Query lcl|Aclame:protein:vir:3989|NCBI_annot:putative portal protein|genbank:acc:NP_116497;genbank:gi:14251130;genbank:GeneID:921299 Match_columns 392 No_of_seqs 147 out of 1122 Neff 10.0 Searched_HMMs 1612 Date Sat Nov 30 01:44:02 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_5 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_5_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:7407 Length: 392 # 100.0 2E-102 1E-105 578.2 42.7 392 1-392 1-392 (392) 2 protein:vir:1023 Length: 392 # 100.0 2E-101 1E-104 573.2 42.8 392 1-392 1-392 (392) 3 protein:vir:3989 Length: 392 # 100.0 2E-101 1E-104 573.2 42.8 392 1-392 1-392 (392) 4 protein:vir:4995 Length: 384 # 100.0 2.1E-87 1.3E-90 495.8 39.2 384 3-391 1-384 (384) 5 protein:vir:4854 Length: 386 # 100.0 6.5E-87 4E-90 493.1 39.4 384 3-391 1-386 (386) 6 protein:vir:4952 Length: 386 # 100.0 1.9E-86 1.2E-89 490.5 40.7 384 3-391 1-386 (386) 7 protein:vir:4828 Length: 382 # 100.0 3.1E-86 2E-89 489.3 39.9 381 3-391 1-382 (382) 8 protein:vir:100249 Length: 431 100.0 7.9E-84 4.9E-87 476.2 39.5 384 3-392 1-429 (431) 9 protein:vir:3843 Length: 397 # 100.0 5E-83 3.1E-86 471.8 39.5 380 3-392 1-396 (397) 10 protein:vir:9408 Length: 441 # 100.0 8.1E-83 5E-86 470.6 38.1 381 1-389 24-441 (441) 11 protein:vir:79984 Length: 441 100.0 8.1E-83 5E-86 470.6 38.1 381 1-389 24-441 (441) 12 protein:vir:81095 Length: 416 100.0 1.1E-82 6.9E-86 469.9 38.2 379 3-389 1-416 (416) 13 protein:vir:4598 Length: 416 # 100.0 1.1E-82 6.9E-86 469.9 38.2 379 3-389 1-416 (416) 14 protein:vir:98396 Length: 441 100.0 1.8E-82 1.1E-85 468.8 38.7 381 1-389 23-441 (441) 15 protein:vir:6240 Length: 457 # 100.0 8.1E-82 5E-85 465.2 40.3 389 3-392 1-421 (457) 16 protein:vir:81072 Length: 432 100.0 1.1E-81 6.8E-85 464.4 40.0 384 1-392 5-418 (432) 17 protein:vir:93610 Length: 454 100.0 7E-82 4.3E-85 465.5 38.4 387 5-392 1-426 (454) 18 protein:vir:1380 Length: 422 # 100.0 1.4E-81 8.8E-85 463.8 39.4 387 3-392 1-416 (422) 19 protein:vir:97060 Length: 432 100.0 1.4E-81 8.9E-85 463.8 39.3 384 1-392 5-418 (432) 20 protein:vir:107605 Length: 432 100.0 2.2E-81 1.3E-84 462.8 39.4 386 3-392 1-425 (432) 21 protein:vir:105002 Length: 432 100.0 2.2E-81 1.3E-84 462.8 39.4 386 3-392 1-425 (432) 22 protein:vir:102855 Length: 432 100.0 2.2E-81 1.3E-84 462.8 39.4 386 3-392 1-425 (432) 23 protein:vir:10362 Length: 432 100.0 7.4E-81 4.6E-84 459.9 39.5 384 1-392 5-418 (432) 24 protein:vir:81152 Length: 411 100.0 9E-81 5.6E-84 459.4 39.1 375 3-387 1-411 (411) 25 protein:vir:100150 Length: 437 100.0 8.5E-81 5.3E-84 459.6 38.8 384 1-392 1-415 (437) 26 protein:vir:1326 Length: 457 # 100.0 2.1E-80 1.3E-83 457.4 40.7 389 3-392 1-428 (457) 27 protein:vir:105064 Length: 421 100.0 5.5E-81 3.4E-84 460.6 36.4 374 3-392 1-411 (421) 28 protein:vir:7853 Length: 518 # 100.0 1.9E-80 1.2E-83 457.6 39.1 385 3-392 1-421 (518) 29 protein:vir:4337 Length: 434 # 100.0 2.2E-80 1.4E-83 457.3 39.4 386 1-392 1-432 (434) 30 protein:vir:101648 Length: 518 100.0 2.3E-80 1.4E-83 457.2 39.2 384 3-392 1-418 (518) 31 protein:vir:4454 Length: 414 # 100.0 2.5E-80 1.6E-83 457.0 39.2 379 3-392 1-412 (414) 32 protein:vir:1884 Length: 424 # 100.0 4E-80 2.5E-83 455.9 38.9 375 1-392 16-421 (424) 33 protein:vir:4509 Length: 424 # 100.0 1.6E-79 1E-82 452.5 40.1 377 1-392 14-416 (424) 34 protein:vir:102080 Length: 429 100.0 1.2E-79 7.3E-83 453.3 39.1 385 3-392 1-422 (429) 35 protein:vir:5737 Length: 419 # 100.0 6.7E-80 4.2E-83 454.6 37.6 375 3-392 1-405 (419) 36 protein:vir:1082 Length: 359 # 100.0 1.3E-79 8.1E-83 453.1 36.2 352 3-369 1-359 (359) 37 protein:vir:189 Length: 424 # 100.0 6.7E-79 4.1E-82 449.2 38.4 377 1-392 16-421 (424) 38 protein:vir:102118 Length: 409 100.0 7.5E-79 4.7E-82 448.9 38.3 371 3-387 1-409 (409) 39 protein:vir:483 Length: 413 # 100.0 9.5E-79 5.9E-82 448.3 38.4 378 3-392 1-403 (413) 40 protein:vir:1266 Length: 416 # 100.0 1E-78 6.4E-82 448.1 38.3 377 3-390 1-416 (416) 41 protein:vir:8418 Length: 409 # 100.0 1.6E-78 9.8E-82 447.1 39.0 378 3-392 1-401 (409) 42 protein:vir:1431 Length: 419 # 100.0 1.4E-78 8.9E-82 447.3 37.1 375 4-392 1-406 (419) 43 protein:vir:94666 Length: 723 100.0 3.4E-78 2.1E-81 445.3 36.3 363 24-392 1-401 (723) 44 protein:vir:80333 Length: 419 100.0 1E-77 6.2E-81 442.7 36.9 374 3-392 1-406 (419) 45 protein:vir:81218 Length: 423 100.0 2.1E-77 1.3E-80 440.9 37.2 383 3-392 1-418 (423) 46 protein:vir:8317 Length: 409 # 100.0 1.7E-77 1.1E-80 441.4 36.5 364 3-387 1-409 (409) 47 protein:vir:100187 Length: 385 100.0 5.2E-77 3.2E-80 438.8 38.3 373 3-390 1-385 (385) 48 protein:vir:3868 Length: 417 # 100.0 3.9E-77 2.4E-80 439.5 36.5 370 3-392 1-407 (417) 49 protein:vir:2683 Length: 412 # 100.0 8.4E-77 5.2E-80 437.7 38.1 379 3-392 1-412 (412) 50 protein:vir:8100 Length: 466 # 100.0 1.3E-76 8.4E-80 436.5 38.6 389 3-392 1-456 (466) 51 protein:vir:9702 Length: 406 # 100.0 2.5E-76 1.6E-79 435.0 37.0 368 3-392 1-398 (406) 52 protein:vir:93943 Length: 409 100.0 4.1E-76 2.5E-79 433.9 37.7 376 1-390 2-409 (409) 53 protein:vir:100882 Length: 383 100.0 7.2E-76 4.5E-79 432.5 38.4 370 3-388 1-383 (383) 54 protein:vir:94426 Length: 409 100.0 2.6E-75 1.6E-78 429.5 38.5 378 1-392 2-409 (409) 55 protein:vir:96980 Length: 409 100.0 2.1E-75 1.3E-78 430.0 37.8 378 1-392 2-409 (409) 56 protein:vir:101647 Length: 460 100.0 1.7E-74 1.1E-77 425.0 35.2 383 1-391 1-460 (460) 57 protein:vir:80134 Length: 403 100.0 1.4E-72 8.8E-76 414.5 35.7 364 3-389 1-403 (403) 58 protein:vir:104259 Length: 403 100.0 3.2E-72 2E-75 412.5 37.0 366 3-392 1-397 (403) 59 protein:vir:960 Length: 413 # 100.0 1E-71 6.3E-75 409.8 36.8 376 1-392 11-409 (413) 60 protein:vir:102727 Length: 945 100.0 1.4E-71 8.6E-75 409.1 36.7 389 1-392 60-521 (945) 61 protein:vir:95378 Length: 406 100.0 3.1E-71 1.9E-74 407.1 36.7 371 3-392 1-404 (406) 62 protein:vir:6210 Length: 394 # 100.0 1.1E-70 6.5E-74 404.2 34.4 360 3-390 1-394 (394) 63 protein:vir:4194 Length: 540 # 100.0 1.4E-67 8.4E-71 387.2 35.1 382 1-392 4-435 (540) 64 protein:vir:4156 Length: 542 # 100.0 3.1E-66 1.9E-69 379.8 35.5 378 5-392 1-432 (542) 65 protein:vir:80644 Length: 551 100.0 7.3E-66 4.5E-69 377.7 34.3 386 1-392 3-510 (551) 66 protein:vir:9359 Length: 348 # 100.0 2.8E-65 1.7E-68 374.5 34.3 318 67-392 1-348 (348) 67 protein:vir:95965 Length: 385 100.0 2.4E-65 1.5E-68 374.9 33.2 354 3-390 1-385 (385) 68 protein:vir:80796 Length: 574 100.0 1.9E-64 1.2E-67 369.9 36.1 387 1-392 25-513 (574) 69 protein:vir:63755 Length: 547 100.0 1E-64 6.4E-68 371.4 34.6 387 3-392 1-506 (547) 70 protein:vir:101289 Length: 395 100.0 8.8E-65 5.5E-68 371.8 34.2 355 3-392 1-380 (395) 71 protein:vir:9507 Length: 395 # 100.0 8.8E-65 5.5E-68 371.8 34.2 355 3-392 1-380 (395) 72 protein:vir:100650 Length: 395 100.0 8.8E-65 5.5E-68 371.8 34.2 355 3-392 1-380 (395) 73 protein:vir:78310 Length: 376 100.0 7.5E-65 4.6E-68 372.1 32.6 353 3-389 1-376 (376) 74 protein:vir:100691 Length: 535 100.0 1.7E-63 1E-66 364.7 36.1 385 3-392 1-484 (535) 75 protein:vir:3153 Length: 467 # 100.0 4.2E-63 2.6E-66 362.6 36.6 347 46-392 1-438 (467) 76 protein:vir:96579 Length: 576 100.0 9.9E-63 6.1E-66 360.5 38.1 390 1-392 27-516 (576) 77 protein:vir:4089 Length: 395 # 100.0 1.6E-63 9.8E-67 364.9 33.2 362 3-392 1-393 (395) 78 protein:vir:9641 Length: 395 # 100.0 6.8E-64 4.2E-67 366.9 30.8 360 3-392 1-394 (395) 79 protein:vir:98643 Length: 395 100.0 7.3E-62 4.5E-65 355.8 31.9 362 3-392 1-394 (395) 80 protein:vir:79772 Length: 648 100.0 1E-60 6.3E-64 349.5 37.4 370 1-392 57-479 (648) 81 protein:vir:99312 Length: 563 100.0 1.4E-60 8.5E-64 348.8 36.9 389 1-392 38-516 (563) 82 protein:vir:95599 Length: 563 100.0 1.4E-60 8.5E-64 348.8 36.9 389 1-392 38-516 (563) 83 protein:vir:94002 Length: 378 100.0 1.2E-60 7.5E-64 349.1 31.4 328 3-392 1-371 (378) 84 protein:vir:93867 Length: 378 100.0 1.2E-59 7.3E-63 343.6 31.2 328 3-392 1-372 (378) 85 protein:vir:1661 Length: 378 # 100.0 1.4E-59 8.8E-63 343.2 31.0 326 3-390 1-378 (378) 86 protein:vir:94869 Length: 378 100.0 2.8E-58 1.7E-61 336.1 31.0 328 3-392 1-372 (378) 87 protein:vir:858 Length: 378 # 100.0 1.5E-57 9.4E-61 332.1 31.4 328 3-392 1-372 (378) 88 protein:vir:99452 Length: 651 100.0 4.9E-56 3E-59 323.8 30.4 383 3-392 1-530 (651) 89 protein:vir:78641 Length: 278 100.0 2.4E-54 1.5E-57 314.6 28.7 259 67-333 1-278 (278) 90 protein:vir:79150 Length: 368 100.0 9E-51 5.6E-54 294.9 27.4 337 3-352 1-368 (368) 91 protein:vir:79207 Length: 351 100.0 2.6E-50 1.6E-53 292.4 29.5 312 3-340 1-351 (351) 92 protein:vir:103971 Length: 376 100.0 3.1E-50 1.9E-53 292.0 29.8 317 1-340 24-376 (376) 93 protein:vir:100328 Length: 346 100.0 2E-50 1.2E-53 293.1 26.6 319 3-338 1-346 (346) 94 protein:vir:98567 Length: 340 100.0 6.1E-50 3.8E-53 290.4 29.1 310 3-337 1-340 (340) 95 protein:vir:78191 Length: 351 100.0 1.2E-49 7.7E-53 288.7 29.4 312 3-340 1-351 (351) 96 protein:vir:4698 Length: 251 # 100.0 1.6E-50 9.8E-54 293.6 24.2 240 3-249 1-251 (251) 97 protein:vir:267 Length: 348 # 100.0 7.3E-49 4.5E-52 284.5 31.2 319 1-345 1-348 (348) 98 protein:vir:3743 Length: 345 # 100.0 1E-48 6.2E-52 283.7 30.8 310 9-335 1-345 (345) 99 protein:vir:3780 Length: 345 # 100.0 8.2E-49 5.1E-52 284.2 29.2 317 9-343 1-345 (345) 100 protein:vir:1150 Length: 350 # 100.0 2.2E-48 1.4E-51 281.8 28.8 321 3-348 1-350 (350) 101 protein:vir:6058 Length: 344 # 100.0 1.5E-48 9.1E-52 282.8 26.9 313 5-338 1-344 (344) 102 protein:vir:5691 Length: 344 # 100.0 4.1E-48 2.5E-51 280.4 28.5 312 3-338 1-344 (344) 103 protein:vir:78749 Length: 337 100.0 9E-48 5.6E-51 278.5 28.0 309 9-349 1-337 (337) 104 protein:vir:2013 Length: 344 # 100.0 3.2E-47 2E-50 275.5 28.2 315 3-339 1-344 (344) 105 protein:vir:98853 Length: 219 100.0 6E-39 3.7E-42 230.1 21.7 202 132-337 1-219 (219) 106 protein:vir:5249 Length: 437 # 99.9 3.3E-25 2.1E-28 154.8 29.8 372 1-392 1-436 (437) 107 protein:vir:79647 Length: 435 99.8 1.1E-20 6.8E-24 130.0 26.5 377 3-389 1-435 (435) 108 protein:vir:107742 Length: 537 99.8 6.7E-20 4.2E-23 125.7 28.0 377 1-392 33-512 (537) 109 protein:vir:104338 Length: 422 99.8 1.8E-19 1.1E-22 123.3 26.8 366 1-392 1-421 (422) 110 protein:vir:99563 Length: 862 99.8 1.8E-19 1.1E-22 123.4 26.5 371 1-392 91-545 (862) 111 protein:vir:107662 Length: 427 99.8 1.3E-19 8.1E-23 124.1 25.1 363 1-392 1-417 (427) 112 protein:vir:96068 Length: 765 99.7 4.2E-18 2.6E-21 115.9 27.6 380 1-392 38-527 (765) 113 protein:vir:94049 Length: 532 99.7 3.5E-18 2.2E-21 116.3 26.6 378 1-392 33-505 (532) 114 protein:vir:79538 Length: 502 99.7 1.7E-17 1.1E-20 112.5 28.4 389 3-392 1-495 (502) 115 protein:vir:80040 Length: 461 99.7 3.7E-18 2.3E-21 116.1 24.7 375 3-387 1-461 (461) 116 protein:vir:108215 Length: 469 99.7 7.6E-16 4.7E-19 103.5 32.3 378 5-392 1-459 (469) 117 protein:vir:99853 Length: 488 99.6 2.8E-14 1.7E-17 94.9 32.1 366 9-392 1-407 (488) 118 protein:vir:103860 Length: 528 99.6 3.4E-14 2.1E-17 94.4 31.7 374 3-392 1-445 (528) 119 protein:vir:389 Length: 530 # 99.6 6.4E-14 4E-17 92.9 31.0 388 1-392 1-523 (530) 120 protein:vir:107880 Length: 491 99.6 1.4E-13 8.5E-17 91.1 32.8 368 1-392 1-420 (491) 121 protein:vir:79063 Length: 491 99.6 8.3E-14 5.2E-17 92.3 31.6 367 1-392 1-415 (491) 122 protein:vir:3420 Length: 533 # 99.6 8.3E-14 5.2E-17 92.3 30.8 389 1-392 1-526 (533) 123 protein:vir:99232 Length: 526 99.5 3.1E-13 1.9E-16 89.1 32.7 369 3-392 1-446 (526) 124 protein:vir:1986 Length: 512 # 99.5 5.3E-13 3.3E-16 87.9 32.4 367 3-392 1-435 (512) 125 protein:vir:79233 Length: 526 99.5 6.7E-13 4.1E-16 87.3 31.6 369 3-392 1-443 (526) 126 protein:vir:95542 Length: 548 99.5 1.2E-13 7.6E-17 91.4 27.4 385 3-392 1-508 (548) 127 protein:vir:79511 Length: 448 99.5 4.2E-13 2.6E-16 88.4 29.8 366 9-392 1-436 (448) 128 protein:vir:77981 Length: 448 99.5 2E-12 1.3E-15 84.7 31.1 369 9-392 1-430 (448) 129 protein:vir:96738 Length: 505 99.5 6.4E-13 4E-16 87.4 27.8 385 1-392 6-503 (505) 130 protein:vir:6382 Length: 553 # 99.4 1.7E-12 1.1E-15 85.1 29.1 392 1-392 1-545 (553) 131 protein:vir:10321 Length: 495 99.4 5.6E-12 3.5E-15 82.3 28.6 381 3-392 1-488 (495) 132 protein:vir:105782 Length: 449 99.3 7.1E-12 4.4E-15 81.7 25.1 362 1-389 16-449 (449) 133 protein:vir:98816 Length: 446 99.3 9.1E-12 5.7E-15 81.1 25.3 365 1-379 1-446 (446) 134 protein:vir:95254 Length: 488 99.2 2.7E-10 1.7E-13 73.0 30.4 375 3-392 1-477 (488) 135 protein:vir:78161 Length: 355 99.2 2.3E-10 1.4E-13 73.4 25.9 276 110-392 1-330 (355) 136 protein:vir:106716 Length: 698 99.0 2.2E-10 1.4E-13 73.5 20.5 377 1-392 64-558 (698) 137 protein:vir:78589 Length: 695 99.0 8.2E-10 5.1E-13 70.4 23.0 377 1-392 64-548 (695) 138 protein:vir:101541 Length: 694 99.0 8.1E-10 5E-13 70.4 22.9 377 1-392 63-547 (694) 139 protein:vir:3648 Length: 695 # 99.0 8.9E-10 5.5E-13 70.2 22.6 377 1-392 64-553 (695) 140 protein:vir:98444 Length: 434 98.9 4.6E-09 2.9E-12 66.3 22.5 348 24-392 1-422 (434) 141 protein:vir:8654 Length: 629 # 98.8 7.6E-09 4.7E-12 65.1 20.0 382 1-392 1-516 (629) 142 protein:vir:99088 Length: 629 98.7 9E-09 5.6E-12 64.7 19.7 382 1-392 1-516 (629) 143 protein:vir:7768 Length: 484 # 98.7 7.2E-08 4.5E-11 59.7 25.0 373 1-392 16-478 (484) 144 protein:vir:99916 Length: 504 98.7 9.1E-08 5.6E-11 59.2 26.5 375 1-392 25-500 (504) 145 protein:vir:105819 Length: 456 98.7 5.5E-08 3.4E-11 60.4 22.2 377 1-392 9-452 (456) 146 protein:vir:102602 Length: 456 98.7 5.5E-08 3.4E-11 60.4 22.2 377 1-392 9-452 (456) 147 protein:vir:7987 Length: 456 # 98.7 3.1E-08 1.9E-11 61.8 20.7 377 1-392 9-452 (456) 148 protein:vir:102426 Length: 631 98.6 1.8E-08 1.1E-11 63.1 18.8 385 1-392 1-519 (631) 149 protein:vir:104082 Length: 485 98.6 1E-07 6.5E-11 58.9 22.9 370 1-392 16-473 (485) 150 protein:vir:9568 Length: 410 # 98.6 1.8E-07 1.1E-10 57.5 24.4 346 6-386 1-410 (410) 151 protein:vir:2427 Length: 485 # 98.6 2.1E-07 1.3E-10 57.2 23.3 370 1-392 16-477 (485) 152 protein:vir:106491 Length: 646 98.6 2.4E-08 1.5E-11 62.4 17.5 379 3-392 1-482 (646) 153 protein:vir:94742 Length: 409 98.5 3.8E-07 2.4E-10 55.8 27.2 342 1-372 1-409 (409) 154 protein:vir:80680 Length: 441 98.5 4.5E-07 2.8E-10 55.4 24.4 363 1-390 8-441 (441) 155 protein:vir:2341 Length: 488 # 98.4 2.9E-07 1.8E-10 56.4 20.4 372 1-392 12-485 (488) 156 protein:vir:4223 Length: 486 # 98.4 7.3E-07 4.6E-10 54.2 22.4 370 1-392 13-477 (486) 157 protein:vir:99072 Length: 479 98.4 7.6E-07 4.7E-10 54.1 24.4 368 1-392 9-468 (479) 158 protein:vir:103219 Length: 201 98.4 2.8E-08 1.7E-11 62.0 13.7 172 213-388 1-201 (201) 159 protein:vir:106027 Length: 629 98.4 2.8E-07 1.7E-10 56.5 19.1 383 1-392 1-486 (629) 160 protein:vir:79703 Length: 505 98.3 1.5E-06 9.2E-10 52.6 24.3 373 3-386 1-505 (505) 161 protein:vir:9751 Length: 422 # 98.2 2.9E-06 1.8E-09 50.9 25.9 354 1-384 1-422 (422) 162 protein:vir:3028 Length: 500 # 98.2 2.9E-06 1.8E-09 50.9 24.3 381 3-392 1-493 (500) 163 protein:vir:9815 Length: 500 # 98.2 2.9E-06 1.8E-09 50.9 24.3 381 3-392 1-493 (500) 164 protein:vir:4898 Length: 502 # 98.2 3.1E-06 1.9E-09 50.8 24.2 380 1-392 38-501 (502) 165 protein:vir:1634 Length: 409 # 98.2 3.3E-06 2E-09 50.7 26.3 342 1-372 1-409 (409) 166 protein:vir:38 Length: 496 # N 98.1 4.4E-06 2.7E-09 50.0 25.0 378 1-388 1-496 (496) 167 protein:vir:80959 Length: 499 98.0 7.6E-06 4.7E-09 48.7 23.7 380 1-391 1-499 (499) 168 protein:vir:5839 Length: 533 # 98.0 8.4E-06 5.2E-09 48.4 22.2 387 3-392 1-501 (533) 169 protein:vir:107517 Length: 639 98.0 3.3E-06 2E-09 50.6 16.7 384 1-392 1-520 (639) 170 protein:vir:97900 Length: 639 98.0 3.3E-06 2E-09 50.6 16.7 384 1-392 1-520 (639) 171 protein:vir:78537 Length: 480 97.9 1.3E-05 8E-09 47.4 25.4 369 3-392 1-458 (480) 172 protein:vir:2732 Length: 501 # 97.9 1.4E-05 8.8E-09 47.2 29.3 380 1-392 37-500 (501) 173 protein:vir:1587 Length: 508 # 97.8 1.5E-05 9.5E-09 47.0 25.9 376 3-389 1-508 (508) 174 protein:vir:79043 Length: 479 97.8 1.6E-05 9.8E-09 46.9 20.9 364 1-392 7-476 (479) 175 protein:vir:78227 Length: 480 97.8 1.6E-05 1E-08 46.8 26.1 370 3-392 1-471 (480) 176 protein:vir:106639 Length: 481 97.8 1.7E-05 1.1E-08 46.7 21.4 380 1-390 4-481 (481) 177 protein:vir:733 Length: 453 # 97.8 1.8E-05 1.1E-08 46.6 23.3 379 1-392 9-446 (453) 178 protein:vir:95113 Length: 474 97.8 1.8E-05 1.1E-08 46.6 24.7 365 5-392 1-470 (474) 179 protein:vir:93747 Length: 472 97.8 2.1E-05 1.3E-08 46.3 25.0 367 1-392 11-462 (472) 180 protein:vir:2500 Length: 501 # 97.8 2.2E-05 1.4E-08 46.1 26.4 362 1-392 31-491 (501) 181 protein:vir:1236 Length: 483 # 97.7 2.3E-05 1.4E-08 46.1 25.7 370 1-392 22-473 (483) 182 protein:vir:97336 Length: 492 97.7 2.4E-05 1.5E-08 45.9 24.9 364 1-392 44-482 (492) 183 protein:vir:5961 Length: 503 # 97.7 2.6E-05 1.6E-08 45.8 29.4 375 1-392 11-491 (503) 184 protein:vir:96839 Length: 474 97.7 3E-05 1.9E-08 45.4 20.4 363 1-392 26-467 (474) 185 protein:vir:4782 Length: 522 # 97.7 3E-05 1.9E-08 45.4 25.9 381 3-392 1-517 (522) 186 protein:vir:98883 Length: 517 97.7 3.1E-05 1.9E-08 45.3 26.5 372 3-392 1-513 (517) 187 protein:vir:94498 Length: 474 97.6 4.4E-05 2.8E-08 44.4 25.5 365 5-392 1-464 (474) 188 protein:vir:97447 Length: 474 97.6 4.4E-05 2.8E-08 44.4 25.5 365 5-392 1-464 (474) 189 protein:vir:95806 Length: 440 97.5 5.4E-05 3.4E-08 44.0 26.3 368 5-389 1-440 (440) 190 protein:vir:94101 Length: 474 97.4 6.6E-05 4.1E-08 43.5 27.5 371 1-392 19-469 (474) 191 protein:vir:105889 Length: 474 97.4 6.6E-05 4.1E-08 43.5 27.5 371 1-392 19-469 (474) 192 protein:vir:94805 Length: 492 97.4 6.6E-05 4.1E-08 43.5 25.7 369 1-392 43-483 (492) 193 protein:vir:97376 Length: 320 97.4 3.7E-06 2.3E-09 50.4 9.9 311 3-390 1-320 (320) 194 protein:vir:105292 Length: 478 97.4 7.9E-05 4.9E-08 43.1 24.8 360 2-392 1-473 (478) 195 protein:vir:78907 Length: 518 97.3 9.1E-05 5.6E-08 42.7 27.4 379 3-392 1-509 (518) 196 protein:vir:4073 Length: 279 # 97.3 4.4E-06 2.7E-09 49.9 8.8 267 51-372 1-279 (279) 197 protein:vir:96494 Length: 501 97.2 0.00013 8.3E-08 41.8 29.3 381 1-392 37-493 (501) 198 protein:vir:8184 Length: 474 # 97.1 0.00016 9.7E-08 41.5 29.6 369 1-389 19-474 (474) 199 protein:vir:9871 Length: 429 # 97.0 0.00022 1.4E-07 40.6 25.5 362 1-392 1-428 (429) 200 protein:vir:3964 Length: 453 # 96.9 0.00027 1.7E-07 40.1 27.4 374 1-392 17-450 (453) 201 protein:vir:99522 Length: 470 96.9 0.00027 1.7E-07 40.1 28.6 371 3-389 1-470 (470) 202 protein:vir:94546 Length: 506 96.8 0.00031 1.9E-07 39.9 21.3 378 1-392 1-494 (506) 203 protein:vir:97171 Length: 512 96.8 0.00033 2E-07 39.7 25.4 380 1-392 40-502 (512) 204 protein:vir:95899 Length: 474 96.8 0.00035 2.1E-07 39.6 24.3 367 1-392 31-468 (474) 205 protein:vir:96266 Length: 474 96.8 0.00035 2.1E-07 39.6 24.3 367 1-392 31-468 (474) 206 protein:vir:102950 Length: 471 96.4 0.00064 3.9E-07 38.1 21.6 369 1-392 1-471 (471) 207 protein:vir:96179 Length: 468 96.2 0.00092 5.7E-07 37.2 25.9 366 1-391 1-468 (468) 208 protein:vir:9306 Length: 511 # 95.8 0.0015 9.1E-07 36.1 27.4 380 1-392 40-501 (511) 209 protein:vir:96366 Length: 511 95.3 0.0024 1.5E-06 34.9 26.8 381 1-392 40-501 (511) 210 protein:vir:78805 Length: 511 95.3 0.0024 1.5E-06 34.9 26.8 381 1-392 40-501 (511) 211 protein:vir:106571 Length: 499 95.1 0.0027 1.7E-06 34.7 24.7 370 1-392 20-481 (499) 212 protein:vir:3609 Length: 452 # 95.0 0.003 1.8E-06 34.4 28.5 365 1-389 17-452 (452) 213 protein:vir:96240 Length: 511 94.9 0.0031 1.9E-06 34.3 27.9 381 1-392 40-501 (511) 214 protein:vir:107112 Length: 478 94.9 0.0032 2E-06 34.3 26.6 365 1-392 30-472 (478) 215 protein:vir:103951 Length: 511 94.1 0.0054 3.3E-06 33.0 29.2 381 1-392 40-507 (511) 216 protein:vir:99781 Length: 511 93.8 0.0065 4E-06 32.6 26.7 381 1-392 40-503 (511) 217 protein:vir:94956 Length: 452 90.5 0.02 1.3E-05 29.8 28.5 358 3-392 1-448 (452) 218 protein:vir:78083 Length: 537 88.9 0.03 1.8E-05 29.0 30.4 366 1-392 31-528 (537) 219 protein:vir:100598 Length: 516 87.9 0.036 2.2E-05 28.5 16.9 381 1-389 1-516 (516) 220 protein:vir:78393 Length: 489 87.7 0.037 2.3E-05 28.4 27.4 368 1-392 24-481 (489) 221 protein:vir:101189 Length: 516 85.6 0.052 3.2E-05 27.6 18.5 381 1-389 1-516 (516) 222 protein:vir:101806 Length: 516 85.6 0.052 3.2E-05 27.6 18.5 381 1-389 1-516 (516) 223 protein:vir:105461 Length: 470 85.5 0.052 3.2E-05 27.6 29.7 355 1-389 23-470 (470) 224 protein:vir:102668 Length: 547 82.8 0.074 4.6E-05 26.8 25.3 325 1-392 32-474 (547) 225 protein:vir:102330 Length: 451 72.1 0.19 0.00012 24.6 25.4 362 1-384 5-451 (451) 226 protein:vir:97265 Length: 513 71.3 0.2 0.00012 24.4 30.9 362 1-392 1-483 (513) 227 protein:vir:80453 Length: 535 70.4 0.21 0.00013 24.3 22.3 369 1-392 32-524 (535) 228 protein:vir:96783 Length: 488 67.6 0.25 0.00016 23.9 26.1 370 1-392 33-487 (488) 229 protein:vir:104892 Length: 558 64.6 0.3 0.00018 23.5 20.9 383 3-392 1-536 (558) 230 protein:vir:9922 Length: 489 # 63.4 0.32 0.0002 23.3 25.5 377 1-392 13-486 (489) 231 protein:vir:94709 Length: 522 61.9 0.35 0.00021 23.1 25.4 330 1-392 38-452 (522) 232 protein:vir:1538 Length: 535 # 55.8 0.47 0.00029 22.4 25.4 338 1-392 40-463 (535) 233 protein:vir:102239 Length: 527 54.0 0.51 0.00032 22.2 26.8 359 1-392 21-526 (527) 234 protein:vir:101494 Length: 527 53.6 0.52 0.00033 22.1 26.8 359 1-392 21-526 (527) 235 protein:vir:2198 Length: 536 # 51.7 0.57 0.00036 21.9 22.0 336 1-392 39-463 (536) 236 protein:vir:104500 Length: 537 51.6 0.58 0.00036 21.9 22.2 384 1-392 1-529 (537) 237 protein:vir:3361 Length: 535 # 49.1 0.65 0.0004 21.6 25.5 334 1-392 40-463 (535) 238 protein:vir:10447 Length: 536 48.5 0.67 0.00041 21.5 21.9 338 1-392 39-463 (536) 239 protein:vir:80165 Length: 651 46.1 0.75 0.00046 21.3 12.5 316 1-392 200-540 (651) 240 protein:vir:5665 Length: 511 # 44.8 0.79 0.00049 21.1 17.1 383 3-392 1-507 (511) 241 protein:vir:98265 Length: 524 32.8 1.4 0.00087 19.8 23.0 381 1-390 1-524 (524) 242 protein:vir:1785 Length: 555 # 32.1 1.5 0.0009 19.7 21.4 323 1-392 31-460 (555) 243 protein:vir:106999 Length: 564 30.8 1.5 0.00096 19.5 21.1 380 3-392 1-554 (564) 244 protein:vir:108049 Length: 524 29.1 1.7 0.001 19.3 17.2 382 1-390 1-524 (524) 245 protein:vir:106282 Length: 521 28.5 1.7 0.0011 19.3 18.9 382 1-390 1-521 (521) 246 protein:vir:8883 Length: 543 # 27.8 1.8 0.0011 19.2 24.2 328 1-392 40-457 (543) 247 protein:vir:94572 Length: 535 26.0 2 0.0012 18.9 24.4 336 1-392 41-454 (535) 248 protein:vir:95014 Length: 491 25.3 2.1 0.0013 18.8 27.0 370 1-392 24-483 (491) No 1 >protein:vir:7407 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:146 # MgeName: P335 # Cross-refs: genbank:acc:NP_839924;genbank:gi:30089894;genbank:GeneID:1260681 Probab=100.00 E-value=1.9e-102 Score=578.22 Aligned_cols=392 Identities=100% Similarity=1.439 Sum_probs=376.9 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~ 80 (392) |+||||+|+++...++..+.++.++..+.+..+++++.+.++..|+.++||++++|++||++||++||++|++++++..+ T Consensus 1 m~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~v~~ia~~ia~lp~~~~~~~~~ 80 (392) T protein:vir:74 1 MILPILNFINQTNDPPEAGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) T ss_pred CcchhhhhhhcccCcccccccccccccCchhhhhhhccCCCCcccchhhhhcchHHHHHHHHHHHhhccCceeeccchhh Confidence 99999999999988888888888888888888999999999999999999999999999999999999999999999999 Q ss_pred cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcceeeeEEE Q lcl|Aclame:pro 81 GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQA 160 (392) Q Consensus 81 ~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (392) .++.+||++||+++||+.++.+++++||+|++++|+.+|++++|+|++|++|++..+.+++.++|.++..+...+..+.+ T Consensus 81 ~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~~~~~~y~~~~~~~~~~~~~~~ 160 (392) T protein:vir:74 81 GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQA 160 (392) T ss_pred hhhhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEecCCccceeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999998888777888999 Q ss_pred eceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccC Q lcl|Aclame:pro 161 PQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRS 240 (392) Q Consensus 161 ~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (392) ++++|||++++++++..+|+||+.+++.+|..+.++++++.++|+||++|+|+++++++...+++.++++.+.+.+..|+ T Consensus 161 ~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~~~~~~~~~~~~~~~~~~~~n~ 240 (392) T protein:vir:74 161 PQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRS 240 (392) T ss_pred cCccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchHHHHHHHHHHHhccccC Confidence 99999999999999988999999999999999999999999999999999999999987777777788888999999999 Q ss_pred CceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 241 GGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEY 320 (392) Q Consensus 241 g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~ 320 (392) |+++||++|++|++++.+++|+||+|++++++++||++|||||++||+.++++++.++.++|++++|.|++++|+++|+. T Consensus 241 g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~e~~~~~~~~~l~p~~~~ie~~l~~ 320 (392) T protein:vir:74 241 GGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEY 320 (392) T ss_pred CCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999888888888899999999999999999999999 Q ss_pred HhhhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 321 KLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 321 ~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p~p 392 (392) +|++++++|.+.+++.|..++++.+++++++|++|+||+|+++.+.|++|+|+|+.+|++|+++||+|+|+| T Consensus 321 ~l~~~~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~near~~~~~~g~~pne~r~~enl~~~~~Gd~~~p~p 392 (392) T protein:vir:74 321 KLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPENTNKKTTGQSNEPVP 392 (392) T ss_pred hccchhcccchhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccchhcCCCCCCCCCCCCCCC Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 No 2 >protein:vir:1023 Length: 392 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:20 # MgeName: bIL286 # Cross-refs: genbank:acc:NP_076677;genbank:gi:13095786;genbank:GeneID:920364 Probab=100.00 E-value=1.6e-101 Score=573.16 Aligned_cols=392 Identities=100% Similarity=1.442 Sum_probs=377.6 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~ 80 (392) |+||||+++++.+++++.+.++.+++.+....++.++.+.++..|+.++||++|+|++||++||++||++|++++++..+ T Consensus 1 m~m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~ 80 (392) T protein:vir:10 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) T ss_pred CcchhhhhhhcccccccccccccccccCchhhhhhhhcCCCCceechHHhhccHHHHHHHHHHHHhhccCceeeccchhh Confidence 99999999999988888888888888888888999999999999999999999999999999999999999999999999 Q ss_pred cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcceeeeEEE Q lcl|Aclame:pro 81 GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQA 160 (392) Q Consensus 81 ~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (392) .++.+||++||+++||+.++.+++++||+|++++|+.+|++++|+|++|+.|++..+.+++.++|.++..+..++....+ T Consensus 81 ~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 160 (392) T protein:vir:10 81 GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQA 160 (392) T ss_pred hHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEecCcccceeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999888888888999 Q ss_pred eceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccC Q lcl|Aclame:pro 161 PQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRS 240 (392) Q Consensus 161 ~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (392) ++++|||++++++++..+|+||+.+++.++..+.+++++..++|+||++|+|+++++++...+++.++++.+.+.+..++ T Consensus 161 ~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (392) T protein:vir:10 161 PQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRS 240 (392) T ss_pred ccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchHHHHHHHHHHHhccccC Confidence 99999999999999988999999999999999999999999999999999999999988777777788888999999999 Q ss_pred CceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 241 GGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEY 320 (392) Q Consensus 241 g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~ 320 (392) |+++||++|++|++++.+++|+||+|++++++++||++|||||++||+.++++++.++.++|+++||.|++++|+++++. T Consensus 241 g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~~~~~~~~f~~~~l~P~~~~ie~~l~~ 320 (392) T protein:vir:10 241 GGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEY 320 (392) T ss_pred CCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999887778888889999999999999999999999 Q ss_pred HhhhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 321 KLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 321 ~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p~p 392 (392) +|++++++|.+.+++.+..++++.+++++++|++|+||+|+++.+.|++|+|+|+.++++|+++||+|+|+| T Consensus 321 ~L~~~~~~d~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~g~~p~e~r~~e~l~~~~~Gd~~~p~p 392 (392) T protein:vir:10 321 KLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPENTNKKTTGQSNEPVP 392 (392) T ss_pred hccccccccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHHhcCCCccccchhcCCCCCCCCCCCCCCC Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 No 3 >protein:vir:3989 Length: 392 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:319 # MgeName: BK5-T # Cross-refs: genbank:acc:NP_116497;genbank:gi:14251130;genbank:GeneID:921299 Probab=100.00 E-value=1.6e-101 Score=573.16 Aligned_cols=392 Identities=100% Similarity=1.442 Sum_probs=377.6 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~ 80 (392) |+||||+++++.+++++.+.++.+++.+....++.++.+.++..|+.++||++|+|++||++||++||++|++++++..+ T Consensus 1 m~m~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~ 80 (392) T protein:vir:39 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) T ss_pred CcchhhhhhhcccccccccccccccccCchhhhhhhhcCCCCceechHHhhccHHHHHHHHHHHHhhccCceeeccchhh Confidence 99999999999988888888888888888888999999999999999999999999999999999999999999999999 Q ss_pred cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcceeeeEEE Q lcl|Aclame:pro 81 GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQA 160 (392) Q Consensus 81 ~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (392) .++.+||++||+++||+.++.+++++||+|++++|+.+|++++|+|++|+.|++..+.+++.++|.++..+..++....+ T Consensus 81 ~l~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 160 (392) T protein:vir:39 81 GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQA 160 (392) T ss_pred hHhhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEecCcccceeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999888888888999 Q ss_pred eceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccC Q lcl|Aclame:pro 161 PQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRS 240 (392) Q Consensus 161 ~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (392) ++++|||++++++++..+|+||+.+++.++..+.+++++..++|+||++|+|+++++++...+++.++++.+.+.+..++ T Consensus 161 ~~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (392) T protein:vir:39 161 PQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRS 240 (392) T ss_pred ccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCchHHHHHHHHHHHhccccC Confidence 99999999999999988999999999999999999999999999999999999999988777777788888999999999 Q ss_pred CceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 241 GGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEY 320 (392) Q Consensus 241 g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~ 320 (392) |+++||++|++|++++.+++|+||+|++++++++||++|||||++||+.++++++.++.++|+++||.|++++|+++++. T Consensus 241 g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~~~~~~~~f~~~~l~P~~~~ie~~l~~ 320 (392) T protein:vir:39 241 GGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEY 320 (392) T ss_pred CCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999887778888889999999999999999999999 Q ss_pred HhhhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 321 KLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 321 ~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p~p 392 (392) +|++++++|.+.+++.+..++++.+++++++|++|+||+|+++.+.|++|+|+|+.++++|+++||+|+|+| T Consensus 321 ~L~~~~~~d~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~g~~p~e~r~~e~l~~~~~Gd~~~p~p 392 (392) T protein:vir:39 321 KLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPENTNKKTTGQSNEPVP 392 (392) T ss_pred hccccccccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHHhcCCCccccchhcCCCCCCCCCCCCCCC Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 No 4 >protein:vir:4995 Length: 384 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:109 # MgeName: Sfi21 # Cross-refs: genbank:acc:NP_049969;genbank:gi:9632941;genbank:GeneID:1262104 Probab=100.00 E-value=2.1e-87 Score=495.83 Aligned_cols=384 Identities=54% Similarity=0.910 Sum_probs=343.6 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQGI 82 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~~ 82 (392) ||||++.......+... .....+.....++..+ ..+..|+.++|+++++|++||++||+++|+||++++++..+.+ T Consensus 1 Mglf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~v~~~~al~~~~V~~~i~~Ia~~ia~l~~~~~~~~~~~l 76 (384) T protein:vir:49 1 MPIFNITNLATESPPSN--QDSFFDITDPEFLDAL--NGSEWVSAETALKNSDLFSIISQLSNDLATAKITTSRKQLQGI 76 (384) T ss_pred CccccccccCccccccc--chhhccccchhhcccc--cCCceechhhhhccHHHHHHHHHHHHHHhhCceeeecchhhhh Confidence 99999765443322211 1112223333444433 3467789999999999999999999999999999999999999 Q ss_pred cccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcceeeeEEEec Q lcl|Aclame:pro 83 IDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQ 162 (392) Q Consensus 83 ~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (392) +.+||++||+++|++.++.+++++||+|++++|+.+|++++|+|++|+.|++..+.+++.++|.+...+...+..+++++ T Consensus 77 ~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 156 (384) T protein:vir:49 77 VDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNQNGLYYNITFDDPRIPPKQHVPQ 156 (384) T ss_pred hhccCCCCCHHHHHHHHHHHhhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEecCccccceeEecC Confidence 99999999999999999999999999999999999999999999999999999988889999999888877788899999 Q ss_pred eeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCc Q lcl|Aclame:pro 163 SDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGG 242 (392) Q Consensus 163 ~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 242 (392) ++|||++++++++..+|+||+.+++..+..+.+++++..++|+||++|++++++++....+++ .+++...+.+..|+|+ T Consensus 157 ~eVih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~-~~~~~~~~~~~~n~~~ 235 (384) T protein:vir:49 157 GDILHFRLLSVDGGLTSVSPLMALGRELNIQKASDKLTLNALKNALNANGILKIKGGGLLDFK-TKQSRSRQAMKQMQGG 235 (384) T ss_pred ccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCChHHH-HHHHHHHHhcccCCcc Confidence 999999999999888999999999999999999999999999999999999999987665544 4456667788899999 Q ss_pred eeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 243 PVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKL 322 (392) Q Consensus 243 ~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l 322 (392) +++|++|++|++++.+++|+||+|++++++++||++|||||++||+..+.+++.++.++++..+++|++++|.++|+.+| T Consensus 236 ~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~~~~~~~~~~~i~~~l~pi~~~i~~~l 315 (384) T protein:vir:49 236 PLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESVVGGEGDKQSSLEMIYNIYFKAVSRFLRPFVSELSKKL 315 (384) T ss_pred ceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 99999999999999999999999999999999999999999999987777778888999999999999999999999999 Q ss_pred hhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccccCCCCCCCCCCCCCC Q lcl|Aclame:pro 323 SDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPENTNKKTTGQSNEPV 391 (392) Q Consensus 323 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p~ 391 (392) ++++..|.....+.+....+++++.++++|++|++|+|+++++.|++++|+|+.++++|++|||+++-= T Consensus 316 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~e~~~~l~~~g~~~ne~r~~~~~~p~~gGd~~~~~ 384 (384) T protein:vir:49 316 SCEVDADILPAVDPTGSNYIGLINSMVKTGTLAQNQGLYVLQQAEILPKDLPEGETDSTLKGGETNEQY 384 (384) T ss_pred chhhhhhhhhhhhccchHHHHHHHHHhhcCcccHHHHHHHHhhCCCCChhHHHHcCCCCCCCCCCCCCC Confidence 999988888888888889999999999999999999999999999999999999999999999997755 No 5 >protein:vir:4854 Length: 386 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:106 # MgeName: DT1 # Cross-refs: genbank:acc:NP_049394;genbank:gi:9632422;genbank:GeneID:1258515 Probab=100.00 E-value=6.5e-87 Score=493.09 Aligned_cols=384 Identities=54% Similarity=0.896 Sum_probs=339.4 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQGI 82 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~~ 82 (392) ||||+++++....+..+... +.......++..+ ..+..|+.++++++|+|++||++||++||+||++++++..+.+ T Consensus 1 M~~f~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~l 76 (386) T protein:vir:48 1 MPIFNITNLATESPPISQGG--FFDITDPDFLSTL--NGSEWVSAESALRNSDLFSIINQLSNDLATVKLTASRKQLQGI 76 (386) T ss_pred Cccccccccccccccccccc--ccccccchhcccc--cCCceechhhhhcchHHHHHHHHHHHhhccCceeeccchhHHH Confidence 99999887665544332222 1222222333332 3467799999999999999999999999999999999999999 Q ss_pred cccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcceeeeEEEec Q lcl|Aclame:pro 83 IDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQ 162 (392) Q Consensus 83 ~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (392) +.+||++||+++||+.++.+++++||+|++++|+.+|++++|+|++|+.|++..+.+++.++|.+..++...+..+.+++ T Consensus 77 ~~~pN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 156 (386) T protein:vir:48 77 IDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNKDGIYYNITFDDPRIPPKQHVPQ 156 (386) T ss_pred hhcCCCCCCHHHHHHHHHHHhhhcCcEEEEEEECCCCcEEEEEEecCceeEEEEcCCCceEEEEEEecCccccceeEecC Confidence 99999999999999999999999999999999999999999999999999999999888888888888777777889999 Q ss_pred eeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCc Q lcl|Aclame:pro 163 SDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGG 242 (392) Q Consensus 163 ~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 242 (392) ++|||++++++++.++|+||+..+..++..+.++++++.++|+||++|+|++++++..+++++.. .+.....+..++|+ T Consensus 157 ~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ii~~~~~~~~e~~~~-~~~~~~~~~~n~g~ 235 (386) T protein:vir:48 157 GDVLHFKLLSVDGGLTSVSPLMALSRELNIQKASDKLTLNSLKNALNANGILKIKGGGLLDFKTK-LSRSRQAMKQMQGG 235 (386) T ss_pred ccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHH-HHHHHHHhhcCCCC Confidence 99999999999998899999999999999999999999999999999999999998766554332 33334456778999 Q ss_pred eeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 243 PVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKL 322 (392) Q Consensus 243 ~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l 322 (392) ++||++|++|++++.+++|+||+|++++++++||++|||||.+||+.++++++.++..+|++.||.|+++.|+++|+++| T Consensus 236 ~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~e~~~~~~~~~~l~P~~~~ie~~l~~~l 315 (386) T protein:vir:48 236 PLVLDDLEEFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPENVVGGQGDQQSSLEMSLDLYNKAVSRYLRPFLSELSQKL 315 (386) T ss_pred ceecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhh Confidence 99999999999999999999999999999999999999999999987666677788899999999999999999999999 Q ss_pred hhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccccC--CCCCCCCCCCCCC Q lcl|Aclame:pro 323 SDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPEN--TNKKTTGQSNEPV 391 (392) Q Consensus 323 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~e~--~~~~~~gd~~~p~ 391 (392) ++++++|....++.+...+++.++.++++|++|+||+|+++++.|+.++|+|..+. .+|..|||.+.-- T Consensus 316 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~lg~~~~~~~~~~~~~~~~~~~~~gGd~~~~~ 386 (386) T protein:vir:48 316 SCDVDADILPAVDPTGSNSVSRINSMVKSGTLAQNQGLYILQQAEILPKELPEGENPNKTTLKGGEINGED 386 (386) T ss_pred cchhhcchhhhhccChHHHHHHHHHHHhCCCcCHHHHHHHhhcCCCCCccchhhcCCCCCccCCCCCCCCC Confidence 99999999999999999999999999999999999999999999999999998885 4677788765555 No 6 >protein:vir:4952 Length: 386 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:108 # MgeName: Sfi19 # Cross-refs: genbank:acc:NP_049928;genbank:gi:9632899;genbank:GeneID:1262075 Probab=100.00 E-value=1.9e-86 Score=490.49 Aligned_cols=384 Identities=54% Similarity=0.904 Sum_probs=338.1 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQGI 82 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~~ 82 (392) ||||+++++...+.... ...+.......++. ....+..|+.++++++|+|++||++||++||++|++++++..+.+ T Consensus 1 M~~f~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~l 76 (386) T protein:vir:49 1 MPIFNITNLATESPPIN--QESFFDIADSDFLA--SLNSSEWVSAENALKNSDLFSIISQLSNDLATAKITTSRKQLQGI 76 (386) T ss_pred CchhhhhccCCCCcccc--hhhhhhhhhccccc--cccCCceechhhhhccHHHHHHHHHHHHHhhhCceeeccchhhhh Confidence 99999987654433221 11111111111111 223467899999999999999999999999999999999999999 Q ss_pred cccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcceeeeEEEec Q lcl|Aclame:pro 83 IDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQ 162 (392) Q Consensus 83 ~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (392) +.+||++||+++||+.++.+++++||+|++++|+.+|++++|||++|+.|++..+.+++.++|.+...+..++..+.+++ T Consensus 77 ~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~l~~i~~~~v~v~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 156 (386) T protein:vir:49 77 VDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNDNGRDMKWEYLRPSQVSFNRLDNQNGLYYNITFDDPHIAPKQHVPQ 156 (386) T ss_pred hhccCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEecCceeEEEEcCCCceEEEEEEEcCccccceeEEcc Confidence 99999999999999999999999999999999999999999999999999999999999998888887777778889999 Q ss_pred eeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCc Q lcl|Aclame:pro 163 SDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGG 242 (392) Q Consensus 163 ~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 242 (392) ++|||++++++++..+|+|++..++..+..+.++.+++.++|+||++|++++++++...++++... ......+..|+|+ T Consensus 157 ~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~-~~~~~~~~~n~g~ 235 (386) T protein:vir:49 157 NDILHFRLLSVDGGLTSVSPLMALGREFNIQKASDKLTISALKNALNANGILKIKGGGLLDFKTKV-SRSRQAMKQMQGG 235 (386) T ss_pred ccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEeCCCCChHHHHHH-HHHHHHhccCCCC Confidence 999999999999988999999999999999999999999999999999999999987766554332 2233456678999 Q ss_pred eeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 243 PVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKL 322 (392) Q Consensus 243 ~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l 322 (392) ++||++|++|++++.+++|+||+|++++++++||++|||||++||+..+++++.++.++++..++.|++++|+++|+++| T Consensus 236 ~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~~~~~~~~~~i~~~l~~i~~~~~~~l 315 (386) T protein:vir:49 236 PLVLDDLEDFTPLEIKSNVAQLLSQADWTTGQFAKVYGIPESIVGGDGDQQSSLEMIYNIYFKSVSRYLRPFVSEMSKKL 315 (386) T ss_pred ceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 99999999999999999999999999999999999999999999987777777888899999999999999999999999 Q ss_pred hhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccccC--CCCCCCCCCCCCC Q lcl|Aclame:pro 323 SDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPEN--TNKKTTGQSNEPV 391 (392) Q Consensus 323 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~e~--~~~~~~gd~~~p~ 391 (392) ++++++|...+++.+..++++.+.+++++|++|+||+|++|++.|+.|+|+|..++ .++.+|||.++-. T Consensus 316 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~g~~t~nE~r~~l~~~~~~~~~~~~~~~~~~~~~~gGd~~~~~ 386 (386) T protein:vir:49 316 SCEVDVDISPAVDPTGSNYISLINSMVKSGTLAQNQGLYILQQAEILPKELPDGKNPNRTSLKGGEINEQD 386 (386) T ss_pred cchhcccchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHHhhCCCCCCcCcchhccCCCCCCCCCCCCCC Confidence 99999999999999999999999999999999999999999999999999998876 4667888877666 No 7 >protein:vir:4828 Length: 382 # NCBI annotation: ORF24 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:105 # MgeName: 7201 # Cross-refs: genbank:acc:NP_038325;genbank:gi:9634651;genbank:GeneID:1262630 Probab=100.00 E-value=3.1e-86 Score=489.34 Aligned_cols=381 Identities=54% Similarity=0.890 Sum_probs=337.4 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQGI 82 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~~ 82 (392) ||||+++.+...... ..........++.. ..++..|+.++++++|+|++||++||++||++|++++++..+.+ T Consensus 1 Mg~f~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~v~~~~~l~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~L 73 (382) T protein:vir:48 1 MPIFNLATESPPDNQ-----GGFFDVVDSDFLAS--LKGNEWVSAETALRNSDLFSIINQLSNDLATVKLITSRKKLQGI 73 (382) T ss_pred CccccccccCCcccc-----cccccchhhhcccc--ccCCcccchHhhhccHHHHHHHHHHHHhhccCceeeecchhhhh Confidence 999998765432211 11111222222222 23467899999999999999999999999999999999999999 Q ss_pred cccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcceeeeEEEec Q lcl|Aclame:pro 83 IDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQ 162 (392) Q Consensus 83 ~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (392) +.+||++||+++|++.++.+|+++||+|++++|+.+|++++|+|++|+.|++..+.+++.++|.+..++...+..+.+++ T Consensus 74 ~~~PN~~~t~~~f~~~l~~~l~l~Gna~~~i~rd~~G~~~~l~~i~~~~v~v~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 153 (382) T protein:vir:48 74 VDNPSNNANRFNFYQSIFAQMLLGGEAFAYRWRNENGRDMKWEYLRPSQVSFNRLDNKDGIYYNITFDDPRIPPKQHVPQ 153 (382) T ss_pred hhhcCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCCeEEEEEEecCccccceeEEcC Confidence 99999999999999999999999999999999999999999999999999999999999999988888877778889999 Q ss_pred eeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCc Q lcl|Aclame:pro 163 SDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGG 242 (392) Q Consensus 163 ~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 242 (392) ++|||++++++++..+|+||+.+++.++....++.++..++|+||++|+|++++++..+++++.+ .......+..|+|+ T Consensus 154 ~evih~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~e~~~~-~~~~~~~~~~n~g~ 232 (382) T protein:vir:48 154 NDVLHFRLLSVDGGMTSVSPLMALSRELDIQKASGNLTINSLKNALNANGILKIKGGGLLDFKTK-LSRSRQAMKQMQGG 232 (382) T ss_pred ccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCChHHHHH-HHHHHHhhccCCCC Confidence 99999999999998999999999999999999999999999999999999999998766554332 23333456678899 Q ss_pred eeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 243 PVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKL 322 (392) Q Consensus 243 ~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l 322 (392) ++|+++|++|++++.+++|+||+|++++.+++||++|||||.+||+.++++++.++.++|++.||+|++++|+++|+.+| T Consensus 233 ~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVp~~~lg~~~~~~~~~~~~~~~~~~~l~p~~~~i~~~l~~~l 312 (382) T protein:vir:48 233 PLVLDDLEDFTPLEIKSNVSQLLKQADWTTGQFAKVYGIPDNVVGGQGDQQSSLEMSSDLYSKAVSRYLRPFLSELSQKL 312 (382) T ss_pred eeEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 99999999999999999999999999999999999999999999988777777888999999999999999999999999 Q ss_pred hhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccccCC-CCCCCCCCCCCC Q lcl|Aclame:pro 323 SDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPENT-NKKTTGQSNEPV 391 (392) Q Consensus 323 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~e~~-~~~~~gd~~~p~ 391 (392) ++.++++....++.+....++++++++++|++|+||+|++|++.|+.|+++|..+++ ++++|||+++-- T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~e~r~~l~~~g~~~~~~~~~~~~~~~~~GGd~~~~~ 382 (382) T protein:vir:48 313 SCDVDADIFPAVDPTGSNYISRINSLVKTGTLAQNQGLYILQQAEILPKELPNGENPNSTLKGGEEDGQD 382 (382) T ss_pred cChhhhhhhhhhccchhHHHHHHHHHhhcCccCHHHHHHHHhhCCCCCcchhhhhcCCCCCCCCCCCCCC Confidence 999999988888889999999999999999999999999999999999999999886 778999876555 No 8 >protein:vir:100249 Length: 431 # NCBI annotation: gp78 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355414;genbank:gi:77864704;genbank:GeneID:3725971 Probab=100.00 E-value=7.9e-84 Score=476.19 Aligned_cols=384 Identities=15% Similarity=0.168 Sum_probs=309.7 Q ss_pred chhhHhhcccccccccccc--------cccccc-------cchhhhh-hhhc--CCCCcccchhhhhcchHHHHHHHHHH Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSV--------QSYFPD-------GNDAQIM-ESLL--GDNNEWVSARAALRNSDLFSIILQLS 64 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~--------~~~~~~-------~~~~~~~-~~~~--~~~~~~v~~~~a~~~~~v~~~i~~ia 64 (392) ||||++|++...+.+.... ..+... +...+.+ .++. ..++..|+.++||++++||+||++|| T Consensus 1 Mgl~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~V~~ci~~Ia 80 (431) T protein:vir:10 1 MGLFDFIRREKQPEAQARPHVEPSFQASTPTTSIPGETFEGLDDPRLKEYIRRGELNGGTGRETRALRNMAVLRCVTLIS 80 (431) T ss_pred CcchhhhhcCcccccccccccccccccccccccccccccccccchHHHHhhccCccCcceechhhhhccHHHHHHHHHHH Confidence 9999999876543321111 111111 1111112 2222 33567899999999999999999999 Q ss_pred HhhhhCceeeecccc-----------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccce Q lcl|Aclame:pro 65 SDLAIVKINAEKKKN-----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVN 133 (392) Q Consensus 65 ~~ia~~p~~~~~~~~-----------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~ 133 (392) ++||+||+++++++. ..++.+||++||+++||+.++.+++++||+|++|.|+. |++++|||++|..|+ T Consensus 81 ~~iA~lp~~v~~~~~~~~~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~-g~~~~L~pl~~~~v~ 159 (431) T protein:vir:10 81 GTIGMLPMNLISSDDSKQVLTDDPAHRLLKYKPNDWQTPMEFKSLMQLRALLDGESMARIVWSG-NRPIRLIPMDRGSAK 159 (431) T ss_pred HhhccCceEEEEecCceeeeccchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcC-CceEEEEEEcCceeE Confidence 999999999988642 13457999999999999999999999999999999984 899999999999999 Q ss_pred eeecCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE Q lcl|Aclame:pro 134 TYYFEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGV 213 (392) Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~i 213 (392) +..+.++... |.++.. .+..+.+++++|||+++++.++ .+|+||+..++.+|.++.+++++..++|+||++|+|+ T Consensus 160 ~~~~~~~~~~-y~~~~~---~g~~~~~~~~dViHir~~~~dg-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gi 234 (431) T protein:vir:10 160 GRLTSTWQIV-YDYTTP---TGDKIELPAREVFHLRDLSIDG-VSGVSRVKLSGNALELAEQAERAASRTFRTGVMAGGA 234 (431) T ss_pred EEEcCCCeEE-EEEEeC---CceEEEEchhhEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEE Confidence 9887665544 444432 2456789999999999988776 6799999999999999999999999999999999999 Q ss_pred EEeCCCCCchH--HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccc Q lcl|Aclame:pro 214 LTVKGGGLLSD--KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGD 291 (392) Q Consensus 214 l~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~ 291 (392) |++++..++++ +.++.|.+.+.|.+|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||+.++ T Consensus 235 l~~~~~ls~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~r~~~~~~Ia~~fgVPp~~lg~~~~ 314 (431) T protein:vir:10 235 IEVPKELSDNAYGRMKASVQENHTGSENAGSWMLLEEGATAKQFSNTAASAQQIENRNHQIEEVARMYGVPRPLLMMDDT 314 (431) T ss_pred EecCCCCCHHHHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCCCC Confidence 99998776663 4466778888999999999999999999999999999999999999999999999999999997644 Q ss_pred c-cc-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCC----cCHHH Q lcl|Aclame:pro 292 Q-QS-SIQQISGMYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGA----LAENQ 358 (392) Q Consensus 292 ~-~~-~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~----~T~nE 358 (392) + .+ .+++..+|+++||.|++++|+++|+++|++ +++||.+.+++.|.+++++.+.+++..|+ +|+|| T Consensus 315 ~t~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~~g~lT~NE 394 (431) T protein:vir:10 315 SWGSGIEQLAIFFIQYGLSHWFVSWEQAAARAFLPEKMLGQRQFKFNEGALLRGTLNDQAAFFSKALGAGGQSPWMKQNE 394 (431) T ss_pred CccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccChhhcCCceEEEechhhhccCHHHHHHHHHHHHhcccccCccCHHH Confidence 3 23 356788999999999999999999999964 37899999999999999999999987654 99999 Q ss_pred HHHHHHhCCCCc-cccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 359 ATFVLQEAGYIP-KDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 359 ~R~~l~~~g~~~-~e~~~~e~~~~~~~gd~~~p~p 392 (392) +|++++..+++. .-+.....++..+.|+.++|++ T Consensus 395 ~R~~~gl~p~~~~~gD~~~~p~n~~~~~~~~~~p~ 429 (431) T protein:vir:10 395 VREMLDLPRADDPVADQLRNPMTQKQKGSGDEPPA 429 (431) T ss_pred HHHHhCCCCCCCccccceecccccccCCCCCCCCC Confidence 999984444421 1122223445556677777766 No 9 >protein:vir:3843 Length: 397 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:322 # MgeName: phi adh # Cross-refs: genbank:acc:NP_050149;swissprot:trembl:q9t1f8;genbank:gi:9633041;uniprot:Q9T1F8;genbank:GeneID:1262206 Probab=100.00 E-value=5e-83 Score=471.77 Aligned_cols=380 Identities=48% Similarity=0.805 Sum_probs=327.2 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhh-hcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMES-LLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQG 81 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~ 81 (392) ||||++.++...... ..+..++.. ..+..+..|+.++||++++|++||++||++||++|+++.++.... T Consensus 1 M~~f~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~v~~~~al~~~~V~~~v~~ia~~ia~~p~~~~~~~~~~ 70 (397) T protein:vir:38 1 MPLLKLNKSHSQGFS----------LNDPDWVNFLTGGEAQKYVSADTALKNSDIFSLIMQLSGDLAMVRYTSESDRSQS 70 (397) T ss_pred CcchhhhhcccCccc----------CCchhhhhhhcCCcCCceechHHhhccHHHHHHHHHHHHHHhhCcccccccHHHH Confidence 999997664432111 111112222 234567889999999999999999999999999999999998999 Q ss_pred ccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcceeeeEEEe Q lcl|Aclame:pro 82 IIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAP 161 (392) Q Consensus 82 ~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (392) ++.+||++||+++||+.++.+++++||||++++|+.+|++++|+|++|+.|++..+.+++.++|.+++.....+..++++ T Consensus 71 l~~~PN~~~s~~~f~~~~~~~lll~Gna~~~i~r~~~g~~~~l~~l~~~~v~i~~~~~~~~~~y~~~~~~~~~~~~~~~~ 150 (397) T protein:vir:38 71 IISNPSVTANGYSFWQGMFAQLLLDGNCYAYRHKNTNGVDLSWEYLRPSQVQPMLLQDGSGLIYNINFDEPAIGYMENVP 150 (397) T ss_pred HHhcCCCCCCHHHHHHHHHHHhhhcCCEEEEEEECCCCcEEEEEEEcCceeEEEEcCCCceEEEEEEeccccccceeEec Confidence 99999999999999999999999999999999999999999999999999999999999988888888887778888999 Q ss_pred ceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHH-HHHHHHHHhccccC Q lcl|Aclame:pro 162 QSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKD-KASRSRSFMKRSRS 240 (392) Q Consensus 162 ~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~-~~~~~~~~~~~~~~ 240 (392) +++|||++++++++..+|+||+..+...+..+.++.++..++|+||++|+|++++++...++++. .++..+...+..|+ T Consensus 151 ~~eiih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~e~~~~~~~~~~~~~~~~n~ 230 (397) T protein:vir:38 151 AADVIHIRLLSKNGGKTGISPLSALINEQQIKDASNELTLKALKQSVTASAVLTIQKGGLLDAETRIARSKEISKQIHNS 230 (397) T ss_pred CccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHHHHHHHHHHhccccc Confidence 99999999999999889999999999999999999999999999999999999999877666433 23334455666889 Q ss_pred CceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 241 GGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEY 320 (392) Q Consensus 241 g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~ 320 (392) |+++|+++|++|++++.++.|+||+|++++++++||++|||||++||+.++++++.++.+.||..||+|++..|+++|+. T Consensus 231 ~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~afgVp~~~lg~~~~~~~~~e~~~~~~~~~l~P~~~~ie~~ln~ 310 (397) T protein:vir:38 231 DGPVVIDALEDYKPLEVKGNIASLLNQVDWTRDQIAKVYGVPDSYLNGQGDQQSSITQISGQYAKSLNRYVQAIVGELND 310 (397) T ss_pred CCceecCCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 99999999999999999999999999999999999999999999999877767777888899999999999999999999 Q ss_pred HhhhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccccCC-------CCCCCCCCCC---- Q lcl|Aclame:pro 321 KLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPENT-------NKKTTGQSNE---- 389 (392) Q Consensus 321 ~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~e~~-------~~~~~gd~~~---- 389 (392) +|++.++++++..++.+.+++++.+..++++|++|+||+|++++..|++++|++..+.. .+..+|+.+. T Consensus 311 ~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~G~~t~nE~R~~lg~~p~~~~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 390 (397) T protein:vir:38 311 KLHANISANIRFAIDAMGDQYASTISSSVKGGTIAGNQARFILQNSGYLAKDLPDPEKEPQQAIQLIQQEGGENDGNNSD 390 (397) T ss_pred hccChhcccccccccCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCccccccccccccccccccccCCCCCCCCC Confidence 99999999999999999999999999999999999999999998888777776554432 1222222111 Q ss_pred ---CCC Q lcl|Aclame:pro 390 ---PVP 392 (392) Q Consensus 390 ---p~p 392 (392) ..| T Consensus 391 e~~~~~ 396 (397) T protein:vir:38 391 ERGSDP 396 (397) T ss_pred CCCCCC Confidence 112 No 10 >protein:vir:9408 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:167 # MgeName: phi 13 # Cross-refs: genbank:acc:NP_803386;genbank:gi:29028698;genbank:GeneID:1258164 Probab=100.00 E-value=8.1e-83 Score=470.63 Aligned_cols=381 Identities=19% Similarity=0.221 Sum_probs=308.7 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc- Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN- 79 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~- 79 (392) .-||+|.+..++.- ..+..+.......+..+.+..+..|+.+.||++++||+||++||++||+||++++++.. T Consensus 24 ~~~~lf~~~e~R~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~~cv~~Ia~~iA~lp~~~~~~~~~ 97 (441) T protein:vir:94 24 VVVGIFYKNEKRDL------QYNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQI 97 (441) T ss_pred hccccccccccccc------cCCCcchHHHHHHhcccCcccccccchhhhhccHHHHHHHHHHHHhhccCceeeecCccc Confidence 23466643332211 10101000111122233445566799999999999999999999999999999987532 Q ss_pred -------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCc Q lcl|Aclame:pro 80 -------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDP 152 (392) Q Consensus 80 -------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 152 (392) ..++.+||++||+++||+.++.+++++||||++++|+.+|+|++|+|++|+.|++..+.++...++.+..+.. T Consensus 98 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~g~~~~~~~~~~~~ 177 (441) T protein:vir:94 98 NYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSN 177 (441) T ss_pred cccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEEEEeccC Confidence 2356799999999999999999999999999999999999999999999999999998887777666666666 Q ss_pred ceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH---HHHHH Q lcl|Aclame:pro 153 KIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD---KDKAS 229 (392) Q Consensus 153 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~---~~~~~ 229 (392) ..+....+++++|||+++.+.++ ++|+||+..++.+|+++.+++++..++|+||++|+|||++++...+++ +.++. T Consensus 178 ~~~~~~~~~~~dvih~k~~~~dg-~~G~spl~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~e~~e~~r~~ 256 (441) T protein:vir:94 178 GNNIERNVKFEDMLDIKFYSLDG-INGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREE 256 (441) T ss_pred CceeEEEEccccEEEeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCCHHHHHHHHHH Confidence 66677889999999999987776 689999999999999999999999999999999999999998765443 33567 Q ss_pred HHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 RSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNR 309 (392) Q Consensus 230 ~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p 309 (392) +.+.+.|..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||....++ +.++...+|..||.| T Consensus 257 ~~~~~~G~~nag~~~vl~~G~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~-s~~q~~~~~~~tl~P 335 (441) T protein:vir:94 257 FHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETANM-SITDANLDYLSTLKP 335 (441) T ss_pred HHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCCCCc-cHHHHHHHHHHHHHH Confidence 8888899999999999999999999999999999999999999999999999999999754444 344555567789999 Q ss_pred HHHHHHHHHHHHhhh-----hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc-cccccC----- Q lcl|Aclame:pro 310 YLRPAISELEYKLSD-----HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD-LPAPEN----- 378 (392) Q Consensus 310 ~l~~i~~~l~~~l~~-----~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e-~~~~e~----- 378 (392) ++++|+++|+.+|.+ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++..| ....-+ T Consensus 336 ~~~~ie~eln~kl~~~~~~~~~~fd~~~llr~D~~~~~~~~~~~i~~G~~T~NE~R~~~gl~Pi~ggd~~~~~~~~n~~~ 415 (441) T protein:vir:94 336 YITCVCAELNFKFNDEYVNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHVN 415 (441) T ss_pred HHHHHHHHHhhhccccccCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeecccccc Confidence 999999999999964 578999999999999999999999999999999999998555544322 111111 Q ss_pred ---------------CCCCCCCCCCC Q lcl|Aclame:pro 379 ---------------TNKKTTGQSNE 389 (392) Q Consensus 379 ---------------~~~~~~gd~~~ 389 (392) -.+..||+.|| T Consensus 416 ~~~~~~~~~~~~~~~~~~~kgGe~~e 441 (441) T protein:vir:94 416 IELVDEYQMNKSRATDKKLKGGEENE 441 (441) T ss_pred cccccccccccccccccccCCCCCCC Confidence 12345777777 No 11 >protein:vir:79984 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1875 # MgeName: tp310-3 # Cross-refs: genbank:acc:YP_001430000;genbank:gi:156604055;genbank:GeneID:5525444 Probab=100.00 E-value=8.1e-83 Score=470.63 Aligned_cols=381 Identities=19% Similarity=0.221 Sum_probs=308.7 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc- Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN- 79 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~- 79 (392) .-||+|.+..++.- ..+..+.......+..+.+..+..|+.+.||++++||+||++||++||+||++++++.. T Consensus 24 ~~~~lf~~~e~R~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~~cv~~Ia~~iA~lp~~~~~~~~~ 97 (441) T protein:vir:79 24 VVVGIFYKNEKRDL------QYNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQI 97 (441) T ss_pred hccccccccccccc------cCCCcchHHHHHHhcccCcccccccchhhhhccHHHHHHHHHHHHhhccCceeeecCccc Confidence 23466643332211 10101000111122233445566799999999999999999999999999999987532 Q ss_pred -------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCc Q lcl|Aclame:pro 80 -------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDP 152 (392) Q Consensus 80 -------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 152 (392) ..++.+||++||+++||+.++.+++++||||++++|+.+|+|++|+|++|+.|++..+.++...++.+..+.. T Consensus 98 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~g~~~~~~~~~~~~ 177 (441) T protein:vir:79 98 NYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSN 177 (441) T ss_pred cccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEEEEeccC Confidence 2356799999999999999999999999999999999999999999999999999998887777666666666 Q ss_pred ceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH---HHHHH Q lcl|Aclame:pro 153 KIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD---KDKAS 229 (392) Q Consensus 153 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~---~~~~~ 229 (392) ..+....+++++|||+++.+.++ ++|+||+..++.+|+++.+++++..++|+||++|+|||++++...+++ +.++. T Consensus 178 ~~~~~~~~~~~dvih~k~~~~dg-~~G~spl~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~e~~e~~r~~ 256 (441) T protein:vir:79 178 GNNIERNVKFEDMLDIKFYSLDG-INGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREE 256 (441) T ss_pred CceeEEEEccccEEEeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCCHHHHHHHHHH Confidence 66677889999999999987776 689999999999999999999999999999999999999998765443 33567 Q ss_pred HHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 RSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNR 309 (392) Q Consensus 230 ~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p 309 (392) +.+.+.|..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||....++ +.++...+|..||.| T Consensus 257 ~~~~~~G~~nag~~~vl~~G~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~-s~~q~~~~~~~tl~P 335 (441) T protein:vir:79 257 FHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETANM-SITDANLDYLSTLKP 335 (441) T ss_pred HHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCCCCc-cHHHHHHHHHHHHHH Confidence 8888899999999999999999999999999999999999999999999999999999754444 344555567789999 Q ss_pred HHHHHHHHHHHHhhh-----hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc-cccccC----- Q lcl|Aclame:pro 310 YLRPAISELEYKLSD-----HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD-LPAPEN----- 378 (392) Q Consensus 310 ~l~~i~~~l~~~l~~-----~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e-~~~~e~----- 378 (392) ++++|+++|+.+|.+ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++..| ....-+ T Consensus 336 ~~~~ie~eln~kl~~~~~~~~~~fd~~~llr~D~~~~~~~~~~~i~~G~~T~NE~R~~~gl~Pi~ggd~~~~~~~~n~~~ 415 (441) T protein:vir:79 336 YITCVCAELNFKFNDEYVNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHVN 415 (441) T ss_pred HHHHHHHHHhhhccccccCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeecccccc Confidence 999999999999964 578999999999999999999999999999999999998555544322 111111 Q ss_pred ---------------CCCCCCCCCCC Q lcl|Aclame:pro 379 ---------------TNKKTTGQSNE 389 (392) Q Consensus 379 ---------------~~~~~~gd~~~ 389 (392) -.+..||+.|| T Consensus 416 ~~~~~~~~~~~~~~~~~~~kgGe~~e 441 (441) T protein:vir:79 416 IELVDEYQMNKSRATDKKLKGGEENE 441 (441) T ss_pred cccccccccccccccccccCCCCCCC Confidence 12345777777 No 12 >protein:vir:81095 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1891 # MgeName: tp310-1 # Cross-refs: genbank:acc:YP_001429872;genbank:gi:156603925;genbank:GeneID:5525315 Probab=100.00 E-value=1.1e-82 Score=469.88 Aligned_cols=379 Identities=20% Similarity=0.235 Sum_probs=312.1 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||++..++.-......... ....+..+.+..+..|+...||++++||+||++||+++|++|++++++.. T Consensus 1 Mg~f~~~~~r~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~al~~~~v~~cv~~Ia~~iA~~p~~~~~~~~~~~ 74 (416) T protein:vir:81 1 MGIFYKNEKRDLQYNEDDLQM------MVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQINY 74 (416) T ss_pred CCcccccccccccCCCcchhH------HHHHhccccccCccccchhhhhcchHHHHHHHHHHHhhccCceEEecCccccc Confidence 999987654432111100000 00112223455677899999999999999999999999999999987542 Q ss_pred -----ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcce Q lcl|Aclame:pro 80 -----QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKI 154 (392) Q Consensus 80 -----~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~ 154 (392) ..++.+||++||+++||+.++.+++++||+|++++|+.+|+|++|||++|+.|++..+.++...+++..++.... T Consensus 75 ~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~~~ 154 (416) T protein:vir:81 75 SDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGN 154 (416) T ss_pred cchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEEEEecCCCc Confidence 235679999999999999999999999999999999999999999999999999999887777766666666666 Q ss_pred eeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH---HHHHHHH Q lcl|Aclame:pro 155 EPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD---KDKASRS 231 (392) Q Consensus 155 ~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~---~~~~~~~ 231 (392) +....+++++|||+++.+.++ ++|+||+..++.++..+.++++++.++|+||++|+|++++++...+++ +.++.+. T Consensus 155 ~~~~~~~~~evihir~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~~~~~~ 233 (416) T protein:vir:81 155 NIERNVKFEDMLDIKFYSLDG-INGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFH 233 (416) T ss_pred eeEEEEccccEEEeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHHHHHHH Confidence 677889999999999987766 689999999999999999999999999999999999999998765443 3356778 Q ss_pred HHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 232 RSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYL 311 (392) Q Consensus 232 ~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l 311 (392) +.+.|..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||+++|....+ ++.++...+|..||.|++ T Consensus 234 ~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~-~~~~~~~~~~~~~l~P~~ 312 (416) T protein:vir:81 234 KSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETAN-MSITDANLDYLSTLKPYI 312 (416) T ss_pred HHhcCccccCceeecCCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCC-ccHHHHHHHHHHHHHHHH Confidence 8888999999999999999999999999999999999999999999999999999975443 344555666778999999 Q ss_pred HHHHHHHHHHhhh-----hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc-ccc--------cc Q lcl|Aclame:pro 312 RPAISELEYKLSD-----HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD-LPA--------PE 377 (392) Q Consensus 312 ~~i~~~l~~~l~~-----~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e-~~~--------~e 377 (392) .+|+++|+.+|.+ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++..+ ... ++ T Consensus 313 ~~ie~~ln~~l~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~~gd~~~~~~~~n~~~~~ 392 (416) T protein:vir:81 313 TCVCAELNFKFNDEYVNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHVNIE 392 (416) T ss_pred HHHHHHHhhhccccccCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeecccccccc Confidence 9999999999964 578999999999999999999999999999999999998655544222 110 11 Q ss_pred ------------CCCCCCCCCCCC Q lcl|Aclame:pro 378 ------------NTNKKTTGQSNE 389 (392) Q Consensus 378 ------------~~~~~~~gd~~~ 389 (392) +-.+..|||.|| T Consensus 393 ~~~~~~~~~~~~~~~~~kgGe~n~ 416 (416) T protein:vir:81 393 LVDEYQMNKSRATDKKLKGGEENE 416 (416) T ss_pred cccccCcccccccccccCCCCCCC Confidence 112456888888 No 13 >protein:vir:4598 Length: 416 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:101 # MgeName: PVL # Cross-refs: genbank:acc:NP_058443;genbank:gi:9635169;genbank:GeneID:1262702 Probab=100.00 E-value=1.1e-82 Score=469.88 Aligned_cols=379 Identities=20% Similarity=0.235 Sum_probs=312.1 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||++..++.-......... ....+..+.+..+..|+...||++++||+||++||+++|++|++++++.. T Consensus 1 Mg~f~~~~~r~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~al~~~~v~~cv~~Ia~~iA~~p~~~~~~~~~~~ 74 (416) T protein:vir:45 1 MGIFYKNEKRDLQYNEDDLQM------MVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQINY 74 (416) T ss_pred CCcccccccccccCCCcchhH------HHHHhccccccCccccchhhhhcchHHHHHHHHHHHhhccCceEEecCccccc Confidence 999987654432111100000 00112223455677899999999999999999999999999999987542 Q ss_pred -----ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcce Q lcl|Aclame:pro 80 -----QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKI 154 (392) Q Consensus 80 -----~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~ 154 (392) ..++.+||++||+++||+.++.+++++||+|++++|+.+|+|++|||++|+.|++..+.++...+++..++.... T Consensus 75 ~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~~~ 154 (416) T protein:vir:45 75 SDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGN 154 (416) T ss_pred cchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEECCCccEEEEEEEecCCCc Confidence 235679999999999999999999999999999999999999999999999999999887777766666666666 Q ss_pred eeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH---HHHHHHH Q lcl|Aclame:pro 155 EPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD---KDKASRS 231 (392) Q Consensus 155 ~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~---~~~~~~~ 231 (392) +....+++++|||+++.+.++ ++|+||+..++.++..+.++++++.++|+||++|+|++++++...+++ +.++.+. T Consensus 155 ~~~~~~~~~evihir~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~~~~~~ 233 (416) T protein:vir:45 155 NIERNVKFEDMLDIKFYSLDG-INGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFH 233 (416) T ss_pred eeEEEEccccEEEeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHHHHHHH Confidence 677889999999999987766 689999999999999999999999999999999999999998765443 3356778 Q ss_pred HHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 232 RSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYL 311 (392) Q Consensus 232 ~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l 311 (392) +.+.|..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||+++|....+ ++.++...+|..||.|++ T Consensus 234 ~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~-~~~~~~~~~~~~~l~P~~ 312 (416) T protein:vir:45 234 KSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETAN-MSITDANLDYLSTLKPYI 312 (416) T ss_pred HHhcCccccCceeecCCCceeEeccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCC-ccHHHHHHHHHHHHHHHH Confidence 8888999999999999999999999999999999999999999999999999999975443 344555666778999999 Q ss_pred HHHHHHHHHHhhh-----hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc-ccc--------cc Q lcl|Aclame:pro 312 RPAISELEYKLSD-----HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD-LPA--------PE 377 (392) Q Consensus 312 ~~i~~~l~~~l~~-----~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e-~~~--------~e 377 (392) .+|+++|+.+|.+ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++..+ ... ++ T Consensus 313 ~~ie~~ln~~l~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~~gd~~~~~~~~n~~~~~ 392 (416) T protein:vir:45 313 TCVCAELNFKFNDEYVNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHVNIE 392 (416) T ss_pred HHHHHHHhhhccccccCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeecccccccc Confidence 9999999999964 578999999999999999999999999999999999998655544222 110 11 Q ss_pred ------------CCCCCCCCCCCC Q lcl|Aclame:pro 378 ------------NTNKKTTGQSNE 389 (392) Q Consensus 378 ------------~~~~~~~gd~~~ 389 (392) +-.+..|||.|| T Consensus 393 ~~~~~~~~~~~~~~~~~kgGe~n~ 416 (416) T protein:vir:45 393 LVDEYQMNKSRATDKKLKGGEENE 416 (416) T ss_pred cccccCcccccccccccCCCCCCC Confidence 112456888888 No 14 >protein:vir:98396 Length: 441 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1581 # MgeName: phiPVL(108) # Cross-refs: genbank:acc:YP_918929;genbank:gi:119443691;genbank:GeneID:4594558 Probab=100.00 E-value=1.8e-82 Score=468.80 Aligned_cols=381 Identities=19% Similarity=0.229 Sum_probs=309.1 Q ss_pred Cc-chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc Q lcl|Aclame:pro 1 MI-LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN 79 (392) Q Consensus 1 m~-Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~ 79 (392) |+ ||+|.+..++. .................+++.++..|+.+.||++++||+||++||++||+||++++++.. T Consensus 23 ~~~~~~f~~~e~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~V~acv~~Ia~~iA~lpl~~~~~~~ 96 (441) T protein:vir:98 23 LVVVGIFYKNEKRD------LQYNEDDLQMMVQTLPGFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQ 96 (441) T ss_pred hhcccccccccccc------ccCCCcchHHHHHHhhcccccCccccchhhhhccHHHHHHHHHHHHhhccCceEEecCCc Confidence 32 35554333221 100101001111112234455677899999999999999999999999999999997542 Q ss_pred --------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecC Q lcl|Aclame:pro 80 --------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDD 151 (392) Q Consensus 80 --------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~ 151 (392) ..++.+||++||+++||+.++.+++++||+|++++|+.+|+|++|||++|+.|++..+.++...++++..+. T Consensus 97 ~~~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~ 176 (441) T protein:vir:98 97 INYSDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKLDARGRLYYFHQRIDS 176 (441) T ss_pred ccccchHHHHHhcccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCceeEEEECCCCcEEEEEEEecc Confidence 245679999999999999999999999999999999999999999999999999999888777777666666 Q ss_pred cceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH---HHHH Q lcl|Aclame:pro 152 PKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD---KDKA 228 (392) Q Consensus 152 ~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~---~~~~ 228 (392) ...+....+++++|||+++++.++ ++|+||+..++.++..+.++++++.++|+||++|+|+|++++...+++ +.++ T Consensus 177 ~~~~~~~~~~~~dviHir~~~~dg-~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~~~~~~e~~~~~~~ 255 (441) T protein:vir:98 177 NGNNIERNVKFEDMLDIKFYSLDG-INGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRARE 255 (441) T ss_pred CcceeeEEEccccEEEeccCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCCHHHHHHHHH Confidence 666677889999999999987776 679999999999999999999999999999999999999998765433 3356 Q ss_pred HHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHH Q lcl|Aclame:pro 229 SRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALN 308 (392) Q Consensus 229 ~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~ 308 (392) .|.+.+.|..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||....+++ .++...+|..||. T Consensus 256 ~~~~~~~G~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~~~~s-~~q~~~~y~~tl~ 334 (441) T protein:vir:98 256 EFHKSFSGTKQAGKVVVLDESMTFDQLEVDTEVLKLIRENKSSTREIAGVFGIPLHKFGIETANMS-ITDANLDYLSTLK 334 (441) T ss_pred HHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCCCCcc-HHHHHHHHHHHHH Confidence 778888999999999999999999999999999999999999999999999999999997544444 4444555667999 Q ss_pred HHHHHHHHHHHHHhhh-----hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc-cccc------ Q lcl|Aclame:pro 309 RYLRPAISELEYKLSD-----HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD-LPAP------ 376 (392) Q Consensus 309 p~l~~i~~~l~~~l~~-----~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e-~~~~------ 376 (392) |++.+|+++|+.+|.+ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++..| .... T Consensus 335 P~~~~ie~~ln~~L~~~~~~~~~~fd~~~llr~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~pi~gGd~~~~~~~~n~~ 414 (441) T protein:vir:98 335 PYITCVCAELNFKFNDEYVNREFKFDTTEIRVVDEKTQAEIDKINIDSGKMNIDEIRQRDGLAPIPGGNGSIHRVDLNHV 414 (441) T ss_pred HHHHHHHHHHHhhccccccCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCcceEeeccccc Confidence 9999999999999964 578999999999999999999999999999999999998555554322 1111 Q ss_pred --c------------CCCCCCCCCCCC Q lcl|Aclame:pro 377 --E------------NTNKKTTGQSNE 389 (392) Q Consensus 377 --e------------~~~~~~~gd~~~ 389 (392) + +-....|||+|+ T Consensus 415 ~~~~~~~~q~~~~~~~~~~~kgGe~ne 441 (441) T protein:vir:98 415 NIELVDEYQMNKSRATDKKLKGGEENE 441 (441) T ss_pred ccccccccccccccccccccCCCCCCC Confidence 1 012346788888 No 15 >protein:vir:6240 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:131 # MgeName: phi-BT1 # Cross-refs: genbank:acc:NP_813694;swissprot:trembl:q859c3;genbank:gi:29366754;interpro:IPR006427;interpro:IPR006944;uniprot:Q859C3;genbank:GeneID:1258894 Probab=100.00 E-value=8.1e-82 Score=465.16 Aligned_cols=389 Identities=14% Similarity=0.172 Sum_probs=305.3 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhh-cCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESL-LGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN-- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~-- 79 (392) ||||++++++..++.................+..+ ...+|+.|+.++||++++||+||++||++||+||++++++.. T Consensus 1 Mg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~ia~~iA~lp~~~~~~~~~~ 80 (457) T protein:vir:62 1 MGFWSALFGRGHSPALDAAEGRAWEPYDPSIYNLGATASSGERVTPHDALQVSAVFASVRLLSETIATLPLSTYSKRGGT 80 (457) T ss_pred CchhhhhhccccccccccccccccccchhhhhhccccccCCceechHHhhccHHHHHHHHHHHHhHhhCceEEEEecCCc Confidence 99999887655443322211111111222222222 234678899999999999999999999999999999997543 Q ss_pred ---------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccc---eEEEEE Q lcl|Aclame:pro 80 ---------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN---GMYYNI 147 (392) Q Consensus 80 ---------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~---~~~~~~ 147 (392) ..++.+||++||+++||+.++.+++++||+|++|.++ .|++.+||||+|+.|++..+..++ ..++.| T Consensus 81 ~~~~~~~~~~~ll~~pn~~~t~~~f~~~~~~~l~l~Gna~~~i~~~-~g~~~~l~~l~p~~v~v~~~~~~~~~~~~~~~y 159 (457) T protein:vir:62 81 RKEIDTPEWLDFPNAEPGGMGRIDILSQTVLSLLLQGNAFLAVRWA-GPNIAGLDVLDPTKIHVHMVMVDGLRRKVFEAY 159 (457) T ss_pred cccccchHHHHhccccCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCcceEEEEeccCCccceeEEEE Confidence 2356799999999999999999999999999998554 799999999999999987765433 334444 Q ss_pred EecCcc-eeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH-- Q lcl|Aclame:pro 148 TFDDPK-IEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD-- 224 (392) Q Consensus 148 ~~~~~~-~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~-- 224 (392) .+...+ ......+++++|||++++++++.++|+||+..++..|..+.++++++.++|+||++|+|+|++++..++++ T Consensus 160 ~~~~~g~~~~~~~~~~~eiih~r~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~ls~e~~~ 239 (457) T protein:vir:62 160 DIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGAHFFRNGAMPGAVVEVPGTMSEEGLA 239 (457) T ss_pred EEccCCceeEEEeeCccceEEecCCCCCCceecccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEcCCCCCHHHHH Confidence 444322 23345789999999999999988899999999999999999999999999999999999999998877664 Q ss_pred HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---ch-HHHHH Q lcl|Aclame:pro 225 KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---SS-IQQIS 300 (392) Q Consensus 225 ~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---~~-~~~~~ 300 (392) +.++.|.+.+.|..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||..++++ ++ +++.. T Consensus 240 ~~~~~~~~~~~G~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~eq~~~ 319 (457) T protein:vir:62 240 RAREAWRAANSGVDNAHRVALLTEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLISDATNSTSWGSGLAEQNI 319 (457) T ss_pred HHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCcccccchHHHHHH Confidence 345667778889999999999999999999999999999999999999999999999999999765543 33 45678 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc-- Q lcl|Aclame:pro 301 GMYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK-- 371 (392) Q Consensus 301 ~~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~-- 371 (392) +|+.+||.|+++.|+++|+.+|++ +++||.+.+++.|.+++++.+.+++++|++|+||+|++++..+++.. T Consensus 320 ~f~~~~l~P~~~~ie~~ln~~L~~~~~~~~~~i~fd~~~l~~~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~~g~~ 399 (457) T protein:vir:62 320 AFTMFSLRPWLERIEAGFNRLLFAETADRFRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLPDGLG 399 (457) T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCccccCceEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCc Confidence 999999999999999999999964 36899999999999999999999999999999999998854444321 Q ss_pred c-cccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 372 D-LPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 372 e-~~~~e~~~~~~~gd~~~p~p 392 (392) | ....-++.+.....+.+|.| T Consensus 400 D~~~~~~n~~~~~~~~~~~~~~ 421 (457) T protein:vir:62 400 EKYRVPLNLGEIGEEPEPEPAP 421 (457) T ss_pred ceeeeccccccccccccccccC Confidence 1 11111111111111111111 No 16 >protein:vir:81072 Length: 432 # NCBI annotation: p07 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285677;genbank:gi:148727185;genbank:GeneID:5247117 Probab=100.00 E-value=1.1e-81 Score=464.43 Aligned_cols=384 Identities=16% Similarity=0.218 Sum_probs=307.7 Q ss_pred CcchhhHhhcccccccc---cccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPE---VGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) =+||||++++....++. .....+..+.......+..+.+.+|..|+.++||++|+||+||++||++||+||+++|++ T Consensus 5 ~~mg~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~V~~~i~~Ia~~ia~lp~~~y~~ 84 (432) T protein:vir:81 5 KKLGLFGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAIAAMPLTMYMR 84 (432) T ss_pred hhcchhhhhhhhcccccccccccccccccCccchhhhcccccccCcccchHhhhccHHHHHHHHHHHHhhhhCceeeEEe Confidence 47999997654332221 111111111111112223344567889999999999999999999999999999999865 Q ss_pred cc------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEE Q lcl|Aclame:pro 78 KN------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYY 145 (392) Q Consensus 78 ~~------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~ 145 (392) .. ..++.+||++||+++||+.++.+++++||||+++.++ +|++++|||++|+.|++..+.++... | T Consensus 85 ~~~g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnayv~i~~~-~g~~~~L~~l~~~~v~v~~~~~g~~~-y 162 (432) T protein:vir:81 85 TPDGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDPKGNTA-Y 162 (432) T ss_pred cCCcceecccchHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCCceEEEECCCCcEE-E Confidence 32 2345799999999999999999999999999999986 59999999999999999988766544 4 Q ss_pred EEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHH Q lcl|Aclame:pro 146 NITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDK 225 (392) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~ 225 (392) .++.. .+..+.+++++|||+++.+.++ .+|+||+..++..|..+.+++++..++|+||++|+|++++++..++ + T Consensus 163 ~~~~~---~g~~~~~~~~~iih~r~~~~dg-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~--e 236 (432) T protein:vir:81 163 RYRRT---DGQMIDIPKQQIWKIMGYSLDG-ENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTD--D 236 (432) T ss_pred EEEec---CceEEEEccccEEEecCCCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCCCCH--H Confidence 44433 2456789999999999988777 6899999999999999999999999999999999999999886653 4 Q ss_pred HHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc----ch-HHHHH Q lcl|Aclame:pro 226 DKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ----SS-IQQIS 300 (392) Q Consensus 226 ~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~----~~-~~~~~ 300 (392) .++++.+.+.+..|+|++++|++|++|++++++++|+||+|++++++++||++|||||++||..+.++ ++ +++.. T Consensus 237 ~~~~~~~~~~~~~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~sn~eq~~~ 316 (432) T protein:vir:81 237 QYDSFAKKVSGSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQL 316 (432) T ss_pred HHHHHHHHHhhhhcCCCceecCCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCccccccchHHHHHH Confidence 45667788889999999999999999999999999999999999999999999999999999754432 23 45678 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccc Q lcl|Aclame:pro 301 GMYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDL 373 (392) Q Consensus 301 ~~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~ 373 (392) .|+++||.|+++.|+++|+.+|++ +++||...+++.|.+++++.++.++++|++|+||+|++++..+++.