro 721 GAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRSSG 800 (801) Q Consensus 721 g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r~rr 800 (801) |.|.+.|++.+++..+...+.+++.+.+..+.|++.+|.++||+.+|+++.+|+|+|++|+||+|+||+|||+||+|+|| T Consensus 721 g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvlsi~~e~~y~~r~~~ 800 (801) T protein:vir:15 721 GAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRSSG 800 (801) T ss_pred cceEEEECCcccccceeecCcccccccccccccccccceEEEEEeecCceEEEEEEECCCCcEEEEEEEEEEEEeccccC Confidence 99999999999998899999999999999999999999999999999999999999999999999999999999999999 Q ss_pred C Q lcl|Aclame:pro 801 I 801 (801) Q Consensus 801 v 801 (801) | T Consensus 801 ~ 801 (801) T protein:vir:15 801 I 801 (801) T ss_pred C Confidence 9 No 2 >protein:vir:3366 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523337;swissprot:trembl:q8w5u3;genbank:gi:17570828;goa:Q8W5U3;uniprot:Q8W5U3;genbank:GeneID:927453 Probab=100.00 E-value=6.2e-255 Score=1414.26 Aligned_cols=801 Identities=100% Similarity=1.503 Sum_probs=780.6 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++++......+++|+|+|+++|+|+|+ T Consensus 1 M~~i~~~~~nl~~GvSqq~d~~r~~~q~~~~~N~~~~~~gG~~rRpGt~~va~~~~~~~~~~~~~~~~~~r~~~~~y~l~ 80 (801) T protein:vir:33 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) T ss_pred CceeEeeccceecceeccchhHhhhhhHhhhhcceeecccCcccCchhHhhhhhcCCCccccceEEEEEEeCCceEEEEE Confidence 99999999999999999999999999999999999999999999999999999998877788999999999999999999 Q ss_pred EeCCeEEEEeCCCcEEEEEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEeccCccc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~irv~~~~g~~~~v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) |++++||||+++|.+++|++..+|+.++++.++|+++|+||+|||+|++++|++..+..+...+++.+++++++++++|+ T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~y~~~~~~~~~l~~~t~aD~~fi~nr~~~p~~~~~~~~~~~~~~~~~~li~v~~~~yg 160 (801) T protein:vir:33 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) T ss_pred EcCCeEEEEccCCcEEEEecCCcceeecCcchheEEEEEcCEEEEeeCCeeecccCCcccccccCCCcceEEEEeecccc Confidence 99999999999999999999999999999999999999999999999999999998877777788889999999999999 Q ss_pred eeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCcceeEE Q lcl|Aclame:pro 161 RRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGL 240 (801) Q Consensus 161 ~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ti 240 (801) ++|+|++++...+++++++++....+.+++.+++|++|..++.+..+....+...++|.+...++.+++.++++...+++ T Consensus 161 ~t~~I~i~gs~~~~~~~~~gs~~~~v~~~s~~~~A~~l~~~~~~~~~~~~~~~~~~~w~~~~~~g~~~i~~p~~~~~~~i 240 (801) T protein:vir:33 161 RRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGL 240 (801) T ss_pred eEEEEEECCcceEEEEeeccccccccccccchhhhhhhhhhhhccCccceeeecCceEEEEecCeEEEEecCCCcccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999 Q ss_pred EEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEEEE Q lcl|Aclame:pro 241 QTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALV 320 (801) Q Consensus 241 t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv 320 (801) ++.++..++++.++++.++++++||.++++|++|+|.++.+++.++|||+|+..+++|+||+++|...+++.++|||.|+ T Consensus 241 tt~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~g~~~~~~~~tmp~~l~ 320 (801) T protein:vir:33 241 QTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALV 320 (801) T ss_pred cccCCccceeEEEEeecccceeeeeeecCCCcEEEEEecCCCcccceEEEEEcCCcEEEEeeccccceeeeecccceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEecCCEEEEEecCCccccccccccccCCCccEEE Q lcl|Aclame:pro 321 RASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDV 400 (801) Q Consensus 321 ~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~i~~ 400 (801) +.++++|+|+.++|++|.+||+++||+|||+|+||++|+||||||+|++|++|||||+||||||+++|++++.|||||++ T Consensus 321 ~~~~~tf~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i~~ 400 (801) T protein:vir:33 321 RASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDV 400 (801) T ss_pred EccCceEEecccCccccccCCccccCcccccCCCceEEEEEcceEEEeeCCeEEEEecCCccccccccccCCCCCccEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEE Q lcl|Aclame:pro 401 AVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRY 480 (801) Q Consensus 401 ~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~ 480 (801) +++++++++|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.++|+.+|++++|+|++|+|++++|| T Consensus 401 ~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~r~ 480 (801) T protein:vir:33 401 AVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRY 480 (801) T ss_pred EecCCcceeeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeecccCCCCceEecCeEEEEecCCCeeEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceEEEE Q lcl|Aclame:pro 481 YAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFA 560 (801) Q Consensus 481 ~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~~~ 560 (801) +++++.+|+|++.|||+|++|||++++.+++++++|+++++|+++++++||+|+||++++||+|+|||||+|+|+++++| T Consensus 481 ~~~~~~~d~y~~~Dlt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g~~~~~~ 560 (801) T protein:vir:33 481 YAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFA 560 (801) T ss_pred EeecccccceehhhHHHHHHHhcCCceEEEEEcCCCCeEEEEEecCCCEEEEEEEecCCCceEEEeeEEEEcCCCEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCceEEE Q lcl|Aclame:pro 561 AQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSV 640 (801) Q Consensus 561 ~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~ 640 (801) +...+|+||++|+|++++++|||.+..+.++....+|++||||+.++++++++|++++..+...++.++|+.|+||+++. T Consensus 561 ~~~~~d~l~~vv~r~~~~~le~~~~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~~eg~~v~ 640 (801) T protein:vir:33 561 AQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSV 640 (801) T ss_pred EecCCCEEEEEEEcCCcEEEEEEEEeeccccCCCccceEEeecceEEEecccceecCccccccccccccCCccccceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEeecc Q lcl|Aclame:pro 641 VFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDS 720 (801) Q Consensus 641 v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~t 720 (801) +++||.+++..++..++..+.++++|+++++++|+|||+|+++++++||+++.++++++.+.+.++|+||||+++++.+| T Consensus 641 ~~~dG~v~~~~~~~~~~~~~~~l~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~~~~~~~t 720 (801) T protein:vir:33 641 VFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDS 720 (801) T ss_pred EEeCCceEeeeeccccccCceeEEecCCCCCCEEEEeeeeeEEEEeCceEEeccCCCCceeeeeeccEEEEEEEEEeecC Confidence 99999999988888888889999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEeccccC Q lcl|Aclame:pro 721 GAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRSSG 800 (801) Q Consensus 721 g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r~rr 800 (801) |.|.+.|++.+++..+...++++++..+..+.|++++|.++||+.+|+++.+|+|+|++|+||+|+||+|||+||+|+|| T Consensus 721 g~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvl~i~~eg~y~~r~~~ 800 (801) T protein:vir:33 721 GAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRSSG 800 (801) T ss_pred cceEEEECCcccceeeeecccccccccccccccccccceEEEEeeccCceEEEEEEeCCCCCEEEEEEEEEEEEeccccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred C Q lcl|Aclame:pro 801 I 801 (801) Q Consensus 801 v 801 (801) | T Consensus 801 ~ 801 (801) T protein:vir:33 801 I 801 (801) T ss_pred C Confidence 9 No 3 >protein:vir:10452 Length: 794 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848299;genbank:gi:30387490;genbank:GeneID:1733952 Probab=100.00 E-value=2.4e-250 Score=1389.12 Aligned_cols=792 Identities=69% Similarity=1.158 Sum_probs=759.6 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++++..+....+++.+++|++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GvSqq~D~~Ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~rd~~e~~~v~ 80 (794) T protein:vir:10 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTLGDNGALGQAPYIHLINRDENEQYYAV 80 (794) T ss_pred CcceeeecchhhcccccCCchHHhhhhHhhhhcceeeeccCcccCcchhhheeccCCCccccceeeeEEecCCCceEEEE Confidence 99999999999999999999999999999999999999999999999999999998766666677788889999999999 Q ss_pred EeCCeEEEEeCCCcEEEEE--ccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEeccCc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVR--GDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQ 158 (801) Q Consensus 81 ~~~~~irv~~~~g~~~~v~--~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~ 158 (801) |++++||||+++|.+++|. +..+|+.+++++++|+|+|+||+|||+|++++|++..+..+...+++..+++++|++|+ T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~~~Y~~aa~~~~~l~~~q~aD~~fivn~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) T protein:vir:10 81 FTGTGIRVFDLAGNEKQVRYPNGSNYIKTANPRSDLRMVTVADYTFIVNRNVVVQKDPNSVNLANYNPKQDGLINIRGGQ 160 (794) T ss_pred EeCCeEEEEEcCCcEEEEEcCCCCcceecCCCcceEEEEEEcCEEEEEcCCeeeeeeccccccCCCCCCccEEEEecccc Confidence 9999999999999888774 67789988899999999999999999999999999999887777888899999999999 Q ss_pred cceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCccee Q lcl|Aclame:pro 159 YGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVW 238 (801) Q Consensus 159 y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 238 (801) |+++|++++++...+++++|+++.+.++...+.++++..|..++.+.. .+|.+...++++++.++++..++ T Consensus 161 y~r~y~i~i~~~~~at~~tpdgt~~~~~~~~s~~~ia~~L~~~l~a~~---------~g~t~~~~g~~i~i~a~s~~~~~ 231 (794) T protein:vir:10 161 YGRELIVHINGKDVATYKIPDGSKPEHVNNTDAQWLAERLAKQMRINL---------SGWTVNVGQGFIHVTAPSGQQID 231 (794) T ss_pred cceEEEeccCCcceeEEEecCCCCcccceecchhhhhhhhhhhhhccc---------CCceEEeCCeEEEEEeccCceec Confidence 999999999999999999999999999999999999999988776542 46788888999999999988889 Q ss_pred EEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEE Q lcl|Aclame:pro 239 GLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWA 318 (801) Q Consensus 239 tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~ 318 (801) ++++.++..++++.++.++++++++||+.|++|++++|.++.+++.++||++|+...++|+||++++...+++.+||||. T Consensus 232 t~s~~~~~~~~~~~~v~~~~~~~~~lp~~~~~G~~v~i~~~~~~~~~~yyv~~~~~~~~w~E~~~~g~~~~~~~~tmP~~ 311 (794) T protein:vir:10 232 SFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTENQVLLETMPHA 311 (794) T ss_pred cccccCCcCcceeEEEEeccCcceecccCCCCCcEEEEEeCCCCCcceeEEEEEcCCcEEEEecccceeEEEecccceeE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEecCCEEEEEecCCccccccccccccCCCccE Q lcl|Aclame:pro 319 LVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPI 398 (801) Q Consensus 319 lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~i 398 (801) |+++++++|+++.++|++|.+||+++||.|||+|++|++|+||||||+|++|++|||||+||||||+++|++++.||||| T Consensus 312 l~r~~~~t~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~I 391 (794) T protein:vir:10 312 LVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSNDDPI 391 (794) T ss_pred EEEeccceEEeeecccccccccccccCccCcccCCCccEEEEEcceEEEeeCCeEEEEecCCcccccccccccCCCCccE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEE Q lcl|Aclame:pro 399 DVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSIN 478 (801) Q Consensus 399 ~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~ 478 (801) +++++++++++|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.|+|+.+|++++|+|++|+|++++ T Consensus 392 ~~~~ss~~~~~i~~~v~~~~~L~i~T~~~q~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~ 471 (794) T protein:vir:10 392 DVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSRSVELNLTTQFDVQDRARPYGIGRNVYFASPRSSYTSIH 471 (794) T ss_pred EEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCeeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceEE Q lcl|Aclame:pro 479 RYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTV 558 (801) Q Consensus 479 ~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~ 558 (801) ||+++++.+|+|++.|||+|++|||++++..++++++++.++||+++++|+|++|+|||+++||+|+|||||+|+|.+++ T Consensus 472 r~~~~~~~~d~y~a~Dlt~~~~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g~~~~ 551 (794) T protein:vir:10 472 RYYAVQDVSSVKNSEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQV 551 (794) T ss_pred EEeeeccccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeEEEEEcCCcEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCceE Q lcl|Aclame:pro 559 FAAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRV 638 (801) Q Consensus 559 ~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~ 638 (801) +|+...+|+||++|+|+++++++||.+.++..+...++|++||||+++++..+++|++.++.+...+++++|+.|++|++ T Consensus 552 ~~~~~~~d~l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~g~~~~eg~~ 631 (794) T protein:vir:10 552 LACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKI 631 (794) T ss_pred EEEEecCCeEEEEEEeCCCEEEEEEEEeecCCCCCCccceeeeecceEEEecCcccccccccceEEcccccCcccccccE Confidence 99988999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEee Q lcl|Aclame:pro 639 SVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYE 718 (801) Q Consensus 639 v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~ 718 (801) +.+.+||.......+..++....++++|+++++++|+|||+|+++++++||+++.+++++..+....+|+||||++++|. T Consensus 632 v~~~adg~~~~~~~~~~~~~g~~~l~i~~~~~a~~v~vGl~y~s~~~~~~~~i~~~~~~~~~~~~~~gr~~l~r~~~~~~ 711 (794) T protein:vir:10 632 TVLEPDGKITVFEQPTSGWQSDPWLRLSGNLEGREVFIGFNINFVYEFSKFLIKQTTDDGSTSTEDIGRLQLRRAWVNYE 711 (794) T ss_pred EEEecCCceeeeeeeeeeeecceEEEecCCCCCceEEEeeeeeEEEEecceEEEccCCCcceeeeccccEEEEEEEEEee Confidence 99999999887777777777778999999999999999999999999999999999998888889999999999999999 Q ss_pred cceeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 719 DSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) Q Consensus 719 ~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r~ 798 (801) +||+|.++|++.+++..+.+.+.++++..+..+.+++.+|.++||+.+|+++.+|+|+|++|+||+|+||+|||+||+|+ T Consensus 712 ~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvlsi~~eg~y~~r~ 791 (794) T protein:vir:10 712 DSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRS 791 (794) T ss_pred ccccEEEEEcCCccccceeeccceeccccccccccccccceEEEEecccCceEEEEEEECCCCceEEEEEEEEEEEeccc Confidence 99999999999988877889999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCC Q lcl|Aclame:pro 799 SGI 801 (801) Q Consensus 799 rrv 801 (801) ||| T Consensus 792 ~~v 794 (794) T protein:vir:10 792 SGI 794 (794) T ss_pred cCC Confidence 999 No 4 >protein:vir:2203 Length: 794 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_042000;swissprot:sw:p03747;genbank:gi:9627472;uniprot:P03747;genbank:GeneID:1261024 Probab=100.00 E-value=1.5e-249 Score=1384.75 Aligned_cols=792 Identities=69% Similarity=1.167 Sum_probs=763.4 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++|+++..+....++++|+|+++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GvSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~~~y~l~ 80 (794) T protein:vir:22 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) T ss_pred CceeeeecchhhcccccCCchHHhhhHHhhhhcceeeccCCceeCCchHhhhhhcccCCCCCccEEEEEEeCCCcEEEEE Confidence 99999999999999999999999999999999999999999999999999999988776677789999999999999999 Q ss_pred EeCCeEEEEeCCCcEEEEE--ccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEeccCc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVR--GDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQ 158 (801) Q Consensus 81 ~~~~~irv~~~~g~~~~v~--~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~ 158 (801) |++++||||+++|.++.|. ...+|+.++++..+|+++|+||+|||+|++++|+++.+..+..|+++.+++++++++++ T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~~~~~~p~~~~~~~~~~~~~~~~~g~v~v~~g~ 160 (794) T protein:vir:22 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) T ss_pred EcCCeEEEEecCCcEEEeecCCCccceecCCCcccEEEEEEcCEEEEEcCCeeeeEeeccccCCCCCCCceEEEEccCCc Confidence 9999999999999988875 56788888889999999999999999999999999999999999999999999999999 Q ss_pred cceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCccee Q lcl|Aclame:pro 159 YGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVW 238 (801) Q Consensus 159 y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 238 (801) |+++|++++++...+++++|+++.+.+...++.++|+.+|..++.+. ..+|.+...++++++.++++..++ T Consensus 161 y~~ty~v~I~~~~~a~~~~p~gt~~~~~~~~~~~~ia~~L~~~l~~~---------~~~~t~~~~~~~~~i~a~~~~~~~ 231 (794) T protein:vir:22 161 YGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTN---------LSDWTVNVGQGFIHVTAPSGQQID 231 (794) T ss_pred cceeEEEEeccCcceEEEEcCCCccccceeechhhhhhhhhhhheec---------cccceEEeCCceEEEEEcCCceEE Confidence 99999999999999999999999999999999999999998776542 356788888889999999999999 Q ss_pred EEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEE Q lcl|Aclame:pro 239 GLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWA 318 (801) Q Consensus 239 tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~ 318 (801) ++++.++.+++++.+..+.++++++||+.|++|++++|.++.++..|+||++|+..++.|+||++|+...+++.+||||. T Consensus 232 ~~t~~~g~~~t~~~~~~~~~~~~~~lp~~~~~G~~v~i~~~~~~~~~~Y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p~~ 311 (794) T protein:vir:22 232 SFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHA 311 (794) T ss_pred EEeeecccCcceeEEEEeccccceeccccCCCCeEEEEEeCCCCCcceeEEEEeccceEEEEeeeccceeeecccceeeE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEecCCEEEEEecCCccccccccccccCCCccE Q lcl|Aclame:pro 319 LVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPI 398 (801) Q Consensus 319 lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~i 398 (801) |+++++++|+++..+|++|.+||+++||.|||+|++|++|+||||||+|++|++|||||+||||||+++|++++.||||| T Consensus 312 lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i 391 (794) T protein:vir:22 312 LVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPI 391 (794) T ss_pred eeeccCCcEEEeeccccccccCccccCCcceecCCCcceEEEEcceEEEecCCeEEEEccCCccccccccCcCCCCCccE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEE Q lcl|Aclame:pro 399 DVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSIN 478 (801) Q Consensus 399 ~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~ 478 (801) +++++++++++|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.++|+.+|++++|+|++|+|++++ T Consensus 392 ~~~~ss~~~~~i~~~v~~~~~L~i~t~~~e~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~ 471 (794) T protein:vir:22 392 DVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIH 471 (794) T ss_pred EEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEeeccCCCCceEeCCeEEEEecCCCeeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceEE Q lcl|Aclame:pro 479 RYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTV 558 (801) Q Consensus 479 ~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~ 558 (801) ||+++++.+|+|++.|||+|++|||+|++.+++++++++.++||+++++|+|++|+||++++||+|+|||||+|+|.+++ T Consensus 472 r~~~~~~~~d~y~~~Dlt~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g~~~~ 551 (794) T protein:vir:22 472 RYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQV 551 (794) T ss_pred EeEeeecccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceeEEeeEEEEcCCCEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCceE Q lcl|Aclame:pro 559 FAAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRV 638 (801) Q Consensus 559 ~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~ 638 (801) +|+...+|+||++|+|+++++++||.+.++..+.+.+.|++||||+..+...+++|++.++.+...++..+|+.|++|++ T Consensus 552 ~~~~~~~d~l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~g~~~~~~~~t~~~~~~~~g~~~~~g~~ 631 (794) T protein:vir:22 552 LACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKI 631 (794) T ss_pred EEEEecCCEEEEEEEeCCCEEEEEEEEeeccccCCCccceeeeeeeEEEeeccceeecCCcceEEEcccccCcccccceE Confidence 99998999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEee Q lcl|Aclame:pro 639 SVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYE 718 (801) Q Consensus 639 v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~ 718 (801) +.+.+||.+.....+..++...++++|++++++++|+|||+|+++++++||+++.++++++.+.+..+|+||+|++++|. T Consensus 632 v~~~~dg~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~~~~~~~~~~~grl~l~r~~~~~~ 711 (794) T protein:vir:22 632 TVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYE 711 (794) T ss_pred EEEEcCCceeeceeeeeeeeccceEEeCCCCCCcEEEEeeeeeEEEEecceEEEecCCCccceeeecceEEEEEEEEEec Confidence 99999999988887877888888999999999999999999999999999999999999999999999999999999999 Q ss_pred cceeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 719 DSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) Q Consensus 719 ~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r~ 798 (801) +||+|.+++++.+++..+.+.+.+++++.+..+.+++.++.++||+.+|+++.+|+|+|+.|+||+|++|+|||+||+|+ T Consensus 712 ~tg~~~v~v~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~~~~~~~~~v~i~~d~p~P~tvlsi~~eg~y~~r~ 791 (794) T protein:vir:22 712 NSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRS 791 (794) T ss_pred cccceEEEEcCCCcccceeecCceecccccccCcccccCceEEEEecccCceEEEEEEECCCCCEEEEEEeEEEEEeccc Confidence 99999999999888888889999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCC Q lcl|Aclame:pro 799 SGI 801 (801) Q Consensus 799 rrv 801 (801) ||| T Consensus 792 ~~v 794 (794) T protein:vir:22 792 SGI 794 (794) T ss_pred cCC Confidence 999 No 5 >protein:vir:99677 Length: 794 # NCBI annotation: Tail tubular protein B # Family: family:all:825 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249591;genbank:gi:68299742;genbank:GeneID:3799992 Probab=100.00 E-value=1.6e-247 Score=1373.66 Aligned_cols=790 Identities=52% Similarity=0.900 Sum_probs=753.8 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+++|+||++||||++||++++++..++.++|||+|+|+++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GvS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~f~~~~~~~y~l~ 80 (794) T protein:vir:99 1 MALISQSIKNLKGGISQQPDILRYSDQGSKQINGFSSEVEGLQKRPPSVHIKRLTDQFGLGQKPYCHIINRDEVERYAVF 80 (794) T ss_pred CceeeeecchhhcceecCCchHHhhhhHhhhhcceeeeccCcccCCccceeeeecCCCCCccccEEEEEEeCCCceEEEE Confidence 99999999999999999999999999999999999999999999999999999998888888999999999999999999 Q ss_pred EeCCeEEEEeC-CCcEEEEEc--cCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEeccC Q lcl|Aclame:pro 81 FTGEDIKVFDL-DGKEYQVRG--DRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGG 157 (801) Q Consensus 81 ~~~~~irv~~~-~g~~~~v~~--~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 157 (801) |++++||||++ +|.+++|.. ..+|+.+++++.+|+|+|+||+|||+|++++|+++.+..+...+.+..+++++++++ T Consensus 81 f~~~~irv~~~~~g~~~~v~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g 160 (794) T protein:vir:99 81 FTGSNIRVFDLFTGDEKTVNAPNGLSYVSSSNPRKDLRMVTVADYTFILNRNVATAQGTTNTPSGLAPFGHFGLVVIRGG 160 (794) T ss_pred EcCCeEEEEECCCCeEEEeeccccccccccCCccceeeEEEEccEEEEEcCCeeeeEeeeeccccCcCCCceEEEEeccC Confidence 99999999986 688888764 467888888999999999999999999999999998777767778889999999999 Q ss_pred ccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCcce Q lcl|Aclame:pro 158 QYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNV 237 (801) Q Consensus 158 ~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 237 (801) +|+++|++++++..++++.||+++.+.....++.++++.++...+.. .+|.+...++.+++.++++... T Consensus 161 ~y~~~y~v~i~gs~ta~~~tp~~~~~~~~~~~s~~~ia~~l~~~l~~-----------~g~~v~~~~g~~~i~~~~~~~v 229 (794) T protein:vir:99 161 QYGRTYRIKVNGSVEASFETPLGDQVAHAKQIDIAYIIDQLAAGLIN-----------KGWAVTKGSGYFYFSKSGSVII 229 (794) T ss_pred CCCceEEEEecCCcccceeeccCcccccccccchhhhhhhhHhhhhc-----------ccceEEeCCeEEEEEecCCcee Confidence 99999999999999999999999999999999999999999876643 3577888899999999999999 Q ss_pred eEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccE Q lcl|Aclame:pro 238 WGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPW 317 (801) Q Consensus 238 ~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~ 317 (801) ++++++++.+++.+....+.++++++||+.||+|++|+|.+..+.++++||++|+.+.++|+||++++...+++.+|||| T Consensus 230 ~t~s~~~g~~~t~~~~~~~~v~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p~ 309 (794) T protein:vir:99 230 NSLEVEDGYNGQLAWGIINDVQKTTQLPVYAPNNYIIRVSGDPTLNQDDYYVRFDASRNVWTECPAPNIKADYNKATMPH 309 (794) T ss_pred EEEEeecCCCCceeeEEeeeccceeecccCCCCCeEEEEeccCCCCCCceEEEEEcCCceEEeeccceeecceeccceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEecCCEEEEEecCCccccccccccccCCCcc Q lcl|Aclame:pro 318 ALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDP 397 (801) Q Consensus 318 ~lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~ 397 (801) .+++.++++|+++..+|++|.+||+++||.|||+|++|++|+||||||+|+++++|||||+||||||+++|++++.|||| T Consensus 310 ~~v~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~is~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~ 389 (794) T protein:vir:99 310 VLIREADGTFTFKQADWTHRAAGDDETNPYPSFIGNSINDIFFFRNRLGFLSGENVILSGSGNYFNFFPESVAVLTDTDP 389 (794) T ss_pred EEeccCCCceeEeeccccccccCCcccCCCccccCcceeEEEEEeeeEEEecCCeEEEEecCCccccccccccCCCCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEE Q lcl|Aclame:pro 398 IDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSI 477 (801) Q Consensus 398 i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v 477 (801) |+++++++++++|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.++|+.+|++++|+|++|+|+++ T Consensus 390 I~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v 469 (794) T protein:vir:99 390 IDVAVSTNRISILKYAVPFSEELILWSDQAQFVLSSDGGLTPTTIRLDLTTEFEVTEQARPYGIGRGVYFVSPRAKFSSV 469 (794) T ss_pred EEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEeeccCCCCceEeCCeEEEEecCCCeeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceE Q lcl|Aclame:pro 478 NRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVT 557 (801) Q Consensus 478 ~~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~ 557 (801) +||+++++.+|+|++.|||+|++|||+|++++++++++++.+++|+++++|+|++|+|+++++||+|+|||||+|+|+++ T Consensus 470 ~r~~~~~~~~d~y~a~Dlt~~~~hl~~~~~~~~~a~~~~~~~~v~~~~~~g~l~~~~y~~~~~eq~v~aW~~~~~~g~~~ 549 (794) T protein:vir:99 470 RRFYAVQDVTQVKNAEDISAHVPYYVENGVFKMSGSSTENFLTILTEGNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCR 549 (794) T ss_pred EEeeeeccccCceehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeEEEEEcCCCeE Confidence 99998999999999999999999999999999988888888888899999999999999999999999999999999999 Q ss_pred EEEEEEcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCce Q lcl|Aclame:pro 558 VFAAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGR 637 (801) Q Consensus 558 ~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~ 637 (801) ++|+..++|+||++|+|++++++|||.+.+++.+...+.+++||||+..++....+++.....+...++.++|+.|++|+ T Consensus 550 ~~~~~~~~d~l~~~v~r~~~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~g~ 629 (794) T protein:vir:99 550 VLCCDMIGAVMHLIIDSPSGVLMEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSYNDDDFKTRVKLKDIYGSTPANGQ 629 (794) T ss_pred EEEEEEcCCEEEEEEEeCCCEEEEEEEeeeCCCCCCCcccceeeeeeeeeeecccccccCcceeEEeccccccccccCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCceeecccccccc-ccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEE Q lcl|Aclame:pro 638 VSVVFPDGKIVEIDQPINGW-SSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVN 716 (801) Q Consensus 638 ~v~v~~dG~~~~~~~~~~~~-~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~ 716 (801) ++.+++||.++...++...+ .+.+.+++|+++++++|+|||+|+++++++||+++.+++.++.+....+|+||||++|+ T Consensus 630 ~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~~~g~~~~~~~gr~~l~r~~~~ 709 (794) T protein:vir:99 630 YVFISLGGVTFTFDPPAGGWQANDGLIEFDGDLRGTKFFVGEAYTFLYEFSKFLIKTTDTADGVATEDIGRLQLRRAWVN 709 (794) T ss_pred eEEEEeCCceeeeecccceEecCccEEEecCCCCCcEEEEeeeeeEEEeecceEEeecCCCCceeeeccceEEEEEEEEE Confidence 99999999988766554443 36678999999999999999999999999999999888888888889999999999999 Q ss_pred eecceeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEec Q lcl|Aclame:pro 717 YEDSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLR 796 (801) Q Consensus 717 ~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~ 796 (801) +.+||+|.+.+++.+++..+.+.+.+++++.+..+.+|+++|+++||+.+|+++.+|+|+|+.|+||+|+||+|||+||+ T Consensus 710 ~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvlsi~~e~~y~~ 789 (794) T protein:vir:99 710 YDKSGNFRVEVNNQGRTFTYNMTGNRLSTNELILGDESLDTGQFRYAVSGNATQVTVSLISDTPNPLSIIGGGWEGYYVR 789 (794) T ss_pred eecccceEEEECCCccceeeeccccccccccccccccccccceEEEEecccccceEEEEEECCCCCEEEEEEEEEEEEec Confidence 99999999999999999888899999999999999999999999999999999999999999999999999999999999 Q ss_pred cccCC Q lcl|Aclame:pro 797 RSSGI 801 (801) Q Consensus 797 r~rrv 801 (801) |+||| T Consensus 790 r~~~v 794 (794) T protein:vir:99 790 RSSGI 794 (794) T ss_pred cccCC Confidence 99999 No 6 >protein:vir:94583 Length: 792 # NCBI annotation: Tubular tail protein B # Family: family:all:825 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919014;genbank:gi:119637778;genbank:GeneID:5179343 Probab=100.00 E-value=9.8e-247 Score=1369.30 Aligned_cols=791 Identities=63% Similarity=1.077 Sum_probs=750.6 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+||++||||++||+.++++..+..+++||+|+|+++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GiSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~q~y~l~ 80 (792) T protein:vir:94 1 MALISQSVKNLKGGISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSAEQYYVV 80 (792) T ss_pred CcceeeecchhhcceecCcchHHhhhhhhhhhcceeeeccccccCChhHHHHhhhcCCCCCcccEEEEEEeCCCceEEEE Confidence 99999999999999999999999999999999999999999999999999999998888888999999999999999999 Q ss_pred EeCCeEEEEeCCCcEEEEEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEeccCccc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~irv~~~~g~~~~v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) |+++++|||+.+|.++.+++..+|+.+.++.++|+++|+||+|||+|++++|+++.|..+..| +.+++++++++++|+ T Consensus 81 f~~~~~rv~~~~g~~~~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~--~~~~~~v~i~~g~y~ 158 (792) T protein:vir:94 81 FTGQGVRVFDLNGKEYDVKGDLSYVKVENPRDDLRMVTVADYTFIVNRNMVVRPDTTPLYTLK--ENGDCLINIRGGMYG 158 (792) T ss_pred EcCCeEEEEecCCceEEecccCceeeecCCcceeEEEEEcCEEEEEeCCccceeEecCcCCCC--CCceEEEEccCCCcc Confidence 999999999999999999999999999999999999999999999999999999998776654 567899999999999 Q ss_pred eeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCcceeEE Q lcl|Aclame:pro 161 RRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGL 240 (801) Q Consensus 161 ~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ti 240 (801) ++|++++++.. +++++++++.+......+.++++.+|....... ....+|.+...++++++.++++....++ T Consensus 159 ~~y~i~i~~~~-~~~~~~~~t~~~~~~~~~~~~i~~~l~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 230 (792) T protein:vir:94 159 RTLAFTINNTK-IAYEIAHGDAPEHSKQTDAQWLVKKLAGLARLN-------VAFKGWTFTEGPGYIHVIAPSNSQINSL 230 (792) T ss_pred eeEEEEecCce-eeeeeecCcccceecccchhhhhhhhhhhcccc-------ccccccEEEECCeEEEEEecCCceeeee Confidence 99999999864 568889999998888889999998886533322 2224688899999999999998888999 Q ss_pred EEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEEEE Q lcl|Aclame:pro 241 QTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALV 320 (801) Q Consensus 241 t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv 320 (801) +++++..++++.++.+.++++++||+.|++|++|+|++..+++.|+||++|+..+++|+||+++++.+++++++|||.++ T Consensus 231 ~~~~g~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~i~~~~~~~~d~y~v~~~~~~~~w~E~~~~~~~~~~~~~tmp~~lv 310 (792) T protein:vir:94 231 STEDGYADQLMNAVMHTSQSFSRLPVEAPNGYTVKIVGDTSKTSDMFYVQYDNMKKVWKEVAGWGVQKGLNGGTMPHALV 310 (792) T ss_pred ecccCcCcceeeeeeecccccccccccCCCCcEEEEEccCCCCccceEEEEEcCCceEEEecccceeeeecccccCeeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEecCCEEEEEecCCccccccccccccCCCccEEE Q lcl|Aclame:pro 321 RASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDV 400 (801) Q Consensus 321 ~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~i~~ 400 (801) +.++++|+++..+|++|.+||+++||.|||+|++|++|+||||||+|++|++|||||+||||||+++|++++.|||||++ T Consensus 311 ~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~ 390 (792) T protein:vir:94 311 RQADGSFQMQVLPWTQRTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDV 390 (792) T ss_pred EcCCCcEEEEeccccccccCccccCccceeccCCcceEEEEcceEEEecCCeEEEEccCCcccCccccccCCCCCccEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEE Q lcl|Aclame:pro 401 AVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRY 480 (801) Q Consensus 401 ~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~ 480 (801) +++++++++|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.++|+.+|++++|+|++|+|++++|| T Consensus 391 ~~ss~~~~~i~~~v~~~~~L~l~T~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~~v~r~ 470 (792) T protein:vir:94 391 AVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTEFDVSDRARPFGVGRGVYFASPRASYTSLNRY 470 (792) T ss_pred EecCCcceeeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEeeccCCCCceEeCCeEEEeecCCCeeEEEee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceEEEE Q lcl|Aclame:pro 481 YAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFA 560 (801) Q Consensus 481 ~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~~~ 560 (801) +++++.+|+|++.|||+|++|||+|++.+++++++++.+++|+++++|+|++|+|||+++||+|+|||||+++|+++++| T Consensus 471 ~~~~~~~d~y~a~DlT~~~~hl~~~~v~~~~a~~~~~~~vv~~~~~~g~l~~~ty~~~~~e~~v~aW~~~~~~g~~~~~~ 550 (792) T protein:vir:94 471 YAVQDVSSVKSAEDMSAHVPNYIPNGVFSIRGSSTENFISVLSSNAPSRIFLYKFLYLNEEIAQQSWSHWELGSNVTVLA 550 (792) T ss_pred eeeccccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCeEEEEEEeecCCceEEEeEEEEEcCCcEEEEE Confidence 99999999999999999999999999999999988888888899999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCceEEE Q lcl|Aclame:pro 561 AQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSV 640 (801) Q Consensus 561 ~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~ 640 (801) +.+.+|+||++|+|+++++++||.+.+++.+.+...+++||||+.++...++++++.+..+.....+++|+.|++|+.+. T Consensus 551 ~~~~~D~l~~~v~r~~~~~~~r~~~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~T~~~~~~~~gl~~l~G~~v~ 630 (792) T protein:vir:94 551 CDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFPDEPYRLYIDNKVKYVIPEGSYNDDTYATTVKPVDVYGMKYWTGKFYI 630 (792) T ss_pred EeecCCEEEEEEEeCCCEEEEEEEEeecccccCCCcceeeeeeeeeEEecCcceecCceeeeeccccccCcccccCcEEE Confidence 99999999999999999999999999999999999999999999999999999999999998888899999999999999 Q ss_pred EecCCceeeccccccc-cccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEeec Q lcl|Aclame:pro 641 VFPDGKIVEIDQPING-WSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYED 719 (801) Q Consensus 641 v~~dG~~~~~~~~~~~-~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~ 719 (801) +.+||........... ...+++++||||+++++|+|||+|+++++++||+++.+.++++.+....+|+||||++++|.+ T Consensus 631 v~~dG~~~~~~~~~~~~~~~~~~i~~~g~~~a~~v~VGl~y~~~~~~~~~~~~~~~g~~~~~~~~~gr~rl~r~~~~~~~ 710 (792) T protein:vir:94 631 VASDGLVSWFEPPRGGWPNGVPMLTMSGNREGETIYVGLAISFRYVFSKFLIKKTADDGSIATEDIGRLQLRRAWVNYED 710 (792) T ss_pred EEecCceeEeecccceecCCccEEEecCCccCCeEEEeeeeeEEEEeccceeeccCCCcCccccceeeEEEEEEEEeeec Confidence 9999987654433332 346778999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEecccc Q lcl|Aclame:pro 720 SGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRSS 799 (801) Q Consensus 720 tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r~r 799 (801) ||.|.+++++.+++.++...+++++++.+..+.|++.++.++||+.+|+++.+|+|+|++|+||+|+||+|||+||+|+| T Consensus 711 tg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvlai~~eg~y~~r~~ 790 (792) T protein:vir:94 711 SGAFTVEVENTSRLFSYDMAGARLGSNVLRAGGLNVGTGQFRFPVTGNAQLNEVRIISEHTTPLNVIGCGWEGNYLRRSS 790 (792) T ss_pred cceeEEEEcCCCcceeeeeccceeccccccccccccccceEEEEeeccCceEEEEEEECCCCCEEEEEEEEEEEEecccc Confidence 99999999999999889999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CC Q lcl|Aclame:pro 800 GI 801 (801) Q Consensus 800 rv 801 (801) || T Consensus 791 ~v 792 (792) T protein:vir:94 791 GI 792 (792) T ss_pred CC Confidence 99 No 7 >protein:vir:94713 Length: 785 # NCBI annotation: tail tube # Family: family:all:825 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338122;genbank:gi:77118200;genbank:GeneID:3707736 Probab=100.00 E-value=5.5e-243 Score=1348.75 Aligned_cols=783 Identities=51% Similarity=0.904 Sum_probs=733.1 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+||++||||++||++++.+ ..++.++|+|+|+++|+|+|+ T Consensus 1 M~~~~~s~~n~~~GvSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~~v~~l~~~--~~~~~~~~~f~~~~~~~y~l~ 78 (785) T protein:vir:94 1 MPLITQSIKNLKGGISQQPDILRFSDQGEAQVNCWSSESDGLQKRPPTVFKRRLNID--VGSNPKFHLINRDEQEQYYIV 78 (785) T ss_pred CcceeeecchhhcceecCCchHHhhhHHhhhhcceeeeccCcccCChhHhhhcccCC--CCcCcEEEEEEeCCCceEEEE Confidence 999999999999999999999999999999999999999999999999999998754 346789999999999999999 Q ss_pred EeCCeEEEEeCCCcEEEEEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEeccCccc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~irv~~~~g~~~~v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) |++++||||+++|.++.|++..+|+.+.++.++|+|+|+||+|||+|++++|+++.+.++.. +.+.+++++++++++|+ T Consensus 79 ~~~~~irv~~~~G~~~~v~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~-~~~~~~~~~~i~~g~y~ 157 (785) T protein:vir:94 79 FNGSNIQIVDLSGNQYSVSGSVDYVKSSNPRDDIRVVTVADYTFVVNRKVVVKGGSEKSHSG-YNRKARALINLRGGQYG 157 (785) T ss_pred EcCCeEEEEecCCcEEEEecCCCceeecCchhheeeEeeCCEEEEEcCCcceeeeeccCCcC-CCCCCceEEEecccccc Confidence 99999999999999999999999999998999999999999999999999999988876543 45678999999999999 Q ss_pred eeEEEEeCCceEEEEEeecCCCccc-ceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCcceeE Q lcl|Aclame:pro 161 RRLSIEFNGAERAAVQLPDGSQPAH-VNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWG 239 (801) Q Consensus 161 ~~y~v~i~~~~ta~~ttp~~t~~~~-~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t 239 (801) ++|++.+++..++++++++++.... +...+.++++.++..++.+. .++|.+...++++++.++++...