Query lcl|Aclame:protein:vir:4095|NCBI_annot:Gp8 protein|genbank:acc:NP_510989;swissprot:trembl:q8w601;genbank:gi:17488511;uniprot:Q8W601;genbank:GeneID:1260317 Match_columns 136 No_of_seqs 10 out of 13 Neff 2.9 Searched_HMMs 1612 Date Sat Nov 30 07:45:21 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_8 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_8_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:4095 Length: 136 # 100.0 2.9E-73 1.8E-76 418.3 12.3 136 1-136 1-136 (136) 2 protein:vir:79047 Length: 145 7.6 8.8 0.0054 15.4 10.4 116 8-136 1-128 (145) 3 protein:vir:4860 Length: 123 # 4.9 14 0.0086 14.3 8.7 116 1-134 1-123 (123) 4 protein:vir:9764 Length: 111 # 4.5 14 0.0089 14.2 2.8 59 1-75 53-111 (111) 5 protein:vir:9709 Length: 141 # 4.2 16 0.0099 14.0 4.5 119 1-136 13-137 (141) 6 protein:vir:100200 Length: 123 3.8 18 0.011 13.7 8.5 116 1-134 1-123 (123) 7 protein:vir:4834 Length: 123 # 3.6 19 0.012 13.6 8.2 116 1-134 1-123 (123) 8 protein:vir:94768 Length: 111 3.0 22 0.014 13.2 2.8 59 1-75 53-111 (111) 9 protein:vir:1643 Length: 111 # 3.0 23 0.014 13.1 2.6 59 1-75 53-111 (111) 10 protein:vir:100888 Length: 123 2.6 26 0.016 12.8 8.4 117 1-134 1-123 (123) No 1 >protein:vir:4095 Length: 136 # NCBI annotation: Gp8 protein # Family: family:all:28681 # MgeID: mge:86 # MgeName: 2389 # Cross-refs: genbank:acc:NP_510989;swissprot:trembl:q8w601;genbank:gi:17488511;uniprot:Q8W601;genbank:GeneID:1260317 Probab=100.00 E-value=2.9e-73 Score=418.28 Aligned_cols=136 Identities=100% Similarity=1.385 Sum_probs=135.6 Q ss_pred CchhHHHHHHHHHHHHHhhhhhhhceeEEeeccccccchhhhcCcccEEEEecCceeccCCCceeEEEEEEEEEEecCcc Q lcl|Aclame:pro 1 MNEATKERITKLNEYLITKLSENTGLNVYQDNVSETELNEEMNGVYDYIIFSTGGFSKSDTSQFTLIQEVTVQVATENTS 80 (136) Q Consensus 1 mNe~~Kerl~k~n~~l~~~LE~~f~l~V~qD~v~EdE~~~~~~~~yNyfi~EtGgF~~~~~~~~tl~Q~V~v~fySEnre 80 (136) |||++||||+|||++||++||+||||+||||+|||||++++++++|||||||||||++++.+++||+|+|||+||||||+ T Consensus 1 mNek~Kerl~k~~~~i~~~L~e~f~l~v~qD~vsEdE~~~~~n~~Y~yfi~etG~f~~s~~~~~Tl~Q~v~v~~~sEN~~ 80 (136) T protein:vir:40 1 MNEATKERITKLNEYLITKLSENTGLNVYQDNVSETELNEEMNGVYDYIIFSTGGFSKSDTSQFTLIQEVTVQVATENTS 80 (136) T ss_pred CChHHHHHHHHHHHHHHhhhhhhhcceEEecccccccchhhhcccceEEEEecCccccccCccceeeeEEEEEEeecCcc Confidence 99999999999999999999999999999999999999999999999999999999999899999999999999999999 Q ss_pred ccchhhhhhhhhccccccccceeeeecCccceeeccccceeeeEEEEEeeeeccCC Q lcl|Aclame:pro 81 DLDGLQIDIITSLEGTGGAGPYYFLNSTKGQVQKGQQDGYVDALELIFTRSFKYVC 136 (136) Q Consensus 81 DLd~~~lDiis~L~~t~~~~~~~f~~s~k~~lq~~~~D~yVD~v~F~f~R~ik~~C 136 (136) ||||++|||||+|++|||+.