++. T Consensus 317 ~f~~~tl~P~~~~ie~~l~~kLl~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~t~NE~R~~~glpp~~g~~~ 396 (432) T protein:vir:81 317 GFLTMTLSPWLRRIEQSIALNLLSPAERRRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGGNAA 396 (432) T ss_pred HHHHHHHHHHHHHHHHHHHhhccCccccCceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCCcc Confidence 999999999999999999999964 4789999999999999999999999999999999999986555543332 Q ss_pred ccccCCC--CCC-CCCCCCCCC Q lcl|Aclame:pro 374 PAPENTN--KKT-TGQSNEPVP 392 (392) Q Consensus 374 ~~~e~~~--~~~-~gd~~~p~p 392 (392) ....+.+ |+. .+++..|.| T Consensus 397 ~~~~~~~~~pl~~~~~~~~~~~ 418 (432) T protein:vir:81 397 VLTVQSAMVPLDSIGLQASPEP 418 (432) T ss_pred eEeecCcccchhhhccCCCCCC Confidence 2212222 222 233333444 No 17 >protein:vir:93610 Length: 454 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:157 # MgeName: phi 4795 # Cross-refs: genbank:acc:YP_001449295;genbank:gi:157166043;interpro:IPR006427;interpro:IPR006944;uniprot:Q6H9U6;genbank:GeneID:5580432 Probab=100.00 E-value=7e-82 Score=465.52 Aligned_cols=387 Identities=15% Similarity=0.161 Sum_probs=303.9 Q ss_pred hhHhhcccccccccccccccccccchhh-hhhhh--cCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc-- Q lcl|Aclame:pro 5 ILNFINQTNDPPEVGSVQSYFPDGNDAQ-IMESL--LGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN-- 79 (392) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~-- 79 (392) +||+|++..........-.......... +.+.+ ...+|..|++++||++++||+||++||++||+||+++|++.. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~g 80 (454) T protein:vir:93 1 MWNLLRRTRKNQKSGRDVREAGWTSLFQAVAEPFAGAWQQGVKADPEAVLSFHAVFACISLISQDIAKMRLRLMQTDAQG 80 (454) T ss_pred CCCccccCcccccccccccchhhhhhhhhhhhhhcchhhcCcccChHHhhccHHHHHHHHHHHHhhccCceEEEEeccCC Confidence 8888877554333221111111111111 11112 224578899999999999999999999999999999997543 Q ss_pred ----------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEe Q lcl|Aclame:pro 80 ----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITF 149 (392) Q Consensus 80 ----------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~ 149 (392) ..++.+||++||+++||+.++.+++++||+|++++|+.+|++++|||++|+.|++..+.++...|.+... T Consensus 81 ~~~~~~~~~~~~L~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~y~~~~~ 160 (454) T protein:vir:93 81 IRRETRRGDIARLCRRPNAQQNRIQFFELWLNAKLRHGNTVVLKIRNARGQIKELRILDWNRVEPLVADDGEVFYRITPD 160 (454) T ss_pred ccchhhhHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCcceEEEEcCCCcEEEEEEec Confidence 2357899999999999999999999999999999999999999999999999999988766554433333 Q ss_pred cCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH--HHH Q lcl|Aclame:pro 150 DDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KDK 227 (392) Q Consensus 150 ~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~--~~~ 227 (392) .....+..+.+++++|||++.....+..+|+||+..++..+..+.+++++..++|+||++|+|++++++..++++ +.+ T Consensus 161 ~~~~~~~~~~~~~~eViH~k~~~~~~~~~G~sp~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~ 240 (454) T protein:vir:93 161 RNCGITEAVTVPAREVIHDRFNCFFHPLIGLPPVYAAGLAATQGHHIQENSTSFFRNGGRPSGVIEIPGSITEENAKKLK 240 (454) T ss_pred cccccceeEEecCcceEEeccCCCCCCceeccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEecCCCCCHHHHHHHH Confidence 333345577899999999997666666789999999999999999999999999999999999999998776654 334 Q ss_pred HHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-ch-HHHHHHHHHH Q lcl|Aclame:pro 228 ASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-SS-IQQISGMYAS 305 (392) Q Consensus 228 ~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-~~-~~~~~~~~~~ 305 (392) +.|.+.+.+ .|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||+.++.+ ++ +++.++|++. T Consensus 241 ~~~~~~~~g-~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~~ 319 (454) T protein:vir:93 241 SNWDSGYTG-ENAGKTAILSNGAKYNPTTFSPVDSQTVEQLKMTAEIVCSVFRVPAYKIGVGQPPSSDNVEALEQQYYSQ 319 (454) T ss_pred HHHHHHhcc-cccCCceeccCCceEEEcccChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCcchhHHHHHHHHHHH Confidence 556666655 78999999999999999999999999999999999999999999999999765443 34 4567899999 Q ss_pred HHHHHHHHHHHHHHHHhhh----hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccccccc-CCC Q lcl|Aclame:pro 306 ALNRYLRPAISELEYKLSD----HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPE-NTN 380 (392) Q Consensus 306 ~l~p~l~~i~~~l~~~l~~----~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~e-~~~ 380 (392) ||.|++..|+++|+.+|.+ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++..|...+. +.. T Consensus 320 ~l~P~~~~ie~~ln~~L~~~~~~~~~f~~~~ll~~D~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~ggD~~~~~~~~~ 399 (454) T protein:vir:93 320 CLQTLIESIELLLDEALETGENESTEFDVTTLLRMDSERRMKTLGDAVKNTLLTPNEARKRENLPPLAGGDALYLQQQNY 399 (454) T ss_pred HHHHHHHHHHHHHHHhhcCCCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeeeeccCcc Confidence 9999999999999999953 58899999999999999999999999999999999999866655433322111 110 Q ss_pred CC---------------CCCCCCCCCC Q lcl|Aclame:pro 381 KK---------------TTGQSNEPVP 392 (392) Q Consensus 381 ~~---------------~~gd~~~p~p 392 (392) ++ .+..+.+|.| T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (454) T protein:vir:93 400 SLEALSRRDAREDPFASSGKTASVPQA 426 (454) T ss_pred chHhhhccCcccCCCCCCccCCCCCCC Confidence 10 1111111211 No 18 >protein:vir:1380 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:314 # MgeName: phi3626 # Cross-refs: genbank:acc:NP_612832;genbank:gi:20065966;genbank:GeneID:935782 Probab=100.00 E-value=1.4e-81 Score=463.81 Aligned_cols=387 Identities=16% Similarity=0.125 Sum_probs=311.6 Q ss_pred chhhHhhccccc-cccc-cccc-ccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc Q lcl|Aclame:pro 3 LPILNFINQTND-PPEV-GSVQ-SYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN 79 (392) Q Consensus 3 Mg~~~~~~~~~~-~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~ 79 (392) ||||+.++++.. .+.. +... ..........+|..+....+..|+.+.||++++|++||++||++||++|++++++.. T Consensus 1 MG~f~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~al~~~~v~~ci~~ia~~iA~lp~~~~~~~~ 80 (422) T protein:vir:13 1 MGFLRGLFNKKNNNDEKRSNYDEDIGIDISDSNFWEKFGIKLNFSVRGKRALKENTVYVCTKIRAESIGKLSLKIYKDKE 80 (422) T ss_pred CchhhhhhhccCCccchhhhhhhccccccCcchhhhhccccCCcccchhhhhccHHHHHHHHHHHHhhhhCceEEEecCc Confidence 999986554433 2221 1111 111223344566666666677899999999999999999999999999999987654 Q ss_pred c--------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccc-----eEEEE Q lcl|Aclame:pro 80 Q--------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN-----GMYYN 146 (392) Q Consensus 80 ~--------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~-----~~~~~ 146 (392) . .++.+||++||+++||+.++.+++++||+|+++.|+.+|++++|+|++|+.|++..++++. .++|. T Consensus 81 ~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~v~~~~~~~~~~~~~~~~~y~ 160 (422) T protein:vir:13 81 EYKEHELYYLLRYKPNPLMSSINFWKCLETQRTLKGNAYAYIERDRKGKIIGLYPINSDNVTKIIDDDNFLSSLSKVWYV 160 (422) T ss_pred ccccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCcceEEEEcCCcceeccceEEEE Confidence 2 3567999999999999999999999999999999999999999999999999999887763 33343 Q ss_pred EEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch--H Q lcl|Aclame:pro 147 ITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS--D 224 (392) Q Consensus 147 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~--~ 224 (392) +.. ..+....+++++|||++.+...+..+|+||+..++.++..+.++++++.++|+||++|+|++++++..+++ + T Consensus 161 ~~~---~~g~~~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~ 237 (422) T protein:vir:13 161 VTD---KNGKEHKLLPDEMLHFIGDITLDGLIGIKPLDYLRCTIENGRATQEFINKFFKNGLSIKGIVQYVGDLDEKAKK 237 (422) T ss_pred EEe---CCCeEEEEcccceEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHH Confidence 333 24566789999999999876666688999999999999999999999999999999999999999876655 3 Q ss_pred HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc--cchHHHHHHH Q lcl|Aclame:pro 225 KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ--QSSIQQISGM 302 (392) Q Consensus 225 ~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~--~~~~~~~~~~ 302 (392) +.++.+.+.+.+..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||+.+++ ++.+++..+| T Consensus 238 ~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVpp~~lg~~~~~~~sn~e~~~~~f 317 (422) T protein:vir:13 238 IFKKEFESMSNGLENAHSISLLPFGYQFQPISLSMADAQFLENSKLTKRELAATFGMKSYHLNDLERATFNNLTEQQKDF 317 (422) T ss_pred HHHHHHHHHhcCccccCCceecCCCceeeeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHH Confidence 44667778888889999999999999999999999999999999999999999999999999975443 3445678999 Q ss_pred HHHHHHHHHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccc Q lcl|Aclame:pro 303 YASALNRYLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLP 374 (392) Q Consensus 303 ~~~~l~p~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~ 374 (392) +++||.|++++|+++|+.+|++ .++||...+++.|.+++++.+..++++|++|+||+|++++..+++..|.. T Consensus 318 ~~~~l~P~~~~ie~~l~~~Ll~~~~~~~g~~i~fd~~~l~r~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD~~ 397 (422) T protein:vir:13 318 YVTTLQSSLTVYEQEIQDKLFSQYETLQDVKAEFNVDTILRSDIKTRYEAYRIGIQGGFIEANEARRRENLPPVEGGDRL 397 (422) T ss_pred HHHHHHHHHHHHHHHHHHhhCChhhhcCCceEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCee Confidence 9999999999999999999864 36788899999999999999999999999999999999855554333321 Q ss_pred -cccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 375 -APENTNKKTTGQSNEPVP 392 (392) Q Consensus 375 -~~e~~~~~~~gd~~~p~p 392 (392) ..-++.|+...+++.+.. T Consensus 398 ~~~~n~~~l~~~~~~~~~~ 416 (422) T protein:vir:13 398 LVNGNMIPIEMAGEQYKKG 416 (422) T ss_pred eeccCccchhhcccccccC Confidence 112222222111111111 No 19 >protein:vir:97060 Length: 432 # NCBI annotation: putative head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453563;genbank:gi:84662598;genbank:GeneID:5142475 Probab=100.00 E-value=1.4e-81 Score=463.79 Aligned_cols=384 Identities=17% Similarity=0.208 Sum_probs=308.0 Q ss_pred CcchhhHhhcccccccccccc---cccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSV---QSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) =.||||++++....++..... ....+.......+....+.+|..|+.++||++++||+||++||++||+||+++|++ T Consensus 5 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~a~~~~aV~~~v~~Ia~~ia~lp~~~y~~ 84 (432) T protein:vir:97 5 KKLGLLGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAVAAMPLMMYMR 84 (432) T ss_pred ccCchhhhhHhhcCCccccccccccccccCchhhhhhcccccccCcccchHhhhcchHHHHHHHHHHHhhccCceEEEEe Confidence 469999887766544332211 11111111111122334567889999999999999999999999999999999975 Q ss_pred cc------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEE Q lcl|Aclame:pro 78 KN------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYY 145 (392) Q Consensus 78 ~~------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~ 145 (392) .. ..++.+||++||+++||+.++.+++++||||++++++ +|++.+||||+|+.|++..+.++... | T Consensus 85 ~~~g~~~~~~~pl~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~-~g~~~~L~~l~p~~v~v~~~~~g~~~-y 162 (432) T protein:vir:97 85 TPDGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDTKGNTA-Y 162 (432) T ss_pred cCCCcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCcceEEEEcCCCcEE-E Confidence 42 2346799999999999999999999999999999997 59999999999999999988776544 4 Q ss_pred EEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHH Q lcl|Aclame:pro 146 NITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDK 225 (392) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~ 225 (392) .++.. .+..+.+++++|||+++++.++ .+|+||+..++..+..+.+++++..++|+||++|+|++++++..++ + T Consensus 163 ~~~~~---~g~~~~~~~~~iih~r~~~~dg-~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~gil~~~~~l~~--e 236 (432) T protein:vir:97 163 RYRRT---DGQMIDIPRQQIWKIMGYSLDG-ENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTD--D 236 (432) T ss_pred EEEec---CceEEEEccccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceeEecCCCCCH--H Confidence 44432 2456789999999999988776 6899999999999999999999999999999999999999987653 3 Q ss_pred HHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc----ch-HHHHH Q lcl|Aclame:pro 226 DKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ----SS-IQQIS 300 (392) Q Consensus 226 ~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~----~~-~~~~~ 300 (392) .++++.+.+.+..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||..+.++ ++ +++.. T Consensus 237 ~~~~~~~~~~~~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~~s~~e~~~~ 316 (432) T protein:vir:97 237 QYDSFSKKVSGSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQL 316 (432) T ss_pred HHHHHHHHHhhhhcCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCcCCcccccchhHHHHHH Confidence 45667788889999999999999999999999999999999999999999999999999999754432 33 45678 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccc Q lcl|Aclame:pro 301 GMYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDL 373 (392) Q Consensus 301 ~~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~ 373 (392) +|+++||.|+++.|+++|+.+|++ +++||...+++.|.+++++.+.+++++|++|+||+|++++..+.+.++. T Consensus 317 ~f~~~tl~P~~~~ie~~ln~kLl~~~e~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~glpp~~g~~~ 396 (432) T protein:vir:97 317 GFLTMTLSPWLRRIEQSIALNLLTPAERRRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGGNAA 396 (432) T ss_pred HHHHHHHHHHHHHHHHHHhhhccCccccCceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCCcc Confidence 999999999999999999999864 3789999999999999999999999999999999999985555543332 Q ss_pred cccc--CCCCCCC-CCCCCCCC Q lcl|Aclame:pro 374 PAPE--NTNKKTT-GQSNEPVP 392 (392) Q Consensus 374 ~~~e--~~~~~~~-gd~~~p~p 392 (392) .... ++.|+.. +.+..|.| T Consensus 397 ~~~~~~~~~pl~~~~~~~~~~~ 418 (432) T protein:vir:97 397 VLTVQSAMVPLDSIGLQASPEP 418 (432) T ss_pred eEeecccccchhhhcccCCCCC Confidence 2211 2222221 22333334 No 20 >protein:vir:107605 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1491 # MgeName: Gamma # Cross-refs: genbank:acc:YP_338186;genbank:gi:77020175;genbank:GeneID:3703736 Probab=100.00 E-value=2.2e-81 Score=462.83 Aligned_cols=386 Identities=17% Similarity=0.145 Sum_probs=307.5 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhh-cCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESL-LGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~- 80 (392) ||||+++++.....++..............+..++ ....+..|+.++|+++++||+||++||++||+||++++++... T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 80 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhCCCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 99999875543322222222222222333344444 2345778999999999999999999999999999999876422 Q ss_pred -----------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccc-----eEE Q lcl|Aclame:pro 81 -----------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN-----GMY 144 (392) Q Consensus 81 -----------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~-----~~~ 144 (392) .++.+||++||+++||+.++.+++++||+|++++|+.+|++++|||++|+.|++..++.+. ..+ T Consensus 81 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~~ 160 (432) T protein:vir:10 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEE Confidence 2446999999999999999999999999999999999999999999999999998876432 222 Q ss_pred EEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH Q lcl|Aclame:pro 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~ 224 (392) |.+ . .++..+.+++++|||+++..+.+..+|+||+..++.++..+.+++++..++|+||++|+|++++++..++++ T Consensus 161 y~~--~--~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~ 236 (432) T protein:vir:10 161 YVV--N--TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 236 (432) T ss_pred EEE--e--cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHH Confidence 222 2 345577899999999998766666789999999999999999999999999999999999999998766653 Q ss_pred --HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc--cchHHHHH Q lcl|Aclame:pro 225 --KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ--QSSIQQIS 300 (392) Q Consensus 225 --~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~--~~~~~~~~ 300 (392) +.++.+.+.+.+..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||..+++ ++.+++.. T Consensus 237 ~~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~ 316 (432) T protein:vir:10 237 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 316 (432) T ss_pred HHHHHHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHH Confidence 33556777788889999999999999999999999999999999999999999999999999965443 34456788 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc Q lcl|Aclame:pro 301 GMYASALNRYLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD 372 (392) Q Consensus 301 ~~~~~~l~p~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e 372 (392) +|+++||+|+++.|+++|+.+|++ +++||...+++.|.+++++.+..++++|++|+||+|++++..+++..| T Consensus 317 ~~~~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~ggD 396 (432) T protein:vir:10 317 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD 396 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Confidence 999999999999999999999863 368899999999999999999999999999999999998655544333 Q ss_pred cccc-cCCC--------CCCCCCCCCCCC Q lcl|Aclame:pro 373 LPAP-ENTN--------KKTTGQSNEPVP 392 (392) Q Consensus 373 ~~~~-e~~~--------~~~~gd~~~p~p 392 (392) .... -+.- ..++|+++.-.. T Consensus 397 ~~~~~~n~~~~~~~~~~~~k~~~~~~~~~ 425 (432) T protein:vir:10 397 RLLVNGNMLPIDMAGQAYLKGGDTNGEVS 425 (432) T ss_pred eEeecccccchhhccccccCCCCCCCCCC Confidence 2111 1111 122333322222 No 21 >protein:vir:105002 Length: 432 # NCBI annotation: putative phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1490 # MgeName: W Beta # Cross-refs: genbank:acc:YP_459967;genbank:gi:85701382;genbank:GeneID:3882143 Probab=100.00 E-value=2.2e-81 Score=462.83 Aligned_cols=386 Identities=17% Similarity=0.145 Sum_probs=307.5 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhh-cCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESL-LGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~- 80 (392) ||||+++++.....++..............+..++ ....+..|+.++|+++++||+||++||++||+||++++++... T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 80 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhCCCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 99999875543322222222222222333344444 2345778999999999999999999999999999999876422 Q ss_pred -----------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccc-----eEE Q lcl|Aclame:pro 81 -----------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN-----GMY 144 (392) Q Consensus 81 -----------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~-----~~~ 144 (392) .++.+||++||+++||+.++.+++++||+|++++|+.+|++++|||++|+.|++..++.+. ..+ T Consensus 81 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~~ 160 (432) T protein:vir:10 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEE Confidence 2446999999999999999999999999999999999999999999999999998876432 222 Q ss_pred EEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH Q lcl|Aclame:pro 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~ 224 (392) |.+ . .++..+.+++++|||+++..+.+..+|+||+..++.++..+.+++++..++|+||++|+|++++++..++++ T Consensus 161 y~~--~--~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~ 236 (432) T protein:vir:10 161 YVV--N--TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 236 (432) T ss_pred EEE--e--cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHH Confidence 222 2 345577899999999998766666789999999999999999999999999999999999999998766653 Q ss_pred --HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc--cchHHHHH Q lcl|Aclame:pro 225 --KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ--QSSIQQIS 300 (392) Q Consensus 225 --~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~--~~~~~~~~ 300 (392) +.++.+.+.+.+..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||..+++ ++.+++.. T Consensus 237 ~~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~ 316 (432) T protein:vir:10 237 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 316 (432) T ss_pred HHHHHHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHH Confidence 33556777788889999999999999999999999999999999999999999999999999965443 34456788 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc Q lcl|Aclame:pro 301 GMYASALNRYLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD 372 (392) Q Consensus 301 ~~~~~~l~p~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e 372 (392) +|+++||+|+++.|+++|+.+|++ +++||...+++.|.+++++.+..++++|++|+||+|++++..+++..| T Consensus 317 ~~~~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~ggD 396 (432) T protein:vir:10 317 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD 396 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Confidence 999999999999999999999863 368899999999999999999999999999999999998655544333 Q ss_pred cccc-cCCC--------CCCCCCCCCCCC Q lcl|Aclame:pro 373 LPAP-ENTN--------KKTTGQSNEPVP 392 (392) Q Consensus 373 ~~~~-e~~~--------~~~~gd~~~p~p 392 (392) .... -+.- ..++|+++.-.. T Consensus 397 ~~~~~~n~~~~~~~~~~~~k~~~~~~~~~ 425 (432) T protein:vir:10 397 RLLVNGNMLPIDMAGQAYLKGGDTNGEVS 425 (432) T ss_pred eEeecccccchhhccccccCCCCCCCCCC Confidence 2111 1111 122333322222 No 22 >protein:vir:102855 Length: 432 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1492 # MgeName: Cherry # Cross-refs: genbank:acc:YP_338135;genbank:gi:77020228;genbank:GeneID:3703764 Probab=100.00 E-value=2.2e-81 Score=462.83 Aligned_cols=386 Identities=17% Similarity=0.145 Sum_probs=307.5 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhh-cCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESL-LGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~- 80 (392) ||||+++++.....++..............+..++ ....+..|+.++|+++++||+||++||++||+||++++++... T Consensus 1 M~~~~r~~~~~~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 80 (432) T protein:vir:10 1 MKIVDSVKKFFNFEKRQTSQVIELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 80 (432) T ss_pred CChHHHHHHhcCccccCcccccccCCchHHHHHHhCCCcCccccchhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 99999875543322222222222222333344444 2345778999999999999999999999999999999876422 Q ss_pred -----------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccc-----eEE Q lcl|Aclame:pro 81 -----------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN-----GMY 144 (392) Q Consensus 81 -----------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~-----~~~ 144 (392) .++.+||++||+++||+.++.+++++||+|++++|+.+|++++|||++|+.|++..++.+. ..+ T Consensus 81 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~d~~~~~~~~~~~~ 160 (432) T protein:vir:10 81 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 160 (432) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEE Confidence 2446999999999999999999999999999999999999999999999999998876432 222 Q ss_pred EEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH Q lcl|Aclame:pro 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~ 224 (392) |.+ . .++..+.+++++|||+++..+.+..+|+||+..++.++..+.+++++..++|+||++|+|++++++..++++ T Consensus 161 y~~--~--~~g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~ 236 (432) T protein:vir:10 161 YVV--N--TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDA 236 (432) T ss_pred EEE--e--cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHH Confidence 222 2 345577899999999998766666789999999999999999999999999999999999999998766653 Q ss_pred --HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc--cchHHHHH Q lcl|Aclame:pro 225 --KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ--QSSIQQIS 300 (392) Q Consensus 225 --~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~--~~~~~~~~ 300 (392) +.++.+.+.+.+..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||..+++ ++.+++.. T Consensus 237 ~~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~s~~e~~~~ 316 (432) T protein:vir:10 237 KKVFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQ 316 (432) T ss_pred HHHHHHHHHHHhcccccCCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHH Confidence 33556777788889999999999999999999999999999999999999999999999999965443 34456788 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc Q lcl|Aclame:pro 301 GMYASALNRYLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD 372 (392) Q Consensus 301 ~~~~~~l~p~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e 372 (392) +|+++||+|+++.|+++|+.+|++ +++||...+++.|.+++++.+..++++|++|+||+|++++..+++..| T Consensus 317 ~~~~~~l~P~~~~ie~~ln~kLl~~~~~~~g~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~ggD 396 (432) T protein:vir:10 317 QFYTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGD 396 (432) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCC Confidence 999999999999999999999863 368899999999999999999999999999999999998655544333 Q ss_pred cccc-cCCC--------CCCCCCCCCCCC Q lcl|Aclame:pro 373 LPAP-ENTN--------KKTTGQSNEPVP 392 (392) Q Consensus 373 ~~~~-e~~~--------~~~~gd~~~p~p 392 (392) .... -+.- ..++|+++.-.. T Consensus 397 ~~~~~~n~~~~~~~~~~~~k~~~~~~~~~ 425 (432) T protein:vir:10 397 RLLVNGNMLPIDMAGQAYLKGGDTNGEVS 425 (432) T ss_pred eEeecccccchhhccccccCCCCCCCCCC Confidence 2111 1111 122333322222 No 23 >protein:vir:10362 Length: 432 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858954;genbank:gi:32128419;genbank:GeneID:2648396 Probab=100.00 E-value=7.4e-81 Score=459.88 Aligned_cols=384 Identities=16% Similarity=0.216 Sum_probs=307.3 Q ss_pred CcchhhHhhcccccccccccc---cccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSV---QSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) =+||+|++++....++..... .+..+.......+....+.+|..|+.++||++++||+||++||++||+||+++|++ T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~v~~~~al~~~~V~~~i~~Ia~~ia~lp~~~y~~ 84 (432) T protein:vir:10 5 KKLGLLGQLKAMFVPPDPVDIGGGQTFTPVNATARDLGIIISDTGAAVNADAIMRLDAVAACVKLVSQAIAAMPLTMYMR 84 (432) T ss_pred cccchhhhhHhhcCCccccccccccccccCcchhhhhcccccccCcccchhhhhcchHHHHHHHHHHHhhhhCceeEEEe Confidence 468999877665544332211 11111111111222334567889999999999999999999999999999999875 Q ss_pred cc------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEE Q lcl|Aclame:pro 78 KN------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYY 145 (392) Q Consensus 78 ~~------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~ 145 (392) .. ..++.+||++||+++||+.++.+++++||||+++.|+ +|++.+|||++|+.|++..+.++...| T Consensus 85 ~~~g~~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gnay~~~~~~-~g~~~~L~~l~~~~v~v~~~~~g~~~y- 162 (432) T protein:vir:10 85 TPDGRKEAVNHPLYTLLLDGPNSTQTAFDFWQVVVTRLLLDGTAYVRKVVT-DGRIESLQYLANDRLTITTDTKGNTAY- 162 (432) T ss_pred cCCCcccccccHHHHHHHhcccccCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCCceEEEEcCCCcEEE- Confidence 42 2345799999999999999999999999999999986 699999999999999999887765444 Q ss_pred EEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHH Q lcl|Aclame:pro 146 NITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDK 225 (392) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~ 225 (392) .++.. .+..+.+++++|||+++++.++ .+|+||+..++..+..+.+++++..++|+||++|+|++++++..++ + T Consensus 163 ~~~~~---~g~~~~~~~~~iih~~~~~~dg-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~--e 236 (432) T protein:vir:10 163 RYRRT---DGQMIDIPKQQIWKIMGYSLDG-ENGLSAIRYGAQIFGTAIAAEAQAARAFRNGQLQSVYYQIDRFLTD--D 236 (432) T ss_pred EEEec---CceEEEEcCccEEEecCCCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEecCCCCCH--H Confidence 44332 2456789999999999987776 5799999999999999999999999999999999999999887653 3 Q ss_pred HHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc----ch-HHHHH Q lcl|Aclame:pro 226 DKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ----SS-IQQIS 300 (392) Q Consensus 226 ~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~----~~-~~~~~ 300 (392) .++++.+.+.+..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||..+.++ ++ +++.. T Consensus 237 ~~~~~~~~~~~~~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~~~~~t~~~~sn~e~~~~ 316 (432) T protein:vir:10 237 QYDSFAKKVSGSVEAGRAPLLEGGMDVKSLGLNPVDAQLLQSRQYSVESICRFFGVPPSMIGHSSAGTTSWGSGIESQQL 316 (432) T ss_pred HHHHHHHHHhhhhhCCCceecCCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCcccccchHHHHHH Confidence 45677788889999999999999999999999999999999999999999999999999999754432 33 45678 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccc Q lcl|Aclame:pro 301 GMYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDL 373 (392) Q Consensus 301 ~~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~ 373 (392) +|+++||.|+++.|+++|+.+|++ +++||...+++.|.+++++.+.+++++|++|+||+|++++..+++.++. T Consensus 317 ~f~~~tl~P~~~~ie~~ln~kL~~~~~~~~~~~~fd~~~ll~~d~~~r~~~~~~~~~~G~~T~NE~R~~~glppi~g~~~ 396 (432) T protein:vir:10 317 GFLSMTLSPWLRRIEQSIALNLLSPAERRRYFADFDTSALLRADSAARSSYYSQLVNNGLMTRDEAREIEGLPKLGGNAA 396 (432) T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCccccCceEEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCCcc Confidence 999999999999999999999964 3789999999999999999999999999999999999985555543322 Q ss_pred ccccCCC--CCCC-CCCCCCCC Q lcl|Aclame:pro 374 PAPENTN--KKTT-GQSNEPVP 392 (392) Q Consensus 374 ~~~e~~~--~~~~-gd~~~p~p 392 (392) ....+.+ |+.. +++..|.| T Consensus 397 ~~~~~~~~~pl~~~~~~~~~~~ 418 (432) T protein:vir:10 397 VLTVQSAMVPLDSIGLQASPEP 418 (432) T ss_pred eEeecCcccchhhhcccCCCCC Confidence 1111222 2221 23333333 No 24 >protein:vir:81152 Length: 411 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285809;genbank:gi:148747730;genbank:GeneID:5247195 Probab=100.00 E-value=9e-81 Score=459.41 Aligned_cols=375 Identities=16% Similarity=0.129 Sum_probs=303.8 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ-- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~-- 80 (392) ||||+++++...+...+ ....+..+..+ .+ +..++.+.|+++++||+||++||++||++|++++++..+ T Consensus 1 MG~~~~~~~~~~~~~~~------~~~~~~~~~~~-~g--~~~~~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~~~ 71 (411) T protein:vir:81 1 MGWWSRLTRFFRPRNET------VDMTNPLLLQW-LG--VDPDTPRNQLSEATYFACLKILSESLGKLPLKMYQKTERGI 71 (411) T ss_pred CchHHHHHhhccCcccc------cccchHHHHHH-hc--CcccChhhhhccHHHHHHHHHHHHhHhhCceeEEEecCCce Confidence 99999887655433211 11222223333 22 345789999999999999999999999999999975432 Q ss_pred ----------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccce---EEEEE Q lcl|Aclame:pro 81 ----------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENG---MYYNI 147 (392) Q Consensus 81 ----------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~---~~~~~ 147 (392) .++.+||++||+++||+.++.+++++||+|++++|+ .|++.+|||++|+.|++..++++.. ....+ T Consensus 72 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~i~r~-~g~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~ 150 (411) T protein:vir:81 72 VKSDREELYNLLKLRPNPYMTSSVFWSTVEMNRNHYGNAYVWCQYS-GPQLQALWILPSQYVTIVVDDRGLLGEKNAIWY 150 (411) T ss_pred eeecccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCceEEEEEECCceEEEEEcCcccccccceEEE Confidence 245689999999999999999999999999999998 6999999999999999998765422 11223 Q ss_pred EecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH--H Q lcl|Aclame:pro 148 TFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--K 225 (392) Q Consensus 148 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~--~ 225 (392) .+.....+..+.+++++|||++++...+..+|+||+..++.++..+.+++++..++|+||++|+|++++++..++++ + T Consensus 151 ~~~~~~~g~~~~~~~~eiih~k~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~ 230 (411) T protein:vir:81 151 RYNDPYDGKMYVFRNDEILHFKTSVTFDGITGLSVRDVLKHTVDGALESQKFMNNLYKTGLTGKAVLEYTGDLNQEARDR 230 (411) T ss_pred EEEecCCceEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCHHHHHH Confidence 33333456678899999999997655566789999999999999999999999999999999999999998776663 4 Q ss_pred HHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-c-hHHHHHHHH Q lcl|Aclame:pro 226 DKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-S-SIQQISGMY 303 (392) Q Consensus 226 ~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-~-~~~~~~~~~ 303 (392) .++.|.+.+.+.+|+|++++|++|++|++++.+++|+||+|++++++++||++|||||++||+.++++ + .+++..+|+ T Consensus 231 ~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~n~e~~~~~f~ 310 (411) T protein:vir:81 231 LVKGFEQFANGSKNAGKIIPVPLGMKLVPLDIKLTDSQFFELKKYTALQIAAAFGIKPNQINDYEKSSYASAEAQNLAFY 310 (411) T ss_pred HHHHHHHHhcCccccCCceecCCCceEEEccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCchhHHHHHHHHH Confidence 46677888889899999999999999999999999999999999999999999999999999765433 3 346778999 Q ss_pred HHHHHHHHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccccc Q lcl|Aclame:pro 304 ASALNRYLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPA 375 (392) Q Consensus 304 ~~~l~p~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~ 375 (392) ++||.|++.+|+++|+.+|++ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+.+..|... T Consensus 311 ~~~l~P~~~~ie~~l~~~ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~g~~t~NE~R~~~gl~p~~ggD~~~ 390 (411) T protein:vir:81 311 VDTLLYVLKQYEEEITYKILSNDLISQGHYFKFNVNVILRADIKTQMDSLSTAVQNGIMTPNEARDYLDMPADDYGNNLM 390 (411) T ss_pred HHHHHHHHHHHHHHHHhhcCChhhcCCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeee Confidence 999999999999999999863 368999999999999999999999999999999999988544443223221 Q ss_pred c-cCCCC--------CCCCCC Q lcl|Aclame:pro 376 P-ENTNK--------KTTGQS 387 (392) Q Consensus 376 ~-e~~~~--------~~~gd~ 387 (392) . -+.-| ..|||. T Consensus 391 ~~~n~~pl~~~~~~~~kgGd~ 411 (411) T protein:vir:81 391 ANGNYIPLSMLGANYGKGGDS 411 (411) T ss_pred eccCccchhhhhhhhccCCCC Confidence 1 12212 235555 No 25 >protein:vir:100150 Length: 437 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945033;genbank:gi:38707893;genbank:GeneID:2744197 Probab=100.00 E-value=8.5e-81 Score=459.56 Aligned_cols=384 Identities=16% Similarity=0.185 Sum_probs=306.5 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhc---CCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLL---GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) |+=++=+++.+...... .+...++. ..+..+|..+. ...+..|+.++|+++|+||+||++||++||+||++++++ T Consensus 1 ~~~~~~~~~~~~~~~~~-~~~g~~~s-~~~~~~~~~~~~~~~~~g~~v~~~~al~~~~v~~ci~~Ia~~ia~lp~~~~~~ 78 (437) T protein:vir:10 1 MKQGKQRALGRIKSSFL-KWLGVPIS-LTDGSFWSAWGGMGSSSGETVTADSALQLSAVWSCVRLIAETIATLPLNLYQT 78 (437) T ss_pred CCcchhhhhhhhHHhhh-hhcCCccc-CCchhHHHhhcccccCCCceechHhhhccHHHHHHHHHHHHHHhhCceeEEEE Confidence 66555555554433222 12222221 22334444443 346778999999999999999999999999999999875 Q ss_pred cc-------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEE Q lcl|Aclame:pro 78 KN-------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMY 144 (392) Q Consensus 78 ~~-------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~ 144 (392) .. ..++.+||++||+++||+.++.+++++||+|++++|+ .|++++|||++|+.|++..+.++... T Consensus 79 ~~~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~-~g~~~~L~~l~p~~v~i~~~~~g~~~- 156 (437) T protein:vir:10 79 KPDGTRVLAKQHRLYTVIHSQPNAENTAAEFWEVIVASMLLWGNGYARKLRS-AGVLIGLELMLPQRTTVKRLTSGALQ- 156 (437) T ss_pred cCCCceeeccccHHHHHhhccCCcCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEcCcceEEEECCCCeEE- Confidence 42 2245789999999999999999999999999999998 59999999999999999887665444 Q ss_pred EEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH Q lcl|Aclame:pro 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~ 224 (392) |.++.. .+....+++++|||+++++.++ .+|+||+..++.++..+.+++++..++|+||++|+|+|++++..++++ T Consensus 157 y~~~~~---~g~~~~~~~~dIih~r~~~~d~-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~ 232 (437) T protein:vir:10 157 YTYRNV---DGTVSTLAEDDVFHVRGFSLDG-LMGLTPIQYAREVLGNSTAANKTSASVFRNGLRPSGVLSTDQILQKEK 232 (437) T ss_pred EEEEec---CceEEEEccccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHH Confidence 333332 2456789999999999988766 679999999999999999999999999999999999999998766654 Q ss_pred --HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---ch-HHH Q lcl|Aclame:pro 225 --KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---SS-IQQ 298 (392) Q Consensus 225 --~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---~~-~~~ 298 (392) +.++.|.+.+.|..|+|+++||++|++|++++++++|+||+|++++++++||++|||||++||+.++++ ++ +++ T Consensus 233 ~~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~e~~ 312 (437) T protein:vir:10 233 RAEIRTDLAEQFGGAMQAGKTMVLEAGMKYQAITMNPGDVQLLETRAFNIEEICRWYRVPPFMVGHSEKSTSWGTGIEQQ 312 (437) T ss_pred HHHHHHHHHHHhcCccccCcceeccCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccchHHHH Confidence 445677788899999999999999999999999999999999999999999999999999999765433 33 457 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc Q lcl|Aclame:pro 299 ISGMYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK 371 (392) Q Consensus 299 ~~~~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~ 371 (392) ..+|++.||.|++..|+++|+++|++ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++.+ T Consensus 313 ~~~f~~~tl~P~~~~ie~~l~~kll~~~e~~~~~~~fd~~~ll~~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~gg 392 (437) T protein:vir:10 313 TLGFLTFTLRPWLTRIEQAARRSLLRPGERDQFYAEFSVEGLLRADSAGRAAFYSTMTQNGLMTRDECRAKENLPPMGGN 392 (437) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCccccCceEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCC Confidence 78899999999999999999999964 37899999999999999999999999999999999999866666544 Q ss_pred ccccc--cCCCCCCCCCCCCCCC Q lcl|Aclame:pro 372 DLPAP--ENTNKKTTGQSNEPVP 392 (392) Q Consensus 372 e~~~~--e~~~~~~~gd~~~p~p 392 (392) +.... -++.|+...+++.+.. T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~ 415 (437) T protein:vir:10 393 AAVLTVQSALLPIDKLGEHTTAT 415 (437) T ss_pred cceEeecCcccchhhccCcCCCc Confidence 32211 1222222222222211 No 26 >protein:vir:1326 Length: 457 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:28 # MgeName: phi-C31 # Cross-refs: genbank:acc:NP_047925;swissprot:trembl:q9zxb2;genbank:gi:9631143;uniprot:Q9ZXB2;genbank:GeneID:2715872 Probab=100.00 E-value=2.1e-80 Score=457.40 Aligned_cols=389 Identities=14% Similarity=0.159 Sum_probs=305.8 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhh-cCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESL-LGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~- 80 (392) ||||+.++++..++.............+..++.++ ...+|+.|+.++||++++||+||++||++||+||+++|++... T Consensus 1 Mg~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~~~al~~~~V~~~v~~Ia~~iA~lp~~~~~~~~~~ 80 (457) T protein:vir:13 1 MGFWSALFGRGHSPALDGIEARAWEPYDPSIYNLGAVAASGETVTPHDALQVSAVFASVRLLSETIATLPLSTYSKRGGS 80 (457) T ss_pred CchhhhhhcccccccccccccccccccchHHHhhcccccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 99999887766554333222211111222233222 3456789999999999999999999999999999999986432 Q ss_pred ----------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccc---eEEEEE Q lcl|Aclame:pro 81 ----------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN---GMYYNI 147 (392) Q Consensus 81 ----------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~---~~~~~~ 147 (392) .++..||.+||+++||+.++.+++++||+|++|.++ .|+|++||||+|+.|++..+..++ ..++.| T Consensus 81 ~~~~~~~~l~~~ln~~~n~~t~~~f~~~~~~~lll~Gna~~~i~~~-~g~~~~l~~l~p~~v~v~~~~~~~~~~~~~~~y 159 (457) T protein:vir:13 81 RKEIVTPEWLDYPNAEPGGMGRIDILSQTVLSLLLQGNAFLAVRWQ-GPNIVGLDVLDPTKIHVHMVMVDGLRRKVFEAY 159 (457) T ss_pred ccccccchHHHhccccCCCCCHHHHHHHHHHHHhhcCCeEEEEEec-CCcEEEEEEEccCceEEEEecCCCccceeEEEE Confidence 123444457999999999999999999999999765 699999999999999998765544 344444 Q ss_pred EecCcc-eeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH-- Q lcl|Aclame:pro 148 TFDDPK-IEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD-- 224 (392) Q Consensus 148 ~~~~~~-~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~-- 224 (392) .+.... ......+++++|||++++++++.++|+||+..++..|..+.+++++..++|+||++|+|+|++++..++++ T Consensus 160 ~~~~~~~~~~~~~~~~~diih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~ls~e~~~ 239 (457) T protein:vir:13 160 DIDADGNEVLLGWFTPRDVLHIPGMMLPGDFVGCSPISYARESIGLALAAQKYGSKFFANGAMPGAVVEVPGTMSEEGLA 239 (457) T ss_pred EEecCCceeeEEeeCccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcCCCCCHHHHH Confidence 444332 22345689999999999999998899999999999999999999999999999999999999998776663 Q ss_pred HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---ch-HHHHH Q lcl|Aclame:pro 225 KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---SS-IQQIS 300 (392) Q Consensus 225 ~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---~~-~~~~~ 300 (392) +.++.|.+.+.|..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||..++++ ++ +++.. T Consensus 240 ~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~eq~~~ 319 (457) T protein:vir:13 240 RAREAWRAANSGVDNAHRVALLTEGAKFSKVAMSPDEAQFLQTRQFQVPEIARIFGVPPHLISDATNSTSWGSGLAEQNI 319 (457) T ss_pred HHHHHHHHHhcCccccCcceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCcccccchHHHHHH Confidence 446677888889999999999999999999999999999999999999999999999999999765543 33 45678 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc-- Q lcl|Aclame:pro 301 GMYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK-- 371 (392) Q Consensus 301 ~~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~-- 371 (392) +|+.+||.|+++.|+++|+.+|++ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++.. T Consensus 320 ~f~~~tl~P~~~~ie~~ln~~L~~~~~~~~~~i~fd~~~l~~~D~~~r~~~~~~~~~~G~~T~NE~R~~~gl~Pi~~g~~ 399 (457) T protein:vir:13 320 AFTMFSLRPWLERIEAGFNRLLFAETADRFRFVKFNLDEIKRGAPKERMELWSLGLQNGIYSIDEVRAAEDMTPLPDGLG 399 (457) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCccccCceeEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCcc Confidence 999999999999999999999964 37899999999999999999999999999999999998855544321 Q ss_pred ccc-cccCCCCCC-------CCCCCCCCC Q lcl|Aclame:pro 372 DLP-APENTNKKT-------TGQSNEPVP 392 (392) Q Consensus 372 e~~-~~e~~~~~~-------~gd~~~p~p 392 (392) |.. ..-++.++. +++.+.+.| T Consensus 400 d~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 428 (457) T protein:vir:13 400 EKYRVPLNLGEVGEEPEPEPAPAPPAIEP 428 (457) T ss_pred cceeeccccccccccccccccCCCCCCCC Confidence 211 111111111 111111111 No 27 >protein:vir:105064 Length: 421 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1465 # MgeName: phiKO2 # Cross-refs: genbank:acc:YP_006584;genbank:gi:46402090;genbank:GeneID:2777930 Probab=100.00 E-value=5.5e-81 Score=460.60 Aligned_cols=374 Identities=15% Similarity=0.153 Sum_probs=300.5 Q ss_pred chhhHhhcccccccccccccccccccchhhhhh---hhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIME---SLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~ 79 (392) |.|+++++++..+... . ..+..++. .....+|..|+.++|+++++||+||++||++||+|||++|++.. T Consensus 1 m~~~~~~~~~~~~~s~--~------~~w~~~~~~~~~~~~~~g~~vt~~~al~~~~v~~~i~~Ia~~iA~lp~~~~~~~~ 72 (421) T protein:vir:10 1 MFIPQMFEGKKRSVSG--G------GFWEAMLGGVRSSHSKAGVMITPETALALSAVRACVTLLAESVAQLPVELYRRDK 72 (421) T ss_pred CCCcchhcccccccCc--c------hhhHHHhhhhccCcccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEEcC Confidence 9999998877644211 1 11111111 12234578899999999999999999999999999999987542 Q ss_pred -------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEE Q lcl|Aclame:pro 80 -------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYN 146 (392) Q Consensus 80 -------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~ 146 (392) ..++.+||++||+++||+.++.+++++||+|++++|+.+|+|++||||+|+.|++..+.++.. ++. T Consensus 73 ~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~v~~~~~g~~-~y~ 151 (421) T protein:vir:10 73 NGGRQRATDHPIYDLIHSQPNKKDTSFEYFEQQQGLLGLEGNCYSIIDRDGKGYPKELIPINPKKVIVLKGPDGMP-YYE 151 (421) T ss_pred CCceeecccchHHHHHhhcccCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEecCceEEEEECCCceE-EEE Confidence 134578999999999999999999999999999999999999999999999999988776543 343 Q ss_pred EEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC----Cc Q lcl|Aclame:pro 147 ITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG----LL 222 (392) Q Consensus 147 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~----~~ 222 (392) +... + .+++.++|+|+++++.++ ++|+||+..++.++..+.++++++.++|+||++|+|+|++++.. ++ T Consensus 152 ~~~~----g--~~~~~~eiih~~~~~~d~-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~ 224 (421) T protein:vir:10 152 IPEI----G--ETLPMRMMHHVKVFSLDG-YIGSSPIQTNADVLGLNLAVEEHASAVFRRGATMSGVIERPKEAPAIKSQ 224 (421) T ss_pred EcCC----C--cEEchhhEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCccCccCCH Confidence 3222 1 258899999999988776 67999999999999999999999999999999999999998643 22 Q ss_pred h--HHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-ch-HHH Q lcl|Aclame:pro 223 S--DKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-SS-IQQ 298 (392) Q Consensus 223 ~--~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-~~-~~~ 298 (392) + ++.++.|.+.+.|..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||..+.++ ++ +++ T Consensus 225 e~~~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~ 304 (421) T protein:vir:10 225 EKIDQLLAKWTDRYSGINNMFSVALLQEGMSYKQMSQDNEKAQLLQSRQWGVEEVCRLYKIPPHMVQMLAKATNNNIEHQ 304 (421) T ss_pred HHHHHHHHHHHHHhcCccccCcceecCCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcCCCcCCccccHHHH Confidence 2 2346677888889999999999999999999999999999999999999999999999999999765433 34 467 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc Q lcl|Aclame:pro 299 ISGMYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK 371 (392) Q Consensus 299 ~~~~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~ 371 (392) ..+|+++||.|++..|+++|+.+|++ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++.. T Consensus 305 ~~~f~~~tl~P~~~~ie~~ln~kL~~~~~~~~~~v~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~gg 384 (421) T protein:vir:10 305 GLQFVMYTLLAWLKRHEGALQRDLLLPSERRDLYIEFNVSGLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLPPIAGG 384 (421) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Confidence 88999999999999999999999864 47899999999999999999999999999999999999865555433 Q ss_pred ccccc-cCC----CCCCC-CCCCCCCC Q lcl|Aclame:pro 372 DLPAP-ENT----NKKTT-GQSNEPVP 392 (392) Q Consensus 372 e~~~~-e~~----~~~~~-gd~~~p~p 392 (392) |.... -+. ...++ ++.....| T Consensus 385 D~~~~~~n~~~~~~~~~~~~~~~~~~~ 411 (421) T protein:vir:10 385 DKYLTPLNMVDSAQIIPGDKKPTAQQM 411 (421) T ss_pred ceeeeccccccccccccCCCCcccccC Confidence 32111 111 11111 11111222 No 28 >protein:vir:7853 Length: 518 # NCBI annotation: gp10 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:150 # MgeName: CJW1 # Cross-refs: genbank:acc:NP_817460;genbank:gi:29565889;genbank:GeneID:1259085 Probab=100.00 E-value=1.9e-80 Score=457.64 Aligned_cols=385 Identities=14% Similarity=0.149 Sum_probs=303.8 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCC---CCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGD---NNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~ 79 (392) |=+-+-.. ...++.....+...+..++.+..+. ....+....++++|+||+||++||++||++||++|++.. T Consensus 1 ~~~~~~~~-----~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~V~acV~~IA~~iA~lp~~l~~~~~ 75 (518) T protein:vir:78 1 MLLANGQT-----LSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSG 75 (518) T ss_pred CcccCcee-----eccchhhhhhhhhhhcccccceeceecccccchhhHHhhhhHHHHHHHHHHHHhhccCceEEEEEcC Confidence 32222111 1111111111111111112222211 122344567889999999999999999999999997543 Q ss_pred -----------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEE Q lcl|Aclame:pro 80 -----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNIT 148 (392) Q Consensus 80 -----------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~ 148 (392) ..++.+||++||+++||+.++.+|+++||+|+++.|+.+|++++|||++|+.|++..+.+++.+.|.+. T Consensus 76 ~~~~~~~~~~~~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~~~G~~~~L~~l~p~~Vtv~~~~~~~~~~y~~~ 155 (518) T protein:vir:78 76 DTETEEHDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQ 155 (518) T ss_pred CccccccchHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEECCCceEEEEcCCCCEEEEEEE Confidence 235789999999999999999999999999999999999999999999999999999988888888888 Q ss_pred ecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH--HH Q lcl|Aclame:pro 149 FDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KD 226 (392) Q Consensus 149 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~--~~ 226 (392) .....++..+.+++++|||++++++++..+|+||+..++..|..+.++++++.++|+||++|+|+|++++..++++ +. T Consensus 156 ~~~~~~~~~~~~~~~eIiHir~~~~dg~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~Ng~~p~gvl~~~~~ls~e~~~~~ 235 (518) T protein:vir:78 156 AGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSPEAQQRL 235 (518) T ss_pred ecCCccceeEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHHH Confidence 7777777888999999999999999998889999999999999999999999999999999999999998776654 34 Q ss_pred HHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-ch-HHHHHHHHH Q lcl|Aclame:pro 227 KASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-SS-IQQISGMYA 304 (392) Q Consensus 227 ~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-~~-~~~~~~~~~ 304 (392) ++.|.+.+.|..|+|+++||++|++|++++++++|+||+|++++++++||++|||||++||+.++++ ++ +++...|++ T Consensus 236 k~~~~~~~~G~~nag~~~vL~~G~~~~~l~~~~~d~q~le~r~~~~~eIa~afgVPp~~lg~~~~st~sn~e~~~~~f~~ 315 (518) T protein:vir:78 236 REQFDRAHAGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYR 315 (518) T ss_pred HHHHHHHhcCcccCCceeEcCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccCCCCCchhHHHHHHHHHH Confidence 5677888889999999999999999999999999999999999999999999999999999765433 33 567889999 Q ss_pred HHHHHHHHHHHHHHHHHhhh------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCC-c-cccc-c Q lcl|Aclame:pro 305 SALNRYLRPAISELEYKLSD------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYI-P-KDLP-A 375 (392) Q Consensus 305 ~~l~p~l~~i~~~l~~~l~~------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~-~-~e~~-~ 375 (392) +||.|++..|+++|+.+|++ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++ | .|.. . T Consensus 316 ~tL~P~~~~ie~eln~~L~~~~~~~~~~~fd~~~Llr~D~~~r~~~~~~~~~~G~lT~NE~R~~~gl~pie~~~gD~~~v 395 (518) T protein:vir:78 316 DTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYA 395 (518) T ss_pred HHHHHHHHHHHHHHHHhhcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeee Confidence 99999999999999999874 468999999999999999999999999999999999998544443 1 1111 0 Q ss_pred ccCCCCCC-------CCCCCCC--CC Q lcl|Aclame:pro 376 PENTNKKT-------TGQSNEP--VP 392 (392) Q Consensus 376 ~e~~~~~~-------~gd~~~p--~p 392 (392) .-++.|+. .|++... .| T Consensus 396 ~~n~~pl~~~~~~~~~g~~~~~~~~~ 421 (518) T protein:vir:78 396 NSALQPLGATPDGAVEGEEAPAPKRP 421 (518) T ss_pred cccceecccccccccCCCCCCCCCCC Confidence 11111111 0111100 01 No 29 >protein:vir:4337 Length: 434 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:93 # MgeName: D3 # Cross-refs: genbank:acc:NP_061500;genbank:gi:9635589;genbank:GeneID:1262858 Probab=100.00 E-value=2.2e-80 Score=457.31 Aligned_cols=386 Identities=16% Similarity=0.185 Sum_probs=310.3 Q ss_pred CcchhhHhhccccccccccc--ccccccccchhhhhhhhcC---CCCcccchhhhhcchHHHHHHHHHHHhhhhCceeee Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGS--VQSYFPDGNDAQIMESLLG---DNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAE 75 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~ 75 (392) |-=.+++.+.+....+..+. .........+..+|..+.+ .+++.|+.++||++++||+||++||++||+||+++| T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~v~~~~al~~~~V~~~i~~ia~~ia~lp~~~~ 80 (434) T protein:vir:43 1 MSKSLGKVLSSATSAPRSSLFGWGGKTIRLTDGAFWSQFLGRESSSGKKVTVDKAMKLSAVWACVRLISTSVAGLPLGVY 80 (434) T ss_pred CccchhhhhhhcccccchhhhcccccccccCchHHHHHHhcCCccCCceechhhhhccHHHHHHHHHHHHhhhhCceEEE Confidence 66677776665554443321 1222333455566666554 357889999999999999999999999999999998 Q ss_pred ccccc-------------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccce Q lcl|Aclame:pro 76 KKKNQ-------------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENG 142 (392) Q Consensus 76 ~~~~~-------------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~ 142 (392) +++.+ .++.+||++||+++||+.++.+++++||+|+++.++ +|+|++||||+|+.|++..+.++.. T Consensus 81 ~~~~~g~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~~~-~G~~~~L~~l~p~~v~~~~~~~g~~ 159 (434) T protein:vir:43 81 ERKADGSRVDARSFPLYDVVHNSPNDDMTAFQFWQAMVASMLLWGNAYAEIRRA-AGRPAALDFLLPSRVDLECDENGRL 159 (434) T ss_pred EEcCCCccccccccHHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCcceEEEEcCCCeE Confidence 76432 245799999999999999999999999999998876 7999999999999999998877655 Q ss_pred EEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCc Q lcl|Aclame:pro 143 MYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLL 222 (392) Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~ 222 (392) .|+.+ .. .+..+.+++++|||+++++.++ .+|+||+..++..+..+.+++++..++|+||++|+|++++++..++ T Consensus 160 ~y~~~-~~---~g~~~~~~~~eVih~~~~~~dg-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~ 234 (434) T protein:vir:43 160 KYFYT-TK---KGARREIERTNMLHIPAFTLDG-RIGLSAIRYGVDVFGSVMSAEDAANGTFKNGLLPTVAFKVDRILQP 234 (434) T ss_pred EEEEE-ec---CceEEEEccccEEEecCcCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEecCCCCCH Confidence 54433 22 2456789999999999987776 5799999999999999999999999999999999999999987766 Q ss_pred hH-HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---ch-HH Q lcl|Aclame:pro 223 SD-KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---SS-IQ 297 (392) Q Consensus 223 ~~-~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---~~-~~ 297 (392) ++ +..+++.+.+.+..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||..+.++ ++ ++ T Consensus 235 e~~~~~r~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~s~~e~ 314 (434) T protein:vir:43 235 AQREEFREYVKSVSGAMNSGRSPVLEQGITPETIGINPVDAQLLETREHGVIEICRWFGVPPWMIGQTDKGSNWGTGLEQ 314 (434) T ss_pred HHHHHHHHHHHHhcCccccCCccccCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcCCccccchHHH Confidence 53 233455566788899999999999999999999999999999999999999999999999999755432 33 45 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCc Q lcl|Aclame:pro 298 QISGMYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIP 370 (392) Q Consensus 298 ~~~~~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~ 370 (392) +...|+.+||.|++..|+++|+.+|++ +++||...+++.|.+++++.+.+++++|++|+||+|++++..+++. T Consensus 315 ~~~~f~~~~L~P~~~~ie~~ln~kL~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~p~~g 394 (434) T protein:vir:43 315 QMLAFLTFSISSITNQIQQCVNKRLLTAPERIRYYAEFSLEGFLKADSAGRAAWYSTMAQNGFMTRNEGRRKENLPELPG 394 (434) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCChhhhcCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCC Confidence 678899999999999999999999863 4789999999999999999999999999999999999986655543 Q ss_pred ccccc-ccCCCCCCCC---------------CCCCCCC Q lcl|Aclame:pro 371 KDLPA-PENTNKKTTG---------------QSNEPVP 392 (392) Q Consensus 371 ~e~~~-~e~~~~~~~g---------------d~~~p~p 392 (392) .|... .-+..|+... +.++|-| T Consensus 395 gD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (434) T protein:vir:43 395 GDILTVQSNLVPIDQLGQSNKSQAVRAALMNWFSQPEP 432 (434) T ss_pred CCeEeeccCccchhhhhccCCCcchhhhhhccCCCCCC Confidence 33221 1122222211 1223333 No 30 >protein:vir:101648 Length: 518 # NCBI annotation: gp11 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1515 # MgeName: 244 # Cross-refs: genbank:acc:YP_654766;genbank:gi:109302764;genbank:GeneID:4156082 Probab=100.00 E-value=2.3e-80 Score=457.24 Aligned_cols=384 Identities=14% Similarity=0.166 Sum_probs=302.9 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcC---CCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLG---DNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~ 79 (392) |=+-+ .+....++.....+...+...+.+..+ .....+....++++++||+||++||++||+||++++++.. T Consensus 1 ~~~~~-----~~~~~~p~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~V~acV~~IA~~iA~lpl~l~~~~~ 75 (518) T protein:vir:10 1 MLLAN-----GQTLSAPAMAELSPQMQDSYYYAPAVGMQLERQFSLYGGIYKNQPWVRTVIAKRAQALARLPVKCMFTSG 75 (518) T ss_pred CcccC-----ceeecCchhhhhhhhhhcccccccccceecccccchhhHHHhhhHHHHHHHHHHHHhhccCceEEEEEcC Confidence 22211 111111111111111111111212111 1122344556889999999999999999999999988643 Q ss_pred c-----------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEE Q lcl|Aclame:pro 80 Q-----------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNIT 148 (392) Q Consensus 80 ~-----------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~ 148 (392) + .++.+||++||+++||+.++.+++++||+|+++.|+.+|++++|||++|+.|++..+.+++.+.|.+. T Consensus 76 ~~~~~~~~~~~~~Ll~~PN~~~t~~~F~~~lv~~lll~Gnay~~i~r~~~G~~~~L~~l~p~~v~v~~~~~~~~~~y~~~ 155 (518) T protein:vir:10 76 DTETEESDTGYAKLLADPCEYLDPFAFWEWVASTLDIYGETYLAIQKNKSGTPEKLMPMHPSRVAIKRNSRTGRYEYYFQ 155 (518) T ss_pred CCceeccchHHHHHHcCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCCceEEEEcCCCCEEEEEEE Confidence 2 35789999999999999999999999999999999999999999999999999999988888888888 Q ss_pred ecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH--HH Q lcl|Aclame:pro 149 FDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KD 226 (392) Q Consensus 149 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~--~~ 226 (392) ...+.++..+.+++++|||++++++++..+|+||+..++..|..+.++++++.++|+||++|+|++++++..++++ +. T Consensus 156 ~~~~~~~~~~~~~~~eViHir~~s~dg~~~G~spi~~a~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~ls~e~~~~~ 235 (518) T protein:vir:10 156 AGAGVGTQLVSFADDEVVPIRFFNPDGLERGLSLMESLKSTIFSEDSSRNATAAMWKNAGRPNLVLRHEKRLSEAAQQRL 235 (518) T ss_pred ecCCccceEEEecCCcEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHHHHH Confidence 7777677788999999999999999998899999999999999999999999999999999999999998776654 34 Q ss_pred HHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-ch-HHHHHHHHH Q lcl|Aclame:pro 227 KASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-SS-IQQISGMYA 304 (392) Q Consensus 227 ~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-~~-~~~~~~~~~ 304 (392) ++.|.+.+.|..|+|+++||++|++|++++++++|+||+|++++++++||++|||||++||+.++++ ++ +++...|++ T Consensus 236 k~~~~~~~~G~~nag~v~vL~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~lg~~~~~t~sn~eq~~~~f~~ 315 (518) T protein:vir:10 236 REQFDRAHSGSSNTGKTMVVEEGMEPIPLQLTAVEMQFIEARQLNREEVCGVYDIAPPIVHILDRATFSNISAQMRAFYR 315 (518) T ss_pred HHHHHHHhcCccccCcceEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccCCCCCchhHHHHHHHHHH Confidence 5667888889999999999999999999999999999999999999999999999999999755432 33 567889999 Q ss_pred HHHHHHHHHHHHHHHHHhhh------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCC-c-ccccc- Q lcl|Aclame:pro 305 SALNRYLRPAISELEYKLSD------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYI-P-KDLPA- 375 (392) Q Consensus 305 ~~l~p~l~~i~~~l~~~l~~------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~-~-~e~~~- 375 (392) +||.|++..|+++|+++|++ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++ | .|... T Consensus 316 ~tL~P~l~~ie~~ln~~L~~~~~~~~~~~fd~~~llr~D~~~r~~~~~~~~~~G~lT~NE~R~~~Gl~pie~~~gD~~~~ 395 (518) T protein:vir:10 316 DTMAIPIARIQSAMDKYVGQYWVRKNRMKFDIDDVIQPDWEAKSESTQKMVNSGVATPNEGREIMGLPRSDDPKADELYA 395 (518) T ss_pred HHHHHHHHHHHHHHHHhhcccccCCceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeee Confidence 99999999999999999975 478999999999999999999999999999999999998544432 1 11110 Q ss_pred ccCCCCCC----C---CCCCCCCC Q lcl|Aclame:pro 376 PENTNKKT----T---GQSNEPVP 392 (392) Q Consensus 376 ~e~~~~~~----~---gd~~~p~p 392 (392) .-++.|+. + |++ .|.| T Consensus 396 ~~n~~pl~~~~~~~~~g~~-~~~~ 418 (518) T protein:vir:10 396 NSALQPLGATPDGAVEGEE-APAP 418 (518) T ss_pred cccceecccccccccCCCC-CCCC Confidence 00111110 0 110 1111 No 31 >protein:vir:4454 Length: 414 # NCBI annotation: Portal Protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:96 # MgeName: ST64B # Cross-refs: genbank:acc:NP_700377;genbank:gi:23505449;genbank:GeneID:955656 Probab=100.00 E-value=2.5e-80 Score=456.98 Aligned_cols=379 Identities=16% Similarity=0.209 Sum_probs=302.9 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||++++++........... ....+...+...++..|++++++++++||+||++||++||++|++++++.. T Consensus 1 Mg~f~~lf~r~~~~~~~~~~~-----~~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~Ia~~ia~~p~~~~~~~~~~~ 75 (414) T protein:vir:44 1 MVFFSGLFQRKSDAPVTTPAE-----LADAIGLSYDTYTGKQISSQRAMRLTAVFSCVRVLAESVGMLPCNLYHLNGSLK 75 (414) T ss_pred CchhhhhhccCccCcccchhh-----HhHhhccCccccCCceechhhhhccHHHHHHHHHHHHHhccCceEEEEecCCce Confidence 999986654432222111111 111111122344678899999999999999999999999999999997543 Q ss_pred ---------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEec Q lcl|Aclame:pro 80 ---------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFD 150 (392) Q Consensus 80 ---------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~ 150 (392) ..++.+||++||+++||+.++.+++++||+|+++.++ +|++++|||++|+.|++..+.++... |.+... T Consensus 76 ~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gna~~~i~~~-~g~~~~L~~l~~~~v~~~~~~~~~~~-y~~~~~ 153 (414) T protein:vir:44 76 QRATGERLHKLISTHPNGYMTPQEFWELVVTCLCLRGNFYAYKVKA-FGEVAELLPVDPGCVVPKLNSSWEPV-YQVTFP 153 (414) T ss_pred eecccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEeC-CCcEEEEEEEcCceEEEEECCCCcEE-EEEEec Confidence 2345799999999999999999999999999999876 69999999999999999887765544 444433 Q ss_pred CcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH--HHHH Q lcl|Aclame:pro 151 DPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KDKA 228 (392) Q Consensus 151 ~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~--~~~~ 228 (392) + +....+++++|||+++++.++ ++|+||+..++.++..+.+++++..++|+||++|+|++++++..++++ +.++ T Consensus 154 ~---g~~~~~~~~evih~~~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~ 229 (414) T protein:vir:44 154 D---GSTDVLSQEDIWHVRTLTLDG-LVGLNPIAYAREAISLAAATEEHGARLFSNGAVTSGVLRTEQTLSDQAYERLKK 229 (414) T ss_pred C---ceEEEEccccEEEecCCCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCHHHHHHHHH Confidence 2 456689999999999887766 679999999999999999999999999999999999999998776654 3456 Q ss_pred HHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-ch-HHHHHHHHHHH Q lcl|Aclame:pro 229 SRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-SS-IQQISGMYASA 306 (392) Q Consensus 229 ~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-~~-~~~~~~~~~~~ 306 (392) ++.+.+.+..|+|++++|++|++|++++.+++|+||+|++++++++||++|||||++||+.++++ ++ +++...|+++| T Consensus 230 ~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~~~~~~t~~n~e~~~~~~~~~~ 309 (414) T protein:vir:44 230 DFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYS 309 (414) T ss_pred HHHHHhcCccccCcceecCCCceEEEccCChHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHH Confidence 77888889999999999999999999999999999999999999999999999999999765433 34 46788999999 Q ss_pred HHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccccc-ccC Q lcl|Aclame:pro 307 LNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPA-PEN 378 (392) Q Consensus 307 l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~-~e~ 378 (392) |+|+++.|+++|+.+|++ +++||...+++.|.+++++.+++++++|++|+||+|++++..+++..|... .-+ T Consensus 310 l~P~~~~ie~~ln~~L~~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~~ggD~~~~~~n 389 (414) T protein:vir:44 310 LVPYLTRIEQRINTGLVRKSKQGVFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMN 389 (414) T ss_pred HHHHHHHHHHHHHhhcCCccccCceEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeccccc Confidence 999999999999999964 368999999999999999999999999999999999998555544333211 111 Q ss_pred CCCC---------CCCCCCCCCC Q lcl|Aclame:pro 379 TNKK---------TTGQSNEPVP 392 (392) Q Consensus 379 ~~~~---------~~gd~~~p~p 392 (392) .... ++.+.++..| T Consensus 390 ~~~~~~~~~~~~~~~~~~~~d~~ 412 (414) T protein:vir:44 390 MTTKPSDGSKAGKQKDNANADET 412 (414) T ss_pred ccccCCccccCCCCCCCCCCCCC Confidence 1111 1112222222 No 32 >protein:vir:1884 Length: 424 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037664;genbank:gi:9634122;genbank:GeneID:1262519 Probab=100.00 E-value=4e-80 Score=455.86 Aligned_cols=375 Identities=14% Similarity=0.151 Sum_probs=297.5 Q ss_pred CcchhhHhhcccccc-cccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc Q lcl|Aclame:pro 1 MILPILNFINQTNDP-PEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN 79 (392) Q Consensus 1 m~Mg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~ 79 (392) ||-.|.++|.+.... +...+...+ +.+.....+..|+.++|+++++||+||++||++||+||+++|++.. T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~v~~~~al~~~~v~~cv~~Ia~~iA~lp~~~~~~~~ 86 (424) T protein:vir:18 16 WWARLQSWFVGGRLVTPNQGSQTGP---------VSAHGHLGDSSINDERILQISTVWRCVSLISTLTACLPLDVFETDQ 86 (424) T ss_pred hHHHHHhhhcccccccccccccccc---------cccccccccccccHHHhhccHHHHHHHHHHHHhhccCceEEEEeec Confidence 666666666433221 111111111 1111223466799999999999999999999999999999987432 Q ss_pred c--------------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEE Q lcl|Aclame:pro 80 Q--------------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYY 145 (392) Q Consensus 80 ~--------------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~ 145 (392) + .++.+||++||+++||+.++.+++++||+|++++|+.+|++++|||++|+.|++..+ ++.++| T Consensus 87 ~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~pl~~~~V~v~~~--~~~~~y 164 (424) T protein:vir:18 87 NDNRKKVDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRNSAGDVISLLPLQSANMDVKLV--GKKVVY 164 (424) T ss_pred CCceeeeccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCcceEEEEc--CCeEEE Confidence 1 245689999999999999999999999999999999999999999999999998765 455666 Q ss_pred EEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC-CchH Q lcl|Aclame:pro 146 NITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG-LLSD 224 (392) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~-~~~~ 224 (392) .+..+ +..+.+++++|||+++++.++ .+|+||+..++.++..+.+++++..++|+||++|+|++++++.. ++++ T Consensus 165 ~~~~~----g~~~~~~~~eIih~r~~~~dg-~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~p~gil~~~~~~l~~e~ 239 (424) T protein:vir:18 165 RYQRD----SEYADFSQKEIFHLKGFGFTG-LVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQ 239 (424) T ss_pred EEEeC----CeEEEeccccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCcCCCHHH Confidence 65543 356789999999999988776 57999999999999999999999999999999999999998753 3333 Q ss_pred H--HHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---ch-HHH Q lcl|Aclame:pro 225 K--DKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---SS-IQQ 298 (392) Q Consensus 225 ~--~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---~~-~~~ 298 (392) + .++.+. ...+..|+|+++||++|++|++++++++|+||+|++++++++||++|||||++||..++++ ++ +++ T Consensus 240 ~~~~~~~~~-~~~~g~nag~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq~ 318 (424) T protein:vir:18 240 RSQVEENFK-EIAGGPVKKRLWILEAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQQ 318 (424) T ss_pred HHHHHHHHH-HHhCCcccCCceeccCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccccHHHH Confidence 2 233444 4556678999999999999999999999999999999999999999999999999765443 33 457 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh-------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc Q lcl|Aclame:pro 299 ISGMYASALNRYLRPAISELEYKLSDH-------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK 371 (392) Q Consensus 299 ~~~~~~~~l~p~l~~i~~~l~~~l~~~-------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~ 371 (392) ..+|+++||.|++++|+++|+.+|++. ++||.+.+++.|.+++++.+.+++++|++|+||+|++++..+++.. T Consensus 319 ~~~f~~~tl~P~~~~ie~~l~~~L~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~gG 398 (424) T protein:vir:18 319 NLGFLQYTLQPYISRWENSIQRWLIPAKDVGRIHAEHNLDGLLRGDSASRAAFMKAMGEAGLRTINEMRRTDNLPPLPGG 398 (424) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCc Confidence 789999999999999999999999743 7899999999999999999999999999999999999855555433 Q ss_pred cccc-ccCCCCCC-CCCCCCCCC Q lcl|Aclame:pro 372 DLPA-PENTNKKT-TGQSNEPVP 392 (392) Q Consensus 372 e~~~-~e~~~~~~-~gd~~~p~p 392 (392) |... .-++.|+. .|...+|.. T Consensus 399 D~~~~~~n~~~l~~~~~~~~p~~ 421 (424) T protein:vir:18 399 DVAMRQSQYVPITDLGTNKEPRN 421 (424) T ss_pred CeeeeccCccchHhhhccCCCcc Confidence 3221 22233332 233334433 No 33 >protein:vir:4509 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:97 # MgeName: V # Cross-refs: genbank:acc:NP_599035;genbank:gi:19548993;genbank:GeneID:935206 Probab=100.00 E-value=1.6e-79 Score=452.52 Aligned_cols=377 Identities=15% Similarity=0.152 Sum_probs=296.0 Q ss_pred CcchhhH-hhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc Q lcl|Aclame:pro 1 MILPILN-FINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN 79 (392) Q Consensus 1 m~Mg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~ 79 (392) -.+-||+ +|+++...... .......+.......++..|+.++||++++||+||++||++||++|++++++.. T Consensus 14 ~~~~~~~~lf~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~vs~~~al~~~~v~~cv~~Ia~~iA~lp~~v~~~~~ 86 (424) T protein:vir:45 14 GGRVLLDALFRSKSLENPS-------TPITGDAVDTDGLFRADVYVSPETAMKLAAVYSCIYVLSSSLAQMPLHVMRRHK 86 (424) T ss_pred chhHHHHhhccccCCCCCc-------cccchhhhhhhccccCCceechHHhhccHHHHHHHHHHHHHHhhCceEEEEecC Confidence 3334444 44443322111 111111111111223577899999999999999999999999999999997542 Q ss_pred ------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEE Q lcl|Aclame:pro 80 ------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNI 147 (392) Q Consensus 80 ------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~ 147 (392) ..++.+||++||+++||+.++.+++++||+|++|.|+.+|++++|||++|+.|++..+ ++.+.|.+ T Consensus 87 ~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~i~~~--~~~~~y~~ 164 (424) T protein:vir:45 87 GKVEPARDHPAFYLVHDEPNTWQTSYKWRELKQRHILGWGNGYTWVKRNRRGEVISLDCCMPWETTLMNT--GGRYTYGL 164 (424) T ss_pred CceeecccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEecCceEEEEEc--CCeEEEEE Confidence 1245799999999999999999999999999999999999999999999999998654 34455544 Q ss_pred EecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH--H Q lcl|Aclame:pro 148 TFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--K 225 (392) Q Consensus 148 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~--~ 225 (392) .... ....+++++|||+++++.++ .+|+||+..++.+|..+.++++++.++|+||++|+|++++++..++++ + T Consensus 165 ~~~~----~~~~~~~~eVih~r~~~~d~-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~~~ 239 (424) T protein:vir:45 165 YNEY----GAFAISPDDMIHIRALGNNQ-KMGLSPIMQHAETIGMGMSGQKYTESFFSGNARPAGIVSVKSGLNKESWGW 239 (424) T ss_pred EecC----ceEEECcccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHHHH Confidence 4332 24579999999999988766 579999999999999999999999999999999999999998776653 3 Q ss_pred HHHHHHHHHhcc-ccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-ch-HHHHHHH Q lcl|Aclame:pro 226 DKASRSRSFMKR-SRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-SS-IQQISGM 302 (392) Q Consensus 226 ~~~~~~~~~~~~-~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-~~-~~~~~~~ 302 (392) .++.+.+.+.+. +|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||+.++++ ++ +++..+| T Consensus 240 ~~~~~~~~~~g~~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~eq~~~~f 319 (424) T protein:vir:45 240 LKDQWQKASQALRRQENKTMLLPADLDYKALTVSPVDAQIIDMMKLNRSMIAGIFNIPAHMINDLEKATFSNISAQAIQF 319 (424) T ss_pred HHHHHHHHhccccccCCceeEcCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHH Confidence 355667777775 68999999999999999999999999999999999999999999999999765433 33 5678899 Q ss_pred HHHHHHHHHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccc Q lcl|Aclame:pro 303 YASALNRYLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLP 374 (392) Q Consensus 303 ~~~~l~p~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~ 374 (392) +++||.|++++|+++|+.+|++ +++||.+.+++.|.+++++.+.+++++|++|+||+|++++..+++..|.. T Consensus 320 ~~~tL~P~~~~ie~~ln~kLl~~~e~~~g~~i~fd~~~llr~d~~~r~~~~~~~~~~g~~T~NE~R~~~gl~pi~ggD~~ 399 (424) T protein:vir:45 320 VRYTMMPWVTNWEQELNRRLFTRAELAAGYYVRFNLTGLLRGTPQERAQFYHFAITDGWMSRNEARAFEDMNPVEGLDEM 399 (424) T ss_pred HHHHHHHHHHHHHHHHHHhcCChhhhcCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCccee Confidence 9999999999999999999964 37899999999999999999999999999999999998855554433321 Q ss_pred cccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 375 APENTNKKTTGQSNEPVP 392 (392) Q Consensus 375 ~~e~~~~~~~gd~~~p~p 392 (392) ...++..+..++.+|.| T Consensus 400 -~~~~n~~~~~~~~~~~~ 416 (424) T protein:vir:45 400 -LVSVNAANPAGDFKPPK 416 (424) T ss_pred -eecccccccccccCCCC Confidence 11222222112222222 No 34 >protein:vir:102080 Length: 429 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1503 # MgeName: Fah # Cross-refs: genbank:acc:YP_512313;genbank:gi:89152482;genbank:GeneID:3953073 Probab=100.00 E-value=1.2e-79 Score=453.31 Aligned_cols=385 Identities=16% Similarity=0.113 Sum_probs=302.8 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhh-cCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESL-LGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~- 80 (392) ||||+.++........... ........+..++ .+.++..++.++|+++++|++||++||++||+||++++++... T Consensus 1 M~~~~~~f~~~~r~~~~~~---~~~~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~l~~~~~~~~~~~ 77 (429) T protein:vir:10 1 MDSVKKFFNFEKRQTSQVI---ELNKDDEKLLEWLGISPSTISVKGKNALKVATVFACIKILSESVSKLPLKIYQEDEYG 77 (429) T ss_pred CchhhhhhcccccCccccc---ccCCChHHHHHHhcCCCCcceechhhhhccHHHHHHHHHHHHhhccCceEEEEecCCc Confidence 9999654432211111100 1111222222332 2345678899999999999999999999999999999976422 Q ss_pred -----------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceE---EEE Q lcl|Aclame:pro 81 -----------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGM---YYN 146 (392) Q Consensus 81 -----------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~---~~~ 146 (392) .++.+||++||+++||+.++.+++++||+|+++.|+.+|++++|||++|+.|++..++.+... ... T Consensus 78 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~~~~~~~~~~~ 157 (429) T protein:vir:10 78 IQRGTKHYLNNLLRLRPNPYMSSMNFFGSLEAQKNLYGNSYANIEFDRKGKVQALWPIDASKVTVYIDDVGLLNSKTKMW 157 (429) T ss_pred eeeccccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEcCcccccccceEE Confidence 345699999999999999999999999999999999999999999999999999887654321 111 Q ss_pred EEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH-- Q lcl|Aclame:pro 147 ITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD-- 224 (392) Q Consensus 147 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~-- 224 (392) +.+. .++..+.+++++|||+++..+.+..+|+||+..++..+..+.+++++..++|+||++|+|++++++..++++ T Consensus 158 ~~~~--~~g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~l~~e~~~ 235 (429) T protein:vir:10 158 YVVN--TGGQQRVLKPEEILHFKNGITLDGLVGVPTMEYLKSTLENSASADKFINNFYKQGLQVKGLVQYVGDLNEDAKK 235 (429) T ss_pred EEEc--cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEcCCCCCHHHHH Confidence 2222 345567899999999998766667889999999999999999999999999999999999999998766553 Q ss_pred HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc--chHHHHHHH Q lcl|Aclame:pro 225 KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQQISGM 302 (392) Q Consensus 225 ~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~--~~~~~~~~~ 302 (392) +.++.+.+.+.+..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||+.++++ +.+++..+| T Consensus 236 ~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~sn~e~~~~~f 315 (429) T protein:vir:10 236 VFRENFESMSSGLQNSHRIALMPVGYQFQPISLNMSDAQFLENTELTIRQIATAFGIKMHQLNDLSKATLNNIEQQQQQF 315 (429) T ss_pred HHHHHHHHHhccccccCceeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHH Confidence 335567777888899999999999999999999999999999999999999999999999998654433 335678899 Q ss_pred HHHHHHHHHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccc Q lcl|Aclame:pro 303 YASALNRYLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLP 374 (392) Q Consensus 303 ~~~~l~p~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~ 374 (392) ++.+|.|++++|+++|+++|++ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++..|.. T Consensus 316 ~~~~l~P~~~~ie~~ln~kl~~~~~~~~g~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD~~ 395 (429) T protein:vir:10 316 YTDTLQATLTMYEQEMTYKLFLDSELDKGFYSKFNVDAILRADIKTRYEAYRTGIQGGFLKPNEARSKEDLPPEAGGDRL 395 (429) T ss_pred HHHHHHHHHHHHHHHHHHhhcChhhcCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCee Confidence 9999999999999999999863 46889999999999999999999999999999999999855554322311 Q ss_pred c-ccCCC--------CCCCCCCCCCCC Q lcl|Aclame:pro 375 A-PENTN--------KKTTGQSNEPVP 392 (392) Q Consensus 375 ~-~e~~~--------~~~~gd~~~p~p 392 (392) . .-++- ...+|+++.-.. T Consensus 396 ~~~~n~~~~d~~~~~~~k~g~~~~~~~ 422 (429) T protein:vir:10 396 LVNGNMLPIDMAGQAYLKGGDTNGEVS 422 (429) T ss_pred eecccccchhhccccccCCCCCCCCCC Confidence 1 11111 123444333222 No 35 >protein:vir:5737 Length: 419 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:122 # MgeName: PY54 # Cross-refs: genbank:acc:NP_892048;genbank:gi:33770511;goa:Q7Y412;interpro:IPR006427;interpro:IPR006944;uniprot:Q7Y412;genbank:GeneID:1732929;interpro:IPR010994 Probab=100.00 E-value=6.7e-80 Score=454.63 Aligned_cols=375 Identities=16% Similarity=0.131 Sum_probs=302.8 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ-- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~-- 80 (392) |+|++|++++..... ..+. . ....+......+|..|+.++||++++||+||++||++||+||+++|++..+ T Consensus 1 m~~~~~~~~~~~~~~-~~~~---~---~~~~~~~~~~~~g~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~g~ 73 (419) T protein:vir:57 1 MFIPQFWKGRPSENR-VNWQ---V---VPGGMRSSSSQAGVIITPETALALSAVRACVTLLAESVAQLPCVLYRRTENGG 73 (419) T ss_pred CcchhhhccCCcccc-cccc---c---cccccccccccCCceechHHhhccHHHHHHHHHHHHhhccCceEEEEEcCCCc Confidence 999999987643211 1111 0 111233445567889999999999999999999999999999999875422 Q ss_pred -----------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEe Q lcl|Aclame:pro 81 -----------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITF 149 (392) Q Consensus 81 -----------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~ 149 (392) .++.+||++||+++||+.++.+|+++||+|++|+|+.+|++++|||++|+.|++..+.++. ++|.+. T Consensus 74 ~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~pl~~~~v~v~~~~~g~-~~y~~~- 151 (419) T protein:vir:57 74 REIAFDHPLHDLIRYQPNRKDTAFEYHEQTQGVLGLEGNSYSLIDRNGRGDITELIPINPHKVIVLKGPDGM-PYYDIP- 151 (419) T ss_pred eeccccchHHHHHhhccccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCcceEEEECCCce-EEEEEc- Confidence 2346899999999999999999999999999999999999999999999999998876654 333332 Q ss_pred cCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC----Cch-- Q lcl|Aclame:pro 150 DDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG----LLS-- 223 (392) Q Consensus 150 ~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~----~~~-- 223 (392) .. ...++.++|+|+++++.++ .+|+||+..++..+..+.++++++.++|+||++|+|+|+++... +++ T Consensus 152 -~~----~~~~~~~~vih~r~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~e~~ 225 (419) T protein:vir:57 152 -SI----GEILPMRMVHHIKSFSLDG-YIGTSPIQTNPDVLGLGIAVEQHAAQVFARGTTMSGVIERPFEAKAIASQAAV 225 (419) T ss_pred -CC----ceEEchhhEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHHccCCccEEEEecCcCCcccCHHHH Confidence 11 1368999999999987776 67999999999999999999999999999999999999986532 222 Q ss_pred HHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-ch-HHHHHH Q lcl|Aclame:pro 224 DKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-SS-IQQISG 301 (392) Q Consensus 224 ~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-~~-~~~~~~ 301 (392) ++.++.|.+.+.|..|+|++++|++|++|++++.+++|+||+|++++++++||++|||||++||+.++++ ++ +++... T Consensus 226 ~~~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~ 305 (419) T protein:vir:57 226 DAILAKWTERYGGVRNAFSVGMLQEGMTYKQLSQDNEKAQLLQSRQYTVNEVCRLYKVPPHMIQDLQKSTNNNIEHQGLQ 305 (419) T ss_pred HHHHHHHHHHhccccccccceecCCCceEEEcCCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCccccHHHHHHH Confidence 3446677888889999999999999999999999999999999999999999999999999999754432 33 567889 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccc Q lcl|Aclame:pro 302 MYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLP 374 (392) Q Consensus 302 ~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~ 374 (392) |+++||+|+++.|+++|+.+|++ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++..|.. T Consensus 306 f~~~~l~P~~~~ie~~l~~~ll~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~ggD~~ 385 (419) T protein:vir:57 306 YVIYTMLAILKRHESAMMRDLLLPSERRDFYIEFNVSSLLRGDQKSRYESYALGRQWGWLSVNDIRRMENLTPIPGGDKY 385 (419) T ss_pred HHHHHHHHHHHHHHHHHHhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCee Confidence 99999999999999999999864 47899999999999999999999999999999999999866555443322 Q ss_pred c-ccCCCCCCC-CCCCCCCC Q lcl|Aclame:pro 375 A-PENTNKKTT-GQSNEPVP 392 (392) Q Consensus 375 ~-~e~~~~~~~-gd~~~p~p 392 (392) . .-+..+... .+.+++.| T Consensus 386 ~~~~n~~~~~~~~~~~~~~~ 405 (419) T protein:vir:57 386 LTPLNMVDSKALTGIGKATP 405 (419) T ss_pred eeccccccccccccccCCCc Confidence 1 112222111 11222333 No 36 >protein:vir:1082 Length: 359 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:21 # MgeName: bIL309 # Cross-refs: genbank:acc:NP_076736;genbank:gi:13095846;genbank:GeneID:920394 Probab=100.00 E-value=1.3e-79 Score=453.05 Aligned_cols=352 Identities=29% Similarity=0.436 Sum_probs=297.7 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQGI 82 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~~ 82 (392) ||+|+.|+++.... +...............+..|+.++||++++||+||++||++||++|++ ..+....+ T Consensus 1 M~~~~~f~~r~~~~---------~~~~~~~~~~~~~~~~~~~v~~~~al~~~av~~cv~~ia~~ia~~p~~-~~~~~~~L 70 (359) T protein:vir:10 1 MSILNPFERRSSIT---------PNNYYPFMVQNGSIVPNSLVDATEALKNSDLYAVTSLISSDIAGTRFI-GNQVFTSV 70 (359) T ss_pred CcccchhhccccCC---------CCcchhhhhccccccCCcccCHHHhhcchHHHHHHHHHHHhhhcCccc-cchHHHHH Confidence 99999776544211 111111122222345677899999999999999999999999999994 44556778 Q ss_pred cccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcceeeeEEEec Q lcl|Aclame:pro 83 IDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQ 162 (392) Q Consensus 83 ~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (392) +.+||++||+++||+.++.+++++||+|++++|+.+|++.+|||++|+.|++..+++ .+.|.++.. .++....+++ T Consensus 71 ~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~g~~~~l~~l~~~~v~i~~~~~--~~~y~~~~~--~~~~~~~~~~ 146 (359) T protein:vir:10 71 LNNPSHLTNAFSFWQTAILNLLLNGNVFLAILKGDNSLMKELRLIPSNAITIDLTDD--TLTYEVNQF--DDYPSAKYNA 146 (359) T ss_pred hhcccccCCHHHHHHHHHHhccccCceEEEEEECCCCeEEEEEEeCCceEEEEEcCC--eEEEEEEec--CCceEEEEcc Confidence 899999999999999999999999999999999999999999999999999977643 344444332 2345678999 Q ss_pred eeEEEecCCCc----ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC-CchH--HHHHHHHHHHh Q lcl|Aclame:pro 163 SDLIHMKLLSI----DGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG-LLSD--KDKASRSRSFM 235 (392) Q Consensus 163 ~~vih~~~~~~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~-~~~~--~~~~~~~~~~~ 235 (392) +||||++.++. .+..+|+||+..++.++..+.+++++..++|+||++|+|+++++++. ++++ +.++.| +.+. T Consensus 147 ~evih~~~~~~~~~~~dg~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e~~~~~~~~~-~~~~ 225 (359) T protein:vir:10 147 SEMIHVKIMAYGVDTLHNLVGHSPLESLTSEIGQQKEANRLSLSTLKGALNPTSVVKVPQGTLSSEAKDSIRKEF-EKAN 225 (359) T ss_pred cceEEeccCCCCCCccCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHHHHHH-HHHh Confidence 99999997653 24568999999999999999999999999999999999999998743 3332 234444 4456 Q ss_pred ccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 236 KRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAI 315 (392) Q Consensus 236 ~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~ 315 (392) +..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||+.++.++++++.++++..++.|++.+|+ T Consensus 226 ~~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~~~e~~~~~~l~~~l~p~~ 305 (359) T protein:vir:10 226 GGNNSGRVMVLDQSADFSTVSINADVANYLNSMNWGRTQIAKAFGVSDSYLNGTGDQQSSLDQIKDLYVNALNRFIEPLI 305 (359) T ss_pred CccccCCceecCCCcceeeecCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCcccccHHHHHHHHHHHHHHHHHHHH Confidence 67899999999999999999999999999999999999999999999999998777777888999999999999999999 Q ss_pred HHHHHHhhhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCC Q lcl|Aclame:pro 316 SELEYKLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYI 369 (392) Q Consensus 316 ~~l~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~ 369 (392) ++|+.+|++.+++|....++.+...+...+.+++++|++|+||+|++++..|++ T Consensus 306 ~~l~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~G~~t~NE~R~~l~~~pv~ 359 (359) T protein:vir:10 306 SELRIKCDSSIGVDMSPITDYSNSVFKADILNWVKEGIIEPTEAKTLLESKGII 359 (359) T ss_pred HHHHHHhhhhhcccchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCC Confidence 999999999999999888888888888889999999999999999999777777 No 37 >protein:vir:189 Length: 424 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037699;genbank:gi:9634156;genbank:GeneID:1262529 Probab=100.00 E-value=6.7e-79 Score=449.16 Aligned_cols=377 Identities=14% Similarity=0.143 Sum_probs=294.9 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc- Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN- 79 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~- 79 (392) ++-.|.++|++.... ...... ... + +.+.....+..|+.