++ T Consensus 158 ~~y~i~i~g~~~at~~t~~~s~a~~s~~~~s~~~i~~~l~~~l~a~---------~t~~t~~~~g~~i~i~a~s~t~~~~ 228 (785) T protein:vir:94 158 RTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVTA---------YPTFTFDLGSGFLLITAPSGTDINS 228 (785) T ss_pred eeEEEeeCCcceeEEEEccCccccccccccchHHHHHHHHHHhhcc---------ccceeEEecCcEEEEEecCCccccc Confidence 9999999999999999999876554 46678888888888776543 2467788888999999999999999 Q ss_pred EEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEEE Q lcl|Aclame:pro 240 LQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWAL 319 (801) Q Consensus 240 it~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~l 319 (801) ++++++.+++++..+.++++++++||..|++|++|+|.+++++++|+||++|+..+++|+||+++|...+++.++|||.| T Consensus 229 ~s~~~~~~~t~~~~~~~~~~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~g~w~e~~~~g~~~~~~~~tmp~~l 308 (785) T protein:vir:94 229 VETEDGYANQLISPVLDTVQTISKLPLAAPNGYIIKIQGETNSSADEYYVMYDSNTKTWKETVEPGVVTGFDNTTMPHAL 308 (785) T ss_pred eeeecccCCeEEEEEEeeccceeccccccCCCCEEEEEccCCCCccceEEEEEcCCceEEEecccceeeeeeccccceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEecCCEEEEEecCCccccccccccccCCCccEE Q lcl|Aclame:pro 320 VRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPID 399 (801) Q Consensus 320 v~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~i~ 399 (801) ++.++++|+++..+|++|.+||+++||.|||+|+||++|+||||||+|++|++|||||+||||||+++|++++.|||||+ T Consensus 309 ~~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i~ 388 (785) T protein:vir:94 309 VRQSDGSFEFKALDWSKRGAGNDDTNPMPSFVDATINDVFFYRNRLGFLSGENVIMSRSASYFAFFPKSVATLSDDDPID 388 (785) T ss_pred EeccCCceEEeccccccccCCCcccCCcceecccccceEEEEeceEEEecCCeEEEEccCCcccCccccccCCCCCccEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEE Q lcl|Aclame:pro 400 VAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINR 479 (801) Q Consensus 400 ~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~ 479 (801) ++++++|++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.++|+.+|++++|+|++|+|++++| T Consensus 389 ~~~~~~~~~~i~~~v~~~~~L~l~T~~~e~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~r 468 (785) T protein:vir:94 389 VAVSHPRISILKYAVPFSEQLLLWSDEVQFVMTSSGVLTSKSIQLDVGSEFALGDNARPFAVGRSVFFSAPRGSFTSIKR 468 (785) T ss_pred EEecCCcceeeEEEeecCCcEEEEecCcEEEEcCCCcccceeEEEEEEEeeeccCCCCceEeCCeEEEEecCCCeeEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceEEE Q lcl|Aclame:pro 480 YYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVF 559 (801) Q Consensus 480 ~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~~ 559 (801) |+++++.+|+|++.|||+|++|||+|++++++++++++.+++|+++++|+|++|+|||+++||+|+|||||+|+|.++++ T Consensus 469 ~~~~~~~~d~y~~~dlt~~~~~~~~g~~~~~~a~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~r~~~~~~~~~~ 548 (785) T protein:vir:94 469 YFAVADVSDVKDADDTTGHVLSYIPNGVFDIQGTGTENYICVNSTGAYNRIYIYKFLFKDSVQLQASWSHWEFPKDDKIL 548 (785) T ss_pred eeeecccccceehhhHHHHHHHhcCCCcEEEEEecCCCcEEEEEEcCCCEEEEEEEeecCCceEEEEEEEEEeCCCeEEE Confidence 99999999999999999999999999999988888888888888999999999999999999999999999999988888 Q ss_pred EEEEcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeecccccc-CCcccCceE Q lcl|Aclame:pro 560 AAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIY-GMNFTKGRV 638 (801) Q Consensus 560 ~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~-gl~~l~g~~ 638 (801) |+...+|++|++++|.++.+++++...++..|.+.+.+++||||+..+..++++|++++..++..++..+ |+.|++|++ T Consensus 549 ~~~~~~d~~~~vv~r~~g~~~~~ie~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~~g~~~leg~~ 628 (785) T protein:vir:94 549 ASASIGSTMFIVRQHQGGVDIEHLKFIKEATDFPSEPYRLHVDSKVSMVIPIGSFNADTYKTTVDIGAAYGGNAPSPGRY 628 (785) T ss_pred EEEEeCCEEEEEEEcCCCEEEEEEEeecccCCCCCcceeEEeeeeeEEEecCcceeccccccccccccccccCCccCCeE Confidence 8888899999999999999999998888889999999999999999999999999999988887766655 899999999 Q ss_pred EEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEee Q lcl|Aclame:pro 639 SVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYE 718 (801) Q Consensus 639 v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~ 718 (801) +.+++||.+++...+ +....++++|||+++++|+|||+|+++++++||+++.+++ +......++|+||||++++|. T Consensus 629 v~v~adG~~~~~~~v---~~~~~tl~~~g~~~~~~v~vGl~y~~~~~~~~~~~~~~~~-~~~~~~~~gr~~l~r~~~~~~ 704 (785) T protein:vir:94 629 YLIDSQGAYLDLGEL---TSISTVITLNGDWSGRTVFIGRSYLMSYKFSRFLIKIEDD-SGTQSEDTGRLQLRRAWVNYR 704 (785) T ss_pred EEEeeCCcCccCceE---cCCCcEEEecCCCCCceEEEeeeeeEEEeecceeEEecCC-CcccccccccEEEEEEEEEee Confidence 999999998865433 3455789999999999999999999999999999987764 455677889999999999999 Q ss_pred cceeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 719 DSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) Q Consensus 719 ~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r~ 798 (801) +||+|.+++++..++..+.+.++++++ +..+.||+++|.++||+.+|+++.+|+|+|+.|+||+|+||+|||+||+|+ T Consensus 705 ~sg~~~v~v~~~~~~~~~~~~~~~~g~--~~~~~~~~~tg~~~vp~~g~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~ 782 (785) T protein:vir:94 705 DTGALRLIVRNGEREFVNTFNGYTLGQ--QTIGTTNIGDGQYRFAMNGNALTTSLTLESDYPTPVSIVGCGWEASYAKKA 782 (785) T ss_pred cccceEEEecCCCccceeeecCcccCc--ccccccccccceEEEEeecccceEEEEEEECCCCceEEEEEEEEEEEeccc Confidence 999999999998888888899999985 466789999999999999999999999999999999999999999999999 Q ss_pred cCC Q lcl|Aclame:pro 799 SGI 801 (801) Q Consensus 799 rrv 801 (801) ||| T Consensus 783 ~~v 785 (785) T protein:vir:94 783 RSV 785 (785) T ss_pred cCC Confidence 999 No 8 >protein:vir:8887 Length: 808 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813776;genbank:gi:29366731;genbank:GeneID:1258831 Probab=100.00 E-value=3.5e-237 Score=1316.91 Aligned_cols=789 Identities=55% Similarity=0.943 Sum_probs=725.9 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++|+++.....++++++|+|+++|+|+|+ T Consensus 1 M~~v~~s~~n~~~GvSqq~d~~R~~~q~~~~~N~~~~~~gG~~rRpgt~~v~~l~~~~~~~~~~~~~~~~~~~~~~y~v~ 80 (808) T protein:vir:88 1 MGLVSQSVKNLKGGISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQEQYFVG 80 (808) T ss_pred CcceeeecchhccceeccchhHhhhhhhhhhhcceeeeccccccCCchheeeeeeccCCCCCCcEEEEEEeCcCceEEEE Confidence 99999999999999999999999999999999999999999999999999999998877788999999999999999999 Q ss_pred EeCCeEEEEeCCCcEEEEEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEeccCccc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~irv~~~~g~~~~v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) |++++||||+++|.+++|++..+|+.+++++++|+++|+||+|||+|++++|++..+..+...++...++++++++++|+ T Consensus 81 ~~~~~i~v~~~~G~~~~v~~~~~y~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~~~~~vr~g~y~ 160 (808) T protein:vir:88 81 FSGTGLAVWDLKGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTHAAYPRLDGRAIINVRGGQYG 160 (808) T ss_pred EeCCeEEEEEcCCceEEEeecCcceEecCChhheeEEEEcCEEEEEcCCcceeecccccccCCCCCCccEEEEEcccccC Confidence 99999999999999999999999999999999999999999999999999999888877666677889999999999999 Q ss_pred eeEEEEeCCc-----eEEEEEeecCCCccc-----------ceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecC Q lcl|Aclame:pro 161 RRLSIEFNGA-----ERAAVQLPDGSQPAH-----------VNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGP 224 (801) Q Consensus 161 ~~y~v~i~~~-----~ta~~ttp~~t~~~~-----------~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~ 224 (801) ++|++++++. .++++.+++++.+.. .......+++..+...+. ......+|.+.... T Consensus 161 ~~y~i~i~g~~s~~~~t~t~~~~~~s~~~v~~~~~~~~~~~~~~~~~~~ia~~l~~~~~-------~~~~~~~~~~~~~~ 233 (808) T protein:vir:88 161 RTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAAELARQLT-------VSLGGSGWSFQAGT 233 (808) T ss_pred ceEEEEEecCCcceeeeEeEEEccCcccceeeccceeecccCCccccccchhhheeeee-------ecccccceEEEecc Confidence 9999999873 455666666654321 122334455544443322 22233468888888 Q ss_pred ceEEEEeCCCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEecc Q lcl|Aclame:pro 225 GFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGW 304 (801) Q Consensus 225 ~~~~i~~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~ 304 (801) +.+++..+.+.+.+++++++|.+++.+.+..+.|+++++||..+|+|++++|.+..++..++||++|+.++++|+||+++ T Consensus 234 ~~~~i~~~a~~~~~~~~t~~g~~~~~~~~~~~~v~~~~~lp~~~p~g~~v~i~~~~~~~~~~~yv~~~~~~~~w~e~~~~ 313 (808) T protein:vir:88 234 GWILINAPANDNVRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVEITGESARSGDNYWVQYDASGKVWKETAKP 313 (808) T ss_pred ceEEEEeccCceeEEEcccCCcCcceeeeeeeeccceeeccccCCCCcEEEEEecCCCCCceeEEEEEcCCeEEEEeeec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeeeEeeccccEEEEeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEecCCEEEEEecCCcccc Q lcl|Aclame:pro 305 NTRTHLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNF 384 (801) Q Consensus 305 ~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF 384 (801) +...+++.++|||.|++.++++|+|+.++|++|.+||+++||.|||+|++|++|+||||||+|++|++|||||+|||||| T Consensus 314 ~~~~~~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF 393 (808) T protein:vir:88 314 KIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGATINDVFFFRNRLGFLSGENVVMSRTSKYFNF 393 (808) T ss_pred cceeeecccceeEEEEecCCceEEEEecccccccccccccCccceecCCceeEEEEEcceEEEeeCCeEEEEeccCcccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCCe Q lcl|Aclame:pro 385 FPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRN 464 (801) Q Consensus 385 ~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~ 464 (801) ++++++++.|||||+++++++++++|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.|+|+.+|++ T Consensus 394 ~~~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~ 473 (808) T protein:vir:88 394 FPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSKTILSSKTIELDLTTEFDVSDGARPYGIGRG 473 (808) T ss_pred cCCcccCCCCCccEEEEecCCccceeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEecccCCCCceEeCCe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEE Q lcl|Aclame:pro 465 VYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQ 544 (801) Q Consensus 465 v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~ 544 (801) ++|++++|+|++++|++++++.+|+|++.|||+|++|||++++++++++++++.+++|+++++|+|++|+|||+++||+| T Consensus 474 v~f~~~~g~~~~v~r~~~~~~~~d~y~~~dlt~~~~h~~~~~~~~~~~~~~~~~~~v~~~~~~g~l~~~~y~~~~~e~~v 553 (808) T protein:vir:88 474 VYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFIYKFLYLDEILQQ 553 (808) T ss_pred EEEEecCCCeeEEEEEEEeeeccCceehhhHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEcCCCEEEEEEEeccCCceeE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEeeecCCceEEEE--EEEcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEeccccccccccccee Q lcl|Aclame:pro 545 QSWSHWDFGDNVTVFA--AQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTS 622 (801) Q Consensus 545 ~aW~~w~~~g~~~~~~--~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~ 622 (801) +|||||+|+|+++++| +...+|.||++|+|++++++|||.+..+.++.+.+++++||||+..+.. +.++..+..+. T Consensus 554 ~aW~r~~~~g~~~~~~~~~~~~~d~l~~vV~r~~~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~--g~~~~~~~~t~ 631 (808) T protein:vir:88 554 QSFSHWEFGDAATTRVLAASCIGSYCYLMIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKTIVL--GAYNIDTNLTS 631 (808) T ss_pred EeeEEEecCCCeeEEEEEEeccCCEEEEEEEcCCcEEEEEEeeccCCCCCccccceeeeeeeeeecc--ccccCccccce Confidence 9999999999887655 4556899999999999999999999999999999999999999987753 56777777776 Q ss_pred eccccc-cCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccc Q lcl|Aclame:pro 623 ISLSTI-YGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTA 701 (801) Q Consensus 623 ~~~~~~-~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~ 701 (801) ...... .++.|+++..+.+.+||.+... ...++..++++++|+++++++|+|||+|+++++++||+++.+++++..+ T Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~dg~~~~~--~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~p~~~~~~~g~~~~~ 709 (808) T protein:vir:88 632 FDVRTAYGGTPGPESTFYTIDQQGVLIEH--EARDWATNPYISFVGNRAGEQMVIGKQYTFQYEFSKFLIKQTADDGSTS 709 (808) T ss_pred eecccccccccccceeEEEEcCCceEEee--ecccccCcceEEeCCCccCceEEEeeeeeEEEEecceEEecCCCCccee Confidence 655543 5888999999999999987643 3455677889999999999999999999999999999999999998888 Q ss_pred eEEeeeEEEEEEEEEeecceeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEEeeecceeEEEEEECCCC Q lcl|Aclame:pro 702 TEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDAST 781 (801) Q Consensus 702 ~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~ 781 (801) ....+|+||+|+++++.+||.|.+.+++..++..+.+.+++++.+ +..+.+|+++|.++||+.+|+++.+|+|+|++|+ T Consensus 710 ~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~d~P~ 788 (808) T protein:vir:88 710 TEDIGRLQLRRAWLNYEESGAFEINVNNGSSEFVYVMTGGRLGIQ-RVLGELSVGTGQFKFPVTGNAVNQRVTITSSNPN 788 (808) T ss_pred ecccceEEEEEEEEEeecccceEEEeCCCcccceeeccCcccCcc-cccCccccccceEEEEecccCceeEEEEEECCCC Confidence 899999999999999999999999999888888888999999965 4688889999999999999999999999999999 Q ss_pred CEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 782 PLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 782 P~tvlai~weg~y~~r~rrv 801 (801) ||+|+||+|||+||+|+||| T Consensus 789 P~tilsi~~eg~y~~r~~~v 808 (808) T protein:vir:88 789 PLNVIGCGWEGNYIRRSSGI 808 (808) T ss_pred ceEEEEEEEEEEEeccccCC Confidence 99999999999999999999 No 9 >protein:vir:97014 Length: 800 # NCBI annotation: 33 # Family: family:all:825 # MgeID: mge:1644 # MgeName: K1-5 # Cross-refs: genbank:acc:YP_654134;genbank:gi:108862018;genbank:GeneID:5075963 Probab=100.00 E-value=1.9e-225 Score=1252.57 Aligned_cols=769 Identities=25% Similarity=0.385 Sum_probs=683.5 Q ss_pred ceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEe--C-CCceEE Q lcl|Aclame:pro 2 ALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINR--D-EFEQYF 78 (801) Q Consensus 2 a~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~--~-~~~~y~ 78 (801) -.|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++++.. ..++++|.+ + ++|.|+ T Consensus 1 ~~v~~s~~n~~~GvSqq~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva~l~~~~~---~~~~~~~~~~~d~~eq~~v 77 (800) T protein:vir:97 1 MEVQGSLGRQIQGISQQPPAVRLDGQCTAMVNMIPDVVNGTQSRMGTTHIAKILDAGT---DDMATHHYRRGDGDEEYFF 77 (800) T ss_pred CeeEeechhhhcccccCchhHhhhhhhhhhhcceeccccccccCCchhhheeecCCCc---ccceeEEEEEcCCceEEEE Confidence 3589999999999999999999999999999999999999999999999999987753 345655544 4 457778 Q ss_pred EEEeCCeEEEEeCCCcEEEEEccCcccc----ccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEe Q lcl|Aclame:pro 79 VVFTGEDIKVFDLDGKEYQVRGDRSYVR----TANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINV 154 (801) Q Consensus 79 l~~~~~~irv~~~~g~~~~v~~~~~y~~----~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 154 (801) ++++++++|||+++|.++.|++.++|.. +++++++|+++|+||+|||+|++++|++..+..+ ...+++++++ T Consensus 78 ~~~~~~~~rv~~~~G~~~~v~~~~~~~~y~~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~----~~~~~~~~~v 153 (800) T protein:vir:97 78 TLKKGQVPEIFDKYGRKCNVTSQDAPMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKASSRKSP----KVGNKAIVFC 153 (800) T ss_pred EEEcCCEEEEEecCCcEEEEecCCcceEEEeccCCCccceeEEEEcCEEEEeeCceeccccccccc----CCCcceEEEE Confidence 8999999999999999999999887653 4678899999999999999999999998776543 3568899999 Q ss_pred ccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCC Q lcl|Aclame:pro 155 RGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNN 234 (801) Q Consensus 155 ~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 234 (801) ++|+|+++|+|++++..++++++++++.+.++..++.++||++|..++.+.. ....|.+...+..+++.++++ T Consensus 154 ~~g~y~~~y~i~I~~~~~~~~~t~~~t~~~~~~~~~~~~ia~ql~~~~~~~~-------~~~~~t~~~~G~~~~i~~~~~ 226 (800) T protein:vir:97 154 AYGQYGTSYSIVINGANAASFKTPDGGSADHVEQIRTERITSELYSKLQQWS-------GVSDYEIQRDGTSIFIERRDG 226 (800) T ss_pred eecccceeeeeccCCcceEEEEEcCCCCcccceeccHHHHHHHHHHhhhccc-------cccceEEEeCCcEEEEEEcCC Confidence 9999999999999999999999999999999999999999999987765432 224678888888999988877 Q ss_pred cceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcC---CeEEEEEeccceeeeEe Q lcl|Aclame:pro 235 DNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLN---RKVWVETIGWNTRTHLH 311 (801) Q Consensus 235 ~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~---~~~W~e~~~~~~~~~~~ 311 (801) .+ +++++++++.++.+..+.++++++++||+.|++|+.++|+++.+++.+.||++|+.+ .++|+||++++...+++ T Consensus 227 ~~-~~v~t~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~~~ 305 (800) T protein:vir:97 227 AS-FTITTTDGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLLGFD 305 (800) T ss_pred ce-EEEEecCCcCceeeeEEeeeccchhhchhhCCCCcEEEEEccCCCCCceEEEEEEecccCcceEEEeecccccccee Confidence 54 689999999999999999999999999999999999999999999999999999854 56899999999999999 Q ss_pred eccccEEEEec----cCCeEEEeecccCcccCCCccccCCchhcC----CCceEEEEEcCceEEecCCEEEEEecCCccc Q lcl|Aclame:pro 312 YHTMPWALVRA----SDGNFDFKYLEWGARTVGDDTTNPYPSFTG----QTINDIFFFRNRLGFLSGENIILSRTSKYFN 383 (801) Q Consensus 312 ~~t~p~~lv~~----~~~t~~~~~~~w~~r~~gd~~~np~psf~g----~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~n 383 (801) +++|||.+++. ..++|++++.+|++|.+||+++||.|+|+| ++|++|+||||||+|++|++|||||+||||| T Consensus 306 ~~tmp~~~~~~~~~~~~g~~~~~~~~w~~r~~gd~~tnp~p~f~~~~~~~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~n 385 (800) T protein:vir:97 306 KGTMPYIIERTDIINGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTAGEAVIASRTSYFFD 385 (800) T ss_pred cccceEEEEEeecccccceeEEEeccccccccCccccCccccccCCcCCCCceeEEEEeeeEEEecCCeEEEEecCCccc Confidence 99999999987 578999999999999999999999999998 8999999999999999999999999999999 Q ss_pred cccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCC Q lcl|Aclame:pro 384 FFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGR 463 (801) Q Consensus 384 F~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~ 463 (801) |+++|++++.|||||+++++++|++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.++|+.+|+ T Consensus 386 F~~~t~~~~~DdD~I~~~~ss~~v~~i~~~v~~~~~L~i~T~~~q~~ls~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~ 465 (800) T protein:vir:97 386 FFRYTVISALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPGDKPLEKSNALLKPVTTFEVNNKVKPVVTGE 465 (800) T ss_pred cccccccCCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeeeccCCCCcEEeCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eEEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceE Q lcl|Aclame:pro 464 NVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIR 543 (801) Q Consensus 464 ~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~ 543 (801) +++|+|++|+|++|+||.+ ++.+|+|++.|||+|++|||+|++.+++++++|++++||+++++++|++|+||++++||+ T Consensus 466 ~v~fv~~~g~~s~vre~~~-~~~~d~~~a~DlT~~~~hl~~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~~ 544 (800) T protein:vir:97 466 SVMFATNDGSYSGVREFYT-DSYSDTKKAQAITSHVNKLIEGNITNMAASTNVNRLLVTTDKYRNIIYCYDWLWQGTDRV 544 (800) T ss_pred eEEEeeCCCCeeEEEEEee-eecccceehhhHHHHHHHhcCCceEEEEEeCCCCeEEEEEEcCCCEEEEEEEeecCCceE Confidence 9999999999999999976 566799999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEeeecCCceEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecc-----------cc Q lcl|Aclame:pro 544 QQSWSHWDFGDNVTVFAAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIP-----------AG 612 (801) Q Consensus 544 ~~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~-----------~~ 612 (801) |+|||||++++...++|+...+|.||++|+|+++.+||||.+.... + ....++++||+....... .. T Consensus 545 ~~aW~~~~~~~~~~~~~~~~~~d~l~~vv~r~~~~~ler~~~~~~~-~-~~~~~~~~lD~~~~~~~~~~~~~~~~v~~~~ 622 (800) T protein:vir:97 545 QSAWHVWKWPIGTKVRGMFYSGELLYLLLERGDGVYLEKMDMGDAL-T-YGLNDRIRMDRQAELVFKHFKAEDEWVSEPL 622 (800) T ss_pred EEeEEEEecCCCeEEEEEEEcCCeEEEEEEcCCcEEEEEEecccCc-C-cccccceeccccceeeeeeeecccceEeccc Confidence 9999999999988899988899999999999999999999765432 2 345567889965432211 11 Q ss_pred cccccccceeeccccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEe Q lcl|Aclame:pro 613 TYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIK 692 (801) Q Consensus 613 ~~~~~~~~t~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~ 692 (801) .+ ............++|+.|++|..+.... +.. ..+..+....+++++++++|+|||+|+++++++||+++ T Consensus 623 ~~-~~~~~~~~~~~~v~g~~~~~G~~v~~~~-~~~-------~~~~~~~~~~~~~~~~~~~v~vGl~Y~~~~~~~p~~i~ 693 (800) T protein:vir:97 623 PW-VPTNPELLDCILIEGWDSYIGGSFLFKY-NPS-------DNTLSTTFDMYDDSHVKAKVIVGQIYPQEFEPTPVVIR 693 (800) T ss_pred cc-cCCCcceeEEEEecccccccCceEEEEe-cCc-------cCcccccceEEeCCCCCcEEEEeeeeeEEEEecceEEE Confidence 11 1112222223456799999999986553 322 22334445677888999999999999999999999998 Q ss_pred ccCCCCccceEEeeeEEEEEEEEEeecceeEEEEeCCCCcce--eeeeccceeccccccCCccccccceEEEEEeeecce Q lcl|Aclame:pro 693 KTAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREF--IYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQT 770 (801) Q Consensus 693 ~~~~~~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~ 770 (801) .++ ++....+|+||+|++|+|.+||+|++.+++..++. .+...++++++..+..+.|++++|+++||+.+|+++ T Consensus 694 ~~~----g~~~~~~r~~i~r~~~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~~g~~~~ 769 (800) T protein:vir:97 694 DNQ----DRVSYIDVPVVGLVHLNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPLRAKSTD 769 (800) T ss_pred ecC----CCceeecceEEEEEEEeecccccEEEEEccccCCceeeeecCccccccccccCCccccccceEEEEeecccce Confidence 554 35667899999999999999999999999988863 456788999999999999999999999999999999 Q ss_pred eEEEEEECCCCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 771 NTVTIESDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 771 ~~v~I~~~~P~P~tvlai~weg~y~~r~rrv 801 (801) .+|+|+|++|+||+|++|+|||+||+|+||| T Consensus 770 ~~v~i~~d~PlP~tvlsi~~eg~y~~r~~rv 800 (800) T protein:vir:97 770 VVYRIIVESPHTFQLRDIEWEGSYNPTKRRV 800 (800) T ss_pred eEEEEEECCCCcEEEEEEEEEEEeecccccC Confidence 9999999999999999999999999999999 No 10 >protein:vir:105647 Length: 800 # NCBI annotation: putative tail tubular B protein # Family: family:all:825 # MgeID: mge:1674 # MgeName: K1E # Cross-refs: genbank:acc:YP_425011;genbank:gi:83571759;uniprot:Q2WC41;genbank:GeneID:3837288 Probab=100.00 E-value=2.7e-224 Score=1246.24 Aligned_cols=779 Identities=25% Similarity=0.378 Sum_probs=684.5 Q ss_pred ceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEe--CCCceEEE Q lcl|Aclame:pro 2 ALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINR--DEFEQYFV 79 (801) Q Consensus 2 a~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~--~~~~~y~l 79 (801) -.|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++|+++..+. .+.+.+.+ ++++.|++ T Consensus 1 ~~v~~s~~nl~~GvSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva~l~~~~~~~--~~~~~~~~~~~~~~~~~~ 78 (800) T protein:vir:10 1 MEVQGSLGRQIQGISQQPPAVRLDGQCTTMVNMVPDVVNGTQSRMGTTHIAKLLDEGTDN--MATHHYRRGEGDEEYFFT 78 (800) T ss_pred CeEEeecchhcccccccchhHhhhhhhhhhhcceeeeccCcccCCcceEEEeecCCCCCc--cEEEEEecCCccceEEEE Confidence 358999999999999999999999999999999999999999999999999998775433 33333333 45677778 Q ss_pred EEeCCeEEEEeCCCcEEEEEccCccc----cccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEec Q lcl|Aclame:pro 80 VFTGEDIKVFDLDGKEYQVRGDRSYV----RTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVR 155 (801) Q Consensus 80 ~~~~~~irv~~~~g~~~~v~~~~~y~----~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 155 (801) ++.++++|||+++|.+++|....++. .+.+++++|+++|+||+|||+|++++|+++.+.++.. ..+++++++ T Consensus 79 ~~~g~~~rv~~~~G~~~~v~~~~~~~~~~~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~~----~~~~~~~vr 154 (800) T protein:vir:10 79 LKKGQVPEIFDKHGRKCNVISQDAPMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKVSNRKSPKV----GDKAIVFCA 154 (800) T ss_pred EEcCCeEEEEecCCcEEEeecCCcceeeeeccCCchhhEEEEEEcCEEEEecCcccccccccCCCCC----CceEEEEEe Confidence 88889999999999999998766543 3567788999999999999999999999988866544 367999999 Q ss_pred cCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCc Q lcl|Aclame:pro 156 GGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNND 235 (801) Q Consensus 156 ~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 235 (801) +++|+++|+|++++..++.+++++++.+.++.+++.++|+++|..++.+.. ..+++.+...++.+++.+.++. T Consensus 155 ~g~y~~~y~i~i~g~~~~~~~t~~~~~~~~~~~~s~~~i~~~L~~~l~~~~-------~~~~~t~~~~g~~i~i~~~~~~ 227 (800) T protein:vir:10 155 YGQYGTSYSIIINGTTAASFKTPDGGSAEHVEQIRTERITSELYSKLQQWS-------GVNDYEIQRDGTSIFIERRDGK 227 (800) T ss_pred ccccccceeEEeccceEEEEEecCCCcccccccccHHHHHHHHHhhhhhcC-------cccceEEEEcCcEEEEEEecCC Confidence 999999999999999999999999999999999999999999987775432 2245788888999999888775 Q ss_pred ceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEc---CCeEEEEEeccceeeeEee Q lcl|Aclame:pro 236 NVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDL---NRKVWVETIGWNTRTHLHY 312 (801) Q Consensus 236 ~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~---~~~~W~e~~~~~~~~~~~~ 312 (801) + +++++.+++.++.+..+.+.++++++||..|++|+.++|.++.+++.+.||++|+. +.++|+||++++...+++. T Consensus 228 ~-~~~~~~~~~~~~~~~~~~~~v~~~~~Lp~~~~~g~~~~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~~~~ 306 (800) T protein:vir:10 228 S-FTVTTTDGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLLGFDK 306 (800) T ss_pred c-eEEEEeecCCcceEEEEEeeccceeeccccCCCCceEEEEcCCCCCCceeEEEEEeccccceEEEeecccCceeeeec Confidence 4 68999999999999999999999999999999999999999999999999999986 4468999999999999999 Q ss_pred ccccEEEEecc----CCeEEEeecccCcccCCCccccCCchhcC----CCceEEEEEcCceEEecCCEEEEEecCCcccc Q lcl|Aclame:pro 313 HTMPWALVRAS----DGNFDFKYLEWGARTVGDDTTNPYPSFTG----QTINDIFFFRNRLGFLSGENIILSRTSKYFNF 384 (801) Q Consensus 313 ~t~p~~lv~~~----~~t~~~~~~~w~~r~~gd~~~np~psf~g----~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF 384 (801) ++|||.|++.+ .++|++.+.+|++|.+||+++||.|||+| ++|++|+||||||+|++|++|||||+|||||| T Consensus 307 ~tmp~~lv~~~~~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~~~~~~~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF 386 (800) T protein:vir:10 307 GTMPYIIERTGIIDGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTAGEAVIASRTSYFFDF 386 (800) T ss_pred ccccEEEEEeeeeecceeEEEEeccccccccCCCCCCCCchhcCCCCCCCceeEEEEeeeEEEeeCCeEEEEccCCcccc Confidence 99999999876 78999999999999999999999999998 57999999999999999999999999999999 Q ss_pred ccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCCe Q lcl|Aclame:pro 385 FPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRN 464 (801) Q Consensus 385 ~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~ 464 (801) +++|++++.|||||+++++++|++.|+|+++++++|+|||+++||+|+|+++|||+|++++++|+|+|++.|+|+.+|++ T Consensus 387 ~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~q~~l~g~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~ 466 (800) T protein:vir:10 387 FRYTVISALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPGDKPLEKSNALLKPVTTFEVNNKVKPVVTGES 466 (800) T ss_pred ccccccCCCCCccEEEEEcCCcceeeeeEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeeeccCCCCceEeCCe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEE Q lcl|Aclame:pro 465 VYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQ 544 (801) Q Consensus 465 v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~ 544 (801) ++|+|++|+|++|+||.+ ++.+|+|++.|||+|++|||+|++.+|+++++|++++||+++++++|++|+|||+++||+| T Consensus 467 v~Fv~~~g~~s~vre~~~-~~~~d~~~a~DlT~~~~hl~~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~yl~~~~e~~~ 545 (800) T protein:vir:10 467 VMFATNDGSYSGVREFYT-DSYSDTKKAQAITSHVNKLIEGNITNMAASTNVNRLLVTTDKYRNIIYCYDWLWQGTDRVQ 545 (800) T ss_pred EEEecCCCCeeEEEEEee-eecccceehhhHHhHHHHhcCCceEEEEEeCCCCeEEEEEEcCCCeEEEEEEeecCCceEE Confidence 999999999999999976 5667999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEeeecCCceEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeec Q lcl|Aclame:pro 545 QSWSHWDFGDNVTVFAAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSIS 624 (801) Q Consensus 545 ~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~ 624 (801) +|||||++++...++|+...+|+||++|+|+++.++|||....+. + ....+++||||+..+.....+++......... T Consensus 546 ~aW~~w~~~~~~~~~~~~~~~d~l~~iv~r~~~~~ier~~~~~~~-~-~~~~~~~~lD~~~~~~~~~~~~~~~~~~~~~~ 623 (800) T protein:vir:10 546 SAWHVWEWPMGTKVRGMFYSGELLYLLLERGDGVYLEKMDMGDAL-T-YGLNDRIRMDRQAELIFKHFKAEDEWISEPLP 623 (800) T ss_pred EEEEEEEcCCCcEEEEEEEeCCeEEEEEECCCcEEEEEEecccCc-c-ccccceeeeecceeecccccccCcceEEEecc Confidence 999999998777788888889999999999999999999765432 2 35677899999887766554443333222111 Q ss_pred --cccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccce Q lcl|Aclame:pro 625 --LSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTAT 702 (801) Q Consensus 625 --~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~ 702 (801) .....++.++.......+++|.+........++...+-...+|++++++|+|||+|+++++++||+++.++ ++. T Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~g~~~~~~~~~~g~~~~~~v~VGl~Y~s~~~~~~~~i~~~~----g~~ 699 (800) T protein:vir:10 624 WTPTNPELLDCILIEGWDSYIGGSFLFKYKPSDNTLSTTFDMHDDNHVKAKVIVGQIYPQEFEPTPVVIRDRQ----DRV 699 (800) T ss_pred ccccCCcceEEeeeccceeecCceeEEEEEecCCceEeeeeecCCCcccceEEEeeeeeEEEeecceEEEcCC----Ccc Confidence 11223455555555566677777665444444433332233778899999999999999999999998544 356 Q ss_pred EEeeeEEEEEEEEEeecceeEEEEeCCCCcc--eeeeeccceeccccccCCccccccceEEEEEeeecceeEEEEEECCC Q lcl|Aclame:pro 703 EDIGRLQLRRAWVNYEDSGAFIIRVNNLSRE--FIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDAS 780 (801) Q Consensus 703 ~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P 780 (801) +..+|+||+|++|+|.+||.|.+++++..++ ..+...+++.+++.+..|.+|+++|+++||+.+|+++.+|+|++++| T Consensus 700 ~~~~r~~i~r~~~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~d~P 779 (800) T protein:vir:10 700 SYIDVPVVGLVHLNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPLRAKSTDAVYRIIVESP 779 (800) T ss_pred cccCCeEEEEEEEEeecCceEEEEeccCcccceeEEccCCeeccccccccCcccccCceEEEEEeccCceeEEEEEECCC Confidence 6779999999999999999999999998775 44667788899999999999999999999999999999999999999 Q ss_pred CCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 781 TPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 781 ~P~tvlai~weg~y~~r~rrv 801 (801) +||+|++|+|||+||+|+||| T Consensus 780 ~P~tvlai~~eg~y~~r~~rv 800 (800) T protein:vir:10 780 HTFQLRDIEWEGSYNPTKRRV 800 (800) T ss_pred CcEEEEEEEEEEEeecccccC Confidence 999999999999999999999 No 11 >protein:vir:7021 Length: 803 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:141 # MgeName: SP6 # Cross-refs: genbank:acc:NP_853594;genbank:gi:31711676;genbank:GeneID:1481802 Probab=100.00 E-value=1.7e-223 Score=1241.85 Aligned_cols=778 Identities=24% Similarity=0.373 Sum_probs=682.3 Q ss_pred ceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeC---CCceEE Q lcl|Aclame:pro 2 ALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRD---EFEQYF 78 (801) Q Consensus 2 a~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~---~~~~y~ 78 (801) -+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++|+++... ..+++.++++ ++|+|+ T Consensus 1 ~~v~~s~~nl~~GvSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~~va~l~~~~~~--~~~~~~~~~~~~~~e~~~~ 78 (803) T protein:vir:70 1 MEVQGSLGRQIQGISQQPPAVRLDGQCSEMVNMVPDVVEGTKSRMGTTHIAKLLEYGED--DMAVHHYRRGGEGEEEYFF 78 (803) T ss_pred CeEEeecchhccccccCchHHhhhhhhhhhhcceeeeccccccCChhhhhhhhcCCCcc--cceeeEEEecCCCceEEEE Confidence 47999999999999999999999999999999999999999999999999998765432 2334444433 568999 Q ss_pred EEEeCCeEEEEeCCCcEEEEEccCcccc----ccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEe Q lcl|Aclame:pro 79 VVFTGEDIKVFDLDGKEYQVRGDRSYVR----TANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINV 154 (801) Q Consensus 79 l~~~~~~irv~~~~g~~~~v~~~~~y~~----~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 154 (801) ++|++++||||+++|.+++|++..+|.. +++++++|+++|+||+|||+|++++|++..+..+ .+.+++++++ T Consensus 79 ~~~~~~~irv~~~~G~~~~v~~~~~~~~~l~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~----~~~~~~~~~v 154 (803) T protein:vir:70 79 IMKKGQVPEIFDKQGRKCMVQSQDAPMTYLSEVTNPREDVQFMTIADVTFMLNRKKIVKARPERSP----QVGSTAIVFM 154 (803) T ss_pred EEecCCeEEEEEcCCcEEEEecCCceeEEEeecCCChhheeEEEEcCEEEEecCceeeeeccccCC----CCCCceEEEE Confidence 9999999999999999999999888743 4577889999999999999999999998765433 3567899999 Q ss_pred ccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCC Q lcl|Aclame:pro 155 RGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNN 234 (801) Q Consensus 155 ~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 234 (801) ++++|+++|+|++++..++.+++++++........+.++|+.++..++.+. ....+|.+...++.+++.++++ T Consensus 155 r~g~y~~~y~itIng~~~a~~~t~~~~~~~~~~~~~~~~ia~~l~~~~~~~-------~s~a~~~~~~~g~~~~i~~~~~ 227 (803) T protein:vir:70 155 AYGQYGTHYKIIIDGVVAAGYKTRDGAEAHHIEDIRTESIAYNLYQSLQSW-------DKIADYEIQLDGTSIYITRRDG 227 (803) T ss_pred eecCCcceEEEEeCCcceEEEEeCCCcccccccccchhhhhhhhhhheecc-------ccccceEEEECCcEEEEEEcCC Confidence 999999999999999999999999999988889999999999887654322 1223688889999999999999 Q ss_pred cceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCC---eEEEEEeccceeeeEe Q lcl|Aclame:pro 235 DNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNR---KVWVETIGWNTRTHLH 311 (801) Q Consensus 235 ~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~---~~W~e~~~~~~~~~~~ 311 (801) .+.++++++++.+++.+...++.++++++||+.|++|+.++|.++.+++.|.|||+|+..+ ++|+||++++...+++ T Consensus 228 ~~~~~~~t~~g~~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~g~~~~d~y~v~~~~~~~~~~~w~e~a~~g~~~~~~ 307 (803) T protein:vir:70 228 STTFDITTEDGAKGKDLVAIKYKVASTDLLPSRAPEGYKVQVWPTGSKPESRYWLQAEKQNGNIVSWKETLAADVLIGFD 307 (803) T ss_pred CCeeEEEeecCcCCcEEEEEEecccceeeccccCCCCceEEEEcCCCCCCceeeEEEEeccCCccceEeeeccceeeeee Confidence 9999999999999999999999999999999999999999999999999999999998643 5899999999999999 Q ss_pred eccccEEEEecc----CCeEEEeecccCcccCCCccccCCchhcC----CCceEEEEEcCceEEecCCEEEEEecCCccc Q lcl|Aclame:pro 312 YHTMPWALVRAS----DGNFDFKYLEWGARTVGDDTTNPYPSFTG----QTINDIFFFRNRLGFLSGENIILSRTSKYFN 383 (801) Q Consensus 312 ~~t~p~~lv~~~----~~t~~~~~~~w~~r~~gd~~~np~psf~g----~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~n 383 (801) .+||||.+++.+ .++|+++.++|+.|.+|||++||.|+|++ +||++|+||||||+|++|++|||||+||||| T Consensus 308 ~~t~p~~~v~~~~~~~~~~~~~~~~~~~~r~~gdd~tnp~psf~~~~~~~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~n 387 (803) T protein:vir:70 308 KSTMPYIIERTGFVNGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTLGGMFMVQNRLCVTAGEAVIATRTSYFFD 387 (803) T ss_pred cccccEEEEEEEEeecceeEEEEeeccccccccccccCccccccCccCCCCceeEEEEeceEEEeeCCeEEEEccCCccc Confidence 999999999865 46799999999999999999999999997 6899999999999999999999999999999 Q ss_pred cccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCC Q lcl|Aclame:pro 384 FFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGR 463 (801) Q Consensus 384 F~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~ 463 (801) |+++|++++.|||||++++++++++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.++|+.+|+ T Consensus 388 F~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~i~T~~~q~~l~g~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~ 467 (803) T protein:vir:70 388 FFRYTAVSAVATDPFDVFSDASEVYQLKHAVTLDGSTVLFADKSQFILPGDKPLEKSNVLLKPVTTFEVNNNVKPVATGE 467 (803) T ss_pred cccccccCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEeeccCCCccEEeCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eEEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceE Q lcl|Aclame:pro 464 NVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIR 543 (801) Q Consensus 464 ~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~ 543 (801) +++|+|++|+|++|+||.+ ++.+|+|++.|||+|++|||++++.+++++++|++++||+++++++||+|+||+.++||+ T Consensus 468 ~v~fv~~~g~~s~vre~~~-~~~~d~y~a~Dlt~~a~hl~~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~yl~~~~e~~ 546 (803) T protein:vir:70 468 SVMFATSEGAYSGIREFYT-DSYSDTKKAQAITSHVNKLLEGNVIMMSASTNVNRLLVLTDKYRNIIYCYDWLWQGTERV 546 (803) T ss_pred eEEEeccCCCeeEEEEEec-cccccceehhhhhhhhHhhcCCceEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCcEE Confidence 9999999999999999976 556799999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEeeecCCceEEEEEEEcCCEEEEEEEeCCCE-EEEEEEEeeccCCCCcccceeeeeeeEEEeccccccccccccee Q lcl|Aclame:pro 544 QQSWSHWDFGDNVTVFAAQVINSTMTVLMSNEHAV-WMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTS 622 (801) Q Consensus 544 ~~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~-~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~ 622 (801) |+|||||+|+|+++++|+...+|+||++|+|++++ ++|||....... ..+.+++||||+..+..... ......+. T Consensus 547 v~aW~r~~~~g~~~~~~~~~~~d~l~~vv~r~~~g~~ier~~~~~~~~--~~~~~~~~lD~~~~~~~~~~--~~~~~~~~ 622 (803) T protein:vir:70 547 QAAWHKWEWPLGTFIRGMFYSGEHLYLLIERGSTGVYLERMDMGDALV--YNLNDRIRMDRQAELIFRHI--KAEDVWVS 622 (803) T ss_pred EEeEEEEEcCCCEEEEEEEecCCEEEEEEEECCCeEEEEEEecccccc--cCCcceeEeccceeEeeccc--cCCceeee Confidence 99999999999999999999999999999998764 588887654432 35677899999887754321 11111221 Q ss_pred ec----cccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCC Q lcl|Aclame:pro 623 IS----LSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDG 698 (801) Q Consensus 623 ~~----~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~ 698 (801) .. .....++.+.++.......+|.+.........+....-..+++++++++|+|||+|+++++++||+++.++ T Consensus 623 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~~~~~~~~a~~v~VGl~Y~~~~~~~~~~i~~~~--- 699 (803) T protein:vir:70 623 EPLPWQPTDVTLLDCVLIDGWDSYIGGSFLFSYNPGDNTLTTTFDMHDDDHVKAKVVVGQLYPQEFEPTQVVIRDNQ--- 699 (803) T ss_pred ecccccCcccceeeEEEeeeeeeecCCeEEEEEcCCCccceeeeeEECCCCcccEEEEeeeeeEEEeecceEEEcCC--- Confidence 11 12344556665555555666655543332222222222457889999999999999999999999998443 Q ss_pred ccceEEeeeEEEEEEEEEeecceeEEEEeCCCCcce--eeeeccceeccccccCCccccccceEEEEEeeecceeEEEEE Q lcl|Aclame:pro 699 STATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREF--IYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIE 776 (801) Q Consensus 699 ~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I~ 776 (801) ++....+|+||+|++|+|.+||.|.+++++..++. .+...++++++..+..|.+|+++|+++||+.+|+++.