||+||+|+|+|+||++||+|||+|+|+|||++||+| T Consensus 81 DLd~~~iDIIs~le~~~~~~~~~F~~s~~~~lq~~~~D~YID~l~~~f~R~~k~~C 136 (136) T protein:vir:40 81 DLDGLQIDIITSLEGTGGAGPYYFLNSTKGQVQKGQQDGYVDALELIFTRSFKYVC 136 (136) T ss_pred ccchhhhhhhhhhhccCCcceeeEEecCCcceecccccchheeeeeeeeeeeeccC Confidence 99999999999999999999999999999999999999999999999999999999 No 2 >protein:vir:79047 Length: 145 # NCBI annotation: hypothetical protein # Family: family:all:1535 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110730;genbank:gi:134287347;genbank:GeneID:4955221 Probab=7.57 E-value=8.8 Score=15.41 Aligned_cols=116 Identities=13% Similarity=0.092 Sum_probs=66.5 Q ss_pred HHHHHHHHHHhhhhhhhc--eeEEeeccccccchhhhcCcccEEEEecC--ceeccCCCceeEEEEEEEEEEecCccccc Q lcl|Aclame:pro 8 RITKLNEYLITKLSENTG--LNVYQDNVSETELNEEMNGVYDYIIFSTG--GFSKSDTSQFTLIQEVTVQVATENTSDLD 83 (136) Q Consensus 8 rl~k~n~~l~~~LE~~f~--l~V~qD~v~EdE~~~~~~~~yNyfi~EtG--gF~~~~~~~~tl~Q~V~v~fySEnreDLd 83 (136) -|.....+|.+.|-+.|+ .+||=+++...= +. =||.+..= .-.+.-..+|.-...+.|.||++.+.. . T Consensus 1 mi~dI~~aI~~~Lk~~Fp~~~~IY~e~i~Qgf-~~------PcFFI~ll~~~~~~~~~~r~~r~~~~dI~Yfp~~~~~-~ 72 (145) T protein:vir:79 1 MLNNIIDGISVKLDKSFGEKYTIYSEDVEQGI-NE------PCFFIVPLNPSKTPYPSGRELKKNSFDVHYFPRSEAK-N 72 (145) T ss_pred ChHHHHHHHHHHHHHhcCCceEEEecccccCc-cC------CeeEEEEeccccccccCceEEEEEEEEEEEeecCCCC-c Confidence 677888899999999996 689988885442 11 35555433 223444678888899999999986654 4 Q ss_pred hhhhhhhhhccccccccceeeeecCccceeeccc-cceee-eEEEEEeee------eccCC Q lcl|Aclame:pro 84 GLQIDIITSLEGTGGAGPYYFLNSTKGQVQKGQQ-DGYVD-ALELIFTRS------FKYVC 136 (136) Q Consensus 84 ~~~lDiis~L~~t~~~~~~~f~~s~k~~lq~~~~-D~yVD-~v~F~f~R~------ik~~C 136 (136) ....|+...|...= .|..+.+. .++-.+. -..|| +|.|+|.=. ....