++|+++++||+||++||++||+||+++|+... T Consensus 16 ~~~~~~~~f~~~~~~----~~~~~~--~~~-~-~~~~~~~~~~~v~~~~al~~~~v~~cv~~Ia~~iA~lp~~vy~~~~~ 87 (424) T protein:vir:18 16 WWARLKSWFVGGRLV----TPNQGS--QTG-P-VSAHGYLGDSSINDERILQISTVWRCVSLISTLTACLPLDVFETDQN 87 (424) T ss_pred hHHHHHhhccccccc----cccchh--hcc-c-cccccccccccccHHHhhccHHHHHHHHHHHHhhccCceEEEEeccC Confidence 333333444333211 111100 000 0 1111112356789999999999999999999999999999987432 Q ss_pred -------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEE Q lcl|Aclame:pro 80 -------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYN 146 (392) Q Consensus 80 -------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~ 146 (392) ..++.+||++||+++||+.++.+++++||+|++|+|+.+|++++|||++|..|++..+ ++.++|. T Consensus 88 ~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~--~~~~~y~ 165 (424) T protein:vir:18 88 DNRKKVDLSNPLARLLRYSPNQYMTAQEFREAMTMQLCFYGNAYALVDRNSAGDVISLLPLQSANMDVKLV--GKKVVYR 165 (424) T ss_pred CceeeeccccHHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCcceEEEEc--CCeEEEE Confidence 1245689999999999999999999999999999999999999999999999998765 4556666 Q ss_pred EEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC-CchHH Q lcl|Aclame:pro 147 ITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG-LLSDK 225 (392) Q Consensus 147 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~-~~~~~ 225 (392) +..+ +....+++++|||+++++.++ .+|+||+..++..|..+.+++++..++|+||++|+|++++++.. +++++ T Consensus 166 ~~~~----g~~~~~~~~eVihir~~~~dg-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~l~~e~~ 240 (424) T protein:vir:18 166 YQRD----SEYADFSQKEIFHLKGFGFTG-LVGLSPIAFACKSAGVAVAMEDQQRDFFANGAKSPQILSTGEKVLTEQQR 240 (424) T ss_pred EEeC----CeEEEeccccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCcCCCHHHH Confidence 5543 456789999999999988776 57999999999999999999999999999999999999998753 33332 Q ss_pred -HHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---ch-HHHHH Q lcl|Aclame:pro 226 -DKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---SS-IQQIS 300 (392) Q Consensus 226 -~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---~~-~~~~~ 300 (392) ..++..+.+.+..|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||+.++++ ++ +++.. T Consensus 241 ~~~~~~~~~~~~~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~eq~~~ 320 (424) T protein:vir:18 241 SQVEENFKEIAGGPVKKRLWILEAGFSTSAIGVTPQDAEMMASRKFQVSELARFFGVPPHLVGDVEKSTSWGSGIEQQNL 320 (424) T ss_pred HHHHHHHHHHhCCcccCCceeccCCceEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCCCCCcccccccHHHHHH Confidence 22333445566778999999999999999999999999999999999999999999999999765543 33 45778 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccc Q lcl|Aclame:pro 301 GMYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDL 373 (392) Q Consensus 301 ~~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~ 373 (392) +|+++||.|+++.|+++|+++|++ +++||.+.+++.|.+++++.++.++++|++|+||+|++++..+++..|. T Consensus 321 ~f~~~tl~P~~~~ie~~ln~~L~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~~~~G~~T~NE~R~~~gl~pi~ggD~ 400 (424) T protein:vir:18 321 GFLQYTLQPYISRWENSIQRWLIPSKDVGRLHAEHNLDGLLRGDSASRAAFMKAMGESGLRTINEMRRTDNMPPLPGGDV 400 (424) T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCe Confidence 999999999999999999999964 3789999999999999999999999999999999999985555543332 Q ss_pred cc-ccCCCCCCC-CCCCCCCC Q lcl|Aclame:pro 374 PA-PENTNKKTT-GQSNEPVP 392 (392) Q Consensus 374 ~~-~e~~~~~~~-gd~~~p~p 392 (392) .. .-++.|+.. |++.+|.. T Consensus 401 ~~~~~n~~~l~~~~~~~~~~~ 421 (424) T protein:vir:18 401 AMRQAQYVPITDLGTNKEPRN 421 (424) T ss_pred eeeccCccchhhhhccCCccc Confidence 22 223334332 33333333 No 38 >protein:vir:102118 Length: 409 # NCBI annotation: phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1641 # MgeName: phiSM101 # Cross-refs: genbank:acc:YP_699943;genbank:gi:110804051;genbank:GeneID:4206661 Probab=100.00 E-value=7.5e-79 Score=448.88 Aligned_cols=371 Identities=18% Similarity=0.169 Sum_probs=301.6 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhc-CCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLL-GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~- 80 (392) |-|.+.++++..+.. ..+..+..++. +.++..|+.++|+++++|++||++||++||+||++++++... T Consensus 1 m~f~~~~~~~~~~~~----------~~~~~~~~~~g~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~lp~~~~~~~~~~ 70 (409) T protein:vir:10 1 MLFRKGFKNQSQEIS----------IDDKKILEWLGINPSETYVNGKSCLKQATVFGCIRILSDNISKLPIKIYQKKDGI 70 (409) T ss_pred CcccccccCcCCCCC----------CChHHHHHHhcCCcCcceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCe Confidence 766666655442211 11122233332 345678899999999999999999999999999999875421 Q ss_pred ----------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccc-----eEEE Q lcl|Aclame:pro 81 ----------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN-----GMYY 145 (392) Q Consensus 81 ----------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~-----~~~~ 145 (392) .++.+||++||+++||+.++.+++++||+|++++|+.+|++++|||++|+.|++..+.++. .+.| T Consensus 71 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~~~i~r~~~G~~~~L~~i~~~~V~v~~~~~~~~~~~~~~~y 150 (409) T protein:vir:10 71 KRVPDHYLEYLLKLRPNPYMSSSDFWKCIEVQRNIYGNAYVALDFKKNGEIKGLYPLKSDGMKIFVDDTGLLNSENNVWY 150 (409) T ss_pred eeccCchHHHHHhhccCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCCceEEEEcCCccccccceEEE Confidence 2457999999999999999999999999999999999999999999999999998876543 2233 Q ss_pred EEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH- Q lcl|Aclame:pro 146 NITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD- 224 (392) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~- 224 (392) .++. ..+....+++++|||++++++++ .+|+||+..++.++....++++++.++|+||++|+|++++++..++++ T Consensus 151 ~~~~---~~g~~~~~~~~evih~r~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~~ 226 (409) T protein:vir:10 151 LYTD---DLGQRHKFMSDEILHFKGLTADG-LAGLSVIELLNHLIENGKSSETYLNNFFKNGLQVKGLVQYAGDLNPEAE 226 (409) T ss_pred EEEe---CCceeEEeccccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEcCCCCCHHHH Confidence 3332 23456789999999999988776 679999999999999999999999999999999999999998766553 Q ss_pred -HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc--cchHHHHHH Q lcl|Aclame:pro 225 -KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ--QSSIQQISG 301 (392) Q Consensus 225 -~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~--~~~~~~~~~ 301 (392) +.++.+.+.+.+..|+|+++++++|++|++++.+++|+||+|++++++++||++|||||++||+.+++ .+.+++.++ T Consensus 227 ~~~~~~~~~~~~g~~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~~e~~~~~ 306 (409) T protein:vir:10 227 EVFKENFERMSSGLKNAHRIAMLPIGYKFEPISQKLVDAQFLENSQLTIRQIASVFGVKMHQLNDLDRATHSNITEQNRE 306 (409) T ss_pred HHHHHHHHHHhccccccCCceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHcCCCCCCccccHHHHHHH Confidence 34556777788889999999999999999999999999999999999999999999999999975443 344567899 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccc Q lcl|Aclame:pro 302 MYASALNRYLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDL 373 (392) Q Consensus 302 ~~~~~l~p~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~ 373 (392) |+++||+|+++.|+++|+++|+. +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++..|. T Consensus 307 f~~~~l~P~~~~ie~~ln~kL~~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~lgl~p~~ggD~ 386 (409) T protein:vir:10 307 FYIDTLQSILNMYELEINYKLFLISEIKNGFYSKFNVDTILRADIKTRYESYKEAIQNGFKTPNEIRELEEDEPLEGGDV 386 (409) T ss_pred HHHHHHHHHHHHHHHHHHHhhcCchhccCCcEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCe Confidence 99999999999999999999863 4789999999999999999999999999999999999985555543332 Q ss_pred cc-ccCCCCC--------CCCCC Q lcl|Aclame:pro 374 PA-PENTNKK--------TTGQS 387 (392) Q Consensus 374 ~~-~e~~~~~--------~~gd~ 387 (392) .. .-++.|+ .||+. T Consensus 387 ~~~~~n~~~~~~~~~~~~kgGe~ 409 (409) T protein:vir:10 387 LLINGNMIPVKMAGEQYSKGGEK 409 (409) T ss_pred eeeccCccchhhccccccccCCC Confidence 21 1222222 23333 No 39 >protein:vir:483 Length: 413 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:11 # MgeName: P27 # Cross-refs: genbank:acc:NP_543090;swissprot:trembl:q8w629;genbank:gi:18249902;uniprot:Q8W629;genbank:GeneID:929685 Probab=100.00 E-value=9.5e-79 Score=448.32 Aligned_cols=378 Identities=15% Similarity=0.218 Sum_probs=305.5 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ-- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~-- 80 (392) |-|.++|+++......+. . .....+...+.+.++..|+.+.++++|+|++||++||+++|++|++++++... T Consensus 1 ~~f~~~f~r~~~~~~~~~-~-----~~~~~~~~~~~~~~g~~v~~~~~l~~~~v~~~i~~Ia~~iA~~p~~~~~~~~~~~ 74 (413) T protein:vir:48 1 MFFSGLFQRKSDAPVTTP-A-----ELAEAIGLSYDTYTGKRISSQRAMRLTAVYSCVRVLAESVGMLPCSLYKISGTLK 74 (413) T ss_pred CccchhhccCccCCccch-H-----HHHHhhhcCcccccCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCcc Confidence 777777777554432211 0 01111111223456788999999999999999999999999999999975422 Q ss_pred ----------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEec Q lcl|Aclame:pro 81 ----------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFD 150 (392) Q Consensus 81 ----------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~ 150 (392) .++.+||++||+++||+.++.+++++||+|+++.|+ .|+|++|||++|+.|++..+.++... |.+... T Consensus 75 ~~~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~-~g~~~~L~~l~~~~v~~~~~~~~~~~-y~~~~~ 152 (413) T protein:vir:48 75 TRVVDERLHKLVSAKPNGYMTPQEFWELVIVCLCLRGNFYAYKVKA-LGEVVELLPIDPGCVEPKLNSQWQPV-YQVTFP 152 (413) T ss_pred eeecccHHHHHHHhhccCCCCHHHHHHHHHHHHhhcCceEEEEEeC-CCcEEEEEEEcCceEEEEEcCCceEE-EEEEec Confidence 345689999999999999999999999999999886 69999999999999999988766544 344433 Q ss_pred CcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH--HHHH Q lcl|Aclame:pro 151 DPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KDKA 228 (392) Q Consensus 151 ~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~--~~~~ 228 (392) + +....+++++|||+++++.++ .+|+||+..+..++..+.++.++..++|+||++|+|++++++..++++ +.++ T Consensus 153 ~---g~~~~~~~~evih~~~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~~~~e~~~~~~~ 228 (413) T protein:vir:48 153 D---GSVDVLTQDEIWHVRTLTLDG-LVGLNPIAYAREAISLAAATEEHGARLFGNGAVTSGVLRTEQKLTPDAYERLKK 228 (413) T ss_pred C---ceEEEEccccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHHHH Confidence 2 445689999999999988766 689999999999999999999999999999999999999998776653 4466 Q ss_pred HHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc--chHHHHHHHHHHH Q lcl|Aclame:pro 229 SRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQQISGMYASA 306 (392) Q Consensus 229 ~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~--~~~~~~~~~~~~~ 306 (392) .+.+.+.+..|+|+++++++|++|++++.+++|+||+|++++++++||++|||||++||+.++++ +.+++...|+++| T Consensus 229 ~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~n~e~~~~~f~~~~ 308 (413) T protein:vir:48 229 DFEERHTGLGNAHRPMILEMGLDWKSMALNAEDSQFLETRKFQLEEICRLFRVPLHMVQNTDRATFNNIEELGLGFINYS 308 (413) T ss_pred HHHHHhcCccccCcceecCCCceEEeccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCcCCCcccHHHHHHHHHHHH Confidence 77888889999999999999999999999999999999999999999999999999999754432 3456789999999 Q ss_pred HHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccc-cC Q lcl|Aclame:pro 307 LNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAP-EN 378 (392) Q Consensus 307 l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~-e~ 378 (392) |.|++++|+++|+.+|++ +++||.+.+++.|.+++++.+.+++++|++|+||+|++++..+++..|.... -+ T Consensus 309 i~P~~~~ie~~l~~~L~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p~~ggD~~~~~~n 388 (413) T protein:vir:48 309 LVPYLTRIEQRINTGLVRESKQGKFYAKFNAGALLRGDMKSRFEAYATGINWGIYSPNDCRDLEDMNPRPGGDVYLTPMN 388 (413) T ss_pred HHHHHHHHHHHHHhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeecccc Confidence 999999999999999964 4789999999999999999999999999999999999986665544343221 12 Q ss_pred CCCCCC-CCCCCCCC Q lcl|Aclame:pro 379 TNKKTT-GQSNEPVP 392 (392) Q Consensus 379 ~~~~~~-gd~~~p~p 392 (392) ..+... ++++.+.. T Consensus 389 ~~~~~~~~~~~~~~~ 403 (413) T protein:vir:48 389 MTTSPSAGDDNGKKK 403 (413) T ss_pred ccccccccccCCCCC Confidence 222222 22222222 No 40 >protein:vir:1266 Length: 416 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690758;genbank:gi:22854998;genbank:GeneID:955213 Probab=100.00 E-value=1e-78 Score=448.12 Aligned_cols=377 Identities=17% Similarity=0.211 Sum_probs=302.9 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) |=|-++|+++..... .... ........+......++..|+.++++++|+||+||++||++||+||++++++.. T Consensus 1 m~~~~~f~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~Ia~~ia~l~~~~~~~~~~~~ 76 (416) T protein:vir:12 1 MLLERMFEKRSGSSD---HEDG-FNNILLNMFGGRKTASGERVSESNSLVQPDIFACVNVLSDDIAKLPIHTYKRTDGGI 76 (416) T ss_pred CccchhcccccCccc---cCcc-chhHHHHhhcCcccccCceechhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCcc Confidence 655455555443211 1111 111112222222345678899999999999999999999999999999987542 Q ss_pred ---------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEec Q lcl|Aclame:pro 80 ---------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFD 150 (392) Q Consensus 80 ---------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~ 150 (392) ..++.+||++||+++||+.++.+++++||||+++.|+..|++.+|||++|+.|++..+.+++.+++.+..+ T Consensus 77 ~~~~~~~l~~~l~~~PN~~~t~~~f~~~~v~~lll~Gna~~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~~~~~~~~~ 156 (416) T protein:vir:12 77 ERKPEHKSAHAVYARPNPYMTAFTWKKLMMTHVLTWGNAYSYIQFGSHGYPEALFPLRPDYTNAYVHPTTGMLWYQTVLN 156 (416) T ss_pred ccccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCcceEEEEeCCCcEEEEEEecC Confidence 23567999999999999999999999999999999999999999999999999999998888888777653 Q ss_pred CcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHH Q lcl|Aclame:pro 151 DPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASR 230 (392) Q Consensus 151 ~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~ 230 (392) +..+.+++++|||+++++.++ .+|+||+.+++.++..+.+++++..++|+||++|+|++++++..+++ ..+++ T Consensus 157 ----g~~~~~~~~eiih~~~~~~~~-~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~e--~~~~~ 229 (416) T protein:vir:12 157 ----GKAIELYDYEVLHFKGLSTDG-IHGKSPIGVVREHIGAQAAATKYNAKLYKNEATPRGILKVPAFLDEK--PKENV 229 (416) T ss_pred ----CeEEEecCccEEEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEecCCCCCHH--HHHHH Confidence 356789999999999888776 68999999999999999999999999999999999999998865443 44455 Q ss_pred HHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc-cch-HHHHHHHHHHHHH Q lcl|Aclame:pro 231 SRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ-QSS-IQQISGMYASALN 308 (392) Q Consensus 231 ~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~-~~~-~~~~~~~~~~~l~ 308 (392) .+.+.+..+++++++|++|++|++++++++|+||+|++++++++||++|||||++||+..++ +++ +++..+|+++||. T Consensus 230 ~~~~~~~~~~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~sn~e~~~~~f~~~~l~ 309 (416) T protein:vir:12 230 RKEWKRVNKVENIAIIDYGLEYQSISMPLQEAQFVESMKFNKAQISMIYKVPLHKLNELDKATFSNIEHQSIEYVRNTLQ 309 (416) T ss_pred HHHHHHHhcCCCeeecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhCCccCCCcccHHHHHHHHHHHHHH Confidence 56666677889999999999999999999999999999999999999999999999975443 333 4677899999999 Q ss_pred HHHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccccc-ccCC Q lcl|Aclame:pro 309 RYLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPA-PENT 379 (392) Q Consensus 309 p~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~-~e~~ 379 (392) |++++|+++|+.+|++ +++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++..|.+. .-+. T Consensus 310 P~~~~ie~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~Pi~ggd~~~~~~n~ 389 (416) T protein:vir:12 310 PWIVNFEQELNVKLFLDHDQKSGHYVKFNIDSELRGDSKTQAEYLKTLHETGVLNKDEIRELLERNPIENGDKYISSLNY 389 (416) T ss_pred HHHHHHHHHHHHhhcCchhhcCCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeecccc Confidence 9999999999999863 478999999999999999999999999999999999998655554333211 1111 Q ss_pred CC---------------CCCCCC-CCC Q lcl|Aclame:pro 380 NK---------------KTTGQS-NEP 390 (392) Q Consensus 380 ~~---------------~~~gd~-~~p 390 (392) -+ ..|||. ++- T Consensus 390 ~~~~~~~~~~~~~~~~~~~gge~~~~g 416 (416) T protein:vir:12 390 VFLDFLEEYQRLKAGGAMKGGDNKNEG 416 (416) T ss_pred ccccccchhhccccccccCCCCCcCCC Confidence 11 122222 222 No 41 >protein:vir:8418 Length: 409 # NCBI annotation: gp13 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:155 # MgeName: Omega # Cross-refs: genbank:acc:NP_818314;genbank:gi:29566750;genbank:GeneID:1260067 Probab=100.00 E-value=1.6e-78 Score=447.13 Aligned_cols=378 Identities=16% Similarity=0.208 Sum_probs=295.1 Q ss_pred chhhHhhcccc-cccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc- Q lcl|Aclame:pro 3 LPILNFINQTN-DPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ- 80 (392) Q Consensus 3 Mg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~- 80 (392) ||||++++++. .+........ .+ . .. ......+..++.++|+++++|++||++||++||+||+++++++.. T Consensus 1 Mgl~~~~f~~~~~~~~~~~~~~-~~--~--~~--~~~~~~g~~v~~~~al~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~ 73 (409) T protein:vir:84 1 MSLFTRIFSGPSEERTLTKISG-IP--S--PA--EDWAMHGDRPGANSAMTLGAFYACVTLLADTVASLSIDAYRKKDNV 73 (409) T ss_pred CchhhhhhcCCCcccccccccc-cc--c--cc--chhhccCcccchhhhhccHHHHHHHHHHHHhhhhCceEEEEecCCc Confidence 99998554433 2222111111 00 0 01 111235667899999999999999999999999999999985432 Q ss_pred ---------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEe-eccCCceEEEEEeccccceeeecCccceEEEEEEec Q lcl|Aclame:pro 81 ---------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRW-RNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFD 150 (392) Q Consensus 81 ---------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~-r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~ 150 (392) .++.+||++||+++||+.++.+++++||+|+++. ++..|+|++|||++|+.|++....+....++.+.+. T Consensus 74 ~~~~~~l~~lL~~~PN~~~t~~~f~~~l~~~l~l~Gn~~~~i~~~~~~g~~~~L~~l~p~~v~v~~~~~~~~~~~~~~~~ 153 (409) T protein:vir:84 74 RIPVSPAPKLLESTPYPGLTWFDWLWMLMESLAVTGNAFGYISARDEANRPTAIMPIHPDCIHVTDAKDEDGDWIEPVYR 153 (409) T ss_pred ccccchHHHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEECCCCceEEEEEEcCceeEEEEcCCCcceEEEEEec Confidence 3467999999999999999999999999999886 678899999999999999988766555444444333 Q ss_pred CcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHH Q lcl|Aclame:pro 151 DPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASR 230 (392) Q Consensus 151 ~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~ 230 (392) .. + .++++++|||++++++++..+|+||+..++..+..+.++++++.++|+||++|+|+|++++..++++. .+.+ T Consensus 154 ~~--g--~~~~~~dvih~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~e~~-~~~~ 228 (409) T protein:vir:84 154 ID--G--KVVPNHRIMHIKRYPVAGCALGMSPIEKAASAIGLGLAAERYGLRWFRDSANPSGILSSDADLTPDQV-KQTQ 228 (409) T ss_pred CC--c--eEEchhhEEEecCCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEecCCCCCHHHH-HHHH Confidence 22 2 35889999999999999988999999999999999999999999999999999999999887655432 2222 Q ss_pred HHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---ch-HHHHHHHHHHH Q lcl|Aclame:pro 231 SRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---SS-IQQISGMYASA 306 (392) Q Consensus 231 ~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---~~-~~~~~~~~~~~ 306 (392) .+...+..|+|++++|++|++|++++.+++|+||+|++++++++||++|||||++||..+.++ ++ +++...|+++| T Consensus 229 ~~~~~~~~n~g~~~vl~~g~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~~~sn~e~~~~~f~~~~ 308 (409) T protein:vir:84 229 KQWIQSHHNRRLPAVMSAGIKWQSVSITPNESQFLETRSFQRSEIAMWFRIPPHMIGDVEKSTSWGTGIEEQGINFVRHT 308 (409) T ss_pred HHHHHHhccCCCeeecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCcccccchHHHHHHHHHHHH Confidence 233345567889999999999999999999999999999999999999999999999754433 33 45678999999 Q ss_pred HHHHHHHHHHHHHHHhhh--hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccccc-ccCCCCCC Q lcl|Aclame:pro 307 LNRYLRPAISELEYKLSD--HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPA-PENTNKKT 383 (392) Q Consensus 307 l~p~l~~i~~~l~~~l~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~-~e~~~~~~ 383 (392) |.|+++.|+++|+.+|.. .++||...+++.|.+++++.+..++++|++|+||+|++++..+++..|... .-+..++. T Consensus 309 l~P~~~~ie~~l~~~L~~g~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~p~~ggD~~~~~~n~~~~~ 388 (409) T protein:vir:84 309 LLPWLRCIEQALDTFLPRGQFVKFNVDGLMRGDVTARFTAYQMGLQNGIWSVNEVRAWEDAPPIPEGDIHLQPMNFVPLG 388 (409) T ss_pred HHHHHHHHHHHHHHhccCCCeEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeecccccccc Confidence 999999999999999853 578999999999999999999999999999999999998555543333211 11222221 Q ss_pred CCC----CCCCCC Q lcl|Aclame:pro 384 TGQ----SNEPVP 392 (392) Q Consensus 384 ~gd----~~~p~p 392 (392) ..+ +.+|.| T Consensus 389 ~~~~~~~~~~~~~ 401 (409) T protein:vir:84 389 YVPPEEPAQEPQP 401 (409) T ss_pred cCCccccCcCCCC Confidence 111 122333 No 42 >protein:vir:1431 Length: 419 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:30 # MgeName: phiE125 # Cross-refs: genbank:acc:NP_536360;genbank:gi:17975165;genbank:GeneID:929165 Probab=100.00 E-value=1.4e-78 Score=447.34 Aligned_cols=375 Identities=15% Similarity=0.142 Sum_probs=296.1 Q ss_pred hhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc--- Q lcl|Aclame:pro 4 PILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ--- 80 (392) Q Consensus 4 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~--- 80 (392) =||++......... ..........++....+.++..||.++||++++||+||++||++||++|+++|++..+ T Consensus 1 ~~~~r~~~~~~~~~-----~~~~~~~~~~~~g~~~s~~~~~vt~~~al~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~~~ 75 (419) T protein:vir:14 1 MFFSRQLLSNLGQT-----QMSAGGWVSALLGSSRSDSGQVVTPASALALTVLQNCVTLLAESIAQLPIELYERSGEDRK 75 (419) T ss_pred Cccccccccccccc-----ccCcchhhHHhhcCCCccCCcccchHHhhccHHHHHHHHHHHHhhccCceEEEEecCCccc Confidence 12332222111111 1112222223344444567889999999999999999999999999999999975532 Q ss_pred ---------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecC Q lcl|Aclame:pro 81 ---------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDD 151 (392) Q Consensus 81 ---------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~ 151 (392) .++.+||++||+++||+.++.+++++||+|+++.|+.+|+|++|||++|+.|++..+.++... |.+... T Consensus 76 ~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~l~pl~~~~v~v~~~~~~~~~-y~~~~~- 153 (419) T protein:vir:14 76 PATDHPLYSILKYEPNSWQTPFEYQEQSQVAVGLRGNSYSFIDRDSDGVIQGLYPLDNEAVTVMRGSDLKPV-YRVRGS- 153 (419) T ss_pred cccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCceEEEEECCCceEE-EEEccC- Confidence 345689999999999999999999999999999999999999999999999999887766543 333221 Q ss_pred cceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCc---h---HH Q lcl|Aclame:pro 152 PKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLL---S---DK 225 (392) Q Consensus 152 ~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~---~---~~ 225 (392) ..++.++|+|+++++.++ .+|+||+..++.++..+.+++++..++|+||++|+|+|++++.... + ++ T Consensus 154 ------~~~~~~~i~h~~~~~~dg-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~~~~~~~~~~~~ 226 (419) T protein:vir:14 154 ------DPMPQRLVHHVRWMSING-YTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPKDAPALKDQASVDR 226 (419) T ss_pred ------cccchhheeEecCcCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCcccCHHHHHH Confidence 137889999999988776 6799999999999999999999999999999999999999875431 2 23 Q ss_pred HHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc--cchHHHHHHHH Q lcl|Aclame:pro 226 DKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ--QSSIQQISGMY 303 (392) Q Consensus 226 ~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~--~~~~~~~~~~~ 303 (392) .++.+.+.+.+..|+|++++|++|++|++++.+++|+||+|++++++++||++|||||++||..+++ ++.+++...|+ T Consensus 227 ~~~~~~~~~~g~~nag~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~t~s~~E~~~~~f~ 306 (419) T protein:vir:14 227 ITDGWNAKFGGSGNAKKVALLQEGMTFRPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELERATFSNIEHQSLQFV 306 (419) T ss_pred HHHHHHHHhcCccccCCceecCCCceEEEccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCCCCcccHHHHHHHHH Confidence 4566778888999999999999999999999999999999999999999999999999999965433 23456789999 Q ss_pred HHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccc Q lcl|Aclame:pro 304 ASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAP 376 (392) Q Consensus 304 ~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~ 376 (392) ++||.|+++.|+++|+.+|++ .++||...+++.|.+++++.+..++++|++|+||+|++++..+++..|.... T Consensus 307 ~~~L~P~~~~ie~~l~~kll~~~~~~~~~i~fd~~~l~r~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~p~~gGD~~~~ 386 (419) T protein:vir:14 307 IYTLLPWVKRHEQAKTRDLLLPSERKQYFIEYNLAGLLRGDQSSRYAAYAVGRQWGWLSINDIRRLENMPPVKGGDIYLS 386 (419) T ss_pred HHHHHHHHHHHHHHHhhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeee Confidence 999999999999999999863 3789999999999999999999999999999999999986555543342221 Q ss_pred c-CCCCCCC---CCCCCCCC Q lcl|Aclame:pro 377 E-NTNKKTT---GQSNEPVP 392 (392) Q Consensus 377 e-~~~~~~~---gd~~~p~p 392 (392) . +.-+... .+.+++.| T Consensus 387 ~~n~~~~~~~~~~~~~~~~~ 406 (419) T protein:vir:14 387 PMNMVDASKPQQLPVGKSEP 406 (419) T ss_pred ccccccccccccccCCCCCC Confidence 1 1111111 11122222 No 43 >protein:vir:94666 Length: 723 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1527 # MgeName: mu1/6 # Cross-refs: genbank:acc:YP_579205;genbank:gi:93007441;genbank:GeneID:5076785 Probab=100.00 E-value=3.4e-78 Score=445.31 Aligned_cols=363 Identities=11% Similarity=0.043 Sum_probs=287.6 Q ss_pred cccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc---------ccccccCCccCCHHH Q lcl|Aclame:pro 24 YFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN---------QGIIDNPSTNANKHG 94 (392) Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~---------~~~~~~PN~~~s~~~ 94 (392) .++.......|..++......++.+.++++++||+||++||++||+||+++++++. ..++.+||++||+++ T Consensus 1 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~V~acV~~Ia~~iA~lpl~l~~~~~~~~~~~~l~~lL~~~PN~~~t~~~ 80 (723) T protein:vir:94 1 MTTFPSGAGGWNAWSADSVFGNGAKGWSNSAVAYRCISMLANNAASVDLVVRGPDGELDELHPLSQLWNVMPNRAMPAQV 80 (723) T ss_pred CcccccCCCccccccccccccccHHHHhhhHHHHHHHHHHHHhhccceeEEEcCCCccchhhHHHHHHhhCCCCCCCHHH Confidence 11122223345555566667788899999999999999999999999999997643 234568999999999 Q ss_pred HHHHHHHHHHHhCCeeEEEeec---cCCceEEEEEeccccceeeecCccceE------EEEEEecCcceeeeEEEeceeE Q lcl|Aclame:pro 95 FWQSMFAQLLLGGEAFAYRWRN---ANGADMKWEYLRPSQVNTYYFEYENGM------YYNITFDDPKIEPILQAPQSDL 165 (392) Q Consensus 95 f~~~~~~~l~l~Gn~~~~i~r~---~~G~~~~l~~l~~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~v 165 (392) ||+.++.+|+++||+|+++.|+ ..|.|.+|++++++.+.+....++... .|.++. ..|..+++++++| T Consensus 81 f~~~~~~~lll~Gnay~~i~r~~r~~~g~p~~l~~l~~~~~~v~~~~~~~~~~~~~~~~y~~~~---~~G~~~~~~~~dI 157 (723) T protein:vir:94 81 LKALSMTRLQLDGQCHLWLNYNGRTPAGVPDEIWYVYDRVTTIVATRAADAVPQAQIIGYVIER---TDGVRVPVLADEM 157 (723) T ss_pred HHHHHHHHHhhcCCeEEEEEecCCccccceeEEEEecCcceEEeecCCCccceeeeeeEEEEEe---cCceeEEecccce Confidence 9999999999999999999865 458999999999988877665544322 222222 2355678999999 Q ss_pred EEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch--HHHHHHHHHHHhccccCCce Q lcl|Aclame:pro 166 IHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS--DKDKASRSRSFMKRSRSGGP 243 (392) Q Consensus 166 ih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~ 243 (392) |||+++++.+.++|+||+..++.+|..+.+++++..++|+||++|+|||+.++ ..++ ++.++.|.+.+.|..|+|++ T Consensus 158 iHir~~~~~dg~~G~Spi~~a~~~i~~~~aa~~~~~~~f~NG~~p~giL~~~~-l~~e~~~~~~~~~~~~~~G~~Nagk~ 236 (723) T protein:vir:94 158 LWLRFSDPYDPLAVMAPWKAARAAVDADFYAATWQRQSFKNGARPGGVVNLGD-MDEQTFTKTVAAFRSQVEGVQNAGRH 236 (723) T ss_pred EEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEcCC-CCHHHHHHHHHHHHHHhhchhhcCcc Confidence 99998877677889999999999999999999999999999999999999864 3333 24456778888999999999 Q ss_pred eecc----------CCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 244 VVLD----------DLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRP 313 (392) Q Consensus 244 ~vl~----------~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~ 313 (392) +||+ +|++|++++++++|+||+|++++++++||++|||||++|++.++.+|..++...|+.+||.|+++. T Consensus 237 ~vL~g~~~~~~vl~~G~~~~~l~~s~~D~q~le~r~~~~~eIa~afgVPp~~i~~~st~sN~e~~~~~f~~~tL~P~~~~ 316 (723) T protein:vir:94 237 LLIAGQGSDGGAAGKGATFTSLSMSPAEMDYINSRMHSAEEVMLAFGIRKDALLGGSTYENQAEAKAAVWTETLIPQMEV 316 (723) T ss_pred eeecccccccccccCCceEEEccCCHHHHHHHHHHHHhHHHHHHHhCCChhHcCCCCCcccHHHHHHHHHHHHHHHHHHH Confidence 9985 599999999999999999999999999999999999999876555555677889999999999999 Q ss_pred HHHHHHHHhhhh------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc-cccccCC-CCCCCC Q lcl|Aclame:pro 314 AISELEYKLSDH------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD-LPAPENT-NKKTTG 385 (392) Q Consensus 314 i~~~l~~~l~~~------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e-~~~~e~~-~~~~~g 385 (392) |+++|+.+|++. ++||...+++.|.+++++.+..++++|++|+||+|++++..+++.++ .....+. ..+.+ T Consensus 317 ie~~ln~~Ll~~~g~~~~~~f~~~~lLr~D~~~r~~~~~~~v~~G~~T~NE~R~~lglpPi~gGd~~~~~~p~~~~~a~- 395 (723) T protein:vir:94 317 MASITDLQLLPDIGWTVEWDFNSVPALQEDLEAQAGRNQGYLVNDVLMVDEVRATIGLDPLPGGIGQMTLTPYRAQFAP- 395 (723) T ss_pred HHHHHhHhhcccccCceEEeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCcccceeccccccccC- Confidence 999999999754 44566667889999999999999999999999999998554444322 1101100 00111 Q ss_pred CCCCCCC Q lcl|Aclame:pro 386 QSNEPVP 392 (392) Q Consensus 386 d~~~p~p 392 (392) +..|.| T Consensus 396 -~~~~~p 401 (723) T protein:vir:94 396 -APAPAP 401 (723) T ss_pred -CCCCCc Confidence 112222 No 44 >protein:vir:80333 Length: 419 # NCBI annotation: gp4, phage portal protein, HK97 family # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1881 # MgeName: phi644-2 # Cross-refs: genbank:acc:YP_001111083;genbank:gi:134288632;genbank:GeneID:4960580 Probab=100.00 E-value=1e-77 Score=442.73 Aligned_cols=374 Identities=14% Similarity=0.134 Sum_probs=296.8 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ-- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~-- 80 (392) |-|.++..+... +..+ ........++....+.++..|++++||++++||+||++||++||+||+++|++..+ T Consensus 1 m~~~~~~~~~~~-~~~~-----~~~~~~~~~~g~~~s~~~~~v~~~~al~~~~v~~cv~~ia~~ia~lp~~~~~~~~~~~ 74 (419) T protein:vir:80 1 MFFSRQLLSNLG-QTQP-----GSGGWVSALLGSARSEAGQVVTPASALSLTVLQNCVTLLAESIAQLPVELYERSGDDR 74 (419) T ss_pred CCcccccccccC-cCCC-----CcchhhHHhhcccccccCcccChHHhhccHHHHHHHHHHHHhhccCceEEEEecCCCc Confidence 544444333221 1111 11111222333334456789999999999999999999999999999999975432 Q ss_pred ----------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEec Q lcl|Aclame:pro 81 ----------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFD 150 (392) Q Consensus 81 ----------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~ 150 (392) .++.+||++||+++||+.++.+++++||+|+++.|+.+|+|.+|||++|+.|++..+.++...| .+. T Consensus 75 ~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~~i~~~~v~i~~~~~~~~~y-~~~-- 151 (419) T protein:vir:80 75 KPATDHPLYSILKYEPNPWQTPFEYQEQSQVAVGLRGNSYSFIDRDQDGVIQGLYPLDNEAVTVMKGPDLKPMY-RVA-- 151 (419) T ss_pred ccccccHHHHHHHhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEecCceEEEEECCCceEEE-EEc-- Confidence 2456999999999999999999999999999999999999999999999999999887655433 222 Q ss_pred CcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCC---ch---H Q lcl|Aclame:pro 151 DPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGL---LS---D 224 (392) Q Consensus 151 ~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~---~~---~ 224 (392) + ...+++++|+|+++++.++ .+|+||+..++.+|..+.+++++..++|+||++|+|+|++++... .+ + T Consensus 152 ~-----~~~~~~~~i~h~~~~~~d~-~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~~~~~~~~~~~~ 225 (419) T protein:vir:80 152 G-----ADPLPQRLVHHVRWMSING-YTGLSPVLLHANAIGHAQAIQQYAGKSFMNGTALSGVIERPTDAPALKDQASVD 225 (419) T ss_pred C-----ccccchhheEEecCCCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEecCCCCcccCHHHHH Confidence 1 1248899999999988776 679999999999999999999999999999999999999876432 12 2 Q ss_pred HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc--chHHHHHHH Q lcl|Aclame:pro 225 KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQQISGM 302 (392) Q Consensus 225 ~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~--~~~~~~~~~ 302 (392) +.++.+.+.+.+..|+|++++|++|++|++++.+++|+||+|++++++++||++|||||++||+.++++ +.+++...| T Consensus 226 ~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~s~~d~q~~e~~~~~~~~Ia~~fgVPp~llg~~~~~t~~n~e~~~~~f 305 (419) T protein:vir:80 226 RITDGWNAKFGGSGNAKKVALLQEGMKFKPLSMTNVDAALIDALRLSALDIARIYKIPAHMVNELERATFSNIEHQSLQF 305 (419) T ss_pred HHHHHHHHHhcCccccCCceecCCCceEEeccCChhhHHHHHHHHHHHHHHHHHhCCCHHHhcCCCCCCcccHHHHHHHH Confidence 345667788889999999999999999999999999999999999999999999999999999754433 345678899 Q ss_pred HHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccccc Q lcl|Aclame:pro 303 YASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPA 375 (392) Q Consensus 303 ~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~ 375 (392) +++||.|+++.|+++|+.+|++ .++||.+.+++.|.+++++.+..++++|++|+||+|++++..+++..|... T Consensus 306 ~~~~l~P~~~~ie~~l~~kll~~~~~~~~~i~fd~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~gGD~~~ 385 (419) T protein:vir:80 306 VIYTLLPWVKRHEQAKTRDLLLPSERKQYFIEYNLAGLLRGDQSSRYAAYAVGRQWGWLSINDIRRLENMPPVKGGDIYL 385 (419) T ss_pred HHHHHHHHHHHHHHHHhhhccCccccCCeEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceee Confidence 9999999999999999999864 378999999999999999999999999999999999998555554333221 Q ss_pred ccCCCCC-----CCCCCCCCCC Q lcl|Aclame:pro 376 PENTNKK-----TTGQSNEPVP 392 (392) Q Consensus 376 ~e~~~~~-----~~gd~~~p~p 392 (392) . +++-. ...+.+++.| T Consensus 386 ~-~~n~~~~~~~~~~~~~~~~~ 406 (419) T protein:vir:80 386 S-PMNMVDASKPQPIPMGKTEP 406 (419) T ss_pred e-ccccccccccccccCCCCCc Confidence 1 11111 1112233444 No 45 >protein:vir:81218 Length: 423 # NCBI annotation: gp3, phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1893 # MgeName: BFK20 # Cross-refs: genbank:acc:YP_001456733;genbank:gi:157168376;interpro:IPR006427;interpro:IPR006944;uniprot:Q9MBK2;genbank:GeneID:5580341 Probab=100.00 E-value=2.1e-77 Score=440.90 Aligned_cols=383 Identities=15% Similarity=0.119 Sum_probs=293.7 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ-- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~-- 80 (392) ||||++++.+..... +.... ... ..+.....+.+...++...++++|+|++||++||++||+||+++|++..+ T Consensus 1 Mg~~~~~~~~~~~~~--~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~ia~~ia~lp~~~~~~~~dg~ 75 (423) T protein:vir:81 1 MGFLQKLGLAPSVVA--TPEPI--ELV-GPIFESLKLSTKNMTVEQIWEDQPHLRTVTTFIARNVASLQLQAFERVEDGG 75 (423) T ss_pred CchhHhhcccccccc--Ccccc--ccc-cccccccccccchhhHHHHHHhhhHHHHHHHHHHHhHhhCceEEEEEecCCc Confidence 999999865443221 11111 000 11122222222223445566789999999999999999999999875422 Q ss_pred ----------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeecc--CCceEEEEEeccccceeeecCcc-ceEEEEE Q lcl|Aclame:pro 81 ----------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNA--NGADMKWEYLRPSQVNTYYFEYE-NGMYYNI 147 (392) Q Consensus 81 ----------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~--~G~~~~l~~l~~~~v~~~~~~~~-~~~~~~~ 147 (392) .++.+||++||+++||+.++.+++++||+|+++.|+. .+.+..|+|+++..+++....++ +.+.|.+ T Consensus 76 ~~~~~~~~~~~ll~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~rd~~~~~~~~~l~p~~~~~v~~~~~~~~~~~~~Y~~ 155 (423) T protein:vir:81 76 RERVREGHLARVCKLANSDMTMYDLLERTMFDLCLYDEFFWLLPGDLGVDTPTLDIRPIPVSWVQRRAYKDGWGSLDYII 155 (423) T ss_pred eeeeccchHHHHhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCcCcceEEEeecccceeeeeeccCCCcceEEEE Confidence 2467999999999999999999999999999999875 35677888888888887665544 4555555 Q ss_pred EecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC-----Cc Q lcl|Aclame:pro 148 TFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG-----LL 222 (392) Q Consensus 148 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~-----~~ 222 (392) .......+..+.+++++|||++.+++++..+|+||+..++.++..+.+++++..++|+||++|+|+|++++.. ++ T Consensus 156 ~~~~~~~g~~~~~~~~evih~r~~~~~~~~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gvi~~~~~~~~~~l~~ 235 (423) T protein:vir:81 156 IESGDNDGRSVKVPGERVIHRHGYNPKTMKRGKSPVQSLRDILGEQIEAAIFRAQMWRNGPRPGMVIMRDPESKAGKWDA 235 (423) T ss_pred EEecCCCceEEEEcccceEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcccCccCCH Confidence 5555556778899999999999999999889999999999999999999999999999999999999987532 22 Q ss_pred hH--HHHHHHHHHH-hccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-ch-HH Q lcl|Aclame:pro 223 SD--KDKASRSRSF-MKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-SS-IQ 297 (392) Q Consensus 223 ~~--~~~~~~~~~~-~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-~~-~~ 297 (392) ++ +.++.+.+.+ .+..|+|++++|++|++|++++++++|+||+|++++++++||++|||||++||..++++ ++ ++ T Consensus 236 e~~~~~~~~~~~~~~~~~~n~g~~~vl~~g~~~~~l~~s~~d~q~~e~~~~~~~eIa~~fgVPp~~lg~~~~~t~sn~e~ 315 (423) T protein:vir:81 236 ESRTRFMANLRASFSPKSSDVGGTLLLEDGMKAENFHTTSKDEQTVETTKLSLQTVAQVYGINPTMVGQLDNANYSNVRE 315 (423) T ss_pred HHHHHHHHHHHHHhccccccCCcceecCCCceEEeccCChhhHHHHHHHHhhHHHHHHHhCCCHHHhcCCCCCCcccHHH Confidence 21 2344555565 46788999999999999999999999999999999999999999999999999754443 33 56 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhh---------hcccchhhhhcchHHHHHHHHHHHh-CCCcCHHHHHHHHHhCC Q lcl|Aclame:pro 298 QISGMYASALNRYLRPAISELEYKLSDH---------ISVNMRPAIDPLGDNYLSTISTATR-WGALAENQATFVLQEAG 367 (392) Q Consensus 298 ~~~~~~~~~l~p~l~~i~~~l~~~l~~~---------~~~d~~~~~~~~~~~~~~~~~~~~~-~g~~T~nE~R~~l~~~g 367 (392) +.+.|+++||+|+++.|+++|+.+|++. ++||.+.+++.|.+++++.+..++. .|++|+||+|++++..+ T Consensus 316 ~~~~f~~~~L~P~~~~ie~~l~~~L~~~~~~~~~~~~~~fd~~~llr~d~~~r~~~~~~~l~~~G~~T~NE~R~~~gl~p 395 (423) T protein:vir:81 316 FRKALYGDNLGSWIRIIQDVMNLFLLPRVGIDNEKFYFEFNLEEKLRASFEEAAEIKRAAVGNVAWMTINEVRAMDNLPS 395 (423) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCccccccCccEEEecchhhhccCHHHHHHHHHHHHhCCCCcCHHHHHHHhCCCC Confidence 7889999999999999999999999742 6788899999999999999998874 69999999999885444 Q ss_pred CCccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 368 YIPKDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 368 ~~~~e~~~~e~~~~~~~gd~~~p~p 392 (392) ++..|.. .-.++.. .++++++.- T Consensus 396 ~~gGD~~-~~p~n~~-~~~~~~~~~ 418 (423) T protein:vir:81 396 IDGGDDL-ARPLNTE-FGDSEDAPG 418 (423) T ss_pred CCCccee-ecccccc-cCccCCCCC Confidence 4333322 1112211 123222211 No 46 >protein:vir:8317 Length: 409 # NCBI annotation: gp34 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:154 # MgeName: Corndog # Cross-refs: genbank:acc:NP_817885;genbank:gi:29566318;genbank:GeneID:1259513 Probab=100.00 E-value=1.7e-77 Score=441.45 Aligned_cols=364 Identities=14% Similarity=0.094 Sum_probs=288.5 Q ss_pred chhhHhhcccccccccc--------------------------cccccc-cccchhhhhhhhcCCCCcccchhhhhcchH Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVG--------------------------SVQSYF-PDGNDAQIMESLLGDNNEWVSARAALRNSD 55 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~--------------------------~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~ 55 (392) |||++.++.....+..+ ....+. ...........+...++..++.+.++++++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~t~~~~~~~~~ 80 (409) T protein:vir:83 1 MGFWSNLFGIPSIPDLPNDNGPVDYNPGDPDMVEFRGPEEEPEARALPWIRPTAWSGYPESWATPSWGSAQDKLRTLIDV 80 (409) T ss_pred CchhhhhcccccCCCcccccccccccCCCCceeeccCCCcchhhhhcccccccccccccccccccCccccchhhHhhhHH Confidence 99998777642111110 000000 000111111223345678899999999999 Q ss_pred HHHHHHHHHHhhhhCceeeecccc------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEE-eeccCCceEEEEEec Q lcl|Aclame:pro 56 LFSIILQLSSDLAIVKINAEKKKN------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYR-WRNANGADMKWEYLR 128 (392) Q Consensus 56 v~~~i~~ia~~ia~~p~~~~~~~~------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i-~r~~~G~~~~l~~l~ 128 (392) ||+||++||++||+||++++++.. ..++.+||++||+++||+.++.+|++ ||+|+++ .|+.+|+|++|+||+ T Consensus 81 v~acV~~Ia~~iA~lpl~~~~~~~~~~~~~~ll~~~PN~~~t~~~f~~~l~~~lll-Gnay~~~i~r~~~G~~~~L~pl~ 159 (409) T protein:vir:83 81 AWACIDLNASVLSSMPIYRMRNGRIIDSVAWMSNPDPEVYTSWQEFAKQLFWDFQL-GEAFVLPMAHGSDGYPIRFRVVP 159 (409) T ss_pred HHHHHHHHHHhhccCceEEeeCCccccchhhhcccCCCCCCCHHHHHHHHHHHHhh-CCcEEEEEEECCCCcEEEEEEEC Confidence 999999999999999999997532 34567999999999999999999987 9999875 588999999999999 Q ss_pred cccceeeecCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCC Q lcl|Aclame:pro 129 PSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSL 208 (392) Q Consensus 129 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~ 208 (392) |+.|++..+.++. ++|.+. . ...+++|||++++++.+..+|+||+..++..+.++.+++++..++|+||+ T Consensus 160 p~~v~v~~~~~g~-~~y~~~--~-------~~~~~eiiHir~~~~~~~~~G~spi~~~~~~i~~~~a~~~~~~~~f~nga 229 (409) T protein:vir:83 160 PWLVNVELKKGAR-REYRIG--G-------LNVTDEILHIRYQGNTADAHGHGPLESAAPRQVVIGLLQKYVQNLAETGG 229 (409) T ss_pred CcceEEEEcCCce-EEEEEc--c-------ccCccceEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCC Confidence 9999998887653 333332 1 23458999999988777788999999999999999999999999999999 Q ss_pred CcceEEEeCCCCCchHHH--HHHHHHHHhccccCCceeeccCCceE-eecccChhhHHHHHHHHHHHHHHHHHhcccHHH Q lcl|Aclame:pro 209 NVPGVLTVKGGGLLSDKD--KASRSRSFMKRSRSGGPVVLDDLEEF-TALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSY 285 (392) Q Consensus 209 ~~~~il~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~vl~~g~~~-~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~ 285 (392) +|+|++++++..++++.+ +++|.+.+ ..|+|++++|++|+++ ++++++++|+||+|++++++++||++|||||++ T Consensus 230 ~p~gil~~~~~ls~e~~~~~~~~~~~~~--~~nag~~~il~~g~~~~~~~~~s~~d~q~le~r~~~~~eIa~~fgVPp~l 307 (409) T protein:vir:83 230 VPLYWLGVERRLSETEAVDLMDRWIESR--SKYAGHPALVTGGATLNQAKSMSAQDLSLMELTQFNEARIAILLGVPPFL 307 (409) T ss_pred CcceEeecCCCCCHHHHHHHHHHHHHhh--CCccCccceecCCcccccccCCCHHHHHHHHHHHhhHHHHHHHhCCCHHH Confidence 999999999887766433 34444433 4588999999999987 579999999999999999999999999999999 Q ss_pred cCCcccc----cch-HHHHHHHHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhcchHHHHHHHHHHHhCCCcCHH Q lcl|Aclame:pro 286 IGGQGDQ----QSS-IQQISGMYASALNRYLRPAISELEYKLSD---HISVNMRPAIDPLGDNYLSTISTATRWGALAEN 357 (392) Q Consensus 286 lg~~~~~----~~~-~~~~~~~~~~~l~p~l~~i~~~l~~~l~~---~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~n 357 (392) ||..++. ++| +++..+|++.||.|+++.|+++|+.+|++ +++||.+.+++.|.+++++.+..++++|++|+| T Consensus 308 lg~~~~~~~~tysn~eq~~~~f~~~tL~P~~~~ie~~l~~~Ll~~~~~~~f~~~~llr~d~~~r~~~~~~~~~~G~lT~N 387 (409) T protein:vir:83 308 VGLPGATGSLTYSNIEQLFSFHDRSSLRPKATAVMAALDRWALPSPQHLELNRDDYTRPSLVERATAYKIMIEAGVMEPN 387 (409) T ss_pred ccCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEeehhhhhccCHHHHHHHHHHHHhCCCcCHH Confidence 9964332 244 56788999999999999999999999964 589999999999999999999999999999999 Q ss_pred HHHHHHHhCCCCccccccccCCCCCCCCCC Q lcl|Aclame:pro 358 QATFVLQEAGYIPKDLPAPENTNKKTTGQS 387 (392) Q Consensus 358 E~R~~l~~~g~~~~e~~~~e~~~~~~~gd~ 387 (392) |+|+++ |++| .++.+.+++||= T Consensus 388 E~R~~~---glpp-----~~ggd~l~~~gv 409 (409) T protein:vir:83 388 EARAME---RLHS-----EAAAVRLSGGGV 409 (409) T ss_pred HHHHHh---CCCC-----CCCCcccCCCCC Confidence 999976 4333 224444444443 No 47 >protein:vir:100187 Length: 385 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1524 # MgeName: phi AT3 # Cross-refs: genbank:acc:YP_025029;genbank:gi:48697262;genbank:GeneID:2948285 Probab=100.00 E-value=5.2e-77 Score=438.81 Aligned_cols=373 Identities=23% Similarity=0.390 Sum_probs=303.8 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhh-cCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESL-LGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQG 81 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~ 81 (392) ||||+++............. ....++..+ .+..+..|+.++|+++++|++||++||++||++|++++++..+. T Consensus 1 Mg~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~ia~~p~~v~~~~~~~ 74 (385) T protein:vir:10 1 MGLLTPRNFNKRKAKNMVYP------SNPAFFTTTVGGMQLSYVSALSALQNTNVYSVINRIASDVASAHFKTENTATLN 74 (385) T ss_pred Cccccchhcccccccccccc------cchhhhhhhccccCccccCHHHhhccHHHHHHHHHHHHHHhhCceeeeccchhh Confidence 99998764332222211111 112223333 33445678999999999999999999999999999999999999 Q ss_pred ccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcceeeeEEEe Q lcl|Aclame:pro 82 IIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAP 161 (392) Q Consensus 82 ~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (392) ++.+||++||+++||+.++.+++++||+|++++|+ +.+++|+++..|++..+. +..++.+... .++..++++ T Consensus 75 ll~~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~r~----~~~~~p~~~~~v~~~~~~--~~~~~~~~~~--~~~~~~~~~ 146 (385) T protein:vir:10 75 RLESPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ----NLEHIPNSDVQINYLPGN--MGIVYTVLES--NDRPQMVLR 146 (385) T ss_pred hhhcCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC----ceeEeecCCceEEEEEcC--CceEEEEEEc--CCceEEEEc Confidence 99999999999999999999999999999999875 467888888777766543 3444444443 235567899 Q ss_pred ceeEEEecCCCccc--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH---HHHHHHHHHHhc Q lcl|Aclame:pro 162 QSDLIHMKLLSIDG--GKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD---KDKASRSRSFMK 236 (392) Q Consensus 162 ~~~vih~~~~~~~~--~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~---~~~~~~~~~~~~ 236 (392) +++|||+++.++++ ..+|+||+..++.++..+.+++++..++|+||++|+|++++++...+++ +.++.+.+. .+ T Consensus 147 ~~eiihik~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~gil~~~~~~~~~e~~~~~~~~~~~~-~~ 225 (385) T protein:vir:10 147 QDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKDLESAREEFEKA-NT 225 (385) T ss_pred cccEEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHHHHHHHHH-hC Confidence 99999999876543 5689999999999999999999999999999999999999997665432 223444444 44 Q ss_pred cccCCceeeccCCceEeecccChhhHHHH-HHHHHHHHHHHHHhcccHHHcCCccc---ccchHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 237 RSRSGGPVVLDDLEEFTALEIKSNVAQLL-SQTDWTSKQYAKVYGLPDSYIGGQGD---QQSSIQQISGMYASALNRYLR 312 (392) Q Consensus 237 ~~~~g~~~vl~~g~~~~~l~~~~~d~~~~-e~~~~~~~~Ia~~fgVP~~~lg~~~~---~~~~~~~~~~~~~~~l~p~l~ 312 (392) ..|+|+++++++|++|++++.++.|+|++ |.+++++++||++|||||++||+... .+++.++...++..||.|+++ T Consensus 226 ~~n~~~~~vl~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~~fgVp~~~lg~~~~~~~~~sn~eq~~~~~~~~l~P~~~ 305 (385) T protein:vir:10 226 GDNSGRLMVLPDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHSNIDQIKATYLANLNSYVN 305 (385) T ss_pred ccccCCccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCcccccHHHHHHHHHHHHHHHHH Confidence 57899999999999999999999999975 99999999999999999999986432 235667778888899999999 Q ss_pred HHHHHHHHHhh-hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccc-ccccCCCCCCCCCCCCC Q lcl|Aclame:pro 313 PAISELEYKLS-DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDL-PAPENTNKKTTGQSNEP 390 (392) Q Consensus 313 ~i~~~l~~~l~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~-~~~e~~~~~~~gd~~~p 390 (392) .|+++++.+|+ .+++||...+++.|.+++++.+.+++++|++|+||+|++++..|+++.+. ......+..++||+++= T Consensus 306 ~ie~~l~~~l~~~~~~f~~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~p~~~~~~~~~~~~~~~~g~~~dn 385 (385) T protein:vir:10 306 PIVDELRLKMNAPDLELDIKDMLDVDDSALINQVSNLAKSGVLGAEQAQFILTRSGFLPDNLPEFKPLTTQVKGGDEGDN 385 (385) T ss_pred HHHHHHHHhhCCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCccCCCCCccccCcccccCCCCCCCC Confidence 99999999986 57999999999999999999999999999999999999999999887553 33445667778777666 No 48 >protein:vir:3868 Length: 417 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:82 # MgeName: A2 # Cross-refs: genbank:acc:NP_680485;swissprot:trembl:q8ltc2;genbank:gi:22296525;interpro:IPR006427;interpro:IPR006944;uniprot:Q8LTC2;genbank:GeneID:951699 Probab=100.00 E-value=3.9e-77 Score=439.49 Aligned_cols=370 Identities=20% Similarity=0.237 Sum_probs=280.7 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ-- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~-- 80 (392) |+||+.+....++..... ....... .+..|. ++..+||++++||+||++||++||++|++++++..+ T Consensus 1 m~~~~~~~~~~~~~~~~~-------~~~~~~~---~~~~g~-~~~~~Al~~~~V~~cv~~ia~~iA~lp~~~~~~~~~~~ 69 (417) T protein:vir:38 1 MKLFRGLATEVDPHWADH-------LLDSGVI---PSFRGG-YLGISALRNSDVLTAVSIVSGDVSRFPLVITDSSTDEV 69 (417) T ss_pred CccccccccCCCccchhh-------hcccccc---cccCCc-eechhhcccHHHHHHHHHHHHhhccCeeEEEEcCCcce Confidence 888754332222111000 0111111 112222 445689999999999999999999999999876432 Q ss_pred --------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC-CceEEEEEeccccceeeecCccceEEEEEEecC Q lcl|Aclame:pro 81 --------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN-GADMKWEYLRPSQVNTYYFEYENGMYYNITFDD 151 (392) Q Consensus 81 --------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~-G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~ 151 (392) .++.+||++||+++||+.++.+++++||+|++++|+.. |.|..|+|++|+.|++...+.+... |.+...+ T Consensus 70 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~y~~i~r~~~g~~~~~l~~l~p~~v~v~~~~~~~~~-y~~~~~~ 148 (417) T protein:vir:38 70 IDLANIEYLMNTKVNKRLSAYQWKFPMMVNAILTGNAYSRIVRDPITNEPAMFEFYAPSQTQVDTSDPDNII-YRFTPYN 148 (417) T ss_pred eccchHHHHHhcccCcCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCEEEEEEEeCCceEEEEEcCCCeEE-EEEEEcC Confidence 34578999999999999999999999999999999864 6799999999999999877655444 4444333 Q ss_pred cceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH--HHHHH Q lcl|Aclame:pro 152 PKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KDKAS 229 (392) Q Consensus 152 ~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~--~~~~~ 229 (392) ++....+++++|||+++++.++ ++|+||+.+++.+|..+.+++++..++|+||++|+|+++.++..++++ +.++. T Consensus 149 --~~~~~~~~~~dviH~r~~~~d~-~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~p~~il~~~~~l~~e~~~~~~~~ 225 (417) T protein:vir:38 149 --SSMQKVCGFEDVIHWKFFSYDT-IMGRSPLLSLGDEIGLQESGVSTLQKFFKSGLKGSIIKAKESRLSAEARQKIRED 225 (417) T ss_pred --CcEEEEecCcceEEecCCCCCC-ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCCHHHHHHHHHH Confidence 3455678999999999987766 679999999999999999999999999999999999999998776654 33455 Q ss_pred HHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 RSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNR 309 (392) Q Consensus 230 ~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p 309 (392) +.+.+.+ .|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||..+++.+.+++..+|+++||.| T Consensus 226 ~~~~~~g-~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~~fgVPp~~lg~~~~~s~~e~~~~~~~~~tl~P 304 (417) T protein:vir:38 226 FERAQAG-ADAGSPIIVDATMDYQPLEVDTNVLNLINSNNYSTAQIAKALRVPAYRLAQNSPNQSVKQLADDYIRNDLPF 304 (417) T ss_pred HHHHhcc-cccCCceeccCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHhCCCCcchhHHHHHHHHHHHHHHH Confidence 5555555 589999999999999999999999999999999999999999999999997666556677889999999999 Q ss_pred HHHHHHHHHHHHhhhh-------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccc-ccccCCC- Q lcl|Aclame:pro 310 YLRPAISELEYKLSDH-------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDL-PAPENTN- 380 (392) Q Consensus 310 ~l~~i~~~l~~~l~~~-------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~-~~~e~~~- 380 (392) ++++|+++|+.+|++. ++||...+. ......+.+++++|++|+||+|++++..+++..+. ....+++ T Consensus 305 ~~~~ie~~l~~~Ll~~~~~~~~~~~fd~~~l~----~~~~~~~~~~~~~G~~T~NE~R~~~gl~pi~~g~~d~~~~~~n~ 380 (417) T protein:vir:38 305 YFEPITSEFELKLLDDAQRHQYCIGFDTKSVN----GLPIADVNTAVNGGLWTGNEGRAELGKKPLKDPNMDRIQSTLNT 380 (417) T ss_pred HHHHHHHHHHhhhcChhhcccceEEechhhhh----HHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeeecccc Confidence 9999999999999753 455544332 22345577899999999999999985555543221 1111111 Q ss_pred ---------------CCCCCCCCCCCC Q lcl|Aclame:pro 381 ---------------KKTTGQSNEPVP 392 (392) Q Consensus 381 ---------------~~~~gd~~~p~p 392 (392) ...|||.+..-. T Consensus 381 ~~~d~~~~~~~~~~~~~kgg~~~~~~~ 407 (417) T protein:vir:38 381 VFLDQKEAYQAEHAAELKGGDTNAKGN 407 (417) T ss_pred cccccccccccccccccCCCCCCCCCC Confidence 112333322211 No 49 >protein:vir:2683 Length: 412 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:57 # MgeName: phiSLT # Cross-refs: genbank:acc:NP_075502;genbank:gi:12719431;genbank:GeneID:920150 Probab=100.00 E-value=8.4e-77 Score=437.67 Aligned_cols=379 Identities=15% Similarity=0.104 Sum_probs=295.1 Q ss_pred chhhHh--hccccccc-ccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc Q lcl|Aclame:pro 3 LPILNF--INQTNDPP-EVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN 79 (392) Q Consensus 3 Mg~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~ 79 (392) |.||+. +.++.++. ............. .+..+.+.++..++.++++++|+|++||++||++||++|++++++.. T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~iA~lp~~~~~~~~ 77 (412) T protein:vir:26 1 MNVIAKENIVTRIKKKLIDNWIDQSTSKLY---DFSPWKNRSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYK 77 (412) T ss_pred CccchhhhhhhhhhhhHhhhhhcccccccc---cccccCCccccccchhhhhccHHHHHHHHHHHHhHhhCceeEeeccc Confidence 988843 32222222 1122222221111 13334445667789999999999999999999999999999987653 Q ss_pred -------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCc Q lcl|Aclame:pro 80 -------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDP 152 (392) Q Consensus 80 -------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 152 (392) ..++.+||++||+++||+.++.+|+++||+|+++.|+.+|++.+|+|++|+.|++..+.+++.++|.+...+ T Consensus 78 ~~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~- 156 (412) T protein:vir:26 78 VVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAAT- 156 (412) T ss_pred cccchHHHHHHhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcCC- Confidence 235679999999999999999999999999999999999999999999999999999988888877665443 Q ss_pred ceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHH--HHHHH Q lcl|Aclame:pro 153 KIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDK--DKASR 230 (392) Q Consensus 153 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~--~~~~~ 230 (392) +..+.+++++|||+++++..+..+|+||+.+++..+.++.+++++. ++.++..++++++.++..++++. .++.+ T Consensus 157 --g~~~~~~~~evih~~~~~~~~~~~G~s~i~~~~~~i~~~~a~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~ 232 (412) T protein:vir:26 157 --GNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQVLEDF 232 (412) T ss_pred --ceEEEEccccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecCCCCCHHHHHHHHHHH Confidence 4567899999999999877777899999999999999999998884 66666667778887776655532 23333 Q ss_pred HHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc-c-chHHHHHHHHHHHHH Q lcl|Aclame:pro 231 SRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ-Q-SSIQQISGMYASALN 308 (392) Q Consensus 231 ~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~-~-~~~~~~~~~~~~~l~ 308 (392) .+. ..++|++++|++|++|++++++++|+||+|++++++++||++|||||++||+.+++ . +.+++.+.|+++||. T Consensus 233 ~~~---~~~~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~sn~e~~~~~f~~~~l~ 309 (412) T protein:vir:26 233 KQY---YEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLL 309 (412) T ss_pred HHH---hhcCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHH Confidence 332 34678899999999999999999999999999999999999999999999975443 2 345677899999999 Q ss_pred HHHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccc-cCC Q lcl|Aclame:pro 309 RYLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAP-ENT 379 (392) Q Consensus 309 p~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~-e~~ 379 (392) |++..|+++|+++|++ .++||...+++.|.+++++.+..++++|++|+||+|++++..+++..|.... -++ T Consensus 310 P~~~~ie~~ln~kLl~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl~p~~ggD~~~~~~n~ 389 (412) T protein:vir:26 310 PIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDL 389 (412) T ss_pred HHHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeecccc Confidence 9999999999999863 3789999999999999999999999999999999999986555543332221 122 Q ss_pred CC----------CCCCCCCCCCC Q lcl|Aclame:pro 380 NK----------KTTGQSNEPVP 392 (392) Q Consensus 380 ~~----------~~~gd~~~p~p 392 (392) .| ..||+.|+=-= T Consensus 390 ~~~~~~~~~~~~~~gG~~n~~e~ 412 (412) T protein:vir:26 390 YPIDTPLELRKSLKGGDKNVNES 412 (412) T ss_pred cccccchhhcccccCCCCCcCCC Confidence 22 23332211111 No 50 >protein:vir:8100 Length: 466 # NCBI annotation: gp4 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:152 # MgeName: Che9c # Cross-refs: genbank:acc:NP_817681;genbank:gi:29566112;genbank:GeneID:1259306 Probab=100.00 E-value=1.3e-76 Score=436.53 Aligned_cols=389 Identities=12% Similarity=0.056 Sum_probs=298.9 Q ss_pred chhhHhhcccccccccccccc--------------cccccchhhhhhhhc-------CCCCcccchhhhhcchHHHHHHH Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQS--------------YFPDGNDAQIMESLL-------GDNNEWVSARAALRNSDLFSIIL 61 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~-------~~~~~~v~~~~a~~~~~v~~~i~ 61 (392) ||+|+++++......+..... .......+.+..++. ..++..|+.++++++|+||+||+ T Consensus 1 M~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~v~~~~a~~~~~v~~~i~ 80 (466) T protein:vir:81 1 MRLIDRLLSTRGAAPRMSIDDYAQMLNEFAFNGIGYGFGGGVPRIQQTLAGPSTELAPDTFVGLATQAYQANGPVFACML 80 (466) T ss_pred CchhHHHhhccCcccccchhhhhhhhhhhhccccccccccccHHHHHhhccccccccCccccccchhhhhccHHHHHHHH Confidence 999999988765432221110 011112222333332 23567799999999999999999 Q ss_pred HHHHhhhhCceeeecccc-----------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC--------CceE Q lcl|Aclame:pro 62 QLSSDLAIVKINAEKKKN-----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN--------GADM 122 (392) Q Consensus 62 ~ia~~ia~~p~~~~~~~~-----------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~--------G~~~ 122 (392) +||++||+||++++++.. ..++.+||++||+++||+.++.+++++||+|++|.|+.. |.++ T Consensus 81 ~Ia~~ia~lp~~~~~~~~~~~~~~~~~~~~~L~~~PN~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~g~l~~~~~g~~~ 160 (466) T protein:vir:81 81 VRQLVFSSVRFRWQRLRDGKPSDTFGSRDLQILETPWKGGTTQDMLSRMIQDADLAGNSYWTIVDGEFVRMRPDWVDVVV 160 (466) T ss_pred HHHHhhccCceEEEEecCCceeeccccHHHHHhhCCCCCCCHHHHHHHHHHHHHhcCCeEEEEEecCccccccccCccee Confidence 999999999999997542 236789999999999999999999999999999999754 5589 Q ss_pred EEEEeccccceeeecCccceE-EEEEEecCc-ceeeeEEEeceeEEEecCC-CcccccccCCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 123 KWEYLRPSQVNTYYFEYENGM-YYNITFDDP-KIEPILQAPQSDLIHMKLL-SIDGGKTGISPLYSLRRESKIQRASDRL 199 (392) Q Consensus 123 ~l~~l~~~~v~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~vih~~~~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~ 199 (392) +++|++|+.|++..+.++... .|.++.... .......+++++||||++. ++.+..+|+||+..++++|..+.+++++ T Consensus 161 ~l~~l~~~~v~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~dviHir~~~~~~d~~~G~s~i~~~~~~i~~~~a~~~~ 240 (466) T protein:vir:81 161 EERMVRGGRGELGGGQLGWRKVGYLYTEGGRQSGNESVGFLAEDVVHFAPIPDPLASYRGMSWLTPILREIRADQAMSKH 240 (466) T ss_pred EEEEecCcceEEEEcCCCceEEEEEEEecCcccccceeeeccccEEEEcCCCCcccccccccHHHHHHHHHHHHHHHHHH Confidence 999999999999998877654 344444332 2345678999999999975 3456678999999999999999999999 Q ss_pred HHHHHHcCCCcceEEEeCCCCCchH--HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 200 TISSLNSSLNVPGVLTVKGGGLLSD--KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAK 277 (392) Q Consensus 200 ~~~~~~ng~~~~~il~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~ 277 (392) ..++|+||++|+||+++++..++++ +.++.+.+.+.|..|+|+++||++|++|++++.+++|+||+|++++++++||+ T Consensus 241 ~~~~f~ng~~p~gil~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~ 320 (466) T protein:vir:81 241 QAKFFDNGATVNLVIKHNPMADPAAVKKWADEVNSKHAGVDNAWKNLNLYPGADADVVGSNLQEIDFKNVRGGGETRIAA 320 (466) T ss_pred HHHHHhcCCCcceEEecCCCCCHHHHHHHHHHHHHHhcCccccccceEcCCCceEEEccCChhHHHHHHHHHHHHHHHHH Confidence 9999999999999999998776654 44567778888999999999999999999999999999999999999999999 Q ss_pred HhcccHHHcCCccc---c-cc-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHH- Q lcl|Aclame:pro 278 VYGLPDSYIGGQGD---Q-QS-SIQQISGMYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLST- 344 (392) Q Consensus 278 ~fgVP~~~lg~~~~---~-~~-~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~- 344 (392) +|||||++||...+ + ++ .+++.+.|+++||.|++++|+++|+.+|++ +++||...+++.|.+++.+. T Consensus 321 ~fgVPp~~lG~~~~~~~st~sn~eq~~~~f~~~tl~P~~~~ie~~l~~~L~~~~~~~~~~~~f~~~~llr~d~~~r~~~~ 400 (466) T protein:vir:81 321 AAGVPPVIVGLSEGLAAATYSNYGQARRRLADGTAHPLWQNLSGCIGHVMPDMGPDVRLWYDADDVPFLREDEKDAADIQ 400 (466) T ss_pred HhCCCHHHcccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccCcceEEEecchhhhccCHHHHHHHH Confidence 99999999996422 1 23 346778999999999999999999999974 46788889999998877654 Q ss_pred ------HHHHHhCCCcCHHHHHHHHHhCC---CCccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 345 ------ISTATRWGALAENQATFVLQEAG---YIPKDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 345 ------~~~~~~~g~~T~nE~R~~l~~~g---~~~~e~~~~e~~~~~~~gd~~~p~p 392 (392) +..++++|+ |+||+|+.+.... +.+.++...+.+++....+...+.| T Consensus 401 ~~~~~~~~~~~~~g~-t~nE~r~~~~~gd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (466) T protein:vir:81 401 KVRAETINTLITAGY-EPESVVAAVNSGDLRLLKHTGLTSVQLLPPGVSASASSDTP 456 (466) T ss_pred HHHHHHHHHHHHcCC-ChhhccccccCCccccccCCCcchhhhcccccccccCCCCc Confidence 667888885 9999997642111 1112222222222211111111222 No 51 >protein:vir:9702 Length: 406 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:174 # MgeName: 315.2 # Cross-refs: genbank:acc:NP_795464;genbank:gi:28876227;genbank:GeneID:1257772 Probab=100.00 E-value=2.5e-76 Score=435.05 Aligned_cols=368 Identities=20% Similarity=0.233 Sum_probs=284.9 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) |+||+....... +.+..+..++.+..+..++..+||++++||+||++||++||+||+++++++. T Consensus 1 m~~f~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~Al~~~~V~~~i~~Ia~~iA~lp~~~~~~~g~~~ 67 (406) T protein:vir:97 1 MSFFQPLGTSKV-------------SYDDYISSVLAGDVSQKYLGVSALKNSDILTATSIIAGDIARFPLVKKDVNGDII 67 (406) T ss_pred CccccccCCCCC-------------CcchHHHHHhcCCCCcccccchhhccHHHHHHHHHHHHhhhhCeeEEEecCcccc Confidence 999975332211 1111222233344455677788999999999999999999999999887543 Q ss_pred ------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeecc-CCceEEEEEeccccceeeecCccceEEEEEEecCc Q lcl|Aclame:pro 80 ------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNA-NGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDP 152 (392) Q Consensus 80 ------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~-~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 152 (392) ..++.+||++||+++||+.++.+|+++||+|+++.|+. .|++.+|+|++|+.|++..++++. ++|.+.. . T Consensus 68 ~~~~~~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gnay~~i~r~~~~g~~~~L~~i~p~~v~v~~~~~~~-~~y~~~~--~ 144 (406) T protein:vir:97 68 HDEDINYLLNVKSTSNASARTWKFAMAVNAILTGNSFSRILRDPKTNQALQFQFYRPSETTVEETDNHE-IVYTFTD--M 144 (406) T ss_pred ccchHHHHhhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCCCeEEEEEEECCCeeEEEEcCCce-EEEEEEe--c Confidence 23457899999999999999999999999999999985 689999999999999998776554 4444332 2 Q ss_pred ceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH--HHHHHH Q lcl|Aclame:pro 153 KIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KDKASR 230 (392) Q Consensus 153 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~--~~~~~~ 230 (392) .++..+.+++++|||+++++.++ ++|+||+.+++.++..+.+++++..++|+||++|++++..++..++++ +.++.| T Consensus 145 ~~~~~~~~~~~evih~r~~~~dg-~~G~spi~~~~~~i~~~~a~~~~~~~~f~ng~~~~~i~~~~~~l~~e~~~~~~~~~ 223 (406) T protein:vir:97 145 LTAKQVKCFAHDVIHWKFFSHDT-ILGRSPLLSLGDEIDLQTGGINTLIKFFKDGFSSGILTMKGAQLSGDARQRARQEF 223 (406) T ss_pred CCceEEEEccccEEEecCCCCCC-cccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEecCCCCCHHHHHHHHHHH Confidence 34567789999999999987666 679999999999999999999999999999999988888777655553 334555 Q ss_pred HHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHH Q lcl|Aclame:pro 231 SRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRY 310 (392) Q Consensus 231 ~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~ 310 (392) .+.+.+ .|+|+++||++|++|++++.+++|+||+|++++++++||++|||||++||+.++..+.+++.+.|+++||+|+ T Consensus 224 ~~~~~g-~n~g~~~vl~~g~~~~~l~~~~~d~q~le~~~~~~~~Ia~afgVPp~~lg~~~~~~~~e~~~~~f~~~~l~P~ 302 (406) T protein:vir:97 224 EKMREG-SVGGSPLVFDSTMEYTPLEIDTNVLQLITSNNFSTAQIAKALRVPSYKLGVNSPNQSVAQLMEDYVTNDLPFY 302 (406) T ss_pred HHHhcc-cccCceeecCCCceEEEccCCHHHHHHHHHHHhhHHHHHHHhCCCHHHcCCCCCcchHHHHHHHHHHHHHHHH Confidence 555544 6889999999999999999999999999999999999999999999999986666666788899999999999 Q ss_pred HHHHHHHHHHHhhhh-------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCc--cccccc-cCCC Q lcl|Aclame:pro 311 LRPAISELEYKLSDH-------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIP--KDLPAP-ENTN 380 (392) Q Consensus 311 l~~i~~~l~~~l~~~-------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~--~e~~~~-e~~~ 380 (392) +++|+++|+.+|++. ++||+ +.+.....+.+.+++++|++|+||+|++++..+.+. .|.+.. -|.. T Consensus 303 ~~~ie~~l~~kll~~~~~~~~~i~fd~----~~~~~~~~~~~~~~~~~g~~T~NE~R~~~g~~p~~~~~gD~~~~~~n~~ 378 (406) T protein:vir:97 303 FDAITSELGLKTLNDKDRRLYHIEFDT----RSVTGRNVDEIVKLVNNQILTPNQGLVELGKQKSTDPNMDRYQSSLNYV 378 (406) T ss_pred HHHHHHHHhhhhcChhhccceeEEEec----CccchhhHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeEeeccCcc Confidence 999999999998753 45554 345566677888999999999999999985554432 121111 1222 Q ss_pred CCCCCCCCC--------CCC Q lcl|Aclame:pro 381 KKTTGQSNE--------PVP 392 (392) Q Consensus 381 ~~~~gd~~~--------p~p 392 (392) |+...++.+ .-+ T Consensus 379 ~~~~~~~~~~~~~~~~~gg~ 398 (406) T protein:vir:97 379 FLDKKEEYQDKVGIKGKGGE 398 (406) T ss_pred chhcccccccccccccCCCC Confidence 222111111 001 No 52 >protein:vir:93943 Length: 409 # NCBI annotation: ORF010 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1485 # MgeName: 3A # Cross-refs: genbank:acc:YP_239936;genbank:gi:66395598;genbank:GeneID:5131009 Probab=100.00 E-value=4.1e-76 Score=433.89 Aligned_cols=376 Identities=15% Similarity=0.124 Sum_probs=291.0 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc- Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN- 79 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~- 79 (392) -+-+|+.+++...... ....+...... +..+.+.++..|+.++++++++|++||++||++||+||++++++.. T Consensus 2 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~V~~ci~~Ia~~ia~lp~~~~~~~~~ 75 (409) T protein:vir:93 2 AKENIVTRIKKKLIDN---WIDQSTSKLYD---FSPWKNRSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKV 75 (409) T ss_pred Cccchhhhhhhhhhhh---hhccccccccc---cccccCccccccchhhhhccHHHHHHHHHHHHhhhhCceeEeecccc Confidence 1225665544322111 11111111111 2222234455688899999999999999999999999999987653 Q ss_pred ------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcc Q lcl|Aclame:pro 80 ------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPK 153 (392) Q Consensus 80 ------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~ 153 (392) +.++.+||++||+++||+.++.+++++||+|+++.|+.+|++++|||++|+.|++..+.+++.++|.+...+ T Consensus 76 ~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~~~~~~~~~~~~y~~~~~~-- 153 (409) T protein:vir:93 76 VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAAT-- 153 (409) T ss_pred ccchHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcCC-- Confidence 245679999999999999999999999999999999999999999999999999999888888877665443 Q ss_pred eeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHH--HHHHH Q lcl|Aclame:pro 154 IEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKD--KASRS 231 (392) Q Consensus 154 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~--~~~~~ 231 (392) +..+.+++++|||++++++.+..+|+||+.+++..+..+.+++++. ++.++..++++++.++..++++.. ++.+. T Consensus 154 -g~~~~~~~~eVih~r~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~~ 230 (409) T protein:vir:93 154 -GNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQVLEDFK 230 (409) T ss_pred -ceEEEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCceEEecCCCCCHHHHHHHHHHHH Confidence 4567899999999998777777899999999999999999998874 666666677788777765554322 23333 Q ss_pred HHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-ch-HHHHHHHHHHHHHH Q lcl|Aclame:pro 232 RSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-SS-IQQISGMYASALNR 309 (392) Q Consensus 232 ~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-~~-~~~~~~~~~~~l~p 309 (392) +. ..++|+++++++|++|++++++++|+||+|++++++++||++|||||++||+.++++ ++ +++.+.|+++||.| T Consensus 231 ~~---~~~~g~~~vl~~g~~~~~l~~~~~d~q~~e~r~~~~~~Ia~~fgVPp~~lg~~~~~~~sn~e~~~~~f~~~~l~P 307 (409) T protein:vir:93 231 QY---YEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLP 307 (409) T ss_pred HH---hhcCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHH Confidence 32 346789999999999999999999999999999999999999999999999755433 33 56778999999999 Q ss_pred HHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccc-cCCC Q lcl|Aclame:pro 310 YLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAP-ENTN 380 (392) Q Consensus 310 ~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~-e~~~ 380 (392) +++.|+++|+++|++ .++||...+++.|.+++++.+++++++|++|+||+|++++..+++..|.+.. -++. T Consensus 308 ~~~~ie~~l~~~Ll~~~~~~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~ggD~~~~~~n~~ 387 (409) T protein:vir:93 308 IVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLY 387 (409) T ss_pred HHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeeeeccccc Confidence 999999999999863 3788999999999999999999999999999999999986555543332221 1221 Q ss_pred C----------CCCCCC--CCC Q lcl|Aclame:pro 381 K----------KTTGQS--NEP 390 (392) Q Consensus 381 ~----------~~~gd~--~~p 390 (392) | ..||+. ++- T Consensus 388 ~~~~~~~~~~~~~gG~~n~~e~ 409 (409) T protein:vir:93 388 PIDTPLELRKSLKGGDKNVNES 409 (409) T ss_pred ccccchhhcccccCCCCCcCCC Confidence 2 233322 222 No 53 >protein:vir:100882 Length: 383 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1473 # MgeName: Lc-Nu # Cross-refs: genbank:acc:YP_358762;genbank:gi:78000027;genbank:GeneID:3726153 Probab=100.00 E-value=7.2e-76 Score=432.54 Aligned_cols=370 Identities=23% Similarity=0.401 Sum_probs=300.8 Q ss_pred chhhHhhc-ccccccccccccccccccchhhhhhh-hcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc Q lcl|Aclame:pro 3 LPILNFIN-QTNDPPEVGSVQSYFPDGNDAQIMES-LLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) Q Consensus 3 Mg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~ 80 (392) ||||++.. .+..+.. . ... ....++.. +.+..+..|+.++++++++|++||++||+++|++|++++++... T Consensus 1 Mg~~~~~~~~k~~~~~-~-----~~~-~~~~~~~~~~~~~~~~~v~~~~~l~~~~v~~~i~~ia~~ia~~~~~~~~~~~~ 73 (383) T protein:vir:10 1 MGLLTPKNFSKRNAKN-M-----VYP-SNPAFFTTTVGGMQLSYVSALSALQNTNVYSVINRIASDVSSAHFKTENTATL 73 (383) T ss_pred CCcccccccccccccc-c-----ccc-cchhhhhhhccCccccccchhHhhcchHHHHHHHHHHHhhccCceeecccchh Confidence 99998642 2221111 1 111 11122222 23445667899999999999999999999999999999999999 Q ss_pred cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcceeeeEEE Q lcl|Aclame:pro 81 GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQA 160 (392) Q Consensus 81 ~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (392) .++.+||++||+++||+.++.+++++||+|++++|+ +.+++|+++..|++..+. +..++.+.... ++..+++ T Consensus 74 ~ll~~PN~~~t~~~f~~~~~~~l~l~Gn~~~~i~~~----~~~~~p~~~~~v~~~~~~--~~~~~~~~~~~--~~~~~~~ 145 (383) T protein:vir:10 74 NRLESPSSLIGRFSFWQGALMQLCLSGNDYIPLVGQ----NLEHIPNSDVQINYLPGN--MGIVYTVLESN--DRPKMVL 145 (383) T ss_pred hhhhCCCCCCCHHHHHHHHHHHhhhcCCeEEEEEcC----ceeEeecCcceEEEEEcC--CceEEEEEEcC--CceEEEE Confidence 999999999999999999999999999999999865 466777777777665543 34444444443 3566889 Q ss_pred eceeEEEecCCCccc--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHH---HHHHHHHHHh Q lcl|Aclame:pro 161 PQSDLIHMKLLSIDG--GKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDK---DKASRSRSFM 235 (392) Q Consensus 161 ~~~~vih~~~~~~~~--~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~---~~~~~~~~~~ 235 (392) ++++|||+|+.++++ ..+|+||+..++..+..+.+++++..++|+||++|+|++++++...+++. .++.+.+ +. T Consensus 146 ~~~evih~r~~~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~~~~f~ng~~~~~il~~~~~~~~~e~~~~~~~~~~~-~~ 224 (383) T protein:vir:10 146 RQDQMLHFRLMPDPQYRYLIGRSPLESLQNALNLDDKASKSNMSAMENQINPAGKLTISNYLSDGKDLESAREEFEK-AN 224 (383) T ss_pred cccceEEeccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHHHHHHHH-Hh Confidence 999999999876544 46899999999999999999999999999999999999999987654432 2334444 44 Q ss_pred ccccCCceeeccCCceEeecccChhhHHH-HHHHHHHHHHHHHHhcccHHHcCCccc---ccchHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 236 KRSRSGGPVVLDDLEEFTALEIKSNVAQL-LSQTDWTSKQYAKVYGLPDSYIGGQGD---QQSSIQQISGMYASALNRYL 311 (392) Q Consensus 236 ~~~~~g~~~vl~~g~~~~~l~~~~~d~~~-~e~~~~~~~~Ia~~fgVP~~~lg~~~~---~~~~~~~~~~~~~~~l~p~l 311 (392) +..|+|+++++++|++|++++.+++|+|+ .|++++++++||++|||||++||+... .+++.++...++..||.|++ T Consensus 225 ~~~n~~~~~vl~~g~~~~~l~~~~~d~~~l~e~~~~~~~~Ia~afgVPp~~lg~~~~~~~~~sn~eq~~~~~~~~l~P~~ 304 (383) T protein:vir:10 225 TGDNSGRLMVLPDGFDYTQLEMKTDVFKALADNSAYSADQISKAFGVPSDILGGGTSTESQHSNIDQIKATYLANLNSYV 304 (383) T ss_pred CccccCCccccCCCceEEecCCChhHHHHHHHHHHHHHHHHHHHhCCCHHHcCCccCCCCccccHHHHHHHHHHHHHHHH Confidence 44789999999999999999999999997 499999999999999999999996432 23556777778889999999 Q ss_pred HHHHHHHHHHhh-hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccc-cCCCCCCCCCCC Q lcl|Aclame:pro 312 RPAISELEYKLS-DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAP-ENTNKKTTGQSN 388 (392) Q Consensus 312 ~~i~~~l~~~l~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~-e~~~~~~~gd~~ 388 (392) +.|+++++.+|+ .+++||...+++.|.+++++.+..++++|++|+||+|++++..|+++.|.+.. .++++.+|||.. T Consensus 305 ~~ie~~l~~~l~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~t~nE~R~~lg~~p~~~~d~~~~~~~~~~~~gGd~e 383 (383) T protein:vir:10 305 NPIVDELRLKMNAPDLELDIKDMLDVDDSILINQVSNLAKSGVLGAEQAQFILTRSGFLPDNLPEFKPLTNETKGGDDK 383 (383) T ss_pred HHHHHHHHHhhCCceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCcccCCcccccCCCcccCCCCCCC Confidence 999999999986 57999999999999999999999999999999999999999889888776554 466778887766 No 54 >protein:vir:94426 Length: 409 # NCBI annotation: ORF009 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1506 # MgeName: 47 # Cross-refs: genbank:acc:YP_240003;genbank:gi:66395665;genbank:GeneID:5133086 Probab=100.00 E-value=2.6e-75 Score=429.49 Aligned_cols=378 Identities=15% Similarity=0.120 Sum_probs=293.6 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~ 80 (392) -+=+|+.++++...... .........+ |..+.+.....|+.++|+++++|++||++||++||+||++++++... T Consensus 2 ~~~~~~~~~k~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~v~~~~a~~~~~v~~~i~~Ia~~ia~lp~~~~~~~~~ 75 (409) T protein:vir:94 2 AKENIVTRIKKKLIDNW---IDQSASKLYD---FSPWKNKSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKV 75 (409) T ss_pred cccccchhhhhHHhhhh---hcCCcccccc---cccccCccccccchhhhhccHHHHHHHHHHHHhhhhCceeEeecccc Confidence 22366666665431111 1111111111 22233344566889999999999999999999999999999876532 Q ss_pred -------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcc Q lcl|Aclame:pro 81 -------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPK 153 (392) Q Consensus 81 -------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~ 153 (392) .++.+||++||+++||+.++.+++++||+|+++.|+.+|+|++|||++|+.|++..+.+++.++|.+...+ T Consensus 76 ~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~~-- 153 (409) T protein:vir:94 76 VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAAT-- 153 (409) T ss_pred cchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcCC-- Confidence 35679999999999999999999999999999999999999999999999999999888888877665443 Q ss_pred eeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHH--HHHHH Q lcl|Aclame:pro 154 IEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKD--KASRS 231 (392) Q Consensus 154 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~--~~~~~ 231 (392) +..+.+++++|||+++++..+..+|+||+..++.++..+.+++++. ++.++..++++++.++..++++.. ++.|. T Consensus 154 -g~~~~~~~~dvih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~~ 230 (409) T protein:vir:94 154 -GNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVGKEKRQQVLEDFK 230 (409) T ss_pred -ceEEEEccccEEEecCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCCeeEEecCCCCCHHHHHHHHHHHH Confidence 4567899999999998777777889999999999999999998884 556666667788777766554322 33444 Q ss_pred HHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc--chHHHHHHHHHHHHHH Q lcl|Aclame:pro 232 RSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQQISGMYASALNR 309 (392) Q Consensus 232 ~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~--~~~~~~~~~~~~~l~p 309 (392) +.+ .++|++++|++|++|++++.+++|+||+|++++++++||++|||||++||+.++++ +.+++.+.|+++||.| T Consensus 231 ~~~---~~~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~sn~e~~~~~f~~~~l~P 307 (409) T protein:vir:94 231 QYY---EENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKNEELNRFYLQHTLLP 307 (409) T ss_pred HHh---hcCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHH Confidence 333 46789999999999999999999999999999999999999999999999755433 3356788999999999 Q ss_pred HHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccc-cCCC Q lcl|Aclame:pro 310 YLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAP-ENTN 380 (392) Q Consensus 310 ~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~-e~~~ 380 (392) +++.|+++|+.+|++ .++||.+.+++.|.+++++.++.++++|++|+||+|++++..+++..|.... -++. T Consensus 308 ~~~~ie~~ln~~Ll~~~~~~~~~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~p~~ggD~~~~~~n~~ 387 (409) T protein:vir:94 308 IVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLY 387 (409) T ss_pred HHHHHHHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcCeEeeccccc Confidence 999999999999863 3788999999999999999999999999999999999986555543332221 1111 Q ss_pred ----------CCCCCCCCCCCC Q lcl|Aclame:pro 381 ----------KKTTGQSNEPVP 392 (392) Q Consensus 381 ----------~~~~gd~~~p~p 392 (392) ...||++|.=-= T Consensus 388 ~~~~~~~~~~~~kGG~~n~~e~ 409 (409) T protein:vir:94 388 PIDTPLELRKSLKGGDKNVNES 409 (409) T ss_pred ccccchhhcccccCCCCCcCCC Confidence 123443221111 No 55 >protein:vir:96980 Length: 409 # NCBI annotation: ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1643 # MgeName: 42e # Cross-refs: genbank:acc:YP_239857;genbank:gi:66395516;genbank:GeneID:5133013 Probab=100.00 E-value=2.1e-75 Score=430.01 Aligned_cols=378 Identities=15% Similarity=0.120 Sum_probs=294.2 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc- Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN- 79 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~- 79 (392) -+|+||.++++..-... .........+ |..+.+.....|+.++++++++|++||++||++||+||++++++.. T Consensus 2 ~~~~~~~~~k~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~v~~~~a~~~~~V~~ci~~ia~~ia~lp~~~~~~~~~ 75 (409) T protein:vir:96 2 AKENIVTRIKKKLIDNW---IDQSASKLYD---FSPWKNKSFWGVINNTLETNETIFSAITKLSNSMASLPLKMYEDYKV 75 (409) T ss_pred ccccchhhhhhHHhhhh---hccccccccc---cccccCccccccchhhHhhhHHHHHHHHHHHHhhhhCceEEeecccc Confidence 57888888776421111 0111111111 2223334455688899999999999999999999999999998653 Q ss_pred ------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcc Q lcl|Aclame:pro 80 ------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPK 153 (392) Q Consensus 80 ------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~ 153 (392) +.++.+||++||+++||+.++.+++++||+|++++|+.+|++++|||++|+.|++..+.+++.++|.+... T Consensus 76 ~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~G~~~~L~~l~~~~v~v~~~~~~~~~~y~~~~~--- 152 (409) T protein:vir:96 76 VNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQSRELYYSIHAA--- 152 (409) T ss_pred cchhHHHHHhhhcccCCCHHHHHHHHHHHHhhcCceEEEEEECCCCcEEEEEEEcCceeEEEEeCCCcEEEEEEEcC--- Confidence 24567999999999999999999999999999999999999999999999999999988888877766543 Q ss_pred eeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHH--HHHHHH Q lcl|Aclame:pro 154 IEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDK--DKASRS 231 (392) Q Consensus 154 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~--~~~~~~ 231 (392) .+..+.+++++|||++++++.+..+|+||+..++..+..+.+++++. ++.++..++++++.++..++++. .++++. T Consensus 153 ~g~~~~~~~~evih~r~~~~~~~~~G~s~l~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~l~~e~~~~~~~~~~ 230 (409) T protein:vir:96 153 TGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSNVSTEKRQQVLEDFK 230 (409) T ss_pred CceEEEEccccEEEeCCCCCCCccccccHHHHHHHHHHHHHHHHHHH--HHhcCCCceeEEecCCCCCHHHHHHHHHHHH Confidence 24567899999999998777777899999999999999999988874 44555555667777666555432 233343 Q ss_pred HHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc--chHHHHHHHHHHHHHH Q lcl|Aclame:pro 232 RSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQQISGMYASALNR 309 (392) Q Consensus 232 ~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~--~~~~~~~~~~~~~l~p 309 (392) +.+ .++|++++|++|++|++++++++|+||+|++++++++||++|||||++||+.++++ +.+++.+.|+++||.| T Consensus 231 ~~~---~n~g~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~~~~~s~~e~~~~~f~~~~l~P 307 (409) T protein:vir:96 231 QYY---EENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSNTNFAKNEELNRFYLQHTLLP 307 (409) T ss_pred HHh---hcCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccHHHHHHHHHHHHHHH Confidence 333 46789999999999999999999999999999999999999999999999755432 3456788999999999 Q ss_pred HHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccc-cCCC Q lcl|Aclame:pro 310 YLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAP-ENTN 380 (392) Q Consensus 310 ~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~-e~~~ 380 (392) +++.|+++|+.+|++ +++||...+++.|.+++++.+..++++|++|+||+|++++..+++..|.... -++. T Consensus 308 ~~~~ie~~l~~~Ll~~~~~~~g~~i~fd~~~ll~~d~~~~~e~~~~~~~~G~~T~NE~R~~~g~~pi~ggD~~~~~~n~~ 387 (409) T protein:vir:96 308 IVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPPVEGGDKPLISGDLY 387 (409) T ss_pred HHHHHHHHHHhhcCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCcceeeeccccc Confidence 999999999999863 3788999999999999999999999999999999999986665543332221 1222 Q ss_pred C----------CCCCCCCCCCC Q lcl|Aclame:pro 381 K----------KTTGQSNEPVP 392 (392) Q Consensus 381 ~----------~~~gd~~~p~p 392 (392) | ..|||.|+=-= T Consensus 388 ~~~~~~~~~~~~~gG~~n~~e~ 409 (409) T protein:vir:96 388 PIDTPLELRKSLKGGDKNVNES 409 (409) T ss_pred ccccchhhcccccCCCCCcCCC Confidence 2 23333322111 No 56 >protein:vir:101647 Length: 460 # NCBI annotation: phage portal protein # Family: family:all:26542 # MgeID: mge:1646 # MgeName: 11b # Cross-refs: genbank:acc:YP_112492;genbank:gi:53793592;uniprot:Q5ZGG1;genbank:GeneID:3101755 Probab=100.00 E-value=1.7e-74 Score=425.02 Aligned_cols=383 Identities=11% Similarity=0.102 Sum_probs=286.9 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhc--CCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLL--GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKK 78 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~ 78 (392) |+.-|-+.+++.+... .+ +.+.....+-..++ ..++..++.+.++++|+||+||++||+++|+||+++|++. T Consensus 1 ~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~v~~~v~~ia~~iA~lp~~v~~~~ 74 (460) T protein:vir:10 1 MANRIIRALRELTGLD-NK-----FNDAFIKYIGQTFTKYDNNGKTYLEQGYNINPDVYSCISQMAAKTVAVPYTIKVVK 74 (460) T ss_pred CchhHHHHHhhhhccC-CC-----chHHHHHhhccccCCCccchhhhhHHHHhcchHHHHHHHHHHHhhhhCceEEEecc Confidence 6555555554333111 11 11100000011112 2356778999999999999999999999999999999765 Q ss_pred ccc---------------------------------------ccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeecc-- Q lcl|Aclame:pro 79 NQG---------------------------------------IIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNA-- 117 (392) Q Consensus 79 ~~~---------------------------------------~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~-- 117 (392) .+. ++.+||++||+++||+.++.+++++||||++++|+. T Consensus 75 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~PN~~~t~~~f~~~~~~~lll~Gnay~~i~r~~~~ 154 (460) T protein:vir:10 75 DTKAYQQLNNLNISTKGLYSFTQSLQKNRLDTKAFSETEKAFPLESPNPTQTWADIYSLYKTYMRLNGNCYFYLMSPDDG 154 (460) T ss_pred CCccchhhhhhhhhhhhhHHHHHHhhcchhhhcccchhHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEecCCC Confidence 332 466899999999999999999999999999999964 Q ss_pred --CCceEEEEEeccccceeeecCccceEEEEEE---ecCcceeeeEEEeceeEEEecCCCcc-----cccccCCHHHHHH Q lcl|Aclame:pro 118 --NGADMKWEYLRPSQVNTYYFEYENGMYYNIT---FDDPKIEPILQAPQSDLIHMKLLSID-----GGKTGISPLYSLR 187 (392) Q Consensus 118 --~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~vih~~~~~~~-----~~~~G~s~~~~~~ 187 (392) .|++.+||||+|+.|++..+.++...++.+. +....++....+++++|||+|+++++ +..+|+||+..++ T Consensus 155 ~~~G~~~~L~~l~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~evih~r~~~~~~~~~~~~~~G~sp~~~~~ 234 (460) T protein:vir:10 155 INAGVPSQMYVLPAHLIKIVLKDDINLLSTDSPIKSYMLIQGDQFIEFNEDEVIHTKYANPNFDLQGSHLYGMSPIRAIL 234 (460) T ss_pred ccCceeEEEEEEcCceEEEEEcCCCceeeeeeeeeEEEEecCceeEEecccceEEEecCCCCcccccCccccccHHHHHH Confidence 4799999999999999999888766554332 22223566789999999999977654 4578999999999 Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH--HHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHH Q lcl|Aclame:pro 188 RESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLL 265 (392) Q Consensus 188 ~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~ 265 (392) ..+..+.+++++..++|+||+.|+++++.++..++++ +.++.|.+.+.|..