+|+|+ T Consensus 700 -~~~~~~~~~rl~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~s~~~~g~~~~~~g~~~~~tg~~~vP~~~~~~~~~v~i~ 778 (803) T protein:vir:70 700 -ERVSYIDVPTVGLVHLNLDKYPDFKVEVKNLKSGKVRNVLASNRVGGAINNIVGYVEPREGVFKFPLRSLSTDTVYRVM 778 (803) T ss_pred -CccccccccEEEEEEEEeecccceEEEEecCCccccceeeccchhccccccccCccccccceEEEEeeccCcceEEEEE Confidence 46778888999999999999999999999887753 467889999999999999999999999999999999999999 Q ss_pred ECCCCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 777 SDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 777 ~~~P~P~tvlai~weg~y~~r~rrv 801 (801) +++|+||+|++|+|||+||+|+||| T Consensus 779 ~d~P~P~tvlsi~weg~y~~r~rrv 803 (803) T protein:vir:70 779 VESPHTFQLRDIEWEGSYNPTKRRV 803 (803) T ss_pred ECCCCCeEEEEEEEEEEEecccccC Confidence 9999999999999999999999999 No 12 >protein:vir:103341 Length: 806 # NCBI annotation: tail tubular protein B-like protein # Family: family:all:825 # MgeID: mge:1609 # MgeName: Era103 # Cross-refs: genbank:acc:YP_001039670;genbank:gi:125999999;genbank:GeneID:4818417 Probab=100.00 E-value=2.4e-219 Score=1219.15 Aligned_cols=776 Identities=24% Similarity=0.371 Sum_probs=677.2 Q ss_pred ceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEe-CCCceEEEE Q lcl|Aclame:pro 2 ALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINR-DEFEQYFVV 80 (801) Q Consensus 2 a~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~-~~~~~y~l~ 80 (801) -+|+|+||||++|||||+|++|||+||++|+||+|+|+|||+||||++||++|++.. ..+.++|.|++ ++.|+|+++ T Consensus 1 ~~v~~s~~nl~~GvSqQ~d~~R~~~q~~~~~N~~~~~~~Gl~rRPgt~~va~l~~~~--~~~~~~~~~~~~~~~~~y~v~ 78 (806) T protein:vir:10 1 MEVQGSYGRQLQGVSQQPIAVRLPGQVTSQLNAVPNVVDGLKTRMGSKHLARILNSL--DANSLIHHYKRGDDAEEYFVI 78 (806) T ss_pred CeeEeecchhccceeccChhHhhhhhhhhhhcceeccccccccCCchhhhhhhcCCC--CccceEEEEEecCCceEEEEE Confidence 489999999999999999999999999999999999999999999999999987643 45688999999 556899999 Q ss_pred EeCCeEEEEeC-CCcEEEEEccCc---cccc-cCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEec Q lcl|Aclame:pro 81 FTGEDIKVFDL-DGKEYQVRGDRS---YVRT-ANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVR 155 (801) Q Consensus 81 ~~~~~irv~~~-~g~~~~v~~~~~---y~~~-~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 155 (801) |.++.+|||+. +|.++.+..++. |+.+ .+++++|+++|+||+|||+|++++|+++.+..+. ...+++++++ T Consensus 79 ~~~g~i~v~~~~~G~~~~v~~~~~~~~yl~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~----~~~~~~v~v~ 154 (806) T protein:vir:10 79 LQPGQVPVIFTVGGLACPVNTQGSAATYLSSSSLPRETTQLMTIGDYTFVLNRKMPVQARGDVTPS----LDNKGLVYVA 154 (806) T ss_pred EcCCcEEEEEcCCCcEEEecCCCceEEEeccCCCCcceeeEEEEcCEEEEecCcEeeeecccccCC----CCcceEEEEe Confidence 99999999984 898888776544 3332 3467899999999999999999999998876543 3467999999 Q ss_pred cCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCc Q lcl|Aclame:pro 156 GGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNND 235 (801) Q Consensus 156 ~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 235 (801) +|+|+++|++++++..++++++++++........+.++++.++..++.+..... ..|.....+..+++.++++ T Consensus 155 ~g~y~~~y~i~Ing~~~a~~~t~~~~~~~~~~~~~~~~~a~~l~~~l~~~~~~~------~~~~~~~~g~~~~i~~~~~- 227 (806) T protein:vir:10 155 YANFSFTYQILINGQVAAEHKTASSEDVKNEDLVRTDYVAGKLLENFNSRTASF------PGFSMYQDGNVLVVDNSNG- 227 (806) T ss_pred ecccCceeeEEeccceEEEEEeccCCCcccccccchhHHHHHHHhhhccccccc------ceeEEEEcccEEEEecCCC- Confidence 999999999999999999999999998888889999999999988776543222 2466666667777776655 Q ss_pred ceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEc---CCeEEEEEeccceeeeEee Q lcl|Aclame:pro 236 NVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDL---NRKVWVETIGWNTRTHLHY 312 (801) Q Consensus 236 ~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~---~~~~W~e~~~~~~~~~~~~ 312 (801) ..+.+++.++..++.+.+++++++++++||.+|++|+.++|+++.+...+.||++|+. +.++|+||++++...+++. T Consensus 228 ~~~~~~~~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~~~~w~e~~~~~~~~~~~~ 307 (806) T protein:vir:10 228 ANYALTTVDGADGQDLVAIRHKVTNLDTLPNRAPVGYKVQVWPTGSKPESRYWLQAESQDGSKVTWVETIAPGVRKGWNA 307 (806) T ss_pred CccEEEEeeCCCCceeEEeecccCccccCccccCCCcEEEEeccCCCCCCceEEEEEeeccCceEEEeecccccccceec Confidence 4577889999999999999999999999999999999999999999999999999964 4668999999999999999 Q ss_pred ccccEEEEecc-----CCeEEEeecccCcccCCCccccCCchhcC----CCceEEEEEcCceEEecCCEEEEEecCCccc Q lcl|Aclame:pro 313 HTMPWALVRAS-----DGNFDFKYLEWGARTVGDDTTNPYPSFTG----QTINDIFFFRNRLGFLSGENIILSRTSKYFN 383 (801) Q Consensus 313 ~t~p~~lv~~~-----~~t~~~~~~~w~~r~~gd~~~np~psf~g----~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~n 383 (801) ++|||.+++.+ +++|+++.++|++|.+||+++||.|||++ ++|++|+||||||+|++|++|||||+||||| T Consensus 308 ~t~p~~~v~~~~~~~~~~~~~~~~~~w~~r~~Gd~~tn~~psF~~~~~~~~it~v~f~q~RL~f~s~~~v~~Srsgd~~n 387 (806) T protein:vir:10 308 ATMPHVLVRESLNANGSANFTYRPGEWEDRDVGDDLTNDFPSLLNDSSPQPISSMLMVQNRLMLTSGEAVVASRTSRFFD 387 (806) T ss_pred cccceEEEeeeeeecccceeEEEecccccccccccccCccCcccCCCCCccceEEEEEeeeEEEecCCeEEEEccCCccc Confidence 99999999865 78999999999999999999999999997 6789999999999999999999999999999 Q ss_pred cccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCC Q lcl|Aclame:pro 384 FFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGR 463 (801) Q Consensus 384 F~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~ 463 (801) |+++|++++.|||||+++++++|+|.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.|+|+.+|+ T Consensus 388 F~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~ 467 (806) T protein:vir:10 388 FFRYTVLATVDTDPFDVFADIEEVYNIRWSAQMDGDVVLFTSDQQFTLPGDKPLTPTSAVIRPVTQFKMTPGVKPAPSGD 467 (806) T ss_pred CccccccCCCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeecccCCCCceEeCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eEEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceE Q lcl|Aclame:pro 464 NVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIR 543 (801) Q Consensus 464 ~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~ 543 (801) +++|+|++|++++|+||.+ ++.+|+|.+.|||+|++|||+|++++++++++++.+++|+++++|+|++|||+++++||+ T Consensus 468 ~v~Fv~~~g~~s~vre~~y-~~~~d~~~~~DlT~~~~hl~~g~~~~~~~~~~~~~~~~~~~~~dg~l~~~ty~~~~~e~~ 546 (806) T protein:vir:10 468 SILFAFDQGSYSGIREFFT-DSYSDTKKAQPATSHVDKYIRGKVLELSASSSFNRAFIITSPDRNILYVYDWLYEGTEKV 546 (806) T ss_pred eEEEeeCCCCeeEEEEEEe-eeeccceehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceE Confidence 9999999999999999975 556799999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEeeecCCceEEEEEEEcCCEEEEEEEeCC--CEEEEEEEEeeccCC--CCcccceeeeeeeEEEeccccccccccc Q lcl|Aclame:pro 544 QQSWSHWDFGDNVTVFAAQVINSTMTVLMSNEH--AVWMGRLHFTKDSID--LPGEPYRLYIDAKRKYTIPAGTYNDDTY 619 (801) Q Consensus 544 ~~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~--~~~~~~~~~~~~~~~--~~~~~~~~~lD~~~~~~~~~~~~~~~~~ 619 (801) |+|||||+|+|.+.++|+...+|+||++|+|++ ++...++.|.++..+ .....+++|||++..+.....+..... T Consensus 547 v~aW~rw~~~~~~~~~~~~~~~d~l~~vv~R~~~~~g~~~~~iE~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~- 625 (806) T protein:vir:10 547 QNAWHKWSFPAGTVLHAVSYSNEKLYLVLTRTNTSGGVAGVYIEVMDMGDELEYGLQDRVRMDRRATLSMTYNATTRVW- 625 (806) T ss_pred EEeEEeeeeCCCeEEEEEEEecCeEEEEEEEcCCcccEEEEEEEeecCCCCCCcccceeeeccccceEEEeccccccce- Confidence 999999999999888898888999999999986 455555555554432 235567899999988876443322221 Q ss_pred ceeeccccccCCcccCceEEEEecCCceeec------cccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEec Q lcl|Aclame:pro 620 QTSISLSTIYGMNFTKGRVSVVFPDGKIVEI------DQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKK 693 (801) Q Consensus 620 ~t~~~~~~~~gl~~l~g~~v~v~~dG~~~~~------~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~ 693 (801) +...+.++.|++++.+.+.+||..+.. ..+...........++ +..+++|+|||+|+++++++||+++. T Consensus 626 ----~~~~l~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~v~~~~~~~-~~~~~~v~vGl~Y~s~~~~t~p~~~~ 700 (806) T protein:vir:10 626 ----TSSALPWLPQDLSSLDAVLVSGWAGYVGGAFQFSYNASNNTISTNFDLA-EGNTATIVVGETYWYEVEPTPPLIKD 700 (806) T ss_pred ----eeeeeccccccccceeEEEEeeccccCCceEEEEEcCccceEeeeeeec-CCCCcEEEEeeeeeEEEEECCeeEec Confidence 223456889999999999988864421 1111111111112222 45678999999999999999999984 Q ss_pred cCCCCccceEEeeeEEEEEEEEEeecceeEEEEeCCCCc--ceeeeeccceeccccccCCccccccceEEEEEeeeccee Q lcl|Aclame:pro 694 TAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSR--EFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTN 771 (801) Q Consensus 694 ~~~~~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~ 771 (801) + +++....+|+||+|+.+++.+||+|.+.+.+.++ +..+...+++.+++.+..+.||+.+|+++||+.+|+++. T Consensus 701 ~----~~~~~~~~r~~l~r~~~~~~~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~~~~~~~ 776 (806) T protein:vir:10 701 S----KDRVSYLDTPTVGNVYLNLDMYPDFSVVVTDKETLQERTVYLANKTAGSITNVIGYIAPHEGTLRIPLRRKSTDV 776 (806) T ss_pred c----CCCccccccEEEEEEEEEeecceeeEEEEcccCCCcceeeeccCcccccccccccccccccceEEEEeeecCcee Confidence 3 3456677999999999999999999999988765 467788999999999999999999999999999999999 Q ss_pred EEEEEECCCCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 772 TVTIESDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 772 ~v~I~~~~P~P~tvlai~weg~y~~r~rrv 801 (801) +|+|+|+.|+||+|+||+|||+||+|+||| T Consensus 777 ~v~i~~d~P~P~tvlai~~eg~y~~r~~rv 806 (806) T protein:vir:10 777 SFKIRSKSPATFQLRDIEWTGSYNPRKRRV 806 (806) T ss_pred EEEEEECCCCceEEEEEEEEEEeecccccC Confidence 999999999999999999999999999999 No 13 >protein:vir:80253 Length: 777 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1879 # MgeName: LKA1 # Cross-refs: genbank:acc:YP_001522886;genbank:gi:158345179;genbank:GeneID:5687516 Probab=100.00 E-value=2.7e-217 Score=1207.87 Aligned_cols=770 Identities=21% Similarity=0.290 Sum_probs=662.9 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~~y~l~ 80 (801) ||+|+++||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++++.......++++|.++++++|+|+ T Consensus 1 M~~i~~~~~nf~~GvS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~~~~e~~~~l~ 80 (777) T protein:vir:80 1 MSYFAGSYRQLLFGVSQQTAKDRLEGQVESQLNMQSDLVTGPRRRSPVHLIADAMAATDANRLAYSLATFSGREVLLLVD 80 (777) T ss_pred CceeeeecchhhcccccCCchHHhhhHHhhhhcceeeeccCceeCcchHhhhhhcCCCcccceeEEEEecCCCeeEEEEE Confidence 99999999999999999999999999999999999999999999999999999998777777788888888999999999 Q ss_pred EeCCeEEEEeCCCcEEEEEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEeccCccc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~irv~~~~g~~~~v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) +++++||||++.|..+.+.+..+|+.+. +.++|+|+|+||+|||+|++++|+++.+.++...+.+..++++++++++|+ T Consensus 81 ~g~g~irv~~~~~g~~~~~~~~~Yl~a~-~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~g 159 (777) T protein:vir:80 81 TLDGTLTILDDATGEVLFTGTNSYLTAG-TGRSIRFAALDDSVFVANTEVIPQTQLWSGASAYPDPTRAGYLYVVAGAFS 159 (777) T ss_pred ecCCeEEEEECCCCeEEEecCCCceeec-cccceeEEEEcCEEEEEeCCccceeeecccCCCccCcccceEEEeeccCCC Confidence 9999999999977777788888998654 567899999999999999999999999988877778889999999999999 Q ss_pred eeEEEEeCCceEE-EEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCcceeE Q lcl|Aclame:pro 161 RRLSIEFNGAERA-AVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWG 239 (801) Q Consensus 161 ~~y~v~i~~~~ta-~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t 239 (801) ++|+|.+++..++ .++.+.++........+..+++.+|.+.+.+.. ......+|.+...++.+++.++++. . T Consensus 160 ~~y~i~i~~~~~~~~~t~~~~t~~~~~~~~~~~~ia~~L~~~~~~~~----~~~s~~~~~~~~~g~~~~i~~~~~~---~ 232 (777) T protein:vir:80 160 KQYRLSITNQVTGVTTSVDVTTSATEASQATGEYVITQLRTAAEADA----TIGTAAGFAYYQDGAYLYVTAPEAI---A 232 (777) T ss_pred ceeeEeecCCcCceeEEEecCCcccccccccchhhhhhhhhhhcccc----ceeecCceEEEeCCcEEEEEecCce---e Confidence 9999999875433 444455666666677788899988876554332 2233457899999999999887654 3 Q ss_pred EEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEEE Q lcl|Aclame:pro 240 LQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWAL 319 (801) Q Consensus 240 it~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~l 319 (801) +++. ++.++.+......+.+.++||..++.++.+.+.+++++ .++||++|+..+++|+||++++...++ ++|||.| T Consensus 233 ~t~~-~g~~~~~~~~~~~v~~~~~lp~~~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~w~e~~~~~~~~~~--~t~p~~l 308 (777) T protein:vir:80 233 VSTD-SGSNFLRASNAASIRDAAELPAKLPADADGFIIATGAA-KNKTYFRWVDLERKWDEDASRGAQAEL--IDMPLRI 308 (777) T ss_pred EecC-CcCccceeeeeEEEeeccccccccccccceEEEeCCCC-CCceEEEEEccCcEEEEeecccccccc--cccceEE Confidence 4444 44556778888899999999999999988888766554 477999999999999999999998877 5999999 Q ss_pred EeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEecCCEEEEEecCCccccccccccccCCCccEE Q lcl|Aclame:pro 320 VRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPID 399 (801) Q Consensus 320 v~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~i~ 399 (801) ++.+ ++|+++.++|++|.+||+++||.|||+|++|++|+||||||+|+||++|||||+||||||+++|++++.|||||+ T Consensus 309 ~~~~-~~~~~~~~~w~~r~~gd~~tn~~Psf~g~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~s~~~~~DdDpI~ 387 (777) T protein:vir:80 309 TYSA-PNFSLTALNYERRASGDATSNPALKFTEQGISGMTTMQGRLVLLAGEYVCMSASGNPLRWFRASVSTQSDDDPIE 387 (777) T ss_pred EecC-CceEeeccCCccccccccccCCCceecCCceeEEEEEcceeeeecCCeEEEEeccCccccccccccCCCCCccEE Confidence 9876 489999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCCeEEEEe-cCCCeEEEE Q lcl|Aclame:pro 400 VAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSS-PRASFTSIN 478 (801) Q Consensus 400 ~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~-~~g~~~~v~ 478 (801) ++++++++++|+|+++++++|+|||+++||+|+|+++|||+|++++++|+|+|+++|+|+.+|++++|++ |.|++++++ T Consensus 388 ~~~ss~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~Fv~~r~g~~s~v~ 467 (777) T protein:vir:80 388 VAATAPVASPYEYAVAFNKDLVLFAKTHQGLVPGANLLTSRNATAAVVTEYSFQNSCSPVVAGRTVFFASPRSGPWSAVW 467 (777) T ss_pred EEEcCCcceeeeeeeecCCcEEEEecCceEEEeCCCcccceeEEEEEEEeeccCCCCCceEeCCeEEEEecCCCceeEEe Confidence 9999999999999999999999999999999999999999999999999999999999999999999996 567789999 Q ss_pred EEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceEE Q lcl|Aclame:pro 479 RYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTV 558 (801) Q Consensus 479 ~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~ 558 (801) ||++.++.+|+|+++|||+|++|||+++|.+++++++|++++|++ +++|+|++|||||+++||+|+|||||+|+|++++ T Consensus 468 e~~~~~~~~d~y~a~Dlt~~~~hl~~~~v~~~a~s~~p~~v~~~~-~~dg~l~~~ty~~~~~e~~v~aW~r~~~~g~v~~ 546 (777) T protein:vir:80 468 EMLPSQYTDAQVEASDSTSHLPKYIAGPVRFLATSSTTSIVVVGT-SNLRELVVHEYLWQGGEKVHAAWHKWSFPQDITG 546 (777) T ss_pred eeeecccccCceehhHHHHHHHHhcCCceEEEEEcCCCceEEEEE-cCCCeEEEEEEeecCCceEEEeeEEeccCCcEEE Confidence 999888888999999999999999999999999999999998766 5669999999999999999999999999999998 Q ss_pred EEEEEcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCceE Q lcl|Aclame:pro 559 FAAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRV 638 (801) Q Consensus 559 ~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~ 638 (801) +|+ .+|+||++|+|++..++|||.... ..|.+.+. .+||||+... ..++......+ ..++.|+.+.. T Consensus 547 v~~--i~d~l~~iv~r~~~~~le~~~~~~-~~d~~~~~-~~~~D~~~~~---~~~~~~~~~~~------~~~~~~~~~~~ 613 (777) T protein:vir:80 547 AYF--RGDRLILLFHVAGRVILGELFMQR-LGDAQSIP-GGFLDLYRVG---AANADEEVAIP------AFAADLYPEDS 613 (777) T ss_pred EEE--ECCEEEEEEEcCCeEEEEEEeecc-CCCCcccc-eeeeeeeeee---eeeeCCcccee------EeeccccCCcc Confidence 886 499999999999999999996543 34444444 4899986532 22333322222 23455544443 Q ss_pred -EEEecCCceeecc---ccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEE Q lcl|Aclame:pro 639 -SVVFPDGKIVEID---QPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAW 714 (801) Q Consensus 639 -v~v~~dG~~~~~~---~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~ 714 (801) ..+..+|...... ...........+++++++++++|+|||+|+++++++||+++.++| +....+|+||+|++ T Consensus 614 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g----~~~~~~r~~i~r~~ 689 (777) T protein:vir:80 614 TFAYKLSGEFQSLGQRCGDRRVDGATVYIKVVGAQAGDQYRIGLRYLSKLGPTRPILRDPNG----VPITTERTQLHRLT 689 (777) T ss_pred eeEEEecCcccccceeeeeEEeCCceeeEEEcCCCCCCEEEEeeeeEEEEEeCceEEeCCCC----ceeeecCeEEEEEE Confidence 3333333211110 001111122347888899999999999999999999999995543 56677899999999 Q ss_pred EEeecceeEEEEeCCCCcc-eeeeeccceeccccccCCccccccceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEE Q lcl|Aclame:pro 715 VNYEDSGAFIIRVNNLSRE-FIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGN 793 (801) Q Consensus 715 v~~~~tg~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~ 793 (801) |+|.+||+|.+++++..++ .++.+.+.+++++.+..+.|++.+|+++||+.+|+++.+|+|++++|+||+|+||+|||+ T Consensus 690 ~~~~~sg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~~~~~~~~v~i~~d~P~P~tilsi~~e~~ 769 (777) T protein:vir:80 690 WSLDSTGEVTFRVADQARGESAYTTTPLRLYSRDLGAGLPLAATATLDTPARVDMQTAQFSLETDDYYDMNITSLEYGFR 769 (777) T ss_pred EEeeccccEEEEEcCCCCcceeeeecCceecccccccccccccceEEEEEEeecCcceEEEEEECCCCceEEEEEEEEEE Confidence 9999999999999988775 678899999999999999999999999999999999999999999999999999999999 Q ss_pred EeccccCC Q lcl|Aclame:pro 794 YLRRSSGI 801 (801) Q Consensus 794 y~~r~rrv 801 (801) ||+|+||= T Consensus 770 y~~r~~r~ 777 (777) T protein:vir:80 770 YNQRYRRQ 777 (777) T ss_pred eecccccC Confidence 99996666 No 14 >protein:vir:6326 Length: 826 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:132 # MgeName: phiKMV # Cross-refs: genbank:acc:NP_877473;genbank:gi:33300845;uniprot:Q7Y2D1;genbank:GeneID:1482615 Probab=100.00 E-value=4.5e-216 Score=1201.20 Aligned_cols=774 Identities=21% Similarity=0.291 Sum_probs=642.9 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCC-ceEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEF-EQYFV 79 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~-~~y~l 79 (801) ||+|+|+||||++|||||+|++|||+||++|+||+|+|+|||+||||++||++++++.....++++|.++|++. |+||+ T Consensus 1 M~~i~~s~~n~~~GvSqq~d~~r~~~q~~~~~N~~~~~~~G~~rRpg~~~v~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 80 (826) T protein:vir:63 1 MSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLV 80 (826) T ss_pred CceeeeecchhhcceeccCchHhhhhhhhhhhcceeeccCCcccCchhHhhhhhccCCccccccEEEEEecCCCceEEEE Confidence 99999999999999999999999999999999999999999999999999999988766667788888889755 46888 Q ss_pred EEeCCeEEEEeCCC-cEEEEEcc-CccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEeccC Q lcl|Aclame:pro 80 VFTGEDIKVFDLDG-KEYQVRGD-RSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGG 157 (801) Q Consensus 80 ~~~~~~irv~~~~g-~~~~v~~~-~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 157 (801) +|++|+||||+++| ..+.+... .+|+ +++++++|+++|+||+|||+|++++|++..+.. ...++..+++++++++ T Consensus 81 ~~~~g~irv~~~~~g~~~~~~~~~~~y~-~~~~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~--~~~~~~~~~~~~v~~g 157 (826) T protein:vir:63 81 AQHRGELYLFDERDGRLLMGQPLVHDYL-KANDYRQLRAATVADDLFIANLSVKPEADRTDI--KGVDPNKAGWLYIKAG 157 (826) T ss_pred EecCCcEEEEEcCCCeEEEcCCCCCcee-eecCccceEEEEeCCEEEEEeCCeeeeeccccc--cccCCCCcEEEEeecc Confidence 99999999999754 44455443 4454 457889999999999999999999999866533 2344678899999999 Q ss_pred ccceeEEEEeCCc---------eEEEEEeecCCCcc-----cceeeehhhHHHHHHHhhhhccc---------ceeeeec Q lcl|Aclame:pro 158 QYGRRLSIEFNGA---------ERAAVQLPDGSQPA-----HVNEVDGQAIAEKLAAQLRNNLG---------NPNNDQD 214 (801) Q Consensus 158 ~y~~~y~v~i~~~---------~ta~~ttp~~t~~~-----~~~~~~~~~ia~~l~~~~~a~~~---------~~~~~~~ 214 (801) +|+++|+|++++. .+++++|+.+.... .....+.++++.++...+.+... ....... T Consensus 158 ~Y~~~y~vti~~~~~~~gt~~s~t~t~~t~~~~~a~~~~~~~~~~~s~~yia~~l~~~~~a~~~~~~~~~t~~~~~~~~~ 237 (826) T protein:vir:63 158 QYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPD 237 (826) T ss_pred ccCceEEEEEEeccccCCccccceEEEEeccCCcccccccccceeeeeeeeeeeceeeeeeccccccCCCccccceecCC Confidence 9999999999862 34677777664332 12334556666655433222100 0000000 Q ss_pred -------cccEEEEecCceEEEEeCCCcceeEEEE-ecCCCcceeeeeeeeccccccccccccCC----eEE----EEee Q lcl|Aclame:pro 215 -------PNKWRFNVGPGFIHILAPNNDNVWGLQT-KDGYADQLINPVTHYTQSFQKLPINAPDG----YIV----KIVG 278 (801) Q Consensus 215 -------~~~~~~~~~~~~~~i~~~~~~~~~tit~-~dg~~~t~~~~~~~~v~~~~~lp~~~~~g----~~v----~i~~ 278 (801) ...+.....++++++...+.. ++.. .+++....+...+..++++++||+.++++ +.+ .+.+ T Consensus 238 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~ 314 (826) T protein:vir:63 238 ANAATIAGYLNQRGVQDGYIAFRGDADI---HVEVSTDMGNNYGIASGGMSLNATADLPALLPGVGAPGVGVQFMDGAVM 314 (826) T ss_pred cccceeecceeEecccccEEEEeeCCcc---cEEEccCCCCcceEEEEEeeccceeeccccCCCcccceEEEeeEEeEEe Confidence 001122233455555544332 2222 23455566778888999999999888763 332 2445 Q ss_pred cCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEEEE-eccCCeEEEeecccCcccCCCccccCCchhcCCCceE Q lcl|Aclame:pro 279 DTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALV-RASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTIND 357 (801) Q Consensus 279 ~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv-~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~ 357 (801) ..+...+.||++|+...++|+||++|+... ..++|||.|+ +.++++|+++.++|++|.+||+++||+|||+|+||++ T Consensus 315 ~~g~~~d~~y~~~~~~~~~w~e~~~~~~~~--~~~tmp~~l~~~~~~~~f~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~ 392 (826) T protein:vir:63 315 ATGSTKAPVYFEWDSANRRWAERAAYGTDW--VLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFVTRGITG 392 (826) T ss_pred cCCCcccceEEEEEcCCceEEEEeecCccc--ccccceEEEEEeccCCeEEEeccccccccccccccCCCccccCCCceE Confidence 566777899999999999999999999754 5579999998 5789999999999999999999999999999999999 Q ss_pred EEEEcCceEEecCCEEEEEecCCccccccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCccc Q lcl|Aclame:pro 358 IFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDIL 437 (801) Q Consensus 358 v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~l 437 (801) |+||||||+|++|++|||||+||||||+++|++++.|||||+++++++++++|+|+++++++|+|||+++||+|+++++| T Consensus 393 v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~s~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~~~q~~ls~~~~l 472 (826) T protein:vir:63 393 MTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIV 472 (826) T ss_pred EEEEeceEEEeeCCeEEEEccCCccccccccccCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccceEEEEEeeecccCCCCcEEeCCeEEEEecCC-CeEEEEEEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCC Q lcl|Aclame:pro 438 SSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRA-SFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAE 516 (801) Q Consensus 438 TP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g-~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~ 516 (801) ||+|++++++|+|+|++.|+|+.+|+.++|+|++| +|++++||++..+.++.|++.|||+|++|||++++.+|+++++| T Consensus 473 TP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~s~v~e~~~~~d~~~~y~~~dlt~~~~~l~~~~v~~~a~s~~~ 552 (826) T protein:vir:63 473 TPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASS 552 (826) T ss_pred cceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeeccccceehhHHHHHHHHhcCCCeEEEEEcCCC Confidence 99999999999999999999999999999999887 68999999988888778999999999999999999999999999 Q ss_pred CeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceEEEEEEEcCCEEEEEEEeCCCEEEEEEEE-eec---cCCC Q lcl|Aclame:pro 517 NFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMSNEHAVWMGRLHF-TKD---SIDL 592 (801) Q Consensus 517 ~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~-~~~---~~~~ 592 (801) ++++|+ ++++|+|++|+|||+++||+|+|||||+|+|+++++|+. +|+||++|+|+++++++||.+ .++ ..+. T Consensus 553 ~~v~~~-~~~dg~l~~~~y~~~~~e~~v~aW~~~~~~g~v~~~~~i--~d~l~~iv~r~~~~~~~r~~~e~~~~~~~~~~ 629 (826) T protein:vir:63 553 GYLVFG-TSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFT--GDNLMVLIQKGQEIALGRMHLNSLPAREGLQY 629 (826) T ss_pred CEEEEE-EcCCCEEEEEEEeeCCCcEEEEeEEEEecCCcEEEEEEE--CCeEEEEEEeCCCEEEEEEEEEecCCcccccc Confidence 998765 467899999999999999999999999999999887764 899999999999999999854 333 3445 Q ss_pred CcccceeeeeeeEEEecccccccccccceeeccccccCCcccCceEEEEecCCceeeccccccccccCc--EEEEcCCcc Q lcl|Aclame:pro 593 PGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDP--MLRLDGNQE 670 (801) Q Consensus 593 ~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~--~~~l~~~~~ 670 (801) +.+++..++||...+...... .....++.|+++..+.+.+||.+....... .++.++ ++++|+++. T Consensus 630 ~~~d~~~~~d~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~v~l~~~~~~~ 697 (826) T protein:vir:63 630 PKYDYWRRIEATVAGELELTK-----------QHWDLIKDASAVYQLQPVAGAYMERTHLGV-KRETNTKVFLDVPEAVV 697 (826) T ss_pred CCccceEEEEEeeeeeeccCc-----------ceeecccCcccccEEEEeeCccccCCccce-EEecCCEEEEecCCCcc Confidence 666778889987655331110 011237899999999999999876543222 233344 466789999 Q ss_pred CceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEeecceeEEEEeCCCCcc--eeeeeccceeccccc Q lcl|Aclame:pro 671 GQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSRE--FIYTMAGARLGSDNL 748 (801) Q Consensus 671 ~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~--~~~~~~~~~~~~~~~ 748 (801) +++|+|||+|+++++++||+++.++++ .+..+|+||||++++|.+||+|.++|++..++ ..+.+.+.+++.+.+ T Consensus 698 ~~~v~VGl~y~s~~~~~~~~~~~~~g~----~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~ 773 (826) T protein:vir:63 698 GAVYVVGCEFWSKVEFTPPVLRDHNGL----PMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQL 773 (826) T ss_pred ccEEEEeeeeeEEEEecceEEEccCCC----cceeccEEEEEEEEEeeccccEEEEecCccccceeEeecCCceeccccc Confidence 999999999999999999999976664 34568999999999999999999999998775 356788899999999 Q ss_pred cCCccccccceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 749 RVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 749 ~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r~rrv 801 (801) ..|.|++.++++++|+.+++++.+|+|+|+.|+||+|++|+|||+||+|+||| T Consensus 774 ~~g~p~~~t~~~~vP~~~~~~~~~i~i~~d~P~p~~il~i~~~~~yn~r~rrv 826 (826) T protein:vir:63 774 NAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV 826 (826) T ss_pred ccccccccceEEEEEEeeccceEEEEEEeCCCCcEEEEEEEEEEEEeceeecC Confidence 99999999999999999999999999999999999999999999999999999 No 15 >protein:vir:100022 Length: 976 # NCBI annotation: T7-like tail tubular protein B # Family: family:all:825 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214208;genbank:gi:61806431;genbank:GeneID:3294702 Probab=100.00 E-value=1.1e-212 Score=1182.60 Aligned_cols=773 Identities=23% Similarity=0.368 Sum_probs=645.0 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcc----cceEEEEEEeCCCce Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVG----AQPYVHLINRDEFEQ 76 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~----~~~~~~~f~~~~~~~ 76 (801) ||+|+|+||||++|||||||.+|+||||++|+||+|||+.||+||||++||+.|.++.... .+.+||+++|+++|+ T Consensus 1 M~~v~~si~nl~~GvSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRp~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~~~e~ 80 (976) T protein:vir:10 1 MASVTQTIPTLTGGLSQQPDELKIPGQVSVANNVIPDVTHGLLKRPGGKLVASISDNGTAALNSQTNGKWFSYYRDETES 80 (976) T ss_pred CcceeecchhhhCcceecchhhcCCchhhhhhccccccccccccCCcceeeeeecCCCcccccccccceEEEEEcCCCcE Confidence 9999999999999999999999999999999999999999999999999999998765433 256789999999999 Q ss_pred EEEEEe-CCeEEEEeC-CCcEEEEEccCcc------ccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCc Q lcl|Aclame:pro 77 YFVVFT-GEDIKVFDL-DGKEYQVRGDRSY------VRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQG 148 (801) Q Consensus 77 y~l~~~-~~~irv~~~-~g~~~~v~~~~~y------~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~ 148 (801) |++.+. +|.++|||+ +|.+++|+..... +.++++.++|++++++|++||+|+++.|++.....+ ...+ T Consensus 81 y~~~~~~~g~~~v~~~~~G~~~~v~~~~~~~~~~~~yl~~~~~~~~~~~tv~d~tfi~N~~~~~~~~~~~~~----~~~~ 156 (976) T protein:vir:10 81 YIGQVSRSGDINMWRCSDGQAMTVNYDSGTATALTTYLTHTNDEDIQTLTLNDYTFLTNRTKTVAMSSTVEP----VRPP 156 (976) T ss_pred EEEEEecCCceEEEEccCCeEEEEEcCCCcccccchhhccCCcceeEEEEEccEEEEecCceEEeecccccC----CCCc Confidence 999987 567999998 7999999866542 223578899999999999999999999998655443 3456 Q ss_pred cEEEEeccCccceeEEEEeCCceEE---EEEeecCC----Ccc-----c------------------------------- Q lcl|Aclame:pro 149 DALINVRGGQYGRRLSIEFNGAERA---AVQLPDGS----QPA-----H------------------------------- 185 (801) Q Consensus 149 ~~~~~v~~g~y~~~y~v~i~~~~ta---~~ttp~~t----~~~-----~------------------------------- 185 (801) .|+++|++++|+|+|+|+|++...+ +++++... .+. . T Consensus 157 ~~~~~v~~~~y~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~s~~~G~~~~~~~v 236 (976) T protein:vir:10 157 EVFIDLKATAYARQYAVNLFDNTTTTAVSTVTRIDVELIKSSNNYCDSNGAMVARTSRPSNSTRCDDSAGDGRDAYAPNV 236 (976) T ss_pred eEEEEeeeeccceEEEEEEcCCcccceeeeeeeeeeccccCCcccccccccchhhHhHhhhhhcccccccccccccCcee Confidence 7999999999999999999765322 22221000 000 0 Q ss_pred ---cee-------------------------------------------------------------------------- Q lcl|Aclame:pro 186 ---VNE-------------------------------------------------------------------------- 188 (801) Q Consensus 186 ---~~~-------------------------------------------------------------------------- 188 (801) ... T Consensus 237 ~~~~f~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~Y~~~y~~~~~v~~~ 316 (976) T protein:vir:10 237 GTKVFNVTDGASLTDEANSGSYTYTIDVKDSSNNSVNRGVNLYFRIRTVGQSVPFTTGSGSSATTTYQARYTTTFDLLYG 316 (976) T ss_pred eeeEEEeccCccceEcCCcceEEEEeeccccceEEeecCCceEEEEccccceeecccccccceeeeeeEEEEeEEEEecC Confidence 000 Q ss_pred --------------------------------------------------eehhhHHHHHHHhhhhcccceeeeeccccE Q lcl|Aclame:pro 189 --------------------------------------------------VDGQAIAEKLAAQLRNNLGNPNNDQDPNKW 218 (801) Q Consensus 189 --------------------------------------------------~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~ 218 (801) ..+++++.+|...+.+ .....++ T Consensus 317 ~~g~~~~~~~~V~v~g~~Y~it~~~~~~~~~~a~~~~~~~~~t~~d~~~~~~~~~ia~~L~~~l~a-------~~~~~g~ 389 (976) T protein:vir:10 317 GTGWQEGDYFYVWMKDGYYKITVEAISTANVQANLGLIRPNPTPFDTETAVTAESIIGDIRTAIIA-------TGNFTSA 389 (976) T ss_pred CCCcccCceEEEEccccceeeEEEEeeceeEEeccccccCcCCcCcccccccHHHHHHHHHHhhcc-------cccccce Confidence 0000011111110000 0111334 Q ss_pred EEEecCceEEEEeCCCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCC--- Q lcl|Aclame:pro 219 RFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNR--- 295 (801) Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~--- 295 (801) .+...++.+++.++++. +++++. +++.+..++++|+++++||..|++|++|+|.+ +++..|+||++|+..+ T Consensus 390 tv~~~g~~~~i~~~~~~--~~~s~~---~~~~~~~~~~~V~~~~~LP~~~~~g~~v~V~~-~~~~~d~yyv~~~~~~~~~ 463 (976) T protein:vir:10 390 NVQQIGTGLYVTRPSGT--FNVTAP---SSDLLRVMSGEVANVDDLPSQCKHGYVVKVAN-SEADADDYYVKFFGHNNRD 463 (976) T ss_pred EEEEcCcEEEEEecCcc--eEecCC---CceeEEEEEeeecchhhhhhhccCCcEEEEec-CCCCceeEEEEeecccccc Confidence 56667778888777653 443333 34578999999999999999999999999844 5557799999997654 Q ss_pred --eEEEEEeccceeeeEeeccccEEEEeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEecCCEE Q lcl|Aclame:pro 296 --KVWVETIGWNTRTHLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENI 373 (801) Q Consensus 296 --~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v 373 (801) ++|+||++++..++++.++|||.|++.++++|++++++|+.|.+||+++||+|||+|++|++|+||||||+|++|++| T Consensus 464 ~~~~w~E~~~~g~~~g~~~~tmP~~l~~~~~g~f~~~~~~w~~r~vGd~~tnp~psf~g~~is~v~f~q~RL~f~s~~~v 543 (976) T protein:vir:10 464 GDGVWEECAKPSRNIEFDKGTMPIQLVRQANGTFTVSQATWQNAEVGDELTNPNPSFVGKTINQLVFFRNRLVFLSDENV 543 (976) T ss_pred ccceEEEeeccccccccccccccEEEEecccCeEEeeeccccccccCCcccCcCceecccccceEEEEcceEEEecCCeE Confidence 589999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEecCCccccccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCC-ccccccceEEEEEeeecc Q lcl|Aclame:pro 374 ILSRTSKYFNFFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTAS-DILSSRSVGLNLTTQFDV 452 (801) Q Consensus 374 ~~S~~gd~~nF~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~-~~lTP~~~~i~~~s~~~~ 452 (801) ||||+||||||+++|++++.|||||++++++++++.|+|+++++++|+|||+++||+|+++ ++|||+|++++++|+|+| T Consensus 544 ~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~e~~lsg~~~~lTP~t~~i~~~s~~~~ 623 (976) T protein:vir:10 544 IMSRPGEFFNFWSKTATTFTPQDVIDLSCSSTYPAIVYDGIQVNAGLLLFTKNQQFMLTTDSDILSPETAKINAVSSYNF 623 (976) T ss_pred EEEecCCccccccccccCCCCCccEEEEecCCcceeeEEEEecCCcEEEEecCceEEEecCCceecceeEEEEEEEeeec Confidence 9999999999999999999999999999999999999999999999999999999999985 599999999999999999 Q ss_pred cCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEE Q lcl|Aclame:pro 453 QDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYI 532 (801) Q Consensus 453 ~~~v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~ 532 (801) ++.|+|+.+|+.++|+|++|+++|++||.+..+ .++|++.|||+|++|||+|.+..++++++ +.+++|+++++|+|++ T Consensus 624 ~~~v~Pv~vG~~v~Fv~~~g~~~r~~~~~~~~~-~~~~~~~dlt~~~~~l~~g~~~~~a~~~~-~~~vv~~~~~~g~l~~ 701 (976) T protein:vir:10 624 NEKTHPVSLGTTVAFIDNANQFTRFFEMSNVVR-QGEPDVVDQSKVISRLLDKNISLVSVSRE-NSVVFFSQKDTDKIYC 701 (976) T ss_pred cCCCccEEeCCeEEEEecCCCeEEEEEEeeccc-ccccchhHHHHHhhhhcCCceEEEEEcCC-CcEEEEEEcCCCEEEE Confidence 999999999999999999999999999977665 47899999999999999998877766665 5555677889999999 Q ss_pred EEeeeCCCceEEEEEEeeecCCceEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeeccCCC------------Ccccceee Q lcl|Aclame:pro 533 YKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDL------------PGEPYRLY 600 (801) Q Consensus 533 ~ty~~~~~e~~~~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 600 (801) |+|||+++||+|+|||||+++|+++++|+. +|+||++|+|+++++++||.|.+++... ....|++| T Consensus 702 ~ty~~~~~eq~v~aWsr~~~~G~v~sv~~i--~D~ly~vV~r~~~g~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (976) T protein:vir:10 702 FRYFTSGEKRLLQAWTTWTITGNIQYHCML--DDALYVVTRNNNKDQIVKYSLKLDDAGHFVTDTQGTTSTDDDSIYRVH 779 (976) T ss_pred EEEeecCCceeEEeeEEEecCCcEEEEEEe--CCeEEEEEEecCCeEEEEEEEEECCccceeeeccCccccccCCcceee Confidence 999999999999999999999999998864 8999999999999999999987764211 24466789 Q ss_pred eeeeEEEecccccccccccceeeccccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEee Q lcl|Aclame:pro 601 IDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNI 680 (801) Q Consensus 601 lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y 680 (801) ||++..+++.+++|++.+..+....+.+.+ +.++.+...+||.... ......++.+++++|++++++++|||||+| T Consensus 780 lD~~~~~~~~~~t~~~~t~~t~~~~~~~~~---~~~~~~~~~~d~~~~~-~~~~~~~v~g~~i~l~g~~~~~~v~VGl~Y 855 (976) T protein:vir:10 780 LDHSSSVTAASNTYNTTTIKTTIPKPNGYE---STKQLVAYDTDAGNDL-GRYALVTVSGSNLEIPGNWSNNSFIIGYLY 855 (976) T ss_pred eccceEEEeccccccCCceeEEeecCcccc---CceeEEEEecccCccc-ccceeeeecCCeeEecCCCCCCeEEEeeee Confidence 999999999999999999988888876544 5677788888875432 233445788899999999999999999999 Q ss_pred eEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEeecceeEEEEeCCCCcce-eeeeccceeccccccCCccccccc- Q lcl|Aclame:pro 681 PFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREF-IYTMAGARLGSDNLRVGGSNIGTG- 758 (801) Q Consensus 681 ~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~tg- 758 (801) +++++|+||+++.+++++ ......+||+|||++++|.+||.|.+.+++.+++. ......... .....+.+|+.++ T Consensus 856 ~s~~~~~~~~i~~~~g~~-~~~~~~gRl~i~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~--~~~~~~~~pl~~~~ 932 (976) T protein:vir:10 856 EMDVQLPTLYVTQQVGDK-YRSDAKSSLIVHRIKFSFGPLGVYSTTIQRDGKPDFTETKELGLA--GVVGASRLPIVPEV 932 (976) T ss_pred EEEEeecceeEEeCCCCc-ccccceeeEEEEEEEEEeecccceEEEEcCCCCcccccccccccc--CcccccccceecCc Confidence 999999999999887765 45677899999999999999999999998877653 232222222 2334455677665 Q ss_pred eEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEecc-ccCC Q lcl|Aclame:pro 759 QYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRR-SSGI 801 (801) Q Consensus 759 ~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r-~rrv 801 (801) .++||+.+|+++.+|+|+|+.|+||+|++|+|||+||+| +||| T Consensus 933 ~~~vP~~~~~~~~~v~i~~d~PlP~tilsi~~eg~yn~r~~r~~ 976 (976) T protein:vir:10 933 IETVPCYERNTNLKVNVKSEHPAPATLYSLAWEGDFTNRFYKRV 976 (976) T ss_pred EEEEEeccCCceeEEEEEECCCCceEEEEEEEEEEeccceeecC Confidence 488999999999999999999999999999999999999 6777 No 16 >protein:vir:78957 Length: 826 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1860 # MgeName: LKD16 # Cross-refs: genbank:acc:YP_001522826;genbank:gi:158345061;genbank:GeneID:5687447 Probab=100.00 E-value=2.2e-212 Score=1180.98 Aligned_cols=777 Identities=21% Similarity=0.295 Sum_probs=624.2 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCC-ceEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEF-EQYFV 79 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~-~~y~l 79 (801) ||+|+|+||||++|||||+|++|||+||++|+||+|+|+|||+||||++||++++++......++.|.++|+++ |+|+| T Consensus 1 M~~i~~~~~nl~gGvSqq~d~~r~~~q~~~~~N~~~~~~gG~~rRpgt~~va~~~~~~~~~~~~f~~~~~r~s~e~~~~l 80 (826) T protein:vir:78 1 MSYKQSAYPNLLMGVSQQVAFERLPGQLSEQINMVSDPVSGLRRRSGIELMASLLHTDQPWPRPYLYHTNLGGRSIAMLV 80 (826) T ss_pred CcceeeecchhccceecccchHhhhhhhhhhhcceeccccccccCCchHhhhhhccCCcCCceeEEEEeccCCcceEEEE Confidence 99999999999999999999999999999999999999999999999999999987755444455555666655 56888 Q ss_pred EEeCCeEEEEeCC-CcEEEEEc-cCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEeccC Q lcl|Aclame:pro 80 VFTGEDIKVFDLD-GKEYQVRG-DRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGG 157 (801) Q Consensus 80 ~~~~~~irv~~~~-g~~~~v~~-~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 157 (801) ++++|+||||++. |..+..+. ...|+.+. +.++|+++|+||+|||+|++++|++..... ...++..+++++++++ T Consensus 81 ~~~~g~irv~~~~~g~~~~~~~~~~~y~~~~-~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~--~~~~~~~~~~~~v~~g 157 (826) T protein:vir:78 81 AQHRGELYLFDEKDGRLLMGQPLVHDYLKAS-DYRQLRAATVADDLFIANLEVRPEADKADV--LGVDPSKTGWLYIKAG 157 (826) T ss_pred EEcCCcEEEEECCCCEEEEecCcccceeecC-CcceeEEEEEcCEEEEEcCcEeeeeccccc--cCCCCCceEEEEeccc Confidence 9999999999864 54443332 34566554 557899999999999999999999754332 2345678899999999 Q ss_pred ccceeEEEEeCCc---------eEEEEEeecCCCc-----ccceeeehhhHHHHHHHhhhhcccceeee----------- Q lcl|Aclame:pro 158 QYGRRLSIEFNGA---------ERAAVQLPDGSQP-----AHVNEVDGQAIAEKLAAQLRNNLGNPNND----------- 212 (801) Q Consensus 158 ~y~~~y~v~i~~~---------~ta~~ttp~~t~~-----~~~~~~~~~~ia~~l~~~~~a~~~~~~~~----------- 212 (801) +|+++|+|++++. .++++.+++++.. ......+..++++++.....+........ T Consensus 158 ~y~~~y~v~i~~~~~~~~~~~s~t~~y~t~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~t~~~~~~~~~ 237 (826) T protein:vir:78 158 QYSKAFSLTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLFGKFFGAPEYTLPNSTKKYPKVDPD 237 (826) T ss_pred ccCceeEEEeccceeecccccceeEEEEeccCCccccccccccceecchhhheecceeeccccceeeeccceeEeecccc Confidence 9999999999862 3467777776543 23344556677777654322211110000 Q ss_pred ---ecccc--EEEEecCceEEEEeCCCcceeEEEEecCCCcceeeeeeeecccccccccccc----CCeEEE----Eeec Q lcl|Aclame:pro 213 ---QDPNK--WRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAP----DGYIVK----IVGD 279 (801) Q Consensus 213 ---~~~~~--~~~~~~~~~~~i~~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~----~g~~v~----i~~~ 279 (801) ....+ ......++++++.+.++.. .. .+.+++.+..+......++.+++||+.++ +|+.+. +... T Consensus 238 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~g~~~~~~~~~~~v~~~~~l~a~~p~~~~~~~~~~~~~~~~~~ 315 (826) T protein:vir:78 238 PAAATVAGYLNQRGVQDGYIAFRGDGDIV-VE-VSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGTGVQFMDGAIMA 315 (826) T ss_pred ccceeeccceeecccccceEEEecCCCeE-EE-eccCCCccceEEEeeEEEecccceeeeecccccceEEEEEEeeeEec Confidence 00000 0111223445554443322 22 23345555666777778888888865554 555544 4455 Q ss_pred CCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEEEE-eccCCeEEEeecccCcccCCCccccCCchhcCCCceEE Q lcl|Aclame:pro 280 TSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALV-RASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDI 358 (801) Q Consensus 280 ~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv-~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v 358 (801) .+...++||++|+..+++|+||+++|+. ++.++|||.|+ +.++++|+++..+|++|.+||+++||.|||+|++|++| T Consensus 316 ~g~~~~~~y~~~~~~~~~w~e~a~~g~~--~~~~tmp~~l~~~~~~~~f~~~~~~w~~r~~gd~~tnp~psf~g~~i~~v 393 (826) T protein:vir:78 316 TGSTKAPVYFAWDAANRRWAERAAYGTD--WVLKKMPLALRWDESTDTYSLNELEYDRRGSGDEETNPTFNFVKRGITGM 393 (826) T ss_pred CCCcccceeEEEEcCCceEEEeeccCcc--cccccccEEEEEecCCCeEEEeeccccccccCcccccCcccccCCCceEE Confidence 6677899999999999999999999975 67789999998 56799999999999999999999999999999999999 Q ss_pred EEEcCceEEecCCEEEEEecCCccccccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCcccc Q lcl|Aclame:pro 359 FFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILS 438 (801) Q Consensus 359 ~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~lT 438 (801) +||||||+|++|++|||||+||||||++++++++.|||||+++++++|++.|+|+++++++|+|||+++||+|+++++|| T Consensus 394 ~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~~s~~~~~i~~~v~~~~~L~l~T~~~e~~l~~~~~lT 473 (826) T protein:vir:78 394 TTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVT 473 (826) T ss_pred EEEeceEEEeeCCeEEEEeccCccccccccccCCCCCCcEEEEEccCcceeEEEEEecCCcEEEEecCcEEEEeCCCccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceEEEEEeeecccCCCCcEEeCCeEEEEecCC-CeEEEEEEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCC Q lcl|Aclame:pro 439 SRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRA-SFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAEN 517 (801) Q Consensus 439 P~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g-~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~ 517 (801) |+|++++++|+|+|++.|+|+.+|++++|++++| +|++++||++..+.++.|+++|||+|++|||++++.+|+++++|+ T Consensus 474 P~~~~~~~~s~~~~~~~~~Pv~vG~~v~F~~~r~~~~s~v~e~~~~~~~~~~y~~~dlt~~~~~l~~~~v~~~a~s~~~~ 553 (826) T protein:vir:78 474 PRTAVISITTQYDVDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSG 553 (826) T ss_pred ceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeecccCccchHHHHHHHHHhcCCCeEEEEEeCCCC Confidence 9999999999999999999999999999998877 589999999888887789999999999999999999999999999 Q ss_pred eEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeecc----CCCC Q lcl|Aclame:pro 518 FVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMSNEHAVWMGRLHFTKDS----IDLP 593 (801) Q Consensus 518 ~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~----~~~~ 593 (801) +++| +.+++|+|++|||+++++||+|+|||||+++|+++++|+. +|+||++|+|+++++++||.+.... .+.. T Consensus 554 ~~v~-~~~~~g~l~~~ty~~~~~e~~v~aW~~~~~~g~v~~v~~i--~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~ 630 (826) T protein:vir:78 554 YLVF-GTSAADEMICHQYLWQGNEKVQNAYHRWTLRHQIIGAYFT--GDNLMVLIQKGQEIALGRMHLNSLPAREGLQYP 630 (826) T ss_pred eEEE-EEcCCCeEEEEEEEecCCcEEEEeEEEEccCCcEEEEEEE--CCeEEEEEEeCCCEEEEEEEEEecCCCcccccc Confidence 9775 5678899999999999999999999999999999988764 8999999999999999999654332 2222 Q ss_pred cccceeeeeeeEEEecccccccccccceeeccccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCce Q lcl|Aclame:pro 594 GEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQV 673 (801) Q Consensus 594 ~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 673 (801) .++ ++.++...+.. ... .+......+....++.|++|+.+.+..++.+... ..+....++++|+++.+++ T Consensus 631 ~~~--~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~ 700 (826) T protein:vir:78 631 KYD--YWRRIEATVDG---ELE-LTKQHWDLIKDGAAVYQLQPQVGAYMERYQLGVK----RETSTKVFLDVPEAVVGSV 700 (826) T ss_pred ccc--eeEEEEEEEcc---eec-cccceeEEecCCceeeeeccceeeeccccceecc----ccCCCceEEEeCCCccccE Confidence 222 23333222211 111 1111122233345678899988887777765421 2233345689999999999 Q ss_pred EEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEeecceeEEEEeCCCCcce--eeeeccceeccccccCC Q lcl|Aclame:pro 674 VYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREF--IYTMAGARLGSDNLRVG 751 (801) Q Consensus 674 v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~ 751 (801) |+|||+|+++++++||+++.+++. ....+|+||||++|+|.+||.|.+.+++..++. .+...+.+++.+.+..+ T Consensus 701 v~VGl~y~s~~~~~~~~~~~~~g~----~~~~~r~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~l~~g 776 (826) T protein:vir:78 701 YVVGCEFWSKVEFTPPVLRDHNGL----PMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLSSRQLNAG 776 (826) T ss_pred EEEeeceeEEEEeCceEEecCCCc----ceeecceEEEEEEEEeeccccEEEEeCCCccCcceeeeecccccccccccCC Confidence 999999999999999999976654 456789999999999999999999999888763 35566667777777778 Q ss_pred ccccccceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 752 GSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 752 ~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r~rrv 801 (801) .|+..++++++|+.+++++.+|+|+++.|+||+|++|+|||+||+|+||| T Consensus 777 ~~~~~t~~v~vp~~~~~~~~~i~i~~d~P~P~tvlai~~~~~y~~r~rrv 826 (826) T protein:vir:78 777 EPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV 826 (826) T ss_pred cccccceEEEEeeeccCceEEEEEEeCCCCcEEEEEEeEEEEecceeecC Confidence 88888999999999999999999999999999999999999999999999 No 17 >protein:vir:78703 Length: 905 # NCBI annotation: tail tube B # Family: family:all:825 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285450;genbank:gi:148724484;genbank:GeneID:5220174 Probab=100.00 E-value=4e-208 Score=1157.59 Aligned_cols=765 Identities=25% Similarity=0.400 Sum_probs=627.8 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||||.+|+||||++|+||+|||+.||+||||++||+.|.++ +..+.++|.|+||+.|+|++. T Consensus 1 M~~v~~si~nl~~GvSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRp~~~~i~~l~~~--~~~~~~~~~~~r~~~e~y~~~ 78 (905) T protein:vir:78 1 MGAVLQKIPNLLGGVSQQPDPVKLPGQVREAENVYLDPTFGCRKRPATKFVGELATN--LPSDTRWFPIFRDAGERYAVA 78 (905) T ss_pred CccceecchhhhCceeecchhhcCCcchhhhhccccccccccccCchhhhhhhhcCC--CCCCceEEEEEeCCCceEEEE Confidence 999999999999999999999999999999999999999999999999999999865 356789999999999999999 Q ss_pred EeCC-----eEEEEeC-CCcEEEEEcc---CccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEE Q lcl|Aclame:pro 81 FTGE-----DIKVFDL-DGKEYQVRGD---RSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDAL 151 (801) Q Consensus 81 ~~~~-----~irv~~~-~g~~~~v~~~---~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (801) +... .|||||+ +|.+++|+++ ..|+.+ ++.++|++++++|++||+|++++|++..... +++.++|+ T Consensus 79 ~~~~g~~~~~i~v~d~~~G~~~~V~~~~~~~~yl~~-~~~~~l~~~tv~d~tfi~N~~~~~~~~~~~~----~~~~~~~~ 153 (905) T protein:vir:78 79 LYKDGSGNTQVRVWDMQTGAERTVTPDATATAYLAT-TNLNNLNWLTVADYTLLSNKERIVTMSGASE----VDSNQRAL 153 (905) T ss_pred EeeCCCCCcceEEEEccCCcEEEEecCCCccceeec-CCCcceEEEEEcCEEEEEcCceeeeecCCCC----cCCCCeEE Confidence 9743 3999998 8999999865 367754 4688999999999999999999998754433 45677899 Q ss_pred EEeccCccceeEEEEeCCceEEEEEe---ecCCCccc------------------------------c------------ Q lcl|Aclame:pro 152 INVRGGQYGRRLSIEFNGAERAAVQL---PDGSQPAH------------------------------V------------ 186 (801) Q Consensus 152 ~~v~~g~y~~~y~v~i~~~~ta~~tt---p~~t~~~~------------------------------~------------ 186 (801) ++|++|+|+|+|+|+|++...+...| +.+..... . T Consensus 154 ~~v~~g~y~r~y~v~I~~~~~~~~~t~~~~~a~~~s~~s~~~~~~g~~~~~~~~~~~~~t~~~~~~l~f~~~~~~~~~~~ 233 (905) T protein:vir:78 154 VEINAISYNTTYSIDLDRDGASQQVKVYRAKALEISPGSFEVEDGGVCTEHDVQNYTNQTIGSSTGLAFQVRVQCAAYLE 233 (905) T ss_pred EEEEeeccceeEEEEEeCCCCceeeeeeccccceeccccccccccccccccceeeeecceeeccCCceeEEeeccccccC Confidence 99999999999999998754322211 11100000 0 Q ss_pred ---------e--------------------------------------------------------eeehhhHHHHHHHh Q lcl|Aclame:pro 187 ---------N--------------------------------------------------------EVDGQAIAEKLAAQ 201 (801) Q Consensus 187 ---------~--------------------------------------------------------~~~~~~ia~~l~~~ 201 (801) . ....+.++.+|.++ T Consensus 234 ~~~~~~~~~~~~~l~~g~~~~~~~~~~~v~~~g~~y~i~i~~~~~~~~~~~~~~~~~~t~~d~~a~~~~~~~i~~~l~~~ 313 (905) T protein:vir:78 234 NNEYRSRYNVSVVLQNGGTGFRKGDMITVNLNGRDYNIRVTQEEFVYTYASDGTAAHTTPQDSTAGTLDIGQITAGLVNS 313 (905) T ss_pred CCcccccccceeeeeccccccccCccEEEeeccceEEEEEecceeEEEecCCCcccccCccCccCccccHHHHHHHHHHh Confidence 0 00000111111111 Q ss_pred hhhcccceeeeeccccEEEEecCceEEEEeCCCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCC Q lcl|Aclame:pro 202 LRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTS 281 (801) Q Consensus 202 ~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~ 281 (801) + .....|.+...++.+++.+.++.. +.+++++|..++.+.++++.|+++++||++|++|++|+|.++.+ T Consensus 314 ~----------~~~~~~~~~~~g~~i~v~~~~~~~-~~~~~~~g~~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~~~ 382 (905) T protein:vir:78 314 V----------NLISNYSAQAVGNVIEIERTDGRD-FNLGVRGGATNRAMTAIKGTANSIVDLPGQCFDGFELKVINTEN 382 (905) T ss_pred h----------cccccEEEEecCcEEEEEecCCCc-cEEEEeccCCcceEEEEeccccccccCccccCCCcEEEEEeCCC Confidence 1 122457888899999999988754 67899999999999999999999999999999999999999999 Q ss_pred CCcceEEEEEEc------CCeEEEEEeccceeeeEeeccccEEEEeccCCeEEEeecc-------cCcccCCCccccCCc Q lcl|Aclame:pro 282 KTADQYYVRFDL------NRKVWVETIGWNTRTHLHYHTMPWALVRASDGNFDFKYLE-------WGARTVGDDTTNPYP 348 (801) Q Consensus 282 ~~~~~y~v~~~~------~~~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~-------w~~r~~gd~~~np~p 348 (801) ...|+|||+|+. ++++|+||++|+...+++.+||||.|++.++|+|+++..+ |.+|.+||+++||.| T Consensus 383 ~~~d~yyv~~~~~~~~~~~~~~W~E~~~~~~~~~~~~~tmp~~l~r~~~g~f~~~~~~~~~~~~~~~~r~~Gd~~Tnp~p 462 (905) T protein:vir:78 383 AESDDYYVVFRSAAEGIPGSGSWEETVAPGIERGFNTSTMPHALIRQADGNFTLEALNDEGTITGWAQREVGDDDTNPKP 462 (905) T ss_pred CCcceEEEEEEecccCCcCceeEEEecccccccccccccccEEEEEecCceEEEEEeccccccccccccccCCcccCCCC Confidence 999999999964 4569999999999999999999999999999999999887 999999999999999 Q ss_pred hhcCCCceEEEEEcCceEEecCCEEEEEecCCccccccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcE Q lcl|Aclame:pro 349 SFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQ 428 (801) Q Consensus 349 sf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q 428 (801) ||+|++|++|+||||||+|++|++|||||+||||||+++|++++.|||||+++++++++++|+|+++++++|+|||+++| T Consensus 463 sf~g~~is~v~f~q~RL~f~s~~~v~~Srtgd~~nF~~~t~~~~~DdDpI~~~~ss~~~~~i~~~v~~~~~L~ifT~g~e 542 (905) T protein:vir:78 463 SFVGRGISDMFFYNNRLGFLSEDAVIMSQPGDYFNFFVTSAITISDSDPIDVTASSTKPAILRAAIGAPKGLILFAENSQ 542 (905) T ss_pred cccCCCcceEEEEcceEEEecCCeEEEEccCCccccccccccCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCce Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCc-cccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCCCe Q lcl|Aclame:pro 429 FVLTASD-ILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGV 507 (801) Q Consensus 429 ~~~~~~~-~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g~v 507 (801) |+|++++ +|||+|++++++|+|+|++.|+|+.+|++++|++++|+|++|+||.+ ++.+|+|++.|+|+|++|||+|++ T Consensus 543 f~lsg~~~~lTP~s~~i~~~S~~~~~~~v~Pv~vG~~vlFv~~~g~~s~vre~~y-~~~~d~y~a~DlT~~a~hl~~g~v 621 (905) T protein:vir:78 543 FLLASQEVVFSTATIKLTEISDYFYRSLAKPVSTGVSIAFVSEADTYSKIFEMSI-DSVDNRPQVADITRIVPEYVPTGL 621 (905) T ss_pred EEEecCCccccceeEEEEeEEeecccCCCCcEEeCCeEEEeecCCCeeEEEEEEe-eecccceehhHHHHHHHHhcCCce Confidence 9999865 79999999999999999999999999999999999999999999865 456789999999999999999998 Q ss_pred EEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceEEEEEEEcCCEEEEEEEeCCCEEEEEEEEee Q lcl|Aclame:pro 508 FSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMSNEHAVWMGRLHFTK 587 (801) Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~ 587 (801) .+++ ++.|+.++|+. +++++||+|+||++++||+|+|||||+|+|.++++|+. .|.+|++++|..++...++.+.+ T Consensus 622 ~~~~-~s~~~~~v~~~-~~~~~l~~ytyl~~~~eq~v~AWsrw~~~G~~~~~a~i--~d~~~~vV~r~~~G~~~~~~~~l 697 (905) T protein:vir:78 622 TWSV-STPNNSMMLFG-DNSNTAYIFKFFNQGNERQVAGWSKWILPGEQRMCGFF--ADTGYFVLYDSTTGSYVLSAMEL 697 (905) T ss_pred EEEE-ecCCCcEEEEE-cCCCeEEEEEeecCCCceeEEeEEEEecCCCeEEEEEE--cCCEEEEEEEccCCeEEEEEEee Confidence 7665 45666666654 67899999999999999999999999999999987764 46788888887666555554443 Q ss_pred c------cCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCceEEEEecCCceeeccccccccccCc Q lcl|Aclame:pro 588 D------SIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDP 661 (801) Q Consensus 588 ~------~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~ 661 (801) . ..+.....+.+++|++...+ ..++.... .........+++.|++++.+...+||.+....... .+.++ T Consensus 698 ~~~~~~~~~d~~~~~~~~~~d~~~~~~--~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~~--~~~~~ 772 (905) T protein:vir:78 698 LDDPDSASIDTAFSSFLPRLDNYVVKS--DLTVVDNG-DGTLTVDLEAGQAMTGATPVIMFTDGPSEFAFSQP--TITAG 772 (905) T ss_pred ccccCccccccceeeeeeccceeeecc--cceecccC-cceEeeeccCccccccceeEEEeeCCceeeeEEEE--Eeece Confidence 1 12222222333444332111 11221111 11222334467889999999889998765322122 12334 Q ss_pred EEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEeecceeEEEEeCCCCcceeeeeccc Q lcl|Aclame:pro 662 MLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIYTMAGA 741 (801) Q Consensus 662 ~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~ 741 (801) .++++ .+++|+|||+|+++++++||+++.+++ ....+|+||+|+.|+|.+||+|.+++++.+++........ T Consensus 773 ~~t~~---~a~~v~VGl~Y~s~v~~~p~~~~~~~~-----s~~~~~~rI~rv~lr~~~Sg~~~v~v~~~~~~~~~~~~~~ 844 (905) T protein:vir:78 773 QFTVD---TTDDFVVGFKYETKITLPGFFTSEENK-----ADRVYAPIVEFLYLDLYYSGRYQIEVDRIGYDTINIDAGS 844 (905) T ss_pred eeccc---cCCeEEEeeeeeEEEeecceEeccCCC-----cccccceEEEEEEEEeecceeEEEEEcCCCcceecccccc Confidence 44442 567899999999999999998875544 4567888999999999999999999999888765444455 Q ss_pred eeccccccCCccccccceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEecc-ccCC Q lcl|Aclame:pro 742 RLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRR-SSGI 801 (801) Q Consensus 742 ~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r-~rrv 801 (801) +.....+..+.|++.+|.++||+.+|+++.+|+|+|+.|+||+|+||+|||+||+| ++|| T Consensus 845 ~~~~~~~~~~~p~~~tg~~~vP~~g~~~~~~v~I~sd~PlP~tvlsi~weg~Yn~r~~~~~ 905 (905) T protein:vir:78 845 IDANIYLADGAPLKEIATENVPLFTPGDQVTVTIKAPDPFPSAITGYSWQGHYNRRGIAFI 905 (905) T ss_pred eecCcccCcccccccccEEEEEeeccCceeEEEEEECCCCcEEEEEEEEEEEeccceeecC Confidence 55555666777788999999999999999999999999999999999999999999 7788 No 18 >protein:vir:103790 Length: 768 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024932;genbank:gi:48697202;genbank:GeneID:2846114 Probab=100.00 E-value=3.6e-171 Score=955.03 Aligned_cols=727 Identities=13% Similarity=0.087 Sum_probs=533.4 Q ss_pred Cceeeeechhhhcc-----cccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~ 75 (801) ||+++++++||.+| +++|+|++||++||++|+||+++|+|||+||||++||++++++ +...+|+||.|+++| T Consensus 1 M~~~~~~~~~F~~GelsP~l~~r~Dl~ry~~~~~~~~N~~~~~~gGl~rRpGt~fv~~~~~~---~~~~~lipf~~~~~~ 77 (768) T protein:vir:10 1 MPKAAPQQVSFDAGELSPLLGARVDLAKYPNGCQVMENFIATVQGPAIRRGGKRFVAATKDS---TKQSWLLPFIVADGI 77 (768) T ss_pred CCcceeeeeeccCceechhhcccchHHHHHHHHhhhhcceeeecCCceecCchhhhhhhcCC---CCCeeEEEEEecCcc Confidence 99999999999999 8999999999999999999999999999999999999998754 357899999999999 Q ss_pred eEEEEEeCCeEEEEeCCCcEEE----EEccC----ccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCC Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQ----VRGDR----SYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQ 147 (801) Q Consensus 76 ~y~l~~~~~~irv~~~~g~~~~----v~~~~----~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~ 147 (801) +|+|||++++||||+.+|.++. .+..+ .++.+.+++.+|+++|+||+|||+|+++||+++.|.++..| T Consensus 78 ~y~l~fg~~~irv~~~~g~v~~~~~~~e~~tp~~~~~l~~~~~~~~L~~~q~aD~~~i~~~~~~p~~l~r~~~~~w---- 153 (768) T protein:vir:10 78 AYMLEFGDHYIRFFVNRGQLVNAGAPVEIATPYALADLTTEDGTFAIRATQSADTMYLFHGGYPTQKLLRTSATTF---- 153 (768) T ss_pred EEEEEEcCCEEEEEECCcEEEecCeeEEEEcCCCcceeecccccceeEEEeecCEEEEEcCCcceeEEEEecCCCc---- Confidence 9999999999999998876542 12222 33555667789999999999999999999999999876554 Q ss_pred ccEEEEeccCccce-----eEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEe Q lcl|Aclame:pro 148 GDALINVRGGQYGR-----RLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNV 222 (801) Q Consensus 148 ~~~~~~v~~g~y~~-----~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~ 222 (801) ..+.+.++.++|.. ++++...+...+...+++. +.+..+++...+.. .........+|.... T Consensus 154 ~l~~~~~~~gp~~~~n~~~~vti~~s~~~~~~T~tasa------~~~~~~~v~~~~~l-------~~~~~~~~~~~~~~~ 220 (768) T protein:vir:10 154 SLQPVTFVGGPFAAVNSDNNVRVHASAGTGAVTLVASA------SVFRPSDVGTLFYL-------EQEDNSFVKPWVVHQ 220 (768) T ss_pred eeEEeeecCccccccccceeEEEEecccceeEEEeecC------Cccchhhcceeeee-------eeeccccccccEEEE Confidence 22334456666543 2333333322111111111 11111222111110 011112234455444 Q ss_pred cCceEEEEeCCCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcc-----eEEEEEEcCCeE Q lcl|Aclame:pro 223 GPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTAD-----QYYVRFDLNRKV 297 (801) Q Consensus 223 ~~~~~~i~~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~-----~y~v~~~~~~~~ 297 (801) ..+...+.+.++.......+.++..+ ....+++.+..|+.+.+.+......+ ..++++...... T Consensus 221 ~~g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (768) T protein:vir:10 221 KIGPSELRRVGDRVYLCTAVGTATPQ-----------VTGTETPTHTSGSRWDGTGQDESATDEYGSIGAEWEYQHSGYG 289 (768) T ss_pred eeeeEEEEecCCceEEeeeecccccc-----------ccceeccccccCceEEEecCcccccccccccceEEEEEEcCCc Confidence 44444444444433332222221110 01122344445655444443332211 123333322222 Q ss_pred EEEEeccceeeeEeeccccEEEEeccCCeEEEeecccCcccCCC-ccccCCchhcCCCceEEEEEcCceEEecCCEEEEE Q lcl|Aclame:pro 298 WVETIGWNTRTHLHYHTMPWALVRASDGNFDFKYLEWGARTVGD-DTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILS 376 (801) Q Consensus 298 W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd-~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v~~S 376 (801) |. ...++...+|++..++...+++.+...++.....+. ++....++-.++||++|+||||||+|+||++|||| T Consensus 290 ~~------~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g~Ps~v~f~q~RL~f~~~~~v~~S 363 (768) T protein:vir:10 290 TV------LITGYTNDQVVTGTVATNDPADPGMLPNTVVTLTGTYKWARSLFNSTDGFPQMGTFWRNRLCLMRDRWLAMS 363 (768) T ss_pred eE------EEEEecCCeeEEeeeeeecCcccccccccccccCCCcccccCCCcCCCCCceEEEEEeeeEEEeeCCEEEEE Confidence 22 223344556677766665555554444433333221 22223333345677889999999999999999999 Q ss_pred ecCCccccccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCC---ccccccceEEEEEeeeccc Q lcl|Aclame:pro 377 RTSKYFNFFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTAS---DILSSRSVGLNLTTQFDVQ 453 (801) Q Consensus 377 ~~gd~~nF~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~---~~lTP~~~~i~~~s~~~~~ 453 (801) |+||||||++++++++.|||||+++++++++++|+|++++ ++|+|||+++||+|+++ ++|||+|++++++|.|+++ T Consensus 364 rtgd~~nF~~~s~~~~~DdD~I~~~~ss~~~~~i~~~v~~-~~L~i~T~~~q~~l~~~~~~~~lTP~~~~i~~~s~~g~~ 442 (768) T protein:vir:10 364 VSADFETFKTKDADQQTDDSAIVQQLNARQLNKLAWMVES-DSLLIGMTGDEWVIGPANASQPVSAANLNAARRTSYGSK 442 (768) T ss_pred cccccccccccccccccCCccEEEEecCCcceeEEEEeec-CcEEEEecCceEEEecCCCCcccccceEEEEEeehhccc Confidence 9999999999999999999999999999999999999999 58999999999999873 5899999999999999775 Q ss_pred CCCCcEEeCCeEEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCCC------eEEEEEcCCCCeEEEEEEcCC Q lcl|Aclame:pro 454 DRARPHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNG------VFSISGTTAENFVAILTSGAP 527 (801) Q Consensus 454 ~~v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g~------v~~~~~~~~~~~~~~~~~~~~ 527 (801) +++|+.+|++++|+|++|+ ++|||.+ ++.+|+|+++|+|+|++||+++. +..++++++|+.++|++. +| T Consensus 443 -~~~Pv~vG~~v~fv~~~g~--~vre~~y-~~~~d~y~a~DlT~~a~hl~~~~~~~~~~i~~~a~~~~p~~v~~~v~-~d 517 (768) T protein:vir:10 443 -RIQPVQVGGTIMFVQKAGR--KLRDFKY-DFSSDNYVSTDVTKIADHITRGRAGTNSGIMSLCFQQEPHSVVWAAR-AD 517 (768) T ss_pred -ccccEEeCCeEEEEcCCCC--EEEEEEe-eeecCceecchhhhhhhhhccccCccccceeeEEEeecCCeEEEEEe-cC Confidence 7999999999999999996 5888865 46689999999999999999863 788999999999887765 56 Q ss_pred CEEEEEEeeeCCCceEEEEEEeeec-CCceEEEEEEE----cCCEEEEEEEeCCCEEEEEEEEeecc--CCCCcccceee Q lcl|Aclame:pro 528 NRVYIYKFLYIDEEIRQQSWSHWDF-GDNVTVFAAQV----INSTMTVLMSNEHAVWMGRLHFTKDS--IDLPGEPYRLY 600 (801) Q Consensus 528 ~~l~~~ty~~~~~e~~~~aW~~w~~-~g~~~~~~~~~----~~d~ly~vv~r~~~~~~~~~~~~~~~--~~~~~~~~~~~ 600 (801) |+|++|+|++++++|+|+|||||++ +|.++++|+.. .+|.||++|+|.++++.+||.|.++. .......+++| T Consensus 518 g~l~~~ty~~e~~~q~v~aW~~~~~~~g~v~~v~~i~~~~g~~d~l~~~v~r~~~g~~~~~ie~l~~~~~~~~~~~~~~~ 597 (768) T protein:vir:10 518 GQLIGCTYDEEAGRSDVYGWHRHPDANGFVECVASMPAPDGASDDLWVIVRRQVNGQTVRYVEYLNPALQDDEPQSSAFY 597 (768) T ss_pred CeEEEEEEecCCCceeEEeEEEEEcCCCEEEEEEEEecCCCCccEEEEEEEecCCCeEEEEEEecCcccccccccccceE Confidence 9999999999888899999999986 68888888743 47999999999999999999887775 22334467899 Q ss_pred eeeeEEEecccccccccccceeeccccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEee Q lcl|Aclame:pro 601 IDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNI 680 (801) Q Consensus 601 lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y 680 (801) |||+..+.... ...++|+.|++|+++.+++||.+++. ..+.+++++++ +++++|+|||+| T Consensus 598 ~D~~~~~~~~~-------------~~~~~gl~~leg~~v~v~~dG~~~~~-----~~v~~g~itl~--~~~~~v~vG~~y 657 (768) T protein:vir:10 598 VDAGITYNGVP-------------TSTIAGLGHLEGVTVAVLTDGAVHPS-----RTVTAGAITLD--WSASIVHIGVPT 657 (768) T ss_pred eccccccCCcc-------------eeeecCCCCcccceEEEEECCEeccC-----ceecCCEEEeC--CCCceEEEeEee Confidence 99987553211 13578999999999999999998763 34455677774 789999999999 Q ss_pred eEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEeecceeEEEEeCCCCcceeeeeccceeccccccCCccccccceE Q lcl|Aclame:pro 681 PFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQY 760 (801) Q Consensus 681 ~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~ 760 (801) +++++++||+++.++|. ...+|+||+|+.|+|.+|+++.++++...++. ...+.+.+.. .+...+|++||++ T Consensus 658 ~s~~~~~p~~~~~~~gs-----~~~~~~ri~r~~v~~~~S~~~~~~~~~~~~~~--~~~~~r~~~~-~~~~~~~l~TG~~ 729 (768) T protein:vir:10 658 TCRIQTMQLNAGAANGT-----AQGKTKRVTNIATRFSRSLGGVVGPTFDDNDL--EQLSFRKPSN-AMDRAVPLFDGDM 729 (768) T ss_pred eEEEEecceEeecCCcc-----ccccceEEEEEEEEEecccceEEEecCCCCCc--eeeeeEecCc-ccCccCCcccCEE Confidence 99999999999866553 35588999999999999999999875544321 1111122221 2233467899999 Q ss_pred EEEEee-ecceeEEEEEECCCCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 761 RFPVVG-NAQTNTVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) Q Consensus 761 ~vp~~~-~~~~~~v~I~~~~P~P~tvlai~weg~y~~r~ 798 (801) ++|+.+ |+++.+|+|+|++|+||+|++|+||+++|+|+ T Consensus 730 ~v~~~~~~~~~~~i~i~~d~P~P~tvlsi~~~~~~nd~~ 768 (768) T protein:vir:10 730 ESDWRGGYEGQSWICYQNDQPLPVTLLGFFPILDTQDDR 768 (768) T ss_pred EEEecCCCCcceEEEEEECCCCCEEEEEEEEEEEEeecC Confidence 999854 68999999999999999999999999999998 No 19 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=100.00 E-value=4.2e-161 Score=899.83 Aligned_cols=719 Identities=12% Similarity=0.089 Sum_probs=526.1 Q ss_pred Cceeeeechhhhcc-----cccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~ 75 (801) |+ ++++++||.+| +++|+|++||++||++|+||+++|+||++||||++||++++++ ..+.||+||.|++.| T Consensus 1 m~-i~~~q~sF~~GElsP~l~gR~Dl~ry~~q~~~~~N~~~~~~GGl~rRpGt~fva~~~~~---~g~~rLipf~~s~~q 76 (823) T protein:vir:95 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP---NRKCRLIPFQFSTVQ 76 (823) T ss_pred Cc-ceeechhccCceechheeccchHHHHHHHHhhhhCcEeeecCCceecCchhhhhhhcCC---CCCeeEEEEEeCCCc Confidence 99 99999999999 9999999999999999999999999999999999999998765 367899999999999 Q ss_pred eEEEEEeCCeEEEEeCCCcEEE-----EEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccE Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQ-----VRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDA 150 (801) Q Consensus 76 ~y~l~~~~~~irv~~~~g~~~~-----v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (801) +|+|+|++++||||+.+|.+.. .+..+|| ++.++.+|+|+|+||+|||+|+++||+++.|.++..|. . . T Consensus 77 ~y~Lefg~~~irV~~~~g~vv~~~~~~~ev~tPy--~~~~l~~Lr~~qsaD~~fivh~~~~p~~L~r~~~~~w~---l-~ 150 (823) T protein:vir:95 77 TYALEFGHQYMRVIKDGALVLNSSNVIYEIATPY--TEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQ---L-V 150 (823) T ss_pred EEEEEEcCCeEEEEeCCcEEEecCCceeEEeccc--ccccccceeEEEeccEEEEEcCCccceEEEecCCCCce---E-E Confidence 9999999999999986664321 1223343 34467899999999999999999999999998775441 2 2 Q ss_pred EEEeccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEE Q lcl|Aclame:pro 151 LINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHIL 230 (801) Q Consensus 151 ~~~v~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~ 230 (801) .+.+..++|... ..+ .+ ...+++++.+..+...+.+....+. .+....... .....+... ...... T Consensus 151 ~~~~~~gp~~~~---~~~--~t-~~v~~~~~~~~~t~ta~~~~~~~d~----vg~~~~l~~---~~~~~~~~~-~~~~~~ 216 (823) T protein:vir:95 151 DVVTKNGPFEDI---NID--ES-LTVYASASTGTITLTASASIFGAEQ----VGKLFYLEQ---PAVDSVPVW-ETSKST 216 (823) T ss_pred EEEEeccccccc---ccc--ce-eEEeccccCceeEEeecccccchhh----ccceEEEec---cccceeeec-ceeeee Confidence 234456666531 111 11 1122333333322222222211111 111000000 000000000 000000 Q ss_pred eCCCcceeEEEEecCCCcceeeeeeeecccccccccc-ccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccc-eee Q lcl|Aclame:pro 231 APNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPIN-APDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWN-TRT 308 (801) Q Consensus 231 ~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~-~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~-~~~ 308 (801) ..+ . ..... .+++.. . .......+++. .+..+.+...+......-.+|..++.+.|.|++++..+ ... T Consensus 217 ~~~-----~-~~~~~-~~~~~~-~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~v~~~~~~ 286 (823) T protein:vir:95 217 SIG-----D-IRRAD-SNYYRA-V--TAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTAT 286 (823) T ss_pred ccc-----c-eEEec-ccceee-e--eccccceeecccCCcceEEeceecccccceeEEEEEeCCcceEEEEeecceeee Confidence 000 0 00000 011000 0 01111122222 23333444433333222233333456778899886544 334 Q ss_pred eEeeccccEEEEeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEec----CCEEEEEecCCcccc Q lcl|Aclame:pro 309 HLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS----GENIILSRTSKYFNF 384 (801) Q Consensus 309 ~~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~----~~~v~~S~~gd~~nF 384 (801) ....++||+.+++.++++|+|+...|.+ .++||++|+||||||+|++ |++|||||+|||||| T Consensus 287 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~--------------~~g~Ps~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF 352 (823) T protein:vir:95 287 AEVISYIPSQVVGEDNASYKWAKYAWNS--------------VNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDF 352 (823) T ss_pred ceEeeeeccccccCCcCCccccccccCc--------------CCCCccEEEEEeceEEEEEcCCCCcEEEEeccCCcccc Confidence 4556789999999999999998888864 5689999999999999995 799999999999999 Q ss_pred ccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeecccCCCCcEEeC Q lcl|Aclame:pro 385 FPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTAS--DILSSRSVGLNLTTQFDVQDRARPHGVG 462 (801) Q Consensus 385 ~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~v~Pv~vg 462 (801) ++++++ +|||||++++++++++.|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|.|++ ++|+|+.+| T Consensus 353 ~~~~~~--~DdD~I~~~~s~~~~~~i~~~v~~~-~Lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~vg 428 (823) T protein:vir:95 353 GKSNPT--QDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGS-SNVPPIAVA 428 (823) T ss_pred ccccCC--CCCCcEEEEEcCCcceEEEEEeecC-cEEEEecCcEEEEEcCCCcccceeeEEEEEeecccc-ccccceEeC Confidence 999875 6999999999999999999999995 7999999999999875 589999999999999965 579999999 Q ss_pred CeEEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCC-CeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCc Q lcl|Aclame:pro 463 RNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-GVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEE 541 (801) Q Consensus 463 ~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g-~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e 541 (801) +.++|+|++|+ ++|||.+. +.+|+|.+.|+|+|++||+++ ++.+++++++|++++|++. +||+|++|+|+ +| T Consensus 429 ~~~~Fv~~~g~--~vre~~~~-~~~d~~~~~dlT~~a~hl~~~~~i~~~a~~~~p~~~~~~v~-~dG~l~~~ty~---~~ 501 (823) T protein:vir:95 429 NIALFVQEKGS--VVRDLAYS-FDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIR-DDGKLLVMTYL---RD 501 (823) T ss_pred CeEEEEecCCC--EEEEEEEe-eecCceecchhhhhhhhhcCCCceEEEEEecCCCeEEEEEe-cCCcEEEEEEe---cc Confidence 99999999985 68998655 567999999999999999987 6889999999999988764 56999999997 68 Q ss_pred eEEEEEEeeecCCceEEEEEE--EcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEeccccc------ Q lcl|Aclame:pro 542 IRQQSWSHWDFGDNVTVFAAQ--VINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGT------ 613 (801) Q Consensus 542 ~~~~aW~~w~~~g~~~~~~~~--~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~------ 613 (801) |++.|||||+++|+++++|+. ..+|+||++|+|+++++..+|.|.+++.......+.+||||+..|.+...+ T Consensus 502 q~v~aW~~~~~~g~~~~~~~i~~~~~d~l~~~v~R~i~g~~~~yiE~~~~~~~~~~~~~~~lD~~~s~~g~~~~~~~~~l 581 (823) T protein:vir:95 502 QQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTI 581 (823) T ss_pred cceeeeEEEecCCcEEEEEEecCCCCCEEEEEEEeccCCeEEEEEEeeccccCCCccceeEEEEEEEeecCcccceeeEe Confidence 889999999999999999875 457999999999999999999998888777777889999999876531110 Q ss_pred ---------------------ccccc---cce------------------------------------------------ Q lcl|Aclame:pro 614 ---------------------YNDDT---YQT------------------------------------------------ 621 (801) Q Consensus 614 ---------------------~~~~~---~~t------------------------------------------------ 621 (801) ..... ... T Consensus 582 ~~g~~~l~~l~g~~v~~adg~~~~~~~v~g~i~l~~~~~~~~vGl~~~~~i~~~~~~v~~~~a~~~~~~r~v~a~l~~~~ 661 (823) T protein:vir:95 582 TGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVA 661 (823) T ss_pred cCCCCcccccCceEEEecCcceECCccceeEEEeCcCCCccccccceEEEEEEeeceeeCCceEEEccCCcccceeeeee Confidence 00000 000 Q ss_pred ----eeccccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCC Q lcl|Aclame:pro 622 ----SISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAED 697 (801) Q Consensus 622 ----~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~ 697 (801) ...-..++||+||||++|.+++||++++.. .+.+++++|+ .+++.|+|||+|+++++++||++..+ |. T Consensus 662 t~~~~~~~~~~~gL~hleg~tv~v~~dg~~~~~~-----~v~~G~vtl~--~~~~~v~vGl~~~~~~~~l~~~~~~~-g~ 733 (823) T protein:vir:95 662 TTNWQMARRTFGGLSHLEGQTVNILSDANVEPQK-----VVSGGAVTLE--SPGAVVHIGLPITAEFETLDININGQ-ET 733 (823) T ss_pred ccccccccceeeeccccccceEEEEEcCeeeCCe-----EecCCEEEec--CCCCEEEEeecceeeEEecchhcCCC-cc Confidence 001125679999999999999999999754 4556788886 67899999999999999999998643 32 Q ss_pred CccceEEeeeEEEEEEEEEeecceeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEE-eeecceeEEEEE Q lcl|Aclame:pro 698 GSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPV-VGNAQTNTVTIE 776 (801) Q Consensus 698 ~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~-~~~~~~~~v~I~ 776 (801) -...++||+++.++|.+|.++.+......-++... +. .......+|++||++++++ .+|+++++|+|+ T Consensus 734 -----~~g~~~ri~~~~~~~~~s~~~~~g~~~~~l~~~~~---r~---~~~~~~~~~~~tG~~~~~~~~~~~~~~~~~i~ 802 (823) T protein:vir:95 734 -----LLDKKQVIPSVTLVVNASRGIWATTPGGKWYEYPQ---RE---FEFYDDPVDDATGKVEVKLDSNWGKNGRVKIR 802 (823) T ss_pred -----cCCceeEEeEEEEEEEeeeeEEEecCCCceeEeec---cC---CCcccCCCCcccceEEEecCCCcCCccEEEEE Confidence 23455689999999999999998753332222221 11 1234556789999999997 789999999999 Q ss_pred ECCCCCEEEEEEEEEEEEecc Q lcl|Aclame:pro 777 SDASTPLNIIGCGWEGNYLRR 797 (801) Q Consensus 777 ~~~P~P~tvlai~weg~y~~r 797 (801) |++|||||||||..|-..+-= T Consensus 803 q~~plp~tvl~v~~~~~~~g~ 823 (823) T protein:vir:95 803 QLDPLPLSVLAVIPRLTVGGF 823 (823) T ss_pred EcCCCceEEEEEEEEEEecCC Confidence 999999999999987664433 No 20 >protein:vir:1778 Length: 680 # NCBI annotation: tail protein A # Family: family:all:825 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570344;genbank:gi:18640503;genbank:GeneID:932716 Probab=100.00 E-value=1.6e-163 Score=913.12 Aligned_cols=538 Identities=27% Similarity=0.463 Sum_probs=471.4 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||||.+|+||||++|+||+|||+.||+||||++||+.|.+. ..+.++|.++|+++|+|++. T Consensus 1 M~~v~~si~nl~~GvSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRpg~~~i~~l~~~---~~~~~~~~~~rd~~e~~~~~ 77 (680) T protein:vir:17 1 MAAVEQMVPNLLGGISQQPDPLKLPGQVKQARNVQLDPTFGALKRPGTELIMQVTGI---PKRAKWIPIMRDAREHYYVA 77 (680) T ss_pred CccceecchhhhCcceecchhhcCcchhhhhhccccCcCcccccCccceeeeeccCC---CCCceeEEEecCCCCeEEEE Confidence 999999999999999999999999999999999999999999999999999998653 45788999999999999999 Q ss_pred EeCCe--------EEEEeC-CCcEEEEEccCcccc-----ccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCC Q lcl|Aclame:pro 81 FTGED--------IKVFDL-DGKEYQVRGDRSYVR-----TANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKD 146 (801) Q Consensus 81 ~~~~~--------irv~~~-~g~~~~v~~~~~y~~-----~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~ 146 (801) +.... |||||+ +|.+++|++...++. ++++..+|++++++|++||+|+++.|++... +..+ T Consensus 78 ~~~~g~~~~~~~~i~v~d~~~G~~~~v~~~~~~~~~~~~~~~~~~~~lr~~tv~d~tfi~N~~v~~~~~~~-----~~~~ 152 (680) T protein:vir:17 78 IYREGANESGDLRIRVFDLKAGVERAVSFVGGEVEEYFPGDETDWEAIRSLTIGDYTFLSNPNVQPTTWSR-----SFSR 152 (680) T ss_pred EEcCCCcccccceeEEEEccCCeEEEEEcCCCceEEEeecCCCCccceEEEEEcCEEEEECCeEEEeccCC-----CCCC Confidence 98654 999997 699999998877653 3445679999999999999999999987653 2346 Q ss_pred CccEEEEeccCccceeEEEEeCCceEEEE-----EeecCC----------Cccc----c--------------------- Q lcl|Aclame:pro 147 QGDALINVRGGQYGRRLSIEFNGAERAAV-----QLPDGS----------QPAH----V--------------------- 186 (801) Q Consensus 147 ~~~~~~~v~~g~y~~~y~v~i~~~~ta~~-----ttp~~t----------~~~~----~--------------------- 186 (801) .+.++++|++++|+++|.|++++...... +...++ .+.. . T Consensus 153 ~~~g~~~v~~~ayg~ty~v~ing~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ag~~t~~~~~~a~la~~l~~~~~~~~~ 232 (680) T protein:vir:17 153 RPEGLVTIGAAGYGTSYIVDFATEDSGQQRRWAVQEMQAPKTKRKKGDGSPDEAGETTVNNWNGTGLSFRVKVEARAFLV 232 (680) T ss_pred CCeeEEEEEEeeeeeEEEEEEeccccceeeeeeeeeeeccccccccccccCCCCcceeeeeeeeeeeeeeeeeccceeee Confidence 77899999999999999999977432110 000000 0000 0 Q ss_pred --------------------------------------------------------------------eeeehhhHHHHH Q lcl|Aclame:pro 187 --------------------------------------------------------------------NEVDGQAIAEKL 198 (801) Q Consensus 187 --------------------------------------------------------------------~~~~~~~ia~~l 198 (801) ..+++++|+.+| T Consensus 233 ~~g~~~~~~y~~~~~l~~tg~~~~~~~~t~~v~~~G~~y~IsI~~~~~~~~~~~~~s~~~~t~~~~~a~~at~~~Ia~~L 312 (680) T protein:vir:17 233 DDGEEYGHNYIPYVTLLTPGNNTSPFPDTIRVDVSGEGWDIKVTKQIQSKVYANLGTAQFTTPVDQSGGGASTSDIVTGL 312 (680) T ss_pred cCCCceEEEEeeEEEEecCCccccccCceEEEecccceeEEEEccceeeEeccCccceeeeeccCCcccceeHHHHHHHH Confidence 001111222222 Q ss_pred HHhhhhcccceeeeeccccEEEEecCceEEEEeC--CCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEE Q lcl|Aclame:pro 199 AAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAP--NNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKI 276 (801) Q Consensus 199 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i 276 (801) ..++. ....+.+.+.++.+++... .+...+.++++|+..++++.++.++|+++++||++||+||+|+| T Consensus 313 ~~~i~----------~~~~~~~~~~g~~i~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~Lp~~a~~g~~v~v 382 (680) T protein:vir:17 313 SAAIN----------GLGTFTAESIGNVIRVRYSDPTRTDEFTMSARGGTSGTGLESIKYSVDTLAELPTKCWNDYQVAV 382 (680) T ss_pred HHhhc----------ccCcEEEEECCCEEEEEeccCCCceEEEeeccCCCCceeeeeeeeeeccccccccccCCCcEEEE Confidence 22211 1235777888888888654 45567899999999999999999999999999999999999999 Q ss_pred eecCCCCcceEEEEEEc--------CCeEEEEEeccceeeeEeeccccEEEEeccCCeEEEeecc-------cCcccCCC Q lcl|Aclame:pro 277 VGDTSKTADQYYVRFDL--------NRKVWVETIGWNTRTHLHYHTMPWALVRASDGNFDFKYLE-------WGARTVGD 341 (801) Q Consensus 277 ~~~~~~~~~~y~v~~~~--------~~~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~-------w~~r~~gd 341 (801) .++.++..++|||+|+. ..++|+||++|+...+++.+||||.|++.++|.|.++..+ |++|.+|| T Consensus 383 ~~~~~~~~~~Yyv~~~~~~~~~~~~~~~~W~E~~~~~~~~~~~~~tmp~~l~r~~~g~f~~~~~~~~~~~~~~~~r~~Gd 462 (680) T protein:vir:17 383 RNTQDTEVDDYYVKFETDVEDADVPGSGYWVETVKNGDDGGLVDDTMPHVLVRNALGDFTFSSLNNSSYGKTWADRSVGS 462 (680) T ss_pred EeCCCCcccceEEEEeccCcccCcccccceeecccCcccceeccCcceEEEEEccCceeEEEeeccccccccccccccCC Confidence 99999999999999986 4568999999999999999999999999999999999876 99999999 Q ss_pred ccccCCchhc--CCCceEEEEEcCceEEecCCEEEEEecCCccccccccccccCCCccEEEEEcCCcceeeeeeeecCCc Q lcl|Aclame:pro 342 DTTNPYPSFT--GQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEE 419 (801) Q Consensus 342 ~~~np~psf~--g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~ 419 (801) |++||.|||+ |+||++|+||||||+|++|++|||||+||||||++++++++.|||||++++++++++.