+ T Consensus 73 ~e~~ev~e~L~~~l---e~i~v~~~--~~~~~~~~~eivDgvLhf~~~~~~~~~k~~~~~~ 128 (145) T protein:vir:79 73 FEINEIAEMLLEEL---EYIEINGD--LVRGTNMNFEIIDNVLHFFVDYNYFTIKSNNADK 128 (145) T ss_pred hhHHHHHHHHHhhh---cceeecCc--EEeeecceeEEeeceEEEEEEEEEEEeeecCccc Confidence 55667776665311 12222221 2222211 12344 455555422 22233 No 3 >protein:vir:4860 Length: 123 # NCBI annotation: putative tail component protein # Family: family:all:1192 # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049400;genbank:gi:9632428;genbank:GeneID:1258518 Probab=4.86 E-value=14 Score=14.31 Aligned_cols=116 Identities=14% Similarity=0.133 Sum_probs=63.1 Q ss_pred Cc--hhHHHHHHHHHHHHHhhhhhhhceeEEeeccccccchhhhcCcccEEEE-ecC-ceeccCCCc-eeEEEEEEEE-E Q lcl|Aclame:pro 1 MN--EATKERITKLNEYLITKLSENTGLNVYQDNVSETELNEEMNGVYDYIIF-STG-GFSKSDTSQ-FTLIQEVTVQ-V 74 (136) Q Consensus 1 mN--e~~Kerl~k~n~~l~~~LE~~f~l~V~qD~v~EdE~~~~~~~~yNyfi~-EtG-gF~~~~~~~-~tl~Q~V~v~-f 74 (136) |= .+.|++|...+-.-+ =+||-.++..+.... +...-+.+ |.. ++--.++.. ..+.|.|.|+ | T Consensus 1 m~pv~~v~~li~~~~~~~i--------D~vy~~~Ip~e~~~~---~d~T~vLiTe~~~~~~~ygnn~f~~~~~~vEVQIF 69 (123) T protein:vir:48 1 MLATVKLKELIEGKGFGEI--------SEVYANNLPKELEDN---TDKTIVLLTESNPSLDLSGNNTFFSKTDRVEVQIF 69 (123) T ss_pred CccHHHHHHHHHhcCCCcc--------eeeeecCCCcceecC---CceEEEEEecccCCcccccCceeeeEEEEEEEEEE Confidence 32 233444433322111 259999998877554 22333333 322 121122233 2567999987 8 Q ss_pred EecCcc-ccchhhhhhhhhccccccccceeeeecCccceeeccccceeeeEEEEEeeeecc Q lcl|Aclame:pro 75 ATENTS-DLDGLQIDIITSLEGTGGAGPYYFLNSTKGQVQKGQQDGYVDALELIFTRSFKY 134 (136) Q Consensus 75 ySEnre-DLd~~~lDiis~L~~t~~~~~~~f~~s~k~~lq~~~~D~yVD~v~F~f~R~ik~ 134 (136) |+.|-+ |++...+-+|+.|..-|-. =..| +.|.-=.+|.-=. ..|.|+|.--. T Consensus 70 yk~~~~~di~~~E~~L~~~l~~~~W~----i~~s-~~h~~DPdT~Q~t--~tfy~~k~~~i 123 (123) T protein:vir:48 70 YKLDIDFDIEAFEMELIKFLKSEHYS----ITDI-REHSIDPDTLQLT--AVFFVAFDRFI 123 (123) T ss_pred eecCCCcCHHHHHHHHHHHHhhCCce----EEec-CCCcCCCCCCeEE--EEEEEEeeecC Confidence 999985 9999999999999976522 1222 3444444444333 34455555444 No 4 >protein:vir:9764 Length: 111 # NCBI annotation: hypothetical protein # Family: family:all:1269 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795526;genbank:gi:28876278;genbank:GeneID:1257819 Probab=4.47 E-value=14 Score=14.24 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=27.6 Q ss_pred CchhHHHHHHHHHHHHHhhhhhhhceeEEeeccccccchhhhcCcccEEEEecCceeccCCCceeEEEEEEEEEE Q lcl|Aclame:pro 1 MNEATKERITKLNEYLITKLSENTGLNVYQDNVSETELNEEMNGVYDYIIFSTGGFSKSDTSQFTLIQEVTVQVA 75 (136) Q Consensus 1 mNe~~Kerl~k~n~~l~~~LE~~f~l~V~qD~v~EdE~~~~~~~~yNyfi~EtGgF~~~~~~~~tl~Q~V~v~fy 75 (136) +=..++..