|+|++++|++|++|++++++++|+||+ T Consensus 235 ~~i~~~~~~~~~~~~~f~ng~~~~~i~~~~~~l~~e~~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~l~~~~~d~q~~ 314 (460) T protein:vir:10 235 RNINSQNSTIDNNVKTMQNGGVFGFIHGGSTGLTQPQADSLKQRLTEMDKSPDRLSQIAGASGEIAFTKISLNTDELKPF 314 (460) T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceeeecCCCCCHHHHHHHHHHHHHHhcCccccCCceecCCCceEEEccCChhHHHHH Confidence 9999999999999999999999999999888776664 34567788888999999999999999999999999999999 Q ss_pred HHHHHHHHHHHHHhcccHHHcCCccccc----chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--------hcccchhh Q lcl|Aclame:pro 266 SQTDWTSKQYAKVYGLPDSYIGGQGDQQ----SSIQQISGMYASALNRYLRPAISELEYKLSDH--------ISVNMRPA 333 (392) Q Consensus 266 e~~~~~~~~Ia~~fgVP~~~lg~~~~~~----~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~--------~~~d~~~~ 333 (392) |++++++++||++|||||++||....++ +.+++...|++.||.|++.+|+++|+.+|++. ++||...+ T Consensus 315 e~~~~~~~~Ia~~fgVPp~~lg~~~~~t~~~sn~e~~~~~f~~~~l~P~~~~ie~~ln~kl~~~~~~~~~~~i~~d~~~l 394 (460) T protein:vir:10 315 DYLKYDQKAICNALGWSDKLLNNNEGGGLNTGNLEEERKRVVTDNIQPDLVILKQAFDKKFIKRFKGYENAVIEWDISEL 394 (460) T ss_pred HHHHHHHHHHHHHhCCCHHHhCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCceEEeecchh Confidence 9999999999999999999999754332 33567789999999999999999999999764 34444333 Q ss_pred hhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCC-c-ccccc-ccCCCCCCC-------CCCCCCC Q lcl|Aclame:pro 334 IDPLGDNYLSTISTATRWGALAENQATFVLQEAGYI-P-KDLPA-PENTNKKTT-------GQSNEPV 391 (392) Q Consensus 334 ~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~-~-~e~~~-~e~~~~~~~-------gd~~~p~ 391 (392) .. .....+....++++|++|+||+|++++..+.+ + .|... .-++-|++. +.+|+=. T Consensus 395 ~~--l~~d~~~~~~~~~~g~~T~NE~R~~~g~~pi~~~~gD~~~~~~n~~~~~~~~~~~~~~~~nq~~ 460 (460) T protein:vir:10 395 PE--MQTDMVAMASWLNTIPVTPNEIRIAMKYETLNQDGMDIVFMPSNKVRIDDVSNNLIDSAFNQNQ 460 (460) T ss_pred hh--HHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCCCCCeeeecccccchhhcccccCCCcccCCC Confidence 11 12233455678899999999999988444432 1 12111 112222211 1111111 No 57 >protein:vir:80134 Length: 403 # NCBI annotation: Phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1877 # MgeName: bacteriophage bv1 # Cross-refs: genbank:acc:YP_001425602;genbank:gi:155042935;genbank:GeneID:5469563 Probab=100.00 E-value=1.4e-72 Score=414.47 Aligned_cols=364 Identities=12% Similarity=0.108 Sum_probs=280.0 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhh-hcchHHHHHHHHHHHhhhhCceeeecccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAA-LRNSDLFSIILQLSSDLAIVKINAEKKKN-- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a-~~~~~v~~~i~~ia~~ia~~p~~~~~~~~-- 79 (392) |||||+|+++.......... .+....+.....++.... ..+|+||+||++||++||++|+++|++.. T Consensus 1 Mg~~~~f~~k~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~V~~~I~~ia~~iA~~p~~~~~~~~~g 70 (403) T protein:vir:80 1 MGLFNFFRRKTRSEPTNAIS----------WFLTQEAYDTLAIPGYTRLSDNPEVRMAVHKIAELISSMTIHLMQNTDNG 70 (403) T ss_pred Ccccccccccccccccchhh----------hhcccccccccccchhhhhhhhHHHHHHHHHHHHhhhhCceEEEEecCCc Confidence 99999988754332211111 011111111222333333 35899999999999999999999987543 Q ss_pred ---------ccccccCCccCCHHHHHHHHHHHHHHh--CCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEE Q lcl|Aclame:pro 80 ---------QGIIDNPSTNANKHGFWQSMFAQLLLG--GEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNIT 148 (392) Q Consensus 80 ---------~~~~~~PN~~~s~~~f~~~~~~~l~l~--Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~ 148 (392) ..++.+||++||+++||+.++.++++. ||||+++.++..|++.+||||+|+.|++..+.++..++| T Consensus 71 ~~~~~~~~~~lL~~~PN~~~t~~~f~~~~v~~~ll~~~Gna~i~~~~~~~g~~~~L~~l~p~~v~~~~~~~g~~~~y--- 147 (403) T protein:vir:80 71 DIRIKNELSRKIDINPYSLMTRKAWMYNIVYTMLLDGEGNSVVFPKYTTSGLIDELIPLAPSKVSFVDTDTGYQIWY--- 147 (403) T ss_pred eeecCChHHHHHhccCCcCCCHHHHHHHHHHHHhhcCCccEEEEEEEcCCCcEEEEEEEcCCeeEEEEcCCceEEEE--- Confidence 235679999999999999999999984 889999999999999999999999999988877644432 Q ss_pred ecCcceeeeEEEeceeEEEecC-CCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch--HH Q lcl|Aclame:pro 149 FDDPKIEPILQAPQSDLIHMKL-LSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS--DK 225 (392) Q Consensus 149 ~~~~~~~~~~~~~~~~vih~~~-~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~--~~ 225 (392) . ...+++++|||++. ..+.+.++|+||+..++.++....+++++..++|+||++|++++++++...++ ++ T Consensus 148 -~------~~~~~~~eiih~~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~~il~~~~~~~~~~~~~ 220 (403) T protein:vir:80 148 -Q------GKAYNYDEVLHFIVNPDPEKPYMGRGYRVVLKDIVNNLKQATTTKKSFMSGKYMPSLIVKVDAATAELSSEE 220 (403) T ss_pred -e------ecccchhhEEEEeccCCCcCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCChHHHHH Confidence 1 13578999999984 45566678999999999999999999999999999999999999998865554 44 Q ss_pred HHHHHHHHHhccccCCceeeccCC-ceEeecc-cChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHH Q lcl|Aclame:pro 226 DKASRSRSFMKRSRSGGPVVLDDL-EEFTALE-IKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMY 303 (392) Q Consensus 226 ~~~~~~~~~~~~~~~g~~~vl~~g-~~~~~l~-~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~ 303 (392) .++.+.+.+.+..++|++++++++ .+++++. ++++|+||+|.+++++++||++|||||++||..+ .+.++...|+ T Consensus 221 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~---~~~~~~~~f~ 297 (403) T protein:vir:80 221 GRNAVFKKYLEASEAGQPWIIPAELLDVEQVKPLSLKDLAIHETVELDKRTVAGIFGVPAFLLGVGK---YDKDEYNNFI 297 (403) T ss_pred HHHHHHHHHhhhhhcCCeeeecccccccceeccCCHHHHHHHHHHHHhHHHHHHHhCCCHHHcCCCC---ccHHHHHHHH Confidence 566778888899999999988765 4555544 5789999999999999999999999999998532 1234456799 Q ss_pred HHHHHHHHHHHHHHHHHHhhh----hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccc-cccC Q lcl|Aclame:pro 304 ASALNRYLRPAISELEYKLSD----HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLP-APEN 378 (392) Q Consensus 304 ~~~l~p~l~~i~~~l~~~l~~----~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~-~~e~ 378 (392) ..||.|+++.|+++|+.+|++ +++||...+++.|.+++++.+..++++|++|+||+|++++..+++..|.. ..-+ T Consensus 298 ~~~l~P~~~~ie~~l~~kll~~~~~~~~f~~~~ll~~d~~~~~~~~~~~~~~Gi~t~NE~R~~~gl~p~~ggd~~~~~~n 377 (403) T protein:vir:80 298 NSTILPIAKGIEQELTRKLLISPDLYFKFNPRSLYAYDLKELAEVGSNMYVRGLMEGNEVRDWLGLSPKEGLSELVILEN 377 (403) T ss_pred HHHHHHHHHHHHHHHHHhccCCCCcEEEeechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCeEeeccc Confidence 999999999999999999874 37899999999999999999999999999999999999855444332211 1112 Q ss_pred CCCC---------CCC------CCCC Q lcl|Aclame:pro 379 TNKK---------TTG------QSNE 389 (392) Q Consensus 379 ~~~~---------~~g------d~~~ 389 (392) ..|+ .+| +.++ T Consensus 378 ~~pl~~~~~~~~~k~ge~~~~~~~~~ 403 (403) T protein:vir:80 378 YIPLDKIGDQNKLKGGEKGGADGQTD 403 (403) T ss_pred ccchhhccchhhccCCCCCCCCCCCC Confidence 2111 111 1111 No 58 >protein:vir:104259 Length: 403 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1504 # MgeName: T5 # Cross-refs: genbank:acc:YP_006980;genbank:gi:46401881;genbank:GeneID:2777676 Probab=100.00 E-value=3.2e-72 Score=412.52 Aligned_cols=366 Identities=12% Similarity=0.101 Sum_probs=285.7 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) |||++|+.....+.++.. ....+ ... ........+.+.++++++|++||++||++||+||++++++.. T Consensus 1 mg~~~~~~~~~~~~~~~~-~~~~~-~~~-------~~~~~~~~t~~~~~~~~~v~~cv~~Ia~~ia~~p~~v~~~~~~~~ 71 (403) T protein:vir:10 1 MGFKSWITEKLNPGQRII-RDMEP-VSH-------RTNRKPFTTGQAYSKIEILNRTANMVIDSAAECSYTVGDKYNIVT 71 (403) T ss_pred Ccchhhhhhccchhhhhh-hcccc-ccc-------ccCCcccccHHHHHHHHHHHHHHHHHHHHHhhCceeEeecccccc Confidence 999999987766544322 11111 110 011112246688889999999999999999999999986421 Q ss_pred -----------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEE Q lcl|Aclame:pro 80 -----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNIT 148 (392) Q Consensus 80 -----------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~ 148 (392) +.++.+||++||+++||+.++.+++++||||+++.+ ..+++++++.|++..+.++... + +. T Consensus 72 ~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~~ll~Gnayi~~~~------~~l~~l~~~~~~v~~~~~~~~~-~-~~ 143 (403) T protein:vir:10 72 YANGVKTKTLDTLLNVRPNPFMDISTFRRLVVTDLLFEGCAYIYWDG------TSLYHVPAALMQVEADANKFIK-K-FI 143 (403) T ss_pred cccccccchHHHHHhhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEeC------ceeEeecCcceEEEEcCCceEE-E-EE Confidence 245678999999999999999999999999988753 3689999999999876544332 2 22 Q ss_pred ecCcceeeeEEEeceeEEEecCCC----cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH Q lcl|Aclame:pro 149 FDDPKIEPILQAPQSDLIHMKLLS----IDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) Q Consensus 149 ~~~~~~~~~~~~~~~~vih~~~~~----~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~ 224 (392) ..+ ...+..++|+|++..+ ..+..+|+||+.+++..+..+.++.++..++|+||++|+|++++++..++++ T Consensus 144 ~~~-----~~~~~~~eiih~~~~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~f~ng~~~~gil~~~~~l~~e~ 218 (403) T protein:vir:10 144 FNN-----QINYRVDEIIFIKDNSYVCGTNSQISGQSRVATVIDSLEKRSKMLNFKEKFLDNGTVIGLILETDEILNKKL 218 (403) T ss_pred ecC-----ceeecccceEEecccccccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHH Confidence 221 2457889999999654 3355789999999999999999999999999999999999999998777664 Q ss_pred --HHHHHHHHHHhccccCCceeeccCCceEeeccc--ChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHH Q lcl|Aclame:pro 225 --KDKASRSRSFMKRSRSGGPVVLDDLEEFTALEI--KSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQIS 300 (392) Q Consensus 225 --~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~--~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~ 300 (392) +.++.|.+.+.|..|+|++++|++|++|++++. ++.|+||+|++++++++||++|||||++||.. +.++.+++.+ T Consensus 219 ~~~~~~~~~~~~~g~~n~g~~~vl~~g~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~-~~sn~e~~~~ 297 (403) T protein:vir:10 219 RERKQEELQLDYNPSTGQSSVLILDGGMKAKPYSQISSFKDLDFKEDIEGFNKSICLAFGVPQVLLDGG-NNANIRPNIE 297 (403) T ss_pred HHHHHHHHHHHhCCcccCcceeecCCCceeEEecccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHcCCC-CCcCHHHHHH Confidence 445667888899999999999999999999985 57899999999999999999999999999853 3344567789 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccchhh--hhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCc---ccccc Q lcl|Aclame:pro 301 GMYASALNRYLRPAISELEYKLSDHISVNMRPA--IDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIP---KDLPA 375 (392) Q Consensus 301 ~~~~~~l~p~l~~i~~~l~~~l~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~---~e~~~ 375 (392) +|+++||.|++++|+++|+.+|..+++||...+ ++.|.+++++.+..++++|++|+||+|++++..+++. +.... T Consensus 298 ~f~~~tl~P~~~~ie~~l~~~L~~~~~~d~~~~~~l~~D~~~~~~~~~~~~~~G~lT~NE~R~~~gl~pi~~~~~d~~~~ 377 (403) T protein:vir:10 298 LFYYMTIIPMLNKLTSSLTFFFGYKITPNTKEVAALTPDKEAEAKHLTSLVNNGIITGNEARSELNLEPLDDEQMNKIRI 377 (403) T ss_pred HHHHHHHHHHHHHHHHHHHHhcCceeeeccchhhhcccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCccccccccc Confidence 999999999999999999999999999988754 7889999999999999999999999999984444321 11111 Q ss_pred ccCC----CCCCCCCCCCCCC Q lcl|Aclame:pro 376 PENT----NKKTTGQSNEPVP 392 (392) Q Consensus 376 ~e~~----~~~~~gd~~~p~p 392 (392) .-+. .+..+|+.++| + T Consensus 378 p~n~~~~~~~~~~~e~~~~-~ 397 (403) T protein:vir:10 378 PANVAGSATGVSGQEGGRP-K 397 (403) T ss_pred ccccccccccCCCCcCCCC-C Confidence 1111 12344444443 3 No 59 >protein:vir:960 Length: 413 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:19 # MgeName: bIL285 # Cross-refs: genbank:acc:NP_076614;genbank:gi:13095722;genbank:GeneID:920279 Probab=100.00 E-value=1e-71 Score=409.80 Aligned_cols=376 Identities=13% Similarity=0.112 Sum_probs=288.1 Q ss_pred CcchhhHhhcccccccccc--cccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVG--SVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKK 78 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~ 78 (392) |-|+||++.++.....+.. ....+.+......++.++.. + . ...++++++|++||++||++||++|++++++. T Consensus 11 ~~m~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~--~~~~~~~~~v~~cI~~ia~~ia~~~~~~~~~~ 85 (413) T protein:vir:96 11 KNLKFFNNKRSPTEESKAKDEIPKAPQVVMTLPNFFKELIS-D--G--YTKLSDSPEVRMAVDCIADLVSNMTIQLMQNG 85 (413) T ss_pred hcCCccccCCCcchhhhhhccccccccccccchhhHhhhcc-c--h--hHHHhhchHHHHHHHHHHHhhccCceEEEEec Confidence 8888887754433221111 11111111111122222211 1 1 12367899999999999999999999998754 Q ss_pred c-----------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCC-ceEEEEEeccccceeeecCccceEEEE Q lcl|Aclame:pro 79 N-----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANG-ADMKWEYLRPSQVNTYYFEYENGMYYN 146 (392) Q Consensus 79 ~-----------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G-~~~~l~~l~~~~v~~~~~~~~~~~~~~ 146 (392) . ..++.+||++||+++||+.++.+++++||+|++++|+.+| .+.+|||++|+.|++..+. +.+.|. T Consensus 86 ~~~~~~~~~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~r~~~g~~~~~L~~l~~~~v~~~~~~--~~~~y~ 163 (413) T protein:vir:96 86 ETGDKRIKNDLSRVVDIEPNKYLSRKTFIQWLVRSMLLEGNGNAVVKPQVSGDKIIGLTPISPYKVTFNVSD--DDLDYS 163 (413) T ss_pred CCCccccccHHHHHHHhccccCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCCceEEEEEecCceeEEEEcC--CeEEEE Confidence 3 2346799999999999999999999999999999999887 5789999999999988764 345555 Q ss_pred EEecCcceeeeEEEeceeEEEecC-CCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH- Q lcl|Aclame:pro 147 ITFDDPKIEPILQAPQSDLIHMKL-LSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD- 224 (392) Q Consensus 147 ~~~~~~~~~~~~~~~~~~vih~~~-~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~- 224 (392) +...+ ..+++++|||++. ++.++.++|.||+.++...+..+.+++++..++|+||++|+|++++++.+++++ T Consensus 164 ~~~~~------~~~~~~evih~k~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~p~gil~~~~~l~~e~~ 237 (413) T protein:vir:96 164 ITFDN------KEYDPSTLLHFVLNPSIERPFIGTGYKVALKDIVGNLKQASVTKKGFMASEYMPNLIVSVDSDSDELSD 237 (413) T ss_pred EeecC------cEEchhhEEEEeccCCCCCccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCCCCHHHH Confidence 54433 2578999999985 456667789999999999999999999999999999999999999998776653 Q ss_pred -HHHHHHHHHHhccccCCceeeccCCc-eEeec-ccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHH Q lcl|Aclame:pro 225 -KDKASRSRSFMKRSRSGGPVVLDDLE-EFTAL-EIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISG 301 (392) Q Consensus 225 -~~~~~~~~~~~~~~~~g~~~vl~~g~-~~~~l-~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~ 301 (392) +.+++|.+.+.+..|+|+++++++|. +++++ +.+++|+||+|++++++++||++|||||.+||.. .++.++... T Consensus 238 ~~~~~~~~~~~~g~~n~g~~~vl~~~~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~---~~~~~~~~~ 314 (413) T protein:vir:96 238 EEGRENFEEMYLKRKEAGKPWIIPEGMVNVQQIKPLTLNDLAINDAVTLDKKTVAGIFGVPAFLLGVG---TYNKDEFNN 314 (413) T ss_pred HHHHHHHHHHhcCccccCceeeecCCcccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCC---cchHHHHHH Confidence 44667788889999999999997655 55665 4688999999999999999999999999999853 234667889 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccccc-cc Q lcl|Aclame:pro 302 MYASALNRYLRPAISELEYKLSD---HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPA-PE 377 (392) Q Consensus 302 ~~~~~l~p~l~~i~~~l~~~l~~---~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~-~e 377 (392) |++.||+|+++.|+++|+++|++ +++||...+++.|.+++++.+..++++|++|+||+|++++..+.+..|... .- T Consensus 315 ~~~~~l~P~~~~ie~~ln~~ll~~~~~~~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~p~~~gd~~~~~~ 394 (413) T protein:vir:96 315 FINTKIMSIAQVIQQTYNKLIVEEDMYFSLNPRSLYNYSLTEMVSAGAQMTQLNALRRNEFRNWVGMPPDAEMDDLLVLE 394 (413) T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCcEEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeecc Confidence 99999999999999999999964 579999999999999999999999999999999999998555543222211 12 Q ss_pred CCCCCCCCCCCCCCC Q lcl|Aclame:pro 378 NTNKKTTGQSNEPVP 392 (392) Q Consensus 378 ~~~~~~~gd~~~p~p 392 (392) +..|+.....+++.+ T Consensus 395 n~~~~~~~~~~~~~~ 409 (413) T protein:vir:96 395 NYLQQKDLVNQKKLI 409 (413) T ss_pred cccchhhcccccCCC Confidence 223322222222222 No 60 >protein:vir:102727 Length: 945 # NCBI annotation: portal protein # Family: family:all:2446 # MgeID: mge:1610 # MgeName: YS40 # Cross-refs: genbank:acc:YP_874016;genbank:gi:118197623;genbank:GeneID:4495919 Probab=100.00 E-value=1.4e-71 Score=409.07 Aligned_cols=389 Identities=11% Similarity=0.064 Sum_probs=275.6 Q ss_pred Ccchhh---Hhhccccc--cccc---ccccccccc-cchhhhhhhhc---CCCCcccchhhhhcchHHHHHHHHHHHhhh Q lcl|Aclame:pro 1 MILPIL---NFINQTND--PPEV---GSVQSYFPD-GNDAQIMESLL---GDNNEWVSARAALRNSDLFSIILQLSSDLA 68 (392) Q Consensus 1 m~Mg~~---~~~~~~~~--~~~~---~~~~~~~~~-~~~~~~~~~~~---~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia 68 (392) --.-|| +.+++..- |-+. .+....+.. +........+. ...+..++.+.++++++|++||++||++|| T Consensus 60 ~~~~~~~~~~~~kk~~i~~pfkkk~~~~~~d~f~~s~es~s~vtsls~pdaf~~vnVs~~~AlknsaV~scI~~IA~sIA 139 (945) T protein:vir:10 60 YSIIIFRKNQVLKKEKIIVPYNHQEPPFKFNLFEYSPESLMYLPSISDPDAFFLINLFRKYRFNNDSKLIKVSEIPKKLT 139 (945) T ss_pred eeeeeehhhhHHHhhcccccccccccchhhhhhhccCccceecccccCccceeeehhhhhhhhccHHHHHHHHHHHhhhc Confidence 111122 12122110 0000 000000000 00000011111 112345788999999999999999999999 Q ss_pred hCceeeeccccc-----------------cccccCCccCCHHH----HHHHHHHHHHHhCCeeEEEeeccCCceEEEEEe Q lcl|Aclame:pro 69 IVKINAEKKKNQ-----------------GIIDNPSTNANKHG----FWQSMFAQLLLGGEAFAYRWRNANGADMKWEYL 127 (392) Q Consensus 69 ~~p~~~~~~~~~-----------------~~~~~PN~~~s~~~----f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l 127 (392) ++|+++|++..+ .++.+||++||+++ |++.++.+++++||+|+++.|+.+|++++|||+ T Consensus 140 sLPlklYrr~edG~~~~~~kk~~~~hpL~~LL~rPNp~mT~~eFwqsFl~~Lv~dLLL~GNAYieIiRd~~G~ii~L~pL 219 (945) T protein:vir:10 140 SKELEIYKHIEDKHVNYYLKRIRDARNILEFLERPDPYFSEVNSWEYLLGMVLDDILTIDRGAIVKIRDEQGNLVAITPV 219 (945) T ss_pred cCceEEEEecccCcccccccccccchHHHHHHhCCCcccChhHHHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEE Confidence 999999875322 24679999999998 556688999999999999999999999999999 Q ss_pred ccccceeeecCccceEEEEEEecCcceeeeEEEeceeE-EEecCCCccccc--ccCCHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 128 RPSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQSDL-IHMKLLSIDGGK--TGISPLYSLRRESKIQRASDRLTISSL 204 (392) Q Consensus 128 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-ih~~~~~~~~~~--~G~s~~~~~~~~i~~~~~~~~~~~~~~ 204 (392) +|+.|++..+++++..+++....++ +....++++++ +|++++++++.. +|+||+.+++..+..+.++++++.++| T Consensus 220 dPs~Vti~~ddDG~~~y~Yv~~idG--~~~~~v~a~DvIlhirn~s~DG~~~GyGlSPIeaa~~aI~~alAaek~aar~F 297 (945) T protein:vir:10 220 DGTTIKPILSEDTGIVVGYVQEVDG--AIVAHFDKRDVVLFRQNLTPDVYMYGYSLPPIEILYKVILSDIFIDKGNLDYY 297 (945) T ss_pred CCcceEEEEcCCCcEEEEEEEecCC--ceEEEecCCceEEEeccCCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHH Confidence 9999999998888776554443332 33345666665 567777777643 699999999999999999999999999 Q ss_pred H-cCCCcceEEEeCCC----------CCch--HHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHH Q lcl|Aclame:pro 205 N-SSLNVPGVLTVKGG----------GLLS--DKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWT 271 (392) Q Consensus 205 ~-ng~~~~~il~~~~~----------~~~~--~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~ 271 (392) . ||++|+|++++++. ++++ ++.++.|.+.+.| .++|+++++++|++|++++.+++|+||+|+++++ T Consensus 298 skNGa~PsGILsvkg~~~~d~k~~~~LseEq~erlKe~wee~~sG-~NnG~piVLdeGmef~pLs~s~~DaQfLEsrkfs 376 (945) T protein:vir:10 298 RKGGSIPEGILAIEPPSYKEGDIYPQLSREQLESIQRQLQAIMMG-DYTQVPILSGGKFTWIDFKGKRRDMQFKELAEFV 376 (945) T ss_pred HhCCCccceEEEecCccccccccccccCHHHHHHHHHHHHHHhCC-cccccceecCCCceEEEccCChhHHHHHHHHHHH Confidence 5 78899999998643 2222 2334555566655 5677889999999999999999999999999999 Q ss_pred HHHHHHHhcccHHHcCCcccc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhcccchhhhhcchHHHHHH Q lcl|Aclame:pro 272 SKQYAKVYGLPDSYIGGQGDQ--QSSIQQISGMYASALNRYLRPAISELEYKLSD-----HISVNMRPAIDPLGDNYLST 344 (392) Q Consensus 272 ~~~Ia~~fgVP~~~lg~~~~~--~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~-----~~~~d~~~~~~~~~~~~~~~ 344 (392) +++||++|||||++||..++. ++.+++...|++++|+|++.+|+++|+++|.+ ++.++.......+.+++++. T Consensus 377 ~eeIArAFGVPP~lLG~~e~st~SNiEqq~~~Fv~~tL~Pil~~IEqeLNrkLl~~~eg~~i~fdFd~ldl~D~ksraEa 456 (945) T protein:vir:10 377 ARKICAVYQVSPQDVGILEGSNKATAEVMASLTKAKGLEPLMATISKGFDEVVSEFRNEKDIKLWFKEDDLEKERDWWNI 456 (945) T ss_pred HHHHHHHhCCCHHHcccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeEEEecchhccCHHHHHHH Confidence 999999999999999965443 23446788999999999999999999999854 24555555555677899999 Q ss_pred HHHHHhCCCcCHHHHHHHHHhCCCCccccccc--cCCCCCC-------------C--CCCCCCCC Q lcl|Aclame:pro 345 ISTATRWGALAENQATFVLQEAGYIPKDLPAP--ENTNKKT-------------T--GQSNEPVP 392 (392) Q Consensus 345 ~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~--e~~~~~~-------------~--gd~~~p~p 392 (392) +..++++|++|+||+|++++..+++.+|.... .+..|.. . ...++|.| T Consensus 457 l~kli~sGiLTiNEvRe~lGLpPIeGGD~lli~~nn~~P~d~~~ka~~ga~p~q~aq~~~dqp~~ 521 (945) T protein:vir:10 457 IQGQLNTGFRSINEARMEKGLEPVPWGDVPFSGLRNWKPEDEQAKAQQGAMPPQLAQAMADQPSQ 521 (945) T ss_pred HHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccccccccccccccccCCCCcccccCCCCCCCC Confidence 99999999999999999986555543343211 1111110 0 01112222 No 61 >protein:vir:95378 Length: 406 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1567 # MgeName: GBSV1 # Cross-refs: genbank:acc:YP_764474;genbank:gi:115334628;genbank:GeneID:5179265 Probab=100.00 E-value=3.1e-71 Score=407.14 Aligned_cols=371 Identities=12% Similarity=0.074 Sum_probs=289.0 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ-- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~-- 80 (392) ||||++|++.......... ......+....+..+..++...++++|+|++||++||++||++|++++++..+ T Consensus 1 Mg~f~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~ia~~ia~~~~~~~~~~~~~~ 74 (406) T protein:vir:95 1 MGLFDRWRRTKRKSKIRAD------TGYVGLFMSGEDVSFLVPGYVRLSDNPEVRMAVHKIADLISSMTIYLMQNTEDGD 74 (406) T ss_pred Ccchhhhcccccccccccc------chhhhhhccCcccCccccCHHHHhhcHHHHHHHHHHHHhhccCceEEEEecCCcc Confidence 9999998765433222111 11111222223334556778889999999999999999999999999875532 Q ss_pred ---------cccccCCccCCHHHHHHHHHHHHHHhCCe--eEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEe Q lcl|Aclame:pro 81 ---------GIIDNPSTNANKHGFWQSMFAQLLLGGEA--FAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITF 149 (392) Q Consensus 81 ---------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~--~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~ 149 (392) .++.+||++||+++||+.++.+++++|++ |+++.|+.+|++++|||++|+.|++..+.++. .+.+ T Consensus 75 ~~~~~~~~~~l~~~PN~~~t~~~f~~~~~~~~ll~g~g~a~~~~~~~~~g~~~~l~~i~~~~v~~~~~~~~~----~~~~ 150 (406) T protein:vir:95 75 IRIRNELSRKIDITPYSLMTRKSWMYNIVYTMLLDGEGNSVVFPKYTADGLIDELVPLTPSKVNFLDTPDGY----QVLY 150 (406) T ss_pred eeecchHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCceEEEEEEECCCCcEEEEEEEcCceeEEEEcCCeE----EEEe Confidence 35789999999999999999999999765 55677999999999999999999998887652 2222 Q ss_pred cCcceeeeEEEeceeEEEecCC-CcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH--HH Q lcl|Aclame:pro 150 DDPKIEPILQAPQSDLIHMKLL-SIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--KD 226 (392) Q Consensus 150 ~~~~~~~~~~~~~~~vih~~~~-~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~--~~ 226 (392) +. ..+++++|||++++ .+.+..+|+||+..+..++..+.++.++..++|+||++|+|++++++..++++ +. T Consensus 151 ~~------~~~~~~evih~~~~~~~~~~~~G~s~i~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~l~~e~~~~~ 224 (406) T protein:vir:95 151 GG------QTFNYDEVLHFIYNPDPERPYIGRGYRVVLKDIADNLKQATATKKSFMSGKYMPSLIVKVDAATAELSSEEG 224 (406) T ss_pred cc------EEEchhHEEEeeccCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCHHHHHHH Confidence 21 36899999999963 44455789999999999999999999999999999999999999998766654 44 Q ss_pred HHHHHHHHhccccCCceeeccC-CceEeecc-cChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHH Q lcl|Aclame:pro 227 KASRSRSFMKRSRSGGPVVLDD-LEEFTALE-IKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYA 304 (392) Q Consensus 227 ~~~~~~~~~~~~~~g~~~vl~~-g~~~~~l~-~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~ 304 (392) ++++.+.+.+..|+|+++|++. |.+++++. .+++|+||+|.+++++++||++|||||++||..+ .+.++..+|++ T Consensus 225 ~~~~~~~~~g~~n~~~~~v~~~~~~~~~~~~~~~~~d~q~~e~~~~~~~~Ia~~fgVp~~~lg~~~---~~~~~~~~~~~ 301 (406) T protein:vir:95 225 RNAVFKKYLQATEAGQPWIIPAELLEVEQVKPLSLKDIAINEAVELDKRTVAGMFGVPAFLLGIGE---FNRDEYNNFIN 301 (406) T ss_pred HHHHHHHhccccccCCceeecCCCccccccccCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCCCC---chHHHHHHHHH Confidence 6677888899999999988864 56777764 6899999999999999999999999999998532 34567789999 Q ss_pred HHHHHHHHHHHHHHHHHhhh----hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccccc-ccCC Q lcl|Aclame:pro 305 SALNRYLRPAISELEYKLSD----HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPA-PENT 379 (392) Q Consensus 305 ~~l~p~l~~i~~~l~~~l~~----~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~-~e~~ 379 (392) +||+|+++.|+++|+.+|+. +++||...+++.|.+++++.+..++++|++|+||+|++++..+.+..|... .-+. T Consensus 302 ~~l~P~~~~ie~~l~~~l~~~~~~~~~fd~~~l~~~d~~~~~~~~~~l~~~G~~t~NE~R~~~gl~p~~~gd~~~~~~n~ 381 (406) T protein:vir:95 302 STILPIAKGIEQELTRKLLISPDLYFKFNPRSLYAYDLKELAEVGSNMYVRGIMEGNEVRDWLGLSPKEGLSELVILENY 381 (406) T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEeechhhhcCCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCcceeeeccCc Confidence 99999999999999999974 478999999999999999999999999999999999998555443222111 1122 Q ss_pred CCC---------CCCCCCC-CCC Q lcl|Aclame:pro 380 NKK---------TTGQSNE-PVP 392 (392) Q Consensus 380 ~~~---------~~gd~~~-p~p 392 (392) .|+ ++|+.+. --+ T Consensus 382 ~~~~~~~~~~~~k~g~~~~~~~~ 404 (406) T protein:vir:95 382 IPLDKIGDQSKLKGGDNSGADGQ 404 (406) T ss_pred cchhhcccccccCCCCCCCCCCC Confidence 111 1111100 000 No 62 >protein:vir:6210 Length: 394 # NCBI annotation: Portal protein # Family: family:all:10882 # MgeID: mge:128 # MgeName: phBC6A52 # Cross-refs: genbank:acc:NP_852590;genbank:gi:31415850;genbank:GeneID:1489208 Probab=100.00 E-value=1.1e-70 Score=404.23 Aligned_cols=360 Identities=12% Similarity=0.065 Sum_probs=277.0 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ-- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~-- 80 (392) ||||++|++...+... . .......+......++..|+.+.++++++|++||++||++||+||+++++++.. T Consensus 1 MGl~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~vt~~~al~~~~v~~~i~~Ia~~iA~lp~~v~~~~g~~~ 73 (394) T protein:vir:62 1 MGLRDRFSNYLFKKAE--K-----RGYLDNVLGKSIRYSGVYVTDSNILQSSDVYELLQDISNQMVLADIVVEDEFGNEI 73 (394) T ss_pred CchhhhhhhhccCCCC--c-----hhhhhhhhhcccccCccccChhhhhccHHHHHHHHHHHHhhcccceEEEcCCCccc Confidence 9999999765422211 1 111222344445556788999999999999999999999999999999976432 Q ss_pred ------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcce Q lcl|Aclame:pro 81 ------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKI 154 (392) Q Consensus 81 ------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~ 154 (392) .++.+||++||+++||+.++.+++++||+|+++.++..+.+ ..|.+..++.+. +.+... T Consensus 74 ~~~~~~~Ll~~PN~~~t~~~f~~~~~~~lll~Gn~~~~i~~~~~~~~--------~~~~~~~~~~~~---~~~~~~---- 138 (394) T protein:vir:62 74 KDDIALQILRNPNNYLTQSEFIKLMTNTYLLEGETFPILNGAQIHLA--------SNVFTELDDNLV---EHFNIG---- 138 (394) T ss_pred chhhHHHHhccCCCCCCHHHHHHHHHHHHHhcCCeEEEEecceeecc--------ccceEEECCceE---EEEeeC---- Confidence 46789999999999999999999999999999976544322 345555554432 222221 Q ss_pred eeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH----HHHHHH Q lcl|Aclame:pro 155 EPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD----KDKASR 230 (392) Q Consensus 155 ~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~----~~~~~~ 230 (392) ..++++++|||+++++.++ ++|+||+..+..+|..+.++++++.++|+||++|+|++++++....++ +.++.+ T Consensus 139 --~~~~~~~eiih~r~~~~d~-~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~ 215 (394) T protein:vir:62 139 --GHEIPPCMIRHVKNIGADH-LRGKGILDLGRDTLEGVMSAEKTLTDKYKKGGLLTFLLNLDAHINPQNGAQSKLINAI 215 (394) T ss_pred --CEEechhheEEecCcCCCC-ccccChHHHHHHHHHHHHHHHHHHHHHHHccCCcceEEEeCCCCCcCHHHHHHHHHHH Confidence 2578999999999988766 689999999999999999999999999999999999999988765443 335667 Q ss_pred HHHHhccccCCceeeccCCc--eEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHH Q lcl|Aclame:pro 231 SRSFMKRSRSGGPVVLDDLE--EFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALN 308 (392) Q Consensus 231 ~~~~~~~~~~g~~~vl~~g~--~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~ 308 (392) .+.+.+..|+|+++|++.|. ++++++.++.|+||+|++++++++||++|||||.+||+.+ .++.+++..+|++.||. T Consensus 216 ~~~~~g~~n~g~~~vl~~g~~~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVPp~~lg~~~-~sn~e~~~~~~~~~~l~ 294 (394) T protein:vir:62 216 LDQLESIDEARSVKMIPLGKGYSIDTLKSPLDDEKTLAYLNVYKKDLGKFLGINVDTYTELI-KEDIEKAMMYIHNKAVR 294 (394) T ss_pred HHHhccccccCceeEeeCCCceeEEecCCCcchHHHHHHHHHHHHHHHHHhCCCHHHcCCCC-CcCHHHHHHHHHHHHHH Confidence 88888999999999997765 6668899999999999999999999999999999998653 33445678999999999 Q ss_pred HHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCc--cccccc-cC Q lcl|Aclame:pro 309 RYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIP--KDLPAP-EN 378 (392) Q Consensus 309 p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~--~e~~~~-e~ 378 (392) |++++|+++|+.+|+. .++||....++. .++++.+..++++|++|+||+|++++..+++. .+...+ -+ T Consensus 295 P~~~~ie~~l~~kll~~~~~~~~~~~fd~~~~~~~--~~~~~~~~~~~~~g~~T~NE~R~~~gl~p~~~~~gd~~~~~~n 372 (394) T protein:vir:62 295 PIMKNFEDHLSLLFYAQNSGKRIKFKINILDFVTY--SNKTNIGYNLVRTAITSPDNVADMLGFPKQNTKESQAIYISND 372 (394) T ss_pred HHHHHHHHHHhhhhcCccccCceEEEechhhhcCH--HHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCCeeecccc Confidence 9999999999999864 255666655544 46778889999999999999999985554421 111110 11 Q ss_pred C----------CCCCCCCCCCC Q lcl|Aclame:pro 379 T----------NKKTTGQSNEP 390 (392) Q Consensus 379 ~----------~~~~~gd~~~p 390 (392) + .+.+||+.|+= T Consensus 373 ~~~~~~~~~~~~~~kgge~~en 394 (394) T protein:vir:62 373 VTEIGKKEATDGSLGGGEENEN 394 (394) T ss_pred cccccccccccccCCCCCCCCC Confidence 1 22345555444 No 63 >protein:vir:4194 Length: 540 # NCBI annotation: putative portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:88 # MgeName: psiM100 # Cross-refs: genbank:acc:NP_071819;genbank:gi:11863102;genbank:GeneID:1257604 Probab=100.00 E-value=1.4e-67 Score=387.18 Aligned_cols=382 Identities=11% Similarity=-0.017 Sum_probs=272.4 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~ 80 (392) -.|.|-+..+-. ..+..... .......++.++...-+.....+.+..+++|++||++||++||++|++++.+... T Consensus 4 ~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~pp~~~~~La~~~~~n~~v~scI~~ia~~ia~~~~~i~~~~~~ 78 (540) T protein:vir:41 4 YHLSIKSLEKYR--AIKGDTDS---QALKEDRFEEYVEPKVHPLVLLSLLQVNPYHASACSIKANDILRTGYLIDGDDGG 78 (540) T ss_pred cccChhhccchh--hhhccccc---cccccCCCCccccCCCCHHHHHHHHHhcHHHHHHHHHHHHHHhcCCceEecCccc Confidence 222222211100 00001100 0111111222221100111123445578999999999999999999999988877 Q ss_pred cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCcc-------ceEEEEEEe---- Q lcl|Aclame:pro 81 GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE-------NGMYYNITF---- 149 (392) Q Consensus 81 ~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~-------~~~~~~~~~---- 149 (392) .....||++||+++||+.++.+++++||+|++++|+.+|++++|+|++|+.|++..+..+ ...++...+ T Consensus 79 ~~~~lpN~~~t~~~f~~~~v~dlll~Gnayv~i~r~~~G~~~~L~~i~~~~V~v~~~~~~~~~~~d~~~~~~~~~~~~~~ 158 (540) T protein:vir:41 79 VEELLRACRPSFEFILLQALEDLQVFNYCTLEVVRDDQGEPVRLDYIPAHTVRVHRDGSRYMQTWDGIHVTYFKDYRYEG 158 (540) T ss_pred hhhhccCCCCCHHHHHHHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCcceEEeEcCceeEeeecCceeeeeecccccc Confidence 777789999999999999999999999999999999999999999999999998765432 111111111 Q ss_pred --cCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH--- Q lcl|Aclame:pro 150 --DDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD--- 224 (392) Q Consensus 150 --~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~--- 224 (392) ....+.....+++++|||++..++.+..+|+||+..+..++..+.++++++.++|+||++|+|+|++++...++. T Consensus 159 ~~~~~~g~~~~~~~~~eViHir~~~~~~~~~G~Spi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~giL~~~g~l~~e~~~~ 238 (540) T protein:vir:41 159 EVNPDNGEDQDGVGANEIIFIHLPSPICSYYGVPRYLSAAPSILAMQKIDEYNYAFFDNYTIPSYVITVTGEFEDEMELG 238 (540) T ss_pred eeeccccccceeecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCcccCchhccc Confidence 111233456799999999999888888899999999999999999999999999999999999999987654432 Q ss_pred -----HHHH----HHHHHHhc-cccCCceeecc------CCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCC Q lcl|Aclame:pro 225 -----KDKA----SRSRSFMK-RSRSGGPVVLD------DLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGG 288 (392) Q Consensus 225 -----~~~~----~~~~~~~~-~~~~g~~~vl~------~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~ 288 (392) +.++ .+...+.+ ..|+|+++||+ +|++|++++.+++|+||+|++++++++||++|||||++||. T Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~nag~~~vLe~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~~eIa~afgVPp~~lG~ 318 (540) T protein:vir:41 239 SDGEPTGRTVLQGLIEDNFKYLKEAPHTPLVFSIPGGDTVEVTFTPLNTSQKELSFREYAAEKKHDIAAAHMIDPYRLGI 318 (540) T ss_pred hHHHHHHHHHHHHHHHHHhccccccccceEEEecCCCcccceeEEecccchhHHHHHHHHHHHHHHHHHHhCCCHHHcCc Confidence 1122 23333344 35789999985 79999999999999999999999999999999999999996 Q ss_pred ccccc---ch-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHH Q lcl|Aclame:pro 289 QGDQQ---SS-IQQISGMYASALNRYLRPAISELEYKLSDH------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQ 358 (392) Q Consensus 289 ~~~~~---~~-~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE 358 (392) ...++ ++ .++...|+.+||.|+++.|+++|+.+|.++ ++||...+++.+ .++.+..++++|++|+|| T Consensus 319 ~~~~~~n~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~~~~~i~f~~~~ll~~D---~~~~~~~lv~~G~lT~NE 395 (540) T protein:vir:41 319 TDVGPLGGNFAEVARRTYYESVVRPQQEIVSSVLTDFIQLKLDPGARFVFNEEILMESE---FVHNYALLVQCGVLTPSE 395 (540) T ss_pred ccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCceEEEecchhhcchH---HHHHHHHHHhCCCCCHHH Confidence 53322 33 456788999999999999999999998654 456666666554 455677899999999999 Q ss_pred HHHHHHhCCCCccccccccCCCC----CCCCCCC----CCCC Q lcl|Aclame:pro 359 ATFVLQEAGYIPKDLPAPENTNK----KTTGQSN----EPVP 392 (392) Q Consensus 359 ~R~~l~~~g~~~~e~~~~e~~~~----~~~gd~~----~p~p 392 (392) +|+.| .|++|.+.+.+..++. ..+++.+ +|.+ T Consensus 396 ~Re~L--~g~e~gdd~~l~p~n~~~~~~~~~~~~~~~~~~~~ 435 (540) T protein:vir:41 396 VREKL--FGLDGGPDMFMVPSSIGKSAMKRQKRNYEKNQINE 435 (540) T ss_pred HHHHh--CcCcCCCcccccccccccccccccccccCCCCccc Confidence 99865 4666654433322211 1122211 1211 No 64 >protein:vir:4156 Length: 542 # NCBI annotation: portal protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:87 # MgeName: psiM2 # Cross-refs: genbank:acc:NP_046965;genbank:gi:9630535;genbank:GeneID:1261709 Probab=100.00 E-value=3.1e-66 Score=379.76 Aligned_cols=378 Identities=11% Similarity=-0.021 Sum_probs=271.0 Q ss_pred hhHhh---cccccccccccccccccccchhhhhhhhcCCCCcccchh----hhhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 5 ILNFI---NQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSAR----AALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 5 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----~a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) +|+.. +...++.+....+..........+..++ .-+++.. ....+++|++||++||++||++|++++++ T Consensus 1 ~~~~~~~i~s~~~~~~i~~~~~~s~~~~~~~~~~~~----~pp~~~~~la~l~~~n~~v~scI~~ia~~IA~l~~~~~~~ 76 (542) T protein:vir:41 1 MFNYHLSIRSLEKYKAIKREEVESQALGETRFEEYV----EPKVNPLVLLSLLQVNPYHASACSIKANDIIRTGYILEGD 76 (542) T ss_pred CccccccccccccchhhhhccccccccccccCCccc----cCCCCHHHHHHHHhhcHHHHHHHHHHHHHHhhCceeeecc Confidence 66522 2222222111111100000000111111 1123333 33457999999999999999999999876 Q ss_pred ccccc-cccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceE-------EEEEEe Q lcl|Aclame:pro 78 KNQGI-IDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGM-------YYNITF 149 (392) Q Consensus 78 ~~~~~-~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~-------~~~~~~ 149 (392) +...+ ...||++||+++|++.++.+++++||+|++++|+.+|++++|+|++|+.|++..+.+.... .++..+ T Consensus 77 ~~~~l~~~lpN~~~s~~~f~~~~v~~lll~Gnayi~i~rd~~G~~~~L~~l~~~~v~v~~d~~~~~~~~~~~~~~~~~~y 156 (542) T protein:vir:41 77 DEGVVDEFIRACKPSFEYVLLRALEDLQVFNYCTLEVVRDDRGDPIRFEYIPSHTIRVHKDGSRYRQTWDGVNITHFKDY 156 (542) T ss_pred cchhhhhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEEcCCCcEEEEEEEcCcceEEEEcCCeeEeeecCCcceeEEee Confidence 65443 4579999999999999999999999999999999999999999999999999876543111 111111 Q ss_pred c------CcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch Q lcl|Aclame:pro 150 D------DPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS 223 (392) Q Consensus 150 ~------~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~ 223 (392) . ...+.....+++++|||++.+++.+..+|+||+..+..++..+.++.+++.++|+||++|+|||++++...++ T Consensus 157 ~~~~~~~~~~g~~~~~~~~~eIiHir~~~~~~~~~Glspi~~~~~~i~~~~~~~~~~~~~f~Ng~~p~gIL~~~~~l~de 236 (542) T protein:vir:41 157 RYEGEINPETGEDQDSVGANELVFIHIPSPVCSYYGVPRYVSAAPAILAMQKIDEYNYAFFDNYTIPSYVITVTGEFEDE 236 (542) T ss_pred cccccccccccccccccCcccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEeCCccccc Confidence 1 1122233468889999999988777789999999999999999999999999999999999999997643221 Q ss_pred ------------HHHHHHHHHHHhcc-ccCCceeecc------CCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHH Q lcl|Aclame:pro 224 ------------DKDKASRSRSFMKR-SRSGGPVVLD------DLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDS 284 (392) Q Consensus 224 ------------~~~~~~~~~~~~~~-~~~g~~~vl~------~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~ 284 (392) ++.++.|.+.+.+. .|+|+++||+ +|++|++++.+++|+||+|++++++++||++|||||+ T Consensus 237 ~~~~~~~~~e~~~~lk~~~~~~~~g~~~n~gk~~vL~~~~~~~~g~~~~pl~~~~~d~qfle~~~~~~~~Ia~afgVPp~ 316 (542) T protein:vir:41 237 LEEDPDGNPTGRTVIQALIEDNFKHLKEAPHTPLVFSIPGGDTVKVTFTPLNTSQKELSFREYAAEKKYDIAAAHMIDPY 316 (542) T ss_pred cccccccCHHHHHHHHHHHHHHHhhhhcccCceeEeeccCCcccceeEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHH Confidence 12344566666665 5788899984 7999999999999999999999999999999999999 Q ss_pred HcCCccccc----chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh------hcccchhhhhcchHHHHHHHHHHHhCCCc Q lcl|Aclame:pro 285 YIGGQGDQQ----SSIQQISGMYASALNRYLRPAISELEYKLSDH------ISVNMRPAIDPLGDNYLSTISTATRWGAL 354 (392) Q Consensus 285 ~lg~~~~~~----~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~ 354 (392) +||..++++ +.+++...|++.||.|+++.|+++|+.+|.+. ++|+...+++.| .+..+..++++|++ T Consensus 317 ~lG~~~~~t~n~sn~Eq~~~~f~~~tL~P~~~~ie~~ln~~L~~~~~~~~~~~f~~~~ll~~d---~~~~~~~~v~~Gil 393 (542) T protein:vir:41 317 RLGIADTGPLGGNFAEVTRRTYYESVVRPQQNIISSILTDFFQVKFNPKTRFKFNDETLLESD---SVRNCALLVQSGVL 393 (542) T ss_pred HhCcCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCceEEEecchhhcchH---HHHHHHHHHhCCCC Confidence 999754432 23467899999999999999999999998754 345555555443 45567789999999 Q ss_pred CHHHHHHHHHhCCCCccccccccCCC----CCCCCCCCCCCC Q lcl|Aclame:pro 355 AENQATFVLQEAGYIPKDLPAPENTN----KKTTGQSNEPVP 392 (392) Q Consensus 355 T~nE~R~~l~~~g~~~~e~~~~e~~~----~~~~gd~~~p~p 392 (392) |+||+|+.| .|++|.+.+.+...+ .+.+++. ++.+ T Consensus 394 T~NE~Re~L--~g~~pgdd~~l~p~~~~~~~~~~~~~-n~~~ 432 (542) T protein:vir:41 394 TPAEARERL--FGLDGGPDIFMVPSKGAAKSVKRQER-NYEK 432 (542) T ss_pred CHHHHHHhh--CCCCCCCccccccccccccccccCCc-CCCC Confidence 999999855 467665544332221 1122221 1222 No 65 >protein:vir:80644 Length: 551 # NCBI annotation: gp23 # Family: family:all:2446 # MgeID: mge:1883 # MgeName: A511 # Cross-refs: genbank:acc:YP_001468463;genbank:gi:157325038;genbank:GeneID:5601615 Probab=100.00 E-value=7.3e-66 Score=377.69 Aligned_cols=386 Identities=10% Similarity=0.012 Sum_probs=266.2 Q ss_pred CcchhhHhhccccccc-------------------------------ccccccccccccchhhhhhhhcCCCCccc---- Q lcl|Aclame:pro 1 MILPILNFINQTNDPP-------------------------------EVGSVQSYFPDGNDAQIMESLLGDNNEWV---- 45 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---- 45 (392) =+||||+.++...... +......+...+. -+........... T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~a~~~~~~~~~---~~~~~~~~r~~~~~~~~ 79 (551) T protein:vir:80 3 NKLGLFESIRLVGVNKSDAVKHIEVDDNYSIAIQQREQEQISKAMNNKEVAYSQPVIGSM---SANPGFKTKPSIRNNQD 79 (551) T ss_pred hhhhhHHHhhhccCChhhcccccccccceeeecccccHHHHHHhhccCcceeecccccce---ecCcccccCccccChhH Confidence 6799998877311100 0000111111000 0000000000111 Q ss_pred ---chhhhhcchHHHHHHHHHHHhhhhC-----------ceeeecccc---------------ccccccCCcc-----CC Q lcl|Aclame:pro 46 ---SARAALRNSDLFSIILQLSSDLAIV-----------KINAEKKKN---------------QGIIDNPSTN-----AN 91 (392) Q Consensus 46 ---~~~~a~~~~~v~~~i~~ia~~ia~~-----------p~~~~~~~~---------------~~~~~~PN~~-----~s 91 (392) ..+.+..+|.|++||+.||++||++ ++.+.-++. ..++.+||++ +| T Consensus 80 l~~~~~~~~~npiv~~~I~~ia~~IA~~~~~~~~~~~g~~~~i~~kd~~~~~~~~~~~~~~~i~~~l~~pn~~~~p~~~s 159 (551) T protein:vir:80 80 LHGVLKKFGGNIILNAIINTRSNQVSMYCKPARHSEKGVGFEVRLKDLDKKPTSHDEATIKRIESFIEKTGVDNDINRDS 159 (551) T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHhhhhhhhhhhcCCCCceEEecccCcccChhHHHHHHHHHHHHHhcCCCCCCccch Confidence 1123456799999999999999984 444322111 1245688877 58 Q ss_pred HHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceE---EEEEEecCcceeeeEEEeceeEEEe Q lcl|Aclame:pro 92 KHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGM---YYNITFDDPKIEPILQAPQSDLIHM 168 (392) Q Consensus 92 ~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~vih~ 168 (392) +.+|++.++.+++++||+|++++|+.+|+|++||||+|++|++..+.++... .++++... ++....+++++|||+ T Consensus 160 ~~~f~~~lv~dlll~Gnay~~i~rd~~G~~~~L~~l~p~~V~v~~~~~g~~~~~~~~y~~~~~--g~~~~~~~~~eiiH~ 237 (551) T protein:vir:80 160 FSSFVKKIVRDTYMYDQVNFEKVFNRNQSMVRFVAKDPTTIFFATTADGKIPDNGNRFVQVID--QKIVATFNAREMAFA 237 (551) T ss_pred HHHHHHHHHHHHHhcCCEEEEEEECCCCcEEEEEEeCCceeEEEECCccccccCceEEEEEeC--CcEEEEEcccceEEe Confidence 8999999999999999999999999999999999999999999988877532 12222222 344568999999999 Q ss_pred cCCCcc---cccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC--Cch--HHHHHHHHHHHhccccCC Q lcl|Aclame:pro 169 KLLSID---GGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG--LLS--DKDKASRSRSFMKRSRSG 241 (392) Q Consensus 169 ~~~~~~---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~--~~~--~~~~~~~~~~~~~~~~~g 241 (392) ++++.. +..+|+||+..++.+|..+.++++++.++|+||++|+|+|+++++. +++ ++.++.|...+.|..|+| T Consensus 238 ~~n~~~~~~~~~~G~spi~~a~~~i~~~~a~~~~~~~~f~Ng~~p~giL~~~~~~~lt~e~~~~lk~~~~~~~~G~~nag 317 (551) T protein:vir:80 238 VRNPRSDIYATGYGYPELEIALKQFIAHENTEAFNDRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSW 317 (551) T ss_pred cccCCCCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEcCCCCCCHHHHHHHHHHHHHHhcCccccC Confidence 976533 3467999999999999999999999999999999999999987543 333 234666777888999999 Q ss_pred ceeec-cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc-----------cchH-HHHHHHHHHHHH Q lcl|Aclame:pro 242 GPVVL-DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ-----------QSSI-QQISGMYASALN 308 (392) Q Consensus 242 ~~~vl-~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~-----------~~~~-~~~~~~~~~~l~ 308 (392) ++++| ++|++|++++++++|+||+|++++++++||++|||||++||..+++ .++. ++...|++.||. T Consensus 318 ~~~vl~~~g~~~~~l~~~~~D~qfle~~~~~~~~Ia~aFgVPp~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~f~~~tL~ 397 (551) T protein:vir:80 318 QIPVVSAEDVKFVNMTPSARDMEFEKWLNYLINVISALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQ 397 (551) T ss_pred ccccccCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhcCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHH Confidence 98666 6899999999999999999999999999999999999999965432 2333 456789999999 Q ss_pred HHHHHHHHHHHHHhhhhh----cccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCC-Ccccccc-ccCCCCC Q lcl|Aclame:pro 309 RYLRPAISELEYKLSDHI----SVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGY-IPKDLPA-PENTNKK 382 (392) Q Consensus 309 p~l~~i~~~l~~~l~~~~----~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~-~~~e~~~-~e~~~~~ 382 (392) |+++.|+++|+.+|++.+ .|++......+..+.+. +..++.+|++|+||+|++++..+. +..|... .-++.+. T Consensus 398 P~~~~ie~~ln~~L~~~~~~~~~f~f~~~~~~~~~~~~~-~~~~~~~g~lT~NE~R~~~gl~P~~egGD~~~~~~~~~~~ 476 (551) T protein:vir:80 398 PLLGFIEDFINKHIVAEFGDKYTFQFVGGDIKSELESVK-ILAEKAKVAMTVNEVRKELNLPGDVIGGDIPLNGVIVQRI 476 (551) T ss_pred HHHHHHHHHHHhhhccccCCceEEEeeccChhhHHHHHH-HHHHHhcCCcCHHHHHHHhCCCCCCCCCceeecccccccc Confidence 999999999999997643 33333332333333333 445777899999999998854442 2223221 0011110 Q ss_pred ------------------------CCCCCCCCCC Q lcl|Aclame:pro 383 ------------------------TTGQSNEPVP 392 (392) Q Consensus 383 ------------------------~~gd~~~p~p 392 (392) .+++++.+.| T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (551) T protein:vir:80 477 GQLMQQEQFEHEKQQSNLQMLQEQTGNRVSTDVE 510 (551) T ss_pred cccccccCcchhhhhhccccccCcCCCCCCCCCC Confidence 1111112222 No 66 >protein:vir:9359 Length: 348 # NCBI annotation: head portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:166 # MgeName: phi 12 # Cross-refs: genbank:acc:NP_803337;genbank:gi:29028648;genbank:GeneID:1258089 Probab=100.00 E-value=2.8e-65 Score=374.52 Aligned_cols=318 Identities=15% Similarity=0.137 Sum_probs=257.7 Q ss_pred hhhCceeeecccc-------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCc Q lcl|Aclame:pro 67 LAIVKINAEKKKN-------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEY 139 (392) Q Consensus 67 ia~~p~~~~~~~~-------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~ 139 (392) ||+||++++++.. +.++.+||++||+++||+.++.+++++||+|++++|+.+|+|++|||++|+.|++..+.+ T Consensus 1 ia~lp~~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~~~i~r~~~G~~~~L~~l~~~~v~~~~~~~ 80 (348) T protein:vir:93 1 MASLPLKMYEDYKVVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQ 80 (348) T ss_pred CcccceEeEecCcCcccHHHHHHHhCCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEEcCCceEEEEeCC Confidence 9999999987653 234579999999999999999999999999999999999999999999999999999988 Q ss_pred cceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC Q lcl|Aclame:pro 140 ENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG 219 (392) Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~ 219 (392) ++.++|.+...+ +..+.+++++|||++++++.+..+|+||+..++.++..+.+++++. ++.++..++++++.++. T Consensus 81 ~~~~~y~~~~~~---g~~~~~~~~eiih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~i~~~~~~ 155 (348) T protein:vir:93 81 SRELYYSIHAAT---GNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFN--LTEMQKPDSFMLKYGSN 155 (348) T ss_pred CcEEEEEEEcCC---CeEEEEccccEEEecCCCCCCceeeccHHHHHHHHHHHHHHHHHHH--HHhcCCCceeEEecCCC Confidence 888877665443 3457899999999999877788899999999999999999998885 44444455677777766 Q ss_pred CCchHH--HHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc--cch Q lcl|Aclame:pro 220 GLLSDK--DKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ--QSS 295 (392) Q Consensus 220 ~~~~~~--~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~--~~~ 295 (392) .++++. .++++.+.+ .|+|+++++++|++|++++++++|+||+|++++++++||++|||||++||+.+++ .+. T Consensus 156 l~~e~~~~~~~~~~~~~---~n~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~ 232 (348) T protein:vir:93 156 VSTEKRQQVLEDFKQYY---EENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSIFLNARSNTNFAKN 232 (348) T ss_pred CCHHHHHHHHHHHHHHh---hcCCCeeecCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccH Confidence 555432 233444433 4778999999999999999999999999999999999999999999999975443 244 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCC Q lcl|Aclame:pro 296 IQQISGMYASALNRYLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAG 367 (392) Q Consensus 296 ~~~~~~~~~~~l~p~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g 367 (392) +++.+.|+++||+|+++.|+++|+.+|++ +++||...+++.|.+++++.+.+++++|++|+||+|++++..| T Consensus 233 e~~~~~~~~~~l~P~~~~ie~~l~~~l~~~~~~~~g~~i~fd~~~l~~~d~~~~a~~~~~~~~~G~~T~NE~R~~~g~~p 312 (348) T protein:vir:93 233 EELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKNRYFKFNVKSYLRADSATQAEVYFKAVRSGYYTINDIREWEDLPP 312 (348) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCcceEEeechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCC Confidence 56788999999999999999999999864 3688899999999999999999999999999999999986665 Q ss_pred CCccccccc-cCCCC----------CCCCCCCCCCC Q lcl|Aclame:pro 368 YIPKDLPAP-ENTNK----------KTTGQSNEPVP 392 (392) Q Consensus 368 ~~~~e~~~~-e~~~~----------~~~gd~~~p~p 392 (392) ++..|.... -++.| ..|||+|.--= T Consensus 313 ~~ggD~~~~~~n~~~~~~~~~~~~~~~gg~~n~~~~ 348 (348) T protein:vir:93 313 VEGGDKPLISGDLYPIDTPLELRKSLKGGDKNVNES 348 (348) T ss_pred CCCcCeEeecccccccccchhhcccccCCCCCcCCC Confidence 543333221 12222 23333221111 No 67 >protein:vir:95965 Length: 385 # NCBI annotation: ORF011 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1594 # MgeName: 2638A # Cross-refs: genbank:acc:YP_239800;genbank:gi:66395461;genbank:GeneID:5132882 Probab=100.00 E-value=2.4e-65 Score=374.85 Aligned_cols=354 Identities=15% Similarity=0.145 Sum_probs=267.1 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ-- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~-- 80 (392) ||||++++++...+... .+ ... ...++.+.++++++|++||++||+++|++|++++++... T Consensus 1 Mg~f~~~f~~~~~~~~~---------~~---~~~-----~~~~~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~~ 63 (385) T protein:vir:95 1 MGLFDSVFKRHSELSWM---------YD---LEF-----LQDKSKKAYLKQIALNTVVEMVARTISQSEFRVMKNNTKEK 63 (385) T ss_pred CchhhhhhccCcccccc---------cc---hhh-----hhccchhhhhhhHHHHHHHHHHHHHHcccceeeeecCcccc Confidence 99999887654322110 01 111 224677889999999999999999999999999976532 Q ss_pred -----cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCccee Q lcl|Aclame:pro 81 -----GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIE 155 (392) Q Consensus 81 -----~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 155 (392) .++.+||++||+++||+.++.+++++||||+++.++. +.+..++++.+..+....+. ++.....+ .+ T Consensus 64 ~~l~~lL~~~PN~~~t~~~f~~~~~~~l~l~Gna~i~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~ 135 (385) T protein:vir:95 64 GTLYYLLNVRPNRNQNAVDFWQKFIFKLIMDNEVLVVKNDEG-HFFVADDFEKEDELGLYSHR-----FTNVLVND--FE 135 (385) T ss_pred chHHHHHhcccCcCCCHHHHHHHHHHHHhhcCceEEEEecCC-Ceeecccccccccccccccc-----ceeeeecc--cc Confidence 2457999999999999999999999999999887654 45566666666666554332 22222222 23 Q ss_pred eeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH----HHHHHHH Q lcl|Aclame:pro 156 PILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD----KDKASRS 231 (392) Q Consensus 156 ~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~----~~~~~~~ 231 (392) ....+++++|||+++++.++..+|.||+..+...+..+.++.. +++.|+|+++++......+ +.++.+. T Consensus 136 ~~~~~~~~eiih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~-------~~~~~~g~l~~~~~~~~~~e~~~~~~~~~~ 208 (385) T protein:vir:95 136 FKRVFTMDDVIYLKYNNQKLDAFSLGLFEDYGEIFGRMIDLQM-------LNNQIRGILKVDATKFYNKEKQKELQAYID 208 (385) T ss_pred eeeeeccccEEEecCCCCCcccccchHHHHHHHHHHHHHHHHH-------hcCCCceEEEeCCccCCCHHHHHHHHHHHH Confidence 4567999999999999998888999999999998877655432 3345889999875433222 2244455 Q ss_pred HHHhcccc-CCceeeccCCceEeeccc------ChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHH Q lcl|Aclame:pro 232 RSFMKRSR-SGGPVVLDDLEEFTALEI------KSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYA 304 (392) Q Consensus 232 ~~~~~~~~-~g~~~vl~~g~~~~~l~~------~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~ 304 (392) +.+.+..+ .++++++++|++|+++++ ++.|+||+|++++++++||++|||||++|++ +.++.+++.++|++ T Consensus 209 ~~~~g~~~~~~~i~~l~~g~~~~~l~~~~~~~~s~~d~~~~e~~~~~~~~Ia~~fgVpp~~l~~--~~sn~e~~~~~~~~ 286 (385) T protein:vir:95 209 TLFDAFQNNTIAVVPLTEGLAYEEHSNRGAAQSAQQFSELNELKKTVLTDVARMIGVPPSLVLG--EMADLEKTIESYLQ 286 (385) T ss_pred HHhhhhhhcCCceEEcCCCceeEeecccccccCCHHHHHHHHHHHHHHHHHHHHhCCCHHHhcC--CCcCHHHHHHHHHH Confidence 66666644 556889999999999985 5679999999999999999999999999964 44555678999999 Q ss_pred HHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCC-c-ccccc Q lcl|Aclame:pro 305 SALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYI-P-KDLPA 375 (392) Q Consensus 305 ~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~-~-~e~~~ 375 (392) .||.|++.+|+++|+.+|++ +++||...+++.|.+++++.+..++++|++|+||+|++++..+++ + .|... T Consensus 287 ~~l~P~~~~ie~~l~~~L~~~~~~~~~~~~fd~~~l~~~D~~~~~~~~~~~~~~g~lt~NE~R~~~g~~p~~~~~gd~~~ 366 (385) T protein:vir:95 287 FCINPLLRKIEAELNSKFFYQDEYLNDDMHIKVVGIDKRDPLKLSEAIDKLVASGTFTRNQVRIMTGEEPADDPELDKFI 366 (385) T ss_pred HHHHHHHHHHHHHHHhhcCChhhcccceEEEechhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceee Confidence 99999999999999999865 478999999999999999999999999999999999998544442 1 12221 Q ss_pred c-cC---CCCCCCCCCCCC Q lcl|Aclame:pro 376 P-EN---TNKKTTGQSNEP 390 (392) Q Consensus 376 ~-e~---~~~~~~gd~~~p 390 (392) . -+ ....+||+.++- T Consensus 367 ~~~n~~~~~~~kgge~~~e 385 (385) T protein:vir:95 367 ITKNLQSADAFKGGESNEE 385 (385) T ss_pred ecccceecccccCCCCCCC Confidence 1 12 223456666555 No 68 >protein:vir:80796 Length: 574 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1885 # MgeName: phiEF24C # Cross-refs: genbank:acc:YP_001504121;genbank:gi:158079308;genbank:GeneID:5666445 Probab=100.00 E-value=1.9e-64 Score=369.92 Aligned_cols=387 Identities=11% Similarity=0.022 Sum_probs=263.9 Q ss_pred CcchhhHhh--------------cccccccccccccccc-----------------cccchhhhhhhhcCCCCcccchhh Q lcl|Aclame:pro 1 MILPILNFI--------------NQTNDPPEVGSVQSYF-----------------PDGNDAQIMESLLGDNNEWVSARA 49 (392) Q Consensus 1 m~Mg~~~~~--------------~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~v~~~~ 49 (392) -.|++-+-- .+..+... .++..++ +...-...+..+. .+..+..-. T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~iv~~~i 101 (574) T protein:vir:80 25 YKMHLREIDTNVVNNEPYSMESIEKGMNGKT-TAYMQPIIGEMSVNPGYKTKPSIRNSQDLHKTLKKFG--NNIILNAII 101 (574) T ss_pred hccccchhhhhhhhccCCCHHHHHHhHhhhc-ccccchhhhhccccccccCcCccCCcccHHHHHHhhc--cChhHHHHH Confidence 222222111 00000000 0000000 0000011111111 122234445 Q ss_pred hhcchHHHHHHHHHHHhhhhCceeeeccccc---------------ccc----ccCCccC-CHHHHHHHHHHHHHHhCCe Q lcl|Aclame:pro 50 ALRNSDLFSIILQLSSDLAIVKINAEKKKNQ---------------GII----DNPSTNA-NKHGFWQSMFAQLLLGGEA 109 (392) Q Consensus 50 a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~---------------~~~----~~PN~~~-s~~~f~~~~~~~l~l~Gn~ 109 (392) .++..+|++|+.+|++++|+|||+++.++.+ .++ ..|||.+ |+.+|++.++.+++++||+ T Consensus 102 ~~~~~~V~~~~~~i~~~ia~lp~~i~~kd~~~~~~~~~~~~~~~l~~ll~~~~~~~nP~~~s~~ef~~~lv~~lll~Gna 181 (574) T protein:vir:80 102 NTRSNQVSMYCKPARNSETGVGYEIRLKDIEAEPTSHDIANIKRIESFLENTAQFRDPNRDNFTTFCKKLVRATYMYDQV 181 (574) T ss_pred HHHHHHHHHHHHHHHhhhccCceEEEEeccCCCccchhhhhhhHHHHHHhccCCCCCCccccHHHHHHHHHHHHHhcCCe Confidence 6677889999999999999999999865321 111 2466664 8889999999999999999 Q ss_pred eEEEeeccCCceEEEEEeccccceeeecCccceE---EEEEEecCcceeeeEEEeceeEEEecCCCccc---ccccCCHH Q lcl|Aclame:pro 110 FAYRWRNANGADMKWEYLRPSQVNTYYFEYENGM---YYNITFDDPKIEPILQAPQSDLIHMKLLSIDG---GKTGISPL 183 (392) Q Consensus 110 ~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~---~~~G~s~~ 183 (392) |++++|+.+|+|++||||+|..|++..+.++... ..++++. .++....+++++|||+++++..+ ..+|+||+ T Consensus 182 yi~i~r~~~G~~~~L~pl~p~~V~v~~d~~~~~~~~~~~y~~~~--~g~~~~~~~~~eiih~~~~~~~~~~~~~~G~spi 259 (574) T protein:vir:80 182 NFEKVFDKDGNFIKFDTVDPTTIFLATNGEGKLIKNGERFVQVI--DNRIVAKFNERELAFAVRNPRADIEVGQYGYPEL 259 (574) T ss_pred EEEEEECCCCcEEEEEEEcCceeEEEEcCccccccCceEEEEEe--CCceEEEEccccEEEEeccCCCCcccccccccHH Confidence 9999999999999999999999999887665321 1122222 23456789999999999765443 45799999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC--Cch--HHHHHHHHHHHhccccCCcee-eccCCceEeecccC Q lcl|Aclame:pro 184 YSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG--LLS--DKDKASRSRSFMKRSRSGGPV-VLDDLEEFTALEIK 258 (392) Q Consensus 184 ~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~--~~~--~~~~~~~~~~~~~~~~~g~~~-vl~~g~~~~~l~~~ 258 (392) ..++.+|..+.++++++.++|+||++|+|||+++.+. +++ ++.++.|.+.+.|..|+|+++ ++++|++|++++++ T Consensus 260 ~~a~~~i~~~~~a~~~~~~~f~ng~~p~gil~~~~~~~ls~e~~~~lk~~~~~~~~G~~n~g~~~vl~~~G~~~~~l~~s 339 (574) T protein:vir:80 260 EIALKQFIAHENTEVFNDRFFSHGGTTRGILHVKTGQQQSQQALDIFRREWRSSLAGINGSWQIPVVSAEDVKFVNMTPS 339 (574) T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceeecCCCceEEEccCC Confidence 9999999999999999999999999999999987643 333 244566778889999999965 45789999999999 Q ss_pred hhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-----------c-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh Q lcl|Aclame:pro 259 SNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-----------S-SIQQISGMYASALNRYLRPAISELEYKLSDHI 326 (392) Q Consensus 259 ~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-----------~-~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~~ 326 (392) ++|+||+|++++++++||++|||||++||..++++ + .+++...|++.||.|+++.|+++|+.+|++.+ T Consensus 340 ~~D~qfle~~~~~~~~Ia~afgVPp~~lG~~~~~t~~gs~~~~~n~sn~E~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~ 419 (574) T protein:vir:80 340 ANDMQFEKWLNYLINVISALYGIDPAEINFPNNGGATGSKGGSLNEGNSKEKMQASQNKGLQPLLRFIEDTVNTYIVAEF 419 (574) T ss_pred hhHHHHHHHHHHHHHHHHHHhCCCHHHhcccccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc Confidence 99999999999999999999999999999755432 2 34567899999999999999999999998654 Q ss_pred cccchhhhh-cchHHH--HHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccc-cCCCCC-------------------- Q lcl|Aclame:pro 327 SVNMRPAID-PLGDNY--LSTISTATRWGALAENQATFVLQEAGYIPKDLPAP-ENTNKK-------------------- 382 (392) Q Consensus 327 ~~d~~~~~~-~~~~~~--~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~-e~~~~~-------------------- 382 (392) +......|. .+.... ...+..++++|++|+||+|++++..+++..|.... -++.++ T Consensus 420 ~~~~~~~f~~~d~~~~~~~~~~~~~~~~G~lT~NE~R~~lgl~Pi~gGD~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~ 499 (574) T protein:vir:80 420 GEKYQFQFRGGDLSAQLDKLKIIEQEGKVFRTVNEIRHDKGLEPIKGGDVILNGVHIQAIGQALQEEQLEYQRSQDRLNR 499 (574) T ss_pred CCceEEEecccchhhHHHHHHHHHHHhCCccCHHHHHHHhCCCCCCCCCEeeeccceeecccccccccCCccchhccccc Confidence 322222222 122222 22344577899999999999986666543332211 011111 Q ss_pred ----CCCCCCCCCC Q lcl|Aclame:pro 383 ----TTGQSNEPVP 392 (392) Q Consensus 383 ----~~gd~~~p~p 392 (392) .+++...|.| T Consensus 500 ~~~~~~~~~~~~~~ 513 (574) T protein:vir:80 500 LLELSGGDVEQPEP 513 (574) T ss_pred cccccCCCCCCCCC Confidence 1111111211 No 69 >protein:vir:63755 Length: 547 # NCBI annotation: gp14 # Family: family:all:2446 # MgeID: mge:1517 # MgeName: P100 # Cross-refs: genbank:gi:82547619;genbank:GeneID:3783506 Probab=100.00 E-value=1e-64 Score=371.38 Aligned_cols=387 Identities=10% Similarity=0.025 Sum_probs=264.0 Q ss_pred chhhHhhccccccccc--ccccc-----------------cc----cccchhhhh--hhhc---CCCCccc-------ch Q lcl|Aclame:pro 3 LPILNFINQTNDPPEV--GSVQS-----------------YF----PDGNDAQIM--ESLL---GDNNEWV-------SA 47 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~--~~~~~-----------------~~----~~~~~~~~~--~~~~---~~~~~~v-------~~ 47 (392) ||||..+++....... ..... .. +........ ..+. +...... .. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~ 80 (547) T protein:vir:63 1 MGLFESIRLAGVNKSDAVKHIEVDDNYSIAIQQREQEQISKAMNNKEVAYSQPVIGSMSANPGFKTKPSIRNNQDLHGVL 80 (547) T ss_pred CchhhhhhhhcCCccccccccccccccchhhhhhhHHHHHHhhcccchhhhchhhheeecccccccCCccCChhHHHHHH Confidence 9999888764321000 00000 00 000000000 0000 0000011 11 Q ss_pred hhhhcchHHHHHHHHHHHhhhhC-------------ceeeecccc-------------ccccccCCcc-----CCHHHHH Q lcl|Aclame:pro 48 RAALRNSDLFSIILQLSSDLAIV-------------KINAEKKKN-------------QGIIDNPSTN-----ANKHGFW 96 (392) Q Consensus 48 ~~a~~~~~v~~~i~~ia~~ia~~-------------p~~~~~~~~-------------~~~~~~PN~~-----~s~~~f~ 96 (392) +.+..+|.|++||+.||+.||++ ++++.+++. ..++.+||++ +|+++|+ T Consensus 81 ~~~~~npiv~~~I~~~a~~ia~~~~~~~~~~~~~~~~ir~k~~~~~~~~~~~~~~~~l~~~l~~pn~~~~p~~~s~~~f~ 160 (547) T protein:vir:63 81 KKFGGNIILNAIINTRSNQVSMYCKPARHSEKGVGFEVRLKDLDKKPTSHDEATIKRIESFIEKTGVDNDINRDSFSSFV 160 (547) T ss_pred HHhhcCHHHHHHHHHHHHHHhhhhhhhhhhccCCCceeEecccccccChhhHHHHHHHHHHHHhhCCCCCCccchHHHHH Confidence 23456799999999999999974 233332111 1235677776 4889999 Q ss_pred HHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceE---EEEEEecCcceeeeEEEeceeEEEecCCCc Q lcl|Aclame:pro 97 QSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGM---YYNITFDDPKIEPILQAPQSDLIHMKLLSI 173 (392) Q Consensus 97 ~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~vih~~~~~~ 173 (392) +.++.+++++||+|++++|+.+|+|++||||+|++|++..+.++... .+++++.+ ++....+++++|||+++++. T Consensus 161 ~~lv~d~ll~Gn~~~~i~rd~~G~~~~L~~l~p~~V~~~~~~~g~~~~~~~~y~~~~~--~~~~~~~~~~eiih~r~n~~ 238 (547) T protein:vir:63 161 KKIVRDTYMYDQVNFEKVFNRNQSMVRFVAKDPTTIFFATTADGKIPDNGNRFVQVID--QKIVATFNAREMAFAVRNPR 238 (547) T ss_pred HHHHHHHHhhCCEEEEEEECCCCcEEEEEEecCceeEEEECCccccccCceEEEEEcC--CcEEEEeccccEEEecccCC Confidence 99999999999999999999999999999999999999888776432 12223222 34456899999999997654 Q ss_pred cc---ccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC--CchH--HHHHHHHHHHhccccCCceeec Q lcl|Aclame:pro 174 DG---GKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG--LLSD--KDKASRSRSFMKRSRSGGPVVL 246 (392) Q Consensus 174 ~~---~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~--~~~~--~~~~~~~~~~~~~~~~g~~~vl 246 (392) .+ ..+|+||+..++.+|..+.+++++..++|+||++|+|+|+++... ++++ +.++.|.+.+.|..|+|+++++ T Consensus 239 ~~~~~~~~G~Spi~~~~~~i~~~~~a~~~~~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lk~~~~~~~~G~~nagk~~vl 318 (547) T protein:vir:63 239 SDIYATGYGYPELEIALKQFIAHENTEAFNDRFFSHGGTTRGILQIKAAQQQSQHALEIFKREWKNSLSGINGSWQIPVV 318 (547) T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhcCcccccccccc Confidence 43 457999999999999999999999999999999999999987643 3322 3456677788899999998666 Q ss_pred -cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc-----------cch-HHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 247 -DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ-----------QSS-IQQISGMYASALNRYLRP 313 (392) Q Consensus 247 -~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~-----------~~~-~~~~~~~~~~~l~p~l~~ 313 (392) ++|++|++++++++|+||+|++++++++||++|||||++||..+++ .++ +++...|++.||.|+++. T Consensus 319 ~~~g~~~~~l~~~~~d~qfle~~~~~~~~Ia~afgVPP~~lG~~~~~~~~~~~~~s~t~sn~e~~~~~~~~~tL~P~~~~ 398 (547) T protein:vir:63 319 SAEDVKFVNMTPSARDMEFEKWLNYLINVISALYGIDPAEINIPNNGGATGSKGGSLNEGNSAEKNQASKNKGLQPLLGF 398 (547) T ss_pred cCCCceEEEcCCChhHHHHHHHHHHHHHHHHHHhCCCHHHcCcccccccccccccccchhhHHHHHHHHHHHHHHHHHHH Confidence 6899999999999999999999999999999999999999965432 223 356778999999999999 Q ss_pred HHHHHHHHhhhhhc----ccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCC-Cccccccc-cCCCC------ Q lcl|Aclame:pro 314 AISELEYKLSDHIS----VNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGY-IPKDLPAP-ENTNK------ 381 (392) Q Consensus 314 i~~~l~~~l~~~~~----~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~-~~~e~~~~-e~~~~------ 381 (392) |+++|+.+|++.++ |++......+..+.+ .+..++.+|++|+||+|++++..+. +..|.... -++.+ T Consensus 399 ie~~ln~~L~~~~~~~~~~~f~~~~~~~~~~~~-~~~~~~~~g~lT~NE~R~~~gl~P~~egGD~~~~~~~~~~~~~~~~ 477 (547) T protein:vir:63 399 IEDFINKHIVAEFGDKYTFQFVGGDIKSELESV-KILAEKAKVAMTVNEVRKELNLPGDVIGGDIPLNGVIVQRIGQLMQ 477 (547) T ss_pred HHHHHHhhcccccCCceEEEeeccccccHHHHH-HHHHHHhCCCcCHHHHHHHhCCCCCCCCCceeeccccccccccccc Confidence 99999999976443 333322223333333 3456778899999999999855442 22222110 00000 Q ss_pred ------------------CCCCCCCCCCC Q lcl|Aclame:pro 382 ------------------KTTGQSNEPVP 392 (392) Q Consensus 382 ------------------~~~gd~~~p~p 392 (392) ..+++++.+.| T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (547) T protein:vir:63 478 QEQFEHEKQQSNLQMLQEQTGNRVSTDVE 506 (547) T ss_pred ccCCccccchhhccccccccCCCCCCCCC Confidence 01111111111 No 70 >protein:vir:101289 Length: 395 # NCBI annotation: phage portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1591 # MgeName: phiNM3 # Cross-refs: genbank:acc:YP_908829;genbank:gi:118725093;genbank:GeneID:4555860 Probab=100.00 E-value=8.8e-65 Score=371.76 Aligned_cols=355 Identities=15% Similarity=0.115 Sum_probs=261.8 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||+++++++..... . .....+..++.++++++++|++||++||+++|++|++++++.. T Consensus 1 Mg~f~~lf~~~~~~~~------~-----------~~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~~~~~ 63 (395) T protein:vir:10 1 MSILEKIFKTRKDITY------M-----------LDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNRIQK 63 (395) T ss_pred CchhhhhhccCccccc------c-----------ccchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCCcccc Confidence 9999988765432210 0 0112345678889999999999999999999999999997653 Q ss_pred ----ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCccee Q lcl|Aclame:pro 80 ----QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIE 155 (392) Q Consensus 80 ----~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 155 (392) ..++.+||++||+++||+.++.+|++.|++|+++.++. .++++++..+++....+. .+..+.... .+ T Consensus 64 ~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~ 134 (395) T protein:vir:10 64 NDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSK-----ELLIADSFYREEYALYDD--IFKDVTVKD--YT 134 (395) T ss_pred chHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCC-----CeEecCCccceeEeecCc--ceeEEEEcC--ce Confidence 23567999999999999999999999999998765443 245565555554433222 122223322 23 Q ss_pred eeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHH--HHHHHHHH Q lcl|Aclame:pro 156 PILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDK--DKASRSRS 233 (392) Q Consensus 156 ~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~--~~~~~~~~ 233 (392) ...++++++|||++++++.+..+|.||+..+...+..+. +.|.+|+.++|++++++....++. ..++..+. T Consensus 135 ~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~~~~~~~~ 207 (395) T protein:vir:10 135 YQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNK 207 (395) T ss_pred eeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHH Confidence 456899999999999888888899999999988876544 456788899999999876443332 22333333 Q ss_pred HhccccCC--ceeeccCCceEeecccChhhH-----HHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHH Q lcl|Aclame:pro 234 FMKRSRSG--GPVVLDDLEEFTALEIKSNVA-----QLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASA 306 (392) Q Consensus 234 ~~~~~~~g--~~~vl~~g~~~~~l~~~~~d~-----~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~ 306 (392) +.+..+++ .++++++|++|++++.++.++ ||+|++++++++||++|||||++||+ +.++.+++.++|++++ T Consensus 208 ~~~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~~--~~sn~e~~~~~~~~~~ 285 (395) T protein:vir:10 208 LFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIYG--ETADLEKNTLVFEKFC 285 (395) T ss_pred HhccccccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhcC--cccCHHHHHHHHHHHH Confidence 44443433 356689999999999988765 89999999999999999999999975 3445577899999999 Q ss_pred HHHHHHHHHHHHHHHhhh------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc--ccc-ccc Q lcl|Aclame:pro 307 LNRYLRPAISELEYKLSD------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK--DLP-APE 377 (392) Q Consensus 307 l~p~l~~i~~~l~~~l~~------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~--e~~-~~e 377 (392) |.|++..|+++|+++|++ .++||...+++.|.+++++.+..++++|++|+||+|++++..+++.. |.+ ..- T Consensus 286 l~P~~~~ie~~l~~kL~~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g~~d~~~~~~ 365 (395) T protein:vir:10 286 LTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLITK 365 (395) T ss_pred HHHHHHHHHHHHHHhhcChhhhcccceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeecc Confidence 999999999999999864 35788888999999999999999999999999999999854444322 211 122 Q ss_pred CCCCCCCCCCCCCCC Q lcl|Aclame:pro 378 NTNKKTTGQSNEPVP 392 (392) Q Consensus 378 ~~~~~~~gd~~~p~p 392 (392) ++.++..+..++..+ T Consensus 366 n~~~~~~~~~~~~~~ 380 (395) T protein:vir:10 366 NYEKANSGENDEKEK 380 (395) T ss_pred ccccccccccccCcc Confidence 333333333322222 No 71 >protein:vir:9507 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:170 # MgeName: phiN315 # Cross-refs: genbank:acc:NP_835554;genbank:gi:30043953;genbank:GeneID:1260535 Probab=100.00 E-value=8.8e-65 Score=371.76 Aligned_cols=355 Identities=15% Similarity=0.115 Sum_probs=261.8 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||+++++++..... . .....+..++.++++++++|++||++||+++|++|++++++.. T Consensus 1 Mg~f~~lf~~~~~~~~------~-----------~~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~~~~~ 63 (395) T protein:vir:95 1 MSILEKIFKTRKDITY------M-----------LDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNRIQK 63 (395) T ss_pred CchhhhhhccCccccc------c-----------ccchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCCcccc Confidence 9999988765432210 0 0112345678889999999999999999999999999997653 Q ss_pred ----ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCccee Q lcl|Aclame:pro 80 ----QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIE 155 (392) Q Consensus 80 ----~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 155 (392) ..++.+||++||+++||+.++.+|++.|++|+++.++. .++++++..+++....+. .+..+.... .+ T Consensus 64 ~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~ 134 (395) T protein:vir:95 64 NDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSK-----ELLIADSFYREEYALYDD--IFKDVTVKD--YT 134 (395) T ss_pred chHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCC-----CeEecCCccceeEeecCc--ceeEEEEcC--ce Confidence 23567999999999999999999999999998765443 245565555554433222 122223322 23 Q ss_pred eeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHH--HHHHHHHH Q lcl|Aclame:pro 156 PILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDK--DKASRSRS 233 (392) Q Consensus 156 ~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~--~~~~~~~~ 233 (392) ...++++++|||++++++.+..+|.||+..+...+..+. +.|.+|+.++|++++++....++. ..++..+. T Consensus 135 ~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~~~~~~~~ 207 (395) T protein:vir:95 135 YQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNK 207 (395) T ss_pred eeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHH Confidence 456899999999999888888899999999988876544 456788899999999876443332 22333333 Q ss_pred HhccccCC--ceeeccCCceEeecccChhhH-----HHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHH Q lcl|Aclame:pro 234 FMKRSRSG--GPVVLDDLEEFTALEIKSNVA-----QLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASA 306 (392) Q Consensus 234 ~~~~~~~g--~~~vl~~g~~~~~l~~~~~d~-----~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~ 306 (392) +.+..+++ .++++++|++|++++.++.++ ||+|++++++++||++|||||++||+ +.++.+++.++|++++ T Consensus 208 ~~~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~~--~~sn~e~~~~~~~~~~ 285 (395) T protein:vir:95 208 LFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIYG--ETADLEKNTLVFEKFC 285 (395) T ss_pred HhccccccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhcC--cccCHHHHHHHHHHHH Confidence 44443433 356689999999999988765 89999999999999999999999975 3445577899999999 Q ss_pred HHHHHHHHHHHHHHHhhh------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc--ccc-ccc Q lcl|Aclame:pro 307 LNRYLRPAISELEYKLSD------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK--DLP-APE 377 (392) Q Consensus 307 l~p~l~~i~~~l~~~l~~------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~--e~~-~~e 377 (392) |.|++..|+++|+++|++ .++||...+++.|.+++++.+..++++|++|+||+|++++..+++.. |.+ ..- T Consensus 286 l~P~~~~ie~~l~~kL~~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g~~d~~~~~~ 365 (395) T protein:vir:95 286 LTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLITK 365 (395) T ss_pred HHHHHHHHHHHHHHhhcChhhhcccceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeecc Confidence 999999999999999864 35788888999999999999999999999999999999854444322 211 122 Q ss_pred CCCCCCCCCCCCCCC Q lcl|Aclame:pro 378 NTNKKTTGQSNEPVP 392 (392) Q Consensus 378 ~~~~~~~gd~~~p~p 392 (392) ++.++..+..++..+ T Consensus 366 n~~~~~~~~~~~~~~ 380 (395) T protein:vir:95 366 NYEKANSGENDEKEK 380 (395) T ss_pred ccccccccccccCcc Confidence 333333333322222 No 72 >protein:vir:100650 Length: 395 # NCBI annotation: 77ORF008 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1476 # MgeName: 77 # Cross-refs: genbank:acc:NP_958604;genbank:gi:41189523;genbank:GeneID:2743796 Probab=100.00 E-value=8.8e-65 Score=371.76 Aligned_cols=355 Identities=15% Similarity=0.115 Sum_probs=261.8 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||+++++++..... . .....+..++.++++++++|++||++||+++|++|++++++.. T Consensus 1 Mg~f~~lf~~~~~~~~------~-----------~~~~~~~~v~~~~~~~~~~v~~~i~~Ia~~iA~~p~~~~~~~~~~~ 63 (395) T protein:vir:10 1 MSILEKIFKTRKDITY------M-----------LDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNRIQK 63 (395) T ss_pred CchhhhhhccCccccc------c-----------ccchhccccchhhhhhhHHHHHHHHHHHHhhccceeEeccCCcccc Confidence 9999988765432210 0 0112345678889999999999999999999999999997653 Q ss_pred ----ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCccee Q lcl|Aclame:pro 80 ----QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIE 155 (392) Q Consensus 80 ----~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 155 (392) ..++.+||++||+++||+.++.+|++.|++|+++.++. .++++++..+++....+. .+..+.... .+ T Consensus 64 ~~~~~ll~~~PN~~~t~~~f~~~~~~~lll~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~ 134 (395) T protein:vir:10 64 NDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSK-----ELLIADSFYREEYALYDD--IFKDVTVKD--YT 134 (395) T ss_pred chHHHHHHhccCcCCCHHHHHHHHHHHHhhCCceEEEEecCC-----CeEecCCccceeEeecCc--ceeEEEEcC--ce Confidence 23567999999999999999999999999998765443 245565555554433222 122223322 23 Q ss_pred eeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHH--HHHHHHHH Q lcl|Aclame:pro 156 PILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDK--DKASRSRS 233 (392) Q Consensus 156 ~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~--~~~~~~~~ 233 (392) ...++++++|||++++++.+..+|.||+..+...+..+. +.|.+|+.++|++++++....++. ..++..+. T Consensus 135 ~~~~~~~~evih~~~~~~~~~~~G~spi~~~~~~~~~~~-------~~~~~~~~~~gii~~~~~~~~~e~~~~~~~~~~~ 207 (395) T protein:vir:10 135 YQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMI-------GAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNK 207 (395) T ss_pred eeeeeccccEEEEccCCCCcccccchHHHHHHHHHHHHH-------HHHHhcCCCceEEEeCCCCCCHHHHHHHHHHHHH Confidence 456899999999999888888899999999988876544 456788899999999876443332 22333333 Q ss_pred HhccccCC--ceeeccCCceEeecccChhhH-----HHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHH Q lcl|Aclame:pro 234 FMKRSRSG--GPVVLDDLEEFTALEIKSNVA-----QLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASA 306 (392) Q Consensus 234 ~~~~~~~g--~~~vl~~g~~~~~l~~~~~d~-----~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~ 306 (392) +.+..+++ .++++++|++|++++.++.++ ||+|++++++++||++|||||++||+ +.++.+++.++|++++ T Consensus 208 ~~~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~f~VPp~~l~~--~~sn~e~~~~~~~~~~ 285 (395) T protein:vir:10 208 LFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNMPFSELSELMRDAIKNVALMIGIPPGLIYG--ETADLEKNTLVFEKFC 285 (395) T ss_pred HhccccccCcceEEcCCCceeeeccccccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhcC--cccCHHHHHHHHHHHH Confidence 44443433 356689999999999988765 89999999999999999999999975 3445577899999999 Q ss_pred HHHHHHHHHHHHHHHhhh------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc--ccc-ccc Q lcl|Aclame:pro 307 LNRYLRPAISELEYKLSD------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK--DLP-APE 377 (392) Q Consensus 307 l~p~l~~i~~~l~~~l~~------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~--e~~-~~e 377 (392) |.|++..|+++|+++|++ .++||...+++.|.+++++.+..++++|++|+||+|++++..+++.. |.+ ..- T Consensus 286 l~P~~~~ie~~l~~kL~~~~~~~~~~~f~~~~l~~~D~~~~~~~~~~~~~~G~lt~NE~R~~~g~~p~~~g~~d~~~~~~ 365 (395) T protein:vir:10 286 LTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLITK 365 (395) T ss_pred HHHHHHHHHHHHHHhhcChhhhcccceecchhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeecc Confidence 999999999999999864 35788888999999999999999999999999999999854444322 211 122 Q ss_pred CCCCCCCCCCCCCCC Q lcl|Aclame:pro 378 NTNKKTTGQSNEPVP 392 (392) Q Consensus 378 ~~~~~~~gd~~~p~p 392 (392) ++.++..+..++..+ T Consensus 366 n~~~~~~~~~~~~~~ 380 (395) T protein:vir:10 366 NYEKANSGENDEKEK 380 (395) T ss_pred ccccccccccccCcc Confidence 333333333322222 No 73 >protein:vir:78310 Length: 376 # NCBI annotation: gp3 # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1850 # MgeName: B025 # Cross-refs: genbank:acc:YP_001468642;genbank:gi:157325220;genbank:GeneID:5601655 Probab=100.00 E-value=7.5e-65 Score=372.14 Aligned_cols=353 Identities=11% Similarity=0.049 Sum_probs=256.3 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||++++++....... .+ +. .+..++.+.++++++|++||++||+++|++|++++++.. T Consensus 1 Mg~f~~l~~~~~~~~~~---------~~---~~-----~~~~~~~~~~l~~~~v~~~i~~Ia~~ia~~p~~~~~~~~~~~ 63 (376) T protein:vir:78 1 MGFFSELFKRNKEIEWM---------WD---LD-----FLEDKTTKVYLKKMALNTCVKHIARTIAKSDFRLKNGETSVR 63 (376) T ss_pred CchhhhhhccCCccccc---------cc---hh-----hccccchhhhhhhHHHHHHHHHHHHhhcccceeecccccccc Confidence 99999887654322110 00 11 123477889999999999999999999999999997652 Q ss_pred ----ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCccee Q lcl|Aclame:pro 80 ----QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIE 155 (392) Q Consensus 80 ----~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 155 (392) ..++.+||++||+++||+.++.+|+++||+|+++.|+..|.+.+++|+.+..+.... ++.+...+ .+ T Consensus 64 ~~l~~ll~~~PN~~~t~~~f~~~~~~~lll~Gn~~~~~~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~--~~ 134 (376) T protein:vir:78 64 DKLYYKLNIRPNTDMSSSSFWEKVIYKLIYDNECLIVLSDTDDFLIADSYVRKEFAFFPDV-------FEGVTVKD--YR 134 (376) T ss_pred chHHHHHhhccccCCCHHHHHHHHHHHHhHcCcEEEEEEeCCCeeeccceeecccceeeee-------eeeeeeec--ce Confidence 235679999999999999999999999999999999999999999999987664322 22222222 22 Q ss_pred eeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHH-HHHcCCCcceEEEeCCCCCchH--HHHHHHHH Q lcl|Aclame:pro 156 PILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTIS-SLNSSLNVPGVLTVKGGGLLSD--KDKASRSR 232 (392) Q Consensus 156 ~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~-~~~ng~~~~~il~~~~~~~~~~--~~~~~~~~ 232 (392) ....+++++|||+++....+..++.++...+...+. ..... ++.++.++.++++.++..++++ +.++.+.+ T Consensus 135 ~~~~~~~~evih~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 208 (376) T protein:vir:78 135 YNRNFSMDDVIFLEYGNERLSAFTDGMFEDYGELFG------KMIRAQMRNFQIRGAVNFKMAGVADKDKQTKLQEYIDK 208 (376) T ss_pred eeeeeccccEEEeccCCCCchhhhhHHHHHHHHHHH------HHHHHHHhcCCCceeEEEccCCCCCHHHHHHHHHHHHH Confidence 345789999999998765544433333333332222 22222 3344445555555555444443 33455666 Q ss_pred HHhccc-cCCceeeccCCceEeecccChhh-----HHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHH Q lcl|Aclame:pro 233 SFMKRS-RSGGPVVLDDLEEFTALEIKSNV-----AQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASA 306 (392) Q Consensus 233 ~~~~~~-~~g~~~vl~~g~~~~~l~~~~~d-----~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~ 306 (392) .+.+.. +.++++++++|++|++++.++.| +||+|++++++++||++|||||++||+ +.++.+++..+|+++| T Consensus 209 ~~~g~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVPp~~l~~--~~s~~e~~~~~f~~~~ 286 (376) T protein:vir:78 209 VYASFNNNEIAIVPQLEGFNYEEFGTTSVNNSQSFDEVKKLRKEMIDYVASILGIPSSLLHG--DMADLSNNMKAYMEYC 286 (376) T ss_pred HhccccccCcceEEcCCCceEEeeccCccccchhHHHHHHHHHHHHHHHHHHhCCCHHHhCC--CCCCHHHHHHHHHHHH Confidence 676654 45568889999999999998866 499999999999999999999999975 3344456789999999 Q ss_pred HHHHHHHHHHHHHHHhhh----hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc--ccc-cccCC Q lcl|Aclame:pro 307 LNRYLRPAISELEYKLSD----HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK--DLP-APENT 379 (392) Q Consensus 307 l~p~l~~i~~~l~~~l~~----~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~--e~~-~~e~~ 379 (392) |.|++++|+++|+++|++ .++++++.+++.|.+++++.+..++++|++|+||+|++++..+++.. |.. ..-++ T Consensus 287 l~P~~~~ie~~l~~kll~~~~~~~~~~~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~lg~~p~~~g~~d~~~~~~n~ 366 (376) T protein:vir:78 287 IDPLTKKLEDELNAKLFTFSEFLAGEHIKIIHKKDIIENAEAVDKLVASGSFNRNEVRELLGAERVDNPELDKYLITKNY 366 (376) T ss_pred HHHHHHHHHHHHHhhhCCcccceecccchhhcccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCceeeeccCc Confidence 999999999999999964 35778888899999999999999999999999999999855554422 211 12344 Q ss_pred CCCCCCCCCC Q lcl|Aclame:pro 380 NKKTTGQSNE 389 (392) Q Consensus 380 ~~~~~gd~~~ 389 (392) .|+..|++|- T Consensus 367 ~~~~~~~e~g 376 (376) T protein:vir:78 367 QSADEGGEDG 376 (376) T ss_pred eehhccccCC Confidence 4544333333 No 74 >protein:vir:100691 Length: 535 # NCBI annotation: hypothetical protein # Family: family:all:2446 # MgeID: mge:1633 # MgeName: LP65 # Cross-refs: genbank:acc:YP_164747;genbank:gi:56693160;genbank:GeneID:3197324 Probab=100.00 E-value=1.7e-63 Score=364.72 Aligned_cols=385 Identities=11% Similarity=0.053 Sum_probs=264.7 Q ss_pred chhhHhhcc--------cccccccccc----------------ccccc-----cc-----------chhhhhhhhcCC-C Q lcl|Aclame:pro 3 LPILNFINQ--------TNDPPEVGSV----------------QSYFP-----DG-----------NDAQIMESLLGD-N 41 (392) Q Consensus 3 Mg~~~~~~~--------~~~~~~~~~~----------------~~~~~-----~~-----------~~~~~~~~~~~~-~ 41 (392) |.|+.-++. .+..+..+.+ +.... ++ .....+..+... . T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~ 80 (535) T protein:vir:10 1 MAILKDLRNAFSLSNKKSTSYIELGDYDKDIVNKAIRPGRASARDTVDGIDIADGNVAGQYSVASISDVLSTKKLLKAYA 80 (535) T ss_pred ChhhHHHHHHHHhhhhhhhhhHHHhhhhHHHHHhhhhhhhhhhhccccccccccCCcccccccCccccccCHHHHHHHhc Confidence 444432111 1100000000 00000 00 000011111110 0 Q ss_pred C---cccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--------------ccccccCCccCCHHHH----HHHHH Q lcl|Aclame:pro 42 N---EWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--------------QGIIDNPSTNANKHGF----WQSMF 100 (392) Q Consensus 42 ~---~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--------------~~~~~~PN~~~s~~~f----~~~~~ 100 (392) + +...-+++....++|+|+.++++.++++|+++++.+. ..++.+||++|++++| ++.++ T Consensus 81 ~~~~~~~~i~t~~~~va~~~~i~~~s~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~lL~~~PN~~~~~~~~~~~~~~~lv 160 (535) T protein:vir:10 81 DNDIVQAIIRTRTNQVLTYSNPSRYNRNGVGFKVELKDATKVMSKAQIKRAHEIEDFIYNTGSEYYEWRDTFPRLLTKII 160 (535) T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHhcccCcceeEEEeccCCCcchhhhhhhHHHHHHHhCCCCCCChhHHHHHHHHHHH Confidence 1 1112245557788999999999999999999986532 2356799999998764 55566 Q ss_pred HHHHH-hCCeeEEEeeccCCceEEEEEeccccceeeecCccc---eEEEEEEecCcceeeeEEEeceeEEEecCCCccc- Q lcl|Aclame:pro 101 AQLLL-GGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN---GMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDG- 175 (392) Q Consensus 101 ~~l~l-~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~- 175 (392) .++++ .|++|++|+|+..|+|++||||+|+.|++..+.++. ..++.+ .+ ++....+++++|||+++++..+ T Consensus 161 ~d~l~~~g~ay~~i~r~~~G~~~~L~~l~p~~V~v~~d~~~~~~~~~~~~~--~~--~~~~~~~~~~eiih~~~~~~~~~ 236 (535) T protein:vir:10 161 NDMYVQDQINIERIFKNDSNELDHFNAVDASKVVISYSPRSKDQPRKFEQF--VS--ETKSVKFSERNLTFINYWNLSDT 236 (535) T ss_pred HHHHhhCCceEEEEEECCCCcEEEEEEeCCceeEEEEcCccccCceEEEEE--ec--CceeEEECcccEEEEeccCCCCc Confidence 66555 468999999999999999999999999998876553 233222 22 2345679999999999865443 Q ss_pred --ccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC----Cch--HHHHHHHHHHHhccccCCceeecc Q lcl|Aclame:pro 176 --GKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG----LLS--DKDKASRSRSFMKRSRSGGPVVLD 247 (392) Q Consensus 176 --~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~----~~~--~~~~~~~~~~~~~~~~~g~~~vl~ 247 (392) ..+|+||+..++.+|..+.+++++..++|+||++|+|||++++.. +++ ++.++.|.+.+.|..|+|+++||. T Consensus 237 ~~~~~G~Spi~~~~~~i~~~~aa~~~~~~~f~ng~~p~giL~~~~~~~~~ls~e~~e~lk~~~~~~~~G~~nag~~~vl~ 316 (535) T protein:vir:10 237 DRRGYGYSPVEASIPLIRAIYDTEQFNARFFSQGGTTRGILVIDQDGDAQANQMMLAGIRRQWTSQGSGLGGAWKIPILA 316 (535) T ss_pred ccccccccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEEEEecCCCCcccCHHHHHHHHHHHHHHhcCccccccccccc Confidence 457999999999999999999999999999999999999998642 222 234566778888999999987765 Q ss_pred -CCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-------------ch-HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 248 -DLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-------------SS-IQQISGMYASALNRYLR 312 (392) Q Consensus 248 -~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-------------~~-~~~~~~~~~~~l~p~l~ 312 (392) +|++|++++++++|+||+|++++++++||++|||||++||..++++ ++ +++...|++.||.|+++ T Consensus 317 ~~g~~~~~l~~~~~D~qfle~~~~~~~eIa~afgVPp~~lG~~~~at~sn~~~~~~~~~~s~~E~~~~~~~~~~L~P~l~ 396 (535) T protein:vir:10 317 AKDAKFVNMTQNSRDMEFDKFLNFMIYDTAAIFQMQPEEINFPNNGGSTGKSGTKSVNEGSTAKAKLESSKDKGLTPLLS 396 (535) T ss_pred CCCceEEecCCChhHHHHHHHHHHHHHHHHHHhCCCHHHhccccCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHH Confidence 7999999999999999999999999999999999999999765432 12 23556788999999999 Q ss_pred HHHHHHHHHhhhh----hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccc----cCC-CCCC Q lcl|Aclame:pro 313 PAISELEYKLSDH----ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAP----ENT-NKKT 383 (392) Q Consensus 313 ~i~~~l~~~l~~~----~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~----e~~-~~~~ 383 (392) .|+++|+.+|++. ++|+...+.+.+..++++.+.... +|++|+||+|++++..+++..|.+.. .++ +... T Consensus 397 ~ie~~ln~~Ll~~~~~~~~f~f~~l~~~d~~~r~~~~~~~~-~g~lT~NE~R~~~gl~piegGD~~~~~~~~~~~~~~~~ 475 (535) T protein:vir:10 397 FIEQVINDKIMRYVDTDYRFSFTLGDAQDKLQEEQVWKLKL-ANGYFINEYRKDHGLKTVDGLDVPGFIGSAENFINATG 475 (535) T ss_pred HHHHHHhhhcccccCCeEEEEeccccccCHHHHHHHHHHHH-cCCCCHHHHHHHhCCCCCCCccccccccchhhcccccc Confidence 9999999999764 456666677778777777665544 66799999999986555543443221 010 0000 Q ss_pred CCCCCCCCC Q lcl|Aclame:pro 384 TGQSNEPVP 392 (392) Q Consensus 384 ~gd~~~p~p 392 (392) .++.+.|.