|+|+++++++ T Consensus 463 d~tnp~psF~~~G~~p~~v~f~q~RL~f~s~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~ 542 (680) T protein:vir:17 463 EDTNPHPTFTESGNGIYGMFMYKNRLGFLTQDAVIMSQVGDYFNFYATSGVTISDADPIDMATSDTKPVKLEAAISSTSG 542 (680) T ss_pred cccCCCcccccCCCCceEEEEEcceEEEeeCCeEEEEccCCcccccccccccCCCCccEEEEEcCCcceeeeEEeecCCc Confidence 9999999999 88999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCcEEEEeCC-ccccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeecccceehhhHHHH Q lcl|Aclame:pro 420 LLLWSDQAQFVLTAS-DILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAH 498 (801) Q Consensus 420 L~l~t~~~q~~~~~~-~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~ 498 (801) |+|||+++||+|+++ ++|||+|++++++|+|+|++.|+|+.+|+.++|++++|++++|||| .+++.+|+|++.|||+| T Consensus 543 L~l~t~g~q~~ls~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~s~vre~-~y~~~~d~y~a~DlT~~ 621 (680) T protein:vir:17 543 AILFGNQAQFRLSSPDESFGPKTATLDKISNYTYESKADPVQTGVSMIFPTNMGTYSSVYEL-STESAKGTPVIEDSSRV 621 (680) T ss_pred EEEEecCeEEEEecCCceecceeEEEEEEEeecccCCCCceEeCCeEEEeecCCCcceEEEE-eeeeccCceehhhHHHH Confidence 999999999999985 5999999999999999999999999999999999999999999998 56778899999999999 Q ss_pred HHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceE Q lcl|Aclame:pro 499 VPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVT 557 (801) Q Consensus 499 ~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~ 557 (801) ++|||+|++.+++++++++.+++|+++++|+|++|+|||+++||+|+|||||+|++.-. T Consensus 622 a~hl~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~~yl~~~~e~~v~aW~rw~~~~~d~ 680 (680) T protein:vir:17 622 IPRLIPSGLTWSTASMNNDTVFFGNAKKGRNVYVFRFFNEGQERKVAGWTTWYYEDQDH 680 (680) T ss_pred HHHhcCCceEEEEeeCCCCeEEEEEEcCCCEEEEEEEeeCCCceEEEEEEEEecCCCCC Confidence 99999999999999999999999999999999999999999999999999999987432 No 21 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=100.00 E-value=2.3e-156 Score=873.88 Aligned_cols=714 Identities=12% Similarity=0.089 Sum_probs=512.6 Q ss_pred Cceeeeechhhhcc-----cccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~ 75 (801) |+. +..++||.+| +.+|.|++||++||++|+||+++|+||++||||++||++++++ .+..||+||.|+++| T Consensus 1 m~~-~~~q~sF~~GElsP~l~gR~Dl~~y~~g~~~~~N~~~~p~Gg~~rRpGt~fva~~~~~---~~~~rLipF~fs~~q 76 (825) T protein:vir:73 1 MAF-SWIQPSFAGGEIGPSLYGRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYP---DRKCRLIPFQFSTVQ 76 (825) T ss_pred Ccc-ceeccccccceechhhcccchHHHHHHHHHHhcCcEEEecCCceecCchHHhHhhcCC---CCCEEEEEEEeCCCc Confidence 864 4667999999 7899999999999999999999999999999999999988765 467899999999999 Q ss_pred eEEEEEeCCeEEEEeCCCcEE-----EEEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccE Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEY-----QVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDA 150 (801) Q Consensus 76 ~y~l~~~~~~irv~~~~g~~~-----~v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (801) +|||||++++||||..+|.++ ..+..+|| ++.++.+|+++|++|+|||+|+++||+++.|.++..|. ... T Consensus 77 ~y~Lefg~~~lrv~~~gg~v~~~~~~~~e~~TPy--~~~~l~~l~~~QsaD~~~i~h~~~pp~~L~r~~~~~W~---l~~ 151 (825) T protein:vir:73 77 TYALEFGHNYMRVIKDGAYVLTTSNVIYELAMPY--ADTDLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQ---IVD 151 (825) T ss_pred EEEEEEeCCeEEEEeCCceEeccCCceEEEeccc--chhhhhhheeeeecCEEEEEcCCCceeEEEEecCCCcE---EEE Confidence 999999999999998777542 13345566 34467899999999999999999999999998765432 222 Q ss_pred EEEeccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCc-e--- Q lcl|Aclame:pro 151 LINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPG-F--- 226 (801) Q Consensus 151 ~~~v~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~-~--- 226 (801) + ....+++. .+..+. .....+++..+....+.+.+..... +. +..........+.+..... . T Consensus 152 ~-~f~~gp~~---~in~~~---sv~v~asg~tg~~TiTaS~a~~~~~----~v---G~~i~~~~~~v~si~~~~~~~~~~ 217 (825) T protein:vir:73 152 V-TTKNGPFE---DINVDE---TVKVYASASTGTITLTASSAIFGAE----QV---GKLFYLEQPAVDSVPVWETSKTTA 217 (825) T ss_pred E-eccCCccc---cccccc---cceeeecccCceeEEEeeccccCch----hc---CeEEEEecccccccceeeeeeEEE Confidence 2 22222221 111111 1111223333322222222221111 00 0000000000000000000 0 Q ss_pred -EEEEeCCCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeEE-EEeecCCCCcceEEEEEEcCCeEEEEEecc Q lcl|Aclame:pro 227 -IHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIV-KIVGDTSKTADQYYVRFDLNRKVWVETIGW 304 (801) Q Consensus 227 -~~i~~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v-~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~ 304 (801) ..+... +...+..... ....++++.+..|... .+.+........-+.....+.|.++.+... T Consensus 218 ~~~v~~~-~~~~~~~~~~---------------~~~~t~~~~a~~g~~~~~~~g~~~~~~~~~~~~~~~~~g~~~it~~~ 281 (825) T protein:vir:73 218 INDVRRA-DSNYYRANTS---------------GKTGTLRPSHTEGMSWDGWGGTGSDDTGIQWEYLHSGFGIAKITAVA 281 (825) T ss_pred eeeEEEC-CCceeeeecc---------------cccceeeccccCCceeEeeeeecccCCceEEEEEecCCceEEEeecc Confidence 000000 0111111111 0111223333333222 222222211111222234555666555443 Q ss_pred ceeeeEee---ccccEEEEeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEe----cCCEEEEEe Q lcl|Aclame:pro 305 NTRTHLHY---HTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFL----SGENIILSR 377 (801) Q Consensus 305 ~~~~~~~~---~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~----~~~~v~~S~ 377 (801) +....... ..+|+.++..++++++++...|.+ .++||++|+||||||+|+ +|++||||| T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~--------------~~gyPs~v~f~q~RL~f~g~~~~p~~v~~Sr 347 (825) T protein:vir:73 282 GDGLTATADVVSFIPSQVVGSANASYKWAKYAWNS--------------VNGYPSTVVYYQQRLYFAASTAYPQTIWASR 347 (825) T ss_pred ccceeeccccceecccccccCCCCCcccccCCccc--------------CCCCccEEEEEcceEEEeecCCCCCEEEEEc Confidence 32222211 235677777788888888888865 357899999999999999 589999999 Q ss_pred cCCccccccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeecccCC Q lcl|Aclame:pro 378 TSKYFNFFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTAS--DILSSRSVGLNLTTQFDVQDR 455 (801) Q Consensus 378 ~gd~~nF~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~ 455 (801) +||||||+++++ +.|||||+++++++|++.|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|.|+++ + T Consensus 348 tgd~~nF~~~~~--~~DdD~I~~~~s~~~~~~i~~~~~~~-~L~~~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~~-~ 423 (825) T protein:vir:73 348 TGDYKDFGKNNP--IQDDDRIIYTYAGRQVNEIRHLIDVG-NLVALTSGGEYTISGDQNKVLTPSAFSFSSQGNNGSS-N 423 (825) T ss_pred cCCccccccCCC--CCCCccEEEEEcCCcceeEEEEeecC-cEEEEecCceEEEecCCCcccceeeEEEEeeeeeccc-c Confidence 999999999986 46999999999999999999999985 8999999999999875 6999999999999999765 7 Q ss_pred CCcEEeCCeEEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCC-CeEEEEEcCCCCeEEEEEEcCCCEEEEEE Q lcl|Aclame:pro 456 ARPHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-GVFSISGTTAENFVAILTSGAPNRVYIYK 534 (801) Q Consensus 456 v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g-~v~~~~~~~~~~~~~~~~~~~~~~l~~~t 534 (801) ++|+.+|+.++|+|++|+ +++||.+. +.+|+|.++|+|+|++||+++ ++.+++++++|++++|++. +||.|++|+ T Consensus 424 ~~Pv~vg~~~~Fv~~~g~--~vre~~~~-~~~d~~~~~dlt~~a~hl~~~~~~~~~a~~~~p~~~~~~v~-~dg~l~~~t 499 (825) T protein:vir:73 424 VPPIAVANIALFIQEKGS--VVRDLAYS-FDVDGYQGTDLTILANHLFQKHSIVDWSFCIVPYSSAFCIR-DDGKLLVLT 499 (825) T ss_pred ccceEeCCeEEEEeCCCC--eEEEEEEe-eecCceeccchhhhhHhhccCCceEEEEEcCCCceEEEEEe-cCCeEEEEE Confidence 999999999999999986 68888655 567999999999999999997 6889999999999987764 579999999 Q ss_pred eeeCCCceEEEEEEeeecCCceEEEEEEE--cCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccc Q lcl|Aclame:pro 535 FLYIDEEIRQQSWSHWDFGDNVTVFAAQV--INSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAG 612 (801) Q Consensus 535 y~~~~~e~~~~aW~~w~~~g~~~~~~~~~--~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~ 612 (801) |+ +||++.|||||+++|+++++|+.. .+|.||++|+|..+++.+||.|.+++......++.+||||+..|+.... T Consensus 500 y~---~~q~v~aW~~~~~~g~v~~~~~i~~~~~D~l~~iV~R~~~g~~~~yiE~~~~~~~~~~~~~~~vD~g~~~~g~~~ 576 (825) T protein:vir:73 500 YL---RDQQVFAWAPQSSAGKYESTCSISEGSEDAVYFVVNRTINGQTVRYIERLSSRLFTNDEDAFFVDCGLSYDGRNT 576 (825) T ss_pred Ee---ccccceeeEEEecCCcEEEEEEecCCCccEEEEEEEEeeCCceEEEEEEecccccCCCcceeEEEEEeeecccce Confidence 97 688899999999999999999754 4699999999999999999999888877777778899999876654110 Q ss_pred cc--------------c-------------cc---cc------c------------------------------------ Q lcl|Aclame:pro 613 TY--------------N-------------DD---TY------Q------------------------------------ 620 (801) Q Consensus 613 ~~--------------~-------------~~---~~------~------------------------------------ 620 (801) .. . .. .. . T Consensus 577 ~~~l~~l~g~tv~~~~~g~~~~~v~~g~itl~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~v~~~~~~~ 656 (825) T protein:vir:73 577 SSRTMTISGGTGDWSYQVDYPVTVSGGAYFVNTDVGAQIQFPYTGTDPDTNEPVAKELRGDIISVTSNTAVVVRFNRNVP 656 (825) T ss_pred eeceeeeCCceEEEEeCCeEEEEEcCCeEEecccceEEEEecccCcccccccceeceeeEEEccccCceEEEEEeccccc Confidence 00 0 00 00 0 Q ss_pred --------ee--eccccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCee Q lcl|Aclame:pro 621 --------TS--ISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFL 690 (801) Q Consensus 621 --------t~--~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~ 690 (801) +. .....++||.||||++|.+++||.+++. .++.++.++|| ++++.|||||+|+++++++||+ T Consensus 657 a~~~~~~~t~~~~a~~~~~gL~hLeG~~v~v~~Dg~~~~~-----~~V~~G~vtl~--~~~~~v~vGl~y~~~~~~l~~~ 729 (825) T protein:vir:73 657 PVLRNVATTNWQMARQTFSGLAHLEGQTVNILSDASVEPQ-----KTVTGGAVTLE--SPGAVVHIGLPITAEFETLDIN 729 (825) T ss_pred ceeeeecccCCCcchheeccccccCCceEEEEECCeeeCC-----eEecCcEEEec--CCceEEEEeeCccceEEecccc Confidence 00 0012458999999999999999999873 46678899997 6899999999999999999999 Q ss_pred EeccCCCCccceEEeeeEEEEEEEEEeecceeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEE-eeecc Q lcl|Aclame:pro 691 IKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPV-VGNAQ 769 (801) Q Consensus 691 ~~~~~~~~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~-~~~~~ 769 (801) +..+ | ..++.++||+++.++|.+|.++.+..+...-+....+. ...+...||++||++++++ .+|++ T Consensus 730 ~~~~-g-----~~~g~~~ri~~~~~~~~~s~~~~~g~~~~~l~~~~~r~------~~~~~~~~~~~tG~~~~~~~~~~~~ 797 (825) T protein:vir:73 730 INGQ-E-----TLLDKKQVIPTVTMVVNASRGIWATTPGGTWYEYPQRE------FEFYDDPVDDATGKVEVKLDSNWDK 797 (825) T ss_pred cCCC-c-----cccCccEEEEEEEEEEEeeeeEEEecCCCcceEeeccC------CCcccCCCccccCcEEEecCCCCCC Confidence 7532 2 33455679999999999999999875443222222211 1234445789999999997 78999 Q ss_pred eeEEEEEECCCCCEEEEEEEEEEEEecc Q lcl|Aclame:pro 770 TNTVTIESDASTPLNIIGCGWEGNYLRR 797 (801) Q Consensus 770 ~~~v~I~~~~P~P~tvlai~weg~y~~r 797 (801) +.+|+|+|++|||||||||..|-..+-= T Consensus 798 ~~~~~i~q~~PlP~tvlav~~~~~~~g~ 825 (825) T protein:vir:73 798 NGRVKVRQLDPLPLSVLAVLPRLTVGGF 825 (825) T ss_pred ccEEEEEEcCCCCEEEEEEEEEEEecCC Confidence 9999999999999999999988765443 No 22 >protein:vir:98487 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1592 # MgeName: BMP-1 # Cross-refs: genbank:acc:NP_996575;genbank:gi:45569506;genbank:GeneID:2767815 Probab=100.00 E-value=8.3e-156 Score=870.80 Aligned_cols=662 Identities=13% Similarity=0.136 Sum_probs=491.4 Q ss_pred Cceeeeechhhhcc-----cccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~ 75 (801) |++++.+++||.+| +.+|.|++||+++|++|+||++.|+||++||||++|+++++++ +.+.||+||.|+++| T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~---~~~~rlipf~~~~~~ 77 (681) T protein:vir:98 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDS---AKKVRLIPFTYSVTQ 77 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCC---CCcEEEEEEEeCCCc Confidence 99999999999999 6799999999999999999999999999999999999998865 356899999999999 Q ss_pred eEEEEEeCCeEEEEeCCCcEEE----EEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEE Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQ----VRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDAL 151 (801) Q Consensus 76 ~y~l~~~~~~irv~~~~g~~~~----v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (801) +|||||++++||||..+|.++. .+..+|| ++.++.+|+|+|+||+|||+|+++||++|.|.++..|. ...+ T Consensus 78 ~~~l~~g~~~~r~~~~~~~~~~~~~~~~~~tpy--~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W~---l~~~ 152 (681) T protein:vir:98 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPY--AEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQ---LATI 152 (681) T ss_pred eEEEEEeCCeEEEEeCCcEEeeCcEeEEecCCC--ChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCceE---EEEE Confidence 9999999999999976665432 2345555 34567899999999999999999999999998776541 1111 Q ss_pred EEeccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEe Q lcl|Aclame:pro 152 INVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILA 231 (801) Q Consensus 152 ~~v~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~ 231 (801) .+..+++... ++ +++...++.. .. +. .++.+ T Consensus 153 -~f~~~p~~p~-~~-----------~at~~~~~~~----------------------~t-------~~-------~~v~a 183 (681) T protein:vir:98 153 -AFTSPVATPT-SV-----------TATSNNKGTD----------------------YT-------YR-------YVVTA 183 (681) T ss_pred -Eeccccccce-ee-----------eeeccCCccc----------------------ee-------Ee-------EEEEE Confidence 1222222100 00 0000000000 00 00 00001 Q ss_pred CCCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEe Q lcl|Aclame:pro 232 PNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLH 311 (801) Q Consensus 232 ~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~ 311 (801) .+....+ +.......+ ++.. .+ ..+....+.++...+...|.+. ....+.|.. ++........ T Consensus 184 vda~t~~--~s~~~~~~t----vt~~--~~-------~~~~~~t~~w~a~~g~~~~~V~-~~~~gi~g~-ig~~~~~~~~ 246 (681) T protein:vir:98 184 LDAEGKT--ESAPSSAGT----CTNN--LF-------TNGGANTIAWSASSGASRYNVY-KEQGGLYGY-IGQTTGTSLV 246 (681) T ss_pred eecccce--eecCCcceE----Eeee--ee-------cCCcceeEEEEecCCceeeeec-ccceeEEEE-eeccceeeee Confidence 0000000 000000000 0000 00 0111222333333333333322 222333422 2222222222 Q ss_pred eccccEEEEeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEe----cCCEEEEEecCCccccccc Q lcl|Aclame:pro 312 YHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFL----SGENIILSRTSKYFNFFPA 387 (801) Q Consensus 312 ~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~----~~~~v~~S~~gd~~nF~~~ 387 (801) ...+ .+......+...++ ++-.++||++|+||||||+|+ +||+|||||+||||||+++ T Consensus 247 ~~~~-----------------~~~~~~t~~~~~~~-~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~ 308 (681) T protein:vir:98 247 DDNI-----------------APDLSVTPPIYDAV-FNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYS 308 (681) T ss_pred eccc-----------------ccCccccccccccc-cccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCccccccc Confidence 2111 11111111112233 233578999999999999999 5899999999999999999 Q ss_pred cccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeecccCCCCcEEeCCeE Q lcl|Aclame:pro 388 SVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTAS--DILSSRSVGLNLTTQFDVQDRARPHGVGRNV 465 (801) Q Consensus 388 s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v 465 (801) +++ .|||||++++++++++.|+|+++++ +|+|||+++||.|+++ ++|||+|++++++|.|++ ++|+|+.+|+++ T Consensus 309 ~~~--~ddD~i~~~~~~~~~~~i~~~v~~~-~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~vg~~v 384 (681) T protein:vir:98 309 LPV--RDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTT 384 (681) T ss_pred CCC--CCCccEEEEEcCCcceeEEEEEecC-cEEEEEcCcEEEEecCCCccccceeEEEEEeeeecc-ccccceeeCCeE Confidence 864 6999999999999999999999995 7999999999999874 699999999999999976 579999999999 Q ss_pred EEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCC-CeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEE Q lcl|Aclame:pro 466 YFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-GVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQ 544 (801) Q Consensus 466 ~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g-~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~ 544 (801) +|+|++|+ ++|||.+. +.+|+|++.|+|++++|++++ ++.+++++++|++++|++. +||+|++|+|+ +||+| T Consensus 385 ~fv~~~g~--~vre~~y~-~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p~~~~~~v~-~dg~l~~~ty~---~eq~v 457 (681) T protein:vir:98 385 IYGAARGG--HVRELAYN-WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFIS-SSGKLLGLTYV---PEQQI 457 (681) T ss_pred EEEecCCC--EEEEEEEe-eecCceeccchhhhhhhhcCCCCeEEEEEecCCCEEEEEEe-cCCcEEEEEEe---cccce Confidence 99999996 57888654 568999999999999999987 8999999999999988765 56999999996 68889 Q ss_pred EEEEeeecCCceEEEEEE--EcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEeccccccccccccee Q lcl|Aclame:pro 545 QSWSHWDFGDNVTVFAAQ--VINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTS 622 (801) Q Consensus 545 ~aW~~w~~~g~~~~~~~~--~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~ 622 (801) .|||||+++|+++++|+. ..+|.||++|+|++++..+++.|.++..........+|+||...+.... T Consensus 458 ~aW~~~~~~g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~----------- 526 (681) T protein:vir:98 458 GAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEP----------- 526 (681) T ss_pred eeEEEEecCCcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcc----------- Confidence 999999999999999874 3479999999999998888888888765544555678999987654321 Q ss_pred eccccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccce Q lcl|Aclame:pro 623 ISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTAT 702 (801) Q Consensus 623 ~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~ 702 (801) ...++||.|++|+++.+++||.+++.. .+.++.++++ .++++|+|||+|+++++++||+++.+++.. T Consensus 527 --~~~~sgl~~leG~tv~i~aDG~~~~~~-----~V~~G~itl~--~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~---- 593 (681) T protein:vir:98 527 --VSHISGLEHLEGKTVSILADGAVHPQR-----VVTDGAIDLD--VEAGTVHIGLPITAELQTLPVAMQLDGSFG---- 593 (681) T ss_pred --eeeeccccCCCCcEEEEEeCCeecCcE-----eecCcEEEeC--cCCceEEEeeeceeEEEecceeeecCCccc---- Confidence 235789999999999999999988644 3455667764 678999999999999999999998776643 Q ss_pred EEeeeEEEEEEEEEeecceeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEEe-eecceeEEEEEECCCC Q lcl|Aclame:pro 703 EDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVV-GNAQTNTVTIESDAST 781 (801) Q Consensus 703 ~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-~~~~~~~v~I~~~~P~ 781 (801) ..+++||+|+.+++.+|+++++.++....+....+.+.+++ ..++++||++++|+. +|+++.+|+|+|++|+ T Consensus 594 -~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~~~~~~g------~~~~l~TG~~~v~v~~~~~~~~~v~I~qd~Pl 666 (681) T protein:vir:98 594 -QGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYG------SPPALKSEEIPLVLSPKWGDSGQLFVRQADPL 666 (681) T ss_pred -CCceEEEEEEEEEEEcccceEEeeCCCceEEEEEecccccc------ccCCccCCeEEEEeCCCcCcceEEEEEECCCc Confidence 34567999999999999999998766555544444333332 346789999999985 7899999999999999 Q ss_pred CEEEEEEEEEEEEec Q lcl|Aclame:pro 782 PLNIIGCGWEGNYLR 796 (801) Q Consensus 782 P~tvlai~weg~y~~ 796 (801) ||+|+||+||-...- T Consensus 667 P~tvlsi~~ev~vgg 681 (681) T protein:vir:98 667 PLMIVSMSAEIAIGA 681 (681) T ss_pred CEEEEEeeEEEEeeC Confidence 999999999988887 No 23 >protein:vir:107802 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1673 # MgeName: BIP-1 # Cross-refs: genbank:acc:NP_996623;genbank:gi:45580757;genbank:GeneID:2767878 Probab=100.00 E-value=8.3e-156 Score=870.80 Aligned_cols=662 Identities=13% Similarity=0.136 Sum_probs=491.4 Q ss_pred Cceeeeechhhhcc-----cccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~ 75 (801) |++++.+++||.+| +.+|.|++||+++|++|+||++.|+||++||||++|+++++++ +.+.||+||.|+++| T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~---~~~~rlipf~~~~~~ 77 (681) T protein:vir:10 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDS---AKKVRLIPFTYSVTQ 77 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCC---CCcEEEEEEEeCCCc Confidence 99999999999999 6799999999999999999999999999999999999998865 356899999999999 Q ss_pred eEEEEEeCCeEEEEeCCCcEEE----EEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEE Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQ----VRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDAL 151 (801) Q Consensus 76 ~y~l~~~~~~irv~~~~g~~~~----v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (801) +|||||++++||||..+|.++. .+..+|| ++.++.+|+|+|+||+|||+|+++||++|.|.++..|. ...+ T Consensus 78 ~~~l~~g~~~~r~~~~~~~~~~~~~~~~~~tpy--~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W~---l~~~ 152 (681) T protein:vir:10 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPY--AEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQ---LATI 152 (681) T ss_pred eEEEEEeCCeEEEEeCCcEEeeCcEeEEecCCC--ChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCceE---EEEE Confidence 9999999999999976665432 2345555 34567899999999999999999999999998776541 1111 Q ss_pred EEeccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEe Q lcl|Aclame:pro 152 INVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILA 231 (801) Q Consensus 152 ~~v~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~ 231 (801) .+..+++... ++ +++...++.. .. +. .++.+ T Consensus 153 -~f~~~p~~p~-~~-----------~at~~~~~~~----------------------~t-------~~-------~~v~a 183 (681) T protein:vir:10 153 -AFTSPVATPT-SV-----------TATSNNKGTD----------------------YT-------YR-------YVVTA 183 (681) T ss_pred -Eeccccccce-ee-----------eeeccCCccc----------------------ee-------Ee-------EEEEE Confidence 1222222100 00 0000000000 00 00 00001 Q ss_pred CCCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEe Q lcl|Aclame:pro 232 PNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLH 311 (801) Q Consensus 232 ~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~ 311 (801) .+....+ +.......+ ++.. .+ ..+....+.++...+...|.+. ....+.|.. ++........ T Consensus 184 vda~t~~--~s~~~~~~t----vt~~--~~-------~~~~~~t~~w~a~~g~~~~~V~-~~~~gi~g~-ig~~~~~~~~ 246 (681) T protein:vir:10 184 LDAEGKT--ESAPSSAGT----CTNN--LF-------TNGGANTIAWSASSGASRYNVY-KEQGGLYGY-IGQTTGTSLV 246 (681) T ss_pred eecccce--eecCCcceE----Eeee--ee-------cCCcceeEEEEecCCceeeeec-ccceeEEEE-eeccceeeee Confidence 0000000 000000000 0000 00 0111222333333333333322 222333422 2222222222 Q ss_pred eccccEEEEeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEe----cCCEEEEEecCCccccccc Q lcl|Aclame:pro 312 YHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFL----SGENIILSRTSKYFNFFPA 387 (801) Q Consensus 312 ~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~----~~~~v~~S~~gd~~nF~~~ 387 (801) ...+ .+......+...++ ++-.++||++|+||||||+|+ +||+|||||+||||||+++ T Consensus 247 ~~~~-----------------~~~~~~t~~~~~~~-~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~ 308 (681) T protein:vir:10 247 DDNI-----------------APDLSVTPPIYDAV-FNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYS 308 (681) T ss_pred eccc-----------------ccCccccccccccc-cccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCccccccc Confidence 2111 11111111112233 233578999999999999999 5899999999999999999 Q ss_pred cccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeecccCCCCcEEeCCeE Q lcl|Aclame:pro 388 SVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTAS--DILSSRSVGLNLTTQFDVQDRARPHGVGRNV 465 (801) Q Consensus 388 s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v 465 (801) +++ .|||||++++++++++.|+|+++++ +|+|||+++||.|+++ ++|||+|++++++|.|++ ++|+|+.+|+++ T Consensus 309 ~~~--~ddD~i~~~~~~~~~~~i~~~v~~~-~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~vg~~v 384 (681) T protein:vir:10 309 LPV--RDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTT 384 (681) T ss_pred CCC--CCCccEEEEEcCCcceeEEEEEecC-cEEEEEcCcEEEEecCCCccccceeEEEEEeeeecc-ccccceeeCCeE Confidence 864 6999999999999999999999995 7999999999999874 699999999999999976 579999999999 Q ss_pred EEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCC-CeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEE Q lcl|Aclame:pro 466 YFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-GVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQ 544 (801) Q Consensus 466 ~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g-~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~ 544 (801) +|+|++|+ ++|||.+. +.+|+|++.|+|++++|++++ ++.+++++++|++++|++. +||+|++|+|+ +||+| T Consensus 385 ~fv~~~g~--~vre~~y~-~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p~~~~~~v~-~dg~l~~~ty~---~eq~v 457 (681) T protein:vir:10 385 IYGAARGG--HVRELAYN-WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFIS-SSGKLLGLTYV---PEQQI 457 (681) T ss_pred EEEecCCC--EEEEEEEe-eecCceeccchhhhhhhhcCCCCeEEEEEecCCCEEEEEEe-cCCcEEEEEEe---cccce Confidence 99999996 57888654 568999999999999999987 8999999999999988765 56999999996 68889 Q ss_pred EEEEeeecCCceEEEEEE--EcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEeccccccccccccee Q lcl|Aclame:pro 545 QSWSHWDFGDNVTVFAAQ--VINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTS 622 (801) Q Consensus 545 ~aW~~w~~~g~~~~~~~~--~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~ 622 (801) .|||||+++|+++++|+. ..+|.||++|+|++++..+++.|.++..........+|+||...+.... T Consensus 458 ~aW~~~~~~g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~----------- 526 (681) T protein:vir:10 458 GAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEP----------- 526 (681) T ss_pred eeEEEEecCCcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcc----------- Confidence 999999999999999874 3479999999999998888888888765544555678999987654321 Q ss_pred eccccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccce Q lcl|Aclame:pro 623 ISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTAT 702 (801) Q Consensus 623 ~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~ 702 (801) ...++||.|++|+++.+++||.+++.. .+.++.++++ .++++|+|||+|+++++++||+++.+++.. T Consensus 527 --~~~~sgl~~leG~tv~i~aDG~~~~~~-----~V~~G~itl~--~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~---- 593 (681) T protein:vir:10 527 --VSHISGLEHLEGKTVSILADGAVHPQR-----VVTDGAIDLD--VEAGTVHIGLPITAELQTLPVAMQLDGSFG---- 593 (681) T ss_pred --eeeeccccCCCCcEEEEEeCCeecCcE-----eecCcEEEeC--cCCceEEEeeeceeEEEecceeeecCCccc---- Confidence 235789999999999999999988644 3455667764 678999999999999999999998776643 Q ss_pred EEeeeEEEEEEEEEeecceeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEEe-eecceeEEEEEECCCC Q lcl|Aclame:pro 703 EDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVV-GNAQTNTVTIESDAST 781 (801) Q Consensus 703 ~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-~~~~~~~v~I~~~~P~ 781 (801) ..+++||+|+.+++.+|+++++.++....+....+.+.+++ ..++++||++++|+. +|+++.+|+|+|++|+ T Consensus 594 -~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~~~~~~g------~~~~l~TG~~~v~v~~~~~~~~~v~I~qd~Pl 666 (681) T protein:vir:10 594 -QGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYG------SPPALKSEEIPLVLSPKWGDSGQLFVRQADPL 666 (681) T ss_pred -CCceEEEEEEEEEEEcccceEEeeCCCceEEEEEecccccc------ccCCccCCeEEEEeCCCcCcceEEEEEECCCc Confidence 34567999999999999999998766555544444333332 346789999999985 7899999999999999 Q ss_pred CEEEEEEEEEEEEec Q lcl|Aclame:pro 782 PLNIIGCGWEGNYLR 796 (801) Q Consensus 782 P~tvlai~weg~y~~ 796 (801) ||+|+||+||-...- T Consensus 667 P~tvlsi~~ev~vgg 681 (681) T protein:vir:10 667 PLMIVSMSAEIAIGA 681 (681) T ss_pred CEEEEEeeEEEEeeC Confidence 999999999988887 No 24 >protein:vir:107423 Length: 681 # NCBI annotation: Bbp13 # Family: family:all:780 # MgeID: mge:1537 # MgeName: BPP-1 # Cross-refs: genbank:acc:NP_958682;genbank:gi:41179374;genbank:GeneID:2717217 Probab=100.00 E-value=8.3e-156 Score=870.80 Aligned_cols=662 Identities=13% Similarity=0.136 Sum_probs=491.4 Q ss_pred Cceeeeechhhhcc-----cccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~ 75 (801) |++++.+++||.+| +.+|.|++||+++|++|+||++.|+||++||||++|+++++++ +.+.||+||.|+++| T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~---~~~~rlipf~~~~~~ 77 (681) T protein:vir:10 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDS---AKKVRLIPFTYSVTQ 77 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCC---CCcEEEEEEEeCCCc Confidence 99999999999999 6799999999999999999999999999999999999998865 356899999999999 Q ss_pred eEEEEEeCCeEEEEeCCCcEEE----EEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEE Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQ----VRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDAL 151 (801) Q Consensus 76 ~y~l~~~~~~irv~~~~g~~~~----v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (801) +|||||++++||||..+|.++. .+..+|| ++.++.+|+|+|+||+|||+|+++||++|.|.++..|. ...+ T Consensus 78 ~~~l~~g~~~~r~~~~~~~~~~~~~~~~~~tpy--~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W~---l~~~ 152 (681) T protein:vir:10 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPY--AEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNWQ---LATI 152 (681) T ss_pred eEEEEEeCCeEEEEeCCcEEeeCcEeEEecCCC--ChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCceE---EEEE Confidence 9999999999999976665432 2345555 34567899999999999999999999999998776541 1111 Q ss_pred EEeccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEe Q lcl|Aclame:pro 152 INVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILA 231 (801) Q Consensus 152 ~~v~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~ 231 (801) .+..+++... ++ +++...++.. .. +. .++.+ T Consensus 153 -~f~~~p~~p~-~~-----------~at~~~~~~~----------------------~t-------~~-------~~v~a 183 (681) T protein:vir:10 153 -AFTSPVATPT-SV-----------TATSNNKGTD----------------------YT-------YR-------YVVTA 183 (681) T ss_pred -Eeccccccce-ee-----------eeeccCCccc----------------------ee-------Ee-------EEEEE Confidence 1222222100 00 0000000000 00 00 00001 Q ss_pred CCCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEe Q lcl|Aclame:pro 232 PNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLH 311 (801) Q Consensus 232 ~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~ 311 (801) .+....+ +.......+ ++.. .+ ..+....+.++...+...|.+. ....+.|.. ++........ T Consensus 184 vda~t~~--~s~~~~~~t----vt~~--~~-------~~~~~~t~~w~a~~g~~~~~V~-~~~~gi~g~-ig~~~~~~~~ 246 (681) T protein:vir:10 184 LDAEGKT--ESAPSSAGT----CTNN--LF-------TNGGANTIAWSASSGASRYNVY-KEQGGLYGY-IGQTTGTSLV 246 (681) T ss_pred eecccce--eecCCcceE----Eeee--ee-------cCCcceeEEEEecCCceeeeec-ccceeEEEE-eeccceeeee Confidence 0000000 000000000 0000 00 0111222333333333333322 222333422 2222222222 Q ss_pred eccccEEEEeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEe----cCCEEEEEecCCccccccc Q lcl|Aclame:pro 312 YHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFL----SGENIILSRTSKYFNFFPA 387 (801) Q Consensus 312 ~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~----~~~~v~~S~~gd~~nF~~~ 387 (801) ...+ .+......+...++ ++-.++||++|+||||||+|+ +||+|||||+||||||+++ T Consensus 247 ~~~~-----------------~~~~~~t~~~~~~~-~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~ 308 (681) T protein:vir:10 247 DDNI-----------------APDLSVTPPIYDAV-FNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYS 308 (681) T ss_pred eccc-----------------ccCccccccccccc-cccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCccccccc Confidence 2111 11111111112233 233578999999999999999 5899999999999999999 Q ss_pred cccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeecccCCCCcEEeCCeE Q lcl|Aclame:pro 388 SVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTAS--DILSSRSVGLNLTTQFDVQDRARPHGVGRNV 465 (801) Q Consensus 388 s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v 465 (801) +++ .|||||++++++++++.|+|+++++ +|+|||+++||.|+++ ++|||+|++++++|.|++ ++|+|+.+|+++ T Consensus 309 ~~~--~ddD~i~~~~~~~~~~~i~~~v~~~-~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~vg~~v 384 (681) T protein:vir:10 309 LPV--RDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTT 384 (681) T ss_pred CCC--CCCccEEEEEcCCcceeEEEEEecC-cEEEEEcCcEEEEecCCCccccceeEEEEEeeeecc-ccccceeeCCeE Confidence 864 6999999999999999999999995 7999999999999874 699999999999999976 579999999999 Q ss_pred EEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCC-CeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEE Q lcl|Aclame:pro 466 YFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-GVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQ 544 (801) Q Consensus 466 ~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g-~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~ 544 (801) +|+|++|+ ++|||.+. +.+|+|++.|+|++++|++++ ++.+++++++|++++|++. +||+|++|+|+ +||+| T Consensus 385 ~fv~~~g~--~vre~~y~-~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p~~~~~~v~-~dg~l~~~ty~---~eq~v 457 (681) T protein:vir:10 385 IYGAARGG--HVRELAYN-WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFIS-SSGKLLGLTYV---PEQQI 457 (681) T ss_pred EEEecCCC--EEEEEEEe-eecCceeccchhhhhhhhcCCCCeEEEEEecCCCEEEEEEe-cCCcEEEEEEe---cccce Confidence 99999996 57888654 568999999999999999987 8999999999999988765 56999999996 68889 Q ss_pred EEEEeeecCCceEEEEEE--EcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEeccccccccccccee Q lcl|Aclame:pro 545 QSWSHWDFGDNVTVFAAQ--VINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTS 622 (801) Q Consensus 545 ~aW~~w~~~g~~~~~~~~--~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~ 622 (801) .|||||+++|+++++|+. ..+|.||++|+|++++..+++.|.++..........+|+||...+.... T Consensus 458 ~aW~~~~~~g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~----------- 526 (681) T protein:vir:10 458 GAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEP----------- 526 (681) T ss_pred eeEEEEecCCcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcc----------- Confidence 999999999999999874 3479999999999998888888888765544555678999987654321 Q ss_pred eccccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccce Q lcl|Aclame:pro 623 ISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTAT 702 (801) Q Consensus 623 ~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~ 702 (801) ...++||.|++|+++.+++||.+++.. .+.++.++++ .++++|+|||+|+++++++||+++.+++.. T Consensus 527 --~~~~sgl~~leG~tv~i~aDG~~~~~~-----~V~~G~itl~--~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~---- 593 (681) T protein:vir:10 527 --VSHISGLEHLEGKTVSILADGAVHPQR-----VVTDGAIDLD--VEAGTVHIGLPITAELQTLPVAMQLDGSFG---- 593 (681) T ss_pred --eeeeccccCCCCcEEEEEeCCeecCcE-----eecCcEEEeC--cCCceEEEeeeceeEEEecceeeecCCccc---- Confidence 235789999999999999999988644 3455667764 678999999999999999999998776643 Q ss_pred EEeeeEEEEEEEEEeecceeEEEEeCCCCcceeeeeccceeccccccCCccccccceEEEEEe-eecceeEEEEEECCCC Q lcl|Aclame:pro 703 EDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVV-GNAQTNTVTIESDAST 781 (801) Q Consensus 703 ~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-~~~~~~~v~I~~~~P~ 781 (801) ..+++||+|+.+++.+|+++++.++....+....+.+.+++ ..++++||++++|+. +|+++.+|+|+|++|+ T Consensus 594 -~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~~~~~~g------~~~~l~TG~~~v~v~~~~~~~~~v~I~qd~Pl 666 (681) T protein:vir:10 594 -QGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYG------SPPALKSEEIPLVLSPKWGDSGQLFVRQADPL 666 (681) T ss_pred -CCceEEEEEEEEEEEcccceEEeeCCCceEEEEEecccccc------ccCCccCCeEEEEeCCCcCcceEEEEEECCCc Confidence 34567999999999999999998766555544444333332 346789999999985 7899999999999999 Q ss_pred CEEEEEEEEEEEEec Q lcl|Aclame:pro 782 PLNIIGCGWEGNYLR 796 (801) Q Consensus 782 P~tvlai~weg~y~~ 796 (801) ||+|+||+||-...- T Consensus 667 P~tvlsi~~ev~vgg 681 (681) T protein:vir:10 667 PLMIVSMSAEIAIGA 681 (681) T ss_pred CEEEEEeeEEEEeeC Confidence 999999999988887 No 25 >protein:vir:102644 Length: 594 # NCBI annotation: Hypothetical protein # Family: family:all:780 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024422;genbank:gi:48696643;genbank:GeneID:2948111 Probab=100.00 E-value=3.9e-135 Score=757.44 Aligned_cols=558 Identities=12% Similarity=0.065 Sum_probs=442.2 Q ss_pred Cceeeeechhhhcc-----cccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~ 75 (801) ||.+. ++||.+| +.+|.|++||+++|++|+||++.|+||++||||++|+++++++ +.++||+||.++++| T Consensus 1 m~~~~--~~~F~~GelsP~l~~r~Dl~~y~~~~~~~~n~~~~~~G~~~rR~G~~~~~~~~~~---~~~~~lipF~~s~~~ 75 (594) T protein:vir:10 1 MADFS--QTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDG---EVRLFRLPAVDAPSN 75 (594) T ss_pred Cceee--ccccCcceecceeccchhHHHHHHHHhhhhceEEEecCCeecCChhHhhhhccCC---CCCEEEEEEEeCCCC Confidence 99987 5999999 5799999999999999999999999999999999999998764 457899999999999 Q ss_pred eEEEEEeCCeEEEEeCCCcEEEEEccCccccc-------cCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCc Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQVRGDRSYVRT-------ANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQG 148 (801) Q Consensus 76 ~y~l~~~~~~irv~~~~g~~~~v~~~~~y~~~-------~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~ 148 (801) +|+|||+++++|||..+|.+.......+|..+ ..++.+|+|+|++|++|++|+.++|+++.|.++..| T Consensus 76 ~~~le~g~~~~r~~~~~~~~v~~~~~~~~~~~tp~~~t~~~~l~~i~~tqsad~~~~~~~~~~p~~L~R~~~~~w----- 150 (594) T protein:vir:10 76 DVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAW----- 150 (594) T ss_pred eEEEEEcCCeEEEEecCcEEEEccCCCcccccccceeeccCCccceEEEEEeeEEEEEcCCCCceEEEEccCCCc----- Confidence 99999999999999877766555544444221 235778999999999999999999999887543211 Q ss_pred cEEEEeccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEE Q lcl|Aclame:pro 149 DALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIH 228 (801) Q Consensus 149 ~~~~~v~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 228 (801) .+ T Consensus 151 ----------------------------------------------------------------------~~-------- 152 (594) T protein:vir:10 151 ----------------------------------------------------------------------QF-------- 152 (594) T ss_pred ----------------------------------------------------------------------eE-------- Confidence 00 Q ss_pred EEeCCCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceee Q lcl|Aclame:pro 229 ILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRT 308 (801) Q Consensus 229 i~~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~ 308 (801) ...