-.++|..+++-++.+-+++ +|+-- +.++.|||-=-|| .+|-+-=++-+.|| T Consensus 53 syg~S~~~AA~La~~V~~a~~~l~~l~----~i~~v----~lns~Ynf~d~~t--------k~yRYQa~~di~~~ 111 (111) T protein:vir:97 53 SYAESLYEAALLNDKVKQVIEQLDVLP----QVSGV----HLNADYNFTDTAT--------KRYRYQAVFDINHY 111 (111) T ss_pred ecchhHHHHHHHHHHHHHHhhhhccCc----cceee----eecccccCCCCCC--------CCccEEEEEEEeeC Confidence 222233333344444444444333221 22222 4567799644444 34444467778888 No 5 >protein:vir:9709 Length: 141 # NCBI annotation: hypothetical protein # Family: family:all:2110 # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795471;genbank:gi:28876220;genbank:GeneID:1257764 Probab=4.24 E-value=16 Score=13.98 Aligned_cols=119 Identities=16% Similarity=0.174 Sum_probs=66.1 Q ss_pred CchhHHHHHHHHHHHHHhhhhhhhceeEEeeccccccchhhhcCccc-EEEEecCce--eccCCCceeEEEEEEEEEEec Q lcl|Aclame:pro 1 MNEATKERITKLNEYLITKLSENTGLNVYQDNVSETELNEEMNGVYD-YIIFSTGGF--SKSDTSQFTLIQEVTVQVATE 77 (136) Q Consensus 1 mNe~~Kerl~k~n~~l~~~LE~~f~l~V~qD~v~EdE~~~~~~~~yN-yfi~EtGgF--~~~~~~~~tl~Q~V~v~fySE 77 (136) -|++-+++|++++.. +++...--.+|-.+|.|+-..-..-..-= --|-|+.|. --+++..++....|.|.+++. T Consensus 13 ~n~~L~~lm~~~r~~---~~~~~~~~~If~~~vPE~~~~~qk~~~aP~IrI~~i~~~~~~yADn~~~~~~~~vQIdiW~~ 89 (141) T protein:vir:97 13 NDKTLNELLDKLRGG---PFKNGFKQGIFTYDIPDNPIDLRKAELAPFMRIKTTLDGPADYADDEILCNEQRITINFWCK 89 (141) T ss_pred ccHHHHHHHhhhccc---cccccccccccccccCCChhhhhhhccCCeEEEeccCCCcccccccccceeeeeeEeeeeec Confidence 566666676666643 44444445567777877631100000011 234566555 334578889999999999999 Q ss_pred CccccchhhhhhhhhccccccccceeeeecCc---cceeeccccceeeeEEEEEeeeeccCC Q lcl|Aclame:pro 78 NTSDLDGLQIDIITSLEGTGGAGPYYFLNSTK---GQVQKGQQDGYVDALELIFTRSFKYVC 136 (136) Q Consensus 78 nreDLd~~~lDiis~L~~t~~~~~~~f~~s~k---~~lq~~~~D~yVD~v~F~f~R~ik~~C 136 (136) .+.+++...=.|=..|..-| |+.=+. ....-.|+|.|... -+|.| T Consensus 90 ~~~~~e~i~~~Id~~M~~~g------f~rY~~~~~~~~~dpD~d~~~~~--------rRYr~ 137 (141) T protein:vir:97 90 TASEADQINKCIDNILKQGG------FERYTANEKPRYKDSDIDLLMNV--------RKYRC 137 (141) T ss_pred ChhHHHHHHHHHHHHHHhcC------ceeccccCCCCCCccchhhhhhh--------hheee Confidence 88888876655555555444 332222 22334445554443 23444 No 6 >protein:vir:100200 Length: 123 # NCBI annotation: putative tail component # Family: family:all:1192 # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025035;genbank:gi:48697268;genbank:GeneID:2948298 