| T Consensus 476 ~~~~~~p~~ 484 (535) T protein:vir:10 476 FGQPNVPDS 484 (535) T ss_pred cccccCCCC Confidence 001111111 No 75 >protein:vir:3153 Length: 467 # NCBI annotation: capsid protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:316 # MgeName: PhiCh1 # Cross-refs: genbank:acc:NP_665924;genbank:gi:22091110;genbank:GeneID:951257 Probab=100.00 E-value=4.2e-63 Score=362.57 Aligned_cols=347 Identities=13% Similarity=0.036 Sum_probs=261.9 Q ss_pred chhhhhcchHHHHHHHHHHHhhhhCceeeecccc----------------ccccccCCccC--------CHHHHHHHHHH Q lcl|Aclame:pro 46 SARAALRNSDLFSIILQLSSDLAIVKINAEKKKN----------------QGIIDNPSTNA--------NKHGFWQSMFA 101 (392) Q Consensus 46 ~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~----------------~~~~~~PN~~~--------s~~~f~~~~~~ 101 (392) -.+-+-.+++|++||++||++||++|++++.+.. .....+||+.| |+.+||+.++. T Consensus 1 l~~l~~~n~~v~~ci~~ia~~ia~~p~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~pn~~~~~~~~~~~t~~~~~~~~~~ 80 (467) T protein:vir:31 1 MAELLEHNETHAKCVHAKSRYVAGFGINIIPHPEAEDPDRDGEQYERVWDFWFGDDSNWQVGPMESERATATNVLQTAWT 80 (467) T ss_pred ChhhhhcCHHHHHHHHHHHHhhhcCCeEEEEccCcccccchhhhhhhHHHHhhccCCCccccchhhHhhHHHHHHHHHHH Confidence 1222234799999999999999999999974321 02245677654 67789999999 Q ss_pred HHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCcc-------ceEEE------------------EEEecCcceee Q lcl|Aclame:pro 102 QLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE-------NGMYY------------------NITFDDPKIEP 156 (392) Q Consensus 102 ~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~-------~~~~~------------------~~~~~~~~~~~ 156 (392) +++++||+|++++|+.+|+|++|+||+|+.|++..+... ...++ .........+. T Consensus 81 ~l~l~Gn~~i~~~r~~~G~~~~l~~l~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (467) T protein:vir:31 81 DYEAIGWLTIEILTQTDGTPTGLAYVPGHTIRKRMDERGFVQLLEEKEKYFGVAGDRYQTNGNGDLDPVFVDADDGSTGT 160 (467) T ss_pred HHHhcCCeEEEEEECCCCcEEEEEEeCCceeEeeeecceeEeecCCceeeEEeccccceeecccceeeeeeeeccccccc Confidence 999999999999999999999999999999998765431 11111 11112233456 Q ss_pred eEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC-CCchH--HHHHHHHHH Q lcl|Aclame:pro 157 ILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG-GLLSD--KDKASRSRS 233 (392) Q Consensus 157 ~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~-~~~~~--~~~~~~~~~ 233 (392) .+.+++++|||++.+++.+..+|+||+.++..++..+.++.+++.++|+||++|+|+|++++. .++++ +.++.+... T Consensus 161 ~~~~~~~diih~r~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~~l~~e~~~~~~~~~~~~ 240 (467) T protein:vir:31 161 SVSNPANELIFKRNHSPLYPHYGAPDIIPAVKTIRGDSAAQDYNIDFFENDGVPRIAIIVKGAELTEKGREEMRNLIEDN 240 (467) T ss_pred eeEeccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHHHHHHHHHHHHhh Confidence 678999999999998877888999999999999999999999999999999999999998753 33332 223333333 Q ss_pred Hh-----------ccccCCceeeccCCceEeecc--------cChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc- Q lcl|Aclame:pro 234 FM-----------KRSRSGGPVVLDDLEEFTALE--------IKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ- 293 (392) Q Consensus 234 ~~-----------~~~~~g~~~vl~~g~~~~~l~--------~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~- 293 (392) +. +..++++++++..|+++++++ .+++|+||++++++++++||++|||||++||...+++ T Consensus 241 ~~~~~~~~~~~~~g~~n~~~~~~l~~g~~~~~~~~~~~~ls~~~~~d~qf~e~~~~~~~~Ia~~fgVpp~~lG~~~~~~~ 320 (467) T protein:vir:31 241 NEDNHRTAFIETEKIVQNEDYLNLADGADRSDVEIRLEPLTVGIDEEASFLEFRGRNEHDILKVHDVPPVIAGVVESGAF 320 (467) T ss_pred hcchhhhhhhhhcccccccccccccCCCcccccceeEEeccccChhhHHHHHHHHHHHHHHHHHhCCCHHHcccCCCCCc Confidence 32 556888899998776655543 2578999999999999999999999999999654322 Q ss_pred -ch-HHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHH Q lcl|Aclame:pro 294 -SS-IQQISGMYASALNRYLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVL 363 (392) Q Consensus 294 -~~-~~~~~~~~~~~l~p~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l 363 (392) ++ .++..+|++.||.|+++.|+++|+.+|++ +++||...+++.+.+++++.+..++++|++|+||+|+++ T Consensus 321 ~s~~e~~~~~f~~~~l~P~~~~ie~~ln~~l~~~~~~~~~~~i~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~ 400 (467) T protein:vir:31 321 STDAEEQRKEFAEETIQPKQHDFGELLYELVHKQGLDAPDWTIEFELAKPDTKLQDVEIASQRVQAMQGLLTVNELRDEF 400 (467) T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhccCCceEEEecchhhccCHHHHHHHHHHHHhCCCcCHHHHHHHh Confidence 33 46778999999999999999999999864 368999999999999999999999999999999999998 Q ss_pred HhCCCCcccccc------ccCCCCC---CCCCCCCCCC Q lcl|Aclame:pro 364 QEAGYIPKDLPA------PENTNKK---TTGQSNEPVP 392 (392) Q Consensus 364 ~~~g~~~~e~~~------~e~~~~~---~~gd~~~p~p 392 (392) +..+++..++.. ..+.+.. ..+++.++.+ T Consensus 401 Gl~pi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (467) T protein:vir:31 401 GFEPFPEEHVYGGETLVAEVTGGSGPGGGIGDQIEQLV 438 (467) T ss_pred CCCCCCcccccCCcccccccccccCCCCcccCcCCCCC Confidence 555543222111 0111111 1122222222 No 76 >protein:vir:96579 Length: 576 # NCBI annotation: ORF012 # Family: family:all:2446 # MgeID: mge:1623 # MgeName: Twort # Cross-refs: genbank:acc:YP_238542;genbank:gi:66391267;genbank:GeneID:5130361 Probab=100.00 E-value=9.9e-63 Score=360.52 Aligned_cols=390 Identities=12% Similarity=0.016 Sum_probs=261.4 Q ss_pred CcchhhHhhccc---ccccccccccccccccchhhhhhhhcCCCCc---c--------c--chhhhhcchHHHHHHHHHH Q lcl|Aclame:pro 1 MILPILNFINQT---NDPPEVGSVQSYFPDGNDAQIMESLLGDNNE---W--------V--SARAALRNSDLFSIILQLS 64 (392) Q Consensus 1 m~Mg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--------v--~~~~a~~~~~v~~~i~~ia 64 (392) |.-++-.+|+.. .+....+...... +...++...+.+..+. + + .-.....+|.|++||++|| T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--a~~~p~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~npiv~~~I~~ia 104 (576) T protein:vir:96 27 IDDGLQANIRNIEEKSKELNKSLYGKQQ--AYAEPFLEVMDTNPEFRTKRSYMKNSDNLHDVLKQFGNNPILNAIILTRS 104 (576) T ss_pred cccChhHHHHHhhhhhhhhccccCCccc--hhhcceeeeeecCCCccccCcchhhhhhhHHHHHHhhcCHHHHHHHHHHH Confidence 333332232222 1111111111111 0111111111111110 0 0 0122335788999999999 Q ss_pred HhhhhC-------------ceeeeccccc-----------------cccccCCcc-CCHHHHHHHHHHHHHHhCCeeEEE Q lcl|Aclame:pro 65 SDLAIV-------------KINAEKKKNQ-----------------GIIDNPSTN-ANKHGFWQSMFAQLLLGGEAFAYR 113 (392) Q Consensus 65 ~~ia~~-------------p~~~~~~~~~-----------------~~~~~PN~~-~s~~~f~~~~~~~l~l~Gn~~~~i 113 (392) ++||++ ++++++.+.. ..+..|||. +|+++|++.++.+++++||+|+++ T Consensus 105 ~~vA~~~~~~~~~~~~~~~~i~lk~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~dlll~Gna~~~i 184 (576) T protein:vir:96 105 NQVAMYCQPSRYNERGLGFEVRMRDLDAEPGKKEKEEIKRIENFILNTGRDKDIDRDSFQSFCRKIVRDTYTYDQVNFEK 184 (576) T ss_pred HHHHhhhhhhhhccccccceeEEecCcCccchhhhHhhhhHHhhHhhccCCCCCccccHHHHHHHHHHHHHhcCCeEEEE Confidence 999973 3444433211 012245554 699999999999999999999998 Q ss_pred eec--cCCceEEEEEeccccceeeecCccceEEEEEE-ecCcceeeeEEEeceeEEEecCCC-cc--cccccCCHHHHHH Q lcl|Aclame:pro 114 WRN--ANGADMKWEYLRPSQVNTYYFEYENGMYYNIT-FDDPKIEPILQAPQSDLIHMKLLS-ID--GGKTGISPLYSLR 187 (392) Q Consensus 114 ~r~--~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~vih~~~~~-~~--~~~~G~s~~~~~~ 187 (392) +++ ..|++++||||+|++|++..+.++..+++... +....++....+++++|||++.++ .+ ...+|+||+.+++ T Consensus 185 ~~~rd~~g~~~~L~pl~p~~V~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~d~~~~~~G~Spi~~a~ 264 (576) T protein:vir:96 185 VFNKKNATTMDKFIAVDPSTIFYATDKNGKIIKGGKRFVQVINKKVVASFTSREMAMGIRNPRTELSSSGYGLSEVEIAM 264 (576) T ss_pred EEecCCCCceEEEEEeCCceeEEEECCCCceeeeeeEEEEecCCceEEEecccceEEEeecCCCCcccCcccccHHHHHH Confidence 854 46889999999999999999988766543221 222234556788999988765443 32 2467999999999 Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC--Cch--HHHHHHHHHHHhccccCCc-eeeccCCceEeecccChhhH Q lcl|Aclame:pro 188 RESKIQRASDRLTISSLNSSLNVPGVLTVKGGG--LLS--DKDKASRSRSFMKRSRSGG-PVVLDDLEEFTALEIKSNVA 262 (392) Q Consensus 188 ~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~--~~~--~~~~~~~~~~~~~~~~~g~-~~vl~~g~~~~~l~~~~~d~ 262 (392) .+|..+.++++++.++|+||++|+|||+++++. +++ ++.++.|.+.+.|..|+|+ ++||++|++|++++++++|+ T Consensus 265 ~~i~~~~~~~~~~~~~f~Ng~~p~giL~~~~~~~ls~e~~~~lr~~~~~~~~G~~nag~~p~vl~~G~~~~~ls~~~~d~ 344 (576) T protein:vir:96 265 KQFIAYNNTETFNDRFFSHGGTTRGILQIKSEQQQSQRALENFKREWKSSFSGINGSWQVPVVMADDIKFVNMTPTANDM 344 (576) T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceeecCCCceEEeccCChhhH Confidence 999999999999999999999999999997643 332 2446677788889999999 58999999999999999999 Q ss_pred HHHHHHHHHHHHHHHHhcccHHHcCCcccc-------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccc Q lcl|Aclame:pro 263 QLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ-------------QSSIQQISGMYASALNRYLRPAISELEYKLSDHISVN 329 (392) Q Consensus 263 ~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~-------------~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~~~~d 329 (392) ||+|++++++++||++|||||++||..+.+ .+.+++.++|++.||.|+++.|+++|+.+|++.++.+ T Consensus 345 qfle~~~~~~~~Ia~afgVPp~~lG~~~~~~~~g~~~~~s~t~sn~e~~~~~f~~~tL~P~~~~ie~~ln~~Ll~~~~~~ 424 (576) T protein:vir:96 345 QFEKWLTYLINIISALYGIDPAEIGFPNRGGATGGKGGNTLNEADPGKKQQQSQNKGLQPLLRFIEDLINTHIISEYSDK 424 (576) T ss_pred HHHHHHHHhHHHHHHHhCCCHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhccCc Confidence 999999999999999999999999975432 2334678899999999999999999999998765433 Q ss_pred chh-hhhcchHHHHHHHH--HHHhCCCcCHHHHHHHHHhCCCCccccccc-cCCCC------------------------ Q lcl|Aclame:pro 330 MRP-AIDPLGDNYLSTIS--TATRWGALAENQATFVLQEAGYIPKDLPAP-ENTNK------------------------ 381 (392) Q Consensus 330 ~~~-~~~~~~~~~~~~~~--~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~-e~~~~------------------------ 381 (392) ... +.+.+.+.+++.+. .++.+|++|+||+|++++..+++..|.+.. -++.+ T Consensus 425 ~~~~f~r~d~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~piegGD~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 504 (576) T protein:vir:96 425 YVFQFVGGDTKSELDKIKILQEEVKTYKTVNEARKEKGLKPIEGGDVLLDGSFIQSMSLNTQKEQYEDTKQKERFDMIQQ 504 (576) T ss_pred eEEEeccCCHHHHHHHHHHHHHHhcCccCHHHHHHHhCCCCCCCcceeccccccccccccccCCCCCCcccccccccccc Confidence 222 23456666665554 345679999999999985555443332110 00100 Q ss_pred -CCCCCCCCCCC Q lcl|Aclame:pro 382 -KTTGQSNEPVP 392 (392) Q Consensus 382 -~~~gd~~~p~p 392 (392) ..+++...|.| T Consensus 505 ~~~~~~~~~~~~ 516 (576) T protein:vir:96 505 FLNSPDDEEPQQ 516 (576) T ss_pred ccCCCCCCCCCC Confidence 01111111111 No 77 >protein:vir:4089 Length: 395 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:86 # MgeName: 2389 # Cross-refs: genbank:acc:NP_510984;swissprot:trembl:q8w606;genbank:gi:17488506;uniprot:Q8W606;genbank:GeneID:1260314 Probab=100.00 E-value=1.6e-63 Score=364.88 Aligned_cols=362 Identities=12% Similarity=0.050 Sum_probs=251.6 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) |||+++++....+...+... .+...| ..+..++.++++++++|++||++||+++|++|++++++.. T Consensus 1 Mg~~~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~~~~l~~~~v~~~v~~Ia~~ia~~p~~~~~~~~~~~ 69 (395) T protein:vir:40 1 MGFKSWVSGFFNEEQRTLNL------TDTVWC-----SIPSEKLKELSIKKWAIDSCANKIANTLSCAEVLTYEKGEEVR 69 (395) T ss_pred CchHHHHHhhhccccccccc------ccchhh-----ccccccchhhhhhhHHHHHHHHHHHHHHhhCceeeccCCcccc Confidence 99999998877655433211 111112 2234577889999999999999999999999999997642 Q ss_pred ----ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCccee Q lcl|Aclame:pro 80 ----QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIE 155 (392) Q Consensus 80 ----~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 155 (392) ..++.+||++||+++||+.++.+|+++||||+++.++.. ++.+...+ .........+......+ .+ T Consensus 70 ~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnay~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~v~~~~--~~ 139 (395) T protein:vir:40 70 KKNWYMFNVEANQNQNATEFWKKAIYKLVYDNEALIFMQDEYI------YVADSFTK--NDKSLYENTYTEVTLKD--LT 139 (395) T ss_pred chHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCceEEEEecCce------eecCCccc--cccccccceeeeeeecC--ce Confidence 245679999999999999999999999999999876542 22222211 11111111222222222 22 Q ss_pred eeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch--HHHHHHHHHH Q lcl|Aclame:pro 156 PILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS--DKDKASRSRS 233 (392) Q Consensus 156 ~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~--~~~~~~~~~~ 233 (392) ....+++++|||+++.+..+..++.+.+..+...+.... ....+.|+.++.++++.+...+++ ++.++.+.+. T Consensus 140 ~~~~~~~~evih~r~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 214 (395) T protein:vir:40 140 LKKEFKESEVLHLTLNNESIKSIIDGFYLLYGDLLTAAV-----NKYKKLNSRKIIVKLKAMFGQTPEAEEKLRLMLSER 214 (395) T ss_pred eeeeeccccEEEeecCCCCccccchhHHHHHHHHHHHHH-----HHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH Confidence 345789999999998766555444444444444333222 222345555566666666555444 2334556666 Q ss_pred Hhcc-ccCCceeeccCCceEeecccChhhHHHHHHHHHHH---HHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHH Q lcl|Aclame:pro 234 FMKR-SRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTS---KQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNR 309 (392) Q Consensus 234 ~~~~-~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~---~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p 309 (392) +.+. .++++++++++|++|++++.+++|+||+|+++++. ++||++|||||++||+ +.++.+++.++|+++||.| T Consensus 215 ~~~~~~~~~~~~vl~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~Ia~~fgVPp~~l~~--~~sn~e~~~~~f~~~~L~P 292 (395) T protein:vir:40 215 MKKFLAEGDSALPVEDGMEIDELAGDSKIAESRDIKKMIDDVFEMVANSFNIPLGLAKG--DTVGLSEQVNSFLMFSINP 292 (395) T ss_pred HHHhhccCCceeecCCCceEEeccCChhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhcC--CCcCHHHHHHHHHHHHHHH Confidence 6554 57788999999999999999999999999998875 7999999999999974 3445567889999999999 Q ss_pred HHHHHHHHHHHHhhh--------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCC-c-ccccc-ccC Q lcl|Aclame:pro 310 YLRPAISELEYKLSD--------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYI-P-KDLPA-PEN 378 (392) Q Consensus 310 ~l~~i~~~l~~~l~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~-~-~e~~~-~e~ 378 (392) ++++|+++|+.+|++ +++||...+++.|.+++++.+.+++++|++|+||+|++++..|++ | .|... .-+ T Consensus 293 ~~~~ie~~l~~kLl~~~~~~~g~~i~fd~~~ll~~d~~~~~~~~~~~~~~G~~t~NE~R~~~g~~pi~~~~gD~~~~~~n 372 (395) T protein:vir:40 293 IAEMFTDEGNRKFYGRDSVLERTYMKLDTTRIKVQDIQEIASSMDVLFHIGVNTIDDNLRMIGREPVMSPETQERFVTKN 372 (395) T ss_pred HHHHHHHHHHHhcCChhhhcCCceEEEechhhhccCHHHHHHHHHHHHhCCCCCHHHHHHHhCCCCCCCCCCceeeeccc Confidence 999999999999864 378999999999999999999999999999999999998544443 1 12111 111 Q ss_pred CCCC-------CCCCCCCCCC Q lcl|Aclame:pro 379 TNKK-------TTGQSNEPVP 392 (392) Q Consensus 379 ~~~~-------~~gd~~~p~p 392 (392) +.++ .||+.++--= T Consensus 373 ~~~~~~~~~~~kgge~~~~~~ 393 (395) T protein:vir:40 373 YAPLGENEEDLKGGDINENKG 393 (395) T ss_pred cccccccccccCCCCCCCCcC Confidence 1111 2222111000 No 78 >protein:vir:9641 Length: 395 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:173 # MgeName: 315.1 # Cross-refs: genbank:acc:NP_795403;genbank:gi:28876176;genbank:GeneID:1257709 Probab=100.00 E-value=6.8e-64 Score=366.89 Aligned_cols=360 Identities=11% Similarity=0.061 Sum_probs=253.9 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ-- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~-- 80 (392) ||||++|+.......... ..+.. -..++.+.++++++|++||++||++||+||+++++++.. T Consensus 1 Mgl~d~~~~~~~~~~~~~-----------~~~~~-----~~~~~~~~~l~~~~v~~~i~~Ia~~ia~lp~~v~~~~~~~~ 64 (395) T protein:vir:96 1 MGILDFFSFKKSGTLSDD-----------DSGST-----TSEKLTNVVLKEDALYKCVNYLARIISKSTFRIKAPEKLTE 64 (395) T ss_pred CcchhhhcCCCCcccccc-----------ccccc-----hhhhcchhhhhhHHHHHHHHHHHHhhccceeEEEeCCcccc Confidence 999999976543221110 01111 123667889999999999999999999999999986432 Q ss_pred -------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcc Q lcl|Aclame:pro 81 -------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPK 153 (392) Q Consensus 81 -------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~ 153 (392) .++.+||++||+++||+.++.+++++||+|+++.|+..+.+...++..... .. ..++.....+ T Consensus 65 ~~~~~~~lL~~~PN~~~t~~~f~~~l~~~lll~Gna~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~v~~~~-- 134 (395) T protein:vir:96 65 NQKDWLYWINTKANPNQSASQFWVEVVQKLLVDGETLIFVIPGKGIYVADAFTQDKKL-------SG-NKFKVSRVQG-- 134 (395) T ss_pred ccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEcCCceecCCcccccccc-------cc-ceeeeeeecc-- Confidence 345799999999999999999999999999999987654333222221110 11 1122222222 Q ss_pred eeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHH------HHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHH Q lcl|Aclame:pro 154 IEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQ------RASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDK 227 (392) Q Consensus 154 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~------~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~ 227 (392) ......+++++|+|+|+.+.++..++.+++......+... ..+.++..+++.+++.++++++.++....+ .. T Consensus 135 ~~~~~~~~~~dvih~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 212 (395) T protein:vir:96 135 QTYEKIFTFDQVIYLKNDNSDLMLKVESLWEEYGELLGHVINNQKIANQIRFTMTPPKDKVRERAQENSDGGRQPK--SD 212 (395) T ss_pred ceeeeEeccCceEEecccCCccccccccccchHHHHHHHHHHHHHHHHHHHHHhhhcccccccceeeccCchhhHH--HH Confidence 2234678999999999887766655666555444433333 234467888999999999999887654432 23 Q ss_pred HHHHHHHhcc--ccCCceeeccCCceEeecccChhhHHHHHHHHHH------HHHHHHHhcccHHHcCCcccccchHHHH Q lcl|Aclame:pro 228 ASRSRSFMKR--SRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWT------SKQYAKVYGLPDSYIGGQGDQQSSIQQI 299 (392) Q Consensus 228 ~~~~~~~~~~--~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~------~~~Ia~~fgVP~~~lg~~~~~~~~~~~~ 299 (392) +++.+.+.+. .+.++++++++|++|++++.++.|+|++|.+++. .++||++|||||++||+ +.++.+++. T Consensus 213 ~~~~~~~~~~~~~~~~~v~~l~~g~~~~~l~~~~~d~q~~e~~~~~~~~~~~~~eIa~~fgVPp~~l~~--~~sn~e~~~ 290 (395) T protein:vir:96 213 KDFFKRTIEKIRTESVVGIPVTANTNYEEYGSKNTGSVKSYVDDIKKLKDQYMAEFAEMLGIPISLLHG--DIADNQKNY 290 (395) T ss_pred HHHHHHHHHHhhcCCcceEEccCCceeEecccChhhhhhhhHHHHHHHHHHHHHHHHHHhCCCHHHhcC--CCccHHHHH Confidence 3333333332 3455688899999999999999999999988776 58999999999999974 445556788 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCc--c Q lcl|Aclame:pro 300 SGMYASALNRYLRPAISELEYKLSDH------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIP--K 371 (392) Q Consensus 300 ~~~~~~~l~p~l~~i~~~l~~~l~~~------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~--~ 371 (392) ++|+++||.|++.+|+++|+.+|++. +.|+++.+++.|.+++++.+..++++|++|+||+|++++..|++. . T Consensus 291 ~~f~~~~L~P~~~~ie~~l~~~Ll~~~e~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl~pi~~~~g 370 (395) T protein:vir:96 291 ELLLEGPIESLITNIVDGLEYAIFDKSETLEGSFIKVTGLKNYDLFSISSQADKLISSGFVFIDEVREEIGLPELPDGLG 370 (395) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhhhcCceeEeecchhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCC Confidence 99999999999999999999999752 457888889999999999999999999999999999985444432 1 Q ss_pred cccc-ccCCCCC--CCCCCCCCCC Q lcl|Aclame:pro 372 DLPA-PENTNKK--TTGQSNEPVP 392 (392) Q Consensus 372 e~~~-~e~~~~~--~~gd~~~p~p 392 (392) |... .-|..|+ .||+.++-.= T Consensus 371 D~~~~~~N~~~~~~~gge~~~~~~ 394 (395) T protein:vir:96 371 KVLYMTKNYESVLERGGEVDEEVE 394 (395) T ss_pred ceeeecccceechhccCCCCCCCC Confidence 2111 1122232 2333222111 No 79 >protein:vir:98643 Length: 395 # NCBI annotation: putative portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1601 # MgeName: phi3396 # Cross-refs: genbank:acc:YP_001039921;genbank:gi:126011096;genbank:GeneID:4818479 Probab=100.00 E-value=7.3e-62 Score=355.76 Aligned_cols=362 Identities=11% Similarity=0.048 Sum_probs=254.0 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ-- 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~-- 80 (392) ||||+++.++....... ... .. ....++.+.++++++|++||++||++||++|++++++... T Consensus 1 MGlf~~~~~~~~~~~~~--------~~~---~~-----~~~~~~~~~~~~~~~v~~~I~~ia~~iA~lp~~~~~~~~~~~ 64 (395) T protein:vir:98 1 MGILDFFSFKKSGTLSD--------DDS---GS-----TTSEKLTNVVLKEDALYKCVNYLARIISKSTFRLKTPEKLTE 64 (395) T ss_pred CcchhhhcCCCcccccc--------ccc---ch-----hhhhhcchhhhhhHHHHHHHHHHHHHHhhCceeEEecCCccc Confidence 99999997554321110 000 01 1123567788999999999999999999999999986432 Q ss_pred -------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcc Q lcl|Aclame:pro 81 -------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPK 153 (392) Q Consensus 81 -------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~ 153 (392) .++.+||++||+++||+.++.+++++||||+++.++..+.+ ++..+..... ....++..+... T Consensus 65 ~~~~~~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~~~-- 134 (395) T protein:vir:98 65 NQKDWLYWINTKANPNQSASQFWVEVIQKLLVDGETLIFVIPGKGIYV------ADSFTQDKKI--SGSQFKVSRVQG-- 134 (395) T ss_pred ccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeCCceec------CCcccccccc--cCcccceeeecC-- Confidence 34569999999999999999999999999999988754322 2222222111 111222223222 Q ss_pred eeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHH--HHHHHHHHHcCCCcceEEEeCCCCCch--HHHHHH Q lcl|Aclame:pro 154 IEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRAS--DRLTISSLNSSLNVPGVLTVKGGGLLS--DKDKAS 229 (392) Q Consensus 154 ~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~--~~~~~~~~~ng~~~~~il~~~~~~~~~--~~~~~~ 229 (392) .....++++++|||+|+.+.++..++.+++......+...... ..+..+++.++..+.+++........+ ++..++ T Consensus 135 ~~~~~~~~~~evih~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (395) T protein:vir:98 135 QTYEKTFTFDQVIYLKNDNSDLMSKVESLWEEYGELLGHVINNQKIANQIRFTMIPPKDKVRERAQENSDGGRQSKSDKD 214 (395) T ss_pred ceeeeEecCccEEEecCCCCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCcHHHHHHHHH Confidence 2234678999999999988777776777777666655544433 445567888888888887765543322 223333 Q ss_pred HHHHHhcc--ccCCceeeccCCceEeecccC------hhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHH Q lcl|Aclame:pro 230 RSRSFMKR--SRSGGPVVLDDLEEFTALEIK------SNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISG 301 (392) Q Consensus 230 ~~~~~~~~--~~~g~~~vl~~g~~~~~l~~~------~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~ 301 (392) +.+.+.+. .+.++++++++|++|++++++ +.++||.+++++++++||++|||||++||+ +.++.+++.++ T Consensus 215 ~~~~~~~~~~~~~~~v~~l~~g~~~~~l~~~~~~~~~~~~~q~~e~~~~~~~~Ia~~fgVP~~~l~~--~~sn~e~~~~~ 292 (395) T protein:vir:98 215 FFKRTVEKIRTESVVGIPVTANTNYEEYGSKNTGAVKSYVDDIKKLKDQYMAEFAEMLGIPISLLHG--DIADNQKNYEL 292 (395) T ss_pred HHHHHHhhhhcCCcceeecCCCceeEecccccccccChhHHHHHHHHHHHHHHHHHHhCCCHHHhcC--CcccHHHHHHH Confidence 33333333 345668889999999999854 577799999999999999999999999974 34556678899 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCc--ccc Q lcl|Aclame:pro 302 MYASALNRYLRPAISELEYKLSDH------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIP--KDL 373 (392) Q Consensus 302 ~~~~~l~p~l~~i~~~l~~~l~~~------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~--~e~ 373 (392) |+++||.|++++|+++|+++|++. +.||.+.+++.|.+++++.+..++++|++|+||+|++++..|++. .|. T Consensus 293 f~~~tl~P~~~~ie~~l~~kll~~~~~~~g~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~~Pi~~~~gD~ 372 (395) T protein:vir:98 293 LLEGPIESLITNIVDGLEYAIFDKSETLQGSFIKVTGLKNYDLFSISNQADKLISSGFVFIDEVREEIGLPELPDGLGKV 372 (395) T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhhcCcceeeehhhhccCHHHHHHHHHHHHhCCCcCHHHHHHHhCCCCCCCCCCce Confidence 999999999999999999998753 457888889999999999999999999999999999985555432 221 Q ss_pred cc-ccCCCCCC--CCCCCCCCC Q lcl|Aclame:pro 374 PA-PENTNKKT--TGQSNEPVP 392 (392) Q Consensus 374 ~~-~e~~~~~~--~gd~~~p~p 392 (392) .. .-++.|+. ||+.++-.= T Consensus 373 ~~~~~n~~~~~~~gge~~~~~~ 394 (395) T protein:vir:98 373 LYMTKNYESVLERGGEVDEEVE 394 (395) T ss_pred eeecccceecccccCCCCCCCC Confidence 11 12333332 333211111 No 80 >protein:vir:79772 Length: 648 # NCBI annotation: portal protein # Family: family:all:3222 # MgeID: mge:1874 # MgeName: 0305phi8-36 # Cross-refs: genbank:acc:YP_001429612;genbank:gi:156564103;genbank:GeneID:5525537 Probab=100.00 E-value=1e-60 Score=349.50 Aligned_cols=370 Identities=8% Similarity=-0.003 Sum_probs=256.6 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccc----hhhhhcchHHHHHHHHHHHhhhhCceeeec Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVS----ARAALRNSDLFSIILQLSSDLAIVKINAEK 76 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~----~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~ 76 (392) ++|..+.++.... ...... ...+.+ -.++ .+....+|.|++||++||++||++||.+.. T Consensus 57 ~~~~~~~r~g~~~---~~~~~g-------~~~~~e-------pp~d~~~l~~l~~~np~V~~aI~iia~~ia~l~~~i~~ 119 (648) T protein:vir:79 57 PKMSLVKRIGLAI---MDGGGG-------GRDFEE-------PEFDFNEITSAYNTEGYVRQAVDKYIEMMFKADWDFVS 119 (648) T ss_pred chhHHHHHhHHHH---HhhcCC-------cccccc-------CCcCHHHHHHHHhcChHHHHHHHHHHHHHhhCcceEEe Confidence 3333333221000 000000 000000 0111 122335899999999999999999999886 Q ss_pred cccc--------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCc---------------eEEEEEeccccce Q lcl|Aclame:pro 77 KKNQ--------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGA---------------DMKWEYLRPSQVN 133 (392) Q Consensus 77 ~~~~--------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~---------------~~~l~~l~~~~v~ 133 (392) +... .++.+||+.||+++|++.++.+++++||+|++++|+.+|. +..+||++|.+|+ T Consensus 120 ~~~~~~~~~~~~~ll~rPn~~~t~~~f~~~l~~~lll~GNAYveiiRd~~G~~~~~l~~~~~~~~~~v~~l~pl~p~~v~ 199 (648) T protein:vir:79 120 KNPNAVEYIRMRFTLMAEATQIPTNQLFIEIAEDLVKYCNVVIAKSRAKDALPFQGMNVMGVGDSMPVAGYFPLNLASMK 199 (648) T ss_pred cCCccchhhHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCeEEEEEecCCCccchhhhhhhhccccceeeeEeecCceeE Confidence 5532 2356999999999999999999999999999999998883 4789999999999 Q ss_pred eeecCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE Q lcl|Aclame:pro 134 TYYFEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGV 213 (392) Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~i 213 (392) +..++++....|.|... +++..+.+++++|||++..++.+..+|+||+.+++.+|..+.++.++..++|+||++|+|+ T Consensus 200 v~~d~~g~~~~Y~y~~~--g~~~~~~~~~~dIIHik~~~~~d~~~GlSpi~~a~~aI~l~~aa~~~~~~fF~NGa~P~gi 277 (648) T protein:vir:79 200 VKRDKFGMIKGWQQEQE--GQDKPQKFKPEDIVHIYYKREKGRAFGTPWLLPALDDIRALRQVEENVLRLVYRNLHPLWH 277 (648) T ss_pred EEEcCCCceeeeEEEec--CCceeEEecCccEEEEccCCCCCCceeccHHHHHHHHHHHHHHHHHHHHHHHhccCCccEE Confidence 99988887766665543 3455678999999999987666677899999999999999999999999999999999999 Q ss_pred EEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeeccc----ChhhHHHHHHHHHHHHHHHHHhcccHHHcCCc Q lcl|Aclame:pro 214 LTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEI----KSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQ 289 (392) Q Consensus 214 l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~----~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~ 289 (392) ++++.+....+..++. .+.+.+.-+ +..+.+++.+++.+++ +++|+||++++++++++||++|||||++||.. T Consensus 278 l~~~~~~~~~e~~k~~-~e~~~~~~~--~~~i~gg~v~~~~~~i~~~~s~~dlqfle~rk~~~~eIa~aFgVPP~lLG~~ 354 (648) T protein:vir:79 278 VKVGLEQEGFGAEEGE-VDLVRGEVE--NMDVEGGMVTTERVNISSIASNQIIDAKEYLKHFEQRAFTVLGVSELMMGRG 354 (648) T ss_pred EEeCCCccchHHHHHH-HHHHHHhcc--cccccccccccceeeccccCCHHHHHHHHHHHHHHHHHHHHhCCCHhHcccC Confidence 9986443333322222 222222111 1233344444444333 56899999999999999999999999999976 Q ss_pred cccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------------hhcccchhhhhcchHHHHHHHHHHHhCC Q lcl|Aclame:pro 290 GDQQ-SSIQQISGMYASALNRYLRPAISELEYKLSD----------------HISVNMRPAIDPLGDNYLSTISTATRWG 352 (392) Q Consensus 290 ~~~~-~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~----------------~~~~d~~~~~~~~~~~~~~~~~~~~~~g 352 (392) ++.+ ++.++...++..++.|+..+++..++.++.+ .++|+...+++.|...+++.+..++++| T Consensus 355 ~~ss~stae~~~~~~~~~i~~l~~~i~~~le~~~~~~ll~e~~l~~~l~~d~~ieF~~~~Llr~D~~~~a~~~~~l~~~G 434 (648) T protein:vir:79 355 GTASRSTGDNLSSDFKDRIKALQKVMATFINEFMVKEILMEGGFDPVLNPDDKVEFRFNEIDMDSKIKLENQAVFLYEHN 434 (648) T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccccceEEEeecccchhhHHHHHHHHHHHHhCC Confidence 5443 5566777788889999888887776654421 2467777777888888888899999999 Q ss_pred CcCHHHHHHHHHhCCCCccccccccCCCCCCC-----CCCCCCCC Q lcl|Aclame:pro 353 ALAENQATFVLQEAGYIPKDLPAPENTNKKTT-----GQSNEPVP 392 (392) Q Consensus 353 ~~T~nE~R~~l~~~g~~~~e~~~~e~~~~~~~-----gd~~~p~p 392 (392) ++|+||+|++++..|++..+.+..-..++.+. .+..+|.| T Consensus 435 ilT~NEaR~~lGlpPi~~g~~~~~l~~~~~~~~~~~~~~~~~~~~ 479 (648) T protein:vir:79 435 AISEDEMRELIGRDPVDDGEGRAKMHLQMVTIAQATALAALAPTP 479 (648) T ss_pred CcCHHHHHHHhCCCCCCCCCCccccccccccchhccccccCCCCC Confidence 99999999988544443222111111111110 01111222 No 81 >protein:vir:99312 Length: 563 # NCBI annotation: putative portal protein # Family: family:all:2446 # MgeID: mge:1655 # MgeName: K # Cross-refs: genbank:acc:YP_024471;genbank:gi:48696430;genbank:GeneID:2948040 Probab=100.00 E-value=1.4e-60 Score=348.78 Aligned_cols=389 Identities=11% Similarity=0.014 Sum_probs=257.2 Q ss_pred CcchhhHhhcccccccccccccccccccch--hhhhhhhcCCC-C--cccchhhhhcchHHHHHHHHHHHhhhh------ Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGND--AQIMESLLGDN-N--EWVSARAALRNSDLFSIILQLSSDLAI------ 69 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~--~~v~~~~a~~~~~v~~~i~~ia~~ia~------ 69 (392) -.-..++.+.+....... .+..++....+ ..+........ . ....-+..-.++.+.+||+.+++.+|+ T Consensus 38 ~~~~~~~~~~~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~n~i~~~~I~t~~~~vA~~~~~~~ 116 (563) T protein:vir:99 38 QDNKEYQDLTKSLYGQQQ-AYAEPFIEMMDTNPEFRDKRSYMKNEHNLHDVLKKFGNNPILNAIILTRSNQVAMYCQPAR 116 (563) T ss_pred ccchhHHHHHhhhccCCC-cchhhhHhhhcccccccccccCCCCcccHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhhh Confidence 111122222222111111 11122211110 01111000000 0 000112222457788899988888885 Q ss_pred -------Cceeeeccccc-------------ccc----ccCCcc-CCHHHHHHHHHHHHHHhCCeeEEEe--eccCCceE Q lcl|Aclame:pro 70 -------VKINAEKKKNQ-------------GII----DNPSTN-ANKHGFWQSMFAQLLLGGEAFAYRW--RNANGADM 122 (392) Q Consensus 70 -------~p~~~~~~~~~-------------~~~----~~PN~~-~s~~~f~~~~~~~l~l~Gn~~~~i~--r~~~G~~~ 122 (392) +|+++++++.. ..+ ..||+. +|+++|++.++.+++++||+|++++ |+..|+++ T Consensus 117 ~~~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~~lll~Gn~~~~~~~~rd~~G~~~ 196 (563) T protein:vir:99 117 YSEKGLGFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDVDRDSFQTFCKKIVRDTYIYDQVNFEKVFNKNNKTKLE 196 (563) T ss_pred hhcccccceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHhcCCeEEEEEEEecCCCceE Confidence 57777654321 011 123333 6899999999999999999999865 77889999 Q ss_pred EEEEeccccceeeecCccceEEE---EEEecCcceeeeEEEeceeEEEe-cCCCcc--cccccCCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 123 KWEYLRPSQVNTYYFEYENGMYY---NITFDDPKIEPILQAPQSDLIHM-KLLSID--GGKTGISPLYSLRRESKIQRAS 196 (392) Q Consensus 123 ~l~~l~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~vih~-~~~~~~--~~~~G~s~~~~~~~~i~~~~~~ 196 (392) +|||++|+.|++..+.++..+.. +++.. .++....++++++||+ +++..+ ...+|+||+..++.+|..+.++ T Consensus 197 ~L~pl~p~~V~v~~~~~g~~~~~~~~y~~~~--~g~~~~~~~~~evI~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~~ 274 (563) T protein:vir:99 197 KFIAVDPSTIFYATDKKGKIIKGGKRFVQVV--DKRVVASFTSRELAMGIRNPRTELSSSGYGLSEVEIAMKEFIAYNNT 274 (563) T ss_pred EEEEeCCceeEEEECCCCceeccceeEEEEe--CCceeEEecCcceEEEeccCCCCcccCcccchHHHHHHHHHHHHHHH Confidence 99999999999998887755421 11221 2334567888887755 454433 2567999999999999999999 Q ss_pred HHHHHHHHHcCCCcceEEEeCCCC--Cch--HHHHHHHHHHHhccccCCce-eeccCCceEeecccChhhHHHHHHHHHH Q lcl|Aclame:pro 197 DRLTISSLNSSLNVPGVLTVKGGG--LLS--DKDKASRSRSFMKRSRSGGP-VVLDDLEEFTALEIKSNVAQLLSQTDWT 271 (392) Q Consensus 197 ~~~~~~~~~ng~~~~~il~~~~~~--~~~--~~~~~~~~~~~~~~~~~g~~-~vl~~g~~~~~l~~~~~d~~~~e~~~~~ 271 (392) ++++.++|+||++|+|||+++.+. +++ ++.++.|.+.+.|..|+|++ +|+++|++|++++.+++|+||+|+++++ T Consensus 275 ~~~~~~~f~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl~~G~~~~~l~~~~~d~qfle~~~~~ 354 (563) T protein:vir:99 275 ESFNDRFFSHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGINGSWQIPVVMADDIKFVNMTPTANDMQFEKWLNYL 354 (563) T ss_pred HHHHHHHHHccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceEEcCCCceEEeccCChhHHHHHHHHHHH Confidence 999999999999999999998653 333 23456777788899999996 7899999999999999999999999999 Q ss_pred HHHHHHHhcccHHHcCCcccc-------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchh-hhhcc Q lcl|Aclame:pro 272 SKQYAKVYGLPDSYIGGQGDQ-------------QSSIQQISGMYASALNRYLRPAISELEYKLSDHISVNMRP-AIDPL 337 (392) Q Consensus 272 ~~~Ia~~fgVP~~~lg~~~~~-------------~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~~~~d~~~-~~~~~ 337 (392) +++||++|||||++||..+.+ .+..++...|++.||.|+++.|+++|+.+|++.++..... +++.| T Consensus 355 ~~~Ia~afgVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~~~tL~P~l~~ie~~ln~~L~~~~~~~~~~~f~r~D 434 (563) T protein:vir:99 355 INIISALYGIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQNKGLQPLLRFIEDLVNRHIISEYGDKYTFQFVGGD 434 (563) T ss_pred HHHHHHHhCCCHHHccccccccccccccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcccccEEEeccCC Confidence 999999999999999964332 1234566789999999999999999999998764332221 24556 Q ss_pred hHHHHHHH--HHHHhCCCcCHHHHHHHHHhCCCCccccccc-cCCCCC---------------------C---CCCCCCC Q lcl|Aclame:pro 338 GDNYLSTI--STATRWGALAENQATFVLQEAGYIPKDLPAP-ENTNKK---------------------T---TGQSNEP 390 (392) Q Consensus 338 ~~~~~~~~--~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~-e~~~~~---------------------~---~gd~~~p 390 (392) ...+.+.+ ..++++|++|+||+|++++..+++..|.... -++.+. . .+++.+| T Consensus 435 ~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~Pi~gGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (563) T protein:vir:99 435 TKSATDKLNILKLETQIFKTVNEAREEQGKKPIEGGDIILDASFLQGTAQLQQDKQYNDGKQKERLQMMMSLLEGDNDDS 514 (563) T ss_pred HHHHHHHHHHHHHhcCCccCHHHHHHHhCCCCCCCcceeecccccccccccccccCCCccccchhhhhcccccCCCCCCC Confidence 66666544 3568899999999999986655543332211 011110 0 0111111 Q ss_pred CC Q lcl|Aclame:pro 391 VP 392 (392) Q Consensus 391 ~p 392 (392) .| T Consensus 515 ~~ 516 (563) T protein:vir:99 515 EE 516 (563) T ss_pred CC Confidence 11 No 82 >protein:vir:95599 Length: 563 # NCBI annotation: ORF014 # Family: family:all:2446 # MgeID: mge:1577 # MgeName: G1 # Cross-refs: genbank:acc:YP_240900;genbank:gi:66394963;genbank:GeneID:5132540 Probab=100.00 E-value=1.4e-60 Score=348.78 Aligned_cols=389 Identities=11% Similarity=0.014 Sum_probs=257.2 Q ss_pred CcchhhHhhcccccccccccccccccccch--hhhhhhhcCCC-C--cccchhhhhcchHHHHHHHHHHHhhhh------ Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGND--AQIMESLLGDN-N--EWVSARAALRNSDLFSIILQLSSDLAI------ 69 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~--~~v~~~~a~~~~~v~~~i~~ia~~ia~------ 69 (392) -.-..++.+.+....... .+..++....+ ..+........ . ....-+..-.++.+.+||+.+++.+|+ T Consensus 38 ~~~~~~~~~~~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~n~i~~~~I~t~~~~vA~~~~~~~ 116 (563) T protein:vir:95 38 QDNKEYQDLTKSLYGQQQ-AYAEPFIEMMDTNPEFRDKRSYMKNEHNLHDVLKKFGNNPILNAIILTRSNQVAMYCQPAR 116 (563) T ss_pred ccchhHHHHHhhhccCCC-cchhhhHhhhcccccccccccCCCCcccHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhhh Confidence 111122222222111111 11122211110 01111000000 0 000112222457788899988888885 Q ss_pred -------Cceeeeccccc-------------ccc----ccCCcc-CCHHHHHHHHHHHHHHhCCeeEEEe--eccCCceE Q lcl|Aclame:pro 70 -------VKINAEKKKNQ-------------GII----DNPSTN-ANKHGFWQSMFAQLLLGGEAFAYRW--RNANGADM 122 (392) Q Consensus 70 -------~p~~~~~~~~~-------------~~~----~~PN~~-~s~~~f~~~~~~~l~l~Gn~~~~i~--r~~~G~~~ 122 (392) +|+++++++.. ..+ ..||+. +|+++|++.++.+++++||+|++++ |+..|+++ T Consensus 117 ~~~~~~~~~i~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~~t~~~f~~~lv~~lll~Gn~~~~~~~~rd~~G~~~ 196 (563) T protein:vir:95 117 YSEKGLGFEVRLRDLDAEPGRKEKEEMKRIEDFIVNTGKDKDVDRDSFQTFCKKIVRDTYIYDQVNFEKVFNKNNKTKLE 196 (563) T ss_pred hhcccccceeEEeecCCCcchhhhhhhHHHHHHhhhcCCCCCCCcchHHHHHHHHHHHHHhcCCeEEEEEEEecCCCceE Confidence 57777654321 011 123333 6899999999999999999999865 77889999 Q ss_pred EEEEeccccceeeecCccceEEE---EEEecCcceeeeEEEeceeEEEe-cCCCcc--cccccCCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 123 KWEYLRPSQVNTYYFEYENGMYY---NITFDDPKIEPILQAPQSDLIHM-KLLSID--GGKTGISPLYSLRRESKIQRAS 196 (392) Q Consensus 123 ~l~~l~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~vih~-~~~~~~--~~~~G~s~~~~~~~~i~~~~~~ 196 (392) +|||++|+.|++..+.++..+.. +++.. .++....++++++||+ +++..+ ...+|+||+..++.+|..+.++ T Consensus 197 ~L~pl~p~~V~v~~~~~g~~~~~~~~y~~~~--~g~~~~~~~~~evI~~~~~~~~d~~~~~~G~Spi~~a~~~i~~~~~~ 274 (563) T protein:vir:95 197 KFIAVDPSTIFYATDKKGKIIKGGKRFVQVV--DKRVVASFTSRELAMGIRNPRTELSSSGYGLSEVEIAMKEFIAYNNT 274 (563) T ss_pred EEEEeCCceeEEEECCCCceeccceeEEEEe--CCceeEEecCcceEEEeccCCCCcccCcccchHHHHHHHHHHHHHHH Confidence 99999999999998887755421 11221 2334567888887755 454433 2567999999999999999999 Q ss_pred HHHHHHHHHcCCCcceEEEeCCCC--Cch--HHHHHHHHHHHhccccCCce-eeccCCceEeecccChhhHHHHHHHHHH Q lcl|Aclame:pro 197 DRLTISSLNSSLNVPGVLTVKGGG--LLS--DKDKASRSRSFMKRSRSGGP-VVLDDLEEFTALEIKSNVAQLLSQTDWT 271 (392) Q Consensus 197 ~~~~~~~~~ng~~~~~il~~~~~~--~~~--~~~~~~~~~~~~~~~~~g~~-~vl~~g~~~~~l~~~~~d~~~~e~~~~~ 271 (392) ++++.++|+||++|+|||+++.+. +++ ++.++.|.+.+.|..|+|++ +|+++|++|++++.+++|+||+|+++++ T Consensus 275 ~~~~~~~f~ng~~p~giL~~~~~~~ls~e~~~~~~~~~~~~~~G~~nagk~~~vl~~G~~~~~l~~~~~d~qfle~~~~~ 354 (563) T protein:vir:95 275 ESFNDRFFSHGGTTRGILQIRSDQQQSQHALENFKREWKSSLSGINGSWQIPVVMADDIKFVNMTPTANDMQFEKWLNYL 354 (563) T ss_pred HHHHHHHHHccCCCceEEEeCCCCCCCHHHHHHHHHHHHHHhccccccccceEEcCCCceEEeccCChhHHHHHHHHHHH Confidence 999999999999999999998653 333 23456777788899999996 7899999999999999999999999999 Q ss_pred HHHHHHHhcccHHHcCCcccc-------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchh-hhhcc Q lcl|Aclame:pro 272 SKQYAKVYGLPDSYIGGQGDQ-------------QSSIQQISGMYASALNRYLRPAISELEYKLSDHISVNMRP-AIDPL 337 (392) Q Consensus 272 ~~~Ia~~fgVP~~~lg~~~~~-------------~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~~~~d~~~-~~~~~ 337 (392) +++||++|||||++||..+.+ .+..++...|++.||.|+++.|+++|+.+|++.++..... +++.| T Consensus 355 ~~~Ia~afgVPp~~lG~~~~~~~~~~~~~ss~~~sn~e~~~~~f~~~tL~P~l~~ie~~ln~~L~~~~~~~~~~~f~r~D 434 (563) T protein:vir:95 355 INIISALYGIDPAEIGFPNRGGATGSKGGSTLNEADPGKKQQQSQNKGLQPLLRFIEDLVNRHIISEYGDKYTFQFVGGD 434 (563) T ss_pred HHHHHHHhCCCHHHccccccccccccccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhcccccEEEeccCC Confidence 999999999999999964332 1234566789999999999999999999998764332221 24556 Q ss_pred hHHHHHHH--HHHHhCCCcCHHHHHHHHHhCCCCccccccc-cCCCCC---------------------C---CCCCCCC Q lcl|Aclame:pro 338 GDNYLSTI--STATRWGALAENQATFVLQEAGYIPKDLPAP-ENTNKK---------------------T---TGQSNEP 390 (392) Q Consensus 338 ~~~~~~~~--~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~-e~~~~~---------------------~---~gd~~~p 390 (392) ...+.+.+ ..++++|++|+||+|++++..+++..|.... -++.+. . .+++.+| T Consensus 435 ~~~~~e~~~~~~~~~~G~lT~NE~R~~~gl~Pi~gGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (563) T protein:vir:95 435 TKSATDKLNILKLETQIFKTVNEAREEQGKKPIEGGDIILDASFLQGTAQLQQDKQYNDGKQKERLQMMMSLLEGDNDDS 514 (563) T ss_pred HHHHHHHHHHHHHhcCCccCHHHHHHHhCCCCCCCcceeecccccccccccccccCCCccccchhhhhcccccCCCCCCC Confidence 66666544 3568899999999999986655543332211 011110 0 0111111 Q ss_pred CC Q lcl|Aclame:pro 391 VP 392 (392) Q Consensus 391 ~p 392 (392) .| T Consensus 515 ~~ 516 (563) T protein:vir:95 515 EE 516 (563) T ss_pred CC Confidence 11 No 83 >protein:vir:94002 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1487 # MgeName: jj50 # Cross-refs: genbank:acc:YP_764318;genbank:gi:115315632;genbank:GeneID:5176589 Probab=100.00 E-value=1.2e-60 Score=349.07 Aligned_cols=328 Identities=14% Similarity=0.102 Sum_probs=237.7 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||+.+.............. +..+ .+...++..++|++||++||++||++|+++++... T Consensus 1 Mg~f~~~~~~~~~~~~~~~~~----------~~~~-------~~~~~~~~~~~v~~~v~~IA~~iA~lp~~~~~~~~~~~ 63 (378) T protein:vir:94 1 MNLFGKVVSFSRGKLNNDTQR----------VTAW-------QNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDV 63 (378) T ss_pred CCccccchhcccccccCCcce----------eeee-------ccchhHHHHHHHHHHHHHHHhhhhhCceeeEEEcccCc Confidence 999988764432221111110 0011 11223456688999999999999999999875421 Q ss_pred --------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeecc-CCceEEEEEeccccceeeecCccceEE Q lcl|Aclame:pro 80 --------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNA-NGADMKWEYLRPSQVNTYYFEYENGMY 144 (392) Q Consensus 80 --------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~-~G~~~~l~~l~~~~v~~~~~~~~~~~~ 144 (392) ..++.+||++||+++||+.++.+++++||+|++++++. .|+++.++|.. T Consensus 64 ~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~~~~~g~~~~l~p~~---------------- 127 (378) T protein:vir:94 64 GSDTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLSAPYVDLYAVFDDNTGELLDLLFAD---------------- 127 (378) T ss_pred ccccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeeCCCceEEEEEecC---------------- Confidence 12345899999999999999999999999999877554 57776665521 Q ss_pred EEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH Q lcl|Aclame:pro 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~ 224 (392) ....+++++|||++++ .+...|.||++.++..+... +++ +.++|++++++..+++. T Consensus 128 -----------~~~~~~~~diiH~~~~--~~~~~g~s~l~~~~~~i~~~----------~~~-~~~~gil~~~~~l~~~~ 183 (378) T protein:vir:94 128 -----------DKKEYKPEELVRLTSP--FYINEDTSILDNALASIQTK----------LEQ-GKLRGLLKINAFLDIDN 183 (378) T ss_pred -----------CeeEeeeeeeEEecCc--CCccchhHHHHHHHHHHHHH----------Hhc-ccccceeeeCCcCCHHH Confidence 1135678999999975 33456999999888876533 333 46899999998766543 Q ss_pred --HHHHHHHHHH---hccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHH Q lcl|Aclame:pro 225 --KDKASRSRSF---MKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQI 299 (392) Q Consensus 225 --~~~~~~~~~~---~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~ 299 (392) +.++++.+.+ .+..++|++++|++|++|++++.+++++|+ +.+++++++||++|||||++|++ +.+.++. T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVP~~~l~~----~~se~~~ 258 (378) T protein:vir:94 184 TQEYREKALTTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG----TASQEQQ 258 (378) T ss_pred HHHHHHHHHHHHHHhhcccccccceecCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC----ChHHHHH Confidence 2334444444 345678899999999999999999999996 67789999999999999999964 3345678 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh--------------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHh Q lcl|Aclame:pro 300 SGMYASALNRYLRPAISELEYKLSDH--------------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQE 365 (392) Q Consensus 300 ~~~~~~~l~p~l~~i~~~l~~~l~~~--------------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~ 365 (392) .+|++.||.|++++|+++|+.+|++. ++||.+.+++.|.+++++.+.+++++|++|+||+|++++. T Consensus 259 ~~f~~~tL~P~~~~ie~~l~~~Ll~~~er~~g~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~gl 338 (378) T protein:vir:94 259 IYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGE 338 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhcccccceeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCC Confidence 89999999999999999999999752 5688999999999999999999999999999999999855 Q ss_pred CCCCcccccc-ccCCCCCCCCCCCCCC-----C Q lcl|Aclame:pro 366 AGYIPKDLPA-PENTNKKTTGQSNEPV-----P 392 (392) Q Consensus 366 ~g~~~~e~~~-~e~~~~~~~gd~~~p~-----p 392 (392) .|++..|... .-+..|+...+.+++. | T Consensus 339 ~p~~gGD~~~~~~n~~~~~~~~~~~~~~~~~~~ 371 (378) T protein:vir:94 339 QPIEGGDVYIANLNAVAVKNLSDLQGSRKDVTS 371 (378) T ss_pred CCCCCCCeeeecccccccccchhhcCCcCCCCC Confidence 5554333211 1122222111111100 0 No 84 >protein:vir:93867 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1479 # MgeName: 712 # Cross-refs: genbank:acc:YP_764264;genbank:gi:115315577;genbank:GeneID:5141561 Probab=100.00 E-value=1.2e-59 Score=343.65 Aligned_cols=328 Identities=14% Similarity=0.119 Sum_probs=236.6 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||+.+.............. .. .+ .+...++..++|++||++||++||++|++++++.. T Consensus 1 Mg~f~~~~~f~~~~~~~~~~~---------~~-~~-------~~~~~~~~~~~v~~~i~~Ia~~iA~lp~~~~~~~~~~~ 63 (378) T protein:vir:93 1 MNLFGKVVSFSRGKLNNDTQR---------VT-AW-------QNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDV 63 (378) T ss_pred CccchhhhhhhccccCCCcce---------ee-ec-------ccchhHHHHHHHHHHHHHHHhhhhhCceeeEEEccccc Confidence 999998764332111111000 00 11 11223556788999999999999999999886432 Q ss_pred --------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC-CceEEEEEeccccceeeecCccceEE Q lcl|Aclame:pro 80 --------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN-GADMKWEYLRPSQVNTYYFEYENGMY 144 (392) Q Consensus 80 --------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~-G~~~~l~~l~~~~v~~~~~~~~~~~~ 144 (392) ..++.+||++||+++||+.++.+++++||+|++++++.. |++..++|.. T Consensus 64 ~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gn~~i~~~~~~~~g~~~~l~~~~---------------- 127 (378) T protein:vir:93 64 GSDTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFAD---------------- 127 (378) T ss_pred ccccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEecC---------------- Confidence 123458999999999999999999999999999887643 6665555421 Q ss_pred EEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH Q lcl|Aclame:pro 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~ 224 (392) ...++++++|||++++ .+...|.|++..++..+. +++.+| .++|++++++..+++. T Consensus 128 -----------~~~~~~~~diih~r~~--~~~~~~~s~l~~~~~~i~----------~~~~~~-~~~g~l~~~~~l~~~~ 183 (378) T protein:vir:93 128 -----------DKKEYKTEELVRLTSP--FYINEDTSILDNALASIQ----------TKLEQG-KLRGLLKINAFLDIDN 183 (378) T ss_pred -----------CeeEeccceeEEecCc--cccchhhHHHHHHHHHHH----------HHHhcC-cccceeeeCCcCCHHH Confidence 1235788999999964 233458899888776553 344554 5999999988765542 Q ss_pred --HHHHHHHHHH---hccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHH Q lcl|Aclame:pro 225 --KDKASRSRSF---MKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQI 299 (392) Q Consensus 225 --~~~~~~~~~~---~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~ 299 (392) +.++++.+.+ .+..++|++++|++|++|++++.+++|+|+ +.+++++++||++|||||++|++ +.+.++. T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~g----~~~e~~~ 258 (378) T protein:vir:93 184 TQEYREKALTTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG----TATQEQQ 258 (378) T ss_pred HHHHHHHHHHHHHHhhcccccccceEcCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC----CcHHHHH Confidence 3344444433 455678899999999999999999999996 67789999999999999999964 2335678 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh--------------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHh Q lcl|Aclame:pro 300 SGMYASALNRYLRPAISELEYKLSDH--------------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQE 365 (392) Q Consensus 300 ~~~~~~~l~p~l~~i~~~l~~~l~~~--------------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~ 365 (392) ..|++.||.|++++|+++|+++|++. ++||.+.+++.|.+++++.+..++++|++|+||+|++++. T Consensus 259 ~~f~~~tl~P~~~~ie~~l~~kLl~~~er~~~~~~~~~~~~~fd~~~l~~~d~~~~~~~~~~~~~~G~~t~NE~R~~~gl 338 (378) T protein:vir:93 259 IYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGE 338 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCC Confidence 89999999999999999999999742 6788899999999999999999999999999999999865 Q ss_pred CCCCccccccc-cCCCCCC------CCCCCCCCC Q lcl|Aclame:pro 366 AGYIPKDLPAP-ENTNKKT------TGQSNEPVP 392 (392) Q Consensus 366 ~g~~~~e~~~~-e~~~~~~------~gd~~~p~p 392 (392) .+++..|.... -+..|+. .+..+++.. T Consensus 339 ~p~~ggD~~~~~~n~~~~~~~~~~~~~~~~~~~~ 372 (378) T protein:vir:93 339 QPIEGGDVYIANLNAVAVKNLSDLQGSRKDVTST 372 (378) T ss_pred CCCCCCCeeeeccccccccchhhhcCccCCCCCC Confidence 55543332111 1211111 111111111 No 85 >protein:vir:1661 Length: 378 # NCBI annotation: unknown # Family: family:all:2379 # MgeID: mge:34 # MgeName: sk1 # Cross-refs: genbank:acc:NP_044950;genbank:gi:9629657;genbank:GeneID:1261302 Probab=100.00 E-value=1.4e-59 Score=343.22 Aligned_cols=326 Identities=15% Similarity=0.126 Sum_probs=235.5 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||+.+.+............ +. .+ .+...++..++|++||++||++||+||++++++.. T Consensus 1 Mg~f~~~~~~~~~~~~~~~~~---------~~-~~-------~~~~~~~~~~~v~~~i~~Ia~~iA~l~~~~~~~~~~~~ 63 (378) T protein:vir:16 1 MNLFGKVVSFSRGKLNNDTQR---------VT-AW-------QNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDV 63 (378) T ss_pred CccchhhhhhhcccccCCcce---------ee-ec-------ccchhhHHHHHHHHHHHHHHhhhhhCceeEEEEccccc Confidence 999987764332211111000 00 01 11223567788999999999999999999876432 Q ss_pred --------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC-CceEEEEEeccccceeeecCccceEE Q lcl|Aclame:pro 80 --------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN-GADMKWEYLRPSQVNTYYFEYENGMY 144 (392) Q Consensus 80 --------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~-G~~~~l~~l~~~~v~~~~~~~~~~~~ 144 (392) +.++.+||++||+++||+.++.+++++||+|++++++.. |++..++|.. T Consensus 64 ~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gna~i~~~~d~~~g~~~~l~~~~---------------- 127 (378) T protein:vir:16 64 GSDTLISMAGSDLDEVLNWSPKGERNSMDFWRKVIKKLLRAPYVDLYAVFDDNTGELLDLLFAD---------------- 127 (378) T ss_pred ccccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCceEEEEEeecCCceEEEEEecC---------------- Confidence 123458999999999999999999999999999988754 5555544421 Q ss_pred EEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH Q lcl|Aclame:pro 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~ 224 (392) ....+++++|||+|++. +...|.|++..+...+.. .+. ++.++|+++.++..+++. T Consensus 128 -----------~~~~~~~~diih~r~~~--~~~~~~s~l~~~~~~i~~----------~~~-~~~~~g~l~~~~~l~~~~ 183 (378) T protein:vir:16 128 -----------DKKEYKPEELVRLTSPF--YINEDTSILDNALASIQT----------KLE-QGKLRGLLKINAFLDIDN 183 (378) T ss_pred -----------CeeEecccceEEecCcc--CccchhHHHHHHHHHHHH----------HHh-cCccceeeEeCCcCCHHH Confidence 12356789999999642 334588998888766532 333 456899999988765543 Q ss_pred --HHHHHHHHHH---hccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHH Q lcl|Aclame:pro 225 --KDKASRSRSF---MKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQI 299 (392) Q Consensus 225 --~~~~~~~~~~---~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~ 299 (392) +.++++.+.+ .+..++|++++|++|++|++++.+++|+|+ +.+++++++||++|||||.+|++ +++.++. T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~g----~~~e~~~ 258 (378) T protein:vir:16 184 TQEYREKALTTIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLG----TASQEQQ 258 (378) T ss_pred HHHHHHHHHHHHHHhhcccccccceEcCCCceEEEccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC----CchHHHH Confidence 3334444443 455688999999999999999999999997 55689999999999999999964 3345778 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh--------------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHh Q lcl|Aclame:pro 300 SGMYASALNRYLRPAISELEYKLSDH--------------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQE 365 (392) Q Consensus 300 ~~~~~~~l~p~l~~i~~~l~~~l~~~--------------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~ 365 (392) .+|+++||.|++++|+++|+.+|++. ++||.+.+++.|.+++++.+.+++++|++|+||+|++++. T Consensus 259 ~~f~~~tl~P~~~~ie~~l~~kLl~~~e~~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~~g~ 338 (378) T protein:vir:16 259 IYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGE 338 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhhhhhhhhcccccceeeccchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCC Confidence 99999999999999999999998742 5688899999999999999999999999999999999865 Q ss_pred CCCCcccccc-ccCCCCC--------------CCCCCCCC Q lcl|Aclame:pro 366 AGYIPKDLPA-PENTNKK--------------TTGQSNEP 390 (392) Q Consensus 366 ~g~~~~e~~~-~e~~~~~--------------~~gd~~~p 390 (392) .+++..|... .-+..|+ ++++.++- T Consensus 339 ~p~~ggD~~~~~~n~~~~~~~~~~~~~~~~~~~~~e~~ne 378 (378) T protein:vir:16 339 QPIEGGDVYIANLNAVAVKNLSDLQGSRKDVTSTDETNNQ 378 (378) T ss_pred CCCCCCCeEeeccccccccchhhhcCccCCCCCCCCCCCC Confidence 5554333111 1121111 11111111 No 86 >protein:vir:94869 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:1532 # MgeName: P008 # Cross-refs: genbank:acc:YP_762515;genbank:gi:115304214;genbank:GeneID:5141182 Probab=100.00 E-value=2.8e-58 Score=336.15 Aligned_cols=328 Identities=14% Similarity=0.130 Sum_probs=232.4 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||+.+++......... . ...+. .+....++..++|++||++||++||+||++++++.. T Consensus 1 M~if~~~~~~~~~~~~~~--------~-~~~~~--------~~~~~~~~~~~~v~~~v~~Ia~~iA~lp~~~~~~~~~~~ 63 (378) T protein:vir:94 1 MNLFGKVVSFSRGKLNND--------T-QRVTA--------WQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDV 63 (378) T ss_pred CchhHHhHhhhhcccccC--------c-ceeee--------eecchhhhhhHHHHHHHHHHHHhHhhCceeeeeeccccc Confidence 999998875432111110 0 01111 123344567789999999999999999999876421 Q ss_pred --------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEe-eccCCceEEEEEeccccceeeecCccceEE Q lcl|Aclame:pro 80 --------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRW-RNANGADMKWEYLRPSQVNTYYFEYENGMY 144 (392) Q Consensus 80 --------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~-r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~ 144 (392) +.++.+||++||+++||+.++.++++.||+|++++ ++.+|++..+++. T Consensus 64 ~~~~~~~~~~~~l~~lLn~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~~----------------- 126 (378) T protein:vir:94 64 GSDTLISMAGSDLDEVLNWSSKGERNSMEFWQKVIKKLLTTRYIDLYPIFDSETGELLDLLFA----------------- 126 (378) T ss_pred ccccccccccchHHHHHhhcCCCCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCCcEEEEEEe----------------- Confidence 23456899999999999999999999999999854 4445655444331 Q ss_pred EEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH Q lcl|Aclame:pro 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~ 224 (392) .+ ..++++++|+|++.+...+. +.+++..+...+.. .+++ +.++|+++.+...+++. T Consensus 127 -----~~-----~~~~~~~dvih~~~~~~~~~--~~~~~~~~~~~~~~----------~~~~-~~~~g~l~~~~~l~~~~ 183 (378) T protein:vir:94 127 -----ND-----KKEYKPEELVRLTSPFYINE--DTSILDNALASIQT----------KLEQ-GKLRGLLKINAFLDIDN 183 (378) T ss_pred -----cC-----cEEechhceeeecCcCCccc--chhHHHHHHHHHHH----------HHhh-CCcccceeeCCcCCHHH Confidence 11 13578899999996544332 56777766654432 2233 46889999988766542 Q ss_pred --HHHHHHHH---HHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHH Q lcl|Aclame:pro 225 --KDKASRSR---SFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQI 299 (392) Q Consensus 225 --~~~~~~~~---~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~ 299 (392) +.++++.+ .+.+..++|++++|++|++|++++.+++++|+ +.+++++++||++|||||++|+++ .+.++. T Consensus 184 ~~~~~e~~~~~~~~~~~~~n~~~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgvPp~~l~g~----~~e~~~ 258 (378) T protein:vir:94 184 TQEYREKALATIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIDLIKSELLTGYFMNENILLGT----ATQEQQ 258 (378) T ss_pred HHHHHHHHHHHHHHhhcccccccceeccCCceEEEccCChHHhhH-HHHHHHHHHHHHHhCCCHHHhcCC----chHHHH Confidence 22333333 34556778889999999999999999999996 778999999999999999999642 335677 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh--------------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHh Q lcl|Aclame:pro 300 SGMYASALNRYLRPAISELEYKLSD--------------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQE 365 (392) Q Consensus 300 ~~~~~~~l~p~l~~i~~~l~~~l~~--------------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~ 365 (392) .+|++.||.|++.+|+++|+.+|++ ++.||...+++.|.+++++.+..++++|++|+||+|++++. T Consensus 259 ~~f~~~tl~P~~~~ie~~l~~~Ll~~~e~~~g~~~~~~~~~~f~~~~l~~~d~~~~~e~~~~~~~~G~~t~NE~R~~~g~ 338 (378) T protein:vir:94 259 IYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGE 338 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhHhhhhhhhcccceeEeecchhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCC Confidence 8999999999999999999999863 25688899999999999999999999999999999999866 Q ss_pred CCCCccccccc-cCCCCC------CCCCCCCCCC Q lcl|Aclame:pro 366 AGYIPKDLPAP-ENTNKK------TTGQSNEPVP 392 (392) Q Consensus 366 ~g~~~~e~~~~-e~~~~~------~~gd~~~p~p 392 (392) .|++..|.... -+..++ .+++.+.... T Consensus 339 ~p~~ggd~~~~~~n~~~~~~~~~~~~~~~~~~~~ 372 (378) T protein:vir:94 339 QPIEGGDVYIANLNAVAVKNLSDLQGNRKDVTST 372 (378) T ss_pred CCCCCCCeeeecccccchhcchhcccccCCCCCC Confidence 66543332111 111111 1111111100 No 87 >protein:vir:858 Length: 378 # NCBI annotation: putative portal protein # Family: family:all:2379 # MgeID: mge:18 # MgeName: bIL170 # Cross-refs: genbank:acc:NP_047117;genbank:gi:9630570;genbank:GeneID:1261758 Probab=100.00 E-value=1.5e-57 Score=332.09 Aligned_cols=328 Identities=14% Similarity=0.121 Sum_probs=228.7 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||+.++........... ...+. .++...++..++|++||++||++||+||++++++.. T Consensus 1 M~~f~k~~~~~~~~~~~~~---------~~~~~--------~~~~~~~~~~~~v~~~v~~ia~~iA~lp~~~~~~~~~~~ 63 (378) T protein:vir:85 1 MNLFGKVVSFSRGKLNNDT---------QRVTA--------WQNEAVEYTSAFVTNIHNKIANEITKVEFNHVKYKKSDV 63 (378) T ss_pred CchhhhhhhhhhcccccCC---------cceee--------eeccchhhhhHHHHHHHHHHHHhHhhCceeEEEEecccc Confidence 9999976533221111110 01111 123345677889999999999999999999986432 Q ss_pred --------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEe-eccCCceEEEEEeccccceeeecCccceEE Q lcl|Aclame:pro 80 --------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRW-RNANGADMKWEYLRPSQVNTYYFEYENGMY 144 (392) Q Consensus 80 --------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~-r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~ 144 (392) ..++.+||++||+++||+.++.+++++||||++++ ++.+|++...++ T Consensus 64 ~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~lll~Gnayi~~i~~~~~g~~~~~~~------------------ 125 (378) T protein:vir:85 64 GSDTLISMAGSDLDEVLNWSYKGEHNSMEFWQKVIKKLLCTRYVDLYPIFDSETGELLDLLF------------------ 125 (378) T ss_pred ccccccccccchHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEeecCCCceEEEEEe------------------ Confidence 13456899999999999999999999999999864 444554443332 Q ss_pred EEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH Q lcl|Aclame:pro 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD 224 (392) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~ 224 (392) ..+ ...+.+++|||++.+.... .+.+.+..+...+ ...++ ++.++|+++.++..+++. T Consensus 126 ----~~~-----~~~~~~~dvih~~~~~~~~--~~~~~~~~a~~~~----------~~~~~-~~~~~g~l~~~~~l~~~~ 183 (378) T protein:vir:85 126 ----AND-----KKEYKPEELVRLVSPFYIN--EDTSILDNALASI----------QTKLE-QGKLRGLLKINAFLDIDN 183 (378) T ss_pred ----cCC-----CEEEcccceEEEecCcCcc--chhhHHHHHHHHH----------HHHHh-cCCcceEEEeCCcCCHHH Confidence 111 1346778999998543222 2345554444333 23344 457899999988765543 Q ss_pred --HHHHHHHH---HHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHH Q lcl|Aclame:pro 225 --KDKASRSR---SFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQI 299 (392) Q Consensus 225 --~~~~~~~~---~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~ 299 (392) +.++++.+ .+.+..++|++++|++|++|++++.+++++|+ +.+++++++||++|||||++|++ +++.++. T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~~~~~-~~~~~~~~~Ia~~fgVPp~~l~~----s~~e~~~ 258 (378) T protein:vir:85 184 TQEYREKALATIKNMQEGSSYNGLTPVDNKTEIVELKKDYSVLNK-DEIELIKSELLTGYFMNENILLG----TATQEQQ 258 (378) T ss_pred HHHHHHHHHHHHHHhhcccccccceecCCCceEEeccCChhhhhH-HHHHHHHHHHHHHhCCCHHHhcC----CchHHHH Confidence 22333333 34466788999999999999999999999996 77899999999999999999964 2345677 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh--------------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHh Q lcl|Aclame:pro 300 SGMYASALNRYLRPAISELEYKLSDH--------------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQE 365 (392) Q Consensus 300 ~~~~~~~l~p~l~~i~~~l~~~l~~~--------------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~ 365 (392) .+|+.+||.|++.+|+++|+.+|++. +.||...+++.|.+++++.+..++++|++|+||+|++++. T Consensus 259 ~~f~~~tL~P~~~~ie~~l~~kLl~~~er~~~~~~~~~~~~~f~~~~l~~~d~~~~~~~~~~~~~~G~~T~NE~R~~lgl 338 (378) T protein:vir:85 259 IYFYNSTIIPLLIQLEKELTYKLISTNRRRVVKGNLYYERIIVDNQLFKFATLKELIDLYHENINGPIFTQNQLLVKMGE 338 (378) T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCChhhhhhhhhccccceeeecchhhhhcCHHHHHHHHHHHHhCCCcCHHHHHHHhCC Confidence 89999999999999999999999642 5678888999999999999999999999999999999865 Q ss_pred CCCCccccccc-cCCCCCC------CCCCCCCCC Q lcl|Aclame:pro 366 AGYIPKDLPAP-ENTNKKT------TGQSNEPVP 392 (392) Q Consensus 366 ~g~~~~e~~~~-e~~~~~~------~gd~~~p~p 392 (392) .+++..|...+ -|..++. .++.+++.. T Consensus 339 ~p~~gGD~~~~~~N~~~~~~~~~~~~~~~~~~~~ 372 (378) T protein:vir:85 339 QPIEGGDIYIANLNAVAVKNLSDLQGSRKDVAST 372 (378) T ss_pred CCCCCCCeEeecccccccccchhhcCccCCCCCC Confidence 55543332211 1111111 111111111 No 88 >protein:vir:99452 Length: 651 # NCBI annotation: hypothetical protein # Family: family:all:1379 # ACLAME annotation(s): phi:0000161 - phage head/capsid # MgeID: mge:1595 # MgeName: BJ1 # Cross-refs: genbank:acc:YP_919077;genbank:gi:119757035;genbank:GeneID:4606105 Probab=100.00 E-value=4.9e-56 Score=323.83 Aligned_cols=383 Identities=14% Similarity=0.036 Sum_probs=259.7 Q ss_pred chhhH-hhccc----ccc-cccccccccccccchhhhhhhhcCCCC---cccchh---hhh-cchHHHHHHHHHHHhhhh Q lcl|Aclame:pro 3 LPILN-FINQT----NDP-PEVGSVQSYFPDGNDAQIMESLLGDNN---EWVSAR---AAL-RNSDLFSIILQLSSDLAI 69 (392) Q Consensus 3 Mg~~~-~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~---~a~-~~~~v~~~i~~ia~~ia~ 69 (392) |.=-. -.+.. ..+ .+..... .+.+..-+ ...+....+ -++++. ..+ .++++++||++++++||. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~p~~~~~~L~~~~e~~~~~~~~i~~~~~~iag 77 (651) T protein:vir:99 1 MTDTTGETQETKVHVEGLGGEADLAK--SPNSTQIP-DHRIQSHNVGVNPPYNPDRLAAFLELNETLATGIRKKSRYEVG 77 (651) T ss_pred CCCccceeeeeEEEeecccccccccc--cccccccc-hhhhcccCCCCCCCCCHHHHHHHHhcChHHHHHHHHHhhhhhc Confidence 21110 00000 000 0000000 00111100 111111111 122333 222 378999999999999999 Q ss_pred Cceeeecccc-------------------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEE Q lcl|Aclame:pro 70 VKINAEKKKN-------------------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKW 124 (392) Q Consensus 70 ~p~~~~~~~~-------------------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l 124 (392) +.|.+..+.. ......+|..+|..+|++.++.++..+||+|+.+.++..|.|+.+ T Consensus 78 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~~t~~~i~~~~~~Dle~tGna~ieiIrn~~g~pv~L 157 (651) T protein:vir:99 78 FGFDLVPAQGVDGDDASDAQREVARNFWRGRSSRWQTGPNQAKTPATPERVKELARQDYHGVGWLALEMLTDIEGRPVGL 157 (651) T ss_pred cCceeeecccCCCCccchHHHHHHHHHhhccchhhcccccccCCCCCHHHHHHHHHHHHHHHhhHhhhhhhcCccchhhh Confidence 9998753210 011245799999999999999999999999999999999999999 Q ss_pred EEeccccceeeecCcc--------------------------------ceEEEEE------------------------- Q lcl|Aclame:pro 125 EYLRPSQVNTYYFEYE--------------------------------NGMYYNI------------------------- 147 (392) Q Consensus 125 ~~l~~~~v~~~~~~~~--------------------------------~~~~~~~------------------------- 147 (392) +.+++..+++..+... ...+..+ T Consensus 158 ~~lp~~~~Rv~~~~~~~~~~~~~ll~~~pn~~~~~~~~~~~~q~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~d 237 (651) T protein:vir:99 158 AYVPARTVRVRRPQNRFDQPRHPEEGRYVDGDVADIASRGYVQIRNGNRRYFGEAGDRYRGQEVVIDESGDEPTIRYRED 237 (651) T ss_pred hhcChhheeeecccccccchhhhhhhcccccccchhHHHHHHHHHhcCcceEEEeeccccceeeeeccCCcceeEEeccC Confidence 9999987755322100 0000000 Q ss_pred ---------------EecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcce Q lcl|Aclame:pro 148 ---------------TFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPG 212 (392) Q Consensus 148 ---------------~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ 212 (392) .+.....+....+++++|||++++++.+..+|+||+..++.++..+.++++++.++|+||++|+| T Consensus 238 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~eViHir~~~~~~g~~G~spl~~a~~~i~~a~~a~~~~~~~f~NG~~p~g 317 (651) T protein:vir:99 238 EESEREPIFVDRETGDVTTGDANGLENRPANELIFIPNPSILEDDYGVPDWVSAIRTISADEAAKDYNRDFFDNDTIPRM 317 (651) T ss_pred cceeeeeecccceeeeEEEcCCCceeEecccceEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCce Confidence 00001122345688999999999887677889999999999999999999999999999999999 Q ss_pred EEEeCCCC-CchHH--HHHHHHHHHhccccCCceeeccC-----------CceEeecccCh-hhHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 213 VLTVKGGG-LLSDK--DKASRSRSFMKRSRSGGPVVLDD-----------LEEFTALEIKS-NVAQLLSQTDWTSKQYAK 277 (392) Q Consensus 213 il~~~~~~-~~~~~--~~~~~~~~~~~~~~~g~~~vl~~-----------g~~~~~l~~~~-~d~~~~e~~~~~~~~Ia~ 277 (392) +|++++.. ++++. .++.|.+ ...|+|++++|+. |++|++++.++ +|+||+|++++++++||+ T Consensus 318 il~~~~~~ls~e~~~~lr~~~~~---~~~nagk~~vL~~~~~~~~~~~~~g~~~~pls~~~~~D~qfle~r~~~~~eIa~ 394 (651) T protein:vir:99 318 VIKVTGGELSEESKRDLRQMLNG---LREESHRAVVLEVEKFQSQLDEDVEIELEPMGQGISEEMDFRQFREKNEHEIAK 394 (651) T ss_pred EEEecCCCCCHHHHHHHHHHHHH---HhccCCceEEeecccccccccccCCceEEEcCcCchhhHHHHHHHHHHHHHHHH Confidence 99997653 33322 2223332 3457889998865 99999999986 599999999999999999 Q ss_pred HhcccHHHcCCccccc-ch-HHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------hhcccchhhhhcchHHHHHHH Q lcl|Aclame:pro 278 VYGLPDSYIGGQGDQQ-SS-IQQISGMYASALNRYLRPAISELEYKLSD----------HISVNMRPAIDPLGDNYLSTI 345 (392) Q Consensus 278 ~fgVP~~~lg~~~~~~-~~-~~~~~~~~~~~l~p~l~~i~~~l~~~l~~----------~~~~d~~~~~~~~~~~~~~~~ 345 (392) +|||||++||..++++ ++ +++.+.|+++||.|+++.|+++|+.+|++ +++|+...+++.|.+.+++.+ T Consensus 395 afgVPp~~lG~~~~~~~sn~E~~~~~f~~~tL~P~~~~ie~eln~kLl~~~e~~~~~~i~~ef~~~~llr~D~~~~~e~~ 474 (651) T protein:vir:99 395 VLEVPPVKIGVTDSANRSNSDQQDKDFALEVIQPEQHTFAEWLYQIIHQQALGVTDWTIEYELRGADQPKQEAQLAEQRV 474 (651) T ss_pred HhCCCHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCceEEEEeccchhhhccHHHHHHHH Confidence 9999999999765533 44 56788999999999999999999999875 245677778899999999999 Q ss_pred HHHHhCCCcCHHHHHHHHHhCCCCc--cccccccCC------CCCCCCCCC--CCCC Q lcl|Aclame:pro 346 STATRWGALAENQATFVLQEAGYIP--KDLPAPENT------NKKTTGQSN--EPVP 392 (392) Q Consensus 346 ~~~~~~g~~T~nE~R~~l~~~g~~~--~e~~~~e~~------~~~~~gd~~--~p~p 392 (392) ..++++|++|+||+|++++..+++. .+. .+.+. .+..+|+.+ +..| T Consensus 475 ~~~i~~G~~T~NE~R~~lglppi~~~~gd~-~l~~~~~~~~g~~~~gge~~~~~~~~ 530 (651) T protein:vir:99 475 RAMRLAGVGLVDEAREELGLDPLGEPYGEM-TLSEFEAEVAGDVAGGGETEAVHEPP 530 (651) T ss_pred HHHHhCCCcCHHHHHHHhCCCCCCCccccc-cccccccccccccccCCCCcccccCc Confidence 9999999999999999884433321 111 11111 122333321 1222 No 89 >protein:vir:78641 Length: 278 # NCBI annotation: portal protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:1855 # MgeName: tp310-2 # Cross-refs: genbank:acc:YP_001429941;genbank:gi:156603995;genbank:GeneID:5525387 Probab=100.00 E-value=2.4e-54 Score=314.56 Aligned_cols=259 Identities=15% Similarity=0.185 Sum_probs=219.1 Q ss_pred hhhCceeeecccc-------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCc Q lcl|Aclame:pro 67 LAIVKINAEKKKN-------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEY 139 (392) Q Consensus 67 ia~~p~~~~~~~~-------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~ 139 (392) ||+||++++++.. ..++.+||++||+++||+.++.+++++||||++++|+.+|++++|||++|+.|++..+.+ T Consensus 1 ia~l~~~~~~~~~~~~~~l~~lL~~~PN~~~t~~~f~~~~~~~ll~~Gna~~~i~r~~~G~~~~l~~l~~~~v~v~~~~~ 80 (278) T protein:vir:78 1 MASLPLKMYEDYKVVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERDIYHQPSKLFLLNPDVVEMLIENQ 80 (278) T ss_pred CccceeEEEecCcccccHHHHHHHhcCCCCCCHHHHHHHHHHHHhhcCCEEEEEEECCCCcEEEEEEECCceeEEEEcCC Confidence 9999999987653 235679999999999999999999999999999999999999999999999999999998 Q ss_pred cceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC Q lcl|Aclame:pro 140 ENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG 219 (392) Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~ 219 (392) ++.+++.+... .+..+.+++++|||++++++.+..+|+|++.++..++..+.++++++...+.+ .|+++++.++. T Consensus 81 ~~~~~y~~~~~---~g~~~~~~~~evih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~i~~~~~~ 155 (278) T protein:vir:78 81 SRELYYSIHAA---TGNKLIVHNMDMLHFKHIVASNMVQGISPIDVLKNTTDFDNAVRTFNLTEMQK--PDSFMLKYGSN 155 (278) T ss_pred CceEEEEEEcC---CceEEEEccccEEEECCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHhcC--CCcEEEEeCCC Confidence 88887776544 34567899999999999877778899999999999999999999886555444 57899998887 Q ss_pred CCchHHH--HHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc-cch- Q lcl|Aclame:pro 220 GLLSDKD--KASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ-QSS- 295 (392) Q Consensus 220 ~~~~~~~--~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~-~~~- 295 (392) .++++.. ++.+.+ ...++|+++++++|++|++++++++|+||+|++++++++||++|||||.++|+.+++ +++ T Consensus 156 l~~e~~~~~~~~~~~---~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVpp~~lg~~~~~~~sn~ 232 (278) T protein:vir:78 156 VGKEKRQQVLEDFKQ---YYEENGGILFQEPGVEIEPLPKKYVSEDIVASENLTRERVANVFQLPSVFLNARSNTNFAKN 232 (278) T ss_pred CCHHHHHHHHHHHHH---HhccCCCceecCCCceEEEccCChhHHHHHHHHHHHHHHHHHHhCCCHHHhCCCCCCCcccH Confidence 6655432 223332 334678999999999999999999999999999999999999999999999976543 344 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--------hcccchhh Q lcl|Aclame:pro 296 IQQISGMYASALNRYLRPAISELEYKLSDH--------ISVNMRPA 333 (392) Q Consensus 296 ~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~--------~~~d~~~~ 333 (392) .++.+.|++.||.|+++.|+++|+.+|++. ++||.+.+ T Consensus 233 ~~~~~~~~~~~l~P~~~~i~~~ln~~L~~~~e~~~g~~~~f~~~~l 278 (278) T protein:vir:78 233 EELNRFYLQHTLLPIVKQYEEEFNRKLLTKTDREKIGILNLTLNLI 278 (278) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHhcCCceEEEecccC Confidence 467889999999999999999999999742 45565544 No 90 >protein:vir:79150 Length: 368 # NCBI annotation: bacteriophage gpQ # Family: family:all:196 # MgeID: mge:1863 # MgeName: RSA1 # Cross-refs: genbank:acc:YP_001165254;genbank:gi:145708079;genbank:GeneID:5247161 Probab=100.00 E-value=9e-51 Score=294.94 Aligned_cols=337 Identities=8% Similarity=-0.022 Sum_probs=225.5 Q ss_pred chhhH--hhccccccccccccccccc--ccchhhhhhhhcCCCCcccc-hh------------hhhcchHHHHHHHHHHH Q lcl|Aclame:pro 3 LPILN--FINQTNDPPEVGSVQSYFP--DGNDAQIMESLLGDNNEWVS-AR------------AALRNSDLFSIILQLSS 65 (392) Q Consensus 3 Mg~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~-~~------------~a~~~~~v~~~i~~ia~ 65 (392) |+=-+ ..++.......+......+ ......-...|+-+....+. .. .....|.-+.|+..+.+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~la~~~~ 80 (368) T protein:vir:79 1 MSRNKTRRAARAASAHVRTANTDAPTEHHTDRAAQAEVFSFGDPVEVLDRRELLDYVECMRMGQWYEPPMPWDGLARSFR 80 (368) T ss_pred CCccccccchhccCcccccccccCcchhhccccCceEEEEcCCceeecchhhHHHHHHHHhccchhccCcCHHHHHHHHh Confidence 33221 1111111111110000000 00000000011000111111 00 01122333445444433 Q ss_pred hhhhCce-eeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEE Q lcl|Aclame:pro 66 DLAIVKI-NAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMY 144 (392) Q Consensus 66 ~ia~~p~-~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~ 144 (392) +-+.-.- ...++....++.+||++||+++|++ ++.+++++||+|++++|+..|++++|+|++|..|++..+. +.++ T Consensus 81 ~~~~h~~~~~~~~n~l~l~~~Pn~~~t~~~f~~-l~~d~ll~Gnay~~~~r~~~G~~~~L~~l~~~~v~~~~~~--~~~~ 157 (368) T protein:vir:79 81 AAAHHSSAVYVKRNILVSTFIPHPLLSRATFER-LVLDWQVFGNAYLERRENVLGGTIRLDTPLAKYVRRGLDL--NTYF 157 (368) T ss_pred hccccchhhhhhcchhhhhcCCCcCCCHHHHHH-HHHHHhhcCCeEEEEEEcCCCCEEEEEEeCcccceeeccC--CEEE Confidence 3321111 1123333455679999999999975 6789999999999999999999999999999999876543 3332 Q ss_pred EEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCC-CCCch Q lcl|Aclame:pro 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKG-GGLLS 223 (392) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~-~~~~~ 223 (392) +. . ..+..+.+++++|||++.+++.+..+|+||+..+..++.++.++..+..++|+||++|+|||.+++ ..+++ T Consensus 158 ~~-~----~~~~~~~~~~~dIihir~~~~~~~~yGlsp~~~a~~si~l~~aa~~~~~~~~~NGa~~~gil~~~~~~l~~e 232 (368) T protein:vir:79 158 FV-Q----NWQQPYTFAAGSVFHLQEPDINQEVYGLPEYLSALNATWLNESATLFRRRYYKNGSHAGFILYMTDAAQKQE 232 (368) T ss_pred EE-e----cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCHH Confidence 22 1 134567899999999999888888899999999999999999999999999999999999999875 34444 Q ss_pred H--HHHHHHHHHHhccccCCceeec-----cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc--- Q lcl|Aclame:pro 224 D--KDKASRSRSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--- 293 (392) Q Consensus 224 ~--~~~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~--- 293 (392) + +.++++ +.+.|..|+|+++|+ ++|++|++++.+++|+||+|++++++++||++|||||.++|+.++++ T Consensus 233 ~~~~lk~~~-~~~~G~~N~g~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi~~~~t~~~ 311 (368) T protein:vir:79 233 DVDTLREAM-KSAKGPGNFRNLFMYAPNGKKDGIQLLPVSEVAAKDEFWNIKNVTRDDQLAAHRVPPQLMGIIPNNTGGF 311 (368) T ss_pred HHHHHHHHH-HHhcCCcccCceeEecCCCCccceeEEEcCCCHHHHHHHHHHHHhHHHHHHHhCCCHHHccccCCCCCcc Confidence 3 223344 457889999999998 68999999999999999999999999999999999999999754433 Q ss_pred c-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhcchHHHHHHHHHHHhCC Q lcl|Aclame:pro 294 S-SIQQISGMYASALNRYLRPAISELEYKLSD-HISVNMRPAIDPLGDNYLSTISTATRWG 352 (392) Q Consensus 294 ~-~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~g 352 (392) + .+++.+.|++++|.|+++.|+ +++.+|.. .++|+...+++.|.+.++... .++. T Consensus 312 sn~e~~~~~f~~~~l~Pl~~~ie-~ln~~l~~e~~rF~~~~l~~~D~~a~a~~~---~rsa 368 (368) T protein:vir:79 312 GDVEKAAMVFARNEVKPLQDRLL-AINDWIGDEVVRFAPYALGGHDQPAAAPGG---QRSA 368 (368) T ss_pred ccHHHHHHHHHHHHHHHHHHHHH-HHHhccCcceeeechhHhhcccccccCCcc---cccC Confidence 3 346788999999999999997 68878764 457777776766655444311 1111 No 91 >protein:vir:79207 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1866 # MgeName: phiE202 # Cross-refs: genbank:acc:YP_001111036;genbank:gi:134288763;genbank:GeneID:4960726 Probab=100.00 E-value=2.6e-50 Score=292.44 Aligned_cols=312 Identities=11% Similarity=0.062 Sum_probs=220.3 Q ss_pred chhhHhhccccccc--c-------ccccc--ccccccchhhhhhh--hc-----CCCCcc----cchh----hhhcchHH Q lcl|Aclame:pro 3 LPILNFINQTNDPP--E-------VGSVQ--SYFPDGNDAQIMES--LL-----GDNNEW----VSAR----AALRNSDL 56 (392) Q Consensus 3 Mg~~~~~~~~~~~~--~-------~~~~~--~~~~~~~~~~~~~~--~~-----~~~~~~----v~~~----~a~~~~~v 56 (392) |+ .-+++.... . ..+.. ..+..+...+++.. +. ..+|.. |+.. ..-.++.. T Consensus 1 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~~~~~h 77 (351) T protein:vir:79 1 MS---KRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHH 77 (351) T ss_pred CC---CCCCCCCCCCCCCCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhHhh Confidence 22 111111000 0 00000 00111111111100 00 011221 2221 11123333 Q ss_pred HHHHHHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeee Q lcl|Aclame:pro 57 FSIILQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYY 136 (392) Q Consensus 57 ~~~i~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~ 136 (392) .+||...++.+++ ..+||++||.++|++ ++.+++++||+|++++|+..|++++|+|++|..|++.. T Consensus 78 ~~~l~~k~n~l~~-------------~~~Pnp~~t~~~f~~-~v~d~ll~Gnay~~~~r~~~G~~~~L~~l~~~~v~~~~ 143 (351) T protein:vir:79 78 SSALFFKANVLAS-------------TFRPHRWLSRHAFER-WALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKA 143 (351) T ss_pred hhhhhhhhhHHhh-------------cccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEeCCcceeeee Confidence 4444444333332 457999999999964 66899999999999999999999999999999999877 Q ss_pred cCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEe Q lcl|Aclame:pro 137 FEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTV 216 (392) Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~ 216 (392) +.++ ++. .. ..+..+.+++++|||++.+++.+..+|+|++..+..++.++.++..+..++|+||++|+||+++ T Consensus 144 ~~~~---~~~-~~---~~g~~~~~~~~eIihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~il~~ 216 (351) T protein:vir:79 144 DFSG---FVY-VN---GWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYM 216 (351) T ss_pred cCCe---EEE-Ee---cCceEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEe Confidence 6543 221 11 2345678999999999999988889999999999999999999999999999999999999998 Q ss_pred CCC-CCchH--HHHHHHHHHHhccccCCceeec-----cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCC Q lcl|Aclame:pro 217 KGG-GLLSD--KDKASRSRSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGG 288 (392) Q Consensus 217 ~~~-~~~~~--~~~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~ 288 (392) ++. .++++ +.++++ +...|..|.++++++ ++|++|++++.+++|+||+|++++++++||++|||||.++|+ T Consensus 217 ~~~~ls~e~~~~lk~~~-~~~~G~~N~~~~~v~~~~g~~~gi~~~pl~~~~~d~ef~e~k~~s~~eI~~a~~VPp~llGi 295 (351) T protein:vir:79 217 TDAAQKQDDVDNMRDAL-KNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGI 295 (351) T ss_pred cCCCCCHHHHHHHHHHH-HHhcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcc Confidence 753 34433 223344 457888999999988 589999999999999999999999999999999999999997 Q ss_pred ccccc----chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hcccchhhhhcchHH Q lcl|Aclame:pro 289 QGDQQ----SSIQQISGMYASALNRYLRPAISELEYKLSDH-ISVNMRPAIDPLGDN 340 (392) Q Consensus 289 ~~~~~----~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~-~~~d~~~~~~~~~~~ 340 (392) ..+++ +.+++.+.|++++|.|+++.|++ ++.+|+.+ ++|+...+++.|.+. T Consensus 296 ~~~~t~~~~n~e~~~~~f~~~~l~Pl~~~ie~-ln~~lg~~~~~F~~~~llr~d~~a 351 (351) T protein:vir:79 296 VPSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWLGDEVVTFDDYEIPPAPVAA 351 (351) T ss_pred cCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhcCcceeeeChhhhccccccC Confidence 54432 33567889999999999999975 77787655 578777777766654 No 92 >protein:vir:103971 Length: 376 # NCBI annotation: pbsx family phage portal protein # Family: family:all:196 # MgeID: mge:1665 # MgeName: phi52237 # Cross-refs: genbank:acc:YP_293752;genbank:gi:72537722;genbank:GeneID:3608098 Probab=100.00 E-value=3.1e-50 Score=292.01 Aligned_cols=317 Identities=11% Similarity=0.049 Sum_probs=225.3 Q ss_pred CcchhhHhhcccccc--cc----ccccc--ccccccchhhhhh--hhcC-----CCCc----ccchh----hhhcchHHH Q lcl|Aclame:pro 1 MILPILNFINQTNDP--PE----VGSVQ--SYFPDGNDAQIME--SLLG-----DNNE----WVSAR----AALRNSDLF 57 (392) Q Consensus 1 m~Mg~~~~~~~~~~~--~~----~~~~~--~~~~~~~~~~~~~--~~~~-----~~~~----~v~~~----~a~~~~~v~ 57 (392) .+|+--+...+...+ +. ..+.. .-+..+...+++. ++.. .+|. +|+.. ..-.++... T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fg~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~La~~~~~~~~h~ 103 (376) T protein:vir:10 24 LRMSKRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHS 103 (376) T ss_pred ccchhccCCCcccchhhhhHhhhccCcceeEEEEcCCceeccCcchhhhhhhhhhcCceecCCCCHHHHHHHHhhhHHhh Confidence 444432221111100 00 00000 0011111111111 0000 1111 22221 111234445 Q ss_pred HHHHHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeec Q lcl|Aclame:pro 58 SIILQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYF 137 (392) Q Consensus 58 ~~i~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~ 137 (392) +||...++.+++ ..+||++||+++|++ ++.+++++||+|++++|+.+|++++|+|++|..|++..+ T Consensus 104 s~l~~k~n~l~~-------------~~~Pnp~lT~~~f~~-~v~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~d 169 (376) T protein:vir:10 104 SALFFKANVLAS-------------TFRPHRWLSRHAFER-WALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKAD 169 (376) T ss_pred hhHHHHhHHHHh-------------ccCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEeCCcceEEEee Confidence 566555555433 357999999999975 567899999999999999999999999999999998876 Q ss_pred CccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeC Q lcl|Aclame:pro 138 EYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVK 217 (392) Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~ 217 (392) .++ +++ .. .++..+.+++++|||++.+++.+..+|+|++.++..++.++.++.+|..++|+||++|+|||.++ T Consensus 170 ~~~--~~~--~~---~~~~~~~~~~~eViHir~~~~~~~~yGls~~~~a~~si~l~~aa~~f~~~~f~NGa~pggIl~~~ 242 (376) T protein:vir:10 170 FNG--FVY--VN---GWQERHEFEPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMT 242 (376) T ss_pred CCe--EEE--EE---cCCeEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEec Confidence 542 222 11 13456789999999999998888889999999999999999999999999999999999999987 Q ss_pred C-CCCchH--HHHHHHHHHHhccccCCceeec-----cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCc Q lcl|Aclame:pro 218 G-GGLLSD--KDKASRSRSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQ 289 (392) Q Consensus 218 ~-~~~~~~--~~~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~ 289 (392) + ..++++ +.++.+ +...|..|.++++++ ++|++|++++.+++|+||+|++++++++||++|||||.++|+. T Consensus 243 d~~l~~e~~~~lr~~~-~~~~G~~N~~~~~vl~~~g~~~Gi~~~pls~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi~ 321 (376) T protein:vir:10 243 DAAQKQDDVDNMRDAL-KNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIV 321 (376) T ss_pred CCCCCHHHHHHHHHHH-HHhcCccccCceeEecCCCCccceEEEEccCCHHHHHHHHHHHHhHHHHHHHhCCCHHHhccc Confidence 5 344443 223444 457889999999998 5799999999999999999999999999999999999999975 Q ss_pred cccc---ch-HHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhcchHH Q lcl|Aclame:pro 290 GDQQ---SS-IQQISGMYASALNRYLRPAISELEYKLSD-HISVNMRPAIDPLGDN 340 (392) Q Consensus 290 ~~~~---~~-~~~~~~~~~~~l~p~l~~i~~~l~~~l~~-~~~~d~~~~~~~~~~~ 340 (392) .+++ ++ +++.+.|++++|.|+++.|++ ++.+|.. .++|+...+++.|.+. T Consensus 322 ~~~t~~~sn~eq~~~~f~~~~L~Pl~~~iee-ln~~L~~~~~~F~~~~Llr~d~ka 376 (376) T protein:vir:10 322 PSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWLGEEVVRFDDYEIPPAPVAA 376 (376) T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhccccccccChhHhhcccccC Confidence 4432 33 467789999999999999984 7777764 4788887777777665 No 93 >protein:vir:100328 Length: 346 # NCBI annotation: capsid portal protein Q # Family: family:all:196 # MgeID: mge:1484 # MgeName: phi-MhaA1-PHL101 # Cross-refs: genbank:acc:YP_655469;genbank:gi:109289937;genbank:GeneID:4157371 Probab=100.00 E-value=2e-50 Score=293.10 Aligned_cols=319 Identities=9% Similarity=0.042 Sum_probs=220.8 Q ss_pred chhhHhhccccccccccc----ccccccccchhhhhh--hh------cCCCCcccchhhhhcchHHHHHHHHHHHhhh-- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGS----VQSYFPDGNDAQIME--SL------LGDNNEWVSARAALRNSDLFSIILQLSSDLA-- 68 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~------~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia-- 68 (392) |+=. +++..+...+. ...-+..+...++.. ++ ....|..+. -|.-+..+..+.++.+ T Consensus 1 m~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~------pp~~~~~la~l~~~~~~h 71 (346) T protein:vir:10 1 MKKQ---LRKNLTQNDRLQPQAQTEIFSFGDPIPVLDRADILNYLECSAMYEKWYN------PPMSFDGLAKSLRSSTHH 71 (346) T ss_pred CCcc---cCCCCCcccccccccCeEEEecCCcceecCchhHHHHHHHhhcCCceEe------cCCCHHHHHHHHHhhhhc Confidence 3222 11111111110 000111111111110 00 001111111 0111222222222222 Q ss_pred hCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEE Q lcl|Aclame:pro 69 IVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNIT 148 (392) Q Consensus 69 ~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~ 148 (392) +-.+.+.++....++.+||++||+++|++ ++.+++++||+|++++|+..|++++|+|++|..|++..+.++ .++... T Consensus 72 ~~~i~~k~n~l~~l~~~Pn~~~t~~~f~~-~~~d~ll~Gnay~~i~r~~~G~~~~L~pl~~~~v~~~~~~~~--~~~~~~ 148 (346) T protein:vir:10 72 ESAIITKANILLSTCEVDSRYLSRRDLSS-FVKDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQ--FYYVPQ 148 (346) T ss_pred chhhhhhhhhHHHHHhCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCcEEEEEEecCCceEEEEcCCe--EEEEEE Confidence 22223333333445678999999999987 567899999999999999999999999999999998766543 222222 Q ss_pred ecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC-CCchH--H Q lcl|Aclame:pro 149 FDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG-GLLSD--K 225 (392) Q Consensus 149 ~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~-~~~~~--~ 225 (392) . .++..+.+++++|||++.+++.+..+|+|++..+..++.++.+++++..++|+||++|++|+++++. .++++ + T Consensus 149 ~---~~g~~~~~~~~dIih~r~~~~~~~~~G~~~~~~a~~si~l~~~a~~~~~~~~~NG~~~~~il~~~d~~l~~e~~~~ 225 (346) T protein:vir:10 149 R---FDHQEHEFAKGSIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQKQEDVEN 225 (346) T ss_pred c---cCCeEEEEecccEEEecCCCCCCCeeeccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCCCCCHHHHHH Confidence 2 2345688999999999999888888999999999999999999999999999999999999998653 34333 2 Q ss_pred HHHHHHHHHhccccCCceeecc-----CCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---ch-H Q lcl|Aclame:pro 226 DKASRSRSFMKRSRSGGPVVLD-----DLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---SS-I 296 (392) Q Consensus 226 ~~~~~~~~~~~~~~~g~~~vl~-----~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---~~-~ 296 (392) .++++ +...|..|+++++++. +|+++++++.+++|+||+|.+++++++||++|||||.++|+..+++ ++ + T Consensus 226 i~~~~-~~~~g~~n~~~~~vl~~~~~~~gi~~~pis~~~~d~qf~e~k~~~~~~I~~af~VPp~llG~~~~~~~~~s~~e 304 (346) T protein:vir:10 226 IRQQL-KQSKGVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSRDDVLAAHRVPPQLMGIIPNNTGGFGNVA 304 (346) T ss_pred HHHHH-HHhcCccccCceeEecCCCCccceeEEecCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcccHH Confidence 23344 4457888999999985 4789999999999999999999999999999999999999754432 33 4 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hcccchhhhhcch Q lcl|Aclame:pro 297 QQISGMYASALNRYLRPAISELEYKLSDH-ISVNMRPAIDPLG 338 (392) Q Consensus 297 ~~~~~~~~~~l~p~l~~i~~~l~~~l~~~-~~~d~~~~~~~~~ 338 (392) ++.+.|++++|.|+++.|++ ++.+|+.. ++|+...+++.+. T Consensus 305 ~~~~~f~~~~l~P~~~~iee-~n~~L~~e~i~F~~~~ll~~~~ 346 (346) T protein:vir:10 305 DAAEVFFITEIEPLQERLKE-FNQWLGQEVIKFKPSKLLQRTQ 346 (346) T ss_pred HHHHHHHHHHHHHHHHHHHH-HHhhcccceeeechhhhcccCC Confidence 57799999999999999985 66677644 6888888887765 No 94 >protein:vir:98567 Length: 340 # NCBI annotation: gp1 # Family: family:all:196 # MgeID: mge:1533 # MgeName: PSP3 # Cross-refs: genbank:acc:NP_958056;genbank:gi:41057353;genbank:GeneID:2744238 Probab=100.00 E-value=6.1e-50 Score=290.39 Aligned_cols=310 Identities=11% Similarity=0.061 Sum_probs=217.8 Q ss_pred chhhHhhccccccccccccc--ccccccchhhhhh--hhcC-----CCCc----ccchhhh----hcchHHHHHHHHHHH Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQ--SYFPDGNDAQIME--SLLG-----DNNE----WVSARAA----LRNSDLFSIILQLSS 65 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~-----~~~~----~v~~~~a----~~~~~v~~~i~~ia~ 65 (392) |+ .+. +++.......... ..++.+...++.. ++.. .++. +|+...- -.++...+||...