+ +. + . T Consensus 153 ------------~~~~----------------~~--------~----------~-------------------------- 160 (594) T protein:vir:10 153 ------------VNMH----------------TG--------A----------V-------------------------- 160 (594) T ss_pred ------------Eecc----------------cC--------c----------c-------------------------- Confidence 0000 00 0 0 Q ss_pred eEeeccccEEEEeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEec----CCEEEEEecCCcccc Q lcl|Aclame:pro 309 HLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS----GENIILSRTSKYFNF 384 (801) Q Consensus 309 ~~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~----~~~v~~S~~gd~~nF 384 (801) ..+|. -.+||++|+||||||+|++ |++|||||+|||+|| T Consensus 161 ----------------------p~~~~---------------~~~~p~~v~f~q~RL~f~~~~~~p~~v~~Srtgd~~nF 203 (594) T protein:vir:10 161 ----------------------PAEWS---------------PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDI 203 (594) T ss_pred ----------------------ccccc---------------CCccceEEEEEeeeEEEEeCCCCCceEEEEeccccccc Confidence 00000 0258999999999999998 689999999999999 Q ss_pred ccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeecccCCCCcEEeC Q lcl|Aclame:pro 385 FPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTAS--DILSSRSVGLNLTTQFDVQDRARPHGVG 462 (801) Q Consensus 385 ~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~v~Pv~vg 462 (801) ++++++ .|||||++.+ +++.+.| |+++++++|+|||+++||+|+++ ++|||+|++++++|.+ +++.++|+.+| T Consensus 204 ~~~~~~--~ddd~i~~~~-s~~~~~~-~~v~~~~~L~i~t~~~e~~l~~~~~~~lTp~~~~~~~~s~~-g~~~~~P~~vg 278 (594) T protein:vir:10 204 APSTAN--NPNDPISFVG-IMEGTPC-WIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQ-GTAAVQGIPAE 278 (594) T ss_pred ccCCCC--CCCccEEEEE-ecccceE-EEEecCCceEEEecCceEEEecCCCcccccceEEEEEeeee-ccCCCcceeeC Confidence 999976 5999999954 5565555 56777889999999999999875 5899999999999866 66899999999 Q ss_pred CeEEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcC-------CCeEEEEEcCCCCeEEEEEEcCCCEEEEEEe Q lcl|Aclame:pro 463 RNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIP-------NGVFSISGTTAENFVAILTSGAPNRVYIYKF 535 (801) Q Consensus 463 ~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~-------g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty 535 (801) +.++|+|++|+ ++|||.+. +.+|+|.+.|||+|++|+++ ++|.+++++++|++++|++. +||.|.+++| T Consensus 279 ~~~~fv~~~g~--~vre~~y~-~~~d~y~~~dlt~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~v~-~dG~l~~~ty 354 (594) T protein:vir:10 279 EQVIFCSRNKS--KVYAMNYV-REQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSLWVVL-ENGQINYCCF 354 (594) T ss_pred CeEEEEcCCCC--EEEEEEEe-eccCceeccchhhhhhhhcCccccccCceEEEEEEecCCceEEEEEe-CCCeEEEEEE Confidence 99999999986 68888654 56799999999999999974 57899999999999987764 5789999999 Q ss_pred eeCCCceEEEEEEeeec-CCceEEEEEEE--cCCEEEEEEEeCC--CEEEEEE--EEeeccCCCCcccceeeeeeeEEEe Q lcl|Aclame:pro 536 LYIDEEIRQQSWSHWDF-GDNVTVFAAQV--INSTMTVLMSNEH--AVWMGRL--HFTKDSIDLPGEPYRLYIDAKRKYT 608 (801) Q Consensus 536 ~~~~~e~~~~aW~~w~~-~g~~~~~~~~~--~~d~ly~vv~r~~--~~~~~~~--~~~~~~~~~~~~~~~~~lD~~~~~~ 608 (801) + +||+|.|||||++ +|.|+++|+.. .+|++|++|+|.+ ++..+++ .|.++..........+|+|+...+. T Consensus 355 ~---~eq~v~aWs~~~~t~G~v~~va~i~~~~~d~l~~~V~R~~ti~g~~~~y~~lE~~~~~~~~~~~~~~~~d~~~~~~ 431 (594) T protein:vir:10 355 D---RTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQN 431 (594) T ss_pred e---cccceeeeEeeccCCCcEEEEEEeecCCCCEEEEEEEECCccccceeeEEEeecCCCccccccccceeeeeccccc Confidence 5 7888999999995 78999999853 5799999999954 5555555 3344433222333345666644331 Q ss_pred cccccccccccceeeccccccCCcccCceEEEEecCCceeeccccccccccCcEEEEc--CCccCceEEEEEeeeEEEEe Q lcl|Aclame:pro 609 IPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLD--GNQEGQVVYIGFNIPFTYTF 686 (801) Q Consensus 609 ~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~--~~~~~~~v~vGl~y~s~v~~ 686 (801) ..++||.||+|+++.+++||.+++. ..+.++.++|+ ++.++++|||||+|++++++ T Consensus 432 -----------------~~vsgl~hLeg~tv~v~aDG~~~~~-----~~V~~g~itL~~~~~~~~~~v~VGl~Y~s~i~~ 489 (594) T protein:vir:10 432 -----------------GDVLNLDRYIGRTAVIFSKYGLEAE-----VEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRT 489 (594) T ss_pred -----------------ceeecccccCCceEEEEeCCeecCC-----eEEcCCeeEeeccCCCCcceEEEeeeeeEEEEe Confidence 1356899999999999999998863 34556667775 57889999999999999999 Q ss_pred CCeeEeccCCCCccceEEeeeEEEEEEEEEeecceeEEEEeCCCCcceeeeeccceeccccccCCccccccceEE--EEE Q lcl|Aclame:pro 687 SKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYR--FPV 764 (801) Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~--vp~ 764 (801) +||+++.++| +...+|+||+|++|+|.+|++++++.+........ ........+..+.|++++|+.. ++. T Consensus 490 lp~~~~~~~g-----s~~g~r~ri~r~~v~~~~S~g~~vg~~~~~~r~~~---~~~~~~~~~~~g~~~~~tg~~~v~~~~ 561 (594) T protein:vir:10 490 LTPSNGDMKK-----SMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTD---DIMDARLLDFSSNSGSSNGTRLVDYNP 561 (594) T ss_pred ecccccCCcc-----cccCccEEEEEEEEEEEcceeeEECCcccccccch---hhccccCCcccCcccccCCceEEEEcc Confidence 9999986554 34556899999999999999999875543221111 1111223456677888888754 455 Q ss_pred eeecceeEEEEEECCCCCEEEEEEEEEEEEecc Q lcl|Aclame:pro 765 VGNAQTNTVTIESDASTPLNIIGCGWEGNYLRR 797 (801) Q Consensus 765 ~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r 797 (801) .||+++.+|+|+|++|+||+|+||.+|-..++- T Consensus 562 ~G~~~~~~i~I~qd~PlPltvlai~~ev~~~~~ 594 (594) T protein:vir:10 562 LGWENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) T ss_pred CCcCcccEEEEEECCCcCEEEEEEEEEEEeccC Confidence 789999999999999999999999999999998 No 26 >protein:vir:94602 Length: 1012 # NCBI annotation: PfWMP4_35 # Family: family:all:12083 # MgeID: mge:1525 # MgeName: Pf-WMP4 # Cross-refs: genbank:acc:YP_762665;genbank:gi:115304373;genbank:GeneID:5142302 Probab=99.70 E-value=1.2e-15 Score=102.31 Aligned_cols=774 Identities=13% Similarity=0.124 Sum_probs=331.1 Q ss_pred Cce-----eeeechhhhccc--ccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCC Q lcl|Aclame:pro 1 MAL-----ISQSIKNLKGGI--SQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDE 73 (801) Q Consensus 1 Ma~-----v~~~~~~~~~Gv--sqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~ 73 (801) |-. +++...+=.+|+ |.-+-..-|. +--...|+=.+..|-+.||.|+..+-.-.-. ....+.+.+++.--- T Consensus 1 mtqQQ~~eiqG~~t~~F~GL~~s~S~~~IP~~-~SP~~~N~DV~~~G~V~rR~GT~l~~~Y~in-n~s~~~~s~~irt~L 78 (1012) T protein:vir:94 1 MTQQQATEIQGPFTREFSGLDISNSVGAIPVS-GSPVFHNCDVSDDGAVVRRRGTALVNTYNIN-NASGRAWSDTIRTKL 78 (1012) T ss_pred CCcccccccccccccccccccccccccccccc-CCCceEEeecccCcceeehhhhhhhhhhccc-ccCcceeeeeehhhc Confidence 432 223333334442 2221111111 2234678889999999999999999653311 112345666654332 Q ss_pred -CceEEEEEeCCeEEEEeCCCc----EEEEEccCccccccCCccceEEEEEc---CEEEEecCCeeeeEEeeecccCCC- Q lcl|Aclame:pro 74 -FEQYFVVFTGEDIKVFDLDGK----EYQVRGDRSYVRTANPREDLRMVTVA---DYTFVTNRKVVVQSNDQSVNLPGF- 144 (801) Q Consensus 74 -~~~y~l~~~~~~irv~~~~g~----~~~v~~~~~y~~~~~~~~~l~~~q~~---D~~~i~~~~~~~~~~~~~~~~~~~- 144 (801) .|+|+|--..|-+.+.-.+|+ .+.+...........+-+..-|.-+. |-+.|+.+++||-.+.-......+ T Consensus 79 G~eYfiLs~~~GLL~~~~~~~~AVG~~K~~a~V~~ss~~~V~Pssm~F~~~S~~~~R~LILT~~~~~VQ~~F~E~T~s~T 158 (1012) T protein:vir:94 79 GSEYFILSNDVGLLISLMRDDEAVGMPKEVAVVSKSSIWTVPPSSMCFIPVSAPYDRLLILTPEHPIVQLSFLERTLSFT 158 (1012) T ss_pred cceeEEEecCCceEEEeeecccccccchhhhhhhhhhccccCCcceEEEeccCCCCcEEEEcCCCceEEEEEeeeeeeee Confidence 344455544444444433332 22222211111112222344444433 667888777777655433221111 Q ss_pred -CCCccEEEE--eccCccceeE----------EE-EeCCceEEE-EEeecCCCc-------ccceeeehhhHHHHHHH-h Q lcl|Aclame:pro 145 -KDQGDALIN--VRGGQYGRRL----------SI-EFNGAERAA-VQLPDGSQP-------AHVNEVDGQAIAEKLAA-Q 201 (801) Q Consensus 145 -~~~~~~~~~--v~~g~y~~~y----------~v-~i~~~~ta~-~ttp~~t~~-------~~~~~~~~~~ia~~l~~-~ 201 (801) ...+.+.+. ....+|+++. .+ ..++++.+- ..-|+-+-. ...-+....+|.+++++ + T Consensus 159 ~~t~~~~~V~~~~a~~~~~~~~L~~~~N~sS~~~~~~~~T~~AmT~~NP~~S~~ls~~~V~~qtytltirqi~W~WWAES 238 (1012) T protein:vir:94 159 CTTNHGGGVFSFTAPISVNDTTLWRDTNASSYIVTDAAGTVYAMTQKNPDFSFRLSGSFVVGQTYTLTIRQITWQWWAES 238 (1012) T ss_pred ccCCccceEeecccceeecCeeEEecccccceeEeeccceEEEEEeeCCceeEEEEEEEecCcccceeehhhhhhhhhhh Confidence 111112111 1112222210 00 011111110 000111100 00112233344443322 1 Q ss_pred hhh-------cccceeeee------ccc-------cEEEE--ecCceEEEEeCCCcc-eeEEEEec------CCC--cce Q lcl|Aclame:pro 202 LRN-------NLGNPNNDQ------DPN-------KWRFN--VGPGFIHILAPNNDN-VWGLQTKD------GYA--DQL 250 (801) Q Consensus 202 ~~a-------~~~~~~~~~------~~~-------~~~~~--~~~~~~~i~~~~~~~-~~tit~~d------g~~--~t~ 250 (801) +.. +...+.... +.. ...-+ ..+=.++..+.-+++ .+.-+.+. |++ +.+ T Consensus 239 m~~~G~~~~~~~SRFNV~~~DQ~V~IP~~L~tDiD~v~~~~~~~~l~~~~ss~F~~~~~~~~T~~P~~AD~YG~~~G~~~ 318 (1012) T protein:vir:94 239 MYYEGQDMMQNTSRFNVTSIDQNVKIPDRLITDIDPVYKNSQGLGLFVFWSSRFDSNGWAGPTTSPNTADEYGFSGGGRF 318 (1012) T ss_pred HhhhhhHHHhhhhhcccccccccccchhHHhhhhhhhhhccCCccEEEEEeeeecCceeecCCCCCCCcccccccCCcee Confidence 111 000100000 000 00000 000112222211111 11101000 000 000 Q ss_pred e--eeeee-ecc------cccc------ccccccC---CeEEEEeecCCCCcceEEEEEEcCCeEEE------------- Q lcl|Aclame:pro 251 I--NPVTH-YTQ------SFQK------LPINAPD---GYIVKIVGDTSKTADQYYVRFDLNRKVWV------------- 299 (801) Q Consensus 251 ~--~~~~~-~v~------~~~~------lp~~~~~---g~~v~i~~~~~~~~~~y~v~~~~~~~~W~------------- 299 (801) . ....+ ..+ .+.+ -|....+ -..++..+-.++..++..|.-+..+-+|. T Consensus 319 tpp~~~~~A~L~~aPFF~TFG~~~s~TP~P~~~V~iLR~RELRFN~G~GA~~~~L~V~~D~~~~t~Nnvpfspsnfqt~a 398 (1012) T protein:vir:94 319 TPPSLVPGATLQAAPFFITFGGIYSGTPTPINQVNILRLRELRFNGGTGAKPDDLQVYNDTVEHTWNNVPFSPSNFQTWA 398 (1012) T ss_pred ccccccccceeeccceEEEeccccCCCCCChhheeeeeeeeeeeccCCCCCCcceEEEEcceeeeccccccCccccccee Confidence 0 00000 000 0000 0100000 01122223334444555554443333333 Q ss_pred EEe-ccceeeeEeeccc-------cEEEEeccCC-----eEEEee-----------cccCcccCCCccccC--------C Q lcl|Aclame:pro 300 ETI-GWNTRTHLHYHTM-------PWALVRASDG-----NFDFKY-----------LEWGARTVGDDTTNP--------Y 347 (801) Q Consensus 300 e~~-~~~~~~~~~~~t~-------p~~lv~~~~~-----t~~~~~-----------~~w~~r~~gd~~~np--------~ 347 (801) .+. +-.+.+.+-.+.. ..++...+++ -.-++. --|...+-.+.-+-. . T Consensus 399 tT~~~T~R~~~L~~A~G~~~~~A~Y~A~~GATnnlpanaPL~IS~~sA~s~~~~~R~v~~~~~~T~~~~~~G~Y~r~YGi 478 (1012) T protein:vir:94 399 TTYTATDRVITLMSAVGDRFNNANYFAILGATNNLPANAPLHISCLSASSYLGGSRRVWYRNLPTTGGTLDGCYVRAYGI 478 (1012) T ss_pred eeeeecceeEEEeeeccccccCcceEEEeecccccccCCccccccccceeeeccceeeeeeccccCCceEeeeEEEEEEe Confidence 322 2222222211100 1111111100 000000 012111111100000 0 Q ss_pred c----hhcCCCceEEEEEcCceEEec----CCEEEEEecCC------ccccccc-cccccCCCccEEEEEcCCcceeeee Q lcl|Aclame:pro 348 P----SFTGQTINDIFFFRNRLGFLS----GENIILSRTSK------YFNFFPA-SVSNYSDDDPIDVAVSHDRVSTLKY 412 (801) Q Consensus 348 p----sf~g~~p~~v~f~q~RL~~~~----~~~v~~S~~gd------~~nF~~~-s~~~~~D~D~i~~~~~~~~~~~i~~ 412 (801) - .-.|.+|+-.+.||.||++.+ +..+.+|.+|| ++||+.- ..+.-.|.||+++.++|.-.+.|.. T Consensus 479 G~~~~Y~~~~F~~I~TiY~~RLiL~~~s~~~~~~~~S~~GD~~~~G~~Y~F~QiTD~L~G~~tDPF~L~VtSe~~e~iT~ 558 (1012) T protein:vir:94 479 GKYVDYSKRSFHAIGTIYRDRLILVNPSTATDQLLISEIGDATVPGEFYQFMQITDMLQGVTTDPFTLNVTSEGRERITA 558 (1012) T ss_pred eeeeecCCccccceeeeeeeeeEEeccCCCcceEEEeecCCcccCceeeeeeeeehhhccCcCCceeEEEcccccceeee Confidence 0 012456899999999999997 67899999987 8899865 4577889999999999977888999 Q ss_pred eeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeecccceeh Q lcl|Aclame:pro 413 AVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNA 492 (801) Q Consensus 413 ~v~~~~~L~l~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~ 492 (801) ++..++.|++||..+-|.+.|++.++|..-.++.+|+|+.-+.---|+..-.|+|..+.| ++.+..-- ..++|.+ T Consensus 559 ~~~WQ~~LFV~T~~~T~~~~GGe~~~~s~~~VN~vSt~G~~N~~~VV~T~~~V~Ym~~~G----~F~L~~k~-~~~~Y~A 633 (1012) T protein:vir:94 559 VTGWQKRLFVFTGSNTYSIEGGEQFGESSYAVNLVSTYGAFNQNCVVVTNLTVLYMNKFG----LFDLMNKP-NTDSYGA 633 (1012) T ss_pred eeeeceeEEEEeccceEeeccccccchhHHHHHhHHhhcccCcceEEEeeeEEEEeeccc----eeeccCCc-cCCcchh Confidence 999999999999999999999999999999999999997766666688889999999877 67775544 4589999 Q ss_pred hhHHHHHHHhcCC-------CeEEEEEcCCCCeEEEEEEcC-----CCEEEEEEeeeCCCceEEEEEEeeecCCceEEEE Q lcl|Aclame:pro 493 EDMTAHVPNYIPN-------GVFSISGTTAENFVAILTSGA-----PNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFA 560 (801) Q Consensus 493 ~dls~~~~~~~~g-------~v~~~~~~~~~~~~~~~~~~~-----~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~~~ 560 (801) .+-|..+.++|.. ...+|.+.++.+-+.+..... ...+|+|-++| .+|+..+..|.++.-- T Consensus 634 ~ErSvKIR~~F~~~~~ss~~~~~Wl~~~e~~~~LYi~L~~~~dT~~~S~~~~~N~~~-------DSWs~~~s~~~Fq~YP 706 (1012) T protein:vir:94 634 FERSVKIRGLFQNLAGSSGDNLHWLRYNESSNKLYIGLAAEGDTRTTSRNLMLNFTW-------DSWSTLSSAAPFQMYP 706 (1012) T ss_pred hhhhhhhhhhhhhhccccccceeeeeeccCCceEEEEecCCCcchhhhhhhhhhhhh-------cchhhhhccCCcccch Confidence 9999999999853 122333333333322221111 11233333332 3788888877775332 Q ss_pred -EE-EcCCEEEEEEEeCCCEEEEEEE----EeeccCCCCccccee--------------------------eeeeeEEEe Q lcl|Aclame:pro 561 -AQ-VINSTMTVLMSNEHAVWMGRLH----FTKDSIDLPGEPYRL--------------------------YIDAKRKYT 608 (801) Q Consensus 561 -~~-~~~d~ly~vv~r~~~~~~~~~~----~~~~~~~~~~~~~~~--------------------------~lD~~~~~~ 608 (801) +. +..+...+.+.-+..+++.+.. +...++.....++.+ .+|-.+..+ T Consensus 707 ~V~~~~~~t~L~~i~~~~TV~ML~~~~~~YiDFatirthiypF~~CaG~~~~~Vms~~~GIY~~~~P~tP~I~~~tit~s 786 (1012) T protein:vir:94 707 AVQLFKYMTWLTNINAPLTVAMLATEMPFYIDFATIRTHIYPFTFCAGQRDVSVMSDSRGIYNLPLPVTPGILDYTITAS 786 (1012) T ss_pred hhhhhhhhhhhhhhcCchhhhhhhhccceeeeeehhcccccceeeeccceeeEEEecCCceEEecccccceeeeeEeecc Confidence 11 1122212223333333322110 011111111111111 112111110 Q ss_pred cccc--cccccc---cceeec--cccc-c--CCc----ccCceEEEEe-cCCceeeccccccc----------cccC-cE Q lcl|Aclame:pro 609 IPAG--TYNDDT---YQTSIS--LSTI-Y--GMN----FTKGRVSVVF-PDGKIVEIDQPING----------WSSD-PM 662 (801) Q Consensus 609 ~~~~--~~~~~~---~~t~~~--~~~~-~--gl~----~l~g~~v~v~-~dG~~~~~~~~~~~----------~~~~-~~ 662 (801) ...+ +|...+ +..+.. -++. + .+. .-.++.+.++ .|| .++....... ++.+ .. T Consensus 787 s~~~~k~Yq~~T~~~GT~tLt~~~~~~~~~~~l~LL~~~~~~~~~a~V~~~~-~~~~TT~~TV~~N~~~~lQ~T~~~GS~ 865 (1012) T protein:vir:94 787 SKAGAKTYQRNTASAGTETLTLRNPMMDYADTLELLGGNVNASQFAMVMSNG-FEPYTTYPTVTYNGVAPLQWTVTGGSG 865 (1012) T ss_pred chhhhheeccccccccceeeeecChhhhcCcEEEEecCCCCccEEEEEeecc-cccccccceEEecceeeeeEEEecCCc Confidence 0000 000000 000000 0000 0 000 0122232222 222 1111111111 1111 12 Q ss_pred EEEcCCcc-CceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeee-EEEEEEEEEeecc--eeEEEEeCCCCcceeeee Q lcl|Aclame:pro 663 LRLDGNQE-GQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGR-LQLRRAWVNYEDS--GAFIIRVNNLSREFIYTM 738 (801) Q Consensus 663 ~~l~~~~~-~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~r-l~l~~~~v~~~~t--g~~~~~v~~~~~~~~~~~ 738 (801) +....-.+ ...+.+|.-|.+.+..+-+.+. . -+| ++|.++++-|.-+ ..++.++........+.. T Consensus 866 L~~~~~LsqN~~~~~G~~Y~S~Y~SP~F~L~----S-------L~~LKr~K~~~L~~Dttvtsqlkynltsgfsqvsvln 934 (1012) T protein:vir:94 866 LNNRPILSQNNNCIMGMIYPSVYASPIFDLE----S-------LGRLKRLKKLHLQMDTTVTSQLKYNLTSGFSQVSVLN 934 (1012) T ss_pred cccccccccCceEEEeecchhhhcchhhhhh----h-------hhhhhheeeeeEEeeeeeeeeeeeehhcccceeeeec Confidence 22111111 3468899999998887555442 1 122 2566666655443 333333222211110000 Q ss_pred ccce-eccccccCCcccccc------------ceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEec--c-ccC Q lcl|Aclame:pro 739 AGAR-LGSDNLRVGGSNIGT------------GQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLR--R-SSG 800 (801) Q Consensus 739 ~~~~-~~~~~~~~~~~~~~t------------g~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~--r-~rr 800 (801) .... +-+.++..=.|..++ -...+|+.|..-+.++.|.+-..-.+.+-+.+++.+=-. | .|| T Consensus 935 tawvavvsnynenivpavvsyqvgnsyeirrvvelsiplqgygcdyqfyiasvgaeafklaayefdiqpqrdkryvrr 1012 (1012) T protein:vir:94 935 TAWVAVVSNYNENIVPAVVSYQVGNSYEIRRVVELSIPLQGYGCDYQFYIASVGAEAFKLAAYEFDIQPQRDKRYVRR 1012 (1012) T ss_pred ceeeeeeeccCccccceeeeeecCCceeeeEEEEEeecccccccceeEeeeeccccceeeeeeeeccccchhhhhccC Confidence 0000 001111110111111 135678889988999999999999999999988765322 2 223 No 27 >protein:vir:80177 Length: 1027 # NCBI annotation: tail tubular protein B # Family: family:all:12083 # MgeID: mge:1878 # MgeName: Pf-WMP3 # Cross-refs: genbank:acc:YP_001285795;genbank:gi:148747829;genbank:GeneID:5220453 Probab=99.62 E-value=4e-15 Score=99.51 Aligned_cols=750 Identities=15% Similarity=0.137 Sum_probs=296.3 Q ss_pred Cce----ee------eechhhhccc--ccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEE Q lcl|Aclame:pro 1 MAL----IS------QSIKNLKGGI--SQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHL 68 (801) Q Consensus 1 Ma~----v~------~~~~~~~~Gv--sqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~ 68 (801) |-. -+ +...+=.+|+ +.-+=..-|. +--...|+=.+..|-+.||.|+..+-.-.++ .+.+.++ T Consensus 1 mvnsferrtQQ~~dlG~~s~~F~GL~~t~S~~~IP~~-~SP~~~N~DV~~~G~V~kR~GT~i~~~Y~~t----~~~~t~~ 75 (1027) T protein:vir:80 1 MVNSFERRTQQGDDLGIRSSNFGGLNTTASPLNIPYE-DSPNLLNVDVDVSGNVSKRQGTEILLKYANT----TPVYTFP 75 (1027) T ss_pred CCcchhhhhcccccccccccccccccccccccccccc-CCCceEEeecccCcceeehhhhhhhhhhccC----Cceeeee Confidence 210 00 1122223342 2111111111 1224678889999999999999999665432 3456666 Q ss_pred EEeCCCceEEEEEeCCeEEEEeCCCcE----EEEEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCC Q lcl|Aclame:pro 69 INRDEFEQYFVVFTGEDIKVFDLDGKE----YQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGF 144 (801) Q Consensus 69 f~~~~~~~y~l~~~~~~irv~~~~g~~----~~v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~ 144 (801) +.---.-.|+|--..|-+.+.-.+|+. +.+...........+---+-.--.-|-+.|+.+++||-.+.-...+..+ T Consensus 76 vks~LG~dYvLt~~~GLL~~~~~~~~AVG~~K~~s~V~~aa~~~V~P~F~~~S~~~~R~LILT~~~~~VQ~~F~E~T~t~ 155 (1027) T protein:vir:80 76 VKSVLGYDYVLTKSGGLLEVAGVIGKAVGAYKSFSNVFSAAAANVKPYFTLLSDVEPRVLILTGTNTPVQVKFVEQTFTT 155 (1027) T ss_pred ehhhccceeeEecCCceEEEeeecccccccchhhhhhhhhhhcccCceeEEccCCCCcEEEEcCCCceEEEEEeeeeeee Confidence 544444456555444444444333322 1111111100000000000111123567777777766554432221111 Q ss_pred --CCCccEEEE--eccCccceeEEE-----------EeCCceEEEEE--eecCCCcccceeeeh--hhHHHHHHH---hh Q lcl|Aclame:pro 145 --KDQGDALIN--VRGGQYGRRLSI-----------EFNGAERAAVQ--LPDGSQPAHVNEVDG--QAIAEKLAA---QL 202 (801) Q Consensus 145 --~~~~~~~~~--v~~g~y~~~y~v-----------~i~~~~ta~~t--tp~~t~~~~~~~~~~--~~ia~~l~~---~~ 202 (801) ...+.+.+. ....+|+++.-- ..++++.+-.. +|+-+-.-.-+.+-. ++-|+.|.= .. T Consensus 156 T~~s~~~~~V~~~~s~~~~~~~~L~~~~N~tS~~~~~~~~T~~AlT~~NlP~~S~~mt~~~V~~~W~WWAESl~~~G~~~ 235 (1027) T protein:vir:80 156 TSGSPTTTVVIPNASRFQYDTPILYMNRNFTSGATYSYNSTTRALTISNLPSWSGSMTFDLVLPVWSWWAESLRWFGDRF 235 (1027) T ss_pred eccCCccceEeecccceeecCeeEEecccccceeEeeccceEEEEEeccCCcceeEEEEeEEecchhhhhhHHhhhhhHH Confidence 111222221 111223222100 01111111100 122111100111111 111211100 00 Q ss_pred hhcccceeee------eccc-------cEE--EEecCceEEEEeCCCcc-eeEEEEec------CCCc-ceeee------ Q lcl|Aclame:pro 203 RNNLGNPNND------QDPN-------KWR--FNVGPGFIHILAPNNDN-VWGLQTKD------GYAD-QLINP------ 253 (801) Q Consensus 203 ~a~~~~~~~~------~~~~-------~~~--~~~~~~~~~i~~~~~~~-~~tit~~d------g~~~-t~~~~------ 253 (801) -.+...+... .+.. ... ....+=.++..+.-+++ .+.-+.+. |+++ -.... T Consensus 236 ~~~~SRFNV~~~DQ~V~IP~~L~sDlD~i~~~~~~~~m~~~~ta~F~~~~~~~~T~~P~~AD~YG~~~G~~~~~~~~A~L 315 (1027) T protein:vir:80 236 YDAVSRFNVNKADQSVAIPAALRSDLDTIQGTYGRYPMLLYKTATFNDTYTFSNTGQPANADSYGWGDGSVYNVGASAYL 315 (1027) T ss_pred HhhhhhcccccccccccchhHHhhhhhhhhhccCCccEEEEEeeeecCceeecCCCCCCCcccccccCCceEeeccccee Confidence 0000000000 0000 000 00000011111111111 00000000 0000 00000 Q ss_pred -------eeeeccccccccccccC---CeEEEEeecCCCCcceEEEEEEcCCeEEE--EE-eccceeeeEeec------- Q lcl|Aclame:pro 254 -------VTHYTQSFQKLPINAPD---GYIVKIVGDTSKTADQYYVRFDLNRKVWV--ET-IGWNTRTHLHYH------- 313 (801) Q Consensus 254 -------~~~~v~~~~~lp~~~~~---g~~v~i~~~~~~~~~~y~v~~~~~~~~W~--e~-~~~~~~~~~~~~------- 313 (801) ..+..-+..--|....+ -..++...-.++..++..|.-+...-+|. .+ ++-.+.+.+-.+ T Consensus 316 ~~sPFF~TFG~~~t~TP~P~~~V~lLR~RELRFN~G~GA~~~~L~V~~D~~~~s~N~ssT~~~T~R~~~L~~A~G~~~~~ 395 (1027) T protein:vir:80 316 NTSPFFATFGDTRTPTPQPPETVHLLRQRELRFNYGNGATGANLRVTVDGTALSANYSSTVAGTNRAYALYKADGTLCTS 395 (1027) T ss_pred eccceEEEeccccCCCCCchhheeeeeeeeeeeccCCCCCCcceEEEEcceeeeeeeeeeeeecceeEEEeeeccccccc Confidence 00000000000111000 01122223334444555554443333332 22 122222222111 Q ss_pred -c-c----------cEEE-----EeccCCeEEEeecccCcccCCCccccC------------CchhcCCCceEEEEEcCc Q lcl|Aclame:pro 314 -T-M----------PWAL-----VRASDGNFDFKYLEWGARTVGDDTTNP------------YPSFTGQTINDIFFFRNR 364 (801) Q Consensus 314 -t-~----------p~~l-----v~~~~~t~~~~~~~w~~r~~gd~~~np------------~psf~g~~p~~v~f~q~R 364 (801) . + |.-| +...++. ...-|...+-.|.-.-. +-.-.|.+|+-.+.||.| T Consensus 396 A~dlayY~A~~GATPL~IS~~aA~t~~~~~---R~yi~~~~~~T~~~~~~G~Y~k~YGlG~~~~Y~~~~F~~I~TvY~~R 472 (1027) T protein:vir:80 396 ASDLAYYIAFTGATPLGISPTAAVTITNVD---RTYIGSAATQTDNAYVQGGYFKVYGLGLWANYGTGQFPRIATVYQSR 472 (1027) T ss_pred cccceeeeeeeccccccccccceeeeecCc---eeeeeeeccccCCceEeeeEEEEEEeeeeeecCCccccceeeeeeee Confidence 0 0 1111 0001110 00012111111100000 000124679999999999 Q ss_pred eEEec----CCEEEEEecCC------cccccccc-ccccCCCccEEEEEcCCc-ceeeeeeeecCCcEEEEecCcEEEEe Q lcl|Aclame:pro 365 LGFLS----GENIILSRTSK------YFNFFPAS-VSNYSDDDPIDVAVSHDR-VSTLKYAVPFSEELLLWSDQAQFVLT 432 (801) Q Consensus 365 L~~~~----~~~v~~S~~gd------~~nF~~~s-~~~~~D~D~i~~~~~~~~-~~~i~~~v~~~~~L~l~t~~~q~~~~ 432 (801) |++.+ |..|.+|.+|| ++||+.-+ .+.-.|.||+++.++|.| .+.|..++..++.|++||..+-|.+. T Consensus 473 LvL~~~t~~~~~~~~S~~GD~~~~G~~Y~F~QvTD~L~G~~sDPF~L~VsSsq~~d~vT~~~~WQ~~LFV~T~~~T~~~~ 552 (1027) T protein:vir:80 473 LVLGGFTNDPTRVVFSATGDTVEGGVKYNFFQVTDDLDGLDSDPFDLVVSSSQADDYVTGLVEWQSSLFVLTRRATFRAN 552 (1027) T ss_pred eEEeccCCCcceEEEeecCCcccCceeeeeeeeehhhccCcCCceeEEEecccccceeeeeeeeceeEEEEecceeEEee Confidence 99997 67899999987 88998654 577889999999999866 45588999999999999999999999 Q ss_pred CCcc-ccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCC------ Q lcl|Aclame:pro 433 ASDI-LSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN------ 505 (801) Q Consensus 433 ~~~~-lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g------ 505 (801) |++. ++|..-.++.+|+|+.-+.---|+....|+|..+.| ++.+..-- ..++|.+.+-|..+.++|.. T Consensus 553 GGd~t~~~a~~~VN~iSs~G~~N~~~VV~T~~~V~Yl~~~G----~F~L~~r~-~~~~Y~A~EkSiKIR~~F~~~~~ta~ 627 (1027) T protein:vir:80 553 GGDATISPARRFVNYISSLGLVNPFSVVRTDTAVFYLSDSG----VFNLTPRV-EDGEYQAIEKSIKIRKVFGKTTSTAV 627 (1027) T ss_pred cCccccchhHHHHHHHHhhcccCcceEEEeeeEEEEeeccc----eeeccCCc-cCCcchhhhhhhhhhhhhhhhccccc Confidence 9875 999999999999997766666788899999999877 67776554 45899999999999999854 Q ss_pred -CeEEEEEcCCCCeEEEEEEcC-----CCEEEEEEeeeCCCceEEEEEEeeecCCceEEEEE----E-EcCCEEEEEEEe Q lcl|Aclame:pro 506 -GVFSISGTTAENFVAILTSGA-----PNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAA----Q-VINSTMTVLMSN 574 (801) Q Consensus 506 -~v~~~~~~~~~~~~~~~~~~~-----~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~~~~----~-~~~d~ly~vv~r 574 (801) ...+|.+.++.+-+.+..... ...+|+|-++| .+|+..+..|.++.-.. . +..+...+.+.. T Consensus 628 ~~~~Wm~~~q~~~~LYv~L~~~~eT~~~S~~~~~N~~~-------DSWt~~~t~~~Fk~YtghP~V~~~~~~s~L~~v~~ 700 (1027) T protein:vir:80 628 SSAAWMSFDQNRKVLYVALPRGSETTVASALYVYNTFR-------DSWTQYDTLGGFKTYTGHPYVDTVLGDSFLLMVAY 700 (1027) T ss_pred cceeeeeeccCCceEEEEecCCCcchhhhhhhhhhhhh-------cchhhhhcccCcccccCCchhhhhhhhhhhhhhcC Confidence 122333333333322221111 11233333332 37888888887764421 1 123333334455 Q ss_pred CCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccc----------cccCCcccCceEEEEecC Q lcl|Aclame:pro 575 EHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLS----------TIYGMNFTKGRVSVVFPD 644 (801) Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~----------~~~gl~~l~g~~v~v~~d 644 (801) +..+++.+.... .-+| +|--| -+.++.-.+.+.... ..++| .+++-..+.-++...-.| T Consensus 701 ~~TV~ML~~~~~-~YvD-------FF~~C-G~~~~~Vlt~~~GIY--~~~~P~wnsP~I~~~svs~tt~~~~q~Ye~~T~ 769 (1027) T protein:vir:80 701 GGTVCMLKLYGS-RYVD-------FFNKC-GSFTGNVLTANSGIY--TWTAPFWNSPVISNISVSGTTTLAVQRYELPTD 769 (1027) T ss_pred chhhhhhhhhcc-hhhh-------hhhhc-ccceeeEEecCCcee--EeecccccCCeeeEEEeeccchhhhheeccccc Confidence 555554332110 0011 11111 111111111111111 11111 122333343444444444 Q ss_pred Cceeeccc--cccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEeeccee Q lcl|Aclame:pro 645 GKIVEIDQ--PINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGA 722 (801) Q Consensus 645 G~~~~~~~--~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~tg~ 722 (801) -.+.+... +....+.|..+++.-++. +|--.+ ++-...++++..+ .|-|+-+++..-|. T Consensus 770 ~~vvpydnvedlsiyvnGT~Ls~~~~~~--------~~~~~i-----~LL~~~~~~~~~s------~Vprcpvnvsy~~~ 830 (1027) T protein:vir:80 770 LQVVPYDNVEDLSIYVNGTRLSFGTDWV--------KQGKAI-----YLLSDPGDGKTVS------IVPRCPVNVSYQGD 830 (1027) T ss_pred cccccccccccceeeecceeEeecCchh--------hcCCEE-----EEecCCCCcceEE------EEeccccccccccc Confidence 44333221 112233444444432221 111112 2222333333333 35665555544332 Q ss_pred EEEEeCCCCcceeeeeccceeccccccCCc-----cccccceEEE----------EEe--------eecceeEEEEEECC Q lcl|Aclame:pro 723 FIIRVNNLSREFIYTMAGARLGSDNLRVGG-----SNIGTGQYRF----------PVV--------GNAQTNTVTIESDA 779 (801) Q Consensus 723 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~tg~~~v----------p~~--------~~~~~~~v~I~~~~ 779 (801) .... ..+....++..-..+.+.++...|. |-+....+.+ ||. ++-...-+.+-..+ T Consensus 831 ~~~~-~TT~~TV~~N~~~~iQ~Tdy~~~GS~L~~~~~LtN~~~~~G~~Y~S~Y~SP~F~L~SL~~LKk~K~~~L~~Dned 909 (1027) T protein:vir:80 831 VTFD-ETTAQTVWVNNLLQIQGTDYTLSGSTLTFTDTLTNAVVEVGNAYISYYQSPMFLLGSLSNLKKVKHVYLYFDNED 909 (1027) T ss_pred cccc-ccccceEEecceeeeccceeeeccCccccccccccceEEEeecchhhhcchhhhhhhhhhhhheeeeEEEEcCCc Confidence 2211 1112222222111222222221111 1111111111 110 01112222233333 Q ss_pred CCCEEEEEEEEEEEEecc-----ccCC Q lcl|Aclame:pro 780 STPLNIIGCGWEGNYLRR-----SSGI 801 (801) Q Consensus 780 P~P~tvlai~weg~y~~r-----~rrv 801 (801) -||.--++=--.|+=..- .-|- T Consensus 910 vlpvytigdlasgqdvddlvgkwktra 936 (1027) T protein:vir:80 910 VLPVYTIGDLASGQDVDDLVGKWKTRA 936 (1027) T ss_pred ceeeeeeccccCCCchhHhhhhhcccc Confidence 333322111111110000 0000 No 28 >protein:vir:2625 Length: 715 # NCBI annotation: gp27 # Family: family:all:5234 # MgeID: mge:55 # MgeName: SIO1 # Cross-refs: genbank:acc:NP_064766;genbank:gi:9964636;genbank:GeneID:1263056 Probab=99.15 E-value=1.1e-09 Score=69.61 Aligned_cols=635 Identities=12% Similarity=0.123 Sum_probs=287.3 Q ss_pred Cceee--eechhhhcccccCchhHHhh-hhhhhhhcceeeecCCceeCCccee-----eeeecCCCCcccceEE--EEE- Q lcl|Aclame:pro 1 MALIS--QSIKNLKGGISQQPDILRFT-EQGSVQINGWSSESEGIQKRPPMIH-----LKTLGTAGYVGAQPYV--HLI- 69 (801) Q Consensus 1 Ma~v~--~~~~~~~~Gvsqq~d~~r~~-~q~~~~~N~~~~p~gGl~rRpGt~~-----v~~l~~~~~~~~~~~~--~~f- 69 (801) ||+-. -....|++|+=--.-+.-|| +..-.-+||...-.|--+||-|.-| +....-. ....+ +.+ T Consensus 1 m~~~~~~~~vNtFv~GliTEas~ltfpqnasiDe~N~~l~rdG~r~RR~g~~~E~~~vls~~~vp----~galv~~~~W~ 76 (715) T protein:vir:26 1 MPQSLTQRTVNTFIKGLITEASELTFPENASVDELNCSLGRDGTRRRRKAVTLEDNHVLSDVVVP----EGALVQTLDWY 76 (715) T ss_pred CCcccchhHHhhhhhheeeccccccCCccceeeeeeeeecCCCcchhhccceeecceEEEEEeec----Cceeeeeechh Confidence 99733 45677999943333333343 3444578999999998899988744 3322111 11111 111 Q ss_pred -EeCCCceEEEEEeCC-eEEEEeCCCcE-------EEEEccCccc-cccCCcc-ceEEEEEcCEEEEecCCeeeeEEeee Q lcl|Aclame:pro 70 -NRDEFEQYFVVFTGE-DIKVFDLDGKE-------YQVRGDRSYV-RTANPRE-DLRMVTVADYTFVTNRKVVVQSNDQS 138 (801) Q Consensus 70 -~~~~~~~y~l~~~~~-~irv~~~~g~~-------~~v~~~~~y~-~~~~~~~-~l~~~q~~D~~~i~~~~~~~~~~~~~ 138 (801) .-+.-...|+++..| .+.+|.+.+.. .++....-+. .-.-|.+ .++++.+..++.|+||..-|..+.-. T Consensus 77 na~G~v~~~~livqvg~~l~f~q~t~~pLs~~n~~~svdl~~~~~~vn~SPsh~~v~v~~~~G~livanp~i~~~~~~~d 156 (715) T protein:vir:26 77 NVAGQVNLEFLVVQVNNILYFYEKSTDPLSANKYSGSVDLNTHSASNNLSPSEERVQVTSLNGYLIVASPAINTFYLGFN 156 (715) T ss_pred hcccccCcEEEEEEeccEEEEEeccCCccccCceeEEeeecceecccccccceeEEEEEEeeeEEEEecCCccEEEEEec Confidence 112335567777654 46777665521 2232211110 0011333 57888899999999999888765532 Q ss_pred cccCCCCCCccEEEEeccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccE Q lcl|Aclame:pro 139 VNLPGFKDQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKW 218 (801) Q Consensus 139 ~~~~~~~~~~~~~~~v~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~ 218 (801) +....+.+ --+-+|.-.|. .+|.. +.+.+ .+...... +.++++.+..+.........| T Consensus 157 ~~t~s~t~---~~ll~r~r~f~------~qg~d---~~~g~-~y~~~gt~---------~tn~~iynlyN~gw~~p~gt~ 214 (715) T protein:vir:26 157 TSTEAFTA---TSISFKERDFE------WQGSD---VDVTS-LYFGEGTS---------VSNQRIYDTYNVGWVGPKGSA 214 (715) T ss_pred CCcceeEe---eEEEEEeeehe------eeccc---ccccc-ccccCCcc---------cCchhheecccceeecceeEE Confidence 21111100 00111111111 11111 00000 00000000 111222222222222111122 Q ss_pred EEEecCceEEEEeCCCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEE Q lcl|Aclame:pro 219 RFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVW 298 (801) Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W 298 (801) ..+-.+.++ ..+.....| +.++ .++. -...-.| T Consensus 215 ~~N~~~~yi--Vypa~s~~~------------------------------~S~k-------d~n~--------afsk~ad 247 (715) T protein:vir:26 215 ALNTYGSYI--VYPALTHPW------------------------------YSGK-------DANG--------AFNKADW 247 (715) T ss_pred EEcCCCCce--Eeccccccc------------------------------CCCc-------cccc--------ccChhhc Confidence 222211111 111100000 0000 0000 0000112 Q ss_pred EEEeccceeeeEeeccccEEEEe-ccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEec------CC Q lcl|Aclame:pro 299 VETIGWNTRTHLHYHTMPWALVR-ASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS------GE 371 (801) Q Consensus 299 ~e~~~~~~~~~~~~~t~p~~lv~-~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~------~~ 371 (801) +|.-- |. ......|.+.. .+.+.-..+ .+. -.+.|+|++.|.+|.+|++ +. T Consensus 248 ~ei~t-Gt----~~~~~G~yi~D~~~~g~~~le----------eev-------~k~R~rsv~~yaGrV~yagiD~dkng~ 305 (715) T protein:vir:26 248 LEIYT-GS----SLASNGHYVLDVFNKARTGLT----------TEV-------ETGRFRSVAAYAGRVFYAGIDSAKNGG 305 (715) T ss_pred ccccc-cc----ccccCceEEEeeeecCCccch----------hhh-------hcCCCcceeeecceEEEeecccccCCC Confidence 21100 00 00000011100 000000000 000 0356778999999999995 44 Q ss_pred EEEEEecCC----ccc----cccccc--cccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCc-ccccc Q lcl|Aclame:pro 372 NIILSRTSK----YFN----FFPASV--SNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASD-ILSSR 440 (801) Q Consensus 372 ~v~~S~~gd----~~n----F~~~s~--~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~-~lTP~ 440 (801) .|.+||.=| --| =++++- ..+.|+|...+.+.+. -.|.-|+.++..|+||...+-|+|.|.+ .+|.+ T Consensus 306 rilfSqLv~s~~di~nCyQd~DPTsee~~dLidTDGg~iri~ga--h~ii~Lv~f~~sLlvf~~NGVWAi~G~d~g~tAT 383 (715) T protein:vir:26 306 KVYFSRLTERMSDVGNCYQVNDPTSEVLSDLLDTDGGVVRIPDA--HNIRKLHVLGASLLVFAENGVWAVAGVDNVFRAT 383 (715) T ss_pred eEEEehhhcchhhcccccccCCCchhhhhhhhhcCCCEEEecCC--CCceeEEEecceEEEEEecceEEEeccCCceeee Confidence 899998643 333 333331 3456788888888764 3466789999999999999999997754 79999 Q ss_pred ceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeecccceehhhHH-HHHHHhcCC---CeEE---EEEc Q lcl|Aclame:pro 441 SVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMT-AHVPNYIPN---GVFS---ISGT 513 (801) Q Consensus 441 ~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls-~~~~~~~~g---~v~~---~~~~ 513 (801) +..+..+++.+|++.=.-|++|+.++|-.+.| |+...+.+ ...-+.++.|| ..|.+|... ..+. -.+- T Consensus 384 dY~ltKIs~vg~sspnSvVvv~~~i~~WsdtG----Iyal~~Nd-~fn~~tAqNLTekTIq~~~~~I~~dk~knVtg~fd 458 (715) T protein:vir:26 384 EYAITRISDVGLSNENSFVVADGIPIWWGKTG----IYAVQQSE-NLNTPTAQNLSLSTIQTLWNNISNAKKAQVTVEYD 458 (715) T ss_pred eeEEEEeeeeccCCCccEEEecceEEEeeCCc----EEEEEecc-ccCcchhhccchHHHHHHHhhcchhhhcceEEEEE Confidence 99999999999998888899999999999987 67766554 24678899999 788887654 1111 1345 Q ss_pred CCCCeEEEEEEcCCCEEEEEEeeeCC-CceEEEEEEeeecC---CceEE-EEE-E---------------------EcCC Q lcl|Aclame:pro 514 TAENFVAILTSGAPNRVYIYKFLYID-EEIRQQSWSHWDFG---DNVTV-FAA-Q---------------------VINS 566 (801) Q Consensus 514 ~~~~~~~~~~~~~~~~l~~~ty~~~~-~e~~~~aW~~w~~~---g~~~~-~~~-~---------------------~~~d 566 (801) .-++.+.|+..+ .+++.-|+|-+.- =.-...|+-+|..+ |..-+ ++. . .+++ T Consensus 459 ~~e~rVyW~yPn-~dt~vdykyd~vLV~dLalgaFYp~~v~~~a~~~~~~ig~~~~~~~~~~~t~~~vv~~~~v~~~g~~ 537 (715) T protein:vir:26 459 KINQRVFWFYPD-NDESVDYKYNNILVMDLALQAFYPWRVEDEASSTSYIIGTSYYGGLGSTSTETQVVNGADVVVNGSD 537 (715) T ss_pred ccCCEEEEEEcC-CceeeceeecCeEEEEecccccccccccccccccceeeeeeeeCCcccccchhheeccceEEEeccc Confidence 556777777654 3456555552100 00112355555543 21111 110 0 0111 Q ss_pred EEEEEEEeCCC-EEEEEEEEeecc----CCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCceEEEE Q lcl|Aclame:pro 567 TMTVLMSNEHA-VWMGRLHFTKDS----IDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVV 641 (801) Q Consensus 567 ~ly~vv~r~~~-~~~~~~~~~~~~----~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~v 641 (801) .+..+..|.-- .-.+...+..+. +.....+...|||.+. ...+ + +++ .-. T Consensus 538 ~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~dw~s-~d~~--~-------------------~~~---~gy 592 (715) T protein:vir:26 538 NVVATLYRDYLEGDSEIKLLVRDGTTGKMTFATFRGDTYLDWGS-ADYK--S-------------------FAE---AGY 592 (715) T ss_pred eEEEEeecccccccceEEEEEEcCCceeEEEecccCceeeeccc-cchh--h-------------------HHH---hhh Confidence 11111111100 000000000000 0111222234455322 0000 0 000 000 Q ss_pred ecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEeecce Q lcl|Aclame:pro 642 FPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSG 721 (801) Q Consensus 642 ~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~tg 721 (801) .+.|.+..+.- .+.-+.| ++++- .=++... .|=.-....+- +-....+..+++ T Consensus 593 ~~~gd~~~~k~----------------~pyvt~~------~~~te-dg~v~~~--~g~~p~n~sSc--lm~~sw~ws~s~ 645 (715) T protein:vir:26 593 DFMGDITTFKN----------------APYVTTY------MRVTE-DGYVASG--AGYEFINPSSC--LMSVSWNLSKSG 645 (715) T ss_pred hhcccceeeec----------------CceEEEE------EEEec-ccceecc--CCccccCCcce--EEEEEeeeccCC Confidence 11111111100 0000000 00000 0011000 00000011111 111122222221 Q ss_pred eEEEEeCCCCcceeeeeccceeccccccCCccccccce-EEEEEeeecceeEEEEEECCCCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 722 AFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQ-YRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) Q Consensus 722 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~-~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r~ 798 (801) .-..+.|.+..+++-.+.+....--..+.+ -...++|..+..+++|++..--.++|++.+.-|-=|+.+ T Consensus 646 --------st~~eaYk~~~~~~~~p~~~s~~~yp~~~VvTKsriRG~Gr~~~~rf~s~~gKdlhl~Gysilg~~~~~~ 715 (715) T protein:vir:26 646 --------STPREIYKLKDVPVVNPNDLSSINYPTDTVVTKSKVRGRGRSMKFRFESVAGKDFHLVGYEVIGAKNNSY 715 (715) T ss_pred --------CChhhhheecceeeeCCCccccccCCcceeEeeeeeeccceEEEEEEEecCCcceEEEeEEEEecccCCC Confidence 111234444444443333333211111112 234578999999999999999999999999999998888 No 29 >protein:vir:95475 Length: 771 # NCBI annotation: hypothetical protein ORF038 # Family: family:all:5234 # MgeID: mge:1570 # MgeName: PA11 # Cross-refs: genbank:acc:YP_001294631;genbank:gi:149408197;genbank:GeneID:5237042 Probab=98.26 E-value=2e-06 Score=51.89 Aligned_cols=654 Identities=13% Similarity=0.106 Sum_probs=281.6 Q ss_pred Cceee--eechhhhcccccCchhHHhh-hhhhhhhcceeeecCCceeCCcceee-------eeecCCCCcccceEE---- Q lcl|Aclame:pro 1 MALIS--QSIKNLKGGISQQPDILRFT-EQGSVQINGWSSESEGIQKRPPMIHL-------KTLGTAGYVGAQPYV---- 66 (801) Q Consensus 1 Ma~v~--~~~~~~~~Gvsqq~d~~r~~-~q~~~~~N~~~~p~gGl~rRpGt~~v-------~~l~~~~~~~~~~~~---- 66 (801) ||+-+ -....|++|+=--.-+.-|| +..-.-+||...-.|--+||-|.-|- ....- +++.++ T Consensus 1 m~~~~~~~~vNtFv~GliTEas~ltfpqnasiDe~N~~l~rdG~r~RR~g~~~E~~~~~vls~~~v----pa~g~~~v~~ 76 (771) T protein:vir:95 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLV----PADGTIAVTS 76 (771) T ss_pred CCcccchhHHhhhhhheeeccccccCCccceeeeeeeeecCCCcchhhceeeeecCCceEEEEEEe----cccceEEeee Confidence 99843 45677999943333333343 34446789999999999999887543 22211 112222 Q ss_pred EEE--EeCCCceEEEEEeCCe-EEEEeCCCcEEEEEccCcccccc---CCccceEEEEEcCEEEEecCCeeeeEEeeecc Q lcl|Aclame:pro 67 HLI--NRDEFEQYFVVFTGED-IKVFDLDGKEYQVRGDRSYVRTA---NPREDLRMVTVADYTFVTNRKVVVQSNDQSVN 140 (801) Q Consensus 67 ~~f--~~~~~~~y~l~~~~~~-irv~~~~g~~~~v~~~~~y~~~~---~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~ 140 (801) +.+ .-+.-...|+++..|+ +.+|.+.|..+ +....+..+. -|.+.|++.-+..++.|+||..-|..+.-.+. T Consensus 77 ~~W~na~G~v~~~~livqvg~~l~f~q~t~~pL--s~~n~~~~a~~nlSPsh~isv~v~~G~livanp~i~~~~~~~d~~ 154 (771) T protein:vir:95 77 HNWENAGGEVGRWISLVQVGTELKFFQTTGETL--SEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSG 154 (771) T ss_pred echhhcccccCcEEEEEEeccEEEEEecCCCcc--cccceeeeecceeccceeEEEEEeeeEEEEecCCccEEEEEecCC Confidence 111 1123456677776544 67777665322 1222222222 24456888889999999999988876543221 Q ss_pred cCCCCCCccEEEEeccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEE Q lcl|Aclame:pro 141 LPGFKDQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRF 220 (801) Q Consensus 141 ~~~~~~~~~~~~~v~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~ 220 (801) ...+.+.. +-+|.- |.-+ -..+|...- .+.....-... +.++++.+..+. +|.. T Consensus 155 t~s~t~~~---ll~r~r-f~~q--~~~~G~d~~--------~~~~~~~~gt~-----~tn~~iynlyN~-------gw~~ 208 (771) T protein:vir:95 155 SVSVTTKR---LLVRDL-FGVQ--DIVNGVDLR--------QGNDIATRPTV-----QTNAHIYNLRNQ-------TFGV 208 (771) T ss_pred cceeEeee---eeeeeh-hhcc--cccccccee--------cccccccCCcc-----cCchhheecccc-------ceec Confidence 11110000 001100 0000 000111000 00000000000 011111111111 1110 Q ss_pred EecCceEEEEeCCCcceeEEEEecCCCcceee-eeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEE Q lcl|Aclame:pro 221 NVGPGFIHILAPNNDNVWGLQTKDGYADQLIN-PVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWV 299 (801) Q Consensus 221 ~~~~~~~~i~~~~~~~~~tit~~dg~~~t~~~-~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~ 299 (801) .-....+++.-. .++.. .++....| +..|.|..-+ +.-.|+ T Consensus 209 --------------------pk~~~~snt~~~~iV~~y----~a~~g~~p------------S~sd~~N~a~--~k~~~~ 250 (771) T protein:vir:95 209 --------------------PRVTWHSNEPSDPIVTFR----SAASGKFP------------SNSDSVNLAL--SKRADV 250 (771) T ss_pred --------------------cccccccCCccccceEee----eccCCCCc------------CCceeecccc--chhhcc Confidence 000011111100 00000 00111111 1111111110 011233 Q ss_pred EEeccc-----eeeeEeeccccEEEEeccCCeEEEeecccCcc-cC-CCccccCCchhc-----------CCCceEEEEE Q lcl|Aclame:pro 300 ETIGWN-----TRTHLHYHTMPWALVRASDGNFDFKYLEWGAR-TV-GDDTTNPYPSFT-----------GQTINDIFFF 361 (801) Q Consensus 300 e~~~~~-----~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~r-~~-gd~~~np~psf~-----------g~~p~~v~f~ 361 (801) |...