Probab=3.81 E-value=18 Score=13.72 Aligned_cols=116 Identities=14% Similarity=0.194 Sum_probs=64.3 Q ss_pred Cc--hhHHHHHHHHHHHHHhhhhhhhceeEEeeccccccchhhhcCccc-EEEEecC-ceeccC-CCceeEEEEEEEE-E Q lcl|Aclame:pro 1 MN--EATKERITKLNEYLITKLSENTGLNVYQDNVSETELNEEMNGVYD-YIIFSTG-GFSKSD-TSQFTLIQEVTVQ-V 74 (136) Q Consensus 1 mN--e~~Kerl~k~n~~l~~~LE~~f~l~V~qD~v~EdE~~~~~~~~yN-yfi~EtG-gF~~~~-~~~~tl~Q~V~v~-f 74 (136) |= -+.+++|...+-.-++ .||-..+..+.... +... ..|=|.. ++---+ +.-..+.|.|.|+ | T Consensus 1 M~~v~~v~~ll~~~~~~~iD--------~vy~~~Ip~e~~~~---~~~T~vLiTe~~~~~~~ygnn~f~~~~~~VeIQIf 69 (123) T protein:vir:10 1 MSAVDDAVTVLNQAHIAGID--------AIYGNNLPKSELDN---VNKTVVLVTDSADDPPSFGNNDFWSLNQEVELQIW 69 (123) T ss_pred CCcHHHHHHHHHhcCCCccc--------eeeecCCCcccccC---CceeEEEEeccCCCcccccCCceeeeEEEEEEEEE Confidence 32 2344444333322222 58999998766544 2222 2233332 111111 2223578999998 5 Q ss_pred EecC-ccccchhhhhhhhhccccccccceeeeecCccceeeccccceeeeEEEEEeeeecc Q lcl|Aclame:pro 75 ATEN-TSDLDGLQIDIITSLEGTGGAGPYYFLNSTKGQVQKGQQDGYVDALELIFTRSFKY 134 (136) Q Consensus 75 ySEn-reDLd~~~lDiis~L~~t~~~~~~~f~~s~k~~lq~~~~D~yVD~v~F~f~R~ik~ 134 (136) |+-| -.|++...+-+++.|..-|-.+ .+...|.--.++.... ..|.|+|.-.. T Consensus 70 Y~~~~~~d~~~~E~~L~~~f~~~~W~i-----~~s~~h~~DPdT~Q~~--~t~~~~k~~~i 123 (123) T protein:vir:10 70 YAQLLDSDTEAIEIAMMKAFTHQHWQV-----AAVRQRTLDPDTQQLF--NTFYFSRTKNI 123 (123) T ss_pred eccCCCCCHHHHHHHHHHHHhcCCcEE-----EecCCCcCCCCCCeEE--EEEEEEeeecC Confidence 6666 4589999999999999766433 3335566556666544 34555665555 No 7 >protein:vir:4834 Length: 123 # NCBI annotation: ORF30 # Family: family:all:1192 # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038331;genbank:gi:9634657;genbank:GeneID:1262620 Probab=3.65 E-value=19 Score=13.62 Aligned_cols=116 Identities=13% Similarity=0.136 Sum_probs=64.4 Q ss_pred Cc--hhHHHHHHHHHHHHHhhhhhhhceeEEeeccccccchhhhcCcccEEEE-ecC-ceeccCCCce-eEEEEEEEE-E Q lcl|Aclame:pro 1 MN--EATKERITKLNEYLITKLSENTGLNVYQDNVSETELNEEMNGVYDYIIF-STG-GFSKSDTSQF-TLIQEVTVQ-V 74 (136) Q Consensus 1 mN--e~~Kerl~k~n~~l~~~LE~~f~l~V~qD~v~EdE~~~~~~~~yNyfi~-EtG-gF~~~~~~~~-tl~Q~V~v~-f 74 (136) |= .+.+++|...+-.-+ =+||-.++..+.... +...-+.+ |.. ++--.++..+ .+.|.|.