++ T Consensus 1 m~-~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~pp~~~~~la~l~~a~~~h~s~i~~k~n 78 (340) T protein:vir:98 1 MS-KRK-PRKAVAMTASAPQKMEAFTFGEPVPVLDKRDILDYVECISNGKWYEPPVSFSGLAKSLRSAVHHSSPIYVKRN 78 (340) T ss_pred CC-CCC-CCccccccccCccceeEEEcCCceeecCcchhhhhhhhhhcCceecCCCCHHHHHHHHHhccccchhhhhhhh Confidence 44 111 1111111000000 0111111111110 0000 0111 1111110 012222334444333 Q ss_pred hhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEE Q lcl|Aclame:pro 66 DLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYY 145 (392) Q Consensus 66 ~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~ 145 (392) .+++ ..+||++||.++|+ .++.+++++||+|++++|+..|++++|+|+++..|++..+. + .++ T Consensus 79 ~l~~-------------~~~Pn~~lt~~~f~-~~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~~~--~-~~~ 141 (340) T protein:vir:98 79 VLAS-------------TYIPHPLLSRQDFS-RFALDYLVFGNAFLEQRHSVTGQLIKLLTSPAKYTRRGVDD--S-VFW 141 (340) T ss_pred HHhh-------------ccCCCCCCCHHHHH-HHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceEEEcccC--c-EEE Confidence 3332 35899999999996 56679999999999999999999999999999999886543 2 333 Q ss_pred EEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC-CCchH Q lcl|Aclame:pro 146 NITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG-GLLSD 224 (392) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~-~~~~~ 224 (392) .+.. .+..+.+++++|||++.+++.+..+|+|++..+..++.++.++.+++.++|+||++|+|||.+++. .++++ T Consensus 142 ~~~~----~~~~~~~~~~eViHir~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~pg~il~~~~~~ls~e~ 217 (340) T protein:vir:98 142 FVEN----FTQPHEFAPDTVFHLLEPDINQEIYGLPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDPAQSATD 217 (340) T ss_pred EEec----CCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHH Confidence 3332 345678999999999998887788999999999999999999999999999999999999998753 44433 Q ss_pred --HHHHHHHHHHhccccCCceeec-----cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---- Q lcl|Aclame:pro 225 --KDKASRSRSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---- 293 (392) Q Consensus 225 --~~~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---- 293 (392) +.++++ +...|..|.++++|+ ++|++|++++.+++|+||+|++++++++||++|||||.++|+.++++ T Consensus 218 ~~~lk~~~-~~~~G~~n~~~~~vl~~~g~~~g~~~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~~t~~~s 296 (340) T protein:vir:98 218 VESLRDAM-RNSKGLGNFKNLFFYSPNGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMGGKPENIGSLG 296 (340) T ss_pred HHHHHHHH-HHhcCccccCceeEecCCCCccceEEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcccCCCCCccc Confidence 233444 446788999999998 57999999999999999999999999999999999999999754432 Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hcccchhhhhcc Q lcl|Aclame:pro 294 SSIQQISGMYASALNRYLRPAISELEYKLSDH-ISVNMRPAIDPL 337 (392) Q Consensus 294 ~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~-~~~d~~~~~~~~ 337 (392) +.+++.+.|++++|.|+++.|++ ++.+|+.+ ++|+...+++.| T Consensus 297 n~e~~~~~f~~~~l~Pl~~~iee-~n~~L~~e~~rF~~~~l~~~d 340 (340) T protein:vir:98 297 DVEKVAKVFVRNELSPLQDRFRE-VNDWLGMEVIRFKEYTLDNPE 340 (340) T ss_pred cHHHHHHHHHHHHHHHHHHHHHH-HHhcccccccccCccccccCC Confidence 33567899999999999999985 78888755 688877777777 No 95 >protein:vir:78191 Length: 351 # NCBI annotation: gp5, phage portal protein, pbsx family # Family: family:all:196 # MgeID: mge:1848 # MgeName: phiE12-2 # Cross-refs: genbank:acc:YP_001111155;genbank:gi:134288732;genbank:GeneID:4960651 Probab=100.00 E-value=1.2e-49 Score=288.72 Aligned_cols=312 Identities=12% Similarity=0.065 Sum_probs=220.0 Q ss_pred chhhHhhccccccc--c-------ccccc--ccccccchhhhhh--hhc-----CCCCcc----cchhh----hhcchHH Q lcl|Aclame:pro 3 LPILNFINQTNDPP--E-------VGSVQ--SYFPDGNDAQIME--SLL-----GDNNEW----VSARA----ALRNSDL 56 (392) Q Consensus 3 Mg~~~~~~~~~~~~--~-------~~~~~--~~~~~~~~~~~~~--~~~-----~~~~~~----v~~~~----a~~~~~v 56 (392) |+ .-+++.... . ..+.. ..+..+...+++. ++. ..+|.. |+... .-.++.. T Consensus 1 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~pp~~~~~la~~~~~~~~h 77 (351) T protein:vir:78 1 MS---KRRSRAPRTFAAAPNPSAGSAAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHH 77 (351) T ss_pred CC---CCCCCCCCCCCCCCchhhhhcccceeEEEEcCCceeecCcchhhhhhhhhccCceecCCCCHHHHHHHHhhhHhh Confidence 22 111111000 0 00000 0011111111110 000 011221 22211 1123333 Q ss_pred HHHHHHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeee Q lcl|Aclame:pro 57 FSIILQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYY 136 (392) Q Consensus 57 ~~~i~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~ 136 (392) .+||..-++.+++ ..+||++||.++|++ ++.+++++||+|++++|+..|++++|+|+++..|++.. T Consensus 78 ~~~l~~k~n~l~~-------------~~~Pn~~~t~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~v~~~~ 143 (351) T protein:vir:78 78 SSALFFKANVLAS-------------TFRPHRWLSRHAFER-WALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKA 143 (351) T ss_pred hhhhhhhhhHHhh-------------cccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEecCcceEEee Confidence 4444444443332 357999999999965 55789999999999999999999999999999999877 Q ss_pred cCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEe Q lcl|Aclame:pro 137 FEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTV 216 (392) Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~ 216 (392) +.++ +++ .. ..+..+.+++++|||++.+++.+..+|+|++..+..++.++.++..+..++|+||++|+|||.+ T Consensus 144 ~~~~--~~~--~~---~~~~~~~~~~~eVihir~~~~~~~~yGl~~~~~a~~si~l~~~a~~~~~~~f~NGa~pggIl~~ 216 (351) T protein:vir:78 144 DFSG--FVY--VN---GWQERHEFAPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYM 216 (351) T ss_pred eCCe--EEE--Ee---cCCeEEEEccccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEe Confidence 6543 222 22 1345678999999999999888889999999999999999999999999999999999999998 Q ss_pred CC-CCCchH--HHHHHHHHHHhccccCCceeec-----cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCC Q lcl|Aclame:pro 217 KG-GGLLSD--KDKASRSRSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGG 288 (392) Q Consensus 217 ~~-~~~~~~--~~~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~ 288 (392) ++ ..++++ +.++++ +...|..|+++++++ ++|++|++++.+++|+||+|++++++++||++|||||.++|+ T Consensus 217 ~~~~ls~e~~~~lr~~~-~~~~G~~N~~~~~v~~~~g~~~g~k~~pls~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi 295 (351) T protein:vir:78 217 TDAAQKQDDVDNMRDAL-KNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGI 295 (351) T ss_pred cCCCCCHHHHHHHHHHH-HHhcCcccccceeeecCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcc Confidence 75 344443 223344 457889999999998 579999999999999999999999999999999999999997 Q ss_pred ccccc----chHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhcccchhhhhcchHH Q lcl|Aclame:pro 289 QGDQQ----SSIQQISGMYASALNRYLRPAISELEYKLSD-HISVNMRPAIDPLGDN 340 (392) Q Consensus 289 ~~~~~----~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~-~~~~d~~~~~~~~~~~ 340 (392) ..+++ +.+++.+.|++++|.|+++.|++ ++.+|.. .++|+...+++.|.+. T Consensus 296 ~~~~t~~~sn~e~~~~~f~~~~l~P~~~~iee-~n~~l~~~~~~F~~~~Llr~d~ka 351 (351) T protein:vir:78 296 VPSNSGGFGTPDTAARVFGRNEIRPLQARFAE-LNDWLGDEVVRFDDYEIPPAPVAA 351 (351) T ss_pred cCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhhcCccceecChhhhccccccC Confidence 54432 33467889999999999999985 6666654 4788888777777665 No 96 >protein:vir:4698 Length: 251 # NCBI annotation: hypothetical protein # Family: family:all:31 # ACLAME annotation(s): phi:0000068 - phage portal protein # MgeID: mge:102 # MgeName: phiPV83 # Cross-refs: genbank:acc:NP_061630;genbank:gi:9635717;genbank:GeneID:1262980 Probab=100.00 E-value=1.6e-50 Score=293.60 Aligned_cols=240 Identities=18% Similarity=0.197 Sum_probs=195.8 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc--- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN--- 79 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--- 79 (392) ||||+.+.++........ .......+..+++..+..|+.+.|+++|+|++||++||++||+||++++++.. T Consensus 1 MglF~~~~~r~~~~~~~~------~~~~~~~~~~~~~~~~~~v~~~~al~~~~v~~~i~~ia~~iA~lp~~~~~~~~~~~ 74 (251) T protein:vir:46 1 MGIFYKNEKRDLQYNEDD------LQMMVQTLPSFQGTKLRQYKDIEAIRHSDIFTAVMMIASDLARMPIRVTVNGQINY 74 (251) T ss_pred CCccccccccccCCCccc------hhhhhhhhccccCcCcceechhhhhccHHHHHHHHHHHHhHhhCceEEeeCccccc Confidence 999965544332211111 11111223344555677899999999999999999999999999999997532 Q ss_pred -----ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcce Q lcl|Aclame:pro 80 -----QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKI 154 (392) Q Consensus 80 -----~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~ 154 (392) ..++.+||++||+++||+.++.+++++||+|++++|+.+|++++|+|++|+.|++..+.++...++++....... T Consensus 75 ~~~~~~ll~~~Pn~~~t~~~f~~~l~~~lll~Gnay~~i~r~~~G~~~~L~~i~~~~v~v~~~~~g~~~~~~~~~~~~~~ 154 (251) T protein:vir:46 75 SDRIVNLLNTRPNPMYNGYIFKLVVFVSALLTSHGYIEITRDKTGEPMNLTFRKTSEIELKSDARGRLYYFHQRIDSNGN 154 (251) T ss_pred cchHHHHHhccCCCCCCHHHHHHHHHHHHhhcCCeEEEEEECCCCcEEEEEEECCceEEEEECCCCcEEEEEEEeccCCc Confidence 245689999999999999999999999999999999999999999999999999999888777766666665566 Q ss_pred eeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH---HHHHHHH Q lcl|Aclame:pro 155 EPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD---KDKASRS 231 (392) Q Consensus 155 ~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~---~~~~~~~ 231 (392) +....+++++|||+++++.++ .+|+||+..++.++..+.++++++.++|+||++|+|++++++...+++ +.++.|. T Consensus 155 g~~~~~~~~diiH~r~~~~dg-~~G~spi~~~~~~i~~~~~~~~~~~~~f~ng~~p~gil~~~~~l~~~e~~~~~~~~~~ 233 (251) T protein:vir:46 155 NIERNVKFEDMLDIKFYSLDG-INGLSLLDTLSRTIESDNNGKDFLNNFLRNGTHAGGILKMKGVLDNKKARDRAREEFP 233 (251) T ss_pred ceeEEECCccEEEecCcCCCC-eeecCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcEEEEeCCCCCCHHHHHHHHHHHH Confidence 778899999999999988776 679999999999999999999999999999999999999998765443 3466788 Q ss_pred HHHhccccCCceeeccCC Q lcl|Aclame:pro 232 RSFMKRSRSGGPVVLDDL 249 (392) Q Consensus 232 ~~~~~~~~~g~~~vl~~g 249 (392) +.+.|.+|+|++++..+- T Consensus 234 ~~~~g~~n~g~~~~gm~~ 251 (251) T protein:vir:46 234 KVLVELNKLGKLSYSMNQ 251 (251) T ss_pred HHhcCcccccccccccCC Confidence 888999999987763222 No 97 >protein:vir:267 Length: 348 # NCBI annotation: putative capsid portal protein # Family: family:all:196 # MgeID: mge:7 # MgeName: K139 # Cross-refs: genbank:acc:NP_536647;genbank:gi:17975125;genbank:GeneID:929081 Probab=100.00 E-value=7.3e-49 Score=284.50 Aligned_cols=319 Identities=9% Similarity=-0.036 Sum_probs=214.5 Q ss_pred CcchhhHhhcccccccccc-ccc-ccccccchh---hhhhhhcCCCCc----ccchh----hhhcchHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVG-SVQ-SYFPDGNDA---QIMESLLGDNNE----WVSAR----AALRNSDLFSIILQLSSDL 67 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~-~~~-~~~~~~~~~---~~~~~~~~~~~~----~v~~~----~a~~~~~v~~~i~~ia~~i 67 (392) |.=..-+........+... +-. .|.+..... ..++-+....+. +++.. ..-.++...+||...++.+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~epp~~~~~La~l~~~n~~h~~~i~~k~N~l 80 (348) T protein:vir:26 1 MTEQLIHSHTTDGTESKSVYSFDPNPEPVDTNSWMTRYCELFYNDFDDYWEPPISLKGLAEIANANGYHGSLLKARANYV 80 (348) T ss_pred CCccccchhhccccCCceEEEecCCCeeecCcchHHHHHHHHhcCCCccccCCCCHHHHHHHHhhhhhhhhhHhhhhhHH Confidence 2211111111110000000 000 111111111 011111111111 11111 1112333344444444333 Q ss_pred hhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEE Q lcl|Aclame:pro 68 AIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNI 147 (392) Q Consensus 68 a~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~ 147 (392) ++ ..+||++||.++|++. +.+++++||+|++++|+..|++++|+|+++..|++..+.+ ++.+ T Consensus 81 ~~-------------~~~Pn~~~t~~~f~~~-~~d~ll~Gnay~~~~rn~~G~~~~L~~l~~~~v~~~~d~~----~~~~ 142 (348) T protein:vir:26 81 AG-------------RFMNGGGLPMYKMNSA-CWDYFGLGMSAFVKIRSYLKNVIALEPLPMVHMRKRKNGD----FVQL 142 (348) T ss_pred hh-------------cccCCCCCCHHHHHHH-HHHHHhcCCeEEEEEEcCCCcEEEEEEecCceeEeeecCc----EEEE Confidence 32 3479999999999765 5799999999999999999999999999999998875432 2222 Q ss_pred EecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC-CCchH-- Q lcl|Aclame:pro 148 TFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG-GLLSD-- 224 (392) Q Consensus 148 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~-~~~~~-- 224 (392) .. .+..+.|++++|||++.+++.+..+|+|++..+++++.++.++.++..++|+||++|++|+.+++. .++++ T Consensus 143 ~~----~g~~~~f~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il~~~~~~ls~e~~~ 218 (348) T protein:vir:26 143 LR----NNEQKVFKAKDVIFIPQYDPQQQIYGLPDYLGSIQSSLLNRDATLFRRRYYLNGAHMGFIFYATDPNLSEADEK 218 (348) T ss_pred Ee----cCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHHH Confidence 22 245678999999999998888888999999999999999999999999999999999999987653 44433 Q ss_pred HHHHHHHHHHhccccCCceeec-----cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc---c-ch Q lcl|Aclame:pro 225 KDKASRSRSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ---Q-SS 295 (392) Q Consensus 225 ~~~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~---~-~~ 295 (392) +.++.+.+ ..|..|.++++++ ++|+++++++.+++|+||+|.+++++++||++|||||+++|+..++ . +. T Consensus 219 ~lk~~~~~-~~G~~n~~~~~vl~~~g~~~Gi~~~pis~~~~d~qf~e~k~~t~~dIa~af~VPp~llGi~~~~~~~~sn~ 297 (348) T protein:vir:26 219 ALKEKIAS-SKGIGNFRSMFVNIPNGKEKGIQLIPVGDIATKDEFERIKNITAQDIFVGHRFPAGMGGMLPQQGANVPDP 297 (348) T ss_pred HHHHHHHH-hcCcccccceeEEcCCCCccceeEEEccCChhHHHHHHHHHhhHHHHHHHhCCCHHHccccCCCCCccccH Confidence 23344444 5788899999998 7899999999999999999999999999999999999999964332 2 33 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh----hhcccchhhhhcchHHHHHHH Q lcl|Aclame:pro 296 IQQISGMYASALNRYLRPAISELEYKLSD----HISVNMRPAIDPLGDNYLSTI 345 (392) Q Consensus 296 ~~~~~~~~~~~l~p~l~~i~~~l~~~l~~----~~~~d~~~~~~~~~~~~~~~~ 345 (392) +++.+.|++++|.|+++.|+++|+.+|.. .++||++...+.+ .+.++ T Consensus 298 e~~~~~f~~~~l~P~~~~ie~~ln~~l~~~~~~~~~fdl~~~~e~~---~~~a~ 348 (348) T protein:vir:26 298 LKVSQVYDFYEVIPVCKRFMDAVNNDPEIPDNLKLKFNLNPGVESA---NGSAV 348 (348) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCccEEEEecCcccccc---hhhcC Confidence 56789999999999999999999998752 2344443322211 11111 No 98 >protein:vir:3743 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:79 # MgeName: HP1 # Cross-refs: genbank:acc:NP_043484;genbank:gi:9628619;genbank:GeneID:1261113 Probab=100.00 E-value=1e-48 Score=283.73 Aligned_cols=310 Identities=8% Similarity=-0.047 Sum_probs=212.5 Q ss_pred hccccccccccc-cccc---ccccchhhhhhhhcCC-------CCccc----chh----hhhcchHHHHHHHHHHHhhhh Q lcl|Aclame:pro 9 INQTNDPPEVGS-VQSY---FPDGNDAQIMESLLGD-------NNEWV----SAR----AALRNSDLFSIILQLSSDLAI 69 (392) Q Consensus 9 ~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~-------~~~~v----~~~----~a~~~~~v~~~i~~ia~~ia~ 69 (392) +++....+.... ...+ ..-+...+.-.++..+ ++..+ +.. ..-.++...+||..-++.++ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~epp~~~~~la~~~~~~~~h~~~i~~k~n~l~- 79 (345) T protein:vir:37 1 MKTNVKTDNKKGIVIAPINDRTFSLSEITASPALDYVGIGFDENYNCYLPPVNRHALAKLPHQNAQHGGILHSRANMVS- 79 (345) T ss_pred CCccccccchhhhcCCCceEEEeecCCcccchhhcccceeeecCCccccCCCCHHHHHHHhhcchhhcchhhhhhhHHh- Confidence 222222111100 0000 0000111111111111 11111 111 00122333334433333332 Q ss_pred CceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEe Q lcl|Aclame:pro 70 VKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITF 149 (392) Q Consensus 70 ~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~ 149 (392) ...+||++||+++|++ ++.+++++||+|++++|+..|++++|+|++|..|++..+.+ ..++.... T Consensus 80 ------------~~~~Pn~~~t~~~f~~-~v~d~ll~Gnay~~i~rn~~G~~~~L~pl~~~~vr~~~d~~--~~~~~~~~ 144 (345) T protein:vir:37 80 ------------ATYEGGKALSKMEMRA-LCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVHKDGG--YSYLMKKS 144 (345) T ss_pred ------------hccCCCCCCCHHHHHH-HHHHHHhcCCeEEEEEECCCCCEEEEEEecCceeEEeecCC--eeEEEeee Confidence 2448999999999965 55789999999999999999999999999999998865543 33322222 Q ss_pred cCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCC-CCCchH--HH Q lcl|Aclame:pro 150 DDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKG-GGLLSD--KD 226 (392) Q Consensus 150 ~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~-~~~~~~--~~ 226 (392) .....+....+++++|||++.+++.+..+|+|++..+..++.++.++.+|+.++|+||++|++|+.+++ ..++++ +. T Consensus 145 ~~~~~g~~~~~~~~eViHir~~~~~~~~~Gl~~~~~a~~si~l~~~a~~~~~~~f~NGa~~~~Il~~t~~~l~~e~~~~l 224 (345) T protein:vir:37 145 LYDTAQEIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTDPDLTEEMEEEI 224 (345) T ss_pred eeccCceEEEEccccEEEEcCCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEeCCCCCCHHHHHHH Confidence 223346678899999999999888788899999999999999999999999999999999999998765 344433 22 Q ss_pred HHHHHHHHhccccCCceeec-----cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---c-hHH Q lcl|Aclame:pro 227 KASRSRSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---S-SIQ 297 (392) Q Consensus 227 ~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---~-~~~ 297 (392) ++++.+ ..+..|.+.++++ ++|++|++++.+++|+||++++++++++||++|||||.++|+..+++ + .++ T Consensus 225 k~~~~~-~~g~~n~~~~~i~~~~g~~~G~~~~pl~~~~~d~qf~e~k~~~~~dI~~a~~VPp~liGi~~~~t~~~s~~e~ 303 (345) T protein:vir:37 225 ARKISE-SKGVGNFRSMFVNIAGGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGGLGDPLK 303 (345) T ss_pred HHHHHH-hcCccccCceeEecCCCCccceeEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhccccCCCCCcccHHH Confidence 334444 3466677777666 56899999999999999999999999999999999999999754432 3 346 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh----hhhcccchhhhh Q lcl|Aclame:pro 298 QISGMYASALNRYLRPAISELEYKLS----DHISVNMRPAID 335 (392) Q Consensus 298 ~~~~~~~~~l~p~l~~i~~~l~~~l~----~~~~~d~~~~~~ 335 (392) +.+.|++++|.|+++.|+++++..+. ..++||...+++ T Consensus 304 ~~~~f~~~~l~P~~~~ie~~ln~~~e~~~~~~i~F~~~~l~k 345 (345) T protein:vir:37 304 YREVYHYDEVMPLQEIIAETINQDPEIKNLLKIKFREQNFAK 345 (345) T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCCcceEEECchhhcC Confidence 78899999999999999999997531 235666555444 No 99 >protein:vir:3780 Length: 345 # NCBI annotation: orf15 # Family: family:all:196 # MgeID: mge:328 # MgeName: HP2 # Cross-refs: genbank:acc:NP_536820;genbank:gi:17981829;genbank:GeneID:929208 Probab=100.00 E-value=8.2e-49 Score=284.21 Aligned_cols=317 Identities=7% Similarity=-0.044 Sum_probs=212.3 Q ss_pred hccccccccccc--------ccccccccchhhh---hhhhcCCCCcccchhhhhcchHHHHHHHHHHHh--hhhCceeee Q lcl|Aclame:pro 9 INQTNDPPEVGS--------VQSYFPDGNDAQI---MESLLGDNNEWVSARAALRNSDLFSIILQLSSD--LAIVKINAE 75 (392) Q Consensus 9 ~~~~~~~~~~~~--------~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~--ia~~p~~~~ 75 (392) +++....+.... ...-+++-....+ .+-+...++..+. -|.-+.++..+.++ -.+-.+.. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~~~~~e------pp~~~~~la~l~~~~~~h~~~i~~- 73 (345) T protein:vir:37 1 MKTNVKTDNKKGIVIAPINDRTFSLNEISASPALDYVGIGFDENYNCYL------PPVNRHALAKLPHQNAQHGGILHS- 73 (345) T ss_pred CCCCccccchhhcccCcceeEEeecCCcccccchhhhhhhhcCCccccC------CCCCHHHHHHHhhcccccccceee- Confidence 222222111110 1111110000000 0001111121111 11112222222111 11111222 Q ss_pred ccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCccee Q lcl|Aclame:pro 76 KKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIE 155 (392) Q Consensus 76 ~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 155 (392) ++.......+||++||+++|++ ++.+++++||+|++++|+..|++++|+|+++..|++..+.+. .+..........+ T Consensus 74 k~n~l~~~~~Pn~~lt~~~f~~-~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~vr~~~d~~~--~~~~~~~~~~~~g 150 (345) T protein:vir:37 74 RANMVSSLYEGGKALSRMDMRA-LCLNLIQFGDVGLLKVRNGFGQVVRLVPLSSLYLRVRKDGGY--SYLMKKSLYDTAQ 150 (345) T ss_pred echHHHhhccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCcEEEEEEEcCceeEEEEeCCe--eEEEEEeEecCCc Confidence 2222223458999999999975 567899999999999999999999999999999988766433 2222222223345 Q ss_pred eeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCC-CCCchHH-HHHHHHHH Q lcl|Aclame:pro 156 PILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKG-GGLLSDK-DKASRSRS 233 (392) Q Consensus 156 ~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~-~~~~~~~-~~~~~~~~ 233 (392) ..+.+++++|||++.+++.+..+|+|++..+..++.++.++.+|+.++|+||++|++||.+++ ..++++. ..++..+. T Consensus 151 ~~~~~~~~dVihir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NG~~p~~Il~~~d~~l~~e~~~~lk~~~~~ 230 (345) T protein:vir:37 151 EIYRYDAKDIIFIKLYDPMQQVYGSPDYVGGIQSALLNSDATVFRRRYFSNGAHMGFILYSTDPDLTEEMEEEIARKISE 230 (345) T ss_pred eEEEEccccEEEecCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCcceEEEecCCCCCHHHHHHHHHHHHH Confidence 678899999999999888888899999999999999999999999999999999999999864 3343332 22333344 Q ss_pred HhccccCCceeec-----cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---c-hHHHHHHHHH Q lcl|Aclame:pro 234 FMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---S-SIQQISGMYA 304 (392) Q Consensus 234 ~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---~-~~~~~~~~~~ 304 (392) ..|..|.++++++ ++|++|++++.+++|+||+|++++++++||++|||||.++|+..+++ + .+++.+.|++ T Consensus 231 ~~g~~n~~~~~i~~p~g~~~G~~~~pls~~~~d~qf~e~k~~~~~dIa~a~~VPp~llGi~~~~~~~~~~~e~~~~~f~~ 310 (345) T protein:vir:37 231 SKGVGNFRSMFVNIANGHPDGLKVIPIGDTGTKDEFANIKNISAQDVLTAHRFPAGLSGIIPTNTGGLGDPLKYREVYHY 310 (345) T ss_pred hcCcccccceEEEcCCCcccceEEEEccCChhHHHHHHHHHHhHHHHHHHhCCCHHHhCccCCCCCCcccHHHHHHHHHH Confidence 6788898998887 68999999999999999999999999999999999999999754332 3 3467789999 Q ss_pred HHHHHHHHHHHHHHHHHhh----hhhcccchhhhhcchHHHHH Q lcl|Aclame:pro 305 SALNRYLRPAISELEYKLS----DHISVNMRPAIDPLGDNYLS 343 (392) Q Consensus 305 ~~l~p~l~~i~~~l~~~l~----~~~~~d~~~~~~~~~~~~~~ 343 (392) ++|.|+++.|+++++..+. ..++|+...+. + T Consensus 311 ~~l~P~~~~ie~~ln~~~~~~~~~~i~F~~~~L~--------~ 345 (345) T protein:vir:37 311 DEVMPLQEIIAETINQDPEIKNLLKIKFREQNFA--------K 345 (345) T ss_pred HHHHHHHHHHHHHhhhhccCCCcceEEecchhhc--------C Confidence 9999999999999986531 12344332222 1 No 100 >protein:vir:1150 Length: 350 # NCBI annotation: predicted capsid packaging protein # Family: family:all:196 # MgeID: mge:24 # MgeName: phi CTX # Cross-refs: genbank:acc:NP_490599;genbank:gi:17313219;genbank:GeneID:927315 Probab=100.00 E-value=2.2e-48 Score=281.82 Aligned_cols=321 Identities=8% Similarity=0.009 Sum_probs=207.3 Q ss_pred chhhHhhccccccccc-ccccccccccchhhhhhhhcCCCCccc-chhhhhcchHHHHHHH---------HHHHhh---- Q lcl|Aclame:pro 3 LPILNFINQTNDPPEV-GSVQSYFPDGNDAQIMESLLGDNNEWV-SARAALRNSDLFSIIL---------QLSSDL---- 67 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~a~~~~~v~~~i~---------~ia~~i---- 67 (392) |+=.+..+++...... .......+... .-...|+-+....| +....+....++.|-+ -||+.+ T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~v~~~~~~~~y~~~~~~~~~~~pp~~~~~la~~~~~~~ 78 (350) T protein:vir:11 1 MSKRRSHRRQQPVTVQSAQEGEFIPRQG--GRAEAFTFGDPMPVLDGRGILDYLECWPNGRWYEPPLSMEGLAKSVGSSV 78 (350) T ss_pred CCccccCCCcCccccCCcchhhhccccc--cceEEEEeCCceeecCcchhhHHHHHhhcCccccCCCCHHHHHHHHhhhh Confidence 3222111111000000 00000000000 00000000000000 1110111111111110 011111 Q ss_pred -hhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEE Q lcl|Aclame:pro 68 -AIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYN 146 (392) Q Consensus 68 -a~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~ 146 (392) .+-++.. ++.......+||++||+++|++ ++.+++++||||++++|+..|++++|+|++|..|++..+.+ .++. T Consensus 79 ~h~~~l~~-k~n~l~~~~~Pn~~~t~~~f~~-~v~d~ll~Gnay~~~~rn~~G~~~~L~~l~~~~vr~~~~~~---~~~~ 153 (350) T protein:vir:11 79 YLQSGLKF-KRNMLAKTFIPHRLLSRATFEQ-FSLDWLTFGSAYLEQPRSRLGTRMPLQAPLAKYMRRGTDLE---TFYQ 153 (350) T ss_pred hhccchhh-hhhhhhhcccCCCCCCHHHHHH-HHHHHHhcCCeEEEEEEcCCCCEEEEEEeCCceeEeeecCC---eEEE Confidence 1111111 1111122458999999999976 56799999999999999999999999999999999876543 2333 Q ss_pred EEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCC-CCCchH- Q lcl|Aclame:pro 147 ITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKG-GGLLSD- 224 (392) Q Consensus 147 ~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~-~~~~~~- 224 (392) +. .++..+.+++++|||++.+++.+..+|+|++..+..++.++.++..+..++|+||++|+|||++++ ..++++ T Consensus 154 ~~----~~~~~~~~~~~eVihir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~~~gil~~~~~~ls~e~~ 229 (350) T protein:vir:11 154 VR----SWKDEHEFEKGSVIQLREADINQEIYGVPEWFCALQSALLNESATLFRRKYYNNGSHAGFILYMTDAAQNEEDI 229 (350) T ss_pred Ee----eCCeEEEECcccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHHHH Confidence 32 234567899999999999988888999999999999999999999999999999999999999875 344443 Q ss_pred -HHHHHHHHHHhccccCCceeec-----cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---c- Q lcl|Aclame:pro 225 -KDKASRSRSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---S- 294 (392) Q Consensus 225 -~~~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---~- 294 (392) +.++.|. ...|..|+|+++++ ++|++|++++.+++|+||+|++++++++||++|||||.++|+..+++ + T Consensus 230 ~~l~~~~~-~~~G~~N~~~~~v~~~~g~~~g~~~~pl~~~~~d~qf~e~k~~~~~eIa~a~~VPp~llGi~~~~t~~~sn 308 (350) T protein:vir:11 230 DALRTALK-TAKGPGNFRNLFVYAPNGKKEGIQLIPVSEVAAKDEFGSIKNISRDDQLAGLRVYPQLMGVVPQNAGGFGS 308 (350) T ss_pred HHHHHHHH-HhcCccccCceeeecCCCCccceEEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHhcccCCCCCCcCC Confidence 2334444 46788999999988 46899999999999999999999999999999999999999754432 3 Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hcccchhhhhcchHHHHHHHHHH Q lcl|Aclame:pro 295 SIQQISGMYASALNRYLRPAISELEYKLSDH-ISVNMRPAIDPLGDNYLSTISTA 348 (392) Q Consensus 295 ~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~-~~~d~~~~~~~~~~~~~~~~~~~ 348 (392) .+++.+.|++++|.|+++.|++ ++.+|+.+ ++|+. . ++..+ T Consensus 309 ~e~~~~~f~~~~L~P~~~~ie~-ln~~l~~~~~~F~~-~-----------~~~~l 350 (350) T protein:vir:11 309 ISDAAAVWASLELAPMQTRLQQ-VNEMIGEEVVRFAQ-F-----------DAPGL 350 (350) T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHhhcCccccccCc-c-----------cccCC Confidence 3467889999999999999985 77777654 23321 0 11111 No 101 >protein:vir:6058 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:126 # MgeName: WPhi # Cross-refs: genbank:acc:NP_878199;genbank:gi:33438898;genbank:GeneID:1457733 Probab=100.00 E-value=1.5e-48 Score=282.83 Aligned_cols=313 Identities=12% Similarity=0.074 Sum_probs=205.9 Q ss_pred hhHhhccccccccc--c-ccc--------ccccccchh----hhhhhhcCCCCcccchhhhhcchHHHHHHHHH--HHhh Q lcl|Aclame:pro 5 ILNFINQTNDPPEV--G-SVQ--------SYFPDGNDA----QIMESLLGDNNEWVSARAALRNSDLFSIILQL--SSDL 67 (392) Q Consensus 5 ~~~~~~~~~~~~~~--~-~~~--------~~~~~~~~~----~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~i--a~~i 67 (392) ..+..+++..++.. + ... .|.+..... ....+. +|..+.+ |.-+.++..+ |+.. T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~f~~p~~v~~~~~~~~~~~~~~---~~~~~~p------p~~~~~la~~~~a~~~ 71 (344) T protein:vir:60 1 MSKKKGKTLQPAAKKMTASAPKMEAFTFGEPVPVLDRRDILDYVECIS---NGRWYEP------PISFTGLAKSLRAAVH 71 (344) T ss_pred CCcccCCCCCchHHhhcCCcCcEEEEEcCCceeecCCcchhHHHHhhh---cCccccC------CCCHHHHHHHHHhhhh Confidence 11211111111100 0 000 011100000 001111 1111110 0001111111 1111 Q ss_pred hhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEE Q lcl|Aclame:pro 68 AIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNI 147 (392) Q Consensus 68 a~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~ 147 (392) .+-++..++ .......+||++||+++| +.++.+++++||||++++|+..|++++|+|+++..|++..+.+. ++.+ T Consensus 72 h~~~i~~k~-n~l~~~~~Pn~~~t~~~f-~~~~~d~ll~Gnay~~i~rn~~G~~~~L~~l~~~~vr~~~~~~~---~~~v 146 (344) T protein:vir:60 72 HSSPIYVKR-NILASTFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEEDV---YWWV 146 (344) T ss_pred hccchhhhh-hHHHhhccCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEcCcceEEEeecCCe---EEEE Confidence 111222211 111124589999999999 67889999999999999999999999999999999998766542 2222 Q ss_pred EecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC-CCchHH- Q lcl|Aclame:pro 148 TFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG-GLLSDK- 225 (392) Q Consensus 148 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~-~~~~~~- 225 (392) . ..+..+.+++++|||++.+++.+..+|+||+..+..++.++.+++++..++|+||++|++||++++. .++++. T Consensus 147 ~----~~~~~~~~~~~eIiHir~~~~~~~~yGlsp~~~a~~si~l~~~a~~~~~~~f~NG~~pg~il~~~~~~ls~e~~~ 222 (344) T protein:vir:60 147 P----SFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDRNDIE 222 (344) T ss_pred c----cCCeEEEEcCccEEEEcCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHHHHH Confidence 2 2345678999999999998887888999999999999999999999999999999999999998753 444332 Q ss_pred -HHHHHHHHHhccccCCceeec------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc---c- Q lcl|Aclame:pro 226 -DKASRSRSFMKRSRSGGPVVL------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ---S- 294 (392) Q Consensus 226 -~~~~~~~~~~~~~~~g~~~vl------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~---~- 294 (392) .+++|.+. .+. ++++.++| ++|++|++++.+++|+||+|++++++++||++|||||.++|+.++++ + T Consensus 223 ~ik~~~~~~-~g~-~~~r~~~l~~p~g~~~g~~~~pis~~~~d~qf~e~k~~~~~eIa~af~VPp~llGi~~~~t~~~~n 300 (344) T protein:vir:60 223 MLRENMVKS-KGR-NNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGSLGD 300 (344) T ss_pred HHHHHHHHh-cCC-CCCcceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhcccCCCCCcccc Confidence 23334332 343 55666666 57999999999999999999999999999999999999999754432 3 Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hcccchhhhhcch Q lcl|Aclame:pro 295 SIQQISGMYASALNRYLRPAISELEYKLSDH-ISVNMRPAIDPLG 338 (392) Q Consensus 295 ~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~-~~~d~~~~~~~~~ 338 (392) .+++.+.|++++|.|+++.|+ +|+.+|+.. ++|+.-.+-..|. T Consensus 301 ~e~~~~~f~~~~L~Pl~~~~e-~ln~~lg~~~i~F~~~~l~~~d~ 344 (344) T protein:vir:60 301 IEKVAKVFVRNELIPLQDRIR-EINGWLGQEVIRFKNYSLDTDNG 344 (344) T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhcCCcccccCccccCCCCC Confidence 356789999999999999997 588888643 4554332222222 No 102 >protein:vir:5691 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:120 # MgeName: L-413C # Cross-refs: genbank:acc:NP_839850;genbank:gi:30065705;genbank:GeneID:1260599 Probab=100.00 E-value=4.1e-48 Score=280.39 Aligned_cols=312 Identities=10% Similarity=0.069 Sum_probs=206.7 Q ss_pred chhhHhhcccccccccccc------cccccccchhh----------hhhhhcCCCCcccchhhhhcchHHHHHHHHHHHh Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSV------QSYFPDGNDAQ----------IMESLLGDNNEWVSARAALRNSDLFSIILQLSSD 66 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~------~~~~~~~~~~~----------~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ 66 (392) |+ .-+++...+..... ..-++.+...+ ++.+. ++..+.+ |.-+.++..+.++ T Consensus 1 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~---~~~~~~p------p~~~~~la~~~~a 68 (344) T protein:vir:56 1 MS---KKKGKTPQPAAKTMTASAPKMEAFTFGEPVPVLDRRDILDYVECIS---NGRWYEP------PVSFTGLAKSLRA 68 (344) T ss_pred CC---CCCCCCCchhhHHhhcCCCceEEEEcCCceeecCcchhhhHHHhhh---cCccccC------CCCHHHHHHHHhh Confidence 22 11111111100000 00011011111 11111 1111110 1112222222111 Q ss_pred h--hhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEE Q lcl|Aclame:pro 67 L--AIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMY 144 (392) Q Consensus 67 i--a~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~ 144 (392) - -+-++..++. ......+||++||+++| +.++.+++++||+|++++|+..|++++|+|+++..|++..+.+ . + T Consensus 69 ~~~h~s~i~~k~n-~l~~~~~Pnp~~t~~~f-~~~~~d~ll~Gnay~~~~rn~~G~~~~L~pl~~~~v~~~~~~~--~-~ 143 (344) T protein:vir:56 69 AVHHSSPIYVKRN-ILASTFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEED--V-Y 143 (344) T ss_pred hhhhCccceehhh-hHHhhcCCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEeCCceeEEeecCC--E-E Confidence 1 1112222211 11124589999999999 6778999999999999999999999999999999999876543 2 2 Q ss_pred EEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC-CCch Q lcl|Aclame:pro 145 YNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG-GLLS 223 (392) Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~-~~~~ 223 (392) +.+. ..+..+.+++++|||++.+++.+..+|+|++..++.++.++.+++++..++|+||++|++||++++. .+++ T Consensus 144 ~~~~----~~g~~~~~~~~dIiHir~~~~~~~~~Gls~~~~a~~si~l~~~a~~~~~~~f~NGa~pg~Il~~~d~~ls~e 219 (344) T protein:vir:56 144 WWVP----SFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDRN 219 (344) T ss_pred EEEe----cCCeEEEEcCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCCCCCHH Confidence 2222 2356678999999999998887788999999999999999999999999999999999999998753 4443 Q ss_pred HH--HHHHHHHHHhccccCCceeec------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc-- Q lcl|Aclame:pro 224 DK--DKASRSRSFMKRSRSGGPVVL------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-- 293 (392) Q Consensus 224 ~~--~~~~~~~~~~~~~~~g~~~vl------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-- 293 (392) +. .+++|.+ ..+ .+++++++| ++|++|++++.+++|+||+|++++++++||++|||||.++|+..+++ T Consensus 220 ~~~~lk~~~~~-~~g-~~~~r~l~l~~p~g~~~G~~~~pis~~~~d~qf~e~k~~s~~eIa~afrVPp~llGi~~~~t~~ 297 (344) T protein:vir:56 220 DIEMLRENMVK-SKG-RNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGS 297 (344) T ss_pred HHHHHHHHHHH-hcC-CCCccceEEecCCCCccceeEEEcCCChHHHHHHHHHHhhHHHHHHHhCCCHHHhccCCCCCCc Confidence 32 2333433 233 467788887 57999999999999999999999999999999999999999754432 Q ss_pred --chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hcccchhhhhcch Q lcl|Aclame:pro 294 --SSIQQISGMYASALNRYLRPAISELEYKLSDH-ISVNMRPAIDPLG 338 (392) Q Consensus 294 --~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~-~~~d~~~~~~~~~ 338 (392) +.+++.+.|++++|.|+++.|++ ++.+|+.+ ++|+.-.+...+. T Consensus 298 ~~n~eq~~~~f~~~tL~Pl~~~ie~-~n~~l~~~~~~F~~y~l~~~~~ 344 (344) T protein:vir:56 298 LGDIEKVAKVFVRNELIPLQDRIRE-INGWIGQEVIRFKNYSLDTDNG 344 (344) T ss_pred cccHHHHHHHHHHHHHHHHHHHHHH-HHhhhccccccCCCccccccCC Confidence 33567889999999999999985 66677543 4444322222222 No 103 >protein:vir:78749 Length: 337 # NCBI annotation: putative portal protein # Family: family:all:196 # MgeID: mge:1857 # MgeName: phiO18P # Cross-refs: genbank:acc:YP_001285643;genbank:gi:148727149;genbank:GeneID:5220095 Probab=100.00 E-value=9e-48 Score=278.51 Aligned_cols=309 Identities=8% Similarity=-0.022 Sum_probs=214.6 Q ss_pred hcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhh---Cceee------eccc- Q lcl|Aclame:pro 9 INQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAI---VKINA------EKKK- 78 (392) Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~---~p~~~------~~~~- 78 (392) +.++...+..+...++. ..|. ++ ...+| +....+..|+...-+..+. -|+.. ++.. T Consensus 1 m~~~~~~~~~~~~~~~~------~~~~--~~-~p~~~-----~~~~~~~~~~~~~~~~~~~~~~pP~~~~~La~l~~~~~ 66 (337) T protein:vir:78 1 MTKRQQQPAQAAASSPR------PSVV--FS-MPEAI-----DPTAWMTDYTGVFYNPYGEYYQPPIDRKGLAKVARANA 66 (337) T ss_pred CCCcccCcccccccCce------eEEE--ec-Ccccc-----cCcchhHhhhhhhhccCcceecCCCCHHHHHHHhhcch Confidence 33333322222111110 0011 11 11111 2223344444444333332 12211 1111 Q ss_pred --cccccccCCccCCHH----HHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCc Q lcl|Aclame:pro 79 --NQGIIDNPSTNANKH----GFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDP 152 (392) Q Consensus 79 --~~~~~~~PN~~~s~~----~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~ 152 (392) ...+..+||+.++.+ ++++.++.+++++||+|++++|+..|+|++|+|+++..|++..+ +. .++... T Consensus 67 ~h~~~L~~k~N~~~~~f~~~~~~~~~~~~d~ll~GNay~~~~rn~~G~~~~L~pl~~~~v~~~~d--~~-~~~~~~---- 139 (337) T protein:vir:78 67 HHGAILMARRNMVAGRFTNQRATITAFVHNYLQFGDGGLLKLRNSFGQVVGLHPLSSVYLRRRED--GC-FVYLQQ---- 139 (337) T ss_pred hhhhHHHhhhccccccCcCcHHHHHHHHHHHHhhCCeEEEEEECCCCcEEEEEEeCCceeEeeeC--Ce-EEEEEc---- Confidence 113456899877654 68899999999999999999999999999999999999987654 22 222211 Q ss_pred ceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC-CCchHH-HHHHH Q lcl|Aclame:pro 153 KIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG-GLLSDK-DKASR 230 (392) Q Consensus 153 ~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~-~~~~~~-~~~~~ 230 (392) ++..+.+++++|||++.+++.+..+|+|++..++.++.++.+++++..++|+||++|+||+.+++. .++++. ..++. T Consensus 140 -~~~~~~~~~~eIiHik~~~~~~~~~Gls~~~~a~~si~l~~aa~~~~~~~f~NGa~p~~il~~~~~~l~~e~~~~lk~~ 218 (337) T protein:vir:78 140 -GKPNLIYRPDDVIWLAQYDPEQQVYGMPDYLGGLQSALLNQDATLFRRRYFLNGAHMGFIFYATDPNMDDDTEEEMKEM 218 (337) T ss_pred -CCceEEECCccEEEECCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeEEcCCCCCCHHHHHHHHHH Confidence 245678999999999999888888999999999999999999999999999999999999998763 444332 22333 Q ss_pred HHHHhccccCCceeec-----cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc----cc-hHHHHH Q lcl|Aclame:pro 231 SRSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ----QS-SIQQIS 300 (392) Q Consensus 231 ~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~----~~-~~~~~~ 300 (392) .+.+.|..|.++++++ ++|++|++++.+++|+||+|++++++++||++|||||+++|+..++ ++ .+++.+ T Consensus 219 ~~~~~G~~n~~~~~v~~~~g~~~Gi~~~pis~~~~d~qfle~k~~s~~eIa~a~~VPp~llGi~~~~~~~~~~n~e~~~~ 298 (337) T protein:vir:78 219 IANSKGVGNFRSMFVNIPDGKPDGIKLIPVGDIATKDEFAAIKGITAQDVLTAHRYPPALAGIIPTNGGGGLGDPEKYDA 298 (337) T ss_pred HHHhcCcccccceEEEcCCCCccceeEEEcCCChhHHHHHHHHHHhHHHHHHHhCCCHHHcccccCCCcCccccHHHHHH Confidence 4557788899999888 6789999999999999999999999999999999999999964332 22 345678 Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhcchHHHHHHHHHHH Q lcl|Aclame:pro 301 GMYASALNRYLRPAISELEYKLSDHISVNMRPAIDPLGDNYLSTISTAT 349 (392) Q Consensus 301 ~~~~~~l~p~l~~i~~~l~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~ 349 (392) .|++++|.|+++.|+++++.+|.+..++. .+......++ T Consensus 299 ~f~~~~L~P~~~~ie~~~n~~ll~~~~~~----------~f~~~~~~~~ 337 (337) T protein:vir:78 299 TYARNEVLPLCELVQDAINSAGLPRALWV----------TFRETIGAAV 337 (337) T ss_pred HHHHHHHHHHHHHHHHHHhhhcCChhhce----------eccccccccC Confidence 99999999999999999998876532210 0111112222 No 104 >protein:vir:2013 Length: 344 # NCBI annotation: gpQ # Family: family:all:196 # MgeID: mge:315 # MgeName: P2 # Cross-refs: genbank:acc:NP_046757;genbank:gi:9630328;genbank:GeneID:1261529 Probab=100.00 E-value=3.2e-47 Score=275.45 Aligned_cols=315 Identities=11% Similarity=0.101 Sum_probs=205.9 Q ss_pred chhhHhhccccc-ccccccc--cc---cccccchhhhhh--hhcC-----CCCcccchhhhhcchHHHHHHHHH--HHhh Q lcl|Aclame:pro 3 LPILNFINQTND-PPEVGSV--QS---YFPDGNDAQIME--SLLG-----DNNEWVSARAALRNSDLFSIILQL--SSDL 67 (392) Q Consensus 3 Mg~~~~~~~~~~-~~~~~~~--~~---~~~~~~~~~~~~--~~~~-----~~~~~v~~~~a~~~~~v~~~i~~i--a~~i 67 (392) |+= -+++.. +...... .. -+..+...+++. ++.. .++..+.+ |.-+.++..+ |+.. T Consensus 1 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~f~~p~~v~~~~~~~~~~~~~~~~~~~~p------p~~~~~la~~~~a~~~ 71 (344) T protein:vir:20 1 MSK---KKGKTPQPAAKTMTASGPKMEAFTFGEPVPVLDRRDILDYVECISNGRWYEP------PVSFTGLAKSLRAAVH 71 (344) T ss_pred CCc---ccCCCCcchhhhhhccCCceEEEEcCCceEecCcchhhhhhhhhhcCceecC------CCCHHHHHHHHhhhhh Confidence 321 111111 0000000 00 000011111110 0000 01111110 1111121111 1111 Q ss_pred hhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEE Q lcl|Aclame:pro 68 AIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNI 147 (392) Q Consensus 68 a~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~ 147 (392) .+-++..++ .......+||++||+++| +.++.+++++||||++++|+..|++++|+|+++..|++..+.+ . ++.+ T Consensus 72 h~~~i~~k~-n~l~~~~~Pn~~lt~~~f-~~~~~d~ll~Gnay~~i~rn~~G~~~~L~pl~~~~vr~~~~~~--~-~~~~ 146 (344) T protein:vir:20 72 HSSPIYVKR-NILASTFIPHPWLSQQDF-SRFVLDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEED--V-YWWV 146 (344) T ss_pred hCccceehh-hhHHHhccCCCCCCHHHH-HHHHHHHHhcCCeEEEEEECCCCcEEEEEEcCCceeEeeecCC--E-EEEE Confidence 122332222 111124589999999999 6788999999999999999999999999999999999876543 2 2222 Q ss_pred EecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC-CCchHH- Q lcl|Aclame:pro 148 TFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG-GLLSDK- 225 (392) Q Consensus 148 ~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~-~~~~~~- 225 (392) . ..+..+.+++++|||++.+++.+..+|+|++..+..++.++.+++++..++|+||++|++|+.+++. .++++. T Consensus 147 ~----~~~~~~~~~~~eIiHir~~~~~~~~yGls~~~~a~~si~l~~~a~~~~~~~f~NGa~p~~Il~~~d~~l~~e~~~ 222 (344) T protein:vir:20 147 P----SFNEPTAFAPGSVFHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDRNDIE 222 (344) T ss_pred c----cCCeEEEEcCccEEEeCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEecCcCCCHHHHH Confidence 2 2345678999999999998887788999999999999999999999999999999999999998653 343322 Q ss_pred -HHHHHHHHHhccccCCceeec------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc----c Q lcl|Aclame:pro 226 -DKASRSRSFMKRSRSGGPVVL------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ----S 294 (392) Q Consensus 226 -~~~~~~~~~~~~~~~g~~~vl------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~----~ 294 (392) .++++.+ ..+ .++++.++| ++|++|++++.++.|+||+|++++++++||++|||||.++|+..+++ + T Consensus 223 ~ik~~~~~-~~g-~~n~r~l~l~~p~g~~~gi~~~pis~~~~d~qf~e~k~~s~~eIa~af~VPp~llGi~~~~t~~~~n 300 (344) T protein:vir:20 223 MLRENMVK-SKG-RNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAADLLDAHRIPFQLMGGKPENVGSLGD 300 (344) T ss_pred HHHHHHHH-hcC-CCCccceEEecCCCCccceeEEEcCCChhHHHHHHHHHhhHHHHHHHhCCCHHHhccCCCCCCcccc Confidence 2333333 233 355666666 47999999999999999999999999999999999999999754432 3 Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hcccchhhhhcchH Q lcl|Aclame:pro 295 SIQQISGMYASALNRYLRPAISELEYKLSDH-ISVNMRPAIDPLGD 339 (392) Q Consensus 295 ~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~-~~~d~~~~~~~~~~ 339 (392) .+++.+.|++++|.|+++.++ +++.+|+.. ++|+.-.+ +.+.+ T Consensus 301 ~e~~~~~f~~~~l~P~~~~~e-~in~~lg~~~i~F~~~~l-~~~d~ 344 (344) T protein:vir:20 301 IEKVAKVFVRNELIPLQDRIR-EINGWLGQEVIRFKNYSL-DTDND 344 (344) T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhcCCcccccCcccc-ccCCC Confidence 356789999999999999997 577777643 45553322 22222 No 105 >protein:vir:98853 Length: 219 # NCBI annotation: hypothetical protein # Family: family:all:196 # MgeID: mge:1495 # MgeName: F108 # Cross-refs: genbank:acc:YP_654729;genbank:gi:109302914;genbank:GeneID:4156058 Probab=100.00 E-value=6e-39 Score=230.13 Aligned_cols=202 Identities=8% Similarity=-0.031 Sum_probs=152.6 Q ss_pred ceeeecCccceEEEEEEe-cCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCc Q lcl|Aclame:pro 132 VNTYYFEYENGMYYNITF-DDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNV 210 (392) Q Consensus 132 v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~ 210 (392) |++ .+++. ++|.+.. .....+...++++++|+|+|++++.+.++|+||+..++.++..+.++.+|+.++|+||++| T Consensus 1 ~r~--~~dg~-~~y~~~~~~~~~~g~~~~~~~~eilH~r~~~~~~~~~Glspi~~a~~~i~~~~aa~~~~~~~f~Ng~~p 77 (219) T protein:vir:98 1 MRV--CKDGN-YKYLMKKSLYDTKSEIYEYNKNDVIFIKLYDPMQQVYGSPDYVGGITSALLNSDATIFRRRYYSNGAHM 77 (219) T ss_pred Cce--eecCe-EEEEEecceecCCceeEEeccccEEEecCCCCCCCcceecHHHHHHHHHHHHHHHHHHHHHHHhcCCCC Confidence 333 33333 3333322 2233456788999999999998877778999999999999999999999999999999999 Q ss_pred ceEEEeCCC-CCchH--HHHHHHHHHHhccccCCceeec-----cCCceEeecccChhhHHHHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 211 PGVLTVKGG-GLLSD--KDKASRSRSFMKRSRSGGPVVL-----DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLP 282 (392) Q Consensus 211 ~~il~~~~~-~~~~~--~~~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP 282 (392) +|||++++. +++++ +.++.| +...|..|+++++++ ++|++|++++++++|+||+|++++++++||++|||| T Consensus 78 ~gil~~~~~~l~~e~~~~~~~~~-~~~~g~~n~~~~~l~~~gg~~~G~~~~~~~~~~~d~qfle~rk~~~~eIa~~fgVP 156 (219) T protein:vir:98 78 GFILYSTDPDMTEEMEDEIAERI-RDSKGVGNFRSMFVNIAGGHPDGLKVIPIGDTGQKDEFANIKNISAQDVLTSHRFP 156 (219) T ss_pred ceEEEeCCCCCCHHHHHHHHHHH-HHhcCcccccceeEecCCCCccceeEEEccCCHHHHHHHHHHHhhHHHHHHHhCCC Confidence 999998763 44432 223344 445677787777776 579999999999999999999999999999999999 Q ss_pred HHHcCCcccc----cchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-h---hhcccchhhhhcc Q lcl|Aclame:pro 283 DSYIGGQGDQ----QSSIQQISGMYASALNRYLRPAISELEYKLS-D---HISVNMRPAIDPL 337 (392) Q Consensus 283 ~~~lg~~~~~----~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~-~---~~~~d~~~~~~~~ 337 (392) |++||..+++ ++.+++...|+++||.|++..|+++|+.++. + .++|+....-+.+ T Consensus 157 p~~lG~~~~~~~~~sn~eq~~~~f~~~tL~P~~~~ie~~ln~~~~~~~~~~~~F~~~~~~d~~ 219 (219) T protein:vir:98 157 PGLSGIIPVNTAGLGDPLKIREAYQADEVLPLQEIIAESINSDYEIKSALKVNFKQPEKRDKN 219 (219) T ss_pred HHHcccccCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCccEEeecCcccccCC Confidence 9999964322 2334678899999999999999999998643 2 2333322211111 No 106 >protein:vir:5249 Length: 437 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:117 # MgeName: Aaphi23 # Cross-refs: genbank:acc:NP_852754;genbank:gi:31544029;interpro:IPR006445;uniprot:Q7Y5U6;genbank:GeneID:2753529 Probab=99.92 E-value=3.3e-25 Score=154.77 Aligned_cols=372 Identities=12% Similarity=0.007 Sum_probs=218.1 Q ss_pred Ccc--hhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccc Q lcl|Aclame:pro 1 MIL--PILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKK 78 (392) Q Consensus 1 m~M--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~ 78 (392) |++ |+.|+..+...+...+..+..++... ....+. ..+.+++.+.++|+.+|+.+-+.++++...+ T Consensus 1 ~~~~D~~~~~~~~~g~~~~~~~~~~~~~~~~-----------~~~~l~-a~Y~~~~l~~~~vd~~a~d~~r~~~~i~~~d 68 (437) T protein:vir:52 1 MKFFDGIKSLALKLGSKQEQTYYSPSLSLTD-----------DLVQLE-ALWRDNWIANKVCIKRPEDMVRNWREIYSND 68 (437) T ss_pred CchhhhhHhHHhcCCCccccceeecCccccc-----------cHHHHH-HHHHhCchhhHHhhcchHHhhcCCceEecCC Confidence 222 33444332222222222222111111 111111 2345778899999999999999999885432 Q ss_pred cc-cccccCCccC---CHHHHHHHHHHHHHHhCCeeEEEeecc---------CCceEEEEEeccccceeeecCc------ Q lcl|Aclame:pro 79 NQ-GIIDNPSTNA---NKHGFWQSMFAQLLLGGEAFAYRWRNA---------NGADMKWEYLRPSQVNTYYFEY------ 139 (392) Q Consensus 79 ~~-~~~~~PN~~~---s~~~f~~~~~~~l~l~Gn~~~~i~r~~---------~G~~~~l~~l~~~~v~~~~~~~------ 139 (392) .+ .....-.... ...+-+...+.+.-++|.+|+++..+. .|.+..+.++++.+|++....+ T Consensus 69 ~~~~~~~~~~~~~~~l~~~~~l~~a~~~~rl~G~a~i~i~~d~~~~~~pl~~~~~~~~~~v~~~~~v~~~~~~~~dp~s~ 148 (437) T protein:vir:52 69 LNSKQLDLFTKFERSLKLRETLTKALQWSSLYGSVGLLVVTDSQNTSAPLKPTERLKRLIILPKWKISPTGTKDDDVLSP 148 (437) T ss_pred CCHHHHHHHHHHHHhhcHHHHHHHHHHhcccccceEEEEEecCCCcccccccCCceeEEEEechhhcccccccccccccc Confidence 11 1101111111 112233334444448999999998765 3788999999999998533322 Q ss_pred --cceEEEEEEecCcceeeeEEEeceeEEEecCCC---cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE Q lcl|Aclame:pro 140 --ENGMYYNITFDDPKIEPILQAPQSDLIHMKLLS---IDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVL 214 (392) Q Consensus 140 --~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~---~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il 214 (392) +...+|.+ . +++..+.+.++.|||+.+.. ......|.|.++.+...|.....+......++.+.... ++ T Consensus 149 ~fg~p~~y~v--~--~~~~~~~iH~SRii~~~~~~~~~~~~~~~G~s~le~~~~~i~~~~~~~~~~~~l~~~~~~~--v~ 222 (437) T protein:vir:52 149 NFGRYSEYSI--L--GGSQSITVHHSRLIILNANDAPLSDNDIWGVSDLEKIIDVLKRFDSASVNVGDLIFESKID--IF 222 (437) T ss_pred ccCcceEEEE--e--cCCcceeEccceeEEecCccCCCccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ce Confidence 23333333 2 22345689999999997532 34556799999999999999999999888887776544 34 Q ss_pred EeCC---CCCc-hHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcc Q lcl|Aclame:pro 215 TVKG---GGLL-SDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQG 290 (392) Q Consensus 215 ~~~~---~~~~-~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~ 290 (392) ++++ .... .++...++.+......+.+++++++.+.+|+.++.+..++ .+......++||++++||..+|.+.. T Consensus 223 k~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~e~~~~~~sgl--~~~l~~~~~~iaaa~~iP~t~L~G~s 300 (437) T protein:vir:52 223 KIAGLSDKIAAGMENEVASVISAVQEIKSATNSLLLDAENEYDRKELTFTGL--KDLLTEFRNAVAGAADMPVTILFGQS 300 (437) T ss_pred ecchHHHHhcCCcHHHHHHHHHHHHHhcCCCceEEEcCCcceEEEecCcCCH--HHHHHHHHHHHHHHhcCchhhhcCcC Confidence 5543 1111 1233333333343445567899999999999998887654 57778888999999999998775432 Q ss_pred cc--cchHHHHHHHHH-------HHHHHHHHHHHHHHHHHhh----hhhcccchhhhhcchHHH-------HHHHHHHHh Q lcl|Aclame:pro 291 DQ--QSSIQQISGMYA-------SALNRYLRPAISELEYKLS----DHISVNMRPAIDPLGDNY-------LSTISTATR 350 (392) Q Consensus 291 ~~--~~~~~~~~~~~~-------~~l~p~l~~i~~~l~~~l~----~~~~~d~~~~~~~~~~~~-------~~~~~~~~~ 350 (392) .+ ++..++.+.||. ..+.|.++.+.+.|-...+ +++.+.+..+...+.+++ ++.+..+++ T Consensus 301 ~~Glasge~D~~~yyd~i~~~Qe~~l~p~le~l~~~i~~~~~g~~~~~~~~~f~pL~~~s~kekae~~~~~a~a~~~~~~ 380 (437) T protein:vir:52 301 VSGLASGDEDIQNYHEAIRRLQETRLRPIFEIIDPLICNELFGGLPADWWFEFVPLTTVKQEQQINMLNTFATAANTLIQ 380 (437) T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceEEeCCcCCcCHHHHHHHHHHHHHHHHHHHh Confidence 32 223345555554 4556666655555544322 245555555555555544 446778899 Q ss_pred CCCcCHHHHHHHHHhCCCCc---c-ccccccCCCCC----------CCCCCCCCCC Q lcl|Aclame:pro 351 WGALAENQATFVLQEAGYIP---K-DLPAPENTNKK----------TTGQSNEPVP 392 (392) Q Consensus 351 ~g~~T~nE~R~~l~~~g~~~---~-e~~~~e~~~~~----------~~gd~~~p~p 392 (392) +|+++++|+|+.|...|.-+ . ++...++..+. ++.+.+.|.| T Consensus 381 ~g~i~~~e~r~~L~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (437) T protein:vir:52 381 NGVLNEYQIANELRESGLFANISAEHIEELKNADEFAGNFEEPEKMEGAQVQNSED 436 (437) T ss_pred cCCCCHHHHHHHHHhcCCCCCCCccccccccCCCCCCCccCCCCCCCCCCCCCCCC Confidence 99999999999998877532 1 22222221111 1111122222 No 107 >protein:vir:79647 Length: 435 # NCBI annotation: PorT # Family: family:all:297 # MgeID: mge:1872 # MgeName: TLS # Cross-refs: genbank:acc:YP_001285520;genbank:gi:148734503;genbank:GeneID:5220005 Probab=99.82 E-value=1.1e-20 Score=130.03 Aligned_cols=377 Identities=11% Similarity=0.040 Sum_probs=208.6 Q ss_pred chhhHhhcccccccccccccccccccchhhhhhhhcCCCCccc--chhhhhcchHHHHHHHHHHHhhhhCceeeeccccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWV--SARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~ 80 (392) ||+|-.-++..-. ...++.+.+. +........+........ ....+.+++.+.++|+.+|+.+-+..+++...+.. T Consensus 1 ~~~~m~~~~~~~~-~~D~~~~~~~-~~~g~~~~~~~~~~~~~~~~l~~~Y~~~~l~~~~Vd~~aed~~r~g~~i~g~~~~ 78 (435) T protein:vir:79 1 MGVFMSDKVKAIT-KEDGYNEIFG-SKDGTFRPNAFYMQRAAFKALSQFYEEDGMARRIVDVIPEEMVTPGFKVDGVKNE 78 (435) T ss_pred CCcccccccccch-hhcchhhhhc-ccccccccCcccCCcCCHHHHHHHHhcCchhhhhhccchHHhhcCCceecCCChH Confidence 9998544422211 1122222121 110001111111111111 11233578889999999999998888887654332 Q ss_pred cccc-cCCccCCHHHHHHHHHHHHHHhCCeeEEEee-c---------cCCceEEEEEeccccceeeecC-------ccce Q lcl|Aclame:pro 81 GIID-NPSTNANKHGFWQSMFAQLLLGGEAFAYRWR-N---------ANGADMKWEYLRPSQVNTYYFE-------YENG 142 (392) Q Consensus 81 ~~~~-~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r-~---------~~G~~~~l~~l~~~~v~~~~~~-------~~~~ 142 (392) ..+. .-....-... +...+....++|.+++++.- + ..|....+.++++.++++.... ++.. T Consensus 79 ~~~~~~~~~l~~~~~-l~~a~~~~rl~G~~~i~i~~~d~~~~~~Pl~~~g~i~~i~v~d~~~i~~~~~~~dp~sp~fg~P 157 (435) T protein:vir:79 79 KSFKSRWDELRLNAK-IIDALSWSRLFGGSAILAVVADNKMLKSPVKPGAQLEDIRVYDRYQITIHERETNARSVRYGEP 157 (435) T ss_pred HHHHHHHHHhhHHHH-HHHHHHhhhccccEEEEEEecCCCCcccccccCCceeeEEeechhhccchhhccCCcccccCcc Confidence 2211 1111112223 34444445578888877753 2 2356668889999888764321 2223 Q ss_pred EEEEEEecCcceeeeEEEeceeEEEecCCC------cccccccCCHH-HHHHHHHHHHHHHHHHHHHHHHcCCCcceEEE Q lcl|Aclame:pro 143 MYYNITFDDPKIEPILQAPQSDLIHMKLLS------IDGGKTGISPL-YSLRRESKIQRASDRLTISSLNSSLNVPGVLT 215 (392) Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~vih~~~~~------~~~~~~G~s~~-~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~ 215 (392) .+|.+ ....+.....+.++.|||+.+.. .....+|.|++ +.+...+.....+......++...... +++ T Consensus 158 ~~y~v--~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~e~~~~~l~~~~~~~~~~~~l~~~~~~~--v~~ 233 (435) T protein:vir:79 158 KLYKI--SPGGDIPEFFVHYSRICIIDGERVSNEKRRQNDGWGASILNKRLIEAIVDYNYCQELATQLLRRKQQA--VWK 233 (435) T ss_pred eEEEE--ecCCCCCceEEcceeEEEecCCcchhhhccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--ccc Confidence 33333 33333345679999999997532 33446699988 578898888888888888876554433 234 Q ss_pred eCC---CCC---chHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHc-CC Q lcl|Aclame:pro 216 VKG---GGL---LSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-GG 288 (392) Q Consensus 216 ~~~---~~~---~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~ 288 (392) +++ ... ......++.........+.+.+++.+++.+|+.++.+..+ +.+..+...++||++.|||...| |. T Consensus 234 ~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~i~~~~e~~e~~~~~lsg--l~~~~~~~~~~iaaa~~IP~t~L~G~ 311 (435) T protein:vir:79 234 ARDLALMCDDEEGRYAARLRLAQVDDESGVGKAIGIDATDEEYEVLNSDVSG--VPEFLQEKIDRIVALTGIHEIIIKNK 311 (435) T ss_pred chhHHHhhcCccchHHHHHHHHHHHHhcCCCCceeEecCCcceEEEecccCC--HHHHHHHHHHHHHhhhCCCeeeeccC Confidence 432 111 1122223333333334445556666666789999887764 46778888999999999999876 44 Q ss_pred cccc-cchH-HHHHHHHHHHHHH----HHHHHHHHHHHHh--hhhhcccchhhhhcchHHH-------HHHHHHHHhCCC Q lcl|Aclame:pro 289 QGDQ-QSSI-QQISGMYASALNR----YLRPAISELEYKL--SDHISVNMRPAIDPLGDNY-------LSTISTATRWGA 353 (392) Q Consensus 289 ~~~~-~~~~-~~~~~~~~~~l~p----~l~~i~~~l~~~l--~~~~~~d~~~~~~~~~~~~-------~~~~~~~~~~g~ 353 (392) +..+ +++. +..+.|| +.|+- .++++.+.|-..+ .+++.+.+.++..++.+++ ++.+..++++|+ T Consensus 312 s~~glnstgd~d~~~yy-d~i~~~Qe~~l~p~l~~l~~li~~s~d~~~~f~pL~~~sekEkAei~~~~a~a~~~~~~~g~ 390 (435) T protein:vir:79 312 NTGGVSASQNTALETFY-KLIDRKRVEDYKPILEFLLPFMISETEWSIEFEPLSVPSDKDKAEIMAKNVESVVKLKAEQA 390 (435) T ss_pred CccccccchhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC Confidence 3332 2333 3344443 33332 3444444443332 2455555666666666554 456778899999 Q ss_pred cCHHHHHHHHHh----CCCCccc---cccccCCCC--CCCCCCCC Q lcl|Aclame:pro 354 LAENQATFVLQE----AGYIPKD---LPAPENTNK--KTTGQSNE 389 (392) Q Consensus 354 ~T~nE~R~~l~~----~g~~~~e---~~~~e~~~~--~~~gd~~~ 389 (392) ++++|+|+.|.. .|+.+++ ++..++.+| ...|.+|+ T Consensus 391 i~~~e~r~~L~~~~~~~~~~~~~~~~~~~~~d~~~~~~~e~g~~~ 435 (435) T protein:vir:79 391 INLKETRDTLRSICPDLKIMDNDNIELPEPEDLDPEPGQEGGLNK 435 (435) T ss_pred CCHHHHHHHHHHhccccCCCCcccccCCccccCCCCCCCCCCCCC Confidence 999999998843 3444432 333333333 23344555 No 108 >protein:vir:107742 Length: 537 # NCBI annotation: gp28 # Family: family:all:297 # MgeID: mge:1520 # MgeName: BcepB1A # Cross-refs: genbank:acc:YP_024875;genbank:gi:48697517;genbank:GeneID:2948359 Probab=99.81 E-value=6.7e-20 Score=125.69 Aligned_cols=377 Identities=11% Similarity=-0.032 Sum_probs=199.1 Q ss_pred CcchhhHhhc------ccccc-cccccc----c-ccccccch--hhhhh-------------hhc--CCCCcccchhhhh Q lcl|Aclame:pro 1 MILPILNFIN------QTNDP-PEVGSV----Q-SYFPDGND--AQIME-------------SLL--GDNNEWVSARAAL 51 (392) Q Consensus 1 m~Mg~~~~~~------~~~~~-~~~~~~----~-~~~~~~~~--~~~~~-------------~~~--~~~~~~v~~~~a~ 51 (392) =.|-+..... ...++ +..... . ...-++.. ...+. ++. +..+..+. ..+. T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-a~Y~ 111 (537) T protein:vir:10 33 DEKPFTRAQLVHQTMMAIRDHAIAMMPKVDGSHPDMAMDGLDVEGGTFSAYANPNLSEGLVLWYAQQAFIGHQMC-ALIA 111 (537) T ss_pred hhhHHHHHHhhhhccCCCCCccCcccccccccccchhccccccchhhhhhhccccccchhhhhccccCCccHHHH-HHHH Confidence 0111111110 00000 000000 0 00000000 00000 000 00111111 1234 Q ss_pred cchHHHHHHHHHHHhhhhCceeeeccccc--------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEee---c---- Q lcl|Aclame:pro 52 RNSDLFSIILQLSSDLAIVKINAEKKKNQ--------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR---N---- 116 (392) Q Consensus 52 ~~~~v~~~i~~ia~~ia~~p~~~~~~~~~--------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r---~---- 116 (392) +++.+..+|+.+|+.+-+-++++.-.+.. .+...-+.......|.+.+.+.. ++|.+++++.- + T Consensus 112 ~~~l~r~iVd~~A~d~~r~~~~i~~~~~~~~~~~~~~~l~~~~~~l~~~~~l~~a~~~~r-lyG~~~i~i~v~~~D~~~~ 190 (537) T protein:vir:10 112 THWLVNKACSQMPRDAMRKGYKIISDDGNELDPKDAKFIDRYDRAFNIKKHAIQFVRKGR-IFGIRIALFKVDSPDPYYY 190 (537) T ss_pred hCchhhhhhhhhhHHhhcCCceeecCCcccccHHHHHHHHHHHHHhhHHHHHHHHHHhcc-cccceEEEEeecCcCCccc Confidence 68899999999999998888877543221 22223333344455544444444 57888887642 1 Q ss_pred ---------cCCceEEEEEeccccceeeecC----c------cceEEEEEEecCcceeeeEEEeceeEEEecCCCcc--- Q lcl|Aclame:pro 117 ---------ANGADMKWEYLRPSQVNTYYFE----Y------ENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSID--- 174 (392) Q Consensus 117 ---------~~G~~~~l~~l~~~~v~~~~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~--- 174 (392) ..|....+.+++|.++++.... + +...+| .+. ...+.++.|+|+.+.... T Consensus 191 ~~Pl~~~~i~kg~~k~l~vidp~~~~~~~~~~~~~dp~sp~fg~P~~y--~v~------g~~iH~SRli~f~g~~~p~~~ 262 (537) T protein:vir:10 191 EKPFNIDGVMPGAYKGIVQIDPYWCAPLLDAQASSNPVSMHFYEPTYW--LIN------GKKYHRSHLAIYINDEVVDFL 262 (537) T ss_pred ccccccccccccceeEEEEechhhcccccchhhhccCCccccCCceee--eec------CeEecceeEEEecCCCCchhh Confidence 1234567888898888763211 1 111222 222 136789999999765322 Q ss_pred ---cccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCC--CCCchHHHHHHHHHHHhccccCCceeeccC- Q lcl|Aclame:pro 175 ---GGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKG--GGLLSDKDKASRSRSFMKRSRSGGPVVLDD- 248 (392) Q Consensus 175 ---~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~- 248 (392) ....|.|.++.+...|.....+......++.+.... +++++. ....++...++.....+..+|. ++++++. T Consensus 263 ~~~~~~~G~Svlq~~~~~l~~~~~t~~~~~~l~~~~~~~--v~k~~~~~~l~~~~~~~~r~~~~~~~r~n~-g~~~id~e 339 (537) T protein:vir:10 263 KPSYIYGGVPLPQQIMERVYAAERTANEGPMLAMTKRQT--VLKVDAAQVLANKQQFDETMSWWTATRDNY-QVRVVDKD 339 (537) T ss_pred hcccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--eeeechHHhhcCHHHHHHHHHHHHhhcCCc-ceeEecCC Confidence 234699999999999999988888888887776655 344443 2333333333333333344444 4566665 Q ss_pred CceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHc-CCccccc-ch-HHHHHHHHH------HHHHHHHHHHHHHHH Q lcl|Aclame:pro 249 LEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGDQQ-SS-IQQISGMYA------SALNRYLRPAISELE 319 (392) Q Consensus 249 g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~~~-~~-~~~~~~~~~------~~l~p~l~~i~~~l~ 319 (392) +.+|+.++.+..++ .+......+.||++.|||...| |....+. ++ .+..+.|+. ..|.|.++.+.+.+. T Consensus 340 ~e~~e~~~~~lsgl--~~~l~~~~~~iAa~~~IP~t~L~G~sp~GlnatGe~D~~~yyd~I~~~Qe~l~p~l~~l~~ll~ 417 (537) T protein:vir:10 340 NEDVVQIDTTLNDL--DKVIMNQYQLVCAIARTPAPKMLGTVPTGFNSTGDYEEASYHEECESTQDDMRPLIDRHHQLVC 417 (537) T ss_pred CceeEEEeccCCCH--HHHHHHHHHHHHhhhCCCceeeccCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 68999988777654 5678888889999999999965 5432322 22 234444442 235566665555554 Q ss_pred HHh-hh--hhcccchhhhhcchHHHHH-------HHHHHHhCCCcCHHHHHHHHHhCC------CCccccccc------c Q lcl|Aclame:pro 320 YKL-SD--HISVNMRPAIDPLGDNYLS-------TISTATRWGALAENQATFVLQEAG------YIPKDLPAP------E 377 (392) Q Consensus 320 ~~l-~~--~~~~d~~~~~~~~~~~~~~-------~~~~~~~~g~~T~nE~R~~l~~~g------~~~~e~~~~------e 377 (392) +.. +. ++.+.+..+...+.+++++ .+..++++|+++++|+|+.|...+ +.+...... + T Consensus 418 ~~~~~~~~~~~i~f~pL~~~s~kEkAei~~~~a~a~~~~~~~G~i~~~Evr~~L~~~~~~g~~~l~~~~~~ed~e~~~~~ 497 (537) T protein:vir:10 418 RSHLRKRIRVKVEFPPMDAPKESERADTFLKKMQAAKLAFEMGAVDGVDVNEYLRMDPTLGFTSITPAMRPTDAEDIDVD 497 (537) T ss_pred HhcCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhccCccccccccCCCChhhhhcccCC Confidence 333 22 3344445556666666554 578889999999999999997643 222110000 1 Q ss_pred CCCCCCCCCCCCCCC Q lcl|Aclame:pro 378 NTNKKTTGQSNEPVP 392 (392) Q Consensus 378 ~~~~~~~gd~~~p~p 392 (392) ...+-.+++...|.| T Consensus 498 ~~~~~~~~~~~~~~~ 512 (537) T protein:vir:10 498 DEGKPVRIIEDQPAP 512 (537) T ss_pred ccCCcCCCCCCCCCc Confidence 111111222233333 No 109 >protein:vir:104338 Length: 422 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1593 # MgeName: RTP # Cross-refs: genbank:acc:YP_398967;genbank:gi:81343951;genbank:GeneID:3778870 Probab=99.79 E-value=1.8e-19 Score=123.31 Aligned_cols=366 Identities=14% Similarity=0.077 Sum_probs=198.9 Q ss_pred Ccc--hhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccc Q lcl|Aclame:pro 1 MIL--PILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKK 78 (392) Q Consensus 1 m~M--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~ 78 (392) |.- |+-|++..-..+. ..+......+...+ ...+.+++.+.++|+.+|+.+-+-.+++...+ T Consensus 1 ~~~~D~~~n~~~gg~~~~---------------~~~~~~~~~~~~~l-~a~Y~~~~l~~~~Vd~~aed~~r~g~~i~~~~ 64 (422) T protein:vir:10 1 MVKTDSYANIFLGGSDGS---------------EIYGSLQNQAPTIL-ASLYADNALVRRIIDTIPETALAAGFHIDGID 64 (422) T ss_pred CccchhhHHHHcCCCCCc---------------cccCcccccCHHHH-HHHHHhChhhHHHHhhhhHHHhcCCccccCCC Confidence 110 2222222111000 00000111111111 12345788899999999999988888776544 Q ss_pred ccc-ccccCCccCCHHHHHHHHHHHHHHhCCeeEEEee-c---------cCCceEEEEEeccccceeeecC-------cc Q lcl|Aclame:pro 79 NQG-IIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR-N---------ANGADMKWEYLRPSQVNTYYFE-------YE 140 (392) Q Consensus 79 ~~~-~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r-~---------~~G~~~~l~~l~~~~v~~~~~~-------~~ 140 (392) ... +..+-+.. ...+-+...+...-++|.+++++.- + ..|....+.++++.+|++.... ++ T Consensus 65 ~~~~~~~~~~~l-~~~~~l~~a~~~~rl~G~a~i~i~v~d~~~~~~Pl~~~g~~~~l~v~d~~~i~~~~~~~dp~s~~fg 143 (422) T protein:vir:10 65 DEPAFWSRWDDL-EMTQNINDAWSWARLFGGAAIVAIVKDNRALTSPVREGAELETVRVYDRTQVKVQTREENPRNARFG 143 (422) T ss_pred HHHHHHHHHHHh-hHHHHHHHHHHhhccccceEEEEEecCCCCccccccccCceeeEEeeccccccchhcccCccccccC Confidence 321 11111111 2223334445555578999888763 2 3466778999999988864321 23 Q ss_pred ceEEEEEEecCcceeeeEEEeceeEEEecCCC------cccccccCCHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcceE Q lcl|Aclame:pro 141 NGMYYNITFDDPKIEPILQAPQSDLIHMKLLS------IDGGKTGISPLYS-LRRESKIQRASDRLTISSLNSSLNVPGV 213 (392) Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~------~~~~~~G~s~~~~-~~~~i~~~~~~~~~~~~~~~ng~~~~~i 213 (392) ...+|.+. ....+....+.++.+||+.+.. .....+|.|++.. +...+.....+......++.+.... + T Consensus 144 ~P~~y~v~--~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~~~~~~~--v 219 (422) T protein:vir:10 144 EPLTYRIT--TNESDMFYDVHYSRIHIIDGERIPNVMRRQNDGWGRSVLSSDILDSIKDYTNCERLATQLLKRKQQA--V 219 (422) T ss_pred cceEEEEe--cCCCCcceeeccceeEEeCCCCchhhhcccCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc--c Confidence 33333332 3333445688999999996543 3344579999986 6788888888888888876665433 3 Q ss_pred EEeCC---C---CCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcC Q lcl|Aclame:pro 214 LTVKG---G---GLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIG 287 (392) Q Consensus 214 l~~~~---~---~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg 287 (392) +++++ . .....+.+++.........+.+.+++.+++.+|+.++.+..+ +.+......++||++.+||...|. T Consensus 220 ~~~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~e~~e~~~~~lsg--l~~~~~~~~~~iaaa~~IP~t~L~ 297 (422) T protein:vir:10 220 WKAKGLAELCDDSEGFGAARLRLAQVDNNSGVGQAIGIDAESEEYSVLNSDIGG--IDAFLDKKFDRIVALSGIHEIILK 297 (422) T ss_pred ccchhHHHhcCCccchHHHHHHHHHHHHhcCCccceeEecCCcceEEEecccCC--hHHHHHHHHHHHHhhhCCCeeeec Confidence 44443 1 111223333444444444555566666677899999988765 577788889999999999999774 Q ss_pred Cccccc--chH-HHHHHHHHHHHHH----HHHHHHHHHHHHh--hhhhcccchhhhhcchHHH-------HHHHHHHHhC Q lcl|Aclame:pro 288 GQGDQQ--SSI-QQISGMYASALNR----YLRPAISELEYKL--SDHISVNMRPAIDPLGDNY-------LSTISTATRW 351 (392) Q Consensus 288 ~~~~~~--~~~-~~~~~~~~~~l~p----~l~~i~~~l~~~l--~~~~~~d~~~~~~~~~~~~-------~~~~~~~~~~ 351 (392) +.+.+. ++. +..+.||. +|+- .++++.+.+-..+ ...+.+.+.++..++.+++ ++.+..++++ T Consensus 298 G~s~~Glnatgd~d~~~yyd-~i~~~Qe~~l~p~l~~l~~~i~~s~~~~~~f~pL~~~sekekaei~~~~a~a~~~~~~~ 376 (422) T protein:vir:10 298 NKNVGGVSSSQNTALETFHK-LVDRKRNAELLPILEFLIPFIVNAEEWSVEFNPLAQESSKDKAEILEKNVNSIAALIAA 376 (422) T ss_pred cCCcccccccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcccCCcEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhc Confidence 332322 222 33444433 2322 2333333332222 1234444445555555543 4567888999 Q ss_pred CCcCHHHHHHHHHhC----CCCccccccccCCCCCCCCCC--CCCCC Q lcl|Aclame:pro 352 GALAENQATFVLQEA----GYIPKDLPAPENTNKKTTGQS--NEPVP 392 (392) Q Consensus 352 g~~T~nE~R~~l~~~----g~~~~e~~~~e~~~~~~~gd~--~~p~p 392 (392) |+++++|+|+.|... |..++..+ +..+....++. ++|.. T Consensus 377 g~i~~~e~r~~L~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 421 (422) T protein:vir:10 377 GAMDIDEARDTLRTIAPEVKINDGSVE--TEVTISETSNDPLEVPTD 421 (422) T ss_pred CCCCHHHHHHHhhhhcccccCCCCCCc--cccchhhcCCCCCCCCCC Confidence 999999999998543 22221111 11111111111 11111 No 110 >protein:vir:99563 Length: 862 # NCBI annotation: minor head protein-like protein # Family: family:all:297 # MgeID: mge:1544 # MgeName: BcepF1 # Cross-refs: genbank:acc:YP_001039808;genbank:gi:126011058;genbank:GeneID:4818258 Probab=99.79 E-value=1.8e-19 Score=123.40 Aligned_cols=371 Identities=10% Similarity=-0.051 Sum_probs=199.1 Q ss_pred Ccc--------hhhHhhcccccccccccccccccccchhhhhhhhcC--CCCcccchhhhhcchHHHHHHHHHHHhhhhC Q lcl|Aclame:pro 1 MIL--------PILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLG--DNNEWVSARAALRNSDLFSIILQLSSDLAIV 70 (392) Q Consensus 1 m~M--------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~ 70 (392) |.| |+-+..-+....... .++... .....++.. ..+..+ ...+.+++.+..+|+.+|+.+-+- T Consensus 91 ~~~~~~~~~~Dgl~n~~~~lG~~~~~----s~y~~~--~~~~~~~~~~~f~gyql-~alY~~~~larkiVd~pAeDatR~ 163 (862) T protein:vir:99 91 AIKAITGFAMDDGGGAPVPIGAEGKQ----SSYAVP--EALQDWYLSQGFIGHQA-CALIAQHWLVDKACSLAGEDAIRN 163 (862) T ss_pred hhhhhhhhhhhcchhhhhhccccccc----cccccc--hhccccccccCcccHHH-HHHHHhCchhhhhhhhhhHHHhhC Confidence 222 222211111100000 000000 000111111 111111 123457889999999999999998 Q ss_pred ceeeeccccc---------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEee---c-------------cCCceEEEE Q lcl|Aclame:pro 71 KINAEKKKNQ---------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR---N-------------ANGADMKWE 125 (392) Q Consensus 71 p~~~~~~~~~---------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r---~-------------~~G~~~~l~ 125 (392) .+++.-.... .+...-....-...|. ..+...-++|.+++++.- + ..|.+..+. T Consensus 164 g~~I~~~~d~~e~~~e~~~~ie~~~~rL~v~~~l~-eair~~RLyGga~ililv~~~D~~~LsqPLn~e~I~kG~lkgl~ 242 (862) T protein:vir:99 164 GWHLKSLGEGEEIDEESLEKFKAIDVEFKVKENLI-EFNRFKNVFGIRVAIFVVDSEDPDYYEKPFNPDGITPGSYRGIS 242 (862) T ss_pred CceEeecCcccccCHHHHHHHHHHHHHhhHHHHHH-HHHHhcccccceEEEEEecCcCchhhhcCcCcccccccceeEEE Confidence 8888642110 1111111111123333 333333467777766531 2 124567888 Q ss_pred Eeccccceeee----cCc------cceEEEEEEecCcceeeeEEEeceeEEEecCCCccc------ccccCCHHHHHHHH Q lcl|Aclame:pro 126 YLRPSQVNTYY----FEY------ENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDG------GKTGISPLYSLRRE 189 (392) Q Consensus 126 ~l~~~~v~~~~----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~------~~~G~s~~~~~~~~ 189 (392) +++|.++++.. ..+ +...+| .+.+ ..+.++.|||+.+....+ .+.|+|.++.+... T Consensus 243 vlDp~w~~p~~v~~~~~Dp~sp~yGkP~~y--~I~g------~~IH~SRliif~g~~vpd~lk~ay~f~G~SvLe~iyd~ 314 (862) T protein:vir:99 243 QIDPYWMMPMLTAESTADPSSQFFYEPEFW--IISG------QKYHRSHLIIARGPQPADILKPTYIFGGIPLVQRIYER 314 (862) T ss_pred EechhhhcccccccccccccccccCCceee--eecC------eeeccceeEEecCCCchhhhhccCCccCccHHHHHHHH Confidence 89988877532 111 111112 2211 357888889887654322 23599999999999 Q ss_pred HHHHHHHHHHHHHHHHcCCCcceEEEeCCC--CCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHH Q lcl|Aclame:pro 190 SKIQRASDRLTISSLNSSLNVPGVLTVKGG--GLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQ 267 (392) Q Consensus 190 i~~~~~~~~~~~~~~~ng~~~~~il~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~ 267 (392) |.....+......++.+.... +++++.. ...++...++........+| .++++++.+-+|+.++.+..++ .+. T Consensus 315 L~~~d~t~~saa~Ll~ka~l~--v~ktd~l~~l~~ed~l~~r~~~~~~~rdN-~Gi~liD~eEe~e~ls~slSGL--~dl 389 (862) T protein:vir:99 315 VYAAERTANEAPLLAMNKRTT--AIHTDTAKAIANEDKFIQRLMFWVRYRDN-HAVKVLGTDETMEQFDTSLADF--DAV 389 (862) T ss_pred HHHHHHHHHHHHHHHHHhccc--eeechhHhhhccHHHHHHHHHHHHhccCc-ceeEEecCCCceeEEecccCCh--HHH Confidence 999999998888888876544 4455432 22233333333333333343 4588999999999998877644 567 Q ss_pred HHHHHHHHHHHhcccHHHc-CCccccc-ch-HHHHHHHHH-------HHHHHHHHHHHHHHHHHhh--hhhcccchhhhh Q lcl|Aclame:pro 268 TDWTSKQYAKVYGLPDSYI-GGQGDQQ-SS-IQQISGMYA-------SALNRYLRPAISELEYKLS--DHISVNMRPAID 335 (392) Q Consensus 268 ~~~~~~~Ia~~fgVP~~~l-g~~~~~~-~~-~~~~~~~~~-------~~l~p~l~~i~~~l~~~l~--~~~~~d~~~~~~ 335 (392) .....+.||++.+||...| |.+..+. ++ .+..+.||. ..|.|.++.+...+..++. +++.+.+..+.. T Consensus 390 l~~~~q~IAaas~IP~tiLfGqspaGlnATGE~D~~nYyD~I~s~QE~~L~P~LerL~~li~~~lg~~~d~~ieFnpL~~ 469 (862) T protein:vir:99 390 IMGQYQLVASIAKTPATKLLGTAPKGFNSTGEFETISYHEELESIQEHVYMPFLQRHYLISRLSLGIQHEIDVVMEPVAS 469 (862) T ss_pred HHHHHHHHHhhhCCCceeecccCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcceEEeCCCCC Confidence 7777889999999999955 5432332 22 334554443 3466666666666655553 345555556666 Q ss_pred cchHHHH-------HHHHHHHhCCCcCHHHHHHHHHhCC---CCcccccccc--------CCCC-CCCCCCCCCCC Q lcl|Aclame:pro 336 PLGDNYL-------STISTATRWGALAENQATFVLQEAG---YIPKDLPAPE--------NTNK-KTTGQSNEPVP 392 (392) Q Consensus 336 ~~~~~~~-------~~~~~~~~~g~~T~nE~R~~l~~~g---~~~~e~~~~e--------~~~~-~~~gd~~~p~p 392 (392) .+.++++ +.+..++.+|+++++|+|+.|...+ +...++...| +... ...|++..-.| T Consensus 470 ~sekEkAEi~kk~Aea~~~lv~sGvispdEvR~~L~~~~~~g~~~l~ded~E~d~~~~~e~~~~~e~~g~a~~~ap 545 (862) T protein:vir:99 470 MTAQQQADLNKTKAEGGKVLIDGGVISPDEERNRIRDDKRSGYNRLTKEDAEETPGASPENLAAYQKAGAAQETAS 545 (862) T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhcCCcCCCCCCcccccccCCCCcccccccccCCccccccc Confidence 6666654 4567889999999999999986544 2211111111 1110 00111111111 No 111 >protein:vir:107662 Length: 427 # NCBI annotation: putative portal protein # Family: family:all:297 # MgeID: mge:1518 # MgeName: T1 # Cross-refs: genbank:acc:YP_003893;genbank:gi:45686310;genbank:GeneID:2773002 Probab=99.79 E-value=1.3e-19 Score=124.11 Aligned_cols=363 Identities=12% Similarity=0.046 Sum_probs=201.4 Q ss_pred Ccc----hhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeec Q lcl|Aclame:pro 1 MIL----PILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEK 76 (392) Q Consensus 1 m~M----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~ 76 (392) |+| |+-|++....+.. . +..+....+..+. ..+.+++.+.++|+.+|+.+-+..+++.. T Consensus 1 ~~~~~~d~~~~~~~~~~~~~----~------------~~~~~~~~~~~l~-a~Y~~~~l~~~~Vd~~aed~~r~g~~i~g 63 (427) T protein:vir:10 1 MKIVKHDGYNDIFNGGADGS----P------------KPFFMSDASYHVG-SFYNDNATAKRIVDVIPEEMVTAGFKMSG 63 (427) T ss_pred CCccccchHHHHhhcCCCCc----c------------cCccccCchHHHH-HHHHcCchhhhhhccchHHhhcCCccccC Confidence 433 3334443211100 0 0111112222222 23457788999999999999988888765 Q ss_pred cccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEee----------ccCCceEEEEEeccccceeeecC-------c Q lcl|Aclame:pro 77 KKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR----------NANGADMKWEYLRPSQVNTYYFE-------Y 139 (392) Q Consensus 77 ~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r----------~~~G~~~~l~~l~~~~v~~~~~~-------~ 139 (392) .+....+..--......+-+...+...-++|.+++++.- ...|.+..+.++++..+++.... + T Consensus 64 ~~~~~~~~~~~~~l~~~~~l~~a~~~~rl~G~a~i~i~v~d~~~l~~p~~~~g~l~~l~v~d~~~~~~~~~~~dp~s~~f 143 (427) T protein:vir:10 64 VKDEKEFKSLWDSYKLDSSLVDLLCWARLYGGAAMVAIIKDNRMLTSQAKPGAKLEGVRVYDRFAITVEKRVTNARSPRY 143 (427) T ss_pred ccHHHHHHHHHHHhhHHHHHHHHHHhccccceeEEEEEecCCCccccccCCCcceeEEEEechhcccccccccCcccccc Confidence 432222111111112223344455555578999987742 24578899999999888774332 1 Q ss_pred cceEEEEEEecCcceeeeEEEeceeEEEecCCC------cccccccCCHHH-HHHHHHHHHHHHHHHHHHHHHcCCCcce Q lcl|Aclame:pro 140 ENGMYYNITFDDPKIEPILQAPQSDLIHMKLLS------IDGGKTGISPLY-SLRRESKIQRASDRLTISSLNSSLNVPG 212 (392) Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~------~~~~~~G~s~~~-~~~~~i~~~~~~~~~~~~~~~ng~~~~~ 212 (392) +...+|. +.+..+...+.+.++.++|+.+.. +....+|.|++. .+...+.....+......++...... T Consensus 144 g~P~~y~--v~~~~~~~~~~iH~SRli~~~g~~~p~~~~~~~~~~G~S~l~~~~~~~i~~~~~~~~~~~~l~~k~~~~-- 219 (427) T protein:vir:10 144 GEPEIYK--VSPGDNMQPYLIHHSRVFIADGERVAQQARKQNQGWGASVLNKSLIDAICDYDYCESLATQILRRKQQA-- 219 (427) T ss_pred CcceEEE--EecCCCCcceEEccccEEEecCCCchhhhcccCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHhccc-- Confidence 2333333 333334455789999999997543 233456999985 56787888888877777766654433 Q ss_pred EEEeCC------CCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHc Q lcl|Aclame:pro 213 VLTVKG------GGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI 286 (392) Q Consensus 213 il~~~~------~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l 286 (392) ++++++ ......+.+++.........+.+.+++..++-+|+.++.+..+ +.+......++||++.+||...| T Consensus 220 v~k~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~e~~e~~~~~lsg--l~~~~~~~~~~iaaa~~IP~t~L 297 (427) T protein:vir:10 220 VWKVKGLAEMCDDDDAQYAARLRLAQVDDNSGVGRAIGIDAETEEYDVLNSDISG--VPEFLSSKMDRIVSLSGIHEIII 297 (427) T ss_pred cccchhHHHHhcCccchHHHHHHHHHHHHhcCcccceeeecCCCceeEEecccCC--hHHHHHHHHHHHHhhhCCCeeee Confidence 344432 1111223333444433444556667777777899999887765 46778888899999999999977 Q ss_pred CCccc-cc-chH-HHHHHHHHHHHHH----HHHHHHHHHHHHhh--hhhcccchhhhhcchHHH-------HHHHHHHHh Q lcl|Aclame:pro 287 GGQGD-QQ-SSI-QQISGMYASALNR----YLRPAISELEYKLS--DHISVNMRPAIDPLGDNY-------LSTISTATR 350 (392) Q Consensus 287 g~~~~-~~-~~~-~~~~~~~~~~l~p----~l~~i~~~l~~~l~--~~~~~d~~~~~~~~~~~~-------~~~~~~~~~ 350 (392) -+.+. +- ++. +..+.||. .|+- .+++..+.|-..+. ..+.+.+.++...+.+++ ++.+..+++ T Consensus 298 ~G~sp~Glnstgd~D~~nyyd-~i~~~Qe~~l~p~l~~l~~~i~~s~~~~~~f~pL~~~s~kEkaei~~~~a~a~~~~~~ 376 (427) T protein:vir:10 298 KNKNVGGVSASQNTALETFYK-LVDRKREEDYRPLLEFLLPFIVDEEEWSIEFEPLSVPSKKEESEITKNNVESVTKAIT 376 (427) T ss_pred ccCCccccccchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCCcEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHh Confidence 43322 22 332 34444433 2332 23333333322221 234444444555555443 457788899 Q ss_pred CCCcCHHHHHHHHHhC----CCCccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 351 WGALAENQATFVLQEA----GYIPKDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 351 ~g~~T~nE~R~~l~~~----g~~~~e~~~~e~~~~~~~gd~~~p~p 392 (392) +|+++++|+|+.|... |..+.+....+. .+++.++.| T Consensus 377 ~gvi~~~e~r~~L~~~~~~~~~~~~~~~~~e~-----~~~~~e~~p 417 (427) T protein:vir:10 377 EQIIDLEEARDTLRSIAPEFKLKDGNNINIRE-----PEETTEPEP 417 (427) T ss_pred cCCCCHHHHHHHHHhhhccccCCCCccccccc-----cchhcCCCC Confidence 9999999999998543 333322111111 111111111 No 112 >protein:vir:96068 Length: 765 # NCBI annotation: conserved hypothetical protein ORF017 # Family: family:all:297 # MgeID: mge:1597 # MgeName: F8 # Cross-refs: genbank:acc:YP_001294434;genbank:gi:149408331;genbank:GeneID:5237187 Probab=99.75 E-value=4.2e-18 Score=115.87 Aligned_cols=380 Identities=11% Similarity=-0.008 Sum_probs=199.6 Q ss_pred Ccch-hhHhhcccccccccccc-cccccc------cch----hhhhhhhcC-------------------CCCcccchhh Q lcl|Aclame:pro 1 MILP-ILNFINQTNDPPEVGSV-QSYFPD------GND----AQIMESLLG-------------------DNNEWVSARA 49 (392) Q Consensus 1 m~Mg-~~~~~~~~~~~~~~~~~-~~~~~~------~~~----~~~~~~~~~-------------------~~~~~v~~~~ 49 (392) ++-| ++++......++..... ..+.+. +.. ...+....+ ..+..+. .. T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~gyql~-al 116 (765) T protein:vir:96 38 IKLGKIRGWNVEPEKAPVIRSVKDFLEPGLSVAMDSAYGDGPTPAAKAAAGGQNPYVVPTMLQDWYNSQGFIGYQAC-AI 116 (765) T ss_pred hhHHHHhhcccccccCCCCCCCCcccCcccceeccccccccccchHHHhhhccCccchhhHHHhhhcccCCccHHHH-HH Confidence 3333 34444333322211111 111111 000 000111110 0011111 12 Q ss_pred hhcchHHHHHHHHHHHhhhhCceeeecccccc------ccccCCccCCHHHHHHHHHHHHHHhCCeeEEEee---c---- Q lcl|Aclame:pro 50 ALRNSDLFSIILQLSSDLAIVKINAEKKKNQG------IIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR---N---- 116 (392) Q Consensus 50 a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~------~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r---~---- 116 (392) +.+++.+..+|+.+|+++-+-.+++.-..... .+.+--......+-+...+...-++|.+|+++.- + T Consensus 117 Y~~~~l~rkiVd~pAeDa~R~g~~I~~~~~e~~~~~~~~l~~~~~rl~v~~~l~ea~~~~RlyGga~i~i~i~~~D~~~l 196 (765) T protein:vir:96 117 ISQHWLVDKACSMSGEDAARNGWELKSDGRKLSDEQSALIARRDMEFRVKDNLVELNRFKNVFGVRIALFVVESDDPDYY 196 (765) T ss_pred HHhCchhhhhhhcchHHhhcCCceeecCccccCHHHHHHHHHHHHHhhHHHHHHHHHHHhhhceeeEEEEEecccCcchh Confidence 45788899999999999987777764322110 1110000111233344455555578888877642 1 Q ss_pred ---------cCCceEEEEEeccccceeeec----Cc-cceEEE---EEEecCcceeeeEEEeceeEEEecCCCc------ Q lcl|Aclame:pro 117 ---------ANGADMKWEYLRPSQVNTYYF----EY-ENGMYY---NITFDDPKIEPILQAPQSDLIHMKLLSI------ 173 (392) Q Consensus 117 ---------~~G~~~~l~~l~~~~v~~~~~----~~-~~~~~~---~~~~~~~~~~~~~~~~~~~vih~~~~~~------ 173 (392) ..|....|..++|.++.+... .+ ...-|+ .|.+. ...+.++.|||+.+... T Consensus 197 ~~PL~~~~I~kg~~kgl~vldp~~~~~~~v~e~~~Dp~sp~fg~P~~y~i~------g~~IH~SRli~~~g~~lpd~lk~ 270 (765) T protein:vir:96 197 EKPFNPDGIAPGSYKGISQIDPYWAMPQLTAESTADPSAEHFYEPDFWIIS------GKKYHRSHLVVVRGPQPPDILKP 270 (765) T ss_pred hccccccccccceeeEEEEechhhcccccchhccccccccccCcceeeeec------CceeccceEEEecCCCchhhhcc Confidence 123556778888877765321 11 111111 11222 12578889999976542 Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCC--CCCchHHHHHHHHHHHhccccCCceeeccCCce Q lcl|Aclame:pro 174 DGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKG--GGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEE 251 (392) Q Consensus 174 ~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~ 251 (392) ....+|.|.++.+...|.....+......++.+.... +++++. ....++...++.....+..+ ..++++++.+-+ T Consensus 271 ~~~~~G~Svlq~~yd~I~~~~~t~~~~a~Ll~k~~~~--v~k~~~~~~l~~~~~l~~r~~~~~~~r~-n~g~~~id~ee~ 347 (765) T protein:vir:96 271 TYIFGGIPLTQRIYERVYAAERTANEAPLLAMSKRTS--TIHVDVEKAIANEDAFNARLAFWIANRD-NHGVKVIGIDET 347 (765) T ss_pred ccCccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccc--eeeechHhhhccHHHHHHHHHHHHHhcC-CceeEEecCCcc Confidence 1234699999999999999998888888887776544 344443 22333444433333333333 346788999999 Q ss_pred EeecccChhhHHHHHHHHHHHHHHHHHhcccHHHc-CCccccc-ch-HHHHHHHHH-------HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 252 FTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGDQQ-SS-IQQISGMYA-------SALNRYLRPAISELEYK 321 (392) Q Consensus 252 ~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~~~-~~-~~~~~~~~~-------~~l~p~l~~i~~~l~~~ 321 (392) |+.++.+..+ +.+......+.||++.+||...| |....+. ++ .+..+.||. ..+.|.++.+.+.|-.. T Consensus 348 ~e~~s~~lsg--l~d~l~~~~~~iAaas~IP~t~LfGqsp~GlnATGe~D~~nYyD~I~s~Qe~~l~p~le~L~~li~~s 425 (765) T protein:vir:96 348 MEQFDTNLSD--FDSVIMNQYQLVAAIAKTPATKLLGTSPKGFNATGEHETISYHEELESIQEHIFDPLLERHYLLLAKS 425 (765) T ss_pred eeEEecccCC--HHHHHHHHHHHHHhhhCCCeeeeccCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 9999988765 46778888899999999999866 4332332 23 334554443 33444444444444322 Q ss_pred --hhhhhcccchhhhhcchHHHH-------HHHHHHHhCCCcCHHHHHHHHHhCC---CCc--ccccc-ccCCCCCC--- Q lcl|Aclame:pro 322 --LSDHISVNMRPAIDPLGDNYL-------STISTATRWGALAENQATFVLQEAG---YIP--KDLPA-PENTNKKT--- 383 (392) Q Consensus 322 --l~~~~~~d~~~~~~~~~~~~~-------~~~~~~~~~g~~T~nE~R~~l~~~g---~~~--~e~~~-~e~~~~~~--- 383 (392) +.+++.+.+..+...+.++++ +.+..++.+|+++++|+|+.|...+ +.. ++... .....|.. T Consensus 426 ~~i~~d~~i~FnpL~~~sekEkAei~~k~Aea~~~~~~~Gvis~dEvR~~L~~~~~~g~~~l~d~~~e~~~~~~pe~~~~ 505 (765) T protein:vir:96 426 ESIDVQLEIVWNPVDSTTSQQQAELNNKKAATDEIYINSGVVSPDEVRERLRDDPRSGYNRLTDDQAETEPGMSPENLAE 505 (765) T ss_pred cCCCCcceEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccccCCCCCCCccccccccCCCcccccc Confidence 123455555566656666554 4577889999999999999997544 221 11111 00111100 Q ss_pred -------------CCCCCCCCC Q lcl|Aclame:pro 384 -------------TGQSNEPVP 392 (392) Q Consensus 384 -------------~gd~~~p~p 392 (392) .+..+.+.| T Consensus 506 ~~~~~~~~~~~~~e~~~~~a~p 527 (765) T protein:vir:96 506 LEKAGAQSAKAKGEAERAEAQA 527 (765) T ss_pred ccCCCcccccccCccccccCCC Confidence 011111222 No 113 >protein:vir:94049 Length: 532 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1493 # MgeName: OP2 # Cross-refs: genbank:acc:YP_453629;genbank:gi:84662665;genbank:GeneID:5142559 Probab=99.74 E-value=3.5e-18 Score=116.27 Aligned_cols=378 Identities=12% Similarity=0.008 Sum_probs=193.7 Q ss_pred CcchhhHhhcccc-cccccccccccc----cccchh---hhhhhh--cCCCCcccchhhhhcchHHHHHHHHHHHhhhhC Q lcl|Aclame:pro 1 MILPILNFINQTN-DPPEVGSVQSYF----PDGNDA---QIMESL--LGDNNEWVSARAALRNSDLFSIILQLSSDLAIV 70 (392) Q Consensus 1 m~Mg~~~~~~~~~-~~~~~~~~~~~~----~~~~~~---~~~~~~--~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~ 70 (392) +.|----.+.... .+.......+-+ ..+... ....++ ....+..+. ..+.+++.+..+|+.+|+.+-+- T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~l~-a~Y~~~~l~r~~Vd~~aed~~r~ 111 (532) T protein:vir:94 33 LGLATAHEIDPTAYSPYERNAAQNAMAMDYGLQTGRNGRNALSFVEATSWPGFPTL-ALLAQLPEYRTMHETPADECVRA 111 (532) T ss_pred hhhhhhhhhcccccccccccccccccccccccCcccccccccccccccccchHHHH-HHHHcCchhhhhhccchHHHhhC Confidence 1110000000000 000000000000 000000 000010 011111111 23346888999999999999888 Q ss_pred ceeeeccccc--------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeec-------------------cCCceEE Q lcl|Aclame:pro 71 KINAEKKKNQ--------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRN-------------------ANGADMK 123 (392) Q Consensus 71 p~~~~~~~~~--------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~-------------------~~G~~~~ 123 (392) .+++...... .+...-.... ..+-+...+...-++|.+++++.-. ..|.+.. T Consensus 112 ~~~i~~~~~~~~~~~~~~~i~~~~~~l~-v~~~l~~a~~~~rlyG~a~i~i~v~~~~~~~~~~~p~~l~~~~I~~g~~~~ 190 (532) T protein:vir:94 112 WGKITCSSKDELAADKATRITQKLEQYN-VRTLVRTVVIHDQAYGGAHVFPHLKMDGDSVPADAPLLLSPSFVQRGCLIG 190 (532) T ss_pred CceEeeCCccccchHHHHHHHHHHHhhh-HHHHHHHHHHhhhcccceEEEEEeccCCccccccccccccccccccceeeE Confidence 8877542211 1111111111 2223334444445789898876432 2344578 Q ss_pred EEEeccccceeeecCccc--------eEEEEEEecCcceeeeEEEeceeEEEecCCCccc------ccccCCHHHHHHHH Q lcl|Aclame:pro 124 WEYLRPSQVNTYYFEYEN--------GMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDG------GKTGISPLYSLRRE 189 (392) Q Consensus 124 l~~l~~~~v~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~------~~~G~s~~~~~~~~ 189 (392) +.+++|.+|++....... ..+|. ... ...+.++.|+|+.+..... ..+|.|.++.+... T Consensus 191 l~vld~~~v~p~~~~~~dp~sp~fg~P~~y~--v~~-----g~~iH~SRli~f~g~~~p~~~~~~~~~~G~Svlq~~~~~ 263 (532) T protein:vir:94 191 FATIEPMWLSPNAYNATDPTLPSFYKPDSWI--ATS-----GKKIHSSRIHTVVGRPVGDMLKAAYSFRGVSISQLAMPY 263 (532) T ss_pred EEeechheecccccccccccccccCCceeEE--Ecc-----CeeeccceEEEecCCCchhhhccccccccccHHHHHHHH Confidence 999999998875322111 11221 111 1368899999997654322 23699999999999 Q ss_pred HHHHHHHHHHHHHHHHcCCCcceEEEeC--CCCCch--HHHHHHHHHHHhccccCCceeeccC-CceEeecccChhhHHH Q lcl|Aclame:pro 190 SKIQRASDRLTISSLNSSLNVPGVLTVK--GGGLLS--DKDKASRSRSFMKRSRSGGPVVLDD-LEEFTALEIKSNVAQL 264 (392) Q Consensus 190 i~~~~~~~~~~~~~~~ng~~~~~il~~~--~~~~~~--~~~~~~~~~~~~~~~~~g~~~vl~~-g~~~~~l~~~~~d~~~ 264 (392) |.....+......+....... ++++. +..... ++..+++.......+| .++++++. ..+|+.++.+..+ + T Consensus 264 l~~~~~t~~~~~~l~~~~~~~--v~k~~~a~~ls~~~~~~~~~r~~~~~~~~~n-~g~~~id~~~e~~e~~~~~lsg--l 338 (532) T protein:vir:94 264 VDNWLRTRQSVSDTVKQFSMT--NLATDMAQLLAPGGAQSLDARLQLFNLYRDN-RNIGALDKGTEEIQQTNTPLSG--L 338 (532) T ss_pred HHHHHHHHHHHHHHHHhcCCc--eeeechHHhhcchhHHHHHHHHHHHHhhcCC-ccceEEcCCCceeEEEecccCC--H Confidence 999988888888766654433 23432 111111 2223333332333344 34566664 5789998877765 4 Q ss_pred HHHHHHHHHHHHHHhcccHHHc-CCccccc-ch-HHHHHHHHH-------HHHHHHHHHHHHHHHHHhh----hhhcccc Q lcl|Aclame:pro 265 LSQTDWTSKQYAKVYGLPDSYI-GGQGDQQ-SS-IQQISGMYA-------SALNRYLRPAISELEYKLS----DHISVNM 330 (392) Q Consensus 265 ~e~~~~~~~~Ia~~fgVP~~~l-g~~~~~~-~~-~~~~~~~~~-------~~l~p~l~~i~~~l~~~l~----~~~~~d~ 330 (392) .+..+...+.||++.|||..+| |....+- ++ .+..+.|+. ..+.|.++.+.+.|.+..+ +++.|.+ T Consensus 339 ~~~l~~~~~~iAaa~~IP~t~LfG~sp~GlnstGe~D~~~yyd~I~s~Qe~~l~p~le~l~~~l~~s~~g~~~~d~~~~f 418 (532) T protein:vir:94 339 DSLQAQSQEQMAAVSHIPLVKLLGITPNGLNASSDGEIRVWYDFIAGYQATNLTPLMEWIIDLIQLSEYGQIDPGLAWEW 418 (532) T ss_pred HHHHHHHHHHHHhHhCCCeeeeecCCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceEEe Confidence 6678888899999999999966 5432222 22 224444433 3355555555555544322 3455555 Q ss_pred hhhhhcchHHHH-------HHHHHHHhCCCcCHHHHHHHHHhCCCCcc--cccc------c---------cCCCCCCCC- Q lcl|Aclame:pro 331 RPAIDPLGDNYL-------STISTATRWGALAENQATFVLQEAGYIPK--DLPA------P---------ENTNKKTTG- 385 (392) Q Consensus 331 ~~~~~~~~~~~~-------~~~~~~~~~g~~T~nE~R~~l~~~g~~~~--e~~~------~---------e~~~~~~~g- 385 (392) ..+...+.++++ +.+..++.+|+++++|+|+.|+..+..+. +++. . ++.++..++ T Consensus 419 ~pL~~~s~kEkAei~~~~a~a~~~~~~~Gvi~~~Evr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (532) T protein:vir:94 419 SPLMELDDKELAEVRQLNASTDSTLMELGVIDAKMVQQRLAADPTSGYAGALGERDELDDVEEIAKQLMAAALNPPATAP 498 (532) T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcCCccccccccccccccccccchhhhhcccccCCCCCCC Confidence 555556666543 45678899999999999999976553210 0110 0 011111111 Q ss_pred CCCCCCC Q lcl|Aclame:pro 386 QSNEPVP 392 (392) Q Consensus 386 d~~~p~p 392 (392) ....|.| T Consensus 499 ~~~~~~~ 505 (532) T protein:vir:94 499 QTPNPQP 505 (532) T ss_pred CCCCCCC Confidence 1122333 No 114 >protein:vir:79538 Length: 502 # NCBI annotation: putative portal protein # Family: family:all:47 # MgeID: mge:1871 # MgeName: cdtI # Cross-refs: genbank:acc:YP_001272517;genbank:gi:148609386;genbank:GeneID:5204374 Probab=99.73 E-value=1.7e-17 Score=112.47 Aligned_cols=389 Identities=12% Similarity=0.055 Sum_probs=212.2 Q ss_pred chhhHhhcccccccccc-------cccccccccchhhhhhhhcCC--CCccc----------chhhhhcchHHHHHHHHH Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVG-------SVQSYFPDGNDAQIMESLLGD--NNEWV----------SARAALRNSDLFSIILQL 63 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~~v----------~~~~a~~~~~v~~~i~~i 63 (392) |+|++..-....|.... ..+.+.. ........|+... ....+ +.+-+..+|.+.+||+.+ T Consensus 1 mn~~dr~i~~~sP~~~~~R~~ar~~~~~y~a-a~~~r~~~~~~~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~ 79 (502) T protein:vir:79 1 MAILDDVIGVFSPGWKAARLRSRAVIQAYEA-VKTTRTHKARRENRTADQLSQYGAVSLREQARYLDNNHDLVIGVFDKL 79 (502) T ss_pred CchHhhHHhhcChHHHHHHHhhHHHHhhccc-cCcccccCCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH Confidence 99998554443321110 0000000 0000111111111 01111 122334568889999977 Q ss_pred HHhh-hhCceeeec----cc--------------ccccccc--CCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC---- Q lcl|Aclame:pro 64 SSDL-AIVKINAEK----KK--------------NQGIIDN--PSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN---- 118 (392) Q Consensus 64 a~~i-a~~p~~~~~----~~--------------~~~~~~~--PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~---- 118 (392) .+.+ ++--+.+.- .. ...+..+ .+..++.+++.+.++..++..|++|+.+.