-. .......+| .-.+.|-|-.....-... +. -.+.+.|+||.. -+.-+.|+=| T Consensus 251 Ei~t~~~f~~~~~~~~~~Gt-----~~~~~G~yi~da~~~g~~~Lt~~ve~~gr~~s~~~~~~~l~~~~t~~~~~~vaey 325 (771) T protein:vir:95 251 EPSTTDRFRAEDIVLNPIGT-----YETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGASVVCEY 325 (771) T ss_pred ceeeecccchhhhhhcccCc-----ccccCcceeeehhhhcccccceeeeccccchhhhccccccccccCCCCceeEEee Confidence 322100 000000000 000111111110000000 00 001234444422 1345678999 Q ss_pred cCceEEec-----------C----CEEEEEecCC--------ccccccccc--cccCCCccEEEEEcCCcceeeeeeeec Q lcl|Aclame:pro 362 RNRLGFLS-----------G----ENIILSRTSK--------YFNFFPASV--SNYSDDDPIDVAVSHDRVSTLKYAVPF 416 (801) Q Consensus 362 q~RL~~~~-----------~----~~v~~S~~gd--------~~nF~~~s~--~~~~D~D~i~~~~~~~~~~~i~~~v~~ 416 (801) -.|.|+++ + .+|.+||.=| |.+=++++- ..+.|.|..-+.+.+. -.|.-|+.+ T Consensus 326 agRvwYag~~~~~iD~dkng~~~~~~ilfSqLv~s~~di~nCyQd~DPTsee~~dLidTDGg~iri~ga--h~ii~Lv~f 403 (771) T protein:vir:95 326 AGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNV 403 (771) T ss_pred eeeEEEecceeEEeeccccCCceeeeEeeehhhcchhhcccccccCCCchhhhhhhhhcCCCEEEecCC--CCceeEEEe Confidence 99999886 1 2489998543 333333331 3456788888888764 346678999 Q ss_pred CCcEEEEecCcEEEEeC-C-ccccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeecccceehhh Q lcl|Aclame:pro 417 SEELLLWSDQAQFVLTA-S-DILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNAED 494 (801) Q Consensus 417 ~~~L~l~t~~~q~~~~~-~-~~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~d 494 (801) +..|+||...+-|+|.| + ..+|.++..+.++++.+|++.=.-|++|+.++|-.+.| |+.....++ .-+.++. T Consensus 404 ~~sLlvfc~NGVWAi~ggsd~g~tAtdY~ltKIs~vg~sspnSvVvvg~~i~ywsdtg----Iyal~~Ndf--n~~tAqn 477 (771) T protein:vir:95 404 GSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTRNQY--GDYVANN 477 (771) T ss_pred cceEEEEEecceEEEEeccCCceeeeeeEEEEeeeeccCCCccEEEecceEEEeeCCc----eEEEeeccc--Ccchhhc Confidence 99999999999999954 3 37999999999999999998888899999999999987 677766653 5789999 Q ss_pred HH-HHHHHhcCC---CeEE---EEEcCCCCeEEEEEEcC--CCE--E--EEEEeeeCCCceEEEEEEee---ec-CCceE Q lcl|Aclame:pro 495 MT-AHVPNYIPN---GVFS---ISGTTAENFVAILTSGA--PNR--V--YIYKFLYIDEEIRQQSWSHW---DF-GDNVT 557 (801) Q Consensus 495 ls-~~~~~~~~g---~v~~---~~~~~~~~~~~~~~~~~--~~~--l--~~~ty~~~~~e~~~~aW~~w---~~-~g~~~ 557 (801) || ..|.+|... ..+. -.+-.-++.+.|+..+. .+. + +++. -...|+.+| +. .|..- T Consensus 478 LTekTIq~~~~~I~~dk~knVtg~fd~~e~rvyw~yPn~~D~~~e~~t~LV~d-------LalgaFYp~~i~~~~ag~l~ 550 (771) T protein:vir:95 478 LTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVFD-------LALGAFYPSKIGSLTAGRLP 550 (771) T ss_pred cchHHHHHHHhhcchhhhcceEEEEEccCCEEEEEecceecCCCcceeeeeee-------ecccccccccccccccCccc Confidence 99 888888654 1111 13444455666655321 111 1 1211 123477777 32 23221 Q ss_pred E-EEE---EE-----cCCEEEE-EEE---eCCCEEEEE------------EEEeecc----CCCCcccceeeeeeeEEEe Q lcl|Aclame:pro 558 V-FAA---QV-----INSTMTV-LMS---NEHAVWMGR------------LHFTKDS----IDLPGEPYRLYIDAKRKYT 608 (801) Q Consensus 558 ~-~~~---~~-----~~d~ly~-vv~---r~~~~~~~~------------~~~~~~~----~~~~~~~~~~~lD~~~~~~ 608 (801) + ++. -+ -+.++-+ ..+ .+..+.+.+ +....+. +...+.....|+|.+. T Consensus 551 ~~vg~~~~p~~~lv~T~~eV~v~~~~v~~tG~~vtV~~~~r~~~~~~~~y~~~~~dg~~g~~~Fa~~~~~~f~DW~s--- 627 (771) T protein:vir:95 551 IPVGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKS--- 627 (771) T ss_pred eeeeeeecCccccccccceEEecceeeEecCCceEEEEEEeeccccceEEEEEEecCCCeeEEeccccCcceeeccc--- Confidence 1 110 00 0111110 000 001111111 0000000 0001111122333211 Q ss_pred cccccccccccceeeccccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeE-EE-Ee Q lcl|Aclame:pro 609 IPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPF-TY-TF 686 (801) Q Consensus 609 ~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s-~v-~~ 686 (801) +.|+ .|.. -++..+ + ...+|+... .+-+||-. ++ .+ T Consensus 628 -------------------v~~~------~vdy---~sy~~~-----g------Y~~~gd~~~---~k~~PYit~y~~~t 665 (771) T protein:vir:95 628 -------------------VDGI------GVDA---PAYLLT-----G------YLAGGDYQR---EKFVPYITFHFKKT 665 (771) T ss_pred -------------------CCCc------ccch---HHHHHh-----h------hhccchhee---eeccceEEEEEEee Confidence 0000 0000 000000 0 001111100 00112211 00 01 Q ss_pred CCeeEeccCCCCccceEEeeeEEEEEEEEEeecceeEEEEeCCCCc-ceeeeeccceeccccccCCccccccceE--EEE Q lcl|Aclame:pro 687 SKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSR-EFIYTMAGARLGSDNLRVGGSNIGTGQY--RFP 763 (801) Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~tg~~--~vp 763 (801) -.=++...+|+-. -....+- +-....+...++.= ..-++ .+.|.+...+... +..+.--..+.++ +.. T Consensus 666 edg~v~~~~g~~~-p~n~sSc--lm~~sw~ws~s~~t----~k~~~~~eaYk~~~~~~p~--~~~~~~yp~~~VV~TKsr 736 (771) T protein:vir:95 666 EDGFVEDAEGDWT-PTNQSSC--MVQSQWSWTNSPAS----NKWGRTWQAYRFRRHFFPD--NIDNQFDDGNSVVETKSR 736 (771) T ss_pred cccceeccccccc-ccCCcce--EEEEEeeeecCCCC----CccccchheeeecceeccC--CcchhcCCccceeeeehe Confidence 1111211111100 0011111 11222233332210 11111 2344444333322 2222221122233 235 Q ss_pred EeeecceeEEEEEECCCCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 764 VVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) Q Consensus 764 ~~~~~~~~~v~I~~~~P~P~tvlai~weg~y~~r~ 798 (801) ++|..+..+++|++..--.++|++.++--.-|-.. T Consensus 737 iRG~Gr~~~~rf~s~~gKdlhl~Gysil~~~~~~~ 771 (771) T protein:vir:95 737 LRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) T ss_pred eeecceEEEEEEEecCCcceEEEeEEEEEeecCcC Confidence 78899999999999999999999999877777666 No 30 >protein:vir:8837 Length: 513 # NCBI annotation: constituent protein # Family: family:all:4957 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775245;genbank:gi:27476043;genbank:GeneID:2700591 Probab=98.19 E-value=2.9e-06 Score=50.97 Aligned_cols=482 Identities=13% Similarity=0.083 Sum_probs=234.4 Q ss_pred CceeeeechhhhcccccCchhHHhhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~~~~y~l~ 80 (801) ||......-.-.|.|--+.|.+-=.+.-..+.|+++. .|++.||||-.-+++-..... .-.++|. .....+++. T Consensus 1 ~~~~~~~~~~~~g~~~d~~p~~lp~~a~s~~~N~~~~-~~~~~~~~g~~pv~a~~~~~~----~g~~~~~-~~g~~~~~~ 74 (513) T protein:vir:88 1 MALERQEVKNPTGIVTDIAPADLPLDKWSFGNNVRFK-NGKAQKALGHSPIFDTAQAPI----LDMFPFI-RNNIPYWLL 74 (513) T ss_pred CCcCChhhcccccceeccChhhcCCCcceeeeeeeEe-cceeeecCccceeeecCCCCc----eeeeeee-cCCCeEEEE Confidence 8887776666667776666555434445677777765 688899999998854222111 2246664 566788888 Q ss_pred EeCCeEEEEeCCCcEEEEEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEEEeccCccc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~irv~~~~g~~~~v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) .+...++.++.. ...-++. .+| +.......++++.+|+++++|...+|+.+.-++ T Consensus 75 ~~~~~~~~~~~~-t~~dvs~-~~~--~~~~~~~w~~~~f~~~i~a~ng~~~~q~~~~~s--------------------- 129 (513) T protein:vir:88 75 CSEKRLYLADGT-TIIDVSP-GPY--SASVTNRWSVGSFNGVIFANDGVNPPHHLPPTE--------------------- 129 (513) T ss_pred eeceEEEEecCc-eeeeccc-cce--eecccCceeeeeecCEEEEEcCCCcceEEcCCC--------------------- Confidence 888777777632 2322333 333 221223466777777777766554443210000 Q ss_pred eeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCcceeEE Q lcl|Aclame:pro 161 RRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGL 240 (801) Q Consensus 161 ~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ti 240 (801) . T Consensus 130 ---------------------------------------------------------------------------~---- 130 (513) T protein:vir:88 130 ---------------------------------------------------------------------------S---- 130 (513) T ss_pred ---------------------------------------------------------------------------c---- Confidence 0 Q ss_pred EEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEEEE Q lcl|Aclame:pro 241 QTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALV 320 (801) Q Consensus 241 t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv 320 (801) .+.+||.. | T Consensus 131 -------------------~f~dl~g~------------------------------------------------p---- 139 (513) T protein:vir:88 131 -------------------VFRVLPNF------------------------------------------------P---- 139 (513) T ss_pred -------------------eeeeccCC------------------------------------------------C---- Confidence 00111100 0 Q ss_pred eccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEec--------CCEEEEEecCCcccc---ccccc Q lcl|Aclame:pro 321 RASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS--------GENIILSRTSKYFNF---FPASV 389 (801) Q Consensus 321 ~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~--------~~~v~~S~~gd~~nF---~~~s~ 389 (801) ..| .-+.|.+|++||++++ |+.|+.|..+|...+ |-.+. T Consensus 140 -----------~~~-------------------~a~~i~v~~~flv~~~~t~~~~~~PnrV~wS~~~D~~~~P~~W~~t~ 189 (513) T protein:vir:88 140 -----------ANT-------------------TFRRLKSFKNFLIGLNVTSNSIEMPQMVWWSTSADAGGVPASWDPTD 189 (513) T ss_pred -----------ccc-------------------ceEEEEEEeeEEEEeecccCcCCCCceEEEecccCCccccccccccc Confidence 000 1123567899999864 788999999996443 21221 Q ss_pred cccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEe-CCccccccceEEEEEee-ecccCCCCcEEeCCeEEE Q lcl|Aclame:pro 390 SNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLT-ASDILSSRSVGLNLTTQ-FDVQDRARPHGVGRNVYF 467 (801) Q Consensus 390 ~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~-~~~~lTP~~~~i~~~s~-~~~~~~v~Pv~vg~~v~f 467 (801) .+ .+++=.++ .+....|...++....|+||++.+-|.++ .++ |....+++... -+|.+.-.=+.+|+.++| T Consensus 190 ~t-~~a~~~~l---~d~~g~~v~g~~~g~~liif~e~~i~~m~y~g~---~~if~~~~i~~~~G~~~p~SI~~~~~~~ff 262 (513) T protein:vir:88 190 PT-KDAGQNTL---ADTNGAIVDGVKLRDSFIIYKEDSVYSMRYIGG---LYIFQFQQLFNDVGILGPNCAIEFDGNHFV 262 (513) T ss_pred cc-Cccccccc---CCCccceeeeeecccceEEEecccEEEEEecCC---CceEEEEeecccccccCCceeEEECCeEEE Confidence 11 22222222 33334455567777899999999999996 332 33334444433 334443444889999999 Q ss_pred EecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCC-----CeEEEEEcCC-CCeEEEEE-Ec-C----C--CEEEEE Q lcl|Aclame:pro 468 SSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-----GVFSISGTTA-ENFVAILT-SG-A----P--NRVYIY 533 (801) Q Consensus 468 v~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g-----~v~~~~~~~~-~~~~~~~~-~~-~----~--~~l~~~ 533 (801) +++.| ++. + +..+-+..+. ..+++.|-. ....+...-. .+..+||+ .. + . +.+++| T Consensus 263 ls~~G----f~~-~--~G~~~~~Ig~---ekVdk~f~~~~n~~~~~~~~~~~d~~~~~v~~~y~s~~~~~~~~~~~~lVY 332 (513) T protein:vir:88 263 VGHGD----VYV-H--NGVQKQSVID---AQVRKFFFSDINPDNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIW 332 (513) T ss_pred EeCCc----eEE-e--cCceeeeccc---chhhhhhhccCCcccceEEEEEEcCcccEEEEEecCCCCCCCcccceEEEE Confidence 99987 442 2 1111112211 233333322 2322322222 23334433 11 1 0 346666 Q ss_pred EeeeCCCceEEEEEEeeecCCceEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEeccccc Q lcl|Aclame:pro 534 KFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGT 613 (801) Q Consensus 534 ty~~~~~e~~~~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~ 613 (801) -|. + ..|+.-+++..+- .....-+.+... ..+....+ .|... T Consensus 333 d~~----~---~~Ws~~~~p~~~~--g~~g~~~~~~~~--------------~~~~~~~~-------~d~~~-------- 374 (513) T protein:vir:88 333 NWK----E---NTWSIRDLPNVLS--GAYGIIDPKTSN--------------LWDDDSNP-------WDTDT-------- 374 (513) T ss_pred Ecc----C---CeEEEEeccchhh--cccccccccccc--------------eecccccc-------cccch-------- Confidence 663 2 2576655543210 000000000000 00000000 11100 Q ss_pred ccccccceeeccccccCCcccC--ceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeE Q lcl|Aclame:pro 614 YNDDTYQTSISLSTIYGMNFTK--GRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLI 691 (801) Q Consensus 614 ~~~~~~~t~~~~~~~~gl~~l~--g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~ 691 (801) .....++.-.. -..+.-+++|.++.+. ++ .-.-|-++++.++.+...+ T Consensus 375 -----------~~~~~~~~~~~~~sl~~~~~~~~~~~~fd---------------~~----~~f~G~~lea~~~t~~~~~ 424 (513) T protein:vir:88 375 -----------SVWGEGSYNPAKSSMIFTSFQDAKLFLFG---------------ET----STFSGQSFTSTLERSDIYL 424 (513) T ss_pred -----------hhhhccccccccceeEeeeccCCceeeec---------------cc----ccccCCceEEEEEecCccc Confidence 00001110000 0111223333333211 00 0134788888888766554 Q ss_pred eccCCCCccceEEeeeEEEEEEEEEeecceeEEEEeCCCCcc-eeeeeccceeccccccCCccccccceEEEEEeeecce Q lcl|Aclame:pro 692 KKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSRE-FIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQT 770 (801) Q Consensus 692 ~~~~~~~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~ 770 (801) . ++... .+|+++...+...|.+.+.+...... ........ . .....++..++++...+- T Consensus 425 ~----~~~~~------~~i~~v~~~~t~~g~~t~~vg~~~~~~~~~~~s~~-----~-----~~~~~~~~~~~~r~~gRy 484 (513) T protein:vir:88 425 G----DDRMM------KTVSAVIPHITGNGVCNIWVGNAQVQGSGIRWKGP-----Y-----PYRIGQDYKIDTKHVGRY 484 (513) T ss_pred c----Cchhh------eeeeeeeeeeecceEEEEEEeeeccCccccccccc-----e-----eeecccCceEEeccCCce Confidence 2 11111 24555555566677666654322111 11111000 0 000122344666777888 Q ss_pred eEEEEEECCCCCEEEEEEEEEEEEecc-ccC Q lcl|Aclame:pro 771 NTVTIESDASTPLNIIGCGWEGNYLRR-SSG 800 (801) Q Consensus 771 ~~v~I~~~~P~P~tvlai~weg~y~~r-~rr 800 (801) .+++|+...--|+++.++++|.. .| .|| T Consensus 485 ~~~ri~i~~~~~w~~~G~~ve~~--~~~g~R 513 (513) T protein:vir:88 485 IALKFDFASAGDWYFNGYTLEMA--PKAGMR 513 (513) T ss_pred EEEEEEccCCCceEEeeEEEEEe--cCCCCC Confidence 88888888889999999998865 43 555 No 31 >protein:vir:3133 Length: 911 # NCBI annotation: hypothetical protein # Family: family:all:5234 # MgeID: mge:64 # MgeName: VpV262 # Cross-refs: genbank:acc:NP_640315;genbank:gi:21234408;genbank:GeneID:956056 Probab=97.52 E-value=5.1e-05 Score=44.10 Aligned_cols=696 Identities=12% Similarity=0.118 Sum_probs=261.7 Q ss_pred Cceeeeechhhh--cccccCchhHHhhhh-hhhhhcceeeecCCceeCCcc-------eeeeeecCCCCcccceEEEE-- Q lcl|Aclame:pro 1 MALISQSIKNLK--GGISQQPDILRFTEQ-GSVQINGWSSESEGIQKRPPM-------IHLKTLGTAGYVGAQPYVHL-- 68 (801) Q Consensus 1 Ma~v~~~~~~~~--~Gvsqq~d~~r~~~q-~~~~~N~~~~p~gGl~rRpGt-------~~v~~l~~~~~~~~~~~~~~-- 68 (801) ||.-.+....|+ +|--..-.+..|... +-..+||=....|=-.||-|. +|+......++ ++..|-- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 78 (911) T protein:vir:31 1 MAARKGAVNRFTPVRGWVTEGNLANYGQDVALDVENMDIEKTGLTQRRFGLFAETSSEQFLSTFTATAR--ARGLLAVKE 78 (911) T ss_pred CccccccccccccceeeeecCchhhcCceeEeeeccccchhcccchhheeeeeccchhhhhhhhhhhhh--hcceeehhh Confidence 887666665553 341111123333222 235789888777777788775 33322211111 1111100 Q ss_pred E--EeCCCceEEEEEeCCe-EEEEeCCCc------EEEEEccCccccccCC--ccceEEEEEcCEEEEecCCeeeeEEee Q lcl|Aclame:pro 69 I--NRDEFEQYFVVFTGED-IKVFDLDGK------EYQVRGDRSYVRTANP--REDLRMVTVADYTFVTNRKVVVQSNDQ 137 (801) Q Consensus 69 f--~~~~~~~y~l~~~~~~-irv~~~~g~------~~~v~~~~~y~~~~~~--~~~l~~~q~~D~~~i~~~~~~~~~~~~ 137 (801) + ..+..+--||+|..|| +.|...... ++++..-..-.. .+. .+-.+..---..-.|.||...|--+. T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 156 (911) T protein:vir:31 79 WREAWGDKDVNMLIFHAGYKVHVVQDTAPLRDANILLTIDLLEAGIK-LDGVIDSPVHISVGVGFAIITNPRIEPVLIK- 156 (911) T ss_pred HHHhhCCCcceEEEEecCcEEEEEecccCccccceEEEeeeeccCce-eeeeecCceeEEeeceEEEeecCccceEEEE- Confidence 0 1123344566776655 333322111 122211000000 000 01123322335667888888775332 Q ss_pred ecccCCCCCCccEEEEeccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeecccc Q lcl|Aclame:pro 138 SVNLPGFKDQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNK 217 (801) Q Consensus 138 ~~~~~~~~~~~~~~~~v~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~ 217 (801) .... ..+++-. -+|- ..++.+... ..-||..+......+..++. -+.|.++--+.....+- T Consensus 157 ~~~~-----~~~~~~~---~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------ 217 (911) T protein:vir:31 157 LDDV-----DDEGVPT---LSYE-PLTLLIRTR---ELLTPYTTGTNYGDTLTPEE-EWNLYNSGWATITRATK------ 217 (911) T ss_pred eecc-----CccCccc---cccc-ceeeEeeeh---hhccccccccccCcccCchh-hcccccccceeeeeecc------ Confidence 1110 1111111 1111 011111100 01111111111111111111 01111110000000000 Q ss_pred EEEEecCceEEEEe-------CC-C--cce-e-EEEEecCCCcc---eeeeeeeeccccccccccccCCeEEEEeecCCC Q lcl|Aclame:pro 218 WRFNVGPGFIHILA-------PN-N--DNV-W-GLQTKDGYADQ---LINPVTHYTQSFQKLPINAPDGYIVKIVGDTSK 282 (801) Q Consensus 218 ~~~~~~~~~~~i~~-------~~-~--~~~-~-tit~~dg~~~t---~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~ 282 (801) -..+++.+|+.. .+ . .+. + ++.-+....-. .+..++++.-++.... -|-|.-+ T Consensus 218 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------- 285 (911) T protein:vir:31 218 --DKSGSGTVYVNPVQYYFDKRGVYPSHSVLYNSMKQESAKEIVALNVFSPWADEKINFGTTT--PPLGRYI-------- 285 (911) T ss_pred --cCCccceEEEchhheeecccCcCcchhhhhhhhhhhccceeEEEeeeccccccccccccCC--Cchhhhh-------- Confidence 001111111100 00 0 000 0 00000000000 0000111111111000 0001100 Q ss_pred CcceEEEEEE----cCC---------eEEEEEeccc-----eeeeEeeccccEEEEeccCCeEEEeecccCcccCCCccc Q lcl|Aclame:pro 283 TADQYYVRFD----LNR---------KVWVETIGWN-----TRTHLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTT 344 (801) Q Consensus 283 ~~~~y~v~~~----~~~---------~~W~e~~~~~-----~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~~ 344 (801) ...||...- .+- |+ .|-.+|. .+++++.--....+--.+.|+.+|. T Consensus 286 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~e~~np~gl~~igt~~n~k~~a~~~~~~~-------------- 349 (911) T protein:vir:31 286 -HSAYYFDSAAILSLGIGNLTPPTSDGT-TEGSGPAEEEISNPIGLDNIGTVNNLKLIAEGTVRWT-------------- 349 (911) T ss_pred -hhheeeccceeeeecccccCCCCCCCc-cCCCCCchhhhcCCCCcccccchhceeeeeccceeee-------------- Confidence 112332110 000 00 0000000 1112221111111122334443332 Q ss_pred cCCchhcCCCceEEEEEcCceEEec-----CCEEEEEecCC--------ccccccccc--cccCCCccEEEEEcCCccee Q lcl|Aclame:pro 345 NPYPSFTGQTINDIFFFRNRLGFLS-----GENIILSRTSK--------YFNFFPASV--SNYSDDDPIDVAVSHDRVST 409 (801) Q Consensus 345 np~psf~g~~p~~v~f~q~RL~~~~-----~~~v~~S~~gd--------~~nF~~~s~--~~~~D~D~i~~~~~~~~~~~ 409 (801) +...|+|++||.+|++|+. ...|.+|+.-+ |++=++++- ..+.|.|..-+.+.. ... T Consensus 350 ------~~~r~r~~~~yaGRVfyaD~dkngk~rIlFSqLv~sl~di~nCYQdaDPTSeee~DLIdTDGg~vri~g--ah~ 421 (911) T protein:vir:31 350 ------VKDRPRCSGYHNGHVYFGDRDKNGKTRILVSQLVNSLDNIPKCFQDADPTAEEINDLIATDGFTMYPVG--MGA 421 (911) T ss_pred ------ecccccceeeeccEEEEeeeccCcceeEEEEeeccccccccccccCCCccccccchhhhcCCcEEecCC--CCC Confidence 2347999999999999995 45899998653 444444432 223456777777765 356 Q ss_pred eeeeeecCCcEEEEecCcEEEEeCCc--cccccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeecc Q lcl|Aclame:pro 410 LKYAVPFSEELLLWSDQAQFVLTASD--ILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVS 487 (801) Q Consensus 410 i~~~v~~~~~L~l~t~~~q~~~~~~~--~lTP~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~ 487 (801) |+-|+.+++.|++|..++-|.|.|.+ ..|.++..|.+++..+|++.=.-|++|+.++|-++.| |+.+.+.++ T Consensus 422 Ii~LV~~G~sLlVFcaNGVWAI~G~d~~g~TATdy~ItKIsdvGcsspNSVVvVgn~i~fWSd~G----IyaLganqf-- 495 (911) T protein:vir:31 422 PITMVEFNKRLLLLCTNGVWAIRGTSGGGATATDFTLDKVASVEFNSPQSVVDIGTAIVFWSERG----IIAIGVNDF-- 495 (911) T ss_pred ceEEEEecCeEEEEEeCcEEEEeccCCCceeeeeeEEEEEeeeeeCCCCeEEEecCceEEeeCCc----EEEEeeccc-- Confidence 88899999999999999999998754 6999999999999999998888899999999999987 667666553 Q ss_pred cceehhhHH-HHHHHhcCC----CeEE--EEEcCCCCeEEEEEE--cCCCEEEEEE----eeeCCCceEEEEEEeeecCC Q lcl|Aclame:pro 488 SVKNAEDMT-AHVPNYIPN----GVFS--ISGTTAENFVAILTS--GAPNRVYIYK----FLYIDEEIRQQSWSHWDFGD 554 (801) Q Consensus 488 ~~~~~~dls-~~~~~~~~g----~v~~--~~~~~~~~~~~~~~~--~~~~~l~~~t----y~~~~~e~~~~aW~~w~~~g 554 (801) .-+.++.+| ..|..|... .++. -.+...++.+.|... .|.++.|.+. +.. .-...+|-+|...+ T Consensus 496 nD~tAnNLTesTIQ~y~d~I~~dkIkNVtgtyd~de~rVyW~yPn~lDe~teykt~~~~ILVf---dLatgaFYPwtvs~ 572 (911) T protein:vir:31 496 GDLTSNNLTENTIDEYYDSLDRDIIKNVKGTFINDENRVYWVVPNKQDSNGEYKTDGELVLVL---NLDTGGFYKHTVSG 572 (911) T ss_pred CccccccccHHHHHHHHhhcChhhhceEEEEEEccCCEEEEEecCccCCccceeecCceEEEE---EeccCcccceeeec Confidence 456788888 667777643 1222 234455667777665 4555665532 111 11134899998754 Q ss_pred ceEEEEEEE-----cCCEE---------EEEEEeCC-CEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccc-cc Q lcl|Aclame:pro 555 NVTVFAAQV-----INSTM---------TVLMSNEH-AVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYND-DT 618 (801) Q Consensus 555 ~~~~~~~~~-----~~d~l---------y~vv~r~~-~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~-~~ 618 (801) .-. +..-+ .+.+. +++++... .+...+.+. .+...+.-|..-+|-. ..+.++- +. T Consensus 573 gpL-l~~p~y~Lv~TreEvtvPi~~etgaiIve~gsdPV~~tl~vd---ttGvDg~ayLl~frdg-----~~g~~~f~a~ 643 (911) T protein:vir:31 573 GPL-LHAPFRRLVNTRAEVSIPITETDGTVITDTLGDPVTVTRTVT---TTGVDGLAYFASFDDG-----VNGQFNFIAE 643 (911) T ss_pred cee-ecccccccccccccceeeEEeecceEEEecCCCCeEEEEeee---cccccceeEEEeeccC-----CcceEEEEEe Confidence 322 21100 01111 12222221 122221111 1111111110000100 0000000 00 Q ss_pred cc--eeeccccccCCcccCceEEEEecCCceeeccccccccccCcEEE--------Ec-CCccCceEEEEEeeeEEEEeC Q lcl|Aclame:pro 619 YQ--TSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLR--------LD-GNQEGQVVYIGFNIPFTYTFS 687 (801) Q Consensus 619 ~~--t~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~--------l~-~~~~~~~v~vGl~y~s~v~~~ 687 (801) .+ +...+..+..+.... +..++|-.+. +-.++.+....+.++ +- ..+.++. .||.|. ++ T Consensus 644 ~~~~~~~dw~~~~~~~~~~---y~s~~~~~y~-~~~~~~~~~~~pyi~sy~~~~~rv~~~~y~~~~--a~~~f~-~~--- 713 (911) T protein:vir:31 644 HQPWGFADWANVPNMTRVN---YSSYVDFAYE-YPEVMIGNISLPYIHSYYLTGIRVQTEQYTTET--AHLSFH-RV--- 713 (911) T ss_pred ecCCeeeccccCccccccc---hhHHHHhhhh-hhhhhhhcccCceeeeeeeeeeEEeccceeeec--ccceeE-ee--- Confidence 00 000011000111000 0111110000 000111111111100 00 0000000 111110 00 Q ss_pred CeeEeccCCCCccceEEeeeEEEEEEEEEe--------------ecceeEEEEeCCCCcceeeeeccceecccc-ccCCc Q lcl|Aclame:pro 688 KFLIKKTAEDGSTATEDIGRLQLRRAWVNY--------------EDSGAFIIRVNNLSREFIYTMAGARLGSDN-LRVGG 752 (801) Q Consensus 688 ~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~--------------~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~ 752 (801) + . -....-|.+..|++.+.+ .++-...+ |+ +..+..+.++..+.... +..-+ T Consensus 714 ----~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-VN--GDAE~GtmTGWtvtaG~~d~~Ta 780 (911) T protein:vir:31 714 ----Q--A----HQTTALGTVTFHKVDMMVSTGMQVISFHKDDLLRTEAVTL-VN--PDAETGDATGWTVTAGTLDVRTA 780 (911) T ss_pred ----e--c----ccceeeeeeeeeeeeehhhccceeeeeccccceeeeeeEE-Ec--CCCCCCCCCcceeeccchhhccC Confidence 0 0 001112333344433222 11111111 11 11123334444433221 12223 Q ss_pred cccccceEEEEEeeecceeEEEEEECCC-----------CCEEEEEEEEEEEEeccc--cC--C Q lcl|Aclame:pro 753 SNIGTGQYRFPVVGNAQTNTVTIESDAS-----------TPLNIIGCGWEGNYLRRS--SG--I 801 (801) Q Consensus 753 ~~~~tg~~~vp~~~~~~~~~v~I~~~~P-----------~P~tvlai~weg~y~~r~--rr--v 801 (801) -|+..|+.-|- + ...++-.+.|+-- ++.++. .|-+-|-.+. -| | T Consensus 781 ~p~~rGSyfFa--~-~nn~n~aL~QDIDSagaaaIDAG~v~ynvS--awl~gyAaqnd~Dr~~l 839 (911) T protein:vir:31 781 APLYQGSYYFW--S-DSNANFAAYQDIDPVGGGYITAGELANNVI--EAKLSWAARGNTDLGTV 839 (911) T ss_pred CchhcceEeEc--C-CCCcchhhheeccccccceeeeccchhhhh--hhhhhhccCCCCccceE Confidence 34556665442 1 1233434444332 333332 2666666653 34 3 No 32 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=97.46 E-value=6.2e-05 Score=43.63 Aligned_cols=613 Identities=11% Similarity=0.052 Sum_probs=197.5 Q ss_pred eEEEE--EEeCCCceEEEEEeCCeEEEEeCCCc------EEEEEc------cCcccccc-CCccc---eEEEEEcCEEEE Q lcl|Aclame:pro 64 PYVHL--INRDEFEQYFVVFTGEDIKVFDLDGK------EYQVRG------DRSYVRTA-NPRED---LRMVTVADYTFV 125 (801) Q Consensus 64 ~~~~~--f~~~~~~~y~l~~~~~~irv~~~~g~------~~~v~~------~~~y~~~~-~~~~~---l~~~q~~D~~~i 125 (801) |++.+ -+|...|=--+..+..++.-|. +|. +....| +.-++... ++... +.|.-+....|| T Consensus 1 m~~~~~q~sF~~GElsP~l~gR~Dl~~y~-~g~~~~~N~~~~p~Gg~~rRpGt~fva~~~~~~~~~rLipF~fs~~q~y~ 79 (825) T protein:vir:73 1 MAFSWIQPSFAGGEIGPSLYGRIDMSKYQ-VALRKCDNFIVRQYGGVENRPGTRFVGPAKYPDRKCRLIPFQFSTVQTYA 79 (825) T ss_pred CccceeccccccceechhhcccchHHHHH-HHHHHhcCcEEEecCCceecCchHHhHhhcCCCCCEEEEEEEeCCCcEEE Confidence 22211 2233332222222222221111 010 000000 01111100 00000 111111111111 Q ss_pred ecCCeeeeEEeeecccCCCCCCccEEEEeccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhc Q lcl|Aclame:pro 126 TNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNN 205 (801) Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~ 205 (801) + .... ..--+|-.++. +..++. ..+....+...+....+...++++.+...|... T Consensus 80 L---------efg~--------~~lrv~~~gg~------v~~~~~--~~~e~~TPy~~~~l~~l~~~QsaD~~~i~h~~~ 134 (825) T protein:vir:73 80 L---------EFGH--------NYMRVIKDGAY------VLTTSN--VIYELAMPYADTDLFRIKFTQSADVLTLVHPAY 134 (825) T ss_pred E---------EEeC--------CeEEEEeCCce------EeccCC--ceEEEecccchhhhhhheeeeecCEEEEEcCCC Confidence 1 1000 00001111110 111111 122222333334444455555666655555555 Q ss_pred ccceeeeeccccEEEEecCc------------eEEEEeCCCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeE Q lcl|Aclame:pro 206 LGNPNNDQDPNKWRFNVGPG------------FIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYI 273 (801) Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~------------~~~i~~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~ 273 (801) .+....+...+.|++..... .+.+...+.....+++.+....+ ..-.|.. T Consensus 135 pp~~L~r~~~~~W~l~~~~f~~gp~~~in~~~sv~v~asg~tg~~TiTaS~a~~~------------------~~~vG~~ 196 (825) T protein:vir:73 135 PPKELRRYAHDNWQIVDVTTKNGPFEDINVDETVKVYASASTGTITLTASSAIFG------------------AEQVGKL 196 (825) T ss_pred ceeEEEEecCCCcEEEEEeccCCccccccccccceeeecccCceeEEEeeccccC------------------chhcCeE Confidence 55555555666666543211 11111111111122222111000 0001222 Q ss_pred EEEeecCCCCc------------------ceEEE-EEEcC----------CeEEEEEeccceeeeEeeccccEEEEeccC Q lcl|Aclame:pro 274 VKIVGDTSKTA------------------DQYYV-RFDLN----------RKVWVETIGWNTRTHLHYHTMPWALVRASD 324 (801) Q Consensus 274 v~i~~~~~~~~------------------~~y~v-~~~~~----------~~~W~e~~~~~~~~~~~~~t~p~~lv~~~~ 324 (801) +.+........ +.+|. ....+ ...|....+.+. +........++... T Consensus 197 i~~~~~~v~si~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~t~~~~a~~g~~~~~~~g~~~----~~~~~~~~~~~~~~ 272 (825) T protein:vir:73 197 FYLEQPAVDSVPVWETSKTTAINDVRRADSNYYRANTSGKTGTLRPSHTEGMSWDGWGGTGS----DDTGIQWEYLHSGF 272 (825) T ss_pred EEEecccccccceeeeeeEEEeeeEEECCCceeeeecccccceeeccccCCceeEeeeeecc----cCCceEEEEEecCC Confidence 22211111000 00000 00000 000111000000 00000001111112 Q ss_pred CeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEecCCEEEEEecCCccccccccccccCCCcc-EEEEE- Q lcl|Aclame:pro 325 GNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDP-IDVAV- 402 (801) Q Consensus 325 ~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~D~D~-i~~~~- 402 (801) +.+++....- +. ...+++=.+|...... .+.++ .+... T Consensus 273 g~~~it~~~~------------------------------------~~--~~~~~~~~~~~~~~~~--~~~~~t~~~~~~ 312 (825) T protein:vir:73 273 GIAKITAVAG------------------------------------DG--LTATADVVSFIPSQVV--GSANASYKWAKY 312 (825) T ss_pred ceEEEeeccc------------------------------------cc--eeeccccceecccccc--cCCCCCcccccC Confidence 2222111100 00 0111222222211110 00000 01100 Q ss_pred ----cCCcceeeeeeeecCCcEEEEec--CcEEEE-eC-Cc--cccccce-----EEEEEeeecccCCCCcEEeCCeEEE Q lcl|Aclame:pro 403 ----SHDRVSTLKYAVPFSEELLLWSD--QAQFVL-TA-SD--ILSSRSV-----GLNLTTQFDVQDRARPHGVGRNVYF 467 (801) Q Consensus 403 ----~~~~~~~i~~~v~~~~~L~l~t~--~~q~~~-~~-~~--~lTP~~~-----~i~~~s~~~~~~~v~Pv~vg~~v~f 467 (801) ....+..+ .-++.-|++... ..|.++ +- ++ -+.|+++ .|....+-.-.+.++=+.-.+.+++ T Consensus 313 ~~~~~~gyPs~v---~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~s~~~~~~i~~~~~~~~L~~ 389 (825) T protein:vir:73 313 AWNSVNGYPSTV---VYYQQRLYFAASTAYPQTIWASRTGDYKDFGKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGNLVA 389 (825) T ss_pred CcccCCCCccEE---EEEcceEEEeecCCCCCEEEEEccCCccccccCCCCCCCccEEEEEcCCcceeEEEEeecCcEEE Confidence 01111111 223334555543 234444 21 11 2333331 1222111111122332333345666 Q ss_pred EecCCCeEEEEEEeeeeecc--cceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCC---ce Q lcl|Aclame:pro 468 SSPRASFTSINRYYAVQDVS--SVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDE---EI 542 (801) Q Consensus 468 v~~~g~~~~v~~~~~~~~~~--~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~---e~ 542 (801) .+.++++ .+ ..... -++....+..+-.. ++..+.-...-+.++| +.+....+.-|.|-.... -+ T Consensus 390 ~t~~~e~----~l--~~~~~~~lTP~~~~~~~~s~~----g~~~~~Pv~vg~~~~F-v~~~g~~vre~~~~~~~d~~~~~ 458 (825) T protein:vir:73 390 LTSGGEY----TI--SGDQNKVLTPSAFSFSSQGNN----GSSNVPPIAVANIALF-IQEKGSVVRDLAYSFDVDGYQGT 458 (825) T ss_pred EecCceE----EE--ecCCCcccceeeEEEEeeeee----ccccccceEeCCeEEE-EeCCCCeEEEEEEeeecCceecc Confidence 5666653 11 11111 12222222211110 1111111112233443 334445565555532211 11 Q ss_pred EEEEEEeeecCCc-eEEEEEEEc-CCEEEEEEEe----------CCC----------EEEE------------EEEEeec Q lcl|Aclame:pro 543 RQQSWSHWDFGDN-VTVFAAQVI-NSTMTVLMSN----------EHA----------VWMG------------RLHFTKD 588 (801) Q Consensus 543 ~~~aW~~w~~~g~-~~~~~~~~~-~d~ly~vv~r----------~~~----------~~~~------------~~~~~~~ 588 (801) ++..=++|-+.|. +..++.... ...+|++... +.+ +.++ -+.+..+ T Consensus 459 dlt~~a~hl~~~~~~~~~a~~~~p~~~~~~v~~dg~l~~~ty~~~q~v~aW~~~~~~g~v~~~~~i~~~~~D~l~~iV~R 538 (825) T protein:vir:73 459 DLTILANHLFQKHSIVDWSFCIVPYSSAFCIRDDGKLLVLTYLRDQQVFAWAPQSSAGKYESTCSISEGSEDAVYFVVNR 538 (825) T ss_pred chhhhhHhhccCCceEEEEEcCCCceEEEEEecCCeEEEEEEeccccceeeEEEecCCcEEEEEEecCCCccEEEEEEEE Confidence 1222224444432 111111111 1222322221 111 0011 1223334 Q ss_pred cCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCC Q lcl|Aclame:pro 589 SIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGN 668 (801) Q Consensus 589 ~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~ 668 (801) +++.....|.++|+.... ......++.+++.+..+.+..++|.||+|++|.+.+||.+- .++.++.++++.+ T Consensus 539 ~~~g~~~~yiE~~~~~~~-~~~~~~~~vD~g~~~~g~~~~~~l~~l~g~tv~~~~~g~~~-------~~v~~g~itl~~~ 610 (825) T protein:vir:73 539 TINGQTVRYIERLSSRLF-TNDEDAFFVDCGLSYDGRNTSSRTMTISGGTGDWSYQVDYP-------VTVSGGAYFVNTD 610 (825) T ss_pred eeCCceEEEEEEeccccc-CCCcceeEEEEEeeecccceeeceeeeCCceEEEEeCCeEE-------EEEcCCeEEeccc Confidence 556666677777776543 33344566677777777777899999999999999999752 3567888999743 Q ss_pred ccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeE---EEEEEEEEeecceeEE-EEeCCCCc--ce---eeeec Q lcl|Aclame:pro 669 QEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRL---QLRRAWVNYEDSGAFI-IRVNNLSR--EF---IYTMA 739 (801) Q Consensus 669 ~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl---~l~~~~v~~~~tg~~~-~~v~~~~~--~~---~~~~~ 739 (801) . .++|||+|......+++.... .......+. ++.++.+....-..|. +.....+. .. .-... T Consensus 611 ~---~~~i~l~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~v~v~~~~~~~a~~~~~~~t~~~~a~~~~~gL~hLe 681 (825) T protein:vir:73 611 V---GAQIQFPYTGTDPDTNEPVAK------ELRGDIISVTSNTAVVVRFNRNVPPVLRNVATTNWQMARQTFSGLAHLE 681 (825) T ss_pred c---eEEEEecccCcccccccceec------eeeEEEccccCceEEEEEecccccceeeeecccCCCcchheeccccccC Confidence 3 478999999887766654321 111111111 1111111111101000 00000000 00 00011 Q ss_pred cce---eccccccCCccccccceEEEEEeeecceeEEEE---EECCCCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 740 GAR---LGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTI---ESDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 740 ~~~---~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~I---~~~~P~P~tvlai~weg~y~~r~rrv 801 (801) ++. +.+.....+ .-...|.+++|-. ...+.+-+ .--.|||..+.+ +|.--.|.||| T Consensus 682 G~~v~v~~Dg~~~~~-~~V~~G~vtl~~~--~~~v~vGl~y~~~~~~l~~~~~~---~g~~~g~~~ri 743 (825) T protein:vir:73 682 GQTVNILSDASVEPQ-KTVTGGAVTLESP--GAVVHIGLPITAEFETLDINING---QETLLDKKQVI 743 (825) T ss_pred CceEEEEECCeeeCC-eEecCcEEEecCC--ceEEEEeeCccceEEecccccCC---CccccCccEEE Confidence 111 111111111 1123456666521 11111111 112466666542 36666788888 No 33 >protein:vir:105563 Length: 396 # NCBI annotation: hypothetical protein # Family: family:all:27455 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164316;genbank:gi:56692963;genbank:GeneID:3197174 Probab=96.23 E-value=0.00084 Score=37.43 Aligned_cols=373 Identities=12% Similarity=0.036 Sum_probs=150.3 Q ss_pred Cceeeeechhhhcc---cccCchhHH----hhhhhhhhhcceeeecCCceeCCcceeeeeecCCCCcccceEEEEEEeCC Q lcl|Aclame:pro 1 MALISQSIKNLKGG---ISQQPDILR----FTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDE 73 (801) Q Consensus 1 Ma~v~~~~~~~~~G---vsqq~d~~r----~~~q~~~~~N~~~~p~gGl~rRpGt~~v~~l~~~~~~~~~~~~~~f~~~~ 73 (801) ||.+.- --| .| |+.-.++.| -..-+++++|.=.++.|=.+||-|.+-+....-. +-.+.-++-+.+.. T Consensus 1 ~~~~~~--~~~-~ginnv~~e~~l~~~~~~~~~~~r~a~nvdi~~~G~~~~r~~~tr~~~g~l~--~~~~~~~~~~~~~~ 75 (396) T protein:vir:10 1 MATTSL--VPL-AGINNVAEDAALQRGGESPRLYVRDAVNIDLSPAGKAQLRASVRQVTDQPFR--QLWQSPLHGDAFGA 75 (396) T ss_pred Ccceee--eee-ecccccccccccccCCCcccceeeeeeeecccCCCchhhhccCcccCCceec--ccccCccccceeee Confidence 887642 222 23 343333333 4567999999999999999999999888542211 00111122222323 Q ss_pred CceEEEEEeCCeEEEEeCCCcEEEEE-ccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeecccCCCCCCccEEE Q lcl|Aclame:pro 74 FEQYFVVFTGEDIKVFDLDGKEYQVR-GDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALI 152 (801) Q Consensus 74 ~~~y~l~~~~~~irv~~~~g~~~~v~-~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (801) .+.-+..+.++..++|-. ++ +..+ +.+.+.+|-+|..+... |.+.-- T Consensus 76 ~~~tl~~~~~~~w~~~~~------v~v~~~p----------va~d~~~~Rvy~t~~~~-p~~~~~--------------- 123 (396) T protein:vir:10 76 LGDQWGKVDPHSWTFEPL------AQIGEGD----------LSHEVLNNRVCVAGTAG-IFTYDG--------------- 123 (396) T ss_pred CCceEEEEeCCeEEEEee------eeeccCc----------hhccccCCeEEEEcCCC-ceeeeC--------------- Confidence 333344444444444310 11 1122 33445667777776443 332110 Q ss_pred EeccCccceeEEEEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeC Q lcl|Aclame:pro 153 NVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAP 232 (801) Q Consensus 153 ~v~~g~y~~~y~v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 232 (801) ...|.+.+.. | +.+-... ... .+ ......+. ++ ++... T Consensus 124 -------~~~y~L~vp~--------P--~~a~~~a--~~G----sl----~~~~~~Y~---------~t------~V~~~ 161 (396) T protein:vir:10 124 -------AQAERLTLDT--------P--APPLLVA--GAG----SL----SQGTYGAA---------VA------WLRGP 161 (396) T ss_pred -------CcceecCcCC--------C--ccccccc--ccC----cc----CCceEEEE---------EE------EEecC Confidence 1112222211 1 1000000 000 00 00000000 00 00000 Q ss_pred CC---cceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeee Q lcl|Aclame:pro 233 NN---DNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTH 309 (801) Q Consensus 233 ~~---~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~ 309 (801) +- ....+.....++ |-.+.+....+.+.+...+.-...+|. ..- T Consensus 162 gEEs~p~~~S~~v~~~g------------------------g~~vtl~~~~~~~i~~~RiYrS~~~G~---------~~~ 208 (396) T protein:vir:10 162 QESAPSLIAFAEVTDAG------------------------ALEVTFPLCLDASVTGARLYLTRANGG---------ELL 208 (396) T ss_pred CCcCcccccccccCCCC------------------------CcEEEEEcccCCCcceEEEEEeCCChh---------hhh Confidence 00 000000111111 111111111111111111111111111 000 Q ss_pred EeeccccEEEEeccCCeEEEeecccCcccCCCccccCCchhcCCCceEEEEEcCceEEecCCEEEEEecCCccccc-ccc Q lcl|Aclame:pro 310 LHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFF-PAS 388 (801) Q Consensus 310 ~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~-~~s 388 (801) + .+-+| ....+|.+...+|...-.-..-=-|+|.. .-+++|.+||+++.++.||+|+..-++=+. +.. T Consensus 209 l-~aE~~-----a~~~s~vlPs~~w~gpP~~~~gL~pmP~G-----~~~A~faGRi~~A~Gn~V~FSEp~~Ph~~~~~~~ 277 (396) T protein:vir:10 209 L-AGDYP-----LGAATVILPTLPELGRPAQFRHLSPMPTG-----KHLAYWRGRLLIARANVLRFSEALAYHLHDERYG 277 (396) T ss_pred h-eehhc-----cceeeeeeecCCCCCCCccccccccCchh-----HhhhhhcceEEEEeCCEEEEecCCCCceecchhc Confidence 0 00011 12233444555675432111111222221 037899999999999999999999763221 111 Q ss_pred ccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCcc--ccccceEEEEEeeeccc---------CCCC Q lcl|Aclame:pro 389 VSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDI--LSSRSVGLNLTTQFDVQ---------DRAR 457 (801) Q Consensus 389 ~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~~~~~~~--lTP~~~~i~~~s~~~~~---------~~v~ 457 (801) -++ . ...|.-+.+...+|+++|+++-|.+.|.++ ++.+.....+- .-|+ +.-. T Consensus 278 ~~~------------~--~~~Iv~lapv~~gL~Vgt~~~~y~~~G~dP~sms~~~l~~~~p--vp~S~v~~p~~~~s~rs 341 (396) T protein:vir:10 278 FVQ------------M--PQRITFVQPVDGGIWVGQVDHVAFLDGADPASLSVSRRASRAP--VPGSAVLVPAEVVGTNA 341 (396) T ss_pred cCC------------C--CCceEEEEEecCeEEEEEcCcEEEEEcCChhHcceeecccCCC--cccchhcccchhhhccc Confidence 111 1 123555677788999999999999998653 44433321110 1122 1223 Q ss_pred cEEeCCeEEEEecCCCeEEEEEEeeeeecccceehhhHHHHHHHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeee Q lcl|Aclame:pro 458 PHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLY 537 (801) Q Consensus 458 Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~ 537 (801) .+..|..++|.++.|-. -- ..+. ....++ ...+.+. ...++. ++. . |++.++ ++. T Consensus 342 ~~~~~~~~lwas~dGl~----~g--~~~G----~v~~l~---~~~i~p~-~~~A~~-------~~~-~-drRy~~--~~~ 396 (396) T protein:vir:10 342 SPDGSPVAVWLAENGYV----MG--TSSG----AIAEVH---AGVLAGI-TGRAGT-------SVV-F-DRRLLT--AVS 396 (396) T ss_pred ccccCcEEEEccCCcEE----EE--cCCc----eeeeec---ccccCCC-cccceE-------EEe-e-cCeEEE--EeC Confidence 34568899999999832 11 1111 111121 1222221 111110 011 1 122221 110 No 34 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=95.75 E-value=0.0015 Score=36.03 Aligned_cols=655 Identities=8% Similarity=0.018 Sum_probs=187.8 Q ss_pred eEEEE--EEeCCCceEEEEEeCCeEEEEeCCCcEEEEEccCccccccCCccceEEEEEcCEEEEecCCeeeeEEeeeccc Q lcl|Aclame:pro 64 PYVHL--INRDEFEQYFVVFTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNL 141 (801) Q Consensus 64 ~~~~~--f~~~~~~~y~l~~~~~~irv~~~~g~~~~v~~~~~y~~~~~~~~~l~~~q~~D~~~i~~~~~~~~~~~~~~~~ 141 (801) |++.. =+|.+.|=--+..+...+.=|. +|....++.-...-.-...+.-.+++-. +.+++-+. .+. +. T Consensus 1 m~i~~~q~sF~~GElsP~l~gR~Dl~ry~-~q~~~~~N~~~~~~GGl~rRpGt~fva~-----~~~~~g~~-rLi---pf 70 (823) T protein:vir:95 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQ-VALRKCDNFIVRQYGGVENRPGTRFVGA-----AKYPNRKC-RLI---PF 70 (823) T ss_pred CcceeechhccCceechheeccchHHHHH-HHHhhhhCcEeeecCCceecCchhhhhh-----hcCCCCCe-eEE---EE Confidence 11111 1222222111122222211111 1111111110000000000011111110 00111100 011 00 Q ss_pred CCCCCCccEEEEeccCccceeEE----EEeCCceEEEEEeecCCCcccceeeehhhHHHHHHHhhhhcccceeeeecccc Q lcl|Aclame:pro 142 PGFKDQGDALINVRGGQYGRRLS----IEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNK 217 (801) Q Consensus 142 ~~~~~~~~~~~~v~~g~y~~~y~----v~i~~~~ta~~ttp~~t~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~ 217 (801) . ++. ...