|+ | T Consensus 1 m~pv~~v~~li~~~~~~~i--------D~vy~~~Ip~e~~~~---~d~T~vLiTe~~~~~~~ygnn~f~~~~~~vEVQIF 69 (123) T protein:vir:48 1 MLATVKLKELIEGKGFGEI--------SEVYANNLPKELEEN---TDKTIVLLTESNPSLDLSGNNTFFSKTDRVEVQIF 69 (123) T ss_pred CccHHHHHHHHHhcCCCcc--------eeeeccCCCcceecC---CceEEEEEecccCCcccccCceeeeEEEEEEEEEE Confidence 32 234444443332211 259999998877554 22333333 322 1211222332 567999987 8 Q ss_pred EecCcc-ccchhhhhhhhhccccccccceeeeecCccceeeccccceeeeEEEEEeeeecc Q lcl|Aclame:pro 75 ATENTS-DLDGLQIDIITSLEGTGGAGPYYFLNSTKGQVQKGQQDGYVDALELIFTRSFKY 134 (136) Q Consensus 75 ySEnre-DLd~~~lDiis~L~~t~~~~~~~f~~s~k~~lq~~~~D~yVD~v~F~f~R~ik~ 134 (136) |+.|-+ |++...+-+|+.|..-|-. =..| +.|.-=.+|.-=. ..|.|+|.-.. T Consensus 70 yk~~~~~di~~~Ei~L~~~~~~~~W~----i~~s-~~h~~DPdT~Q~t--~t~y~~k~~~i 123 (123) T protein:vir:48 70 YKADIDFDIEAFEMELLKFLKSEHYS----ITDM-REHSIDPDTLQIT--AVFFVAFDKLI 123 (123) T ss_pred eecCCCcCHHHHHHHHHHHHhhCCce----EEec-CCCcCCCCCCeEE--EEEEEEecccC Confidence 999985 9999999999999976522 1222 3444334443332 35666666666 No 8 >protein:vir:94768 Length: 111 # NCBI annotation: unknown # Family: family:all:1269 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996711;genbank:gi:45597426;genbank:GeneID:2769040 Probab=3.02 E-value=22 Score=13.17 Aligned_cols=59 Identities=17% Similarity=0.284 Sum_probs=28.9 Q ss_pred CchhHHHHHHHHHHHHHhhhhhhhceeEEeeccccccchhhhcCcccEEEEecCceeccCCCceeEEEEEEEEEE Q lcl|Aclame:pro 1 MNEATKERITKLNEYLITKLSENTGLNVYQDNVSETELNEEMNGVYDYIIFSTGGFSKSDTSQFTLIQEVTVQVA 75 (136) Q Consensus 1 mNe~~Kerl~k~n~~l~~~LE~~f~l~V~qD~v~EdE~~~~~~~~yNyfi~EtGgF~~~~~~~~tl~Q~V~v~fy 75 (136) +=..++..-.++|..+++-++.+-++ +.++-= +.++.||| +.++..+|-+-=.+-++|| T Consensus 53 ~~~~S~~eAa~La~~v~~~~~~l~~~----~~i~~v----~~~s~Ynf--------~d~~tk~~RYQav~~i~~~ 111 (111) T protein:vir:94 53 SYAPSMYEAAKLNEQLKEVVERLIEL----NEISNV----SLNSDYNF--------TDTETKEYRYQAVFDINHY 111 (111) T ss_pred ecchhHHHHHHHHHHHHHHHhhcccc----ccccee----ecCCCccc--------CCCcCCCceEEEEEEEeeC Confidence 22223333344455555555444322 233322 45677886 3333344555467778888 No 9 >protein:vir:1643 Length: 111 # NCBI annotation: hypothetical protein # Family: family:all:1269 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695064;genbank:gi:23455755;genbank:GeneID:955492 Probab=2.98 E-value=23 Score=13.14 Aligned_cols=59 Identities=17% Similarity=0.272 Sum_probs=28.1 Q ss_pred CchhHHHHHHHHHHHHHhhhhhhhceeEEeeccccccchhhhcCcccEEEEecCceeccCCCceeEEEEEEEEEE Q lcl|Aclame:pro 1 MNEATKERITKLNEYLITKLSENTGLNVYQDNVSETELNEEMNGVYDYIIFSTGGFSKSDTSQFTLIQEVTVQVA 75 (136) Q Consensus 1 mNe~~Kerl~k~n~~l~~~LE~~f~l~V~qD~v~EdE~~~~~~~~yNyfi~EtGgF~~~~~~~~tl~Q~V~v~fy 75 (136) +=..