+... T Consensus 80 ~~nvVG~ggi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~~~~~ 159 (502) T protein:vir:79 80 EERVVGKNGIIVEPHPVLRNGAIARDLAAEIRTRWSEWSVSPEVTGQFTRPMLERLMLRTWLRDGEVFAQMVSGRINSLT 159 (502) T ss_pred HHhhccCCceeeeeccCCCChhHHHHHHHHHHHHHHHhhcCcCccccCCHHHHHHHHHHHHHhCCceEEEEeecccCccC Confidence 6665 432222111 00 1112222 344688999999999999999999998865432 Q ss_pred ---CceEEEEEecccccee------------eecCccceEEEEEEecC---cceeeeEEEeceeEEEecCCCcccccccC Q lcl|Aclame:pro 119 ---GADMKWEYLRPSQVNT------------YYFEYENGMYYNITFDD---PKIEPILQAPQSDLIHMKLLSIDGGKTGI 180 (392) Q Consensus 119 ---G~~~~l~~l~~~~v~~------------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~vih~~~~~~~~~~~G~ 180 (392) +.+..|..|+|+.+.. ..++.|..+.|...... ........+++++|+|+......+...|+ T Consensus 160 ~g~~~~l~lq~iepd~l~~~~~~~~~i~~GVe~d~~Gr~~aY~i~~~hPgd~~~~~~~rvpA~~vlH~f~~~r~gQ~RGi 239 (502) T protein:vir:79 160 PSAGVHFWLEALEPDFIPMTSDESNRLNQGVFVDDWGRPEKYLVYKSRPVSGRQMETKEVDAERMLHLKFVRRLHQMRGT 239 (502) T ss_pred CCcccceEEEEecchhcCCCCCCCCeeEeeeEECCCCceEEEEEeecCCCCCcccceeEechhheEEeecccCCccccCC Confidence 3468899999988863 34455555555544322 12234567999999999988888889999 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCcee-eccCCceEeecccCh Q lcl|Aclame:pro 181 SPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPV-VLDDLEEFTALEIKS 259 (392) Q Consensus 181 s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vl~~g~~~~~l~~~~ 259 (392) |.+..+...+.-.....+....-.+=.+...++++.+.+..........-.....-.-..|.++ .|..|.+++..+.+. T Consensus 240 s~lapvl~~l~~l~~~~dael~~a~i~A~~~~fi~~~~~~~~~~~~~~~~~~~~~~~l~pG~i~~~L~pGe~i~~~~p~~ 319 (502) T protein:vir:79 240 SLLSGVLIRLSALKEYEDSELTAARIAAALGMYIRKGDGQSYEPDGNGSKENERELTIQPGIIYDDLKPGEEIGMVKSDR 319 (502) T ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCcccccccCCCCCccccccccCCccccccCCCceeeeeCCCC Confidence 9999998877766666655555555555667777765432111100000000000111245554 589999999988776 Q ss_pred hhHHHHHHHHHHHHHHHHHhcccHHHcCCccc-ccchH-HHHHHH-------HHHHHHHHHHHHHHHH-HHHhh-hhhcc Q lcl|Aclame:pro 260 NVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGD-QQSSI-QQISGM-------YASALNRYLRPAISEL-EYKLS-DHISV 328 (392) Q Consensus 260 ~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~-~~~~~-~~~~~~-------~~~~l~p~l~~i~~~l-~~~l~-~~~~~ 328 (392) ....|.+..+...+.||+.+|||.+.|-+..+ ++++. .....+ -..++..+++||-+.+ +..+. ..+.+ T Consensus 320 p~~~~~~f~~~~lr~iaaglGi~ye~lt~D~s~nySs~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~~l~~a~l~G~i~~ 399 (502) T protein:vir:79 320 PNPNLETFRNGQLRAVAAGSRLSFSSTARNYNGTYSAQRQELVESTDGYLILQDWFIGAVTRPMYRAWLKQAVASGVIRL 399 (502) T ss_pred CCCCHHHHHHHHHHHHHhhcCCCHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC Confidence 66788999999999999999999998854322 22221 111111 1223444666655543 32222 11111 Q ss_pred ----cchhhhh----------cchHHHHHHHHHHHhCCCcCHHHHHHHH------------------HhCCCCccccccc Q lcl|Aclame:pro 329 ----NMRPAID----------PLGDNYLSTISTATRWGALAENQATFVL------------------QEAGYIPKDLPAP 376 (392) Q Consensus 329 ----d~~~~~~----------~~~~~~~~~~~~~~~~g~~T~nE~R~~l------------------~~~g~~~~e~~~~ 376 (392) +.....+ .|..........++++|++|+-|+-+.. .+.|+..+..+.. T Consensus 400 p~~~~~~~~~~~~W~~p~~~~iDP~Ke~~a~~~~i~~Gl~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~~~ 479 (502) T protein:vir:79 400 PRDLDRSSLYTAVYSGPVMPWIDPVKEAEAWKIQIRGGAATESDWVRAGGRNPDDVKRRRKAEIDENRKLDLVFDTDPAS 479 (502) T ss_pred CCCCCchhhcceeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCCCCCCCC Confidence 1111111 2555566677889999999998765432 1233322222222 Q ss_pred cCCCCCCCCCCCCCCC Q lcl|Aclame:pro 377 ENTNKKTTGQSNEPVP 392 (392) Q Consensus 377 e~~~~~~~gd~~~p~p 392 (392) ...+....+++.+|.| T Consensus 480 ~~~~~~~~~~~~e~~~ 495 (502) T protein:vir:79 480 DKGGSSAATKRQEPQH 495 (502) T ss_pred CCCCCCCCCCCCCCCC Confidence 2222233344444555 No 115 >protein:vir:80040 Length: 461 # NCBI annotation: gp3 # Family: family:all:297 # MgeID: mge:1876 # MgeName: B054 # Cross-refs: genbank:acc:YP_001468707;genbank:gi:157325287;genbank:GeneID:5601731 Probab=99.73 E-value=3.7e-18 Score=116.13 Aligned_cols=375 Identities=14% Similarity=0.105 Sum_probs=200.2 Q ss_pred chhhHhhcccccccccccccccccc---cc--hhhhhhhhcCCCCcccch----hhhhcchHHHHHHHHHHHhhhhCcee Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPD---GN--DAQIMESLLGDNNEWVSA----RAALRNSDLFSIILQLSSDLAIVKIN 73 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~v~~----~~a~~~~~v~~~i~~ia~~ia~~p~~ 73 (392) |+=.|-=+...-..++..+...+.. +. +...+.++.. ...++. ..+.+++.+..+|+.+|+.+-+-.++ T Consensus 1 ~~~~~~a~~~~~~~~a~~~~~~~~~~g~~~~~d~~~~~~~~~--~~~~~~~~l~~lY~~~~l~r~iVd~~a~d~~r~g~~ 78 (461) T protein:vir:80 1 MYSIDKAKQAKIDSKIVNRNDFMVGHGKANSRDKLTRQTPGN--GQKLDLKACENLYASNSIAMNIVDIISEDMVRAGWS 78 (461) T ss_pred CccchhhhhhhhhhhhhhhhHHHhhcCCcchhhhhhccccCc--ccccCHHHHHHHHHhCCccchhhccchHHhhcCCee Confidence 3322211100000111111111100 01 1111111111 111222 23346788899999999999887776 Q ss_pred eeccccc---cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEee-ccC------------C---ceEEEEEecccccee Q lcl|Aclame:pro 74 AEKKKNQ---GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR-NAN------------G---ADMKWEYLRPSQVNT 134 (392) Q Consensus 74 ~~~~~~~---~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r-~~~------------G---~~~~l~~l~~~~v~~ 134 (392) +...+.. .+...-+....+.. +...+.+..++|.+|+++.- +.+ + ....|.|+.+..+.+ T Consensus 79 i~~~~~~~~~~~~~~~~~l~~~~~-l~~~~~~~rl~G~a~i~i~v~d~~~~~~~~~~pl~~~~~~~~~~l~~~~~~~i~~ 157 (461) T protein:vir:80 79 LKTDNKEMKKNIESKWRKLKTKDR-FQKLYADKRLYGDGFLSIGVVSSNREQADLSTAIDPKTIKSIPYINTFNTQKVTQ 157 (461) T ss_pred eecCCHHHHHHHHHHHHHhhHHHH-HHHHHHhhcccccEEEEEEeecCCccccCccCCcccccccceeEEEeccccccch Confidence 6543321 11111111122333 44455556689999988742 211 1 222333433333332 Q ss_pred eec-------CccceEEEEEEe---------cCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 135 YYF-------EYENGMYYNITF---------DDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDR 198 (392) Q Consensus 135 ~~~-------~~~~~~~~~~~~---------~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~ 198 (392) ... .++...+|.+.. .+..+.....+.++.|+|+.+....+..+|.|.++.+...+.....+.. T Consensus 158 ~~~~~dp~sp~fg~P~~y~i~~~~~~~~~~~~~~~~~~~~~iH~SRii~~~~~~~~~~~~G~S~le~~~~~l~~~~~~~~ 237 (461) T protein:vir:80 158 LYLNQDMFSEHFGEVEFFEVNRVSQLGEEILSGTTASTSEQIHRSRIIHEQGLRFEGETKGRSIFESLYDIITVMDTSLW 237 (461) T ss_pred hhhcccCcCcccccceEEEEeccccccccccccccCccceEEccccEEEecCCCCCccccCcchHHHHHHHHHHHHHHHH Confidence 111 123333333321 1122344578999999999998877778899999999999999999988 Q ss_pred HHHHHHHcCCCcceEEEeCCCC--Cch-HHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHH Q lcl|Aclame:pro 199 LTISSLNSSLNVPGVLTVKGGG--LLS-DKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQY 275 (392) Q Consensus 199 ~~~~~~~ng~~~~~il~~~~~~--~~~-~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~I 275 (392) ....+..+...+ +++++... ... .....++.+.+ .+..++++++.+-+|+.++.+..+ +.+..+.....| T Consensus 238 ~~~~l~~~~~~~--v~k~~~l~~~~~~~~~~~~~~~~~~---~~~~g~~~~d~~e~~e~~~~~lsg--l~~~l~~~~~~i 310 (461) T protein:vir:80 238 SVGQILYDFAFK--VYKTDDIDALNKDDKANLTAMLDFM---FRTEALAIIKGDEQLTKESTNVSG--MKDLLDYGWDYL 310 (461) T ss_pred HHHHHHHHhCCC--ceecchHHhhhchHHHHHHHHHHHh---cCCceEEEEcCCcceEEEecCcCC--HHHHHHHHHHHH Confidence 888887775544 45555311 111 11122222222 233457888988899999987765 467888899999 Q ss_pred HHHhcccHHHcCCcccc-cch-HHHHHHHHH-------HHHHHHHHHHHHHHHHHhhh----------hhcccchhhhhc Q lcl|Aclame:pro 276 AKVYGLPDSYIGGQGDQ-QSS-IQQISGMYA-------SALNRYLRPAISELEYKLSD----------HISVNMRPAIDP 336 (392) Q Consensus 276 a~~fgVP~~~lg~~~~~-~~~-~~~~~~~~~-------~~l~p~l~~i~~~l~~~l~~----------~~~~d~~~~~~~ 336 (392) |++-+||...|.+...+ .++ .+..+.|+. ..+.|.++.+.+.+-+..+. .+.+.+..+... T Consensus 311 aa~s~iP~t~L~G~s~g~~asge~D~~~yyd~i~~~qe~~l~p~le~l~~~i~~s~~~~~~~~~p~~~~~~i~f~~L~~~ 390 (461) T protein:vir:80 311 AGAVRMPKTVLKGQEAGTLTGAQYDVMNYYARVSSIQENRLRPQLEYLTRLLMWASDDCGPSIDPDSFEWAIEFNPLWNL 390 (461) T ss_pred hhhhcCCeeeeecccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCccccceEEEeCCCCCC Confidence 99999999877443333 233 234444432 34555555555555443221 234444555555 Q ss_pred chHHHH-------HHHHHHHhCCCcCHHHHHHHHH-hCCCCcc-----ccccccCCCC-------CCCCCC Q lcl|Aclame:pro 337 LGDNYL-------STISTATRWGALAENQATFVLQ-EAGYIPK-----DLPAPENTNK-------KTTGQS 387 (392) Q Consensus 337 ~~~~~~-------~~~~~~~~~g~~T~nE~R~~l~-~~g~~~~-----e~~~~e~~~~-------~~~gd~ 387 (392) +.++++ +.+..++++|++|++|+|+.|. +.|..++ +.+..++... -+.||. T Consensus 391 s~kekAe~~~~~a~a~~~~~~~g~is~~e~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g 461 (461) T protein:vir:80 391 DSKTDAEVRKLTAEADQIYIVNGVLDPDEVKETRFGRFGLENSSKFSGDSAEIDKLAKLVYDAYAKKNADG 461 (461) T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCccCCCCCchhhhhhhhccccccccCCCC Confidence 665554 4578889999999999999885 3333332 2222222111 111222 No 116 >protein:vir:108215 Length: 469 # NCBI annotation: gp6 # Family: family:all:2372 # MgeID: mge:2004 # MgeName: Giles # Cross-refs: genbank:acc:YP_001552335;genbank:gi:160700655;genbank:GeneID:5758935 Probab=99.69 E-value=7.6e-16 Score=103.48 Aligned_cols=378 Identities=12% Similarity=0.026 Sum_probs=217.7 Q ss_pred hhHhhcccccccccccccc-cccccchhhhhh------hhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 5 ILNFINQTNDPPEVGSVQS-YFPDGNDAQIME------SLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) +-..............+.. ...+ ....+. .+.+..+..+..+...+.+.|.+|++.+...|.+++|.|... T Consensus 1 ~~~~~~~~~p~~~~g~~~~~~~~~--~~~~~~~~e~~~~lr~~~~~~ly~~m~e~D~~i~s~l~~rk~av~~~~w~v~p~ 78 (469) T protein:vir:10 1 MTERVKTAAPVSEAGYVFGSGVVD--GWTVWDPFEQTPELQWPQSVAVYSRMDNEDSRVTSLLEAISLPIRSTPWRIRAN 78 (469) T ss_pred CCCcccCCCCccchhhhhhccccc--chhhccccccccccccccchHHHHHHHhhChHHHHHHHHHHHHHhcCCceEecC Confidence 0011111111101111100 0000 001111 122222222333333358999999999999999999999753 Q ss_pred cccc--------ccccC-------------CccCCHHHHHHHHHHHHHHhCCeeEEEeecc-----CC--ceEEEEEecc Q lcl|Aclame:pro 78 KNQG--------IIDNP-------------STNANKHGFWQSMFAQLLLGGEAFAYRWRNA-----NG--ADMKWEYLRP 129 (392) Q Consensus 78 ~~~~--------~~~~P-------------N~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~-----~G--~~~~l~~l~~ 129 (392) .... .+..+ +-..++++++..++.+.+.+|-++.++++.. +| .+..+.+.++ T Consensus 79 ~~~~e~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~w~~~l~~~l~~a~~~G~s~~Eivw~~~~~~~dG~~~~~~l~~rp~ 158 (469) T protein:vir:10 79 GASDEVTEFVSRNLMVPIDGEDDVRNPGRSRGRFSWAEHLEEVTSPTLQFGHAVFEQVYRPRNQSPDGRFWLRKLAPRPQ 158 (469) T ss_pred CCCHHHHHHHHHHHHhhhhhhhhhhhhhhhhccccHHHHHHHHHHHhhhhCceeeeeeeecccccCCCceeeeeeeecCc Confidence 3211 11111 1234678888888888888999999998653 34 3666777777 Q ss_pred ccce-eeecCccceEEEEEEecC--------cceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 130 SQVN-TYYFEYENGMYYNITFDD--------PKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLT 200 (392) Q Consensus 130 ~~v~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~ 200 (392) ..+. ...+.+++.+........ ........++...+++.++....+..+|.|.+..+.-.........++. T Consensus 159 ~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lp~~k~i~~~~~~~~g~p~g~gLlr~~~~~~~fK~~~~~~w 238 (469) T protein:vir:10 159 WTISKFNVAPDGGLESIEQIAPPARTRGSLYVANIAPPEIPVNRLVVYTRNKRPGQWQGKSILRSAYKHWLLKDKLLRIE 238 (469) T ss_pred ccceeeeeccCCceeeeeecCcccccccccccCCCCccccccCcEEEEEecCCCCCcccchhHHHHHHHHHHHHHHHHHH Confidence 6553 344555555544322111 1112345677778777777777788899999999999999999999999 Q ss_pred HHHHHcCCCcceEEEeCCCCCchHHHHH-HHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 201 ISSLNSSLNVPGVLTVKGGGLLSDKDKA-SRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVY 279 (392) Q Consensus 201 ~~~~~ng~~~~~il~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~f 279 (392) ..|.+.-|.|--+.+++.+.+++++... +.........+ ..++++.|++++-+..+.+...|.+..++..++|+.+. T Consensus 239 ~~f~EryG~P~~vgky~~~a~~~ek~~l~~a~~~~~~g~~--a~~iip~~~~ie~~ea~g~~~~~~~li~~~d~~Isk~i 316 (469) T protein:vir:10 239 AATAERNGMGIPVGTASSATDEDEVRKMAALARSVRGGIN--AGVGLAQGQILELLGVSGNLPDIRRAIEGHDRSIALSG 316 (469) T ss_pred HHHHHHcCCcceEEecCCCCCHHHHHHHHHHHHHHhcCCc--eEEEccCCceEEEeecCCCchHHHHHHHHHHHHHHHHH Confidence 9999999999888888776555543222 22222222222 35678899998888777666678889999999988765 Q ss_pred cccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--------------hcccchhhhhcchHHHHHHH Q lcl|Aclame:pro 280 GLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSDH--------------ISVNMRPAIDPLGDNYLSTI 345 (392) Q Consensus 280 gVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~--------------~~~d~~~~~~~~~~~~~~~~ 345 (392) -=.---.+..+.+++..+.......+.++-.++.|++.||+.|.+. +.|+. ...+.+..++.+ T Consensus 317 LG~tlTs~~~gGS~a~~~vh~ev~~d~~~sDa~~i~~tln~~li~~l~~lN~g~~~~~P~~~~~~---~e~~~~~~a~~i 393 (469) T protein:vir:10 317 LAHFLNLDGKGGSYALASVLEDPFTQAVHAYATSICRIANQHIIEDLVDINFGVDTPAPVLTFDP---IGSRQDLTAAAV 393 (469) T ss_pred hcccccccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccEEEecC---CCCcHHHHHHHH Confidence 2211111111111122233445566788888999999999877542 22221 123445667888 Q ss_pred HHHHhCCCc-----CHHHHHHHHHhCCCCc--cccccccCC---------------CCCCCCCCCCCCC Q lcl|Aclame:pro 346 STATRWGAL-----AENQATFVLQEAGYIP--KDLPAPENT---------------NKKTTGQSNEPVP 392 (392) Q Consensus 346 ~~~~~~g~~-----T~nE~R~~l~~~g~~~--~e~~~~e~~---------------~~~~~gd~~~p~p 392 (392) ..+...|+. +.+.+|+.+ |+++ .+.+..... .+...++..++.| T Consensus 394 ~~l~~~G~~~~~~~~~~~~~e~~---gip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (469) T protein:vir:10 394 KLLYDAGVFDDDPAVKRAIRQRF---NLPSELNDTPSAEPEEPAAVPNQSAAPARTRSSGNADARARAP 459 (469) T ss_pred HHHHhcCCccCccccHHHHHHHh---CCCCCCCCcccccchhcccCCCCCccccccCCCCCcccccccC Confidence 899999984 456678776 5542 221211110 0011122222333 No 117 >protein:vir:99853 Length: 488 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1480 # MgeName: B3 # Cross-refs: genbank:acc:YP_164068;genbank:gi:56692600;genbank:GeneID:3192581 Probab=99.61 E-value=2.8e-14 Score=94.87 Aligned_cols=366 Identities=10% Similarity=-0.039 Sum_probs=199.6 Q ss_pred hcccccccccccc---c---ccccccchhhhhhhhcCCCCccc-chhhhhcchHHHHHHHHHHHhhhhCceeeeccccc- Q lcl|Aclame:pro 9 INQTNDPPEVGSV---Q---SYFPDGNDAQIMESLLGDNNEWV-SARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ- 80 (392) Q Consensus 9 ~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~v-~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~- 80 (392) +++..-.....+. . ..++.+...+.-..+....+..+ .-+..++.+.|.+|++.+...|.+++|.+...... T Consensus 1 v~~~~l~~e~at~~~~~d~~~~~~~~l~~~~~~il~~a~~g~~~~y~~l~~D~~i~s~l~~rk~av~~~~w~i~p~~~~~ 80 (488) T protein:vir:99 1 MEKPALGREIATSGDGRDITRPFISGLQVPNDSILQRRGGNDLRVYEEILSDAQVKTVWGQRQLAVVSREWKVEAGGDRP 80 (488) T ss_pred CCccchhHHHHHHHhhhhhhccccCCCCCCChHHHHhhccCCHHHHHHHhhChHHHHHHHHHHHHHhcCCceEEcCCCCh Confidence 3322211111100 0 00111100001111111111111 12344678999999999999999999999743221 Q ss_pred ------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC-C--ceEEEEEeccccceeeecCccceEEEEEEecC Q lcl|Aclame:pro 81 ------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN-G--ADMKWEYLRPSQVNTYYFEYENGMYYNITFDD 151 (392) Q Consensus 81 ------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~-G--~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~ 151 (392) ..+..-.......++++.+. +.+++|.+..++++..+ | .|..+.+.++.++.+. .+++..+.. .++ T Consensus 81 ~~~~~ae~v~~~l~~~~~~~~l~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d--~~~~l~~~~--~~~ 155 (488) T protein:vir:99 81 IDQAAAEHLEQQLQRVGWDRVTSKML-FGVFYGYAVSELIYGRDDRYITLEAIKVRNRRRFRYD--QDGGLRLLT--PNN 155 (488) T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHH-hhhhhcceeEEEEEeecCCeeeEeeeeeecccceeec--CCCceEEec--cCC Confidence 11111112235667777666 46789999999987544 3 4678889999887653 334333221 122 Q ss_pred cceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCC-CCCchHHHHHHH Q lcl|Aclame:pro 152 PKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKG-GGLLSDKDKASR 230 (392) Q Consensus 152 ~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~-~~~~~~~~~~~~ 230 (392) ...+..++.+..-++|. +....+..+|.|.+..+.-.........++...|.+.-|.|-.+.+++. +.+++++ +.+ T Consensus 156 ~~~g~~lp~~~~~i~~~-~~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P~~igky~~~~a~~~ek--~~l 232 (488) T protein:vir:99 156 MFEGEPCPAPYFWHFST-GADNDDEPYGLGLAHWLYWPVFFKRNGIKFWLIFLDKFGMPTAVGRYDDKTATPEDK--AKL 232 (488) T ss_pred CCCccccccCceEEEEe-ecCCCCCcccchHHHHHHHHHHHHHhhHHHHHHHHHHcCCceeeeecCCCCCCHHHH--HHH Confidence 22232222232334444 3344567789999999999999999999999999999999988888875 3333332 222 Q ss_pred HHHHhccccCCceeeccCCceEeecccCh-hhHHHHHHHHHHHHHHHHHhcccHHHcCCc----ccc--cchHHHHHHHH Q lcl|Aclame:pro 231 SRSFMKRSRSGGPVVLDDLEEFTALEIKS-NVAQLLSQTDWTSKQYAKVYGLPDSYIGGQ----GDQ--QSSIQQISGMY 303 (392) Q Consensus 231 ~~~~~~~~~~g~~~vl~~g~~~~~l~~~~-~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~----~~~--~~~~~~~~~~~ 303 (392) .+......+ ...++++.|++++-+..+. ....|.+..++..++|+.+ ++|.+ ..+ ++..+...... T Consensus 233 ~~av~~~~~-~~~~viP~~~~ie~~ea~~~~~~~~~~li~~~d~~Isk~------iLGqtlts~~~~Gs~a~~~vh~~v~ 305 (488) T protein:vir:99 233 LAALHAIQT-DSAIIMPAGMQAELLEAGRSGTADYKTLHDTMDATIAKV------GLGQVASTQGTPGRLGNDDLQADVR 305 (488) T ss_pred HHHHHHHhc-CcEEEecCCceeEEeecCCCChHHHHHHHHHHHHHHHHH------HhhhhhcccccccchhhHHHHHHHH Confidence 222222222 2346667776665554322 2234788888999999887 34321 111 11222334455 Q ss_pred HHHHHHHHHHHHHHHHHHhhhh-hccc----------chhhhhcchHHHHHHHHHHHhC-CC-cCHHHHHHHHHhCCCCc Q lcl|Aclame:pro 304 ASALNRYLRPAISELEYKLSDH-ISVN----------MRPAIDPLGDNYLSTISTATRW-GA-LAENQATFVLQEAGYIP 370 (392) Q Consensus 304 ~~~l~p~l~~i~~~l~~~l~~~-~~~d----------~~~~~~~~~~~~~~~~~~~~~~-g~-~T~nE~R~~l~~~g~~~ 370 (392) .+.++-.++.|++.+|..|... +.++ .......|.+.+++.+..+++. |+ ++..++|+.+ |+++ T Consensus 306 ~d~~~aDa~~i~~tln~~li~~l~~~N~~~~~~p~~~~~~~e~edl~~~a~~~~~l~~~~G~~i~~~~i~e~~---Gip~ 382 (488) T protein:vir:99 306 LDLVKADADLICESFNLGPARWLTEWNFPGAQPPRVYRVIEEPEDITAKAERDEKVFRMSGFRPTRGYVQETY---GVEV 382 (488) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcCCcCCceeEecCCCcccHHHHHHHHHHHHhhcCCCCCHHHHHHHc---CCCC Confidence 6778888999999999877542 1111 1111224556778888899885 65 7778888876 6654 Q ss_pred ccccc--ccCCCCCCCCCCCC-CCC Q lcl|Aclame:pro 371 KDLPA--PENTNKKTTGQSNE-PVP 392 (392) Q Consensus 371 ~e~~~--~e~~~~~~~gd~~~-p~p 392 (392) .+... ....+....+..++ +.| T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (488) T protein:vir:99 383 ESTQAEATAPTPSTEFAEGDQPSDP 407 (488) T ss_pred cccccccccCCCcccCCCCCCCCCc Confidence 22111 11111111111111 111 No 118 >protein:vir:103860 Length: 528 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1522 # MgeName: D3112 # Cross-refs: genbank:acc:NP_938234;genbank:gi:38229139;genbank:GeneID:2648175 Probab=99.60 E-value=3.4e-14 Score=94.45 Aligned_cols=374 Identities=10% Similarity=0.001 Sum_probs=204.1 Q ss_pred c-hhhHhhccccccccccccc--------ccc----cccchh-hhhhhhcCCCCcccchh-----hh-hcchHHHHHHHH Q lcl|Aclame:pro 3 L-PILNFINQTNDPPEVGSVQ--------SYF----PDGNDA-QIMESLLGDNNEWVSAR-----AA-LRNSDLFSIILQ 62 (392) Q Consensus 3 M-g~~~~~~~~~~~~~~~~~~--------~~~----~~~~~~-~~~~~~~~~~~~~v~~~-----~a-~~~~~v~~~i~~ 62 (392) | .|++...+..+........ ..+ ..+..+ .....+....+..+... .. .+.+.|.+|++. T Consensus 1 ~~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~il~~a~~gd~~~~~~L~~~m~e~D~~i~s~l~~ 80 (528) T protein:vir:10 1 MAAIVDIYGNPLRTQQLRKQQTAHLAGLAKEFANHPAKGLTPAKLAHILIEAEQGHLQAQAELFMDMEERDAHLFAEMSK 80 (528) T ss_pred CCeeECCCCCccccccccchhhhhhhhhhhhhcccCCCCCCHHHHHHHHHhhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 6 4456655543322111111 000 001111 11122222222222211 11 268899999999 Q ss_pred HHHhhhhCceeeeccccc-----c---ccccCCccCC-HHHHHHHHHHHHHHhCCeeEEEeeccC---CceEEEEEeccc Q lcl|Aclame:pro 63 LSSDLAIVKINAEKKKNQ-----G---IIDNPSTNAN-KHGFWQSMFAQLLLGGEAFAYRWRNAN---GADMKWEYLRPS 130 (392) Q Consensus 63 ia~~ia~~p~~~~~~~~~-----~---~~~~PN~~~s-~~~f~~~~~~~l~l~Gn~~~~i~r~~~---G~~~~l~~l~~~ 130 (392) +...|.+++|.|...... . .+...=...+ ..+++.. +.+.+++|.+..++++..+ ..|..+.+.++. T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~~f~~~i~~-~lda~~~G~s~~Ei~w~~~~g~~~~~~~~~r~~~ 159 (528) T protein:vir:10 81 RKRAVLGLDWTIEPPRNASAAEKADAEYLHELLLDLEGIEDLMLD-CMDGVGHGYSAIELDWSLQGREWLPQAFDHRPQS 159 (528) T ss_pred HHHHHhcCCceEecCCCCCHHHHHHHHHHHHHHhCCccHHHHHHH-HHhhhhhcceeEEEEEeecCCceeEEEeeeeccc Confidence 999999999999753211 0 1111101111 3333333 3445679999999986543 347788899998 Q ss_pred cceeeecCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCc Q lcl|Aclame:pro 131 QVNTYYFEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNV 210 (392) Q Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~ 210 (392) ++.+..+ ++..+.. .++... ...+++..++..++....+..+|.|.+..+.-.........++...|.+.-|.| T Consensus 160 ~f~~~~~--~~~~l~~--~~~~~~--g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~yG~P 233 (528) T protein:vir:10 160 WFQLNPD--DQDELRL--RDNSIA--GEVLQPFGWIMHKPRSRSGYVARSGLFRVLAWPYLFKHYSTADLAEMLEIYGLP 233 (528) T ss_pred ceeeccC--CCcEEec--cCCCCC--ceeecCCCeEEEeecCCCCCccccchHHHHHHHHHHHHhhHHHHHHHHHHcCCC Confidence 8776443 3322211 112222 235666666666666777888999999999999999999999999999999999 Q ss_pred ceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccCh-hhHHHHHHHHHHHHHHHHHhcccHHHcCC- Q lcl|Aclame:pro 211 PGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKS-NVAQLLSQTDWTSKQYAKVYGLPDSYIGG- 288 (392) Q Consensus 211 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~-~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~- 288 (392) --+.+++.+.+++++. .+.+......+ ...++++.|++++-+..+. .-..|.+..++..++|+.+.- -..+-.. T Consensus 234 ~~igky~~~a~~~ek~--~L~~al~~i~~-~~~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~iL-GqtlTs~~ 309 (528) T protein:vir:10 234 IRLGKYPPGTPDEEKV--TLLRAVTGLGH-AAAGIIPESMSIDFQEASKGSAEPFMAMMRWCDDSMSKAIL-GGTLTSQT 309 (528) T ss_pred eEEEecCCCCCHHHHH--HHHHHHHHHhh-CcEEEecCCceeEEeecCCCChhHHHHHHHHHHHHHHHHHh-hhhhhccc Confidence 9899988765544432 23232222222 2346677776666555332 223477888888898887641 1112111 Q ss_pred cccccchH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----------------hcccchhhhhcchHHHHHHHHHH Q lcl|Aclame:pro 289 QGDQQSSI---QQISGMYASALNRYLRPAISELEYKLSDH-----------------ISVNMRPAIDPLGDNYLSTISTA 348 (392) Q Consensus 289 ~~~~~~~~---~~~~~~~~~~l~p~l~~i~~~l~~~l~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~ 348 (392) .++.+++. +-......+.++-.++.|++.||+.|.+. +.|+.. -..|...+++.+..+ T Consensus 310 ~~g~~gS~Alg~vh~~v~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~~~~~--e~eDl~~~a~~~~~L 387 (528) T protein:vir:10 310 SESGGGAYALGQVHNEVRHDLLAADARQLAATLSRDLLWPLLVLNRSGNLDARRAPRLVFDLK--DRADLAAMATSLPPL 387 (528) T ss_pred cccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEecCC--CcccHHHHHHHHHHH Confidence 11111222 12234456777788899999999877432 122221 123445678888899 Q ss_pred HhCCC-cCHHHHHHHHHhCCCCc---cc-cccccCCCCC------CCC------CCCCCCC Q lcl|Aclame:pro 349 TRWGA-LAENQATFVLQEAGYIP---KD-LPAPENTNKK------TTG------QSNEPVP 392 (392) Q Consensus 349 ~~~g~-~T~nE~R~~l~~~g~~~---~e-~~~~e~~~~~------~~g------d~~~p~p 392 (392) ...|+ ++..++|+.+ |++. ++ +-..+..++. ++. ....+.+ T Consensus 388 ~~~G~~i~~~~i~e~~---gip~p~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (528) T protein:vir:10 388 VKLGVQVPVNWVQEQL---GIPLPANGEAVLGDQAGAGIAQLSRRPGPRIAALAQVIGPRY 445 (528) T ss_pred HhCCCCCCHHHHHHHh---CCCCCCCCcccccCCCcccccccCcccccccccccccccccc Confidence 99998 8889999987 5531 11 1100100000 000 0000000 No 119 >protein:vir:389 Length: 530 # NCBI annotation: gp4 # Family: family:all:47 # MgeID: mge:325 # MgeName: N15 # Cross-refs: genbank:acc:NP_046899;genbank:gi:9630468;genbank:GeneID:1261643 Probab=99.57 E-value=6.4e-14 Score=92.90 Aligned_cols=388 Identities=9% Similarity=-0.007 Sum_probs=207.1 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCC--CC----------cccchhhhhcchHHHHHHHHHHHhhh Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGD--NN----------EWVSARAALRNSDLFSIILQLSSDLA 68 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----------~~v~~~~a~~~~~v~~~i~~ia~~ia 68 (392) |+|+-..-...+........+..- ..+.......|.... .. ..-+.+-+..+|.+.+||+.+.+.+- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~-a~~~~~~~~~w~~~~~s~~~~i~~~~~~lr~RaRdl~rNn~~a~~av~~~~~nvV 79 (530) T protein:vir:38 1 MKIPSLVGPDGKTSLREYAGYHGG-GGGFGGQLRGWNPPSESADAALLPNYSRGNARADDLVRNNGYAANAVQLHQDHIV 79 (530) T ss_pred CccceeecCccccchHHHhhhhcc-cCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhh Confidence 777655433322221111111100 000111111111100 00 01122233456888999998887765 Q ss_pred hCceeeeccc----------------------cccccccCC------ccCCHHHHHHHHHHHHHHhCCeeEEEeeccC-C Q lcl|Aclame:pro 69 IVKINAEKKK----------------------NQGIIDNPS------TNANKHGFWQSMFAQLLLGGEAFAYRWRNAN-G 119 (392) Q Consensus 69 ~~p~~~~~~~----------------------~~~~~~~PN------~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~-G 119 (392) .--+++.-+. ...+...|| ..+|..++.+.++..++..|++|+.+.+... | T Consensus 80 G~Gi~~~~~p~~~~l~~~~~~~~~~~~~ie~~w~~W~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~~~~~~~~g 159 (530) T protein:vir:38 80 GSFFRLSYRPSWRYLGINEEDSRAFSRDVEAAWNEYAEDDFCGIDAERKRTFTMMIREGVAMHAFNGELCVQATWDSDST 159 (530) T ss_pred CCCceeeeccchhhcCCCHhHHHHHHHHHHHHHHHhhcCCCcEEeeeccCCHHHHHHHHHHHHhhCCceEEEeeeccCCC Confidence 5455544221 112234454 3578999999999999999999998876543 3 Q ss_pred --ceEEEEEeccccceee--------------ecCccceEEEEEEecCc--c-ee------eeEEEeceeEEEecCCCcc Q lcl|Aclame:pro 120 --ADMKWEYLRPSQVNTY--------------YFEYENGMYYNITFDDP--K-IE------PILQAPQSDLIHMKLLSID 174 (392) Q Consensus 120 --~~~~l~~l~~~~v~~~--------------~~~~~~~~~~~~~~~~~--~-~~------~~~~~~~~~vih~~~~~~~ 174 (392) .+..|..|+|+.+... .|..|..+.|.+..... . .. ....++..+|||+...... T Consensus 160 ~~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~vlH~f~~~r~ 239 (530) T protein:vir:38 160 RLFRTQFKMVSPKRVSNPNNIGDTRNCRAGVKINDSGAALGYYVSDDGYPGWMAQNWTYIPRELPGGRPSFIHVFEPMED 239 (530) T ss_pred CccceEEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEEeeccCCCccccccceeeeeeccChhHeEeeccccCC Confidence 3678999999887642 23444444444432211 0 01 1234667799999988888 Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch------------HHHHHH----HHHHHh--- Q lcl|Aclame:pro 175 GGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS------------DKDKAS----RSRSFM--- 235 (392) Q Consensus 175 ~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~------------~~~~~~----~~~~~~--- 235 (392) +...|+|.+..+...+.-...-.+....-.+=.+...++|+.+.+.... ...... ....+. T Consensus 240 gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (530) T protein:vir:38 240 GQTRGANAFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGADNKEQQSKLTGWLGEMAAYYSAAP 319 (530) T ss_pred CcccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeeccCCccccccccccCCcccccccccccchhhhhcccccc Confidence 8899999999988777666655555554444445556677654321110 000000 111111 Q ss_pred ccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHc-CCccc-ccchH-HHH-------HHHHHH Q lcl|Aclame:pro 236 KRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGD-QQSSI-QQI-------SGMYAS 305 (392) Q Consensus 236 ~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~-~~~~~-~~~-------~~~~~~ 305 (392) -.-..|.+..|..|.+++.++.+-...+|.+..+...+.||+.+|||.+.| |+.++ ++++. ... +..-.. T Consensus 320 ~~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~f~~~~lr~iaaglGi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~ 399 (530) T protein:vir:38 320 VRLGGARVPHLLPGDSLNLQSAQDTDNGYSTFEQSLLRYIAAGLGVSYEQLSRNYSQMSYSTARASANESWAYFMGRRKF 399 (530) T ss_pred eeccCceeeecCCCCeeeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHH Confidence 112466788899999999888776667889999999999999999999988 43322 22221 111 111123 Q ss_pred HHHHHHHHHHHHH-HHHhhh-hhc------ccc----hhhhh----------cchHHHHHHHHHHHhCCCcCHHHHHHHH Q lcl|Aclame:pro 306 ALNRYLRPAISEL-EYKLSD-HIS------VNM----RPAID----------PLGDNYLSTISTATRWGALAENQATFVL 363 (392) Q Consensus 306 ~l~p~l~~i~~~l-~~~l~~-~~~------~d~----~~~~~----------~~~~~~~~~~~~~~~~g~~T~nE~R~~l 363 (392) .+.++++++-+++ +..+.. .+. ++. ....+ .|....+......+++|+.|+-++-+.. T Consensus 400 ~~~~~~~pi~~~wl~~av~~G~i~~p~~~~~~~~~~~~a~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~s~~~~~a~~ 479 (530) T protein:vir:38 400 VASRQACQMFLCWLEEAIVRRVVTLPSKARFSFQEARTAWGNANWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECAKR 479 (530) T ss_pred HHHHHhhHHHHHHHHHHHHcCCccCCCCCCCCchhhHHhhhceeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHc Confidence 4455556555542 222221 111 111 11111 2555666778899999999998765432 Q ss_pred HhCCCCcccc--------ccc--cCCCC--------CCCCCCCCCCC Q lcl|Aclame:pro 364 QEAGYIPKDL--------PAP--ENTNK--------KTTGQSNEPVP 392 (392) Q Consensus 364 ~~~g~~~~e~--------~~~--e~~~~--------~~~gd~~~p~p 392 (392) |..+.++ ..+ -+++. ..+....+..| T Consensus 480 ---G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~ 523 (530) T protein:vir:38 480 ---GDDYQEIFAQQVRESMERRAAGLNPPAWAAAAFEAGVKKSNEEE 523 (530) T ss_pred ---CCCHHHHHHHHHHHHHHHHHcCCCCCCCcccccCCCCCCCCCCC Confidence 4444321 000 01111 01111111111 No 120 >protein:vir:107880 Length: 491 # NCBI annotation: gp29 # Family: family:all:313 # MgeID: mge:1565 # MgeName: BcepMu # Cross-refs: genbank:acc:YP_024702;genbank:gi:48696939;genbank:GeneID:2845968 Probab=99.57 E-value=1.4e-13 Score=91.10 Aligned_cols=368 Identities=9% Similarity=-0.049 Sum_probs=207.0 Q ss_pred CcchhhHhhcccccccc-----c---ccc----cccccccchhhhhhhhcCCC-CcccchhhhhcchHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MILPILNFINQTNDPPE-----V---GSV----QSYFPDGNDAQIMESLLGDN-NEWVSARAALRNSDLFSIILQLSSDL 67 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~-----~---~~~----~~~~~~~~~~~~~~~~~~~~-~~~v~~~~a~~~~~v~~~i~~ia~~i 67 (392) |.=+|+.--.+..+... . .+. ..+....+....-..|.... +..+ .+..++.+.|.+|++.+...| T Consensus 1 m~~~i~~~~g~p~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~iLr~~~~~~~~-y~~m~~D~~i~s~l~~Rk~av 79 (491) T protein:vir:10 1 MSKGLWVSPTEFVTFGEPDKSLSSQIATRARSIDFFALGMYLPNPDPVLKALGKDIRV-YRELRADAHVGGCVRRRKAAV 79 (491) T ss_pred CCCceeCCCCCccCcccCChHHHHHHHhhhcccccccccCCccchHHHHHhcCCCHHH-HHHHhhChHHHHHHHHHHHHH Confidence 77788753322211110 0 000 00000000000001111111 1112 233457899999999999999 Q ss_pred hhCceeeecccccc----ccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCC---ceEEEEEeccccceeeecCcc Q lcl|Aclame:pro 68 AIVKINAEKKKNQG----IIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANG---ADMKWEYLRPSQVNTYYFEYE 140 (392) Q Consensus 68 a~~p~~~~~~~~~~----~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G---~~~~l~~l~~~~v~~~~~~~~ 140 (392) .+++|.+.....+. ....--......+++..+. +.+++|.+..++++..+| .|..+.+.++.++.+.. ++ T Consensus 80 ~~~~w~i~~~~~~~~~~e~v~e~l~~~~~~~~l~~~l-da~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d~--~~ 156 (491) T protein:vir:10 80 KALEWGLDRGKAKSRVAKSIADVFADLDLSRIVTEML-DAVLYGYQPMEITWGKVGNYIVPIDVVGKPADWFVYDP--EN 156 (491) T ss_pred hCCCcEEecCCCCHHHHHHHHHHHhcCCHHHHHHHHH-HhhhhcceeEEEEEeecCCeeEEEEeeeecccceeecc--CC Confidence 99999997533221 1111111234566666665 567899999999876543 46789999998876543 33 Q ss_pred ceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCC Q lcl|Aclame:pro 141 NGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGG 220 (392) Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~ 220 (392) +..+.. .++ ......+++..+++.++....+..+|.|.+..+.-.........++...|.+.-|.|--+.+++.+. T Consensus 157 ~l~~~~--~~~--~~~g~~l~~~k~i~~~~~~~~~~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~yG~P~~igky~~~a 232 (491) T protein:vir:10 157 QLRFRS--KDH--WMQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSPMLVGKHPRSA 232 (491) T ss_pred ceEEec--CCC--CCCcceecCCCEEEEEecCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCCCC Confidence 333221 111 1223467777777777776777789999999999999999999999999999999999899998766 Q ss_pred CchHHHHHHHHHHHhccccCCceeeccCCceEeeccc--ChhhH-HHHHHHHHHHHHHHHHhcccHHHcCCc--ccccch Q lcl|Aclame:pro 221 LLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEI--KSNVA-QLLSQTDWTSKQYAKVYGLPDSYIGGQ--GDQQSS 295 (392) Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~--~~~d~-~~~e~~~~~~~~Ia~~fgVP~~~lg~~--~~~~~~ 295 (392) +++++. .+.+......+ ...++++.|++++-+.. +.... .|.+..++..++|+.+ ++|++ ++++++ T Consensus 233 ~~~ek~--~l~~al~~~~~-~a~~viP~~~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~------iLGqtlTt~~~gs 303 (491) T protein:vir:10 233 SDGEKN--LLLDCLEDMVQ-DAVAVVPDDSSIEIKEAAGKTGSADVYERLLHFCRGEVSIA------LLGQNQTTEATST 303 (491) T ss_pred CHHHHH--HHHHHHHHHhc-CcEEEecCCceeEEEecCCCCCChhHHHHHHHHHHHHHHHH------HhhhhcccCcccc Confidence 555433 22222222111 23567777776666543 22223 3777788888888776 44432 112222 Q ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHhhh-hh------------cccchhhhhcchHHHHHHHHHHHhCCC-cCHHH Q lcl|Aclame:pro 296 I---QQISGMYASALNRYLRPAISELEYKLSD-HI------------SVNMRPAIDPLGDNYLSTISTATRWGA-LAENQ 358 (392) Q Consensus 296 ~---~~~~~~~~~~l~p~l~~i~~~l~~~l~~-~~------------~~d~~~~~~~~~~~~~~~~~~~~~~g~-~T~nE 358 (392) . +.......+.++-.++.+++.+|+ |.. .+ .++.. ..+.+.+++.+..+...|+ ++..+ T Consensus 304 ~a~~~vh~~v~~di~~~D~~~i~~tln~-li~~l~~~N~~~~~~p~f~~~~~---~e~~~~~a~~~~~L~~~G~~i~~~~ 379 (491) T protein:vir:10 304 RASAQAGLEVTDDIRDGDKAVVSEAMNM-LIRWICDLNFDGADRPVFDMWEQ---EQVDEIQAGRDQKLTQAGARFTPAY 379 (491) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCcceEEecCc---CchhHHHHHHHHHHHhCCCcCCHHH Confidence 2 223344556677778888888885 432 22 22211 1223567788889998887 77788 Q ss_pred HHHHHHhCCCCccc---cccccCCCCC-------CCCCCCCCCC Q lcl|Aclame:pro 359 ATFVLQEAGYIPKD---LPAPENTNKK-------TTGQSNEPVP 392 (392) Q Consensus 359 ~R~~l~~~g~~~~e---~~~~e~~~~~-------~~gd~~~p~p 392 (392) +|+.+ |++..+ .+.....+.. .....+++.+ T Consensus 380 i~e~~---Gip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (491) T protein:vir:10 380 FKRAY---NLQDGDLDERPLPVSAVDTVGAASFAEFEAPDQDAL 420 (491) T ss_pred HHHHh---CCCCCCcCccccccCCCCCcccccccccCCCCCCch Confidence 88877 654311 1110000000 0001111111 No 121 >protein:vir:79063 Length: 491 # NCBI annotation: gp3 # Family: family:all:313 # MgeID: mge:1862 # MgeName: phiE255 # Cross-refs: genbank:acc:YP_001111203;genbank:gi:134288841;genbank:GeneID:4960737 Probab=99.57 E-value=8.3e-14 Score=92.29 Aligned_cols=367 Identities=8% Similarity=-0.047 Sum_probs=204.2 Q ss_pred CcchhhHhhcccccc----cc----ccccc----ccccccchhhhhhhhcCCCC-cccchhhhhcchHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MILPILNFINQTNDP----PE----VGSVQ----SYFPDGNDAQIMESLLGDNN-EWVSARAALRNSDLFSIILQLSSDL 67 (392) Q Consensus 1 m~Mg~~~~~~~~~~~----~~----~~~~~----~~~~~~~~~~~~~~~~~~~~-~~v~~~~a~~~~~v~~~i~~ia~~i 67 (392) |.=+|+.--.+..+. +. ..+.. .....+..+..-..+....+ ..+ .+..++.+.|.+|++.+...| T Consensus 1 ~~~~i~~~~g~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~p~~~~il~~~~~~~~~-y~~m~~D~~i~s~l~~Rk~av 79 (491) T protein:vir:79 1 MSKGLWVSPTEFVKFGEPDKSLSSQIATRARSIDFFALGMYLPNPDPVLKALGKDIRV-YRELRADAHVGGCVRRRKAAV 79 (491) T ss_pred CCCeeeCCCCCcccccccchhHHHHHhhhccccccccccccCcchhHHHhhccCCHHH-HHHHhhChHHHHHHHHHHHHH Confidence 777777422221111 00 00000 00000000000011111111 112 234467899999999999999 Q ss_pred hhCceeeecccccc--------ccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC-C--ceEEEEEeccccceeee Q lcl|Aclame:pro 68 AIVKINAEKKKNQG--------IIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN-G--ADMKWEYLRPSQVNTYY 136 (392) Q Consensus 68 a~~p~~~~~~~~~~--------~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~-G--~~~~l~~l~~~~v~~~~ 136 (392) .+++|.+....... .+.++ ...+++..+ .+.+++|.+..++++..+ | .|..+.+.++.++.+.. T Consensus 80 ~~~~w~i~~~~~~~~~a~~i~e~l~~~----~~~~~i~~~-lda~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~~f~~d~ 154 (491) T protein:vir:79 80 KALEWGLDRGKAKSRVAKSIADVFADL----DLSRIATEM-LDAVLYGYQPMEITWGKVGNYIVPIDVVGKPADWFVYDP 154 (491) T ss_pred hCCCcEEecCCCCHHHHHHHHHHHhcC----CHHHHHHHH-HHhhhhcceeEEEEEeecCCeeeEEeeeeecccceeecc Confidence 99999997543221 12222 345555555 456789999999986554 3 46789999998877543 Q ss_pred cCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEe Q lcl|Aclame:pro 137 FEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTV 216 (392) Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~ 216 (392) +++..+.. .++. .....+++..+++.++....+..+|.|.+..+.-.........++...|.+.-|.|--+.++ T Consensus 155 --~~~l~l~~--~~~~--~~g~~lp~~k~i~~~~~~~~g~p~g~gLl~~~~w~~~fK~~~~~~w~~f~E~~G~P~~igky 228 (491) T protein:vir:79 155 --ENQLRFRS--KEHW--VQGEELPARKFLVPRQEATYLNPYGFPDLSMCFWPTTFKKGGLKFWVQFTEKYGSPMLVGKH 228 (491) T ss_pred --CCceEEee--cCCC--CCceeecCCCeEEEEecCCCCCcccchhHHHHHHHHHHHHhhHHHHHHHHHHcCCCeEEEec Confidence 33333321 1211 22346777878887777777778999999999999999999999999999999999989998 Q ss_pred CCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeeccc--Chhh-HHHHHHHHHHHHHHHHHhcccHHHcCCc--cc Q lcl|Aclame:pro 217 KGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEI--KSNV-AQLLSQTDWTSKQYAKVYGLPDSYIGGQ--GD 291 (392) Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~--~~~d-~~~~e~~~~~~~~Ia~~fgVP~~~lg~~--~~ 291 (392) +.+.+++++.. +.+......+ ...++++.|++++-+.. .... ..|.+..++..++|+.+. +|++ ++ T Consensus 229 ~~~a~~~ek~~--l~~al~~~~~-~a~~viP~~~~ie~~ea~~~~g~~~~y~~li~~~d~~Isk~i------LGqtlTt~ 299 (491) T protein:vir:79 229 PRSASDAETNL--LLDRLEDMVQ-DAVAVIPDDSSIEIKEAAGKSGSADVYERLLHFCRGEVSIAL------LGQNQTTE 299 (491) T ss_pred CCCCCHHHHHH--HHHHHHHHhc-CeEEEecCCceeEEEeccCCCCChhHHHHHHHHHHHHHHHHH------hhhhhccC Confidence 77655544322 2222111111 23466777766665533 2222 237777888888887754 5532 11 Q ss_pred ccchH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc----------cchhhhhcchHHHHHHHHHHHhCCC-cCHH Q lcl|Aclame:pro 292 QQSSI---QQISGMYASALNRYLRPAISELEYKLSDHISV----------NMRPAIDPLGDNYLSTISTATRWGA-LAEN 357 (392) Q Consensus 292 ~~~~~---~~~~~~~~~~l~p~l~~i~~~l~~~l~~~~~~----------d~~~~~~~~~~~~~~~~~~~~~~g~-~T~n 357 (392) ++++. +.......+.++-.++.+++.||+.+.+.+.+ ..... ....+.+++.+..+...|+ ++.. T Consensus 300 ~~gs~a~~~vh~~v~~~i~~~D~~~i~~tln~li~~l~~~N~~~~~~p~f~~~e~-ee~~~~~a~~~~~L~~~G~~i~~~ 378 (491) T protein:vir:79 300 ATSTRASAQAGLEVTDDIRDGDKAIVVEAMNMLIRWICDLNFDGAARPVFDMWEQ-EQVDEIQAGRDEKLTRAGARFTPA 378 (491) T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceEeecCc-CchhHHHHHHHHHHHhCCCccCHH Confidence 22222 22334455677778888888888632222222 11111 1122456777888888887 7888 Q ss_pred HHHHHHHhCCCCcccc-ccccCC-CCCCCCCCCC---CCC Q lcl|Aclame:pro 358 QATFVLQEAGYIPKDL-PAPENT-NKKTTGQSNE---PVP 392 (392) Q Consensus 358 E~R~~l~~~g~~~~e~-~~~e~~-~~~~~gd~~~---p~p 392 (392) ++|+.+ |+++.+. ...... .+.+.+.+.. -.| T Consensus 379 ~~~e~~---Gip~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 415 (491) T protein:vir:79 379 YFKRAY---NLQDGDLDERPLPVSAVDAVGAASFAEFEAP 415 (491) T ss_pred HHHHHh---CCCCCCCCccccCcCcccccccccccccCCC Confidence 888877 6553111 000000 0000000000 000 No 122 >protein:vir:3420 Length: 533 # NCBI annotation: capsid component # Family: family:all:47 # MgeID: mge:70 # MgeName: lambda # Cross-refs: genbank:acc:NP_040583;genbank:gi:9626247;genbank:GeneID:2703526 Probab=99.56 E-value=8.3e-14 Score=92.30 Aligned_cols=389 Identities=9% Similarity=0.009 Sum_probs=209.0 Q ss_pred CcchhhHhhccccccccccccccccc--ccchhhhhhhhcC--CCCc----------ccchhhhhcchHHHHHHHHHHHh Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFP--DGNDAQIMESLLG--DNNE----------WVSARAALRNSDLFSIILQLSSD 66 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~----------~v~~~~a~~~~~v~~~i~~ia~~ 66 (392) |+|+-+-.+........+........ .........|... .... .-..+-+..+|.+..||+.+.+. T Consensus 1 ~~~p~~~~~~~~~~~~~~~~~~~y~~~a~~~~~~~~~w~p~~~s~~~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~n 80 (533) T protein:vir:34 1 MKTPTIPTLLGPDGMTSLREYAGYHGGGSGFGGQLRSWNPPSESVDAALLPNFTRGNARADDLVRNNGYAANAIQLHQDH 80 (533) T ss_pred CCCchhhhhhcccccchHHHHHhhhhccCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHH Confidence 99987655444322111111000000 0001111111111 0010 01122333568889999988777 Q ss_pred hhhCceeeeccc----------------------cccccccCC------ccCCHHHHHHHHHHHHHHhCCeeEEEeeccC Q lcl|Aclame:pro 67 LAIVKINAEKKK----------------------NQGIIDNPS------TNANKHGFWQSMFAQLLLGGEAFAYRWRNAN 118 (392) Q Consensus 67 ia~~p~~~~~~~----------------------~~~~~~~PN------~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~ 118 (392) +-.--+++.-+. ...+.+.|+ ..++.+++.+.++..++..|++|+.+.+... T Consensus 81 vVG~Gi~~~~~p~~~~lg~~~~~~~~~~~~ie~~w~~w~~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~f~~~~~~~~ 160 (533) T protein:vir:34 81 IVGSFFRLSHRPSWRYLGIGEEEARAFSREVEAAWKEFAEDDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQATWDTS 160 (533) T ss_pred hhCCCceeeeccchhhcCCChhHHHHHHHHHHHHHHHhhcCccceeccccccCHHHHHHHHHHHHHhCCceEEEeeeccC Confidence 644455443211 112233444 3568999999999999999999998875443 Q ss_pred -C--ceEEEEEeccccceeee--------------cCccceEEEEEEecCcc---------eeeeEEEeceeEEEecCCC Q lcl|Aclame:pro 119 -G--ADMKWEYLRPSQVNTYY--------------FEYENGMYYNITFDDPK---------IEPILQAPQSDLIHMKLLS 172 (392) Q Consensus 119 -G--~~~~l~~l~~~~v~~~~--------------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~vih~~~~~ 172 (392) | .+..|..|+|+.+.... +..|..+.|.+...... ......++..+|||+.... T Consensus 161 ~g~~~~~~lq~ie~d~l~~~~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~~~~~~~~~~~~~~~~~~~v~a~~VlH~f~~~ 240 (533) T protein:vir:34 161 SSRLFRTQFRMVSPKRISNPNNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQKWTWIPRELPGGRASFIHVFEPV 240 (533) T ss_pred CCCccceEEEEechhhcCCCCCCCCCCceEeeeEECCCCCeEEEEEeecCCCCccccccceeeeeeccChhHeeeecccc Confidence 3 36788999998876432 33333444444322111 1112346678999999888 Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch-------------HHHH---HHHHHHHhc Q lcl|Aclame:pro 173 IDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS-------------DKDK---ASRSRSFMK 236 (392) Q Consensus 173 ~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~-------------~~~~---~~~~~~~~~ 236 (392) ..+...|+|.+..+...+.-...-.+....-.+=.+...++|+.+.+.... +... ......+.+ T Consensus 241 r~gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (533) T protein:vir:34 241 EDGQTRGANVFYSVMEQMKMLDTLQNTQLQSAIVKAMYAATIESELDTQSAMDFILGANSQEQRERLTGWIGEIAAYYAA 320 (533) T ss_pred CCCcccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhheeeeecCCCcccccccccCCCcccccccccccchhhhhccCc Confidence 888899999999998877666665555555445555566777754321110 0000 111111111 Q ss_pred ---cccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcC-Cccc-ccchH-HH----H---HHHH Q lcl|Aclame:pro 237 ---RSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIG-GQGD-QQSSI-QQ----I---SGMY 303 (392) Q Consensus 237 ---~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg-~~~~-~~~~~-~~----~---~~~~ 303 (392) .-..|.+..|..|.+++.++.+-...+|.+..+...+.||+.+|||.+.|- +.++ ++++. .. . +..- T Consensus 321 ~~~~l~pG~i~~L~pGe~i~~~~~~~p~~~~~~f~~~~lr~iAaglGi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q 400 (533) T protein:vir:34 321 APVRLGGAKVPHLMPGDSLNLQTAQDTDNGYSVFEQSLLRYIAAGLGVSYEQLSRNYAQMSYSTARASANESWAYFMGRR 400 (533) T ss_pred ceeeccCceeeecCCCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcccccHHHHHHHHHHHHHHHHHHH Confidence 124677888999999999887766678999999999999999999999884 3222 22221 11 1 1112 Q ss_pred HHHHHHHHHHHHHHH-HHHhh-hhhc--------ccch--hhh----------hcchHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 304 ASALNRYLRPAISEL-EYKLS-DHIS--------VNMR--PAI----------DPLGDNYLSTISTATRWGALAENQATF 361 (392) Q Consensus 304 ~~~l~p~l~~i~~~l-~~~l~-~~~~--------~d~~--~~~----------~~~~~~~~~~~~~~~~~g~~T~nE~R~ 361 (392) ..++.++++|+-+.+ +..+. ..+. +... ... -.|....+.....++++|++|+-|+-+ T Consensus 401 ~~~~~~~~~pi~~~wl~~ail~G~i~~p~~~~~~~~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~s~~~~~a 480 (533) T protein:vir:34 401 KFVASRQASQMFLCWLEEAIVRRVVTLPSKARFSFQEARSAWGNCDWIGSGRMAIDGLKEVQEAVMLIEAGLSTYEKECA 480 (533) T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcccCCCccCCCchhhHHhhhceeeccCCccccChHHHHHHHHHHHHcCCCCHHHHHH Confidence 234555666665553 22221 1121 1110 011 125555667788899999999987654 Q ss_pred HHHhCCCCccccc--------cc--cCCC--------CCCCCCCCCCCC Q lcl|Aclame:pro 362 VLQEAGYIPKDLP--------AP--ENTN--------KKTTGQSNEPVP 392 (392) Q Consensus 362 ~l~~~g~~~~e~~--------~~--e~~~--------~~~~gd~~~p~p 392 (392) .. |..+.++- .. -+++ +..+..+.++.| T Consensus 481 ~~---G~D~~ev~~q~a~e~~~~~~~gl~~~~~~~~~~~s~~~~~~~~~ 526 (533) T protein:vir:34 481 KR---GDDYQEIFAQQVRETMERRAAGLKPPAWAAAAFESGLRQSTEEE 526 (533) T ss_pred Hc---CCCHHHHHHHHHHHHHHHHhcCCCCCCCCCcCccCCCCCCCCCC Confidence 33 44433210 00 0111 111222222222 No 123 >protein:vir:99232 Length: 526 # NCBI annotation: putative portal protein # Family: family:all:313 # MgeID: mge:1649 # MgeName: DMS3 # Cross-refs: genbank:acc:YP_950451;genbank:gi:119953652;genbank:GeneID:4643092 Probab=99.55 E-value=3.1e-13 Score=89.14 Aligned_cols=369 Identities=11% Similarity=0.030 Sum_probs=203.7 Q ss_pred c-hhhHhhcccccccc-----cc---ccccccc----cc-chhhhhhhhcCCCCcccch------hhhhcchHHHHHHHH Q lcl|Aclame:pro 3 L-PILNFINQTNDPPE-----VG---SVQSYFP----DG-NDAQIMESLLGDNNEWVSA------RAALRNSDLFSIILQ 62 (392) Q Consensus 3 M-g~~~~~~~~~~~~~-----~~---~~~~~~~----~~-~~~~~~~~~~~~~~~~v~~------~~a~~~~~v~~~i~~ 62 (392) | .|++...+.-.... .. .....+. .+ +.......+....+..+.. +...+.+.|.+|++. T Consensus 1 ~~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~iLr~a~~gd~~~~~~L~e~m~e~D~~i~s~l~~ 80 (526) T protein:vir:99 1 MAQIVDVYGNPIRTQQLREPQTSRLAGLAKEFAQHPAKGLTPAKLARILVEAEQGNLQAQAELFMDMEERDAHLFAEMSK 80 (526) T ss_pred CCeeECCCCCccccccccchhhhhhhhhhhhhcccCcCCCCHHHHHHHHHhhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 5 34454433222110 01 1111110 11 1111112222222222221 111257899999999 Q ss_pred HHHhhhhCceeeeccccc---------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCC---ceEEEEEeccc Q lcl|Aclame:pro 63 LSSDLAIVKINAEKKKNQ---------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANG---ADMKWEYLRPS 130 (392) Q Consensus 63 ia~~ia~~p~~~~~~~~~---------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G---~~~~l~~l~~~ 130 (392) +...|.+++|.|...... .+...=+......+++..+. +.+++|-+..++++..+| .|..+.+.++. T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~~~~~~i~~~l-da~~~G~s~~Eivw~~~~g~~~~~~l~~r~~~ 159 (526) T protein:vir:99 81 RKRAILGLDWAVEPPRNASAAEKADADYLHELLLDLEGLEDLLLDAL-DGIGHGYSCIELEWALQGREWMPLAFHHRPQS 159 (526) T ss_pred HHHHHhCCCceEecCCCCCHHHHHHHHHHHHHHhcccCHHHHHHHHH-HhhhhcceeEEEEEeecCCceeEEEeeeeccc Confidence 999999999999743211 11111111112455555554 466899999999865543 47789999998 Q ss_pred cceeeecCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCc Q lcl|Aclame:pro 131 QVNTYYFEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNV 210 (392) Q Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~ 210 (392) ++.+..+.. ..... .++...+ ..+++..++..++....+..+|.|.+..+.-.........++...|.+.-|.| T Consensus 160 ~f~~~~~~~--~~l~~--~~~~~~g--~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~yG~P 233 (526) T protein:vir:99 160 WFQLNPEDQ--NELRL--RDNSPAG--EALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLEIYGLP 233 (526) T ss_pred ceeeccCCC--cEEEe--cCCCCCc--eeecCCCeEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHHHcCCc Confidence 877654332 22211 1222222 34566655555566667778899999999999999999999999999999999 Q ss_pred ceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccCh-hhHHHHHHHHHHHHHHHHHhcccHHHcCCc Q lcl|Aclame:pro 211 PGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKS-NVAQLLSQTDWTSKQYAKVYGLPDSYIGGQ 289 (392) Q Consensus 211 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~-~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~ 289 (392) --+.+++.+.+++++. .+.+......+ ...++++.|++++-+..+. ....|.+..++..++|+.++ ||++ T Consensus 234 ~~igky~~~a~~~ek~--~L~~av~~i~~-d~~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i------LGqt 304 (526) T protein:vir:99 234 IRLGKYPPGTADEEKA--TLLRAVTGLGH-AAAGIIPETMAIDFQQAAQGSSEPFLAMMRQSEDAISKAV------LGGT 304 (526) T ss_pred eEEEecCCCCCHHHHH--HHHHHHHHHhh-CcEEEecCCceeEEeecCCCCHHHHHHHHHHHHHHHHHHH------hhhh Confidence 9999988765554432 22222222111 2356777777666555432 22347778888889988764 3322 Q ss_pred c------cccchH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----------------hcccchhhhhcchHHHHH Q lcl|Aclame:pro 290 G------DQQSSI---QQISGMYASALNRYLRPAISELEYKLSDH-----------------ISVNMRPAIDPLGDNYLS 343 (392) Q Consensus 290 ~------~~~~~~---~~~~~~~~~~l~p~l~~i~~~l~~~l~~~-----------------~~~d~~~~~~~~~~~~~~ 343 (392) - +.+++. +....-..+.++-.++.+++.||+.|.+. +.|+.. -..|.+.+++ T Consensus 305 lTs~~~~g~~gS~a~g~vh~~v~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~~--e~eDl~~~a~ 382 (526) T protein:vir:99 305 LTSTTSQSGGGAFALGQVHNEVRHDLLASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDLR--EQADITSMAQ 382 (526) T ss_pred hccccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCCC--CcccHHHHHH Confidence 1 111221 22233455677778899999998876432 122221 1234566788 Q ss_pred HHHHHHhCCC-cCHHHHHHHHHhCCCC-cc-ccccccCCCCC----C-CCC-------C---CCCCC Q lcl|Aclame:pro 344 TISTATRWGA-LAENQATFVLQEAGYI-PK-DLPAPENTNKK----T-TGQ-------S---NEPVP 392 (392) Q Consensus 344 ~~~~~~~~g~-~T~nE~R~~l~~~g~~-~~-e~~~~e~~~~~----~-~gd-------~---~~p~p 392 (392) .+..+...|+ ++..++|+.+ |++ |. +-+.+....+. . .+. . ..|.+ T Consensus 383 ~~~~L~~~G~~i~~~~i~e~~---Gip~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (526) T protein:vir:99 383 SIPALVNVGLEIPSAWVYDKL---GIPQPAKNEPVLRSAAQPAILSRQHGQRVAALATIVGPRYGDQ 446 (526) T ss_pred HHHHHHhCCCccCHHHHHHHh---CCCCCCCcccccCCCCCCcccccccccccccccccccccCcch Confidence 8999999997 8889999987 553 21 11111110000 0 000 0 00000 No 124 >protein:vir:1986 Length: 512 # NCBI annotation: Hypothetical protein # Family: family:all:313 # MgeID: mge:320 # MgeName: Mu # Cross-refs: genbank:acc:NP_050633;genbank:gi:9633520;genbank:GeneID:2636304 Probab=99.53 E-value=5.3e-13 Score=87.88 Aligned_cols=367 Identities=11% Similarity=-0.002 Sum_probs=203.7 Q ss_pred c-hhhHhhccccccccccc--------cccc-----ccccchhhhhhhhcCCCCcccc------hhhhhcchHHHHHHHH Q lcl|Aclame:pro 3 L-PILNFINQTNDPPEVGS--------VQSY-----FPDGNDAQIMESLLGDNNEWVS------ARAALRNSDLFSIILQ 62 (392) Q Consensus 3 M-g~~~~~~~~~~~~~~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~~v~------~~~a~~~~~v~~~i~~ 62 (392) | .|++...+.-....... .... ....+.......+....+..+. .+..++.+.|.+|++. T Consensus 1 m~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~iL~~a~~gd~~~~~~L~~dm~~~D~hi~s~l~~ 80 (512) T protein:vir:19 1 MGRILDISGQPFDFDDEMQSRSDELAMVMKRTQEHPSSGVTPNRAAQMLRDAERGDLTAQADLAFDMEEKDTHLFSELSK 80 (512) T ss_pred CcceeCCCCCccccccccccccchhcccchhhccccccCCCHHHHHHHHHHhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 5 45554443322111110 1011 1111111111222222222222 1223467899999999 Q ss_pred HHHhhhhCceeeecccc----c-c--------ccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeecc---CCceEEEEE Q lcl|Aclame:pro 63 LSSDLAIVKINAEKKKN----Q-G--------IIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNA---NGADMKWEY 126 (392) Q Consensus 63 ia~~ia~~p~~~~~~~~----~-~--------~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~---~G~~~~l~~ 126 (392) +-..|.+++|.|....+ . . +...| ...+++..+. +.+++|-+..++++.. ...|..+.+ T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~----~f~~~~~~ll-dA~~~G~s~~Ei~w~~~~g~~~~~~~~~ 155 (512) T protein:vir:19 81 RRLAIQALEWRIAPARDASAQEKKDADMLNEYLHDAA----WFEDALFDAG-DAILKGYSMQEIEWGWLGKMRVPVALHH 155 (512) T ss_pred HHHHHhCCCceEecCCCCCHHHHHHHHHHHHHHhcCC----CHHHHHHHHH-hhhhhcceeeeeEeeeeCCceeeeeeee Confidence 99999999999974221 0 1 11223 2455555554 4667999999997643 345788999 Q ss_pred eccccceeeecCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHc Q lcl|Aclame:pro 127 LRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNS 206 (392) Q Consensus 127 l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~n 206 (392) .++.++.+..+... .+.. .++.. ....+++..++..++....+..+|.|.+..+.-.........++...|.+. T Consensus 156 r~~~~f~~~~~~~~-~lr~---~~~~~--~G~~l~~~k~i~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E~ 229 (512) T protein:vir:19 156 RDPALFCANPDNLN-ELRL---RDASY--HGLELQPFGWFMHRAKSRTGYVGTNGLVRTLIWPFIFKNYSVRDFAEFLEI 229 (512) T ss_pred eccccceeccCCCc-EEEe---cCCCC--CceeecCCceEEEeccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 99988876544322 2211 11111 224567777776676677788899999999999999999999999999999 Q ss_pred CCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccCh-hhHHHHHHHHHHHHHHHHHhcccHHH Q lcl|Aclame:pro 207 SLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKS-NVAQLLSQTDWTSKQYAKVYGLPDSY 285 (392) Q Consensus 207 g~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~-~d~~~~e~~~~~~~~Ia~~fgVP~~~ 285 (392) -|.|--+.+++.+.+++++. .+.+......+ ...++++.|++++-+..+. ....|.+..++..++|+.+ + T Consensus 230 yG~P~~igky~~~a~~~ek~--~L~~al~~~~~-~a~~iiP~~~~ie~~ea~~~~~~~y~~li~~~d~~Isk~------i 300 (512) T protein:vir:19 230 YGLPMRVGKYPTGSTNREKA--TLMQAVMDIGR-RAGGIIPMGMTLDFQSAADGQSDPFMAMIGWAEKAISKA------I 300 (512) T ss_pred cCCCeeEEecCCCCCHHHHH--HHHHHHHHHhh-CcEEEecCCceEEEeecCCCCHHHHHHHHHHHHHHHHHH------H Confidence 99998888887765555432 22222222111 2456777777766655432 3334788889999999887 3 Q ss_pred cCCc--cc--cc---chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-cccch----------hhh----hcchHHHHH Q lcl|Aclame:pro 286 IGGQ--GD--QQ---SSIQQISGMYASALNRYLRPAISELEYKLSDHI-SVNMR----------PAI----DPLGDNYLS 343 (392) Q Consensus 286 lg~~--~~--~~---~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~~-~~d~~----------~~~----~~~~~~~~~ 343 (392) +|++ +. ++ +..+.......+.++-.++.+++.||+.|.+.+ .++.. ..+ ..|.+..+. T Consensus 301 LGqtlTs~~g~~Gs~a~~~vh~ev~~di~~aDa~~i~~tln~~li~~l~~~N~~~~~~~~~~p~~~f~~~e~eDl~~~a~ 380 (512) T protein:vir:19 301 LGGTLTTEAGDKGARSLGEVHDEVRREIRNADVGQLARSINRDLIYPLLALNSDSTIDINRLPGIVFDTSEAGDITALSD 380 (512) T ss_pred hhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEecCCChhhHHHHHH Confidence 5532 11 11 111223444567777889999999998775422 11110 011 123344555 Q ss_pred HHHHHHhCCCcCHHHHHHHHHhCCCC-ccc---cccccCCCCCCCCCC-----CCCCC Q lcl|Aclame:pro 344 TISTATRWGALAENQATFVLQEAGYI-PKD---LPAPENTNKKTTGQS-----NEPVP 392 (392) Q Consensus 344 ~~~~~~~~g~~T~nE~R~~l~~~g~~-~~e---~~~~e~~~~~~~gd~-----~~p~p 392 (392) .+..+..+--++..++|+.+ |++ |.+ +.......+..++.. .+..| T Consensus 381 ~~~~l~~G~~i~~~~i~e~~---Gip~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (512) T protein:vir:19 381 AIPKLAAGMRIPVSWIQEKL---HIPQPVGDEAVFTIQPVVPDNGSQKEAALSAEDIP 435 (512) T ss_pred HHHHHhcCCCCCHHHHHHHh---CCCCCCCccccccCCCccccccccccccccccCCC Confidence 66666544457888889887 543 211 111111111111100 11111 No 125 >protein:vir:79233 Length: 526 # NCBI annotation: portal protein # Family: family:all:313 # MgeID: mge:1867 # MgeName: Phage MP22 # Cross-refs: genbank:acc:YP_001469155;genbank:gi:157834998;genbank:GeneID:5648814 Probab=99.51 E-value=6.7e-13 Score=87.33 Aligned_cols=369 Identities=11% Similarity=0.048 Sum_probs=204.4 Q ss_pred c-hhhHhhcccccccc--------cccccccc----cccchh-hhhhhhcCCCCcccc------hhhhhcchHHHHHHHH Q lcl|Aclame:pro 3 L-PILNFINQTNDPPE--------VGSVQSYF----PDGNDA-QIMESLLGDNNEWVS------ARAALRNSDLFSIILQ 62 (392) Q Consensus 3 M-g~~~~~~~~~~~~~--------~~~~~~~~----~~~~~~-~~~~~~~~~~~~~v~------~~~a~~~~~v~~~i~~ 62 (392) | .|++...+.-+... .+.....+ ..+..+ .....+....+..+. .+...+.+.|.+|++. T Consensus 1 ~~~~~d~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gltp~~l~~il~~a~~gd~~~~~~L~edm~e~D~~i~s~l~~ 80 (526) T protein:vir:79 1 MAQIVDVYGNPIRPQQLREPQTSRLAGLAKEFAQHPAKGLTPAKLARILVEAEQGNLQAQAELFMDMEERDAHLFAEMSK 80 (526) T ss_pred CCeeeCCCCCccCccccchhhhhhhhhhhhhcccCCCCCcCHHHHHHHHHHhhCCCHHHHHHHHHHHHhhChHHHHHHHH Confidence 5 44554433222111 11111111 011111 111222211111121 1111257899999999 Q ss_pred HHHhhhhCceeeeccccc---------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCC---ceEEEEEeccc Q lcl|Aclame:pro 63 LSSDLAIVKINAEKKKNQ---------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANG---ADMKWEYLRPS 130 (392) Q Consensus 63 ia~~ia~~p~~~~~~~~~---------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G---~~~~l~~l~~~ 130 (392) +-..|.+++|.|...... .+...=+......+++..+.. .+++|-+..++++..+| .|..+.+.++. T Consensus 81 Rk~av~~~~w~I~p~~~~~~~~~~~a~~v~~~l~~~~~~~~~i~~~ld-A~~~G~s~~Ei~w~~~~g~~~~~~l~~r~~~ 159 (526) T protein:vir:79 81 RKRAILGLDWAVEPPRNASAAEKADADYLHELLLDLEGLEDLLLDALD-GIGHGYSCIELEWALQGREWMPLAFHHRPQS 159 (526) T ss_pred HHHHHhCCCceEecCCCCChHHHHHHHHHHHHHhcccCHHHHHHHHHh-hhhhcceeEEEEEeecCCceeEEEeeeeccc Confidence 999999999999743211 111111111124455444444 56799999999866543 47788899998 Q ss_pred cceeeecCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCc Q lcl|Aclame:pro 131 QVNTYYFEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNV 210 (392) Q Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~ 210 (392) +..+..+. +.... +. ++... ...+++..++..++....+..+|.|.+..+.-.........++...|.+.-|.| T Consensus 160 ~F~~~~~~--~~~l~-~~-~~~~~--g~~l~~~k~iv~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~F~E~yG~P 233 (526) T protein:vir:79 160 WFQLNPED--QNELR-LR-DNSPA--GEALQPFGWIIHRPRARSGYVARSGLFRVLAWPYLFRHYATSDLAEMLEIYGLP 233 (526) T ss_pred ceEeccCC--CcEEE-ec-CCCCC--ceeecCCceEEEeecCCcCCccccchHHHHHHHHHHHHhhHHHHHHHHHHcCCc Confidence 87754433 22221 11 11122 245666766655666677788999999999999999999999999999999999 Q ss_pred ceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccCh-hhHHHHHHHHHHHHHHHHHhcccHHHcCCc Q lcl|Aclame:pro 211 PGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKS-NVAQLLSQTDWTSKQYAKVYGLPDSYIGGQ 289 (392) Q Consensus 211 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~-~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~ 289 (392) --+.+++.+.+++++. .+.+......+ ...++++.|++++-+..+. ....|.+..++..++|+.+. ||++ T Consensus 234 ~~igky~~~a~~~ek~--~L~~av~~i~~-da~~iiP~~~~ie~~ea~~~~~~~f~~li~~~d~~Isk~i------LGqt 304 (526) T protein:vir:79 234 IRLGKYPPGTADEEKA--TLLRAVTGLGH-AAAGIIPETMAIDFQQAAQGSSEPFLAMMRQSEDAISKAV------LGGT 304 (526) T ss_pred eEEEecCCCCCHHHHH--HHHHHHHHHhc-CcEEEecCCceeEEeecCCCCHHHHHHHHHHHHHHHHHHH------hhhh Confidence 9899988765554432 22222222211 2456777777766655432 22347888889999998764 3321 Q ss_pred --c----cccchH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----------------hcccchhhhhcchHHHHH Q lcl|Aclame:pro 290 --G----DQQSSI---QQISGMYASALNRYLRPAISELEYKLSDH-----------------ISVNMRPAIDPLGDNYLS 343 (392) Q Consensus 290 --~----~~~~~~---~~~~~~~~~~l~p~l~~i~~~l~~~l~~~-----------------~~~d~~~~~~~~~~~~~~ 343 (392) + +++++. +-......+.++-.++.|++.||+.|.+. +.|+.. -..|.+.+++ T Consensus 305 lTs~~~~g~~gS~a~g~vh~~v~~di~~aDa~~i~~tln~~Li~~l~~~N~~~~~~~~~~p~~~~~~~--e~eDl~~~a~ 382 (526) T protein:vir:79 305 LTSTTSQSGGGAFALGQVHNEVRHDILASDARQLAATLSRDLLWPLLVLNRPGSPDVRRAPRLVFDLR--EQADITSMAQ 382 (526) T ss_pred hccccccCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCccccceEEeCCC--CcccHHHHHH Confidence 1 111121 22234456677778899999999877432 122221 1234566788 Q ss_pred HHHHHHhCCC-cCHHHHHHHHHhCCCC-ccc-cccccCCCCCC-----CCCCCC-------CCC Q lcl|Aclame:pro 344 TISTATRWGA-LAENQATFVLQEAGYI-PKD-LPAPENTNKKT-----TGQSNE-------PVP 392 (392) Q Consensus 344 ~~~~~~~~g~-~T~nE~R~~l~~~g~~-~~e-~~~~e~~~~~~-----~gd~~~-------p~p 392 (392) .+..+...|+ ++..++|+.+ |++ |.+ -+.+....+-. .+.... +.+ T Consensus 383 ~~~~L~~~G~~i~~~~i~e~~---gip~~~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (526) T protein:vir:79 383 SIPALVNVGLEIPSAWVYDKL---GIPQPAKNEPVLRPAAQPAILSRQHGQRVAALATIVGPRY 443 (526) T ss_pred HHHHHHhCCCcCCHHHHHHHh---CCCCCCCchhhccccCCccccccccccccccccccccccC Confidence 8999999987 8888889887 553 211 11111100000 000000 000 No 126 >protein:vir:95542 Length: 548 # NCBI annotation: Putative portal protein # Family: family:all:47 # MgeID: mge:1574 # MgeName: F10 # Cross-refs: genbank:acc:YP_001293348;genbank:gi:148912769;genbank:GeneID:5228194 Probab=99.51 E-value=1.2e-13 Score=91.36 Aligned_cols=385 Identities=11% Similarity=0.047 Sum_probs=202.6 Q ss_pred chhhHhhcccccccccc-------cccccccccchhhhhhhhc-CCC-Ccc----------cchhhhhcchHHHHHHHHH Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVG-------SVQSYFPDGNDAQIMESLL-GDN-NEW----------VSARAALRNSDLFSIILQL 63 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~-~~~----------v~~~~a~~~~~v~~~i~~i 63 (392) |+||+.+.+...|.... ....+...+. .....++. ..+ ... -+.+-+..++.+..||+.+ T Consensus 1 Mn~iDr~i~~~sP~~a~~R~~ar~~~~~y~aa~~-~r~~~~~~~~~s~~~~i~~~~~~lr~RaRdL~rNn~~a~~av~~~ 79 (548) T protein:vir:95 1 MNLIDRLLEPLAPELVARRLAAREAIQAYEAARP-GRTHKAKRQPLGADTSLQKSAVSMREQCRKLDEDHDLVTGLLDRL 79 (548) T ss_pred CchHHhHhhhcchHHHHHHHHhHHHhccccccCc-cccccccCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH Confidence 99998665544322111 0000000000 00111111 000 000 0112233468888999987 Q ss_pred HHhh-hh--Ccee--eeccc--------------cccccccC--CccCCHHHHHHHHHHHHHHhCCeeEEEeeccC---- Q lcl|Aclame:pro 64 SSDL-AI--VKIN--AEKKK--------------NQGIIDNP--STNANKHGFWQSMFAQLLLGGEAFAYRWRNAN---- 118 (392) Q Consensus 64 a~~i-a~--~p~~--~~~~~--------------~~~~~~~P--N~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~---- 118 (392) .+.+ ++ +-++ ....+ ...+..++ ...++.+++.+.++..++..|++|+.+.+... T Consensus 80 ~~nvVG~~G~~i~p~~l~~d~~~a~~l~~~ie~~w~~Wa~~~D~~g~~~f~~lq~l~~R~~~~dGE~f~~~~~~~~~~~~ 159 (548) T protein:vir:95 80 EERVVGGSGIGVEPLPLRLDGSVHAELAMEIRSAWAEWSLSPETSGELTRPQVERLMCRTWLRDGEGLAQKLMGRVPNYT 159 (548) T ss_pred HHhccCccccceeeeecCCCHHHHHHHHHHHHHHHHHhhcCccccccCCHHHHHHHHHHHHHhCCceEEEeeeccccccc Confidence 5554 43 2221 11111 11222333 34588999999999999999999998875432 Q ss_pred ---CceEEEEEeccccceeee-------------cCccceEEEEEEecCc-------ceeeeEEEeceeEEEecCCCccc Q lcl|Aclame:pro 119 ---GADMKWEYLRPSQVNTYY-------------FEYENGMYYNITFDDP-------KIEPILQAPQSDLIHMKLLSIDG 175 (392) Q Consensus 119 ---G~~~~l~~l~~~~v~~~~-------------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~vih~~~~~~~~ 175 (392) ..+..|..|+|+.+..-. |..|..+.|....... .......+++++|+|+......+ T Consensus 160 ~g~~~~~~lqliepd~l~~~~~~~~~~i~~GIE~D~~Grp~aY~i~~~hPgd~~~~~~~~~~~rvpA~~VlHif~~~r~g 239 (548) T protein:vir:95 160 FATSVPFALELLEPDYLPFSYNNLSKGIVQGIERDTWRRKRAYHLLKDHPGNLQTLGGSLAVKRVEAERIIHIAYRKRIG 239 (548) T ss_pred CCcccceEEEEechhhcCCCCCCCCCceeeeeEECCCCceEEEEEeecCCCcccccccccceeeechhHheecccccCCc Confidence 246789999998885432 3334444444433221 12235669999999999888888 Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCcee-eccCCceEee Q lcl|Aclame:pro 176 GKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPV-VLDDLEEFTA 254 (392) Q Consensus 176 ~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-vl~~g~~~~~ 254 (392) ...|+|.+..+...+.-.....+....-.+=.+...++|+.+............ .....-.-..|.++ .|..|.+++. T Consensus 240 Q~RGvs~lapvl~~l~~l~~y~dael~~aki~A~~a~fi~~~~~~~~~~~~~~~-~~~~~~~~~pG~iv~~L~pGe~i~~ 318 (548) T protein:vir:95 240 QNRGVPMLHAVLIRLADLKDYEESERVAARISAALAMYIKKGNPDSYTVEPGKD-RKNRTIPIAPGMVFDDLEPGEDVGM 318 (548) T ss_pred cccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCCccccCCCCcc-cccccccccCCccccccCCCceeee Confidence 899999999988777666655555544444444556777765432211100000 00000112245544 5889999998 Q ss_pred cccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccc-ccchH-HHHHHH-------HHHHHHHHHHHHHHH-HHHHhhh Q lcl|Aclame:pro 255 LEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGD-QQSSI-QQISGM-------YASALNRYLRPAISE-LEYKLSD 324 (392) Q Consensus 255 l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~-~~~~~-~~~~~~-------~~~~l~p~l~~i~~~-l~~~l~~ 324 (392) ++.+.-..+|.+..+...+.||+.+|||-+.|-+..+ ++++. .....+ -..++..+++||-+. |+..+.. T Consensus 319 ~~p~~p~~~~~~f~~~~lr~IAaglGipYe~ltgD~s~nYSS~R~~l~e~~r~~~~~q~~~i~~~~~Pi~~~wle~a~l~ 398 (548) T protein:vir:95 319 IESNRPNPFLEGFRNGQLRMIGAGTRSTYSSVSRAYDGTYSAQRQELVEGWLGYDLLQHEFIDYWCRPVYRSWLQMYLLA 398 (548) T ss_pred cCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc Confidence 8876556789999999999999999999998854322 22221 111111 123344556655444 2322221 Q ss_pred -hhcc----cchhhh----------hcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc----------------- Q lcl|Aclame:pro 325 -HISV----NMRPAI----------DPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD----------------- 372 (392) Q Consensus 325 -~~~~----d~~~~~----------~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e----------------- 372 (392) .+.+ +..... -.|....+.....++++|++|+-|+-+.. |..+.+ T Consensus 399 G~i~lP~~~~~~~~~~~~W~~P~~~~iDP~Kea~A~~~~i~~Gl~T~~~~~a~~---G~D~~ev~~q~a~E~~~~~~~GL 475 (548) T protein:vir:95 399 RKERLPADVDHRTLYAAVYQGPVMPWINPMHEANAWELLVKAGFADEAEVARAR---GRDPRELKKSRETEIKANRAAGL 475 (548) T ss_pred CCcCCCCCCCchhheeeeeecCCccccChHHHHHHHHHHHHcCCCCHHHHHHHh---CCCHHHHHHHHHHHHHHHHHcCC Confidence 1111 111111 12555666778889999999998765433 333322 Q ss_pred ----cccc----cCCCCCC-----CCCCCCCCC Q lcl|Aclame:pro 373 ----LPAP----ENTNKKT-----TGQSNEPVP 392 (392) Q Consensus 373 ----~~~~----e~~~~~~-----~gd~~~p~p 392 (392) .++. ....+.+ -.+...|.| T Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (548) T protein:vir:95 476 VFSSDAYHQLVKSGMDPVEAVQKVYLGVGKMLT 508 (548) T ss_pred CCCCcccccccccccCCCCchhhhccccccccc Confidence 1110 0011110 001111222 No 127 >protein:vir:79511 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1870 # MgeName: P74-26 # Cross-refs: genbank:acc:YP_001468055;genbank:gi:157265497;genbank:GeneID:5600628 Probab=99.50 E-value=4.2e-13 Score=88.44 Aligned_cols=366 Identities=13% Similarity=0.082 Sum_probs=193.2 Q ss_pred hccccccccc--cc---ccc-----------c-----ccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhh Q lcl|Aclame:pro 9 INQTNDPPEV--GS---VQS-----------Y-----FPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDL 67 (392) Q Consensus 9 ~~~~~~~~~~--~~---~~~-----------~-----~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~i 67 (392) +.++..+++. +. ... + +........-.-+.+..+..+. +..++.+.|.+|++.+...| T Consensus 1 m~k~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~ly-~~m~~D~hi~s~l~~Rk~av 79 (448) T protein:vir:79 1 MAKRGRKPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVY-HKMLSDGTVKNALNYIFGRI 79 (448) T ss_pred CCCCCCCCccccCcccccccccchhhhhhhhhhcccccccccccchhHhhccccchHHH-HHHhhChHHHHHHHHHHHHH Confidence 2121111111 00 000 0 0000000001111111222222 33456789999999999999 Q ss_pred hhCceeeeccccc-----------cccccCCcc---CCHHHHHHHHHHHHHHhCCeeEEEeec--cCCc--eEEEEEecc Q lcl|Aclame:pro 68 AIVKINAEKKKNQ-----------GIIDNPSTN---ANKHGFWQSMFAQLLLGGEAFAYRWRN--ANGA--DMKWEYLRP 129 (392) Q Consensus 68 a~~p~~~~~~~~~-----------~~~~~PN~~---~s~~~f~~~~~~~l~l~Gn~~~~i~r~--~~G~--~~~l~~l~~ 129 (392) .+++|.|...... ..+..++.. .++.+++.. +.+.+++|-++.++++. .+|+ +..+.+.++ T Consensus 80 ~~~~w~v~p~~~~~~~~~~ae~v~~~l~~~~~~~~~~~f~~~~~~-~lda~~~G~s~~Eivw~~~~~g~~~~~~l~~r~~ 158 (448) T protein:vir:79 80 RSAKWYVEPASTDPEDIAIAAFIHAQLGIDDASVGKYPFGRLFAI-YENAYIYGMAAGEIVLTLGADGKLILDKIVPIHP 158 (448) T ss_pred hcCCceEecCCCCHHHHHHHHHHHHHhhhhhhhhccCCHHHHHHH-HHHhhhhcceeEEEEeeecCCCceecccccccCC Confidence 9999999632211 112333322 234444433 34466899999999864 3564 445666666 Q ss_pred ccce-eeecCccceEEEEEEecC---cceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 130 SQVN-TYYFEYENGMYYNITFDD---PKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLN 205 (392) Q Consensus 130 ~~v~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 205 (392) .... +..+.+++.......... ........++..-++|... ...+..+|.|.+..+.-.........++...|.+ T Consensus 159 ~~~~~f~~~~d~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~-~~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E 237 (448) T protein:vir:79 159 FNIDEVLYDEEGGPKALKLSGEVKGGSQFVSGLEIPIWKTVVFLH-NDDGSFTGQSALRAAVPHWLAKRALILLINHGLE 237 (448) T ss_pred ccccceeeecCCceEEeecCCcccccccCCCccccccceEEEEec-CccCCcccchhHHHHHHHHHHHHHHHHHHHHHHH Confidence 5332 233344443333221110 0111234567788888765 4566788999999999999999999999999999 Q ss_pred cCCCcceEEEeCCCCCchHHHHHHHHHHH---hccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 206 SSLNVPGVLTVKGGGLLSDKDKASRSRSF---MKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLP 282 (392) Q Consensus 206 ng~~~~~il~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP 282 (392) .-|.|--+.+.+.+.++.++.++...+.. ....+ ..++++.|++++-+.......++.+..++..++|+.+. T Consensus 238 ~yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~~--a~~iiP~~~~ie~~ea~~~~~~~~~~i~~~d~~Isk~i--- 312 (448) T protein:vir:79 238 RFMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKPR--HGIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIARAL--- 312 (448) T ss_pred HcCCceEEEecCCCCCcCHHHHHHHHHHHHHHhcCCc--eEEEecCCceEEEEecCCCcccHHHHHHHHHHHHHHHH--- Confidence 99999888888876554444333333322 22223 24678888888777666555667788888888887764 Q ss_pred HHHcCCcc--c---ccchHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhhh--------------cccchhhhhcchHHH Q lcl|Aclame:pro 283 DSYIGGQG--D---QQSSIQ--QISGMYASALNRYLRPAISELEYKLSDHI--------------SVNMRPAIDPLGDNY 341 (392) Q Consensus 283 ~~~lg~~~--~---~~~~~~--~~~~~~~~~l~p~l~~i~~~l~~~l~~~~--------------~~d~~~~~~~~~~~~ 341 (392) ||.+. + ++++.+ .......+.++-.++.|++.||+.|.+.+ .|+.. -..|.+.+ T Consensus 313 ---LGqtlTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~li~~l~~lNfg~~~~~P~~~f~~~--e~~Dl~~~ 387 (448) T protein:vir:79 313 ---GIDFNTVQLNMGVQAINIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPSATRFPRLTFEME--ERNDFSAA 387 (448) T ss_pred ---hhhhhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcEEEecCC--ChHHHHHH Confidence 33211 1 111111 11233456677788999999998775422 22211 11233445 Q ss_pred HHHHHHHHhCCCcCHHHHHHHHHhCCCC---ccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 342 LSTISTATRWGALAENQATFVLQEAGYI---PKDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 342 ~~~~~~~~~~g~~T~nE~R~~l~~~g~~---~~e~~~~e~~~~~~~gd~~~p~p 392 (392) ++.+..++..+-.-.+-.|+.+ |.+ |.+.+.. ....+.-.+..+.| T Consensus 388 a~~~~~l~~~~~~~~~~~~~~~---~~p~~~~~~~~~a--~~~~~~~~~~~~~~ 436 (448) T protein:vir:79 388 ANLMGMLINAVKDSEDIPTELK---ALIDALPSKMRRA--LGVVDEVREAVRQP 436 (448) T ss_pred HHHhhhhhccchhhHHHHHHhh---cCCCCCCCccccc--cCCCCcccccccCC Confidence 5566666654422222234433 332 1111111 11111112223444 No 128 >protein:vir:77981 Length: 448 # NCBI annotation: portal protein # Family: family:all:2372 # MgeID: mge:1843 # MgeName: P23-45 # Cross-refs: genbank:acc:YP_001467939;genbank:gi:157265380;genbank:GeneID:5600471 Probab=99.46 E-value=2e-12 Score=84.67 Aligned_cols=369 Identities=14% Similarity=0.052 Sum_probs=194.6 Q ss_pred hcccccccccccccccccc---------------------cchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhh Q lcl|Aclame:pro 9 INQTNDPPEVGSVQSYFPD---------------------GNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDL 67 (392) Q Consensus 9 ~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~i 67 (392) +.++.++++.....+-... .+....-.-+....+..+. +..++.+.|.+|++.+...| T Consensus 1 m~kk~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~iLr~~~~~~ly-~~m~~D~hi~s~l~~Rk~av 79 (448) T protein:vir:77 1 MAKRGRKPKELVPGPGSIDPSDVPKLEGASVPVMSTSYDVVVDREFDELLQGKDGLLVY-HKMLSDGTVKNALNYIFGRI 79 (448) T ss_pred CCCCCCCCcccCCcccccchhhhhhhccchhhhcccccccccccchhHhhccccchHHH-HHHhhChHHHHHHHHHHHHH Confidence 2222222221111100000 0000001111112222222 33456799999999999999 Q ss_pred hhCceeeeccccc-----------cccccC---CccCCHHHHHHHHHHHHHHhCCeeEEEeec--cCCc--eEEEEEecc Q lcl|Aclame:pro 68 AIVKINAEKKKNQ-----------GIIDNP---STNANKHGFWQSMFAQLLLGGEAFAYRWRN--ANGA--DMKWEYLRP 129 (392) Q Consensus 68 a~~p~~~~~~~~~-----------~~~~~P---N~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~--~~G~--~~~l~~l~~ 129 (392) .+++|.|...... ..+..+ ....++.+++..+ .+.+++|-+..++++. .+|+ +..+.+.++ T Consensus 80 ~~~~w~v~p~~~~~~d~~~ae~v~~~l~~~~~~~~~~~f~~~i~~~-lda~~~G~s~~Eivw~~~~dg~~~~~~l~~r~~ 158 (448) T protein:vir:77 80 RSAKWYVEPASTDPEDIAIAAFIHAQLGIDDASVGKYPFGRLFAIY-ENAYIYGMAAGEIVLTLGADGKLILDKIVPIHP 158 (448) T ss_pred hcCCceEecCCCCHHHHHHHHHHHHHhhchhhhhccCCHHHHHHHH-HHhhhhcceeEEEEEeecCCCceeeccccccCC Confidence 9999998642211 111222 2233566666666 5778899999999864 3564 445666666 Q ss_pred ccce-eeecCccceEEEEEEec---CcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 130 SQVN-TYYFEYENGMYYNITFD---DPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLN 205 (392) Q Consensus 130 ~~v~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 205 (392) ..+. +..+.+++..+...... .........+|..-++|.... ..+..+|.|.+..+.-.........++...|.+ T Consensus 159 ~~~~~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~lP~~~~i~~~~~-~~g~p~g~gLlr~~~w~~~fK~~~~~~w~~f~E 237 (448) T protein:vir:77 159 FNIDEVLYDEEGGPKALKLSGEVKGGSQFVNGLEIPIWKTVVFLHN-DDGSFTGQSALRAAVPHWLAKRALILLINHGLE 237 (448) T ss_pred CccceeeeecCCceEEEecCCcccccccCCCccccccceEEEEecC-CcCCcccchHHHHHHHHHHHHHhhHHHHHHHHH Confidence 4332 22334444333221110 001112345678888888764 456788999999999999999999999999999 Q ss_pred cCCCcceEEEeCCCCCchHHHHHHHHHH---HhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 206 SSLNVPGVLTVKGGGLLSDKDKASRSRS---FMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLP 282 (392) Q Consensus 206 ng~~~~~il~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP 282 (392) .-|.|--+.+.+.+.++.++.++...+. .....++ .++++.|++++-++......++.+..++..++|+.+..-. T Consensus 238 ~yG~P~~vgky~~ga~~~~~~~~~l~~av~~i~~g~~a--~~iiP~g~~ie~~ea~~~~~~~~~~i~~~d~~Isk~iLGq 315 (448) T protein:vir:77 238 RFMIGVPTLTIPKSVRQGTKQWEAAKEIVKNFVQKPRH--GIILPDDWKFDTVDLKSAMPDAIPYLTYHDAGIARALGID 315 (448) T ss_pred HcCCceeEEecCCCCCCCHHHHHHHHHHHHHHhcCCce--EEEecCCceEEEEecCCCccCHHHHHHHHHHHHHHHHhcc Confidence 9999988888877655444433333332 2222333 4678888887776665555567778888888888765332 Q ss_pred HHHcCCcccccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-cccch-------hhh----hcchHHHHHHHHHHH Q lcl|Aclame:pro 283 DSYIGGQGDQQSSI-QQISGMYASALNRYLRPAISELEYKLSDHI-SVNMR-------PAI----DPLGDNYLSTISTAT 349 (392) Q Consensus 283 ~~~lg~~~~~~~~~-~~~~~~~~~~l~p~l~~i~~~l~~~l~~~~-~~d~~-------~~~----~~~~~~~~~~~~~~~ 349 (392) ---.+..+..++.. ..........++-.++.|++.||..|.+.+ .++.. ..+ ..|.+.+++.+..++ T Consensus 316 tlTs~~~~g~~~~~~~~~~~v~~~~~~aDa~~i~~tln~~Li~~l~~lNfg~~~~~P~~~f~~~e~eDl~~~a~~~~~l~ 395 (448) T protein:vir:77 316 FNTVQLNMGVQAVNIGEFVSLTQQTIISLQREFASAVNLYLIPKLVLPNWPGATRFPRLTFEMEERNDFSAAANLMGMLI 395 (448) T ss_pred ccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEecCCChhhHHHHHHHhHHHH Confidence 11111111111111 122234456677788999999998875432 22210 011 123333444444543 Q ss_pred hCCCcCHHHHHHHHHhCCCCc--cccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 350 RWGALAENQATFVLQEAGYIP--KDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 350 ~~g~~T~nE~R~~l~~~g~~~--~e~~~~e~~~~~~~gd~~~p~p 392 (392) +-.|+.+ |++. .+.+....-.+.+.....+|.| T Consensus 396 -------~~~~~~~---~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (448) T protein:vir:77 396 -------NAVKDSE---DIPTELKALIDALPSKMRRALGVVDEVR 430 (448) T ss_pred -------HHHHHHh---cCCccCCcCCCCCchhcccccCCCCCCC Confidence 2345444 4432 2222221111111111122222 No 129 >protein:vir:96738 Length: 505 # NCBI annotation: putative phage-related protein # Family: family:all:47 # MgeID: mge:1628 # MgeName: VP882 # Cross-refs: genbank:acc:YP_001039817;genbank:gi:126010916;genbank:GeneID:5076248 Probab=99.46 E-value=6.4e-13 Score=87.43 Aligned_cols=385 Identities=10% Similarity=0.028 Sum_probs=205.8 Q ss_pred CcchhhHhhccccccc----cc---ccccccccccchhhhhhhhc--CCCCc----------ccchhhhhcchHHHHHHH Q lcl|Aclame:pro 1 MILPILNFINQTNDPP----EV---GSVQSYFPDGNDAQIMESLL--GDNNE----------WVSARAALRNSDLFSIIL 61 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~--~~~~~----------~v~~~~a~~~~~v~~~i~ 61 (392) -+|.+++..-...-+. .+ +.+..-.+ +.....|.+-. ...+. .-+.+-+..++.+..+|+ T Consensus 6 ~~~~~~dr~i~~~~~~~~~~~~~~~~~y~aa~~-~r~~~~w~~~~~~~s~~~~i~~~~~~lr~RaRdL~rNn~~a~~av~ 84 (505) T protein:vir:96 6 KKPSLAQRMVNWAWYRYVEPQKNAARAFEAARR-DRLGKAWLRRASRLSADEEIYADLASLVQRAREQSINNPYAKRFYQ 84 (505) T ss_pred cccchhhcccchhhhhhHHHHHHhhhhcccccC-CCccccccCCCCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHH Confidence 5566665443321110 00 01110000 00001111000 00000 011223345688899999 Q ss_pred HHHHhh-hhCceeeecc------------------ccccccccCC----ccCCHHHHHHHHHHHHHHhCCeeEEEeeccC Q lcl|Aclame:pro 62 QLSSDL-AIVKINAEKK------------------KNQGIIDNPS----TNANKHGFWQSMFAQLLLGGEAFAYRWRNAN 118 (392) Q Consensus 62 ~ia~~i-a~~p~~~~~~------------------~~~~~~~~PN----~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~ 118 (392) .+.+.+ +..-++..-+ ....+...|| ..++..++.+.++..++..|++|+...+... T Consensus 85 ~~~~nvVG~~Gi~~~~~~~~~~~~~~~~~~~~ie~~w~~Wa~~~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~~~~~ 164 (505) T protein:vir:96 85 LLKNNVIGPKGMTFQSRVKRRNGKPDDRANTLIEGNWQQWIKKGNCDVTGRYHFVTLLHLWMETLARDGEVLVREHRGYP 164 (505) T ss_pred HHHHHhcCCCcceeeecCCcccccccHHHHHHHHHHHHHhcCCcCcceeccCCHHHHHHHHHHHHhhCCceEEEEeecCC Confidence 666655 4333333211 0122334455 3478899999999999999999998765433 Q ss_pred -CceEEEEEeccccceeee----------------cCccceEEEEEEecCc---------ceeeeEEEeceeEEEecCCC Q lcl|Aclame:pro 119 -GADMKWEYLRPSQVNTYY----------------FEYENGMYYNITFDDP---------KIEPILQAPQSDLIHMKLLS 172 (392) Q Consensus 119 -G~~~~l~~l~~~~v~~~~----------------~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~vih~~~~~ 172 (392) ..+..|..|+|+.+..-. +..|..+.|.+..... .......+++++|+|+.... T Consensus 165 ~~~~~~lqliepd~l~~~~n~~~~~~~~i~~GIe~d~~Gr~~aY~i~~~hPgd~~~~~~~~~~~~~rvpa~~vlH~f~~~ 244 (505) T protein:vir:96 165 NKWGYALQILECDRLDLNYNADLQNGNRIRMSIELDAWERPVAYHLLVNHPGDNSYCYHYAGQTYERVPADEIIHTFVPW 244 (505) T ss_pred CCcceEEEEechhhcCCCCCcccCCcCeEEeceEECCCCceEEEEEeecCCCccccccccccccccccCHhHhhhhhccc Confidence 346788999999885432 3334444444432211 11234458899999999888 Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch-HHHHHHHHHHHhccccCCceeeccCCce Q lcl|Aclame:pro 173 IDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS-DKDKASRSRSFMKRSRSGGPVVLDDLEE 251 (392) Q Consensus 173 ~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~vl~~g~~ 251 (392) ..+...|+|.+..+...+.-.....+....-.+=.+...++|+.+.+.... ..... ......-..|.+..|..|.+ T Consensus 245 r~gQ~RGis~lapvl~~l~~l~~y~dael~~a~i~A~~a~fi~~~~~~~~~~~~~~~---~~~~~~l~pG~i~~L~pGe~ 321 (505) T protein:vir:96 245 RPHQNRGIPWTHASMVELHHIGEYRKSEMIAAELGAKKVGFYEQDPEAYDQPPEDDQ---GEIVEEVEAGTYQLLPYGIR 321 (505) T ss_pred CCccccCcchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCccCCCcccccc---CccccccCCceeeecCCCCe Confidence 888999999999988777666655555544444445556777765432111 11000 00111234677889999999 Q ss_pred EeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcC-Cccc-ccchH-HHHHHH-------HHHHHHHHHHHHHHH-HHH Q lcl|Aclame:pro 252 FTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIG-GQGD-QQSSI-QQISGM-------YASALNRYLRPAISE-LEY 320 (392) Q Consensus 252 ~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg-~~~~-~~~~~-~~~~~~-------~~~~l~p~l~~i~~~-l~~ 320 (392) ++.++.+.-..+|.+..+...+.||+.+|||.+.|- ..++ ++++. .....+ -..++.++++||-+. |+. T Consensus 322 i~~~~~~~p~~~~~~f~~~~lr~iaaglgi~ye~lt~D~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~pi~~~~l~~ 401 (505) T protein:vir:96 322 FKEHKIDHPHTNFGAFVKSSLRGVAAGMGPAYNRLAHDLEGVNFSSLRSGELDERDLYKLLQFFVVTELLERVAGNLISM 401 (505) T ss_pred eeeeCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 999988766678999999999999999999999884 3222 22221 111111 123344566665554 333 Q ss_pred Hhhh-hhc---ccchhhh----------hcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccc--------cc--c Q lcl|Aclame:pro 321 KLSD-HIS---VNMRPAI----------DPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDL--------PA--P 376 (392) Q Consensus 321 ~l~~-~~~---~d~~~~~----------~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~--------~~--~ 376 (392) .+.. .+. ++..... -.|....++.....+++|++|+-|+-+.. |..+.++ .. . T Consensus 402 a~l~G~i~~p~~~~~~~~~~~w~~p~~~~iDP~Ke~~a~~~~i~~G~~t~~~~~a~~---G~D~~~v~~q~a~e~~~~~~ 478 (505) T protein:vir:96 402 SLLTQALPLNMVDIDRLSQYAFQPRGWDWVDPAKDSKAHSESIKNRTRSRSSIIRAA---GDDPEDVFDEIAWEEQLMRD 478 (505) T ss_pred HHHcCCcCCCCccchhhceeeeccCCccccChHHHHHHHHHHHHcCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHH Confidence 3221 111 1111111 12555667778889999999998764432 5444321 00 0 Q ss_pred cCCCCCC---------CCCCCCCCC Q lcl|Aclame:pro 377 ENTNKKT---------TGQSNEPVP 392 (392) Q Consensus 377 e~~~~~~---------~gd~~~p~p 392 (392) -++.+.. ..++..+.+ T Consensus 479 ~Gl~~~~~~~~~~~~~~~~~~~~~~ 503 (505) T protein:vir:96 479 KGVNPTPPEQESKDATTDEEDDSAS 503 (505) T ss_pred cCCCCCCCCCCCCCCCCCCCCCCCC Confidence 1111110 011111111 No 130 >protein:vir:6382 Length: 553 # NCBI annotation: portal protein Lambda B # Family: family:all:47 # MgeID: mge:133 # MgeName: BcepNazgul # Cross-refs: genbank:acc:NP_918995;genbank:gi:34610170;genbank:GeneID:2559575 Probab=99.44 E-value=1.7e-12 Score=85.11 Aligned_cols=392 Identities=8% Similarity=-0.005 Sum_probs=197.9 Q ss_pred CcchhhHhhccccc--cccccc--ccccccccc-hhhhhhhhc--CCCCcc----------cchhhhhcchHHHHHHHHH Q lcl|Aclame:pro 1 MILPILNFINQTND--PPEVGS--VQSYFPDGN-DAQIMESLL--GDNNEW----------VSARAALRNSDLFSIILQL 63 (392) Q Consensus 1 m~Mg~~~~~~~~~~--~~~~~~--~~~~~~~~~-~~~~~~~~~--~~~~~~----------v~~~~a~~~~~v~~~i~~i 63 (392) |.=..-+.+..... +..+.. .......+. ......|.. ...... -..+-...++.+..+|+.+ T Consensus 1 m~~~~~r~~~~~a~~~~~~~~~~~~~~y~gA~~~~r~~~~w~~~~~s~~~~~~~~~~~lr~RaRdL~rNn~~a~~av~~~ 80 (553) T protein:vir:63 1 MTKVTVRKLSEVTSGRPEQSASLGGGGLEGASRLSRETVSWNPSLRSPDALINPLKRIADARGRDMADNDGFTNGAVGYQ 80 (553) T ss_pred CcchhhhhhcccccccchhhhhhhcccccccccCCCcccccccCCCChHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH Confidence 21111111111110 000000 000000000 000011111 000001 1122333568888999977 Q ss_pred HHhhhhCceeeeccc-----------------------cccccccCC------ccCCHHHHHHHHHHHHHHhCCeeEEEe Q lcl|Aclame:pro 64 SSDLAIVKINAEKKK-----------------------NQGIIDNPS------TNANKHGFWQSMFAQLLLGGEAFAYRW 114 (392) Q Consensus 64 a~~ia~~p~~~~~~~-----------------------~~~~~~~PN------~~~s~~~f~~~~~~~l~l~Gn~~~~i~ 114 (392) ...+-.--+++.-+. ...+...|| ..++.+++.+.++..++..|++|+.+. T Consensus 81 ~~nvVG~Gi~~~~~~~~~~l~g~~~~~~~~~~~~ie~~w~~wa~~~~~~~D~~g~~~f~~~q~l~~r~~~~dGE~~~~~~ 160 (553) T protein:vir:63 81 RDSIVGAQYRLNSMPDINVIPGATEEWAEEYQTIVEAKFELYAESLACYIDNAAISTFTGLIRLGVVGYVKTGEVLATAE 160 (553) T ss_pred HHhhccCCceeeeccchhhhcCCCHHHHHHHHHHHHHHHHHhcCCccceeeccccCCHHHHHHHHHHHHHhCCceEEEee Confidence 776644455543211 112233443 457888999999999999999999876 Q ss_pred eccC-C--ceEEEEEeccccceeeec--------------CccceEEEEEEecCcce--------------eeeEEEece Q lcl|Aclame:pro 115 RNAN-G--ADMKWEYLRPSQVNTYYF--------------EYENGMYYNITFDDPKI--------------EPILQAPQS 163 (392) Q Consensus 115 r~~~-G--~~~~l~~l~~~~v~~~~~--------------~~~~~~~~~~~~~~~~~--------------~~~~~~~~~ 163 (392) +... | .+..|..|+|+.+....+ ..|..+.|.+.....+. .....++.. T Consensus 161 ~~~~~~~~~~~~lq~ie~drl~~~~~~~~~~~i~~GVE~d~~Gr~vaY~i~~~hPgd~~~~~~~~~~~~r~~~~~~v~a~ 240 (553) T protein:vir:63 161 WDRAANRPYATCFQMVSTDRLSNPYQQLDTPTLRRGVQYDKRGRPQGYWIQVAHPGDLYQMAPDMYKWKFVQQSKPWGRR 240 (553) T ss_pred eccCCCCcccceEEEechhhcCCCCCCCCCCeeEeeeEECCCCceEEEEeeccCCCccccccccccceeeeccccccChh Confidence 5432 2 256888999988865432 33334444332221110 112357899 Q ss_pred eEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHH----------------- Q lcl|Aclame:pro 164 DLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKD----------------- 226 (392) Q Consensus 164 ~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~----------------- 226 (392) +|||+......+...|+|.+..+...+.-.....+....-.+=.+...++|+.+.+.....+. T Consensus 241 ~vlH~f~~~r~gQ~RGis~lapvl~~l~~l~~y~daeL~~a~i~A~~a~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (553) T protein:vir:63 241 QVIHILEPREPDQSRGIADIVSGLKDMRMAKRFKEMSLQNAVINASYAAAIESELPPEFIHSQMSGGSPNADMVGIFGKY 320 (553) T ss_pred HheecccccCCCcccCCchHHHHHHHHHHHhHHHHHHHHHHHHhhhheeeeecCCChhhhhhhccccccccccccccccc Confidence 999999888888899999999988777666555554444444444556677754321111000 Q ss_pred HHHHHHHHhc----cccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHc-CCccc-ccchH-HHH Q lcl|Aclame:pro 227 KASRSRSFMK----RSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGD-QQSSI-QQI 299 (392) Q Consensus 227 ~~~~~~~~~~----~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~-~~~~~-~~~ 299 (392) .......+.+ .-..|.+..|..|.+++-++.+-...+|.+..+...+.||+.+|||.+.| |..++ ++++. ... T Consensus 321 ~~~~~~~~~~~~~~~l~pG~i~~L~pGe~i~~~~p~~p~~~~~~F~~~~lr~iaaglGi~Ye~lt~D~s~~nYSS~R~~~ 400 (553) T protein:vir:63 321 MDALKAYVGGANNIQIDGAKIPHLFPGTKLNLKPMGTPGGVGSEFEASLNRHLASAFGMSYEEFTRDFSKANYSSIQAGI 400 (553) T ss_pred ccccccccccccceeecCceeeecCCCCeeeecCCCCCCCCHHHHHHHHHHHHHhhcCCCHHHHhhhcccccHHHHHHHH Confidence 0000111111 12467888899999999988875567899999999999999999999977 43322 23321 111 Q ss_pred HHH-------HHHHHHHHHHHHHHH-HHHHhhh-hhcc---------cc----hhhh----------hcchHHHHHHHHH Q lcl|Aclame:pro 300 SGM-------YASALNRYLRPAISE-LEYKLSD-HISV---------NM----RPAI----------DPLGDNYLSTIST 347 (392) Q Consensus 300 ~~~-------~~~~l~p~l~~i~~~-l~~~l~~-~~~~---------d~----~~~~----------~~~~~~~~~~~~~ 347 (392) ..+ -..++..+++|+-+. |+..+.. .+.+ +. .... -.|...-...... T Consensus 401 ~e~~r~~~~~q~~~~~~~~~pi~~~wl~~a~l~G~i~~p~~~~~~~~~~p~~~~a~~~~~w~~p~~~~iDP~Ke~~A~~~ 480 (553) T protein:vir:63 401 AMTRRFLEGRKKMCADRLATEFFTLWLEEAIAAGEVPMPPGQTRDLFYQPLMKEALSKCEWIGASQGQIDQLKETQAAVM 480 (553) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccchhhcchhhhhhhhceeeecCCccccChHHHHHHHHH Confidence 111 122344456655444 2322221 1110 00 0000 1255556677888 Q ss_pred HHhCCCcCHHHHHHHHH------------------hCCCCccccccccCCC--CCCCCCCCCCCC Q lcl|Aclame:pro 348 ATRWGALAENQATFVLQ------------------EAGYIPKDLPAPENTN--KKTTGQSNEPVP 392 (392) Q Consensus 348 ~~~~g~~T~nE~R~~l~------------------~~g~~~~e~~~~e~~~--~~~~gd~~~p~p 392 (392) .+++|++|+-|+-+..+ +.|++.+-.+...... ....+.++.|.+ T Consensus 481 ~i~~G~~t~~~~~a~~G~D~~~v~~q~a~e~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (553) T protein:vir:63 481 RIDAGLSTYEREIARLGGDFRKSFAQRAREDALLKKYGLTFNLSAKRSLGDGRDAATGIAEDPAA 545 (553) T ss_pred HHHcCCCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCCCCCCccccCCCcccCCCCCCCCCC Confidence 99999999987654331 2233211111111000 011111111111 No 131 >protein:vir:10321 Length: 495 # NCBI annotation: ORF23 # Family: family:all:47 # MgeID: mge:182 # MgeName: VHML # Cross-refs: genbank:acc:NP_758916;genbank:gi:27311190;genbank:GeneID:956137 Probab=99.39 E-value=5.6e-12 Score=82.29 Aligned_cols=381 Identities=10% Similarity=0.042 Sum_probs=191.2 Q ss_pred chhhHhh-cccc----cccccccccccccccchhhhhhhhcCCC-Cc----------ccchhhhhcchHHHHHHHHHHHh Q lcl|Aclame:pro 3 LPILNFI-NQTN----DPPEVGSVQSYFPDGNDAQIMESLLGDN-NE----------WVSARAALRNSDLFSIILQLSSD 66 (392) Q Consensus 3 Mg~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~v~~~~a~~~~~v~~~i~~ia~~ 66 (392) |.++..- .... .+...+.+..- +... .+..+.+.+ .. .-..+-+..++.+..||+.+.+. T Consensus 1 m~~~~~~~~a~~~~~~~~~~~~~y~aa---~~~~-~~~~~~~~s~d~~~~~~~~~lr~RaRdl~rNn~~a~~av~~~~~~ 76 (495) T protein:vir:10 1 MNMTPSGYQSLASGLLVPVGASAYEGA---SGGH-RWQDIGDYGPDTAVASGIQTLRARSHHNVRNNPWATNAVATWVAA 76 (495) T ss_pred CCcccccccccchhhhhHHHhhhhhcc---ccCc-ccCCCCCCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHh Confidence 5555321 0000 00001111110 0000 011111100 00 01122233468888999988877 Q ss_pred hhhCceeeecc-c-----------cccccccC--CccCCHHHHHHHHHHHHHHhCCeeEEEeec--cCC--ceEEEEEec Q lcl|Aclame:pro 67 LAIVKINAEKK-K-----------NQGIIDNP--STNANKHGFWQSMFAQLLLGGEAFAYRWRN--ANG--ADMKWEYLR 128 (392) Q Consensus 67 ia~~p~~~~~~-~-----------~~~~~~~P--N~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~--~~G--~~~~l~~l~ 128 (392) +-.--++..-+ + ...+..++ ...++.+++.+.++..++..|++|+.+... ..| .+..|..++ T Consensus 77 vVG~Gi~p~~~~~~~~~~~~ie~~w~~wa~~~D~~g~~~f~~lq~l~~r~~~~dGE~f~~~~~~~~~~g~~~~~~lqlie 156 (495) T protein:vir:10 77 AVGNGLTPRWRMKEQELRQELQELWGDWVNEADFDEVQSFYGLQALVVRTVINSGEAFVIKKPRPLSEGLSVPLQLQIIE 156 (495) T ss_pred hcCCCcccccCCchHHHHHHHHHHHHHhhcCcccccccCHHHHHHHHHHHHHhCCceEEEEeecccCCCCccceEEEEec Confidence 73333433211 1 11223333 345889999999999999999999887643 233 478899999 Q ss_pred cccceeee-----------------cCccceEEEEEEecCcc-------eeeeEEEeceeEEEecCCCcccccccCCHHH Q lcl|Aclame:pro 129 PSQVNTYY-----------------FEYENGMYYNITFDDPK-------IEPILQAPQSDLIHMKLLSIDGGKTGISPLY 184 (392) Q Consensus 129 ~~~v~~~~-----------------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~ 184 (392) |+.+..-. +..|..+.|.+.....+ ......+++++|+|+.. ...+...|+|.+. T Consensus 157 pd~l~~~~~~~~~~~g~~i~~GIe~d~~Gr~vaY~i~~~hpgd~~~~~~~~~~~rvpA~~vlH~f~-~r~gQ~RGis~la 235 (495) T protein:vir:10 157 PDMLASDIPDETLPSGGYVKGGIRFSNGGKRKAYCFYRNHPAESSLIGDPVDTVWIKAEHVLHVTV-LTVRSDAGAPWFQ 235 (495) T ss_pred hhhcCCCCCCCCCCCCCEEEeceEECCCCceEEEEEeecCCCcccccccccceeeechhheEeccc-cCCCcccCcchhH Confidence 99886321 22333444443322211 12346689999999964 4567889999665 Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHH----HHHHHHHHhccccCCceeeccCCceEeecccChh Q lcl|Aclame:pro 185 SLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKD----KASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSN 260 (392) Q Consensus 185 ~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~ 260 (392) .+.. +.-.....+....-.+=.+...++|+.+......... ...-.......-..|.+..|..|.+++.++.+.. T Consensus 236 ~i~~-l~~l~~y~dael~~a~i~A~~~~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pG~i~~L~pGe~i~~~~p~~p 314 (495) T protein:vir:10 236 LLLR-LNELDQYEDAELVRKKTAALFAAFIQEATADSTGGPTIGQPKRSKGGKRITGLNPGTLQYLQPGQEVKFSNPADV 314 (495) T ss_pred HHHH-HHHhhHHHHHHHHHHHHhhhheeeeecCCCccccccccCccccccCcccceecCCceeeecCCCCeeeeeCCCCC Confidence 4432 3322222222222223333455667654322111110 0000000111224678889999999999887766 Q ss_pred hHHHHHHHHHHHHHHHHHhcccHHHc-CCccc-ccchH-----HHHHHH--HH-HHHHH-HHHHHHHH-HHHHhhh-hhc Q lcl|Aclame:pro 261 VAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGD-QQSSI-----QQISGM--YA-SALNR-YLRPAISE-LEYKLSD-HIS 327 (392) Q Consensus 261 d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~-~~~~~-----~~~~~~--~~-~~l~p-~l~~i~~~-l~~~l~~-~~~ 327 (392) ...|.+..+...+.||+.+|||.+.| |..++ ++++. +..+.+ .+ +.+.+ +++||-+. ++..+.. .+. T Consensus 315 ~~~~~~f~~~~lr~iaaglGi~Ye~ltgD~s~~nYSS~R~~~~e~~r~~~~~q~~~~~~~~~~pi~~~~l~~a~l~G~i~ 394 (495) T protein:vir:10 315 GTTYEPWLRYQLLSIAKGYGITYEMLTGDLRGVNYSSIRAGLLEFRRLCQQVQHHMIIHQFCRPVGRWFMDFAVASGAVV 394 (495) T ss_pred CCCHHHHHHHHHHHHHhhcCCCHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC Confidence 67789999999999999999999988 43322 23322 112222 12 22333 55665554 3333221 111 Q ss_pred c-----------cchh----hhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccc----------cccCC--- Q lcl|Aclame:pro 328 V-----------NMRP----AIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLP----------APENT--- 379 (392) Q Consensus 328 ~-----------d~~~----~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~----------~~e~~--- 379 (392) + ..++ .--.|....+.....++++|++|+-|+-+. .|..+.++- +.-++ T Consensus 395 ~p~~~~~~~~~~~~~w~~p~~~~vDP~Ke~~A~~~~i~~G~~s~~~~~a~---~G~D~~~v~~q~a~e~~~~~~~Gl~~~ 471 (495) T protein:vir:10 395 IPDYLQRRRYYNRVSWRTPRWEEVDPLKKHLADLGDVRAGFAPISDKQAE---RGYDMEELFDMISDANQLIDEYDLRLD 471 (495) T ss_pred CCCchhhhHhhhccccccCCccccChHHHHHHHHHHHHcCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHcCCCCC Confidence 1 0011 011255566677888999999999876443 254443310 00111 Q ss_pred --CCC--CCCCCCCCCC Q lcl|Aclame:pro 380 --NKK--TTGQSNEPVP 392 (392) Q Consensus 380 --~~~--~~gd~~~p~p 392 (392) +.. ..|..+++.+ T Consensus 472 ~~p~~~~~~~~~~~~~~ 488 (495) T protein:vir:10 472 SDPRYVNGSGAEQKSVM 488 (495) T ss_pred CCCCcCCCccCCCCCCC Confidence 111 1122223333 No 132 >protein:vir:105782 Length: 449 # NCBI annotation: gp5 # Family: family:all:6783 # MgeID: mge:1501 # MgeName: ES18 # Cross-refs: genbank:acc:YP_224143;genbank:gi:62362218;genbank:GeneID:3342535 Probab=99.32 E-value=7.1e-12 Score=81.69 Aligned_cols=362 Identities=11% Similarity=0.016 Sum_probs=165.7 Q ss_pred Cc-----chhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchh----hhhcchHHHHHHHHHHHhhh-hC Q lcl|Aclame:pro 1 MI-----LPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSAR----AALRNSDLFSIILQLSSDLA-IV 70 (392) Q Consensus 1 m~-----Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----~a~~~~~v~~~i~~ia~~ia-~~ 70 (392) |. |+|.|...+......+. |..+ +. ...++.+ .+-+++.+..+|+.++..+- +. T Consensus 16 ~~~~~~rd~l~~~~~glg~~r~~~--------------~~~~-g~-~~~~~~~~l~~~Yr~~~ia~~iVd~~~d~~~~~~ 79 (449) T protein:vir:10 16 ARMARARMGLMVPTMGLDNKRHSA--------------WCEY-GF-PELVTYENLYSLYRRGGIAHGAVEKLVGKCWQTN 79 (449) T ss_pred hHHHHHHHHHHHHHhcCCcccchh--------------hhhc-CC-cccCCHHHHHHHHhcCchhHHHHHhhhhhhhhcC Confidence 22 33333332222111111 1111 00 0112211 22356777889999988652 22 Q ss_pred ceeeeccccccccccCCc------cCCHHHHHHHHH---HHHHHhCCeeEEEe-ecc---------CCceEEEEEecccc Q lcl|Aclame:pro 71 KINAEKKKNQGIIDNPST------NANKHGFWQSMF---AQLLLGGEAFAYRW-RNA---------NGADMKWEYLRPSQ 131 (392) Q Consensus 71 p~~~~~~~~~~~~~~PN~------~~s~~~f~~~~~---~~l~l~Gn~~~~i~-r~~---------~G~~~~l~~l~~~~ 131 (392) |..+ ...........-. ......+|..+. ..-.++|-+++++. ++. .+.+..+.|+.... T Consensus 80 ~~i~-~g~~~~~~~~~~~~e~~~~~l~~~~~~~~l~ea~~~~rl~Gga~i~i~v~d~~~l~~Pl~~~~~i~~i~v~~~~~ 158 (449) T protein:vir:10 80 PEII-EGDDADDSEDETSWEKKSKQVFTNRLWRSFAEADRRRLVGRYAGILLHIRDEKDWNLPATKGRGLQKVSVSWAGS 158 (449) T ss_pred cccc-cCccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcEEEEEEecCCCCCCcccccCcceeeEEeecccc Confidence 2211 1111000000000 000012222222 12235676766653 332 23566777776665 Q ss_pred ceeee-------cCccceEEEEEEec-CcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHH-HHHHH Q lcl|Aclame:pro 132 VNTYY-------FEYENGMYYNITFD-DPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASD-RLTIS 202 (392) Q Consensus 132 v~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~-~~~~~ 202 (392) +++.. ..+|...+|.+... .+.....+.+.++.|+|+...+. -|.|.++.+...+.....+. -+... T Consensus 159 i~~~~~~~dp~sp~yg~P~~y~v~~~~~g~~~~~~~iH~SRl~~~~~~~~----~g~~~L~~~yn~l~~~~~~~~~~a~~ 234 (449) T protein:vir:10 159 LKVAEWDTGINSKTYGQPKLWKYTERLPNGSSRRVDIHPDRVFILGDYSE----DAIGFLEPAYNAFVSLEKVEGGSGES 234 (449) T ss_pred CChhhhhcCCCCCCCCCceEEEEeeeccCCCccceeeccceeEeecCCCC----CChhHHHHHHHHhhhHHHhhhhHHHH Confidence 55431 11233444444322 12223446788999998864432 37788888877553333322 23333 Q ss_pred HHHcCCCcceE-----------EEeCCCCCch-HHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHH Q lcl|Aclame:pro 203 SLNSSLNVPGV-----------LTVKGGGLLS-DKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDW 270 (392) Q Consensus 203 ~~~ng~~~~~i-----------l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~ 270 (392) +++|-.+...+ ....+...++ .+......+.... +. ..+.++.+-+|+.++.++.+. .+.... T Consensus 235 ~l~~~~rq~~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~~~~~~~~--~~-~~~~i~~~~d~~~~~~~~sgl--~d~l~~ 309 (449) T protein:vir:10 235 FLKNAARQLNVNFEKEIDFTNLASLYGVSIDELQDKFNEVAGEINR--GN-DVLMTTQGATVTPLVTSVADP--TATYNV 309 (449) T ss_pred HHHHHHHHHhhhhhhhhhhhhhhHHhhCCchHHHHHHHHHHHHHhc--cc-hheeecCCcceEEEecccCCh--hHHHHH Confidence 33332211111 1111111111 1111112222211 11 234567777899999887654 556777 Q ss_pred HHHHHHHHhcccHHHc-CCcccccchHHHHHHHHH------HHHHHHHHHHHHHHHHH-hh---hhhcccchhhhhcchH Q lcl|Aclame:pro 271 TSKQYAKVYGLPDSYI-GGQGDQQSSIQQISGMYA------SALNRYLRPAISELEYK-LS---DHISVNMRPAIDPLGD 339 (392) Q Consensus 271 ~~~~Ia~~fgVP~~~l-g~~~~~~~~~~~~~~~~~------~~l~p~l~~i~~~l~~~-l~---~~~~~d~~~~~~~~~~ 339 (392) ..++||++-|||...| |.+..+.++.+..+.||. .-+.|.++.+.+.|-+. ++ +++.+.+.++..++.+ T Consensus 310 ~~q~iaaa~~IP~t~L~Gqsp~glnst~D~~nyyd~i~~~Q~~l~p~le~l~~~l~~s~~g~~~~d~~i~f~pL~~~t~k 389 (449) T protein:vir:10 310 NLQTAAAGVDIPTRILIGNQQAERSSTEDQKYFNARCQSRRVDLSFEIEDFCDKLIELKIIDAVAKKAVIWDDLNEQTGT 389 (449) T ss_pred HHHHHHHHhCCCeeeeeccCccccccchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCCCCceeEEeCCCCCCCHH Confidence 7889999999999966 433322222233333332 23566666666555332 21 3466666677777777 Q ss_pred HHHH-------HHHHHHhCC---CcCHHHHHHHHHhCCCCccccccccCCCCCC-CCCCCC Q lcl|Aclame:pro 340 NYLS-------TISTATRWG---ALAENQATFVLQEAGYIPKDLPAPENTNKKT-TGQSNE 389 (392) Q Consensus 340 ~~~~-------~~~~~~~~g---~~T~nE~R~~l~~~g~~~~e~~~~e~~~~~~-~gd~~~ 389 (392) ++++ .+..++.+| +++.+|+|+.++..|...++.+..+ -++.. +.|.-. T Consensus 390 EkAei~k~~A~a~~~~~~ag~~~~~~~~EiR~~~~~~~~~~~~~~~e~-~de~~~~~d~~a 449 (449) T protein:vir:10 390 EKLTNAKTMGEINQTMLGSGDNPAFSREEIRTAAGYDNDDEEPLGEED-GDEEDKATDSAA 449 (449) T ss_pred HHHHHHHHHHHHHHHHHHccccCCcCHHHHHHHhcccCCCCCCCCCCC-CccccccCCcCC Confidence 6643 445666666 8999999998855443222211111 11111 111111 No 133 >protein:vir:98816 Length: 446 # NCBI annotation: hypothetical protein # Family: family:all:32558 # MgeID: mge:1530 # MgeName: Ma-LMM01 # Cross-refs: genbank:acc:YP_851097;genbank:gi:117530254;genbank:GeneID:4484480 Probab=99.31 E-value=9.1e-12 Score=81.11 Aligned_cols=365 Identities=10% Similarity=0.023 Sum_probs=203.2 Q ss_pred CcchhhHhhccccccccccccc-ccccccchhhhhhhhcCCCCcc------cchhhhhcchHHHHHHHHHHHhhhhCcee Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQ-SYFPDGNDAQIMESLLGDNNEW------VSARAALRNSDLFSIILQLSSDLAIVKIN 73 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------v~~~~a~~~~~v~~~i~~ia~~ia~~p~~ 73 (392) |-|-+-+.-.-....+..+... --...+.- .........|.. +..+...+.+.|.+|++.+...|.+++|. T Consensus 1 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~--~~D~~lr~~gg~~~~~~~l~~~m~e~D~~v~s~l~~Rk~av~~~~w~ 78 (446) T protein:vir:98 1 MNMEVRNAPTPAIRRRTIYAMEHLGLATSYL--SEDGGYKRAGKPTYQQLSAWDEAAQTEPIIAQGLDSIALSVLNKVGP 78 (446) T ss_pred CcccccCCCchhhhhhhhhccccchhhcccC--CcchHhhhcCCChHHHHHHHHHHHhcchHHHHHHHHHHHHhhcCCce Confidence 6665443111000000000000 00000000 001111112222 22222335799999999999999999999 Q ss_pred eeccccc------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC-C--ceEE----EEEeccccceeeecCcc Q lcl|Aclame:pro 74 AEKKKNQ------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN-G--ADMK----WEYLRPSQVNTYYFEYE 140 (392) Q Consensus 74 ~~~~~~~------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~-G--~~~~----l~~l~~~~v~~~~~~~~ 140 (392) |...+.. ..+..- ..++....+.+.+.+|-++.++++... | .|.. +..+.|..+....+.++ T Consensus 79 V~p~~~~~a~~v~~~l~~~-----~~~~~~~~~ldai~~G~s~~Eivw~~~~g~~~p~~~~d~~~~~~~~~~r~~~~~~~ 153 (446) T protein:vir:98 79 YQHGDKRIKKFIDDQLRNR-----AKTWISHCVKSIMTYGFSLSEQIYAHGARDNMPATVLDDIVNYHPLQVMLIANDNG 153 (446) T ss_pred ecCccHHHHHHHHHHHhhc-----CchhHHHHHHHHHhhCceeeeEEEeecccccccchhhccccccccccceeeeccCC Confidence 9754321 112111 123344457788899999999986532 2 1211 11122222222222221 Q ss_pred ceEEEEE----------------------EecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 141 NGMYYNI----------------------TFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDR 198 (392) Q Consensus 141 ~~~~~~~----------------------~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~ 198 (392) ..+.... .......+..+.+|...++++++....+..+|.|.+..+.-.........+ T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~iP~~kfi~~~~~~~~~~p~G~gLlr~~~w~~~fK~~~~~ 233 (446) T protein:vir:98 154 RIVDGDTVTASQYKSGYWVPLPPYRIGDPPKKVDVVGSHVRLPSHKRLFINYNTKGNNPWGTSCLTSVLDYSIFKRAFRD 233 (446) T ss_pred ccccccccchhhcccccccCcccchhhhhhhhcccCcccccccccceEEEEecCCCCCccccchHHHHHHHHHHHHhhHH Confidence 1110000 000011233456788888888888888888999999999999999999999 Q ss_pred HHHHHHHcCCCcceEEEeCCCCCchHH-------HH----HHHHHHHhccc-cCCcee---eccCCceEeecccChhh-H Q lcl|Aclame:pro 199 LTISSLNSSLNVPGVLTVKGGGLLSDK-------DK----ASRSRSFMKRS-RSGGPV---VLDDLEEFTALEIKSNV-A 262 (392) Q Consensus 199 ~~~~~~~ng~~~~~il~~~~~~~~~~~-------~~----~~~~~~~~~~~-~~g~~~---vl~~g~~~~~l~~~~~d-~ 262 (392) ....|.+.-|.|--+.+++.+.+..++ .. +.+.+...... .++.++ ++++|++++-++..... . T Consensus 234 ~w~~f~E~yG~P~~vGkyp~ga~~~~~~~~~~~~~~~~~~~~L~~av~~~~~da~~ii~~~~~P~g~eie~~ea~~~~~~ 313 (446) T protein:vir:98 234 MMLIALDRYGTPLIYVIVPPGNTGVVEEAPDGTEITTTIAEQAEDALRRLSTDSGLVLTQLSKEQPVQVGALTTGNNFSD 313 (446) T ss_pred HHHHHHhHcCCceeEEeecCCCCcccccchhHHHHHHHHHHHHHHHHHhccccceeeeecccCCCCceEEeeccccCChh Confidence 999999999999888888765443321 11 12333333322 233222 24889988877654332 3 Q ss_pred HHHHHHHHHHHHHHHHhcccHHHcCCccccc-ch--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-cccch------- Q lcl|Aclame:pro 263 QLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ-SS--IQQISGMYASALNRYLRPAISELEYKLSDHI-SVNMR------- 331 (392) Q Consensus 263 ~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~-~~--~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~~-~~d~~------- 331 (392) +|.+..++..++|+.+.....-.+|...+.. ++ .+.......+.++-.++.|++.+|+.|...+ .++.. T Consensus 314 ~~~~~i~~~d~~IskaiLg~~Ltl~~~~~~~GS~ala~vh~~V~~d~~~aDa~~i~~tln~~Li~~l~~lNf~~~~~~~~ 393 (446) T protein:vir:98 314 SFERAISLCDNNMLMGMGIPNLLVQNRETTFGTGRASEIQLELFDGKINSIFDTVIHAFTEQVIGNLIRLNFDPALYPLA 393 (446) T ss_pred hHHHHHHHHHHHHHHHHhcccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccc Confidence 5888889999999998877765565432222 21 1223345567778889999999998875432 22210 Q ss_pred -----hhh----hcchHHHHHHHHHHHhCCCcCH---HHHHHHHHhCCCCccccccccCC Q lcl|Aclame:pro 332 -----PAI----DPLGDNYLSTISTATRWGALAE---NQATFVLQEAGYIPKDLPAPENT 379 (392) Q Consensus 332 -----~~~----~~~~~~~~~~~~~~~~~g~~T~---nE~R~~l~~~g~~~~e~~~~e~~ 379 (392) ..+ ..|...+++.+..++..|+.++ +.+|+.+ |+++-+ +.. T Consensus 394 ~~~~~~~~~~~e~eDl~~~a~~~~~L~~~G~~~p~~~~~ire~~---giP~~~----~~~ 446 (446) T protein:vir:98 394 SNTGYITRLPGRATDLAALVEAIKQMHDMGFLVDGDKDHIRSIT---GLPDAI----SST 446 (446) T ss_pred cccccceeccCChhhHHHHHHHHHHHHhCCccccccHHHHHHHh---CcCCCC----CCC Confidence 011 2355667888889999998765 3477766 554311 011 No 134 >protein:vir:95254 Length: 488 # NCBI annotation: Phage conserved protein # Family: family:all:2372 # MgeID: mge:1561 # MgeName: Felix 01 # Cross-refs: genbank:acc:NP_944885;genbank:gi:158267601;genbank:GeneID:2744039 Probab=99.25 E-value=2.7e-10 Score=73.04 Aligned_cols=375 Identities=14% Similarity=0.089 Sum_probs=184.7 Q ss_pred chhhHhhcccccccccccccccccccchhhh----hhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVGSVQSYFPDGNDAQI----MESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKK 78 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~ 78 (392) |.=-.-...-..|..-+.+-.....+....+ ...+.+.....+ .+..++.+.|.+|++.+-..|.+++|.|.... T Consensus 1 ~~~~~~~~~gl~p~rl~~i~~~~~~~~~~~~~~~~~~~Lr~~~~~~l-y~~m~~D~hi~s~l~~Rk~av~~~~w~v~p~~ 79 (488) T protein:vir:95 1 MADITETQESLPPFRMGEVGSLGLKVKNGRIYEEPRQALRFPESIKT-FQLMMRDPAVAASVNIIKMFVRKVNWRFVPPK 79 (488) T ss_pred CCCccccCCCCCHHHHHHHHHHhhccccchhhccchhhhcccchHHH-HHHHhhChHHHHHHHHHHHHHhcCCceEecCC Confidence 1000000000000000000000000000000 011112122223 23345689999999999999999999997321 Q ss_pred c---c-------cccc--cCCccCCHHHHHHHHHHHHHHhCCeeEEEeecc-------------CCc--eEEEEEecccc Q lcl|Aclame:pro 79 N---Q-------GIID--NPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNA-------------NGA--DMKWEYLRPSQ 131 (392) Q Consensus 79 ~---~-------~~~~--~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~-------------~G~--~~~l~~l~~~~ 131 (392) . + ..+. --|...++.+++..+. +.+++|-+..++++.. +|. +..+.+-++.. T Consensus 80 ~~~~d~~~~~~a~~v~~~l~~~~~~~~~~i~~~l-da~~~G~s~~Eivw~~~~~~~~~~~~~~~dg~~~~~~i~~Rpq~~ 158 (488) T protein:vir:95 80 GKEQDPKMLERADFFNSLMDDMEHDWADFINSVM-SFCTYGFCVNEKVYKKRQGKKGKYQSKFDDGLIGWAKLPIRNQST 158 (488) T ss_pred CCchhHHHHHHHHHHHHHHhccCccHHHHHHHHH-HhhcccceeeeeeeeccccccccccccccCCeeeeeeeeecCccc Confidence 1 0 1111 1222345566666664 5678999999888643 232 44555555532 Q ss_pred ce-eeecCccceEEEEEEec-----------CcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 132 VN-TYYFEYENGMYYNITFD-----------DPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRL 199 (392) Q Consensus 132 v~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~ 199 (392) .+ +..+.+++......... .+.......++...+++.++....+..+|.|.+..+.-.........++ T Consensus 159 ~~~f~~d~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~kfi~~~~~~~~g~p~g~gLlr~~~w~~~fK~~~~~~ 238 (488) T protein:vir:95 159 LDKWYFDEDFRRVTGVRQNLRNVSHIAGAINLGERPLTRKLPRAKFMLFKYDDEYGNPEGRSPLLNAYVPWKYKVQIEEY 238 (488) T ss_pred ccceeeccCCCceeecccccccccccccccccccccccccccccceEEEeecCCCCccchhhHHHHHHHHHHHHHHHHHH Confidence 11 22333333322211100 0011233457777777666666677789999999999999888889999 Q ss_pred HHHHHHcCCCcceEEEeCCC--CCchHHHHHHHHHHH-------hccccCCceeeccCCceE---------eecccC-hh Q lcl|Aclame:pro 200 TISSLNSSLNVPGVLTVKGG--GLLSDKDKASRSRSF-------MKRSRSGGPVVLDDLEEF---------TALEIK-SN 260 (392) Q Consensus 200 ~~~~~~ng~~~~~il~~~~~--~~~~~~~~~~~~~~~-------~~~~~~g~~~vl~~g~~~---------~~l~~~-~~ 260 (392) ...|.+..+.|--+...+.. ....+...+.+.+.. .....+| ++++.|+.. +.++.. .. T Consensus 239 w~~f~Er~g~g~p~~~~p~~~~~~~~~~e~~~l~~a~~~i~~~~~~~~~ag--~iiP~g~~~~~k~~~~e~~l~~~~~~~ 316 (488) T protein:vir:95 239 EAVGVSRDLVGMPKIGLPPDYLDENAEPEKKAFVQYCKTVVNDMIANDRAG--LIWPRYIDPDTKEDIFEFSLVSRQGAK 316 (488) T ss_pred HHHHHHHhcccceeEeeccCCCCCcccHHHHHHHHHHHHHHHHhhccchhh--eeeccccccccchhhhhhhccccccCC Confidence 99999875555444444321 112222222111111 1111222 455555432 223332 22 Q ss_pred hHHHHHHHHHHHHHHHHHhcccHHHcCCc--c--cccchH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhhh------- Q lcl|Aclame:pro 261 VAQLLSQTDWTSKQYAKVYGLPDSYIGGQ--G--DQQSSI---QQISGMYASALNRYLRPAISELEYKLSDHI------- 326 (392) Q Consensus 261 d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~--~--~~~~~~---~~~~~~~~~~l~p~l~~i~~~l~~~l~~~~------- 326 (392) ...|.+..++..++|+.+. ||.+ + ..+++. +.......+.+.-.++.|++.||+.|.+.+ T Consensus 317 ~~~~~~li~~~d~~Isk~i------LGqtLT~~~~~~Gs~Al~~vh~ev~~~i~~aDa~~i~~tln~~li~~l~~~Nfg~ 390 (488) T protein:vir:95 317 AYDTGSIIDRYSKQIMMAF------MSDVLAMGQSKYGSFSLADSKTSLLAMSVDILLKQIKNVINRDLVAQTYALNMWD 390 (488) T ss_pred chhHHHHHHHHHHHHHHHH------hccccccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC Confidence 3346777788888887765 4431 1 111121 223445567777889999999998775432 Q ss_pred -------cccchhhhhcchHHHHHHHHHHHhCCCcCH-----HHHHHHHHhCCCCcc--ccccccCCCC----------- Q lcl|Aclame:pro 327 -------SVNMRPAIDPLGDNYLSTISTATRWGALAE-----NQATFVLQEAGYIPK--DLPAPENTNK----------- 381 (392) Q Consensus 327 -------~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~-----nE~R~~l~~~g~~~~--e~~~~e~~~~----------- 381 (392) .|+.. -..|.+.+++.+..++..|+.-+ +.+|+.+ |+++. +-+.....++ T Consensus 391 ~~~~P~~~~~~~--e~~Dl~~~ae~~~~L~~~G~~i~~~~~~~~i~e~~---gip~~~~~e~~~~~~~~~~~~~~~~~~~ 465 (488) T protein:vir:95 391 DEEHVQITYDDI--ETPDLEAIGSYIQKTVAVGALEVDKELSNKLREHI---GLPPADESQPVSEKLSPNSQSRSGDGYK 465 (488) T ss_pred CCCccEEEecCc--ChhhHHHHHHHHHHHHhCCCccccHHHHHHHHHHh---CCCCCCCCccccccCCCCCCCCCCcccC Confidence 22211 12344677888999999998765 4467665 55421 1111111111 Q ss_pred -CCCCCCCCCCC Q lcl|Aclame:pro 382 -KTTGQSNEPVP 392 (392) Q Consensus 382 -~~~gd~~~p~p 392 (392) ...+.+..|.| T Consensus 466 ~~~~~~~~~~~~ 477 (488) T protein:vir:95 466 TAGEGTAKTPSA 477 (488) T ss_pred CCcccCCccccc Confidence 11112222222 No 135 >protein:vir:78161 Length: 355 # NCBI annotation: hypothetical protein # Family: family:all:2372 # MgeID: mge:1847 # MgeName: Min1 # Cross-refs: genbank:acc:YP_001294798;genbank:gi:149882819;genbank:GeneID:5309189 Probab=99.16 E-value=2.3e-10 Score=73.43 Aligned_cols=276 Identities=11% Similarity=0.029 Sum_probs=155.9 Q ss_pred eEEEeecc-CC--ceEEEEEeccccce-eeecCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHH Q lcl|Aclame:pro 110 FAYRWRNA-NG--ADMKWEYLRPSQVN-TYYFEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYS 185 (392) Q Consensus 110 ~~~i~r~~-~G--~~~~l~~l~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~ 185 (392) +.++++.. .| .|..|.+.++..+. ...+.+++......... .+.....++...+|+.++....+..+|.|.+.. T Consensus 1 v~Eivw~~~~g~~~~~~l~~r~~~~~~~f~~~~~~~l~~~~~~~~--~g~~~~~lp~~kfi~~~~~~~~g~p~G~gLlr~ 78 (355) T protein:vir:78 1 MFEQVYRIENGRARLGKLAWRPPRTISRFDVAPDGGLVAIEQWGV--FGKATVRIPVDRLVVFVNEREGANWLGQSLLRQ 78 (355) T ss_pred CeEEEEEeeCCeEEEeeeeecCccceeeeeeccCCceeEEEecCC--CCCCcceeccCCEEEEEeCCCCCCccchhhHHH Confidence 56666544 34 36778888887554 34555555443332221 223345677877777777666777899999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC--CCchHHH---------HH---HHHHHHhccccCCceeeccCCce Q lcl|Aclame:pro 186 LRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG--GLLSDKD---------KA---SRSRSFMKRSRSGGPVVLDDLEE 251 (392) Q Consensus 186 ~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~--~~~~~~~---------~~---~~~~~~~~~~~~g~~~vl~~g~~ 251 (392) +.-.........++...|.+.-+.|--+.+.+.+ ....++. +. ........ .....++++.|++ T Consensus 79 ~~w~~~fK~~~~~~w~~f~Er~g~g~p~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~i~~--g~~a~~iip~g~~ 156 (355) T protein:vir:78 79 AYKNWLLKDRFLRIQALVGERNGLGVPIYQGAPLPEAIARDTARAEQWLNDQKEEGLQLAKEFRA--GEAAGGYIPHGAN 156 (355) T ss_pred HHHHHHHHHhhHHHHHHHHHHcCCCceEEEecCCCCcccchhhhHHHHHHHHHHHHHHHHHHhhC--CcceeEeecCCce Confidence 9999999999999999999987444334444322 2211110 11 11111111 1224578899999 Q ss_pred EeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccc-h-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-cc Q lcl|Aclame:pro 252 FTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQS-S-IQQISGMYASALNRYLRPAISELEYKLSDHI-SV 328 (392) Q Consensus 252 ~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~-~-~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~~-~~ 328 (392) ++-+.......++.+..++..++|+.++.-.---.+..+++.+ . .+.......+.++-.++.|++.||+.|...+ .+ T Consensus 157 ie~~ea~g~~~~~~~~i~~~d~~Isk~iLGqtlTs~~~~~gGS~Alg~vh~~v~~~~~~aD~~~i~~~ln~~li~~l~~l 236 (355) T protein:vir:78 157 FTLTGVQGKLPEMDGPIRYHDEQIARAVLAHFLTLGGDKSTGSYALGDTFASFFTGSLNAVMKHIADVTQQHVVEDLVDQ 236 (355) T ss_pred EEEeecCCCcccHHHHHHHHHHHHHHHHhhhhhccccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh Confidence 8888776666778888899999988876443222222111111 1 2233455567788888999999998775421 11 Q ss_pred cch-------hh---hhcchHHHHHHHHHHHhCCCcCHHH-----HHHHHHhCCCCc-cc--ccc---ccCCCC------ Q lcl|Aclame:pro 329 NMR-------PA---IDPLGDNYLSTISTATRWGALAENQ-----ATFVLQEAGYIP-KD--LPA---PENTNK------ 381 (392) Q Consensus 329 d~~-------~~---~~~~~~~~~~~~~~~~~~g~~T~nE-----~R~~l~~~g~~~-~e--~~~---~e~~~~------ 381 (392) +.. .. ...+...+++.+..++..|+.-.++ +|+.+ |++. .+ ... .+..++ T Consensus 237 N~~~~~~~P~~~~~~~~~~~~~~a~~~~~l~~~G~~~~~~~~~~~~~e~~---gip~p~~~~~~~~~~~~~~~~~~~~~~ 313 (355) T protein:vir:78 237 NWGPEEPAPRLVPAQLGKEQPVTAEAIRALVECGAFTADPELEKDLRARY---GLPAPAERDDGADAAAAKAAGRRRAKR 313 (355) T ss_pred cCCCCCCCCEEEecCcChhHHHHHHHHHHHHhCCCccccHHHHHHHHHHh---CCCCCCCCCcccCCccccccccccccc Confidence 110 01 1223445678889999999876643 46655 5542 11 010 001110 Q ss_pred CC------CCCCCCCCC Q lcl|Aclame:pro 382 KT------TGQSNEPVP 392 (392) Q Consensus 382 ~~------~gd~~~p~p 392 (392) .+ .+.+..|.+ T Consensus 314 ~~~~~~~~~~~a~~~~a 330 (355) T protein:vir:78 314 LPGQRQGAALPSRSPRA 330 (355) T ss_pred cCCccccccccccCCCC Confidence 00 111111111 No 136 >protein:vir:106716 Length: 698 # NCBI annotation: gp18 # Family: family:all:297 # MgeID: mge:1599 # MgeName: Bcep1 # Cross-refs: genbank:acc:NP_944326;genbank:gi:38638625;genbank:GeneID:2657345 Probab=99.03 E-value=2.2e-10 Score=73.49 Aligned_cols=377 Identities=12% Similarity=0.044 Sum_probs=182.9 Q ss_pred Cc-chhhHhhc-c--cccccccccccccc-cccchhhhhhhhc--CCCCcccchhhhhcchHHHHHHHHHHHhhhhCcee Q lcl|Aclame:pro 1 MI-LPILNFIN-Q--TNDPPEVGSVQSYF-PDGNDAQIMESLL--GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKIN 73 (392) Q Consensus 1 m~-Mg~~~~~~-~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~ 73 (392) =+ -++-..|. . ...+.++...+.-+ .++.......|+. +.-|..+. ....+.|-+++|+..|++.+.+= |. T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~l-a~laQ~~eyr~~~~~ia~e~~R~-w~ 141 (698) T protein:vir:10 64 SPSLRLARQFEVDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTL-VLLAQLPEYRAMHEVLADECIRT-WG 141 (698) T ss_pred CccccccccceeccccCCccccchhhhhhcccccccccchhhhccCcchHHHH-HHHhhccchhhHHHHHHHHhhcc-cc Confidence 11 11111111 0 00011111111000 0111111111211 11122221 12235677899999999887543 42 Q ss_pred e-ecccc-----------------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEe--e------------ Q lcl|Aclame:pro 74 A-EKKKN-----------------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRW--R------------ 115 (392) Q Consensus 74 ~-~~~~~-----------------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~--r------------ 115 (392) - ..... ..+..+-..+.-+..+.+.+.+.. ++|-+.+++. - T Consensus 142 ~~~~~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erl~V~~~l~eai~~aR-lfGGa~~~i~I~gdd~~l~~PL~~~ 220 (698) T protein:vir:10 142 EAIGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQ-AFGRAHPYFKIKGDDQIMDTPLVPR 220 (698) T ss_pred eeccccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccceEEEEEeecCccccccccccc Confidence 1 11000 011111112222333333344444 4555554442 1 Q ss_pred ---ccCCceEEEEEeccccceeeecCc--------cceEEEEEEecCcceeeeEEEeceeEEEecCCCcc------cccc Q lcl|Aclame:pro 116 ---NANGADMKWEYLRPSQVNTYYFEY--------ENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSID------GGKT 178 (392) Q Consensus 116 ---~~~G~~~~l~~l~~~~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~------~~~~ 178 (392) ...|....|.+++|.+|++..... +...+|.+ .+ ..+..+.++.+...... -... T Consensus 221 ~~~I~kGslKGL~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V--~G------~~IH~SRL~~~vg~pvpd~LKp~y~f~ 292 (698) T protein:vir:10 221 PYTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWM--IG------SEVHATRLHTIVSRPVGDMLKPTYSFA 292 (698) T ss_pred cccccCccceeeeeecccccccchhhhccchhhccCCCceEEE--ec------ceecceeEEEecCCCchhhhcchhccC Confidence 123567779999999999854321 11222222 11 13566666555543211 1245 Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEE-eCCCCCc-hHHHHHHHHHHH-hccccCCceeecc-CCceEee Q lcl|Aclame:pro 179 GISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLT-VKGGGLL-SDKDKASRSRSF-MKRSRSGGPVVLD-DLEEFTA 254 (392) Q Consensus 179 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~-~~~~~~~-~~~~~~~~~~~~-~~~~~~g~~~vl~-~g~~~~~ 254 (392) |+|..+.+...+............+...-. ..++.. ..+.+.. .+.....+.+.. ...+| .++.+++ +.-+|+. T Consensus 293 G~Sv~q~~~e~V~~~~rT~~~v~~Li~~~~-~~~l~~dla~aL~~g~~~~l~~R~eli~~~Rsn-~G~~llDk~~Eefeq 370 (698) T protein:vir:10 293 GISMTQLAMPYIDNWLRTRQSVSDIVKQFS-VSGILMDLAQALTPGANVDLSMRAELINRYRDN-RNILFLDKATEEFFQ 370 (698) T ss_pred CccHHHHHHHHHHHHHHHhhhHHHHHHHhh-HHHHHHHHHHhcCChhhHHHHHHHHHHHHhcCc-cceEEEecCCcceEE Confidence 999999999998888877777666654322 222110 1111111 111111122221 22233 3567778 5789999 Q ss_pred cccChhhHHHHHHHHHHHHHHHHHhcccHHHc-CCccccc-c--------hHHHHHHHHHHHHHHHHHHHHHHHHHHhh- Q lcl|Aclame:pro 255 LEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGDQQ-S--------SIQQISGMYASALNRYLRPAISELEYKLS- 323 (392) Q Consensus 255 l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~~~-~--------~~~~~~~~~~~~l~p~l~~i~~~l~~~l~- 323 (392) .+.+...+ -+......+.||.+-+||...| |.+..+- + .++.+++.-..-|.|.++.+.+-|.+..+ T Consensus 371 ~st~lSGL--ddVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G 448 (698) T protein:vir:10 371 FNTPLSGL--DALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFG 448 (698) T ss_pred EecCcCCH--HHHHHHHHHHHHhhhcCchhhhhccCCcccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC Confidence 98777554 4566777789999999999955 5433322 1 22334444456778888887777766543 Q ss_pred ---hhhcccchhhhhcchHHHHH-------HHHHHHhCCCcCHHHHHHHHHhC---CCC----ccccccc------cCC- Q lcl|Aclame:pro 324 ---DHISVNMRPAIDPLGDNYLS-------TISTATRWGALAENQATFVLQEA---GYI----PKDLPAP------ENT- 379 (392) Q Consensus 324 ---~~~~~d~~~~~~~~~~~~~~-------~~~~~~~~g~~T~nE~R~~l~~~---g~~----~~e~~~~------e~~- 379 (392) +.+.|.+..+...+..++++ ....++..|+++++|+|+.|... ||. .+|.|.+ ++. T Consensus 449 ~idp~i~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~d~~d~p~~~~~~~~~~~~ 528 (698) T protein:vir:10 449 AVDPSIKWQWNALRELDDLEVAEARYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGAPADDDIDGVL 528 (698) T ss_pred CCCCcceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhccCCCccccccCCcccCCCCCCCcchHHH Confidence 45555656666666666543 45567789999999999999653 342 1222211 111 Q ss_pred ----CCCCCCCCCC-------------CCC Q lcl|Aclame:pro 380 ----NKKTTGQSNE-------------PVP 392 (392) Q Consensus 380 ----~~~~~gd~~~-------------p~p 392 (392) ..-.||+..+ |++ T Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (698) T protein:vir:10 529 TYVQRMAEGGDTGAPTAPGGARAGATAPPA 558 (698) T ss_pred hhhcCCcCCCCcccccccccccCCCCCCcc Confidence 1122333333 111 No 137 >protein:vir:78589 Length: 695 # NCBI annotation: NUDIX hydrolase # Family: family:all:297 # MgeID: mge:1854 # MgeName: BcepNY3 # Cross-refs: genbank:acc:YP_001294854;genbank:gi:149882917;genbank:GeneID:5291060 Probab=99.01 E-value=8.2e-10 Score=70.41 Aligned_cols=377 Identities=11% Similarity=0.036 Sum_probs=182.6 Q ss_pred Cc-chhhHhhc-c--cccccccccccccc-cccchhhhhhhhc--CCCCcccchhhhhcchHHHHHHHHHHHhhhhCcee Q lcl|Aclame:pro 1 MI-LPILNFIN-Q--TNDPPEVGSVQSYF-PDGNDAQIMESLL--GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKIN 73 (392) Q Consensus 1 m~-Mg~~~~~~-~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~ 73 (392) -+ -++-..|. . ...+.++...+.-+ .++.......|+. +.-|..+. ....+.|-+++|+..|++.+.+= |. T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~l-a~laQ~~eyr~~~~~ia~e~~R~-w~ 141 (695) T protein:vir:78 64 SPSLRLARQFEVDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTL-VLLAQLPEYRAMHEVLADECIRT-WG 141 (695) T ss_pred CcccccceeceeccccCCccccchhhhhhcccccccccchhhhccCcchHHHH-HHHhhccchhhHHHHHHHHhhcc-cc Confidence 11 01111110 0 00011111111000 0111111111211 11122221 12235677899999999887543 42 Q ss_pred e-ecccc-----------------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEee-------------- Q lcl|Aclame:pro 74 A-EKKKN-----------------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR-------------- 115 (392) Q Consensus 74 ~-~~~~~-----------------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r-------------- 115 (392) - ..... ..+..+-....-+..|.+.+.+.. ++|-+.+++.- T Consensus 142 ~~~~~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erL~V~~~l~eaik~aR-lfGGa~~~i~i~gdd~~l~~PL~~~ 220 (695) T protein:vir:78 142 EAIGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQ-AFGRAHPYFKIKGDDQIMDTPLVPR 220 (695) T ss_pred eeccccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccceEEEEEeccCccccccccccc Confidence 1 11000 011111112222333333344444 56666544421 Q ss_pred ---ccCCceEEEEEeccccceeeecC--------ccceEEEEEEecCcceeeeEEEeceeEEEecCCCc------ccccc Q lcl|Aclame:pro 116 ---NANGADMKWEYLRPSQVNTYYFE--------YENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSI------DGGKT 178 (392) Q Consensus 116 ---~~~G~~~~l~~l~~~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~------~~~~~ 178 (392) ...|....|.+++|.++++.... ++...+|.. . + ..+..+.++.+..... .-... T Consensus 221 ~~~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V--~----G--~kIH~SRL~~f~g~plPd~LKp~y~~~ 292 (695) T protein:vir:78 221 PYTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWM--I----G--TEVHATRLHTIVSRPVGDMLKPTYSFA 292 (695) T ss_pred cccccCcceeeeEeecccccccchhhhccchhhccCCCceEEE--e----c--eEEeeeeEEEecCCCchhhhhcccccC Confidence 12356777999999999985432 112222222 1 1 1456666665554321 11246 Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeC--CCCCc-hHHHHHHHHHHHhccccCCceeecc-CCceEee Q lcl|Aclame:pro 179 GISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVK--GGGLL-SDKDKASRSRSFMKRSRSGGPVVLD-DLEEFTA 254 (392) Q Consensus 179 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~--~~~~~-~~~~~~~~~~~~~~~~~~g~~~vl~-~g~~~~~ 254 (392) |+|..+.+...+............+...-. ..++ +++ +.+.. .+.....+.+.+.......++.+++ +.-+|+. T Consensus 293 GiSv~q~~~e~V~~~~rT~~~v~~Li~~~~-v~~l-k~dla~~L~~g~~~~l~~R~eli~~~Rsn~G~~llDk~~Eefeq 370 (695) T protein:vir:78 293 GISMTQLAMPYIDNWLRTRQSVSDIVKQFS-VSGI-LMDLAQALMPGANVDLSMRAELINRYRDNRNILFLDKATEEFFQ 370 (695) T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHhhh-hHHH-HHHHHHhhcChhHHHHHHHHHHHHHhcCccceEEEecCCcceEE Confidence 999999999988888777777766654322 2222 111 11111 1111112222222222333567778 4789999 Q ss_pred cccChhhHHHHHHHHHHHHHHHHHhcccHHHc-CCccccc-c--------hHHHHHHHHHHHHHHHHHHHHHHHHHHhh- Q lcl|Aclame:pro 255 LEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGDQQ-S--------SIQQISGMYASALNRYLRPAISELEYKLS- 323 (392) Q Consensus 255 l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~~~-~--------~~~~~~~~~~~~l~p~l~~i~~~l~~~l~- 323 (392) .+.+...+ -+......+.||.+-+||...| |.+..+- + .++.+++.-..-|.|.++.+.+-+.+..+ T Consensus 371 ~stslSGL--ddVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G 448 (695) T protein:vir:78 371 FNTPLSGL--DALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFG 448 (695) T ss_pred EecccCCH--HHHHHHHHHHHHhhhcCchhhhhccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC Confidence 98777544 4566677789999999999955 5433322 1 22334444456778888887777766543 Q ss_pred ---hhhcccchhhhhcchHHHH-------HHHHHHHhCCCcCHHHHHHHHHhC---CCC----ccccccccCCC------ Q lcl|Aclame:pro 324 ---DHISVNMRPAIDPLGDNYL-------STISTATRWGALAENQATFVLQEA---GYI----PKDLPAPENTN------ 380 (392) Q Consensus 324 ---~~~~~d~~~~~~~~~~~~~-------~~~~~~~~~g~~T~nE~R~~l~~~---g~~----~~e~~~~e~~~------ 380 (392) +.+.|.+..+...+.++++ +....++..|+++++|+|+.|... ||. .+|.|.+..-+ T Consensus 449 ~idpdi~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~~d~p~~~~~~~~~~~~ 528 (695) T protein:vir:78 449 AVDPSIKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGVPADDDIDGVL 528 (695) T ss_pred CCCCcceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCcccccccccccCCCcCccchhhhhH Confidence 4455555556666666554 345667789999999999998653 342 12222211100 Q ss_pred ----CC-CC---CCCCCCCC Q lcl|Aclame:pro 381 ----KK-TT---GQSNEPVP 392 (392) Q Consensus 381 ----~~-~~---gd~~~p~p 392 (392) +. .+ |+..++.| T Consensus 529 ~~~~~~~~~~~~~~~~~~~~ 548 (695) T protein:vir:78 529 TYVQRLAEGGDTGAPGGARA 548 (695) T ss_pred hhhcCcccccccCCCCCCCC Confidence 01 11 12222222 No 138 >protein:vir:101541 Length: 694 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:1477 # MgeName: Bcep43 # Cross-refs: genbank:acc:NP_958122;genbank:gi:41057668;genbank:GeneID:2716798 Probab=99.01 E-value=8.1e-10 Score=70.43 Aligned_cols=377 Identities=11% Similarity=0.032 Sum_probs=182.1 Q ss_pred CcchhhH-hhc---ccccccccccccccc-cccchhhhhhhhc--CCCCcccchhhhhcchHHHHHHHHHHHhhhhCcee Q lcl|Aclame:pro 1 MILPILN-FIN---QTNDPPEVGSVQSYF-PDGNDAQIMESLL--GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKIN 73 (392) Q Consensus 1 m~Mg~~~-~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~ 73 (392) -+-+-+. .|. ..-.+......+.-+ .++.......|+. +.-|..+. ....+.|-+++|+..|++.+.+= |. T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~l-a~laQ~~eyr~~~~~ia~e~~R~-w~ 140 (694) T protein:vir:10 63 SPSLRLARQFEVDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTL-VLLAQLPEYRAMHEVLADECIRT-WG 140 (694) T ss_pred CcchhhhhhccccccCCCccccchhhhhhccCcccccchhhhhccCcchHHHH-HHHhhccchhhHHHHHHHHhhcc-cc Confidence 1100010 000 000011111111000 0111111112221 11122221 12235678899999999887543 42 Q ss_pred e-ecccc-----------------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEe--e------------ Q lcl|Aclame:pro 74 A-EKKKN-----------------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRW--R------------ 115 (392) Q Consensus 74 ~-~~~~~-----------------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~--r------------ 115 (392) - ..... ..+..+-....-+..|.+.+.+.. ++|-+.+++. - T Consensus 141 ~~~~~~~e~~~~~g~~~~~~~~~~~d~dqi~~L~~e~erl~V~~~l~eaik~aR-lfGGa~~~i~I~gdd~~l~~PL~~~ 219 (694) T protein:vir:10 141 EAIGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHDQ-AFGRAHPYFKIKGDDQIMDTPLVPR 219 (694) T ss_pred eeccccchhhhhhcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccceEEEEEeecCccccccccccc Confidence 1 11000 011111112222333333344444 5666654442 1 Q ss_pred ---ccCCceEEEEEeccccceeeecC--------ccceEEEEEEecCcceeeeEEEeceeEEEecCCCc------ccccc Q lcl|Aclame:pro 116 ---NANGADMKWEYLRPSQVNTYYFE--------YENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSI------DGGKT 178 (392) Q Consensus 116 ---~~~G~~~~l~~l~~~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~------~~~~~ 178 (392) ...|....|.+++|.++++.... ++...+|.. . + ..+..+.++.+..... .-... T Consensus 220 ~~~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V--~----G--~~IH~SRL~~f~g~plPd~LKp~y~~~ 291 (694) T protein:vir:10 220 PYTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWM--I----G--TEVHATRLHTIVSRPVGDMLKPTYSFA 291 (694) T ss_pred cccccCcceeeeEeecccccccchhhhccchhhccCCCceEEE--e----c--eEEeeeeEEEecCCCchhhhhcccccC Confidence 12356777999999999985432 112222222 1 1 1456666665554321 11246 Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeC--CCCCc-hHHHHHHHHHHHhccccCCceeecc-CCceEee Q lcl|Aclame:pro 179 GISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVK--GGGLL-SDKDKASRSRSFMKRSRSGGPVVLD-DLEEFTA 254 (392) Q Consensus 179 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~--~~~~~-~~~~~~~~~~~~~~~~~~g~~~vl~-~g~~~~~ 254 (392) |+|..+.+...+............+...-. ..++ +++ +.+.. .+.....+.+.+.......++.+++ +.-+|+. T Consensus 292 G~Sv~q~~~e~V~~~~rT~~~v~~Li~~~~-v~~l-k~dla~~L~~g~~~~l~~R~eli~~~Rsn~G~~llDk~~Eefeq 369 (694) T protein:vir:10 292 GISMTQLAMPYIDNWLRTRQSVSDIVKQFS-VSGI-LMDLAQALMPGANVDLSMRAELINRYRDNRNILFLDKATEEFFQ 369 (694) T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHhhh-hHHH-HHHHHHhhcChhHHHHHHHHHHHHHhcCccceEEEecCCcceEE Confidence 999999999988888777777766654322 2222 111 11111 1111111222222222333567778 4789999 Q ss_pred cccChhhHHHHHHHHHHHHHHHHHhcccHHHc-CCccccc-c--------hHHHHHHHHHHHHHHHHHHHHHHHHHHhh- Q lcl|Aclame:pro 255 LEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGDQQ-S--------SIQQISGMYASALNRYLRPAISELEYKLS- 323 (392) Q Consensus 255 l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~~~-~--------~~~~~~~~~~~~l~p~l~~i~~~l~~~l~- 323 (392) .+.+...+ -+......+.||.+-+||...| |.+..+- + .++.+++.-..-|.|.++.+.+-+.+..+ T Consensus 370 ~stslSGL--ddVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G 447 (694) T protein:vir:10 370 FNTPLSGL--DALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFG 447 (694) T ss_pred EecccCCH--HHHHHHHHHHHHhhhcCchhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC Confidence 98777544 4566677789999999999955 5433322 1 22334444456778888887777766543 Q ss_pred ---hhhcccchhhhhcchHHHH-------HHHHHHHhCCCcCHHHHHHHHHhC---CCC----ccccccccCCC------ Q lcl|Aclame:pro 324 ---DHISVNMRPAIDPLGDNYL-------STISTATRWGALAENQATFVLQEA---GYI----PKDLPAPENTN------ 380 (392) Q Consensus 324 ---~~~~~d~~~~~~~~~~~~~-------~~~~~~~~~g~~T~nE~R~~l~~~---g~~----~~e~~~~e~~~------ 380 (392) +.+.|.+..+...+.++++ +....++..|+++++|+|+.|... ||. .+|.|.+..-+ T Consensus 448 ~idp~i~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~~d~p~~~~~~~~~~~~ 527 (694) T protein:vir:10 448 AVDPSIKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGVPADDDIDGVL 527 (694) T ss_pred CCCCcceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCcccccccccccCCCcCccchhhhhH Confidence 4455555556666666554 345667789999999999998653 342 12222211100 Q ss_pred ----CC-CCCCCC---CCCC Q lcl|Aclame:pro 381 ----KK-TTGQSN---EPVP 392 (392) Q Consensus 381 ----~~-~~gd~~---~p~p 392 (392) +. .+++.+ ++.+ T Consensus 528 ~~~~~~~~~~~~~~~~~~~~ 547 (694) T protein:vir:10 528 TYVQRLAEGGDTGAPGGARA 547 (694) T ss_pred hhhcCcccccccCCCCcccc Confidence 01 111111 1111 No 139 >protein:vir:3648 Length: 695 # NCBI annotation: gp17 # Family: family:all:297 # MgeID: mge:75 # MgeName: Bcep781 # Cross-refs: genbank:acc:NP_705643;genbank:gi:23752328;genbank:GeneID:955749 Probab=99.00 E-value=8.9e-10 Score=70.20 Aligned_cols=377 Identities=11% Similarity=0.047 Sum_probs=180.6 Q ss_pred Cc-chhhHhhc-c--cccccccccccccc-cccchhhhhhhhc--CCCCcccchhhhhcchHHHHHHHHHHHhhhhCcee Q lcl|Aclame:pro 1 MI-LPILNFIN-Q--TNDPPEVGSVQSYF-PDGNDAQIMESLL--GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKIN 73 (392) Q Consensus 1 m~-Mg~~~~~~-~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~ 73 (392) -+ -++-..|. . ...+......+.-+ .++.......|+. +.-|..+. ....+.|-+++|+..|++.+.+= |. T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~F~Gy~~l-a~laQ~~eyr~~~~~ia~e~~R~-w~ 141 (695) T protein:vir:36 64 SPSLRLARQFEVDVSNYTPRERRAASYALDFNGTSMDALSFVTSSGFPGFPTL-VLLAQLPEYRAMHEVLADECIRT-WG 141 (695) T ss_pred CcccccceeceecccccCccccchhhhhhcccccccccchhhhccCcchHHHH-HHHhhccchhhHHHHHHHHhhcc-cc Confidence 11 01111110 0 00011111110000 0111111111211 11122221 12235677899999999887543 42 Q ss_pred e-ecccc-----------------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEee-------------- Q lcl|Aclame:pro 74 A-EKKKN-----------------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR-------------- 115 (392) Q Consensus 74 ~-~~~~~-----------------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r-------------- 115 (392) - ..... ..+...-....-+..|.+.+.+. -++|-+.+++.- T Consensus 142 ~~~~~~~e~~~~~g~~~~~~~~~~~d~dqik~L~~e~erL~V~~~l~eaik~a-RlfGGa~~~i~i~gdd~~l~~PL~~~ 220 (695) T protein:vir:36 142 EAIGGTKEKADTSGLAAGGNAASTSDGDQLKQINDEIERLRIRDAVRTTVIHD-QAFGRAHPYFKIKGDDQIMDTPLVPR 220 (695) T ss_pred eecccchhhhhhccccccccccccCchHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccceEEEEEeccCccccccccccc Confidence 1 11000 00111111112222333333333 456666544421 Q ss_pred ---ccCCceEEEEEeccccceeeecC--------ccceEEEEEEecCcceeeeEEEeceeEEEecCCCc------ccccc Q lcl|Aclame:pro 116 ---NANGADMKWEYLRPSQVNTYYFE--------YENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSI------DGGKT 178 (392) Q Consensus 116 ---~~~G~~~~l~~l~~~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~------~~~~~ 178 (392) ...|....|.+++|.++++.... ++...+|.. . + ..+..+.++.+..... .-... T Consensus 221 ~~~I~kGslKGl~ViDp~~vtP~~~n~~dP~spdfgkP~~y~V--~----G--~kIH~SRL~~f~g~plPd~LKp~y~~~ 292 (695) T protein:vir:36 221 PYTVPKGSFQGLRVVEPYWVTPNNYNSINPVADDFYKPSTWWM--I----G--TEVHATRLHTIVSRPVGDMLKPTYSFA 292 (695) T ss_pred cccccCcceeeeEeecccccccchhhhccchhhccCCCceEEE--e----c--eEEeeeeEEEecCCCchhhhhcccccC Confidence 12356777999999999985432 112222222 1 1 1456666665554321 11246 Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeC--CCCCc-hHHHHHHHHHHHhccccCCceeecc-CCceEee Q lcl|Aclame:pro 179 GISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVK--GGGLL-SDKDKASRSRSFMKRSRSGGPVVLD-DLEEFTA 254 (392) Q Consensus 179 G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~--~~~~~-~~~~~~~~~~~~~~~~~~g~~~vl~-~g~~~~~ 254 (392) |+|..+.+...+............+...-. ..++ +++ +.+.. .+.....+.+.+.......++.+++ +.-+|+. T Consensus 293 GiSv~q~~~e~V~~~~rT~~~v~~Li~~~~-v~~l-k~dla~aL~~g~~~~l~~R~eli~~~Rsn~G~~llDk~~Eefeq 370 (695) T protein:vir:36 293 GISMTQLAMPYIDNWLRTRQSVSDIVKQFS-VSGI-LMDLAQALMPGANVDLSMRAELINRYRDNRNILFLDKATEEFFQ 370 (695) T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHhhh-HHHH-HHHHHHhhcChhHHHHHHHHHHHHHhcCccceEEEecCCcceEE Confidence 999999999988888777776666654322 2222 111 11111 1111111222222222333567778 4789999 Q ss_pred cccChhhHHHHHHHHHHHHHHHHHhcccHHHc-CCccccc-c--------hHHHHHHHHHHHHHHHHHHHHHHHHHHhh- Q lcl|Aclame:pro 255 LEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGDQQ-S--------SIQQISGMYASALNRYLRPAISELEYKLS- 323 (392) Q Consensus 255 l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~~~-~--------~~~~~~~~~~~~l~p~l~~i~~~l~~~l~- 323 (392) .+.+...+ -+......+.||.+-+||...| |.+..+- + .++.+++.-..-|.|.++.+.+-+.+..+ T Consensus 371 ~stslSGL--ddVi~qf~q~VAgaa~IPltkLfGqSPkGlNATGE~D~rnYYD~I~s~Qe~~L~p~L~rl~~ii~rS~~G 448 (695) T protein:vir:36 371 FNTPLSGL--DALQAQAQEQMSAVSHIPLIKLLGITPTGLNASSEGEIRVWYDYVRAYQRNALQQLMNDVIVMIQLSLFG 448 (695) T ss_pred EecccCCH--HHHHHHHHHHHHhhhcCchhhhhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC Confidence 98777544 4566677789999999999955 5433322 1 22334444456778888887777766543 Q ss_pred ---hhhcccchhhhhcchHHHH-------HHHHHHHhCCCcCHHHHHHHHHhC---CCC----ccccccccCCC------ Q lcl|Aclame:pro 324 ---DHISVNMRPAIDPLGDNYL-------STISTATRWGALAENQATFVLQEA---GYI----PKDLPAPENTN------ 380 (392) Q Consensus 324 ---~~~~~d~~~~~~~~~~~~~-------~~~~~~~~~g~~T~nE~R~~l~~~---g~~----~~e~~~~e~~~------ 380 (392) +.+.|.+..+...+.++++ +....++..|+++++|+|+.|... ||. .+|.|.+..-+ T Consensus 449 ~idpdi~~~fnPL~qmtd~EkAeI~~k~A~~d~~~~~~gvI~~~evr~rL~~d~~s~Y~~~~D~~d~p~~~~~~~~~~~~ 528 (695) T protein:vir:36 449 AVDPSIKWQWNALRELDDLEVAESRYKQAQSDVLYVQEQVIRPDQVAARLNTEPDGPYAGKLDANDDPGVPADDDIDGVL 528 (695) T ss_pred CCCCcceEEeCCCCCcCHHHHHHHHhhhhHHHHHHHHhcCCCHHHHHHHHhcCCCcccccccccccCCCcCccchhhhhH Confidence 4455555556666666554 345667789999999999998653 342 12222211100 Q ss_pred ----CC-CCCCCCC---C-----CC Q lcl|Aclame:pro 381 ----KK-TTGQSNE---P-----VP 392 (392) Q Consensus 381 ----~~-~~gd~~~---p-----~p 392 (392) +. .+++.+. + .| T Consensus 529 ~~~~~~~~~~~~~~~~~~~~g~~~~ 553 (695) T protein:vir:36 529 TYVQRLAEGGDTGAPGGARAGATAP 553 (695) T ss_pred hhhcCcccccccCCCCcccccccCC Confidence 01 1111111 1 11 No 140 >protein:vir:98444 Length: 434 # NCBI annotation: hypothetical protein # Family: family:all:5096 # MgeID: mge:1589 # MgeName: VWB # Cross-refs: genbank:acc:NP_958276;genbank:gi:41057250;genbank:GeneID:2732828 Probab=98.88 E-value=4.6e-09 Score=66.27 Aligned_cols=348 Identities=8% Similarity=-0.048 Sum_probs=158.5 Q ss_pred cccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHH Q lcl|Aclame:pro 24 YFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQL 103 (392) Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l 103 (392) ..+....... ..+.. .+.. ....-+|+.+++.+---.|.+-+.+.+..+.+-...-........+..+. T Consensus 1 ~l~~~~~~~~-~~~~~---------~~v~-n~~~~ivd~~~~~l~~~gf~~~d~~~~~~~~~i~~~N~~d~~~~~~~~~a 69 (434) T protein:vir:98 1 MLPKNAEQAF-LDFQR---------KART-NFCGLIANASVHRLLALGVTGPDGEPDTRASRWWQANRLDSRQKLVWRMA 69 (434) T ss_pred CCCCCccHHH-HHhhh---------hhhc-cchHHHHHHHHhhhccCceecCCCchHHHHHHHHHhcChhHHHHHHHHHH Confidence 1111111111 11100 0001 11234566555544322333322222211111111112234456688888 Q ss_pred HHhCCeeEEEeeccCCc-----e-EEEEEeccccceeeecCccceEEEE---EEec-Ccceee----------------- Q lcl|Aclame:pro 104 LLGGEAFAYRWRNANGA-----D-MKWEYLRPSQVNTYYFEYENGMYYN---ITFD-DPKIEP----------------- 156 (392) Q Consensus 104 ~l~Gn~~~~i~r~~~G~-----~-~~l~~l~~~~v~~~~~~~~~~~~~~---~~~~-~~~~~~----------------- 156 (392) +.+|.+|+++.++.++. + ..+.+++|..+.+.++...+.+..- +... ++.... T Consensus 70 ~i~G~ay~~v~~~~~~~~~~~~~~~~I~~~~p~~~~~i~D~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (434) T protein:vir:98 70 MAQSAGYMLVGAHPTRTEDNGRPSPLITMEHPSECIVEYDPETGEPLVGLKVWHNDIDGFGYARVFFDDTSFPYRTRERT 149 (434) T ss_pred hhcCceEEEEecCCCcccccCCceeEEEEeccceeEEEEeCCCCceEEEEEEEEeccCCceEEEEEEeCcEEEEEEeecc Confidence 99999999988765442 2 2366788988887776543221110 1000 000000 Q ss_pred ---------------------eEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEE Q lcl|Aclame:pro 157 ---------------------ILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLT 215 (392) Q Consensus 157 ---------------------~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~ 215 (392) ...+..-.|+|+.++...+. .|.|.+......++....+.-...+..+-.+.|..++. T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~N~~~~~~-~g~sd~e~vi~liDa~~~~~s~~~~~~~~~a~p~~~i~ 228 (434) T protein:vir:98 150 GARLPWGPDSWVYTGTADSGDVHDLGGMQLVEFARMPDLGE-DPEPEFAGVLDIQDRVNLGILNRMAASRFSGFRQKWIK 228 (434) T ss_pred ccccccccccceecccccccccCCCCccceEEeccCCCcCc-CCcchhhhHHHHHHHHHHHHHHHHHHHHHhcchhhhhc Confidence 00122344666766543333 48898888888877777776555555454455554443 Q ss_pred eCC-C-CCchHHHHHHHHHHHhccccCCceeecc-CCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc Q lcl|Aclame:pro 216 VKG-G-GLLSDKDKASRSRSFMKRSRSGGPVVLD-DLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ 292 (392) Q Consensus 216 ~~~-~-~~~~~~~~~~~~~~~~~~~~~g~~~vl~-~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~ 292 (392) ... . ..+++.......+.. ....++++.++ ++.++.++..+.- ..+++..+..+..|+..=++|++.+|+..+ T Consensus 229 G~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~q~~~~~~-~~~~~~l~~~i~~~~~~~~~p~~~~~~~~~- 304 (434) T protein:vir:98 229 GHKFAKRTDPATGMTVVDQPF--VPSPSAVWASEGENTQFGQLDATDL-SGFLKEHASDVRDMLTISQTPTYLYATDLV- 304 (434) T ss_pred CCCcccccccccccchhhhhh--hccccccccCCCCCceEEEecCcch-HHHHHHHHHHHHHHhcccCCCHHHhccccC- Confidence 211 1 111111111111111 12233556665 4677777665332 237888888999999999999999986432 Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------------hhcccchhhhhcchHHHHHHHHHHHhCCCcCH Q lcl|Aclame:pro 293 QSSIQQISGMYASALNRYLRPAISELEYKLSD----------------HISVNMRPAIDPLGDNYLSTISTATRWGALAE 356 (392) Q Consensus 293 ~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~----------------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~ 356 (392) +.+.++.+ +-...+.-.+...+..|...|-. .++.....-...+..+.+..+.++...|+ +. T Consensus 305 n~Sg~Al~-~~~~~l~~k~~~k~~~f~~~l~~~~rl~~~~~g~~~~~~~~~v~w~~~~~~s~~~~ada~~kl~~~g~-~~ 382 (434) T protein:vir:98 305 NISADTIG-ALDILHVAKVREHIASFSEGLESVLALAAAQAGVPEDYTEAEVRWANPAHVTMAVKADAATKLKSIGY-PL 382 (434) T ss_pred ChHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhheeeeEEecCCCCCCHHHHHHHHHHHHhcCC-cH Confidence 23333333 22222333333333333322211 11111222223455667777888887775 55 Q ss_pred HHHHHHHHhCCCCccccccccCC-------CCCCCCCCCCCCC Q lcl|Aclame:pro 357 NQATFVLQEAGYIPKDLPAPENT-------NKKTTGQSNEPVP 392 (392) Q Consensus 357 nE~R~~l~~~g~~~~e~~~~e~~-------~~~~~gd~~~p~p 392 (392) .-++++| |+.+.++.+++.. .......+.+|.+ T Consensus 383 e~~~~~l---g~~~~e~~r~~~e~~~~~~~~~~~~~~~~~~~~ 422 (434) T protein:vir:98 383 DVIAEEL---DESPARVRRIVAGAASQALLAASLLPAPGAPSA 422 (434) T ss_pred HHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhhhccCCCCCC Confidence 4445444 6666554322100 0000001111111 No 141 >protein:vir:8654 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:156 # MgeName: Rosebush # Cross-refs: genbank:acc:NP_817773;genbank:gi:29566205;genbank:GeneID:1259465 Probab=98.76 E-value=7.6e-09 Score=65.10 Aligned_cols=382 Identities=12% Similarity=0.049 Sum_probs=200.1 Q ss_pred CcchhhHhhccccccccccccc------ccccccchhhhhhhh-cCCC-Ccccchhhhh-cchHHHHHHHHHHHhhhhCc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQ------SYFPDGNDAQIMESL-LGDN-NEWVSARAAL-RNSDLFSIILQLSSDLAIVK 71 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~-~~~v~~~~a~-~~~~v~~~i~~ia~~ia~~p 71 (392) |.-.=++..++.+-.+..+... .+.++. ...++..+ .+.. ......-.++ ..|.+...+..|+++++++. T Consensus 1 ma~~~lr~~rrpk~~p~~~r~~al~aas~~i~~p-~~~~~ks~~~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~Sr~r 79 (629) T protein:vir:86 1 MAPTSLRIVRRPKSEPVSTRQRALVAASQPVENP-GKAFRKAMGSSTRTDWQEDAWKAYDAVGELRYYVGWRSSSASRVR 79 (629) T ss_pred CCccceeeeecCCCCChhhhhhhhhhhhhccccc-cchhhhhcCCCchhhhhHHHHHHHHhhhhHHHHhhhhhhhhceee Confidence 6555566666554433221111 111110 01111111 1100 0111111112 25667788889999999999 Q ss_pred eeeeccccc-----cccccCCc---------------cCCHHHHHHHHHHHHHHhCCeeEEEeeccC------CceEEE- Q lcl|Aclame:pro 72 INAEKKKNQ-----GIIDNPST---------------NANKHGFWQSMFAQLLLGGEAFAYRWRNAN------GADMKW- 124 (392) Q Consensus 72 ~~~~~~~~~-----~~~~~PN~---------------~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~------G~~~~l- 124 (392) +..-+-+.+ .-.++|++ .+...++++.+..+|..-|++|+.+..... +.++.. T Consensus 80 L~as~idpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~~~eW 159 (629) T protein:vir:86 80 LIASAIDPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNPVPEW 159 (629) T ss_pred eEeeeecCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcchhhh Confidence 877553322 11233433 356779999999999999999998873333 333333 Q ss_pred EEeccccceeeecCccceEEEEEEecCcceeeeEEEeceeEE-EecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 125 EYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQSDLI-HMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISS 203 (392) Q Consensus 125 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi-h~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~ 203 (392) +.+-++.+.- +.++.. .... .+.+....+..+++ .+=.+++.....--||+.++...+.....+.+...+. T Consensus 160 ~~vt~~ei~~---~~~~~~---i~lP--~g~~~e~~~~~d~l~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~lt~~i~aa 231 (629) T protein:vir:86 160 LALTPEEVRA---SEKKTI---IELP--TGDKHEFRDGLDGMFRVWNPRARRAREPDSPVRANLDSLKEIVRTTKTIANA 231 (629) T ss_pred eeechHHhhh---ccCcee---eEcC--CCCcceeeCCCceEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHH Confidence 3455555542 222211 1111 12333344444444 2223444445567899999999999999998888888 Q ss_pred HHcCCCcceEEEeCCCCCch------------------------HHHHHHHHH----HHhccccCC--ceeecc------ Q lcl|Aclame:pro 204 LNSSLNVPGVLTVKGGGLLS------------------------DKDKASRSR----SFMKRSRSG--GPVVLD------ 247 (392) Q Consensus 204 ~~ng~~~~~il~~~~~~~~~------------------------~~~~~~~~~----~~~~~~~~g--~~~vl~------ 247 (392) .+....-.|++.++...+-+ ++....+.+ .+...+... -++++. T Consensus 232 akSRL~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia~~P~E~i 311 (629) T protein:vir:86 232 SKSRLIGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFAAAPGELI 311 (629) T ss_pred HHHHHhhCceeeeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHHh Confidence 88777778887765432110 112222221 111222222 233332 Q ss_pred CCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHc-CCcccccchHH-H-HHHHHHHHHHHHHHHHHHHHHHHhhh Q lcl|Aclame:pro 248 DLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGDQQSSIQ-Q-ISGMYASALNRYLRPAISELEYKLSD 324 (392) Q Consensus 248 ~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~~~~~~~-~-~~~~~~~~l~p~l~~i~~~l~~~l~~ 324 (392) ++.+.-.+.....+ --+.+|+..+..+|...-|||+.| |..++.+-+.. + ...-++..|+|.+..|+++|+..+++ T Consensus 312 ~~i~hlkf~~ei~e-~aiktR~daI~RlA~glDippE~LLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~AlT~~~Lr 390 (629) T protein:vir:86 312 KNVTHLKFDNQVTE-VAIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVRLHILPPVEMLCEAITNQVLR 390 (629) T ss_pred cCeeEEeecCchhH-HHHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchHHHHHHHHHHhhHHH Confidence 33344444433333 347899999999999999999965 54345442221 1 12335678999999999999988764 Q ss_pred ----hhcccchhh---hhcchH----HHHHHHHHHHhCCCcCHHHHHHHHHh---CCC--Cccc------------cccc Q lcl|Aclame:pro 325 ----HISVNMRPA---IDPLGD----NYLSTISTATRWGALAENQATFVLQE---AGY--IPKD------------LPAP 376 (392) Q Consensus 325 ----~~~~d~~~~---~~~~~~----~~~~~~~~~~~~g~~T~nE~R~~l~~---~g~--~~~e------------~~~~ 376 (392) ..++|-... ++.+.. .+...+..++..|.+|-...|+.|+. .|+ ...| .|++ T Consensus 391 p~Le~eGiDp~kYvvW~DaS~Lt~dPd~~deA~~a~drGAIt~eAlrk~lGf~eD~~yd~tt~E~~~~~a~d~V~~~P~L 470 (629) T protein:vir:86 391 TVLMREGIDPNAYVVWHDASQLTVDPDKTDEARDAFDRGAITAEAMVKMLGLADDTVYDFTTPEGWAQWARDRVGQDPNL 470 (629) T ss_pred HHHHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCCcCHHHHHHHhcCccccccCCCchHHHHHHHHHhhhhCcch Confidence 334443321 121111 12345667788999999999988742 122 1111 1111 Q ss_pred ------------cC--------CCCC--CCCC--------CCCCCC Q lcl|Aclame:pro 377 ------------EN--------TNKK--TTGQ--------SNEPVP 392 (392) Q Consensus 377 ------------e~--------~~~~--~~gd--------~~~p~p 392 (392) +. ++|. .+|+ +++|.+ T Consensus 471 i~~~a~l~~~~a~~~~P~~~~~~pp~~e~~~~dE~sga~~~~ep~t 516 (629) T protein:vir:86 471 LPTLAVLIPELADVEFPTPTVALPPAEEQDGDEEASGASRREEPDT 516 (629) T ss_pred hhhhhhhhhhhcccccCccCCCCCccccCCCcccccCCCcCCCCCC Confidence 00 0111 0011 001111 No 142 >protein:vir:99088 Length: 629 # NCBI annotation: gp12 # Family: family:all:2798 # MgeID: mge:1608 # MgeName: Qyrzula # Cross-refs: genbank:acc:YP_655692;genbank:gi:109521770;genbank:GeneID:4157810 Probab=98.74 E-value=9e-09 Score=64.68 Aligned_cols=382 Identities=12% Similarity=0.048 Sum_probs=199.8 Q ss_pred CcchhhHhhccccccccccccc------ccccccchhhhhhhh-cCCC-Ccccchhhhh-cchHHHHHHHHHHHhhhhCc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQ------SYFPDGNDAQIMESL-LGDN-NEWVSARAAL-RNSDLFSIILQLSSDLAIVK 71 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~-~~~v~~~~a~-~~~~v~~~i~~ia~~ia~~p 71 (392) |.-.=++..++.+-.+..+... .+.+.. ...++..+ .+.. ......-.++ ..|.+...+..|+++++++. T Consensus 1 ma~~~lr~~rrpk~~p~~~r~~al~aas~~i~~p-~~~~~ks~~~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~Sr~r 79 (629) T protein:vir:99 1 MAPTSLRIVRRPKSEPVSTRQRALVAASQPVENP-GKAFRKAMGSSTRTDWQDDAWKAYDAVGELRYYVGWRSSSASRVR 79 (629) T ss_pred CCccceeeeecCCCCChhhhhhhhhhhhhccccc-chhhhhhcCCCchhhhhHHHHHHHHhhhhHHHHhhhhhhhhceee Confidence 6555566666554433221111 111110 01111111 1110 0111111112 25667788899999999999 Q ss_pred eeeeccccc-----cccccCCc---------------cCCHHHHHHHHHHHHHHhCCeeEEEeeccC------CceEEE- Q lcl|Aclame:pro 72 INAEKKKNQ-----GIIDNPST---------------NANKHGFWQSMFAQLLLGGEAFAYRWRNAN------GADMKW- 124 (392) Q Consensus 72 ~~~~~~~~~-----~~~~~PN~---------------~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~------G~~~~l- 124 (392) +..-+-+.+ .-.++|++ .+...++++.+..+|..-|++|+.+..... |.++.. T Consensus 80 L~as~idpDtg~ptg~i~e~~~~~~~v~~~v~~i~gG~lgqa~lLkr~~~~ltV~GE~wiv~~~~~~~~~d~~~~~~~eW 159 (629) T protein:vir:99 80 LIASAIDPDTGLPTGSIDEDDRVGARVQQIVNQIAGGALGQAQLIKRVVEQLTVAGETWVAILFTDKSRLDSNGNPVPEW 159 (629) T ss_pred eEeeeecCCCCCCccccCCCchhHHHHHHHHHhhcCChhhHHHHHHHHHhheecccceEEEEeecCCCccCCCCcchhhh Confidence 877553322 11233433 356779999999999999999998873333 333333 Q ss_pred EEeccccceeeecCccceEEEEEEecCcceeeeEEEeceeEE-EecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 125 EYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQSDLI-HMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISS 203 (392) Q Consensus 125 ~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi-h~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~ 203 (392) +.+-++.+.- +.++.. .... .+.+....+..+++ .+=.+.+.....--||+.++...+.....+.+...+. T Consensus 160 ~~vt~~ei~~---~~~~~~---i~lP--~g~~~e~~~~~d~l~RiW~P~Prr~~e~DSpvra~l~~l~Ei~~lt~~i~aa 231 (629) T protein:vir:99 160 LALTPEEVRA---SEKKTI---IELP--TGDKHEFRDGLDGMFRVWNPRARRAREPDSPVRANLDSLKEIVRTTKTIANA 231 (629) T ss_pred eeechHHhhh---ccCcee---EEcC--CCCccceeCCCceEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHHHHH Confidence 3455555442 222211 1111 12333334444444 2223444445567899999999999999998888888 Q ss_pred HHcCCCcceEEEeCCCCCch------------------------HHHHHHHHH----HHhccccCC--ceeecc------ Q lcl|Aclame:pro 204 LNSSLNVPGVLTVKGGGLLS------------------------DKDKASRSR----SFMKRSRSG--GPVVLD------ 247 (392) Q Consensus 204 ~~ng~~~~~il~~~~~~~~~------------------------~~~~~~~~~----~~~~~~~~g--~~~vl~------ 247 (392) .+....-.|++.++...+-+ ++....+.+ .+...+... -++++. T Consensus 232 akSRL~gnGvlflP~e~slP~~~~p~~~n~pg~~~p~~~~~pa~~~l~~~l~q~a~tAi~De~S~aA~vPiia~~P~E~i 311 (629) T protein:vir:99 232 SKSRLIGNGVVFVPHEMSLPSMNAPVASNKPGAPAPPILGTPAVQQLQELLFQVAQTAYDDEDSMAALIPMFAAAPGELI 311 (629) T ss_pred HHHHHhhCceeEeccCcccCccCCCCCCCCCCcccccccccchHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechHHh Confidence 88877778887765432110 112222221 111222222 233332 Q ss_pred CCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHc-CCcccccchHH-H-HHHHHHHHHHHHHHHHHHHHHHHhhh Q lcl|Aclame:pro 248 DLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGDQQSSIQ-Q-ISGMYASALNRYLRPAISELEYKLSD 324 (392) Q Consensus 248 ~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~~~~~~~-~-~~~~~~~~l~p~l~~i~~~l~~~l~~ 324 (392) ++.+.-.+.....+ --+.+|+..+..+|...-|||+.| |..++.+-+.. + ...-++..|+|.+..|+++|+..+++ T Consensus 312 ~~i~hlkf~~ei~e-~aiktR~daI~RlA~glDippE~LLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~AlT~~~Lr 390 (629) T protein:vir:99 312 KNVTHLKFDNQVTE-VAIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVRLHILPPVEMLCEAITNQVLR 390 (629) T ss_pred cCeeEEeecCchhH-HHHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchhHHHHHHHHHhhHHH Confidence 33344444433333 347899999999999999999965 54345442221 1 12335678999999999999988764 Q ss_pred ----hhcccchhh---hhcchH----HHHHHHHHHHhCCCcCHHHHHHHHHh---CCC--Cccc------------cccc Q lcl|Aclame:pro 325 ----HISVNMRPA---IDPLGD----NYLSTISTATRWGALAENQATFVLQE---AGY--IPKD------------LPAP 376 (392) Q Consensus 325 ----~~~~d~~~~---~~~~~~----~~~~~~~~~~~~g~~T~nE~R~~l~~---~g~--~~~e------------~~~~ 376 (392) ..++|-... ++.+.. .+...+..++..|.+|-...|+.|+. .|+ ...| .|++ T Consensus 391 p~Le~eGiDp~kYvvW~DaS~Lt~dPd~~deA~~a~drGAIt~eAlrk~lGf~eD~~yd~tt~E~~~~~a~d~V~~~P~L 470 (629) T protein:vir:99 391 TVLMREGIDPNAYVVWHDASQLTVDPDKTDEARDAFDRGAITAEAMVKMLGLADDTVYDFTTPEGWAQWARDRVGQDPNL 470 (629) T ss_pred HHHHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCCccHHHHHHHhcCccccccCCCchHHHHHHHHHhhhhCcch Confidence 334443321 121111 12345667788999999999988742 122 1111 1111 Q ss_pred ------------cC--------CCCC--CCCC--------CCCCCC Q lcl|Aclame:pro 377 ------------EN--------TNKK--TTGQ--------SNEPVP 392 (392) Q Consensus 377 ------------e~--------~~~~--~~gd--------~~~p~p 392 (392) +. ++|. .+|+ +++|.+ T Consensus 471 i~~~a~l~~~~a~~~~P~~~~~~pp~~e~~~~dE~sga~~~~ep~t 516 (629) T protein:vir:99 471 LPTLAVLIPELADVEFPTPTVALPPAEEQDGDEEASGASRREEPDT 516 (629) T ss_pred hhhhhhhhhhhcccccCccCCCCCccccCCCcccccCCCcCCCCCC Confidence 00 0111 0011 001111 No 143 >protein:vir:7768 Length: 484 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:149 # MgeName: Bxz2 # Cross-refs: genbank:acc:NP_817602;genbank:gi:29566032;genbank:GeneID:1259226 Probab=98.74 E-value=7.2e-08 Score=59.74 Aligned_cols=373 Identities=11% Similarity=0.032 Sum_probs=154.6 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhh---hhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARA---ALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) +.=.+.+.+......-. ....+ ..+.. .+ ...+..+..+. ...+....-+|+.++..+--..+.+-+. T Consensus 16 ~~~~l~~~~~~~~~rl~--~l~~Y-y~G~~-----~i-~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~~~~ 86 (484) T protein:vir:77 16 AREEMLNLFTERTQDLG--DNTAY-YESER-----RP-DAVGVTVPQQMQKLLAHVGYPRLYIDAIAARQELEGFRLGGA 86 (484) T ss_pred HHHHHHHHHHHHHHHHH--HHHHH-Hhccc-----cc-hhcccccchhHHhhhhhcCcHHHHHHHHHhhhccCceecCCc Confidence 11112222211110000 00000 00000 00 00011111110 0111222334555554432233333221 Q ss_pred cc-ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCce-------EEEEEeccccceeeecCccceEEEEE-- Q lcl|Aclame:pro 78 KN-QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGAD-------MKWEYLRPSQVNTYYFEYENGMYYNI-- 147 (392) Q Consensus 78 ~~-~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~-------~~l~~l~~~~v~~~~~~~~~~~~~~~-- 147 (392) +. ...+.+-...-........+..+.+.+|.+|+.+.++.+|.+ ..+.+++|..+.+.++...+.+...+ T Consensus 87 ~~~~~~l~~i~~~N~~d~~~~~~~~~a~~~G~a~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~~~~D~~~~~~~~a~~~ 166 (484) T protein:vir:77 87 DKADEQLWDWWQANDLDIESTLGHTDSLVHGRSYITISKPDPNIDPGVDPEVPIIRVEPPTNLYAQIDPRTRQVMRAIRA 166 (484) T ss_pred chhHHHHHHHHHhcCHhHHHHHHHHHHhhcCceEEEEecCCCCcccccccccceEEEeccceeEEEecCCCCceEEEEEE Confidence 11 111111111122334557788899999999999988887753 24677888888776665332211110 Q ss_pred Eec-----------------------Ccce----eeeEEEeceeEEEecCCCcccccccCCHHHH-HHHHHHHHHHHHHH Q lcl|Aclame:pro 148 TFD-----------------------DPKI----EPILQAPQSDLIHMKLLSIDGGKTGISPLYS-LRRESKIQRASDRL 199 (392) Q Consensus 148 ~~~-----------------------~~~~----~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~-~~~~i~~~~~~~~~ 199 (392) ... .+.. .....+..-.|+|+.++...+...|.|.+.. +...++....+... T Consensus 167 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~N~~~~~~~~G~s~i~~~v~~L~Da~~~~~s~ 246 (484) T protein:vir:77 167 IEDEEGNEVIGATLYLPNNTVIWNREDGQWVQVANVAHNLEMVPVIPIPNRTRLSDLYGTTEITPELRSVTDAAARTLML 246 (484) T ss_pred EEeecCCcEEEEEEEecCeEEEEEecCCceEeeccccCCCCCcceEEeccccccCccCCcccchHHHHHHHHHHHHHHHH Confidence 000 0000 0011122334566666555555678886642 22333333322222 Q ss_pred HHHHHHcCCCcceEEEe-CCCC-CchHHHHHHHHHHHhccccCCceeecc-CCceEeecccChhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 200 TISSLNSSLNVPGVLTV-KGGG-LLSDKDKASRSRSFMKRSRSGGPVVLD-DLEEFTALEIKSNVAQLLSQTDWTSKQYA 276 (392) Q Consensus 200 ~~~~~~ng~~~~~il~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~~~vl~-~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia 276 (392) ......-.+.|..++.. ..+. ...+.......+ ...+.++.++ ++.++.++...+-+ -+++..+.....|+ T Consensus 247 ~~~~~~~~a~p~~~i~G~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~q~~~~~~e-~~~~~l~~~i~~~s 320 (484) T protein:vir:77 247 MQATAELMGVPQRLLFGVKGEELGVDPETGQTLFD-----AYLARILAFEDHESKAQQFSAAELR-NFVDALDALDRKAA 320 (484) T ss_pred HHHHHHhhhhhHHHHhCCCcchhcccccccchhhh-----hhhhhhcccCCCCceeEeecCCChH-HHHHHHHHHHHHHh Confidence 22222222334333331 1110 001111011111 1123455555 46788777654433 37888888899999 Q ss_pred HHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------------------hhcccchhhhhcc Q lcl|Aclame:pro 277 KVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD-------------------HISVNMRPAIDPL 337 (392) Q Consensus 277 ~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~-------------------~~~~d~~~~~~~~ 337 (392) .+-++|++.+|+...+.++.++.+.. ...+.-.+...+..|...|-. .+++.+..-...+ T Consensus 321 ~~~~~p~~~fg~~~~n~~Sg~Al~~~-~~~l~~ka~~k~~~f~~~l~~~~~l~~~~~~~~~~~~~~~~i~v~w~~~~~~s 399 (484) T protein:vir:77 321 AYTGLPPYYLSFSSENPASAEAIRSS-ESRLVKTVERKNKIFGGAWEQAMRVAYKVMNGGDIPPEYYRMESIWRDPSTPT 399 (484) T ss_pred cccCCCHHHhccccCcchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccceEEecCCCCCC Confidence 99999999998755443344443322 222222223322222222110 1122222222345 Q ss_pred hHHHHHHHHHHHhCC--CcCHHHHHHHHHhCCCCcccccc------------------ccCCCCCCCCCC-------CCC Q lcl|Aclame:pro 338 GDNYLSTISTATRWG--ALAENQATFVLQEAGYIPKDLPA------------------PENTNKKTTGQS-------NEP 390 (392) Q Consensus 338 ~~~~~~~~~~~~~~g--~~T~nE~R~~l~~~g~~~~e~~~------------------~e~~~~~~~gd~-------~~p 390 (392) ..+.+..+.++.++| +++..-++++| |+.++++.+ +.+..+..+|+. .+| T Consensus 400 ~~~~ad~~~kl~~~g~gi~s~et~~~~l---~~~~~~~~e~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (484) T protein:vir:77 400 YAAKADAATKLYNNGQGVIPKERARIDM---GYSITEREEMRKWDEEEQAQGLGLMGTMFGTDPSGGGNPDNPETPEPQP 476 (484) T ss_pred HHHHHHHHHHHHhccCCCCCHHHHHhcC---CCChhHHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCCCcccccC Confidence 556677778888765 77776666655 554432111 011111112222 223 Q ss_pred CC Q lcl|Aclame:pro 391 VP 392 (392) Q Consensus 391 ~p 392 (392) .| T Consensus 477 ~~ 478 (484) T protein:vir:77 477 NP 478 (484) T ss_pred CC Confidence 33 No 144 >protein:vir:99916 Length: 504 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1611 # MgeName: Halo # Cross-refs: genbank:acc:YP_655520;genbank:gi:109392290;genbank:GeneID:4157085 Probab=98.71 E-value=9.1e-08 Score=59.20 Aligned_cols=375 Identities=10% Similarity=-0.019 Sum_probs=144.4 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhh---hcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAA---LRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a---~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) ..-.+++.+.+....-. .... +..+.. .+ ...+..+..+.. ..+....-+|+.+++.+---.|.+-+. T Consensus 25 ~i~~L~~~~~~~~~r~~--~l~~-YY~G~~-----~i-~~~~~~~p~~~~~~~~v~n~~~~iVd~~a~rl~~~Gf~~~d~ 95 (504) T protein:vir:99 25 KVNGLYQQLVDRTPRNL--LRAS-FYDGKY-----AI-RQIGNLIPPEYLRTATVLGWSAKAVDTLARRCNLESFVWPDG 95 (504) T ss_pred HHHHHHHHHHHHhHHHH--HHHH-HHhccc-----cc-hhccccccHHHHHHhhccCcHHHHHHHHHhhhccceeeCCCC Confidence 11111111111110000 0000 000000 00 000011111100 001112234555554332222322221 Q ss_pred cc-cccc---ccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceE-EEEEeccccceeeecCccceEEEEE--E-e Q lcl|Aclame:pro 78 KN-QGII---DNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADM-KWEYLRPSQVNTYYFEYENGMYYNI--T-F 149 (392) Q Consensus 78 ~~-~~~~---~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~-~l~~l~~~~v~~~~~~~~~~~~~~~--~-~ 149 (392) .. ..-+ .+-|.. ......+..+.+.+|.+|+.+..+.+|++. .+.+++|..+.+.+++..+.+...+ . . T Consensus 96 ~~~~~~l~~i~~~N~l---d~~~~~~~~~a~iyG~af~~v~~~~d~~~~~~I~~~sP~~~~~iyD~~~~~~~~a~~~~~~ 172 (504) T protein:vir:99 96 DYGSIGGPDVWDENFF---ATKANNAMVSSLIHGPAFLINTEGGAGEPDSLIHVKSAMQATGEWNSRRNAMDSLLSITSR 172 (504) T ss_pred ChhhHHHHHHHHhcCh---hhHHHHHHHHHHhhCceeEEEecCCCCCceeEEEEeccceeEEEEeCCCCceeEEEEEEEe Confidence 11 1111 222332 334567888899999999999988888764 5678899998887766444322111 1 1 Q ss_pred c-CcceeeeEEEecee------------------------EEEecCCCcccccccCCHH----HHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 150 D-DPKIEPILQAPQSD------------------------LIHMKLLSIDGGKTGISPL----YSLRRESKIQRASDRLT 200 (392) Q Consensus 150 ~-~~~~~~~~~~~~~~------------------------vih~~~~~~~~~~~G~s~~----~~~~~~i~~~~~~~~~~ 200 (392) + ++.......+.++. |+++.++...+..+|.|.+ ..+.+.+.....-.... T Consensus 173 d~~g~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~gvPvV~~~n~~~~~~~~G~sei~~~v~~l~Da~~~~~~~~~~~ 252 (504) T protein:vir:99 173 DAEGHPTGIALYEDGVTVTADMDDDGDWHADVRTHKLGVPVEVLPYKPREDRPLGSSRITRPVMSLQQRALKGCIRMDGH 252 (504) T ss_pred cCCCeEEEEEEEcCCcEEEEEEcCCceeeeccccCCCCcceEEecccccCccccCcccchhhHHHHHHHHHHHHHHHHHH Confidence 1 11000111222332 4444444333445677754 23333333322222233 Q ss_pred HHHHHcCCCcceEEE-eCC-CCCchHHH-HHHHH---HHHhccccCCceeec-cCCceEeecccChhhHHHHHHHHHHHH Q lcl|Aclame:pro 201 ISSLNSSLNVPGVLT-VKG-GGLLSDKD-KASRS---RSFMKRSRSGGPVVL-DDLEEFTALEIKSNVAQLLSQTDWTSK 273 (392) Q Consensus 201 ~~~~~ng~~~~~il~-~~~-~~~~~~~~-~~~~~---~~~~~~~~~g~~~vl-~~g~~~~~l~~~~~d~~~~e~~~~~~~ 273 (392) ..+|.. |.-++. ... ....++.. ...+. .............+. ..+.++.++....-+ .|++..+..+. T Consensus 253 ~e~~a~---p~r~i~G~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~q~~~~~l~-~~~~~l~~~i~ 328 (504) T protein:vir:99 253 ADVYSF---PQLILLGADAKNFRNKDGSMKPAWQIALARVFALPDDEDEPDAARARADVKQFPASSPQ-PHIEMLEQIAM 328 (504) T ss_pred HHHhcc---hhhhhccCCccccccccccccchhhhhhhhhhcCCCccccccccCccceeeecCCCChH-HHHHHHHHHHH Confidence 333332 322222 111 11111111 11111 111111111111111 234566666543322 48899999999 Q ss_pred HHHHHhcccHHHcCCccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------------hhcccchh Q lcl|Aclame:pro 274 QYAKVYGLPDSYIGGQGD-QQSSIQQISGMYASALNRYLRPAISELEYKLSD--------------------HISVNMRP 332 (392) Q Consensus 274 ~Ia~~fgVP~~~lg~~~~-~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~--------------------~~~~d~~~ 332 (392) .||.+-++|++.+|..+. +.++.++++ +-...+.-.+......|...|-. .+++.+.. T Consensus 329 ~~a~~t~~P~~~lG~~~~~n~sSa~Ai~-~~~~~L~~ka~~k~~~f~~~l~~~~rla~~~~~~~~~~~~~~~~~~v~w~d 407 (504) T protein:vir:99 329 MFSGETSIPVESLGFSNRANPTSADAYI-ASREDLIAEAEGATDDWSPAFRRSMIRALAIKNGLDRIPPEWKTIDSKFRS 407 (504) T ss_pred HHHhhhCCCHHHhcccccccccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccceeEecC Confidence 999999999999996544 333444433 22222222233333333222210 01111111 Q ss_pred hhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccc----------------cCCCC-CCCC---------- Q lcl|Aclame:pro 333 AIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAP----------------ENTNK-KTTG---------- 385 (392) Q Consensus 333 ~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~----------------e~~~~-~~~g---------- 385 (392) ....+..+.+..+.+++++|....-+.+..+...|+.+.++.++ .+..+ ..++ T Consensus 408 ~~~~s~a~~aDa~~Kl~~ag~~l~~~~~~l~~~lg~~~~ei~r~~~e~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 487 (504) T protein:vir:99 408 PLYLSKAAQADAGAKMLGAGPEWLKETEVGLELLGLTPQQAKRALAERRRASSVSIIEALNRRQQEAATAGEDQDQGAGE 487 (504) T ss_pred CCccCHHHHHHHHHHHHhhccccccchHHHHhhcCCCHHHHHHHHHHHHHHhhHHHHHHHhcccCCCCCCCCCCCcCCCC Confidence 22234455667777888877532211111122225544332110 00000 0111 Q ss_pred ------CCCCCCC Q lcl|Aclame:pro 386 ------QSNEPVP 392 (392) Q Consensus 386 ------d~~~p~p 392 (392) ++.-+.| T Consensus 488 ~a~~~~~~~~~~p 500 (504) T protein:vir:99 488 PPANEPPAALGRP 500 (504) T ss_pred CCCCCCCccCCCc Confidence 1111222 No 145 >protein:vir:105819 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1636 # MgeName: PMC # Cross-refs: genbank:acc:YP_655764;genbank:gi:109522087;genbank:GeneID:4157627 Probab=98.67 E-value=5.5e-08 Score=60.37 Aligned_cols=377 Identities=11% Similarity=0.016 Sum_probs=168.7 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCccc-chhhhhcchHHHHHHHHHHHhhhhCceeeecccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWV-SARAALRNSDLFSIILQLSSDLAIVKINAEKKKN 79 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~ 79 (392) +...+.+........- .....+ ..+... . ..+........ ....-..+....-+|+..++.+-.-|+.+-..+. T Consensus 9 ~~~~l~~~~~~~~~r~--~~l~~Y-y~g~~~-i-~~~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~~~~~~~~~d 83 (456) T protein:vir:10 9 WLPVLTKRIDDGMSRV--RLLARY-SNGDAP-L-PELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVGGSAD 83 (456) T ss_pred HHHHHHHHHHHHHHHH--HHHHHH-HhcCCC-c-hhcCcccChhhhhhhhhhhcchHHHHHHHHHhhhccCCeecCCCCC Confidence 1111222211111000 000000 000000 0 00000000000 0000011223455777777777667776643221 Q ss_pred -c--cc---cccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEE----EEEEe Q lcl|Aclame:pro 80 -Q--GI---IDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMY----YNITF 149 (392) Q Consensus 80 -~--~~---~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~----~~~~~ 149 (392) + .. ..+-| ....+...+..+++.+|.+|.++..+.+|.+. +..++|..+.+.++....... .++.. T Consensus 84 ~~~~~~~~~i~~~N---~~d~~~~~~~~~a~i~G~ay~~v~~d~~g~~~-i~~~~p~~~~~i~d~~~~~~~~~~i~~~~~ 159 (456) T protein:vir:10 84 SDLALRARRIWRDN---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTAT-ITADSPETMVVSVDPLQPWRIRAAMRWWRD 159 (456) T ss_pred cchHHHHHHHHHhc---ChhhHHHHHHHHHhhcCeeEEEEeeCCCCceE-EEEEccceeEEEEcCCCCcceEEEEEEEEe Confidence 1 11 11223 22344566888899999999999888888765 577888888887765432110 01100 Q ss_pred cCccee-------------------------eeEEEeceeE------EEecCCCc---ccccccCCHHHHHHHHHHHHHH Q lcl|Aclame:pro 150 DDPKIE-------------------------PILQAPQSDL------IHMKLLSI---DGGKTGISPLYSLRRESKIQRA 195 (392) Q Consensus 150 ~~~~~~-------------------------~~~~~~~~~v------ih~~~~~~---~~~~~G~s~~~~~~~~i~~~~~ 195 (392) .+.... .......... -|.-...+ .....|+|.+......++.... T Consensus 160 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~g~gd~e~vi~liDa~~~ 239 (456) T protein:vir:10 160 LDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHIDIINRINR 239 (456) T ss_pred cCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEEEecCCCCCchhhhhHHHHHHHHH Confidence 000000 0000000000 00000000 0113478888877666666554 Q ss_pred HHHHHHHHHHcCCCcceEEEeC-CCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 196 SDRLTISSLNSSLNVPGVLTVK-GGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQ 274 (392) Q Consensus 196 ~~~~~~~~~~ng~~~~~il~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~ 274 (392) +.--..+.....+.|..++... ......+..-........-....+.++.++++.++..+....- ..+.+..+....+ T Consensus 240 ~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~-~~~~~~l~~~i~~ 318 (456) T protein:vir:10 240 AELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEAAPGALWELPPGVDIWESQANDF-TPMLSAIKEHIRQ 318 (456) T ss_pred HHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhhhccccccCCCCcceEEecccCh-hHHHHHHHHHHHH Confidence 4433333323223333233211 1110001100000000001112345667788889887764332 2388889999999 Q ss_pred HHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------hhcccchhhhhcchH Q lcl|Aclame:pro 275 YAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD---------------HISVNMRPAIDPLGD 339 (392) Q Consensus 275 Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~---------------~~~~d~~~~~~~~~~ 339 (392) |++.-++|++.+|+...+. +.++++. -...+.--+...+..|...|-. .++..+......+.. T Consensus 319 ~~~~s~~p~~~~~~~~~N~-Sg~Ai~~-~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~g~~~~~~~~v~w~~~~~~~~~ 396 (456) T protein:vir:10 319 LSSATKTPLPMLMPDSANQ-SAEGAHN-IEKGFLFKCEDRLSIAKIGLEAILVKALQIEGESVEDTVDVSFESPDRVTLG 396 (456) T ss_pred HHhccCCChHHhcccccCh-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccceeEEecCCCCcCHH Confidence 9999999999998754333 3333332 2222333333333333332211 111122222234555 Q ss_pred HHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccc------cccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 340 NYLSTISTATRWGALAENQATFVLQEAGYIPKDLP------APENTNKKTTGQSNEPVP 392 (392) Q Consensus 340 ~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~------~~e~~~~~~~gd~~~p~p 392 (392) +.+..+.++.+.|+.+..-+++++ |+.+.++. ..+......++-.+.|.| T Consensus 397 ~~ada~~kl~~~gi~~~~~~~~~l---g~~~~~i~~~e~er~~~e~~~~~~~~~~~~~~ 452 (456) T protein:vir:10 397 EKYSAASLAKAAGESWASIRRNIL---NYNADQIKQDDLDRAREQITLFAGNPVQRPQE 452 (456) T ss_pred HHHHHHHHHHHcCCChHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhhhhhhcCCC Confidence 677778888889999998888776 77765432 223233333343455666 No 146 >protein:vir:102602 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:1661 # MgeName: Llij # Cross-refs: genbank:acc:YP_654999;genbank:gi:109392189;genbank:GeneID:4157224 Probab=98.67 E-value=5.5e-08 Score=60.37 Aligned_cols=377 Identities=11% Similarity=0.016 Sum_probs=168.7 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCccc-chhhhhcchHHHHHHHHHHHhhhhCceeeecccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWV-SARAALRNSDLFSIILQLSSDLAIVKINAEKKKN 79 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~ 79 (392) +...+.+........- .....+ ..+... . ..+........ ....-..+....-+|+..++.+-.-|+.+-..+. T Consensus 9 ~~~~l~~~~~~~~~r~--~~l~~Y-y~g~~~-i-~~~~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~~~~~~~~~~~d 83 (456) T protein:vir:10 9 WLPVLTKRIDDGMSRV--RLLARY-SNGDAP-L-PELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVGGSAD 83 (456) T ss_pred HHHHHHHHHHHHHHHH--HHHHHH-HhcCCC-c-hhcCcccChhhhhhhhhhhcchHHHHHHHHHhhhccCCeecCCCCC Confidence 1111222211111000 000000 000000 0 00000000000 0000011223455777777777667776643221 Q ss_pred -c--cc---cccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEE----EEEEe Q lcl|Aclame:pro 80 -Q--GI---IDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMY----YNITF 149 (392) Q Consensus 80 -~--~~---~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~----~~~~~ 149 (392) + .. ..+-| ....+...+..+++.+|.+|.++..+.+|.+. +..++|..+.+.++....... .++.. T Consensus 84 ~~~~~~~~~i~~~N---~~d~~~~~~~~~a~i~G~ay~~v~~d~~g~~~-i~~~~p~~~~~i~d~~~~~~~~~~i~~~~~ 159 (456) T protein:vir:10 84 SDLALRARRIWRDN---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTAT-ITADSPETMVVSVDPLQPWRIRAAMRWWRD 159 (456) T ss_pred cchHHHHHHHHHhc---ChhhHHHHHHHHHhhcCeeEEEEeeCCCCceE-EEEEccceeEEEEcCCCCcceEEEEEEEEe Confidence 1 11 11223 22344566888899999999999888888765 577888888887765432110 01100 Q ss_pred cCccee-------------------------eeEEEeceeE------EEecCCCc---ccccccCCHHHHHHHHHHHHHH Q lcl|Aclame:pro 150 DDPKIE-------------------------PILQAPQSDL------IHMKLLSI---DGGKTGISPLYSLRRESKIQRA 195 (392) Q Consensus 150 ~~~~~~-------------------------~~~~~~~~~v------ih~~~~~~---~~~~~G~s~~~~~~~~i~~~~~ 195 (392) .+.... .......... -|.-...+ .....|+|.+......++.... T Consensus 160 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~g~gd~e~vi~liDa~~~ 239 (456) T protein:vir:10 160 LDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHIDIINRINR 239 (456) T ss_pred cCCceeEEEEEeccceeEEEEEEEEeecccceeeeecCCceeeccccCCCCCceeEEEecCCCCCchhhhhHHHHHHHHH Confidence 000000 0000000000 00000000 0113478888877666666554 Q ss_pred HHHHHHHHHHcCCCcceEEEeC-CCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 196 SDRLTISSLNSSLNVPGVLTVK-GGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQ 274 (392) Q Consensus 196 ~~~~~~~~~~ng~~~~~il~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~ 274 (392) +.--..+.....+.|..++... ......+..-........-....+.++.++++.++..+....- ..+.+..+....+ T Consensus 240 ~~s~~~~~~~~~a~~~~~i~G~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~-~~~~~~l~~~i~~ 318 (456) T protein:vir:10 240 AELQLLSTMAIQAFRQRALKSTEHGLPNVDENGNAIDYASIFEAAPGALWELPPGVDIWESQANDF-TPMLSAIKEHIRQ 318 (456) T ss_pred HHHHHHHHHHHhhhHhHhhhccCcccccccccccccchhhhhhhhccccccCCCCcceEEecccCh-hHHHHHHHHHHHH Confidence 4433333323223333233211 1110001100000000001112345667788889887764332 2388889999999 Q ss_pred HHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------hhcccchhhhhcchH Q lcl|Aclame:pro 275 YAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD---------------HISVNMRPAIDPLGD 339 (392) Q Consensus 275 Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~---------------~~~~d~~~~~~~~~~ 339 (392) |++.-++|++.+|+...+. +.++++. -...+.--+...+..|...|-. .++..+......+.. T Consensus 319 ~~~~s~~p~~~~~~~~~N~-Sg~Ai~~-~~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~g~~~~~~~~v~w~~~~~~~~~ 396 (456) T protein:vir:10 319 LSSATKTPLPMLMPDSANQ-SAEGAHN-IEKGFLFKCEDRLSIAKIGLEAILVKALQIEGESVEDTVDVSFESPDRVTLG 396 (456) T ss_pred HHhccCCChHHhcccccCh-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccceeEEecCCCCcCHH Confidence 9999999999998754333 3333332 2222333333333333332211 111122222234555 Q ss_pred HHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccc------cccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 340 NYLSTISTATRWGALAENQATFVLQEAGYIPKDLP------APENTNKKTTGQSNEPVP 392 (392) Q Consensus 340 ~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~------~~e~~~~~~~gd~~~p~p 392 (392) +.+..+.++.+.|+.+..-+++++ |+.+.++. ..+......++-.+.|.| T Consensus 397 ~~ada~~kl~~~gi~~~~~~~~~l---g~~~~~i~~~e~er~~~e~~~~~~~~~~~~~~ 452 (456) T protein:vir:10 397 EKYSAASLAKAAGESWASIRRNIL---NYNADQIKQDDLDRAREQITLFAGNPVQRPQE 452 (456) T ss_pred HHHHHHHHHHHcCCChHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhhhhhhcCCC Confidence 677778888889999998888776 77765432 223233333343455666 No 147 >protein:vir:7987 Length: 456 # NCBI annotation: gp3 # Family: family:all:5096 # MgeID: mge:151 # MgeName: Che8 # Cross-refs: genbank:acc:NP_817341;genbank:gi:29565769;genbank:GeneID:1258964 Probab=98.67 E-value=3.1e-08 Score=61.78 Aligned_cols=377 Identities=11% Similarity=0.025 Sum_probs=165.1 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccc-hhhhhcchHHHHHHHHHHHhhhhCceeeecccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVS-ARAALRNSDLFSIILQLSSDLAIVKINAEKKKN 79 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~ 79 (392) ....+.+........- .....+. .+... + ..+......... ...-+.+.....+|+..++.+-.-|+.+...+. T Consensus 9 ~~~~l~~~~~~~~~r~--~~l~~Yy-~g~~~-i-~~~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~~~~~d 83 (456) T protein:vir:79 9 WLPVLTKRIDDGMSRV--RLLARYS-NGDAP-L-PELTRNTSAAWRSFQREARTNWGLMVRDSVADRIIPNGITVGGSAD 83 (456) T ss_pred HHHHHHHHHHHHHHHH--HHHHHHH-hccCC-h-hhcCcccChhhchhhhhhhcchHHHHHHHHHhhhccCCeecCCCCC Confidence 1111111111110000 0000000 00000 0 000000000000 000011123355777777776666776543221 Q ss_pred cc---c---cccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccce-E--EEEEEec Q lcl|Aclame:pro 80 QG---I---IDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENG-M--YYNITFD 150 (392) Q Consensus 80 ~~---~---~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~-~--~~~~~~~ 150 (392) .. . +..-| ....+.+.+..+.+.+|.||.++..+.+|.+ .+..++|..+.+.++..... + ...+... T Consensus 84 ~~~~~~~~~~~~~n---~~d~~~~~~~~~a~~~G~a~~~~~~~edg~~-~i~~~~p~~~~~i~d~~~~~~~~~~~~~~~~ 159 (456) T protein:vir:79 84 SDLALRARRIWRDN---RMDSVCKQWVKYGLDFGESYLTCWRRDDGTA-TITADSPETMVVSVDPLQPWRIRSAMRWWRD 159 (456) T ss_pred ccHHHHHHHHHHhc---ChhHHHHHHHHHHhhcCeeEEEEeeCCCCce-EEEEeccceeEEEEcCCCCCceEEEEEEEEe Confidence 11 1 11123 2234456788999999999999888889987 47888898888776643221 1 0011100 Q ss_pred Ccceee-eEE-------------------------------EeceeEEEecCCC---cccccccCCHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 DPKIEP-ILQ-------------------------------APQSDLIHMKLLS---IDGGKTGISPLYSLRRESKIQRA 195 (392) Q Consensus 151 ~~~~~~-~~~-------------------------------~~~~~vih~~~~~---~~~~~~G~s~~~~~~~~i~~~~~ 195 (392) ...... ... ....++-|.-... +.....|+|.+......++.... T Consensus 160 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvv~~~N~~~~gd~e~v~~liD~~~~ 239 (456) T protein:vir:79 160 LDAESDFAIVWSGDGWQKFARPCFVQSSSRRRLVTRISDSWVPVGDAVVTGSPPPVVVYQNPDGMGEVEPHIDIINRINR 239 (456) T ss_pred cCCceeEEEEEcCCceEEEEEEEEeeccccceeeeccCCceeecccccCCCCceeEEEecCCCCCchhhhhHHHHHHHHH Confidence 000000 000 0000111110000 00112467777776665555443 Q ss_pred HHHHHHHHHHcCCCcceEEEeCC-CCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 196 SDRLTISSLNSSLNVPGVLTVKG-GGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQ 274 (392) Q Consensus 196 ~~~~~~~~~~ng~~~~~il~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~ 274 (392) +.--........+.|..++.... .....++.-........-....+.++.++++.++..+..++- ..+.+..+....+ T Consensus 240 ~~s~~~~~~~~~a~~~~~~~G~~~~~~~~d~~g~~i~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~-~~~~~~l~~~i~~ 318 (456) T protein:vir:79 240 AELQLLSTMAIQAFRQRALKSSEHRLPKVDENGNAIDYASIFEAAPGALWELPPGVDIWESQTNDF-TPMLSAIKEHIRQ 318 (456) T ss_pred HHHHHHHHHHHHhhHHHHHhcCCcccccccccccccchhhhhhhhccccccCCCCcceeeecccCh-HHHHHHHHHHHHH Confidence 33222222222222322222111 000001000000000000112345666788888877664432 2378889999999 Q ss_pred HHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------hhcccchhhhhcchH Q lcl|Aclame:pro 275 YAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD---------------HISVNMRPAIDPLGD 339 (392) Q Consensus 275 Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~---------------~~~~d~~~~