++-+-+..|=+-|+ +...+. ..+.++.+...+....+...++|+.+...+....+....+...+. T Consensus 71 ~-~s~-~q~y~Lefg~~~irV~~~~g~vv~~~~--~~~ev~tPy~~~~l~~Lr~~qsaD~~fivh~~~~p~~L~r~~~~~ 146 (823) T protein:vir:95 71 Q-FST-VQTYALEFGHQYMRVIKDGALVLNSSN--VIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDN 146 (823) T ss_pred E-eCC-CcEEEEEEcCCeEEEEeCCcEEEecCC--ceeEEecccccccccceeEEEeccEEEEEcCCccceEEEecCCCC Confidence 0 000 11111111111211111 000111 112222223333344455555555554444444444444445555 Q ss_pred EEEEecCceEEEEeCCC-cceeEEEEec-CCCcceeeeeeeeccccccccccccCCeEEEEeecCCCCcceEEEEEEcCC Q lcl|Aclame:pro 218 WRFNVGPGFIHILAPNN-DNVWGLQTKD-GYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNR 295 (801) Q Consensus 218 ~~~~~~~~~~~i~~~~~-~~~~tit~~d-g~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~ 295 (801) |++...... ...... ....++.... +..+... .+...+.......|....+........ T Consensus 147 w~l~~~~~~--~gp~~~~~~~~t~~v~~~~~~~~~t------~ta~~~~~~~d~vg~~~~l~~~~~~~~----------- 207 (823) T protein:vir:95 147 WQLVDVVTK--NGPFEDINIDESLTVYASASTGTIT------LTASASIFGAEQVGKLFYLEQPAVDSV----------- 207 (823) T ss_pred ceEEEEEEe--ccccccccccceeEEeccccCceeE------EeecccccchhhccceEEEecccccee----------- Confidence 544321100 000000 0000111110 0000000 000000000000121111110000000 Q ss_pred eEEEE--EeccceeeeEeeccccEEEEeccCCeEEEeec---ccCc-ccCCCccccCCchhcCCCceEEEEEcCceEEec Q lcl|Aclame:pro 296 KVWVE--TIGWNTRTHLHYHTMPWALVRASDGNFDFKYL---EWGA-RTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS 369 (801) Q Consensus 296 ~~W~e--~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~---~w~~-r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~ 369 (801) ..|.. ....+...... ...+........++...... .|.. ...+++...-... ++...=+.. T Consensus 208 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~g~~- 275 (823) T protein:vir:95 208 PVWETSKSTSIGDIRRAD-SNYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWE----------YLHSGFGIA- 275 (823) T ss_pred eecceeeeecccceEEec-ccceeeeeccccceeecccCCcceEEeceecccccceeEEE----------EEeCCcceE- Confidence 00100 00000000000 00000000000011000000 0000 0000000000000 000000000 Q ss_pred CCEEEEEecCCcc--ccccccccccCCCccEE-----EEEcCCcceeeeeeeecCCcEEEEecCc--EEEEeC--Cc--c Q lcl|Aclame:pro 370 GENIILSRTSKYF--NFFPASVSNYSDDDPID-----VAVSHDRVSTLKYAVPFSEELLLWSDQA--QFVLTA--SD--I 436 (801) Q Consensus 370 ~~~v~~S~~gd~~--nF~~~s~~~~~D~D~i~-----~~~~~~~~~~i~~~v~~~~~L~l~t~~~--q~~~~~--~~--~ 436 (801) ..+-.-+.+++-. -|.++.... ..+...+ +......+. .+.-++.-|+++...+ |+++-+ ++ - T Consensus 276 ~~t~v~~~~~~~~~~~~~~~~~~~-~~~~t~~~~~~~~~~~~g~Ps---~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~n 351 (823) T protein:vir:95 276 RITAVNGTTATAEVISYIPSQVVG-EDNASYKWAKYAWNSVNGYPG---TVVYYQQRLYFAASTAFPQTIWASRTGDYKD 351 (823) T ss_pred EEEeecceeeeceEeeeecccccc-CCcCCccccccccCcCCCCcc---EEEEEeceEEEEEcCCCCcEEEEeccCCccc Confidence 0000001111100 011111000 0011111 000011111 1222333466555432 555422 11 2 Q ss_pred ccccce-----EEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeeccc--ceehhhHHHHHHHhcCCCeEE Q lcl|Aclame:pro 437 LSSRSV-----GLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVSS--VKNAEDMTAHVPNYIPNGVFS 509 (801) Q Consensus 437 lTP~~~-----~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~--~~~~~dls~~~~~~~~g~v~~ 509 (801) +.|+++ .|....+-.-.+.++=+.-.+.++..+.++++ .+ .....+ ++....+..+ ..+ | +.. T Consensus 352 F~~~~~~~DdD~I~~~~s~~~~~~i~~~v~~~~Lli~t~~~e~----~l--~~~~~~~lTP~~~~~~~~-s~~--g-~~~ 421 (823) T protein:vir:95 352 FGKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEY----VI--TGDQNKVLTPSSFAFSSQ-GSN--G-SSN 421 (823) T ss_pred cccccCCCCCCcEEEEEcCCcceEEEEEeecCcEEEEecCcEE----EE--EcCCCcccceeeEEEEEe-ecc--c-ccc Confidence 333221 12222111111223333344556666666643 21 111111 2222222211 111 1 111 Q ss_pred EEEcCCCCeEEEEEEcCCCEEEEEEeeeCCC---ceEEEEEEeeecCCc-eEEEEEEEc-CCEEEEEEE----------e Q lcl|Aclame:pro 510 ISGTTAENFVAILTSGAPNRVYIYKFLYIDE---EIRQQSWSHWDFGDN-VTVFAAQVI-NSTMTVLMS----------N 574 (801) Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~---e~~~~aW~~w~~~g~-~~~~~~~~~-~d~ly~vv~----------r 574 (801) +.-...-+.++| +......+.-|.|-.... -+++.-=+.|-+.+. +..+|.... ...+|++.. | T Consensus 422 ~~Pv~vg~~~~F-v~~~g~~vre~~~~~~~d~~~~~dlT~~a~hl~~~~~i~~~a~~~~p~~~~~~v~~dG~l~~~ty~~ 500 (823) T protein:vir:95 422 VPPIAVANIALF-VQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFCIRDDGKLLVMTYLR 500 (823) T ss_pred ccceEeCCeEEE-EecCCCEEEEEEEeeecCceecchhhhhhhhhcCCCceEEEEEecCCCeEEEEEecCCcEEEEEEec Confidence 111122233343 333334555555432211 111222224444332 111111111 112222211 1 Q ss_pred CCC----------EEE------------EEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccc------ Q lcl|Aclame:pro 575 EHA----------VWM------------GRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLS------ 626 (801) Q Consensus 575 ~~~----------~~~------------~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~------ 626 (801) +.+ +.. +-|.+..++++.....|.++++..... .....+..++..+....+ T Consensus 501 ~q~v~aW~~~~~~g~~~~~~~i~~~~~d~l~~~v~R~i~g~~~~yiE~~~~~~~~-~~~~~~~lD~~~s~~g~~~~~~~~ 579 (823) T protein:vir:95 501 DQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFT-SDEDAFFVDSGLSYDGRNTSDRTM 579 (823) T ss_pred ccceeeeEEEecCCcEEEEEEecCCCCCEEEEEEEeccCCeEEEEEEeeccccCC-CccceeEEEEEEEeecCcccceee Confidence 110 000 012233344555666666666654321 112223333333222111 Q ss_pred ----cccCCcccCceEEEEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccce Q lcl|Aclame:pro 627 ----TIYGMNFTKGRVSVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTAT 702 (801) Q Consensus 627 ----~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~ 702 (801) ....+.|++++++.+ +||.+++.. ..++.++++ ++++.+++|++|++.++++++.+..... .. T Consensus 580 ~l~~g~~~l~~l~g~~v~~-adg~~~~~~------~v~g~i~l~--~~~~~~~vGl~~~~~i~~~~~~v~~~~a----~~ 646 (823) T protein:vir:95 580 TITGGSGEWDYLAEYTISV-SGGAYFTSS------DVGAQLQFP--YTGADPDTGYEVSKELRCDIISVTSNTA----VV 646 (823) T ss_pred EecCCCCcccccCceEEEe-cCcceECCc------cceeEEEeC--cCCCccccccceEEEEEEeeceeeCCce----EE Confidence 123488999999976 888877532 225678886 6788899999999999999888752211 11 Q ss_pred EEeeeEEEEEEEEEeecceeEEEEeCCCCcceeeeeccceeccccccCCccc--cccceEEEEEeeecceeEEEE---EE Q lcl|Aclame:pro 703 EDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSN--IGTGQYRFPVVGNAQTNTVTI---ES 777 (801) Q Consensus 703 ~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~tg~~~vp~~~~~~~~~v~I---~~ 777 (801) .... ++....++...+.+ ..+....-.-.-...++.+.-..+..-.|+ ...|.+++|.. ...+.+-| .- T Consensus 647 ~~~~--r~v~a~l~~~~t~~--~~~~~~~~~gL~hleg~tv~v~~dg~~~~~~~v~~G~vtl~~~--~~~v~vGl~~~~~ 720 (823) T protein:vir:95 647 VRAN--RNVPPSLRNVATTN--WQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGAVTLESP--GAVVHIGLPITAE 720 (823) T ss_pred EccC--Ccccceeeeeeccc--cccccceeeeccccccceEEEEEcCeeeCCeEecCCEEEecCC--CCEEEEeecceee Confidence 1111 22222222222211 111000000011122222211111110122 23566666532 23333322 11 Q ss_pred CCCCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 778 DASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 778 ~~P~P~tvlai~weg~y~~r~rrv 801 (801) -.|||..+. ++|.---|.||| T Consensus 721 ~~~l~~~~~---~~g~~~g~~~ri 741 (823) T protein:vir:95 721 FETLDININ---GQETLLDKKQVI 741 (823) T ss_pred EEecchhcC---CCcccCCceeEE Confidence 256776644 457777889998 No 35 >protein:vir:108312 Length: 458 # NCBI annotation: hypothetical protein # Family: family:all:1540 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552278;genbank:gi:160700603;genbank:GeneID:5758828 Probab=83.76 E-value=0.066 Score=27.06 Aligned_cols=436 Identities=11% Similarity=0.126 Sum_probs=170.9 Q ss_pred HHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCcceeEEEEecCCCcceeeeeeeeccccccccccccC--- Q lcl|Aclame:pro 194 IAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPD--- 270 (801) Q Consensus 194 ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~--- 270 (801) ++.. ++. .+....+.. .+.... .+..+... .+++.+...+...- ....+.++|+.... T Consensus 1 m~~~---~ip--~gsy~a~~~--~~daq~---~VN~yp~~--------~e~g~ss~~l~~tP-Gl~~f~~~~~~~~~g~~ 61 (458) T protein:vir:10 1 MVQR---QIP--LVATTAEGD--VSGQEI---LVNVYPRK--------SDGGKYPFTLRHTP-GLAFFCELPTFPVMAMH 61 (458) T ss_pred Ccee---eec--eeeeecccc--ccccee---eeeeeeec--------ccccccccceEecC-CceeeecCCCCceeeEE Confidence 0000 000 000000000 000000 00000000 00111111111111 11112334333221 Q ss_pred ---CeEEEEeecCCCCcceEEEEEEcCCeEEEEE---eccceeeeEeeccccEEEEeccCCeEEEeecccCcccCCCc-c Q lcl|Aclame:pro 271 ---GYIVKIVGDTSKTADQYYVRFDLNRKVWVET---IGWNTRTHLHYHTMPWALVRASDGNFDFKYLEWGARTVGDD-T 343 (801) Q Consensus 271 ---g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~---~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~-~ 343 (801) |....+++ .+=|-| .++++-+|. ++.|...-.++++ ..++..+..-|.+. .+++. . T Consensus 62 ~~~g~ly~v~g-----~~LY~V---~~~~~~~~iG~i~gsg~VsMa~ng~--q~vi~~G~~gY~yd-------~at~~~~ 124 (458) T protein:vir:10 62 QNGSRAFAVTP-----RDMYEI---SKDGTYKRLGSVDFKGRVVMEDNGK--QIVMVDGEKGYYYD-------SETEIVQ 124 (458) T ss_pred ecCCEEEEeeC-----ceEEEE---eCCceEEEEecccCceeEEEeeCCc--EEEEEECCeEEEEe-------ecccEEE Confidence 22222211 111111 223333332 2233333333332 11111111111111 11110 1 Q ss_pred ccCCchhcCCCceEEEEEcCceEEec--CCEEEEEecCCccccccccccccCCCccEEEEEcCCcceeeeeeeecCCcEE Q lcl|Aclame:pro 344 TNPYPSFTGQTINDIFFFRNRLGFLS--GENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELL 421 (801) Q Consensus 344 ~np~psf~g~~p~~v~f~q~RL~~~~--~~~v~~S~~gd~~nF~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~ 421 (801) .+..+.|. .+..|.|..+|++|.. ...++.|...| . --||+++.-+..+++.|.-++...+.|+ T Consensus 125 ~i~d~~~~--~~~~v~~~dGy~V~~~~g~~~~~is~L~d------~------s~d~l~fa~Ae~~pD~iv~i~~~~~~i~ 190 (458) T protein:vir:10 125 EIKAEGFY--PASTVTYQDGYFIFDRKGTGQFFISELLD------V------AFDPLDFATAEGQPDPLLAVLSDHREVF 190 (458) T ss_pred eccCcccc--CcceEEEeCcEEEEEeeCCCEEEEEecCc------c------eeCcceeeeecCCCCceEEEEeeccEEE Confidence 12223342 3889999999999884 45567775444 1 1579999999999999999999999999 Q ss_pred EEecCcE--EEEeCCcccc--ccceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeecccceehhhHHH Q lcl|Aclame:pro 422 LWSDQAQ--FVLTASDILS--SRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVSSVKNAEDMTA 497 (801) Q Consensus 422 l~t~~~q--~~~~~~~~lT--P~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~ 497 (801) +|.+..- |..+|...+. .... ... ..+|++.-.=..+|++++|+...+ .|+.. ++|+++-||- T Consensus 191 ~fG~~TiEvw~ntG~a~fpy~r~~g-a~i--~~Gcaa~~sv~~~~~t~~~l~~d~---~Vy~l-------~g~~~~rIST 257 (458) T protein:vir:10 191 MFGQETIEVWYNSGAADFPFERNQG-AFI--EKGIGAPYSVAKTNNTVYFIGSDL---MIYQI-------TGYTPVRIST 257 (458) T ss_pred EEeccceEEEEecCCCCcceeeccc-cee--eecccCcchhhhhCceEEEEcCCe---EEEEe-------cCceeEEeeC Confidence 9998875 7777764222 2111 111 246777666689999999999875 34443 3555665554 Q ss_pred HH-HHhcCCCeEEEEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCceEEEEEEEcCCEEEEEEEeCC Q lcl|Aclame:pro 498 HV-PNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMSNEH 576 (801) Q Consensus 498 ~~-~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~ 576 (801) |+ ++.|.. .+-.+...+-...+...+|+++|- .. .|+ |.+|..-. +|.+.+ . T Consensus 258 ~aIE~~i~s-------y~~~da~a~t~~~eGH~fy~LtfP-~a------~~T-w~yD~~t~----------~Wher~--S 310 (458) T protein:vir:10 258 HAVEQTLKG-------VNLSDAFAYTYQSEGHLFYVLTIP-GK------NLT-WCYDISSG----------SWHVRQ--S 310 (458) T ss_pred HHHHHHHhc-------CChhheEEEEEEecCeEEEEEECC-CC------Cce-eEEecccc----------cceeec--c Confidence 43 333322 112222222223344556666652 10 011 22322110 121110 0 Q ss_pred CEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCceEEEEecCCceeeccccccc Q lcl|Aclame:pro 577 AVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSVVFPDGKIVEIDQPING 656 (801) Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~~v~v~~dG~~~~~~~~~~~ 656 (801) +..+ ..+..+...+.... +.| ++++|..... .+..+. T Consensus 311 -g~~~----------------~~Ra~~~v~~~g~~----------------~vG-D~~ng~ly~l-d~~~~t-------- 347 (458) T protein:vir:10 311 -YQFD----------------RHVSNNSIYFDQKT----------------LVG-DFQNGRIYIM-ADNYYT-------- 347 (458) T ss_pred -CCCC----------------ceEEEEEEEeCCeE----------------EEE-EcCCCeEEEE-cccCcC-------- Confidence 0000 01112211110000 000 1112211111 000000 Q ss_pred cccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEeecceeEEEEeCCCCcceee Q lcl|Aclame:pro 657 WSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFIIRVNNLSREFIY 736 (801) Q Consensus 657 ~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~tg~~~~~v~~~~~~~~~ 736 (801) + -|-+.+..+.++ .+. + ...|++++++.|.+. ||--.+.-+......-. T Consensus 348 -----------d-------~g~~i~~~~~~p--~~~----~------~~~rl~~~~~el~~~-tGvg~~~~~~~~p~~~l 396 (458) T protein:vir:10 348 -----------D-------DGDPVVREFILP--VVN----N------GREFLTVDSLELDLS-SGVGLTVGQGSDPELRV 396 (458) T ss_pred -----------C-------CCceeeeeeecc--cee----C------CCCeEEEEEEEEEEe-cceeeeeCCCCCceEEE Confidence 0 133333333332 221 1 113445555555432 22111100000000001 Q ss_pred e---eccceeccc-cc-cCCccccccceEEEEEeeecceeEEEEEECCCCCEEEEEEEEEEE Q lcl|Aclame:pro 737 T---MAGARLGSD-NL-RVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGN 793 (801) Q Consensus 737 ~---~~~~~~~~~-~~-~~~~~~~~tg~~~vp~~~~~~~~~v~I~~~~P~P~tvlai~weg~ 793 (801) . .-+..++.. .. ..|++-.....+.+.=.|..++-.++|+-..|.|.+|+++..+-+ T Consensus 397 ~~S~d~g~~~s~~~~~~~lg~~gey~tr~~~~rlG~ar~rvf~v~~s~p~~~~l~ga~~~~r 458 (458) T protein:vir:10 397 YFSKDNGNEYSQNFKVGKIGRKGEFLTRAKVNRFGCARQFTFKVEISDPIPVDIGGAWVEVR 458 (458) T ss_pred EEeeCCCcccchhHHHhhcCCcchhhhhhhhhhhccCcceEEEEEEecchhhcceeeeEEeC Confidence 0 111111111 00 123332233333332235566666999999999999999999888 No 36 >protein:vir:105525 Length: 472 # NCBI annotation: phage DNA stabilization protein # Family: family:all:1540 # MgeID: mge:1463 # MgeName: phiSG1 # Cross-refs: genbank:acc:YP_516194;genbank:gi:89885997;genbank:GeneID:3964385 Probab=52.76 E-value=0.55 Score=22.03 Aligned_cols=425 Identities=11% Similarity=0.033 Sum_probs=152.0 Q ss_pred eehhhHHHHHHHhhhhcccceeeeeccccEEEEecCceEEEEeCCCcceeEEEEecCCCcceeeeeeeeccccccccccc Q lcl|Aclame:pro 189 VDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINA 268 (801) Q Consensus 189 ~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~ 268 (801) .-.-+++ |...+..+ . .+......-+-+.|..-....+ ......+.-| ...+.++++.+ T Consensus 1 m~~~q~p--l~~g~~~~------~--~~~~~~~~lpvN~y~~p~~~~~--ss~~lr~~PG---------~~~~~~~~g~~ 59 (472) T protein:vir:10 1 MAIMQLP--LLRGLGKA------R--DDADYIDALPVNMLATPKPVLN--ASGYLRSFPG---------ITHKAEVAGVS 59 (472) T ss_pred CCceeee--cccccccC------c--cccCceeeeeeeeeeccccccc--cceeecccCC---------ceeecCCCccc Confidence 0000000 00000000 0 0000111111111111000000 0001111111 11112222211 Q ss_pred c-------CCeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEEEEeccCCeEEE-----eecccCc Q lcl|Aclame:pro 269 P-------DGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALVRASDGNFDF-----KYLEWGA 336 (801) Q Consensus 269 ~-------~g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~-----~~~~w~~ 336 (801) . +|....|.+. .=|.+ ...|-+.++.|...--+....+..++.....-|.. ...+|.. T Consensus 60 RG~~~~~~~~~lY~V~G~-----~Ly~v-----~~~vG~iagsg~VsMa~~~~~q~v~v~g~~~~y~y~g~~~t~~~~~~ 129 (472) T protein:vir:10 60 RGVQYNTHEKTVYRGLGN-----QLYKG-----HKPIADLAGKGRISMAFSRNSQAVVAAGKMTLYRYDGTVKTLENWPK 129 (472) T ss_pred ceeEeeeeCCeEEEEecc-----eEEEE-----EeeeeeecccccEEEEecCCceEEEEecceeEEEeccchhhhhhccc Confidence 1 2222222221 11222 11244444444443323333333333322111211 1112221 Q ss_pred ccCCCccccCCchhcCCCceEEEEEcCceEEecC--CEEEEEecCCccccccccccccCCCccEE-EEEcCCcceeeeee Q lcl|Aclame:pro 337 RTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSG--ENIILSRTSKYFNFFPASVSNYSDDDPID-VAVSHDRVSTLKYA 413 (801) Q Consensus 337 r~~gd~~~np~psf~g~~p~~v~f~q~RL~~~~~--~~v~~S~~gd~~nF~~~s~~~~~D~D~i~-~~~~~~~~~~i~~~ 413 (801) .. ..+.+.| ..+..|+|..+|++|.-| +.++.|..-|-.- .|+++ +..+..+++.|.-+ T Consensus 130 ~~-----~it~~dl--~~~~~v~~~dGyfV~~~~gt~~~~iS~L~d~s~-----------~~~~~~FatAE~~pD~Ivgi 191 (472) T protein:vir:10 130 EK-----KYTQYDI--GNVRDMCHLRGRYVWCKDGSDIFGVTDLEDESH-----------PDRYRALYRAESQPDGIIGI 191 (472) T ss_pred cc-----cCCcccc--CCceeEEEeCceEEEeecCCceEEEeecCCccc-----------CCcccceeeecCCCCceEEE Confidence 11 1111222 258889999999988853 3344665544221 23454 56677788888889 Q ss_pred eecCCcEEEEecCcE--EEEeCCcccc--c--cceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeecc Q lcl|Aclame:pro 414 VPFSEELLLWSDQAQ--FVLTASDILS--S--RSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRYYAVQDVS 487 (801) Q Consensus 414 v~~~~~L~l~t~~~q--~~~~~~~~lT--P--~~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~ 487 (801) +...+.|++|.+..- |..+|...++ . .......+ .+|++.=.=..+|++++|+.+....-.+.. .. T Consensus 192 ~~~~~~i~lfG~~TiEvw~ntG~a~fpf~r~~~~pg~~iq--~Gcaa~~sv~~~~~s~~~l~~d~~g~~~V~------~~ 263 (472) T protein:vir:10 192 DSWRDFIVCFGASTIEYFSLTGAADGQSAIYAAQPALMVE--KGIAGTHCKTRLGDAHVIISHQATGAPSVF------LI 263 (472) T ss_pred EeeccEEEEEeccceEEEEecCCCCcceeeeccCccceee--ecccCchhhhhhCceEEEEecCCCcceEEE------Ec Confidence 999999999998875 7777764222 1 12233344 477776666899999999988753222221 22 Q ss_pred cceehhhHHH-HHHHhcCCC----eEE--EEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecC-CceEEE Q lcl|Aclame:pro 488 SVKNAEDMTA-HVPNYIPNG----VFS--ISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFG-DNVTVF 559 (801) Q Consensus 488 ~~~~~~dls~-~~~~~~~g~----v~~--~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~-g~~~~~ 559 (801) ++|+++-||- -+++.|..- +.+ +.+.+.+...++...--+. -+||.- -.+.++.++.|-+-.+. ...+.. T Consensus 264 ~g~q~~rIST~aIE~~i~~y~~~e~~dA~~~s~~~eGH~fy~LtfP~~-Tw~yD~-at~~~~~~w~~~~~g~~~~~~Ra~ 341 (472) T protein:vir:10 264 NQAQATSIATATIEKILRSYTHDELASAVMETVRFDSHELVLIHLSRQ-VLCYDA-AANQNGLQWSLLKTGFYHAPYRGI 341 (472) T ss_pred cCceEEEecCHHHHHHHHhCCcccccceeEEEEEeCCeEEEEEEcCCe-eEEEec-cCCccceeeeeeecCCccCceEEE Confidence 4566776643 344444432 222 3333444443333333333 334432 12233444444333322 233333 Q ss_pred EE----------EEcCCEEEEEE---EeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccc Q lcl|Aclame:pro 560 AA----------QVINSTMTVLM---SNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLS 626 (801) Q Consensus 560 ~~----------~~~~d~ly~vv---~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~ 626 (801) |+ +..+..||.+- ...++-.++++...+--.+... + .+|-.+.. T Consensus 342 ~~~~~~g~~~vGD~~ng~l~~ld~~~~td~g~pi~~~~~tp~~~~~n~---R-vfd~el~~------------------- 398 (472) T protein:vir:10 342 DFMFADHHLTCGDKNDSLLGQLDFASSAQYEKPQEHVLYTPLFKADNA---R-VFDFELEA------------------- 398 (472) T ss_pred EEEEeCCeEEEEEcCCCeEEEEcCcCcCCCCceeEEEeeccceecCCC---e-EEEEEEEe------------------- Confidence 32 22244555531 2222333333322211111111 1 11211111 Q ss_pred cccCCcccCceE-EEEecCCceeec-cccccccc--cCcEEEEcCCccC-ceEEEEEeeeEEEEeCCeeEeccCCCCccc Q lcl|Aclame:pro 627 TIYGMNFTKGRV-SVVFPDGKIVEI-DQPINGWS--SDPMLRLDGNQEG-QVVYIGFNIPFTYTFSKFLIKKTAEDGSTA 701 (801) Q Consensus 627 ~~~gl~~l~g~~-v~v~~dG~~~~~-~~~~~~~~--~~~~~~l~~~~~~-~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~ 701 (801) ..|....+++. ..+-.||...-. .......- ...++.. .+-+ ..=-||+. .++...-|... T Consensus 399 -~tGvg~~~~~v~L~wSddg~~~~~~~~~~~~g~~~~~~r~~w--~RlG~ar~~vgf~--~rv~~s~pv~~--------- 464 (472) T protein:vir:10 399 -STGVAHIADRLFLSATADGLHFGREQMINQNAPFAYDRRILW--RRMGRVRKNLGFK--VRVITSSPVTL--------- 464 (472) T ss_pred -eCCcCccCceEEEEEeccccccchhHHHhhcCccchhheeee--heeeccccccceE--EEEEEeccccc--------- Confidence 11233333332 222233322110 00000000 0000000 0000 00001221 12222222211 Q ss_pred eEEeeeEEEEEEEEEeecceeEEEEeC Q lcl|Aclame:pro 702 TEDIGRLQLRRAWVNYEDSGAFIIRVN 728 (801) Q Consensus 702 ~~~~~rl~l~~~~v~~~~tg~~~~~v~ 728 (801) ..+.+.|+ T Consensus 465 -------------------~~~~a~~e 472 (472) T protein:vir:10 465 -------------------SGCQIRME 472 (472) T ss_pred -------------------ccceeeeC Confidence 11112222 No 37 >protein:vir:2109 Length: 472 # NCBI annotation: head completion protein # Family: family:all:1540 # MgeID: mge:46 # MgeName: P22 # Cross-refs: genbank:acc:NP_059633;genbank:gi:9635541;genbank:GeneID:1262840 Probab=45.12 E-value=0.78 Score=21.17 Aligned_cols=426 Identities=11% Similarity=0.034 Sum_probs=137.6 Q ss_pred EEEEecCceEEEEeCCCcceeEEEEecCCCcceeeeeeeeccccccccccccCCeEEEE------eecCCCC-cceEEEE Q lcl|Aclame:pro 218 WRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKI------VGDTSKT-ADQYYVR 290 (801) Q Consensus 218 ~~~~~~~~~~~i~~~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i------~~~~~~~-~~~y~v~ 290 (801) ....+.+ +...-..........+.-- -.|.+....+....- --.|..|...+. .+.-.++ .+..|+. T Consensus 1 m~~~q~P----l~~g~~~~~~~~d~~~~~p-VN~~a~~~~~~~s~~-~lr~tPG~~~~~~~~g~~RG~~~~t~~~~ly~V 74 (472) T protein:vir:21 1 MPIQQLP----MMKGMGKDFKNADYIDYLP-VNMLATPKEILNSSG-YLRSFPGITKRYDMNGVSRGVEYNTAQNAVYRV 74 (472) T ss_pred CceEEee----ccccccccccccceeeeee-eeeeeeccCCcccce-eeeecCCcceeccCCCceeeeeecccCCeEEEE Confidence 2111111 0000000000000111000 000000000000000 000112221111 1111011 1122221 Q ss_pred EEcCCeEEEEEe------ccceeeeEeeccccEEEEeccCCe--EEEeecccCcccCCCccccCCc-hhcC---CCceEE Q lcl|Aclame:pro 291 FDLNRKVWVETI------GWNTRTHLHYHTMPWALVRASDGN--FDFKYLEWGARTVGDDTTNPYP-SFTG---QTINDI 358 (801) Q Consensus 291 ~~~~~~~W~e~~------~~~~~~~~~~~t~p~~lv~~~~~t--~~~~~~~w~~r~~gd~~~np~p-sf~g---~~p~~v 358 (801) .++.-|+-.+ +.|.+.--+..+.. .+...+.. |+.....+... +.|.. .|.+ ..+..| T Consensus 75 --~G~~LY~v~~~~G~i~gsgrVsMa~n~~~~--~v~~~~~~~~Y~~~~~~~t~~------~~~~d~~f~~~dl~~~~dv 144 (472) T protein:vir:21 75 --CGGKLYKGESEVGDVAGSGRVSMAHGRTSQ--AVGVNGQLVEYRYDGTVKTVS------NWPADSGFTQYELGSVRDI 144 (472) T ss_pred --eCCceEEEeeeeeeecccccEEEeeCCeEE--EEEECCceeEEEEecchhhhh------cccCccccccccccceeEE Confidence 2333343221 11111111111111 01111111 11111111110 01111 1221 234579 Q ss_pred EEEcCceEEecC--CEEEEEecCCccccccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcE--EEEeCC Q lcl|Aclame:pro 359 FFFRNRLGFLSG--ENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQ--FVLTAS 434 (801) Q Consensus 359 ~f~q~RL~~~~~--~~v~~S~~gd~~nF~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q--~~~~~~ 434 (801) +|+.+|++|.-+ +..+-|..-|-+..++ =++ ++-+..+++.|.-++...+.|++|.+..- |..+|. T Consensus 145 ~f~dGyfV~~~~gt~~f~is~l~d~~~~~~--------y~~--FatAE~~pD~Iv~i~~~~~~l~lfG~~TiEvw~ntG~ 214 (472) T protein:vir:21 145 TRLRGRYAWSKDGTDSWFITDLEDESHPDR--------YSA--QYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGA 214 (472) T ss_pred EEecceEEEccCCcceeEEecCCCCccccC--------Ccc--ceeeccCCCceEEEEeeccEEEEEeccceEEEEecCC Confidence 999999988863 3334344444221110 011 45567778888889999999999998875 777765 Q ss_pred ccccccceEEEEEe----eecccCCCCcEEeCCeEEEEecCCCeE-EEEEEeeeeecccceehhhHHHH-HHHhcCCC-- Q lcl|Aclame:pro 435 DILSSRSVGLNLTT----QFDVQDRARPHGVGRNVYFSSPRASFT-SINRYYAVQDVSSVKNAEDMTAH-VPNYIPNG-- 506 (801) Q Consensus 435 ~~lTP~~~~i~~~s----~~~~~~~v~Pv~vg~~v~fv~~~g~~~-~v~~~~~~~~~~~~~~~~dls~~-~~~~~~g~-- 506 (801) . ++..+-...++ ..+|++.=.=..+|++++|+...+..- .|+ ..++|+++-||-| +++.|+.. T Consensus 215 a--d~~~fpy~r~~g~~iq~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V~-------~~~g~qa~rIST~aIE~~i~~y~~ 285 (472) T protein:vir:21 215 T--TAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVY-------IIGSGQASPIATASIEKIIRSYTA 285 (472) T ss_pred C--CcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccEEE-------EccCceeEEecCHHHHHHHHhcCC Confidence 2 22233333332 357877766789999999999887421 122 2346667777433 44444432 Q ss_pred --eEE--EEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecCCc---eEEEEEEEcCCEEEEEEEeCCCEE Q lcl|Aclame:pro 507 --VFS--ISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDN---VTVFAAQVINSTMTVLMSNEHAVW 579 (801) Q Consensus 507 --v~~--~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~g~---~~~~~~~~~~d~ly~vv~r~~~~~ 579 (801) ..+ +.+.+.+...++...--+. -+||.- -.+.+.++ ||.-+.++. .+..|+.+-... +++-.. .++. T Consensus 286 ~e~~~A~~~t~~~eGH~fy~LtfP~~-Tw~yD~-at~~~~e~--W~~~~sg~~~~~~R~~~~~~~~g~-~ivGD~-~nG~ 359 (472) T protein:vir:21 286 EEMATGVMETLRFDSHELLIIHLPRH-VLVYDA-SSSQNGPQ--WCVLKTGLYDDVYRGVDFMYEGNQ-ITCGDK-SEAV 359 (472) T ss_pred ccccceEEEEEEeCCeEEEEEEcCCe-eEEEEc-ccCccCce--eeeeccCCCcCceeEEEEEeeCCe-EEEEEc-CCCe Confidence 112 2233333443332223333 334432 11122222 777666432 333332211111 111111 1222 Q ss_pred EEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCce-EEEEecCCceeeccccccccc Q lcl|Aclame:pro 580 MGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGR-VSVVFPDGKIVEIDQPINGWS 658 (801) Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g~-~v~v~~dG~~~~~~~~~~~~~ 658 (801) |-+|.+......... .+++...........-... ..+....|...-+-+ ...+-.||..... T Consensus 360 ly~L~fd~~~~~d~~---~~~~r~~p~~~~dn~R~fd------~eve~~~Gv~q~~d~v~L~wSddG~~~~~-------- 422 (472) T protein:vir:21 360 VGQLQFDISSQYDKQ---QEHLLFTPLFKADNARCFD------LEVESSTGVAQYADRLFLSATTDGINYGR-------- 422 (472) T ss_pred EEEEEecccccCCCc---CcEEEEccceeCCCCEEEE------EeeeccCCCCCcCcEEEEEeecccccccc-------- Confidence 222221111100000 0111110000000000000 000000111111111 1122222321110 Q ss_pred cCcEEEEcCCccCceEEEEEe--eeEEEEeCCeeEeccCCCCccceEEeeeEEEEEEEEEeecc-----eeEEEEeC Q lcl|Aclame:pro 659 SDPMLRLDGNQEGQVVYIGFN--IPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDS-----GAFIIRVN 728 (801) Q Consensus 659 ~~~~~~l~~~~~~~~v~vGl~--y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~~v~~~~t-----g~~~~~v~ 728 (801) ... +-.|-+ |..++..-. .-+.|.+| -.+|++... ++++++++ T Consensus 423 ---~~~---------~~~g~~g~~~tr~~~~R--------------lG~~r~~v-~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:21 423 ---EQM---------IEQNEPFVYDKRVLWKR--------------VGRIRRLI-GFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred ---cee---------eccCCccchhcceeeee--------------eeecccce-eEEEEEEecCcceeeeeEEeeC Confidence 000 011111 111111110 00011111 011111111 33344433 No 38 >protein:vir:177 Length: 472 # NCBI annotation: DNA stabilization protein # Family: family:all:1540 # MgeID: mge:5 # MgeName: HK620 # Cross-refs: genbank:acc:NP_112082;genbank:gi:13559872;genbank:GeneID:920982 Probab=43.56 E-value=0.84 Score=21.00 Aligned_cols=425 Identities=11% Similarity=0.030 Sum_probs=149.2 Q ss_pred HHhhhhcccceeeeeccccEEEEecCceEEEEe-CCCcceeEEEEecCCCcceeeeeeeeccccccccccc-------cC Q lcl|Aclame:pro 199 AAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILA-PNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINA-------PD 270 (801) Q Consensus 199 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~-------~~ 270 (801) ......-...-......+.......+-+.|... ..+.+...+.+..|- ..+.+++..+ ++ T Consensus 1 m~~~~~Pl~~G~~~~~~~~d~~~~~pVN~~a~~~~~~~s~~~l~~tPGl------------~~~a~v~G~~RG~~~~~~~ 68 (472) T protein:vir:17 1 MPIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGI------------AKRSDVNGVSRGVEYNMAQ 68 (472) T ss_pred CCeeeeeeccCceeeccccchhheeeeeeeeeccCCCcccceeecCCCc------------eeeccCCccccceEEEeeC Confidence 000000000000000001111111111111110 011111222222111 1122333333 12 Q ss_pred CeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEEEEeccCCeEEEeecccCcccCCCccccCCchh Q lcl|Aclame:pro 271 GYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSF 350 (801) Q Consensus 271 g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~~np~psf 350 (801) |....|.+. .=|.+. ..|-+.++.|...-.++.+-...++....--|++....-..-+-.++.. +|-. T Consensus 69 g~lY~V~G~-----~LY~v~-----~~iGsiag~grVsMa~n~~~~av~~~g~~~~Y~y~~~v~t~~~~~~d~~--~~~~ 136 (472) T protein:vir:17 69 NAVYRVCGG-----KLYKGE-----SEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPTDSG--FTQY 136 (472) T ss_pred CeEEEEecc-----eEeeee-----cceecccCcccEEEecCCcEEEEEECCceeEEEeeccchhhhccccccc--cccc Confidence 222233221 112221 1244445555444344433221111110000211110000000011111 1211 Q ss_pred cCCCceEEEEEcCceEEecCC--EEEEEecCCccccccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcE Q lcl|Aclame:pro 351 TGQTINDIFFFRNRLGFLSGE--NIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQAQ 428 (801) Q Consensus 351 ~g~~p~~v~f~q~RL~~~~~~--~v~~S~~gd~~nF~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q 428 (801) -.+....|+|+.+|++|.-|. .++.|..-|-+.. ++.-.++.+..+++.|.-++...+.|++|.+..- T Consensus 137 dlg~~~dv~f~dGyfV~~~~Gt~~~~is~l~d~~~~----------~~y~~fa~AE~~pD~Ivgi~~~~~~i~lfG~~Ti 206 (472) T protein:vir:17 137 ELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHP----------DRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTI 206 (472) T ss_pred cccceeeeeeecceEEEeccCcceEEEeccCCcccc----------ccccccccccCCCCceEEEEeeccEEEEEeccce Confidence 234577899999999988643 3445554442211 2222234477778888889999999999998875 Q ss_pred --EEEeCCcccc--cc--ceEEEEEeeecccCCCCcEEeCCeEEEEecCCCeE-EEEEEeeeeecccceehhhHHHH-HH Q lcl|Aclame:pro 429 --FVLTASDILS--SR--SVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFT-SINRYYAVQDVSSVKNAEDMTAH-VP 500 (801) Q Consensus 429 --~~~~~~~~lT--P~--~~~i~~~s~~~~~~~v~Pv~vg~~v~fv~~~g~~~-~v~~~~~~~~~~~~~~~~dls~~-~~ 500 (801) |..+|....+ |- +.....+ .+|++.=.=..+|++++|+......- .|+. .++|+++-||-| ++ T Consensus 207 Evw~ntG~a~~~~fpy~r~~g~~iq--~Gcaa~~sv~~~~~t~~~l~~d~~g~~~V~~-------~~g~~~~rIST~aIE 277 (472) T protein:vir:17 207 EYFSLTGATTVGAALYVAQPSLMVQ--KGIAGTYCKTPFADSYAFISNPATGAPSVYI-------IGSGQVSPISSASIE 277 (472) T ss_pred EEEEeeCCCCCCcCceeecCcceee--ecccCcchhhecCceEEEEecCCccccEEEE-------ccCceeEEecCHHHH Confidence 7777764322 11 1111223 47877666689999999998863211 2332 245666767433 44 Q ss_pred HhcCCC----eEE--EEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecC-CceEEE----------EEEE Q lcl|Aclame:pro 501 NYIPNG----VFS--ISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFG-DNVTVF----------AAQV 563 (801) Q Consensus 501 ~~~~g~----v~~--~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~-g~~~~~----------~~~~ 563 (801) +.|..- +.+ +.+.+.+...++...--+ .-+||.--. +..+.+++|-+-.+. ...+.. |... T Consensus 278 ~~i~~y~~~e~~dA~~~t~~~~GH~fy~LtfP~-~Tw~yD~~t-~~Wherw~~~~~g~~~~~~Ra~~~~~~~g~~~vGD~ 355 (472) T protein:vir:17 278 KILRSYTADELADGVMESLRFDAHELLIIHLPR-HVLVYDASS-SANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDK 355 (472) T ss_pred HHHHhcCCccccceeEEEEEeCCeEEEEEEcCC-ceeEeeccc-ccCceeeeeecCCCccCceEEEEEEEeCCeEEEEEc Confidence 444432 222 233333344333222222 333443211 122222222111111 011222 2233 Q ss_pred cCCEEEEEE---EeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcc-cCceEE Q lcl|Aclame:pro 564 INSTMTVLM---SNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNF-TKGRVS 639 (801) Q Consensus 564 ~~d~ly~vv---~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~-l~g~~v 639 (801) .+..||.+- ...++-.++++...+--.+... +++ |..+.... |..+ ..=+.. T Consensus 356 ~ng~ly~ld~~~~td~g~pi~~~~~~p~~~~~~~---RV~-d~el~~~t--------------------G~~~~adp~~l 411 (472) T protein:vir:17 356 LESVTGKLQFDISSQYDKQQEHLLFTPLFKADNA---RVF-DLEVESST--------------------GVAQYADRLFL 411 (472) T ss_pred CCCeEEEEcccCcCCCCceeEEEEecceeeCCCc---eEE-EEEEeeeC--------------------CcccCCCceEE Confidence 355666653 2233334444443322111111 222 32222111 1111 111222 Q ss_pred EEecCCceeeccccccccccCcEEEEcCCccCceEEEEEeeeEEEEeCCeeEeccCCCCccce--------EEeeeEEEE Q lcl|Aclame:pro 640 VVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTAT--------EDIGRLQLR 711 (801) Q Consensus 640 ~v~~dG~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~--------~~~~rl~l~ 711 (801) ..++||.....+.-... .-| -.|..++..-.. |+-+. +...++.|. T Consensus 412 ~~~sDg~~~g~~~~~~~-------~~~-----------g~~~~R~~~~Rl--------G~~r~~v~f~~~~~~~~~~~l~ 465 (472) T protein:vir:17 412 SATTDGINYGREQMIEQ-------NEP-----------FVYDKRVLWKRV--------GRIRKNVGFKLRVITKSPVTLS 465 (472) T ss_pred EcccCCcccchhhhhhh-------ccC-----------cccccceeeeee--------eeccccceEEEEEeecccceee Confidence 33445432211100000 000 111112111100 00000 000111122 Q ss_pred EEEEEeecceeEEEEeC Q lcl|Aclame:pro 712 RAWVNYEDSGAFIIRVN 728 (801) Q Consensus 712 ~~~v~~~~tg~~~~~v~ 728 (801) .+.++ ++ T Consensus 466 ~a~~~----------~e 472 (472) T protein:vir:17 466 GCQIR----------IE 472 (472) T ss_pred eeEEE----------eC Confidence 22222 22 No 39 >protein:vir:105428 Length: 472 # NCBI annotation: gene 8 protein # Family: family:all:1540 # MgeID: mge:1556 # MgeName: Sf6 # Cross-refs: genbank:acc:NP_958184;genbank:gi:41057286;genbank:GeneID:2716675 Probab=28.44 E-value=1.7 Score=19.25 Aligned_cols=427 Identities=11% Similarity=0.030 Sum_probs=152.7 Q ss_pred HHhhhhcccceeeeeccccEEEEecCceEEEEeC-CCcceeEEEEecCCCcceeeeeeeeccccccccccc-------cC Q lcl|Aclame:pro 199 AAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAP-NNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINA-------PD 270 (801) Q Consensus 199 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~tit~~dg~~~t~~~~~~~~v~~~~~lp~~~-------~~ 270 (801) ......-...-......+.......+-+.|.... .+.+...+.+..|- ..+.+++..+ ++ T Consensus 1 m~~~~~pl~~G~~~~~~~~d~~~~~pVN~~a~~~~~~~s~~~l~~tPGl------------~~~a~v~G~~RG~~~~~~~ 68 (472) T protein:vir:10 1 MPIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGI------------AKRSDVNGVSRGVEYNMAQ 68 (472) T ss_pred CCeeeeeeccCceeeccccchhheeeeeeeeeccCCCcccceeecCCCc------------eeeccCCccccceEEEeeC Confidence 0000000000000000011111111111111100 11111222222111 1122333333 12 Q ss_pred CeEEEEeecCCCCcceEEEEEEcCCeEEEEEeccceeeeEeeccccEEEEeccCCe--EEEeecccCcccCCCccccCCc Q lcl|Aclame:pro 271 GYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALVRASDGN--FDFKYLEWGARTVGDDTTNPYP 348 (801) Q Consensus 271 g~~v~i~~~~~~~~~~y~v~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t--~~~~~~~w~~r~~gd~~~np~p 348 (801) |....|.+. .=|.+. ..|-+.++.|...--+..+-.. +...+.. |++....-..-+-.++.. +| T Consensus 69 g~lY~V~G~-----~LY~v~-----~~iGsiag~grVsMa~n~~~~a--v~~~g~~~~Y~yd~~v~t~~~~~~d~~--~p 134 (472) T protein:vir:10 69 NAVYRVCGG-----KLYKGE-----SEVGDVAGSGRVSMAHGRTSQA--VGVNGQLVEYRYDGTVKTVSNWPTDSG--FT 134 (472) T ss_pred CeEEEEecc-----eEeeee-----cceecccCcccEEEecCCcEEE--EEECCceeEEEeeccchhhhccccccc--cc Confidence 222223221 112221 1244444444333223322211 1111111 211110000000011111 12 Q ss_pred hhcCCCceEEEEEcCceEEecCC--EEEEEecCCccccccccccccCCCccEEEEEcCCcceeeeeeeecCCcEEEEecC Q lcl|Aclame:pro 349 SFTGQTINDIFFFRNRLGFLSGE--NIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHDRVSTLKYAVPFSEELLLWSDQ 426 (801) Q Consensus 349 sf~g~~p~~v~f~q~RL~~~~~~--~v~~S~~gd~~nF~~~s~~~~~D~D~i~~~~~~~~~~~i~~~v~~~~~L~l~t~~ 426 (801) -.-.+....|+|+.+|++|.-|. .++.|..-|-+.. ++.-.++.+..+++.|.-++...+.|++|.+. T Consensus 135 ~~dlg~~~dv~f~dGyfV~~~~Gt~~~~is~l~d~~~~----------~~y~~fa~AE~~pD~Ivgi~~~~~~i~lfG~~ 204 (472) T protein:vir:10 135 QYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHP----------DRYSAQYRAESQPDGIIGIGTWRDFIVCFGSS 204 (472) T ss_pred cccccceeeeeeecceEEEeccCcceEEEeccCCcccc----------ccccccccccCCCCceEEEEeeccEEEEEecc Confidence 11234577899999999988643 3445554442211 22222344777788888899999999999988 Q ss_pred cE--EEEeCCccccccceEEEEEe----eecccCCCCcEEeCCeEEEEecCCCeE-EEEEEeeeeecccceehhhHHH-H Q lcl|Aclame:pro 427 AQ--FVLTASDILSSRSVGLNLTT----QFDVQDRARPHGVGRNVYFSSPRASFT-SINRYYAVQDVSSVKNAEDMTA-H 498 (801) Q Consensus 427 ~q--~~~~~~~~lTP~~~~i~~~s----~~~~~~~v~Pv~vg~~v~fv~~~g~~~-~v~~~~~~~~~~~~~~~~dls~-~ 498 (801) .- |..+|+. +|+-+-..+++ ..+|++.=.=..+|++++|+......- .|+. .++|+++-||- - T Consensus 205 TiEvw~ntG~a--~~~~fpy~r~~g~~iq~Gcaa~~sv~~~~~t~~~l~~d~~g~~~V~~-------~~g~~~~rIST~a 275 (472) T protein:vir:10 205 TIEYFSLTGAT--TAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISNPATGAPSVYI-------IGSGQVSPIASAS 275 (472) T ss_pred ceEEEEecCCC--CcccCceeecccceeeecccCcchhhecCceEEEEecCCccccEEEE-------ccCceeEEecCHH Confidence 75 7777753 22222222222 347777666689999999998863211 2332 24566666643 3 Q ss_pred HHHhcCCC----eEE--EEEcCCCCeEEEEEEcCCCEEEEEEeeeCCCceEEEEEEeeecC-CceEEE----------EE Q lcl|Aclame:pro 499 VPNYIPNG----VFS--ISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFG-DNVTVF----------AA 561 (801) Q Consensus 499 ~~~~~~g~----v~~--~~~~~~~~~~~~~~~~~~~~l~~~ty~~~~~e~~~~aW~~w~~~-g~~~~~----------~~ 561 (801) +++.|..- +.+ +.+.+.+...++...--+ .-+||.--. +..+.+++|-+-.+. ...+.. |. T Consensus 276 IE~~i~~y~~~e~~dA~~~t~~~~GH~fy~LtfP~-~Tw~yD~~t-~~Wherw~~~~~g~~~~~~Ra~~~~~~~g~~~vG 353 (472) T protein:vir:10 276 IEKILRSYTADELADGVMESLRFDAHELLIIHLPR-HVLVYDASS-SANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCG 353 (472) T ss_pred HHHHHHhcCCccccceeEEEEEeCCeEEEEEEcCC-ceeEeeccc-ccCceeeeeecCCCccCceEEEEEEEeCCeEEEE Confidence 44444432 222 233333344332222222 333443211 122222222111111 011222 22 Q ss_pred EEcCCEEEEEE---EeCCCEEEEEEEEeeccCCCCcccceeeeeeeEEEecccccccccccceeeccccccCCcccCc-e Q lcl|Aclame:pro 562 QVINSTMTVLM---SNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKG-R 637 (801) Q Consensus 562 ~~~~d~ly~vv---~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~l~g-~ 637 (801) +..+..||.+- .+..+-.++++...+--.+ .. -+ .+|..++... |..+-+. + T Consensus 354 D~~ng~ly~l~~~~~td~G~~i~~~~~~p~~~~-d~--~R-v~d~~ve~~~--------------------G~~~~adp~ 409 (472) T protein:vir:10 354 DKLESVTGKLQFDISSQYGLQQEHLLFTPLFKA-DN--AR-CFDLEVESST--------------------GVAQYADRL 409 (472) T ss_pred EcCCCeEEEEcccCcCcCCCcceEEEeccceeC-CC--Ce-EEEEEEEeec--------------------CCCcccCce Confidence 33356666653 2333444444433221111 11 12 2343322211 1111111 2 Q ss_pred EEEEecCCceeeccccccccccC---cEEEEcCCccC-ceEEEEEeeeEEEEeCCeeEeccCCCCccceEEeeeEEEEEE Q lcl|Aclame:pro 638 VSVVFPDGKIVEIDQPINGWSSD---PMLRLDGNQEG-QVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRA 713 (801) Q Consensus 638 ~v~v~~dG~~~~~~~~~~~~~~~---~~~~l~~~~~~-~~v~vGl~y~s~v~~~~~~~~~~~~~~~~~~~~~~rl~l~~~ 713 (801) ....++||.....+.-......+ .++..- +-+ ..=-||+ +-++..+-|. .|..+ T Consensus 410 ~~~~~sDg~~~g~~~~~~~~~~g~~~~R~~~~--RlG~~r~~vgf--~~r~~~~~~v------------------~l~ga 467 (472) T protein:vir:10 410 FLSATTDGINYGREQMIEQNEPFVYDKRVLWK--RVGRIRKNVGF--KLRVITKSPV------------------TLSGA 467 (472) T ss_pred EEEeccCCcccchhhhhhhccCcccccceeee--eeeeccccceE--EEEEEecccc------------------ceeee Confidence 23344554332211000000000 111110 000 0001233 2233332221 23333 Q ss_pred EEEee Q lcl|Aclame:pro 714 WVNYE 718 (801) Q Consensus 714 ~v~~~ 718 (801) ++++. T Consensus 468 ~~~~e 472 (472) T protein:vir:10 468 QIRIE 472 (472) T ss_pred eEEeC Confidence 44444 Done!