+...-.++|..++.-|+.+-++ +.|+-= +.++.|||- .+++.+|-+-=.+-++|| T Consensus 53 ~w~~S~~eAa~La~~v~~~l~~l~~~----~~I~av----~~~s~ynf~--------d~~tk~~RYQav~~i~~~ 111 (111) T protein:vir:16 53 SYAPSMYEAAKLNEQLKEVVERLIEL----NEISNV----SLNSDYNFT--------DTETKEYRYQAVFDINHY 111 (111) T ss_pred ecchhHHHHHHHHHHHHHHHhhcccc----ccceee----ecCCCCcCC--------CCCCCCceEEEEEEEeeC Confidence 22222333334455555555443222 233322 456789863 333344444467778888 No 10 >protein:vir:100888 Length: 123 # NCBI annotation: putative tail component # Family: family:all:1192 # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358768;genbank:gi:77999994;genbank:GeneID:3726159 Probab=2.55 E-value=26 Score=12.77 Aligned_cols=117 Identities=14% Similarity=0.150 Sum_probs=64.8 Q ss_pred Cc--hhHHHHHHHHHHHHHhhhhhhhceeEEeeccccccchhhhcCcccEEEEecC-ceeccCCCc-eeEEEEEEEE-EE Q lcl|Aclame:pro 1 MN--EATKERITKLNEYLITKLSENTGLNVYQDNVSETELNEEMNGVYDYIIFSTG-GFSKSDTSQ-FTLIQEVTVQ-VA 75 (136) Q Consensus 1 mN--e~~Kerl~k~n~~l~~~LE~~f~l~V~qD~v~EdE~~~~~~~~yNyfi~EtG-gF~~~~~~~-~tl~Q~V~v~-fy 75 (136) |= .+.+++|...+-.-+ =+||-.++..+.... ++.=-+.|=|.. ++--.++.. ..+.|.|.|+ || T Consensus 1 M~~v~~v~~ll~~~~~~~i--------D~vy~~~Ip~e~~~~--~d~T~vLiTe~~~~~~~ygn~~f~~~~~~VeIQIFy 70 (123) T protein:vir:10 1 MSAVSDAVTMLSQAGITSI--------DAVEGNNLPQELVDS--LEKTVVLITDAANDPTAHGDNDFWALNQEVEVQIWY 70 (123) T ss_pred CCcHHHHHHHHHhcCCCcc--------eeeeecCCCcccccC--CceeEEEEeccCCCcccccCCceeeeeeEEEEEEEe Confidence 32 233333332222211 258999997665443 112223343432 222222222 3577999998 56 Q ss_pred ecC-ccccchhhhhhhhhccccccccceeeeecCccceeeccccceeeeEEEEEeeeecc Q lcl|Aclame:pro 76 TEN-TSDLDGLQIDIITSLEGTGGAGPYYFLNSTKGQVQKGQQDGYVDALELIFTRSFKY 134 (136) Q Consensus 76 SEn-reDLd~~~lDiis~L~~t~~~~~~~f~~s~k~~lq~~~~D~yVD~v~F~f~R~ik~ 134 (136) +-| -.|++...+-+++.|..-|-.+ .+.+.|.--.+|....= .|.|+|.-.. T Consensus 71 ~~~~~~di~~~E~~l~~~l~~~~W~i-----~~s~~h~~DPdT~Q~~~--t~y~~k~e~i 123 (123) T protein:vir:10 71 SKLLDSDPEAIEIAMMKAFTHQHWQV-----AAVRQRTLDPDTQQLFN--TFYFSRTKNI 123 (123) T ss_pred ccCCCCCHHHHHHHHHHHHhcCCcEE-----EeCCCCcCCCCCCeEEE--EEEEEeeecC Confidence 666 4489999999999999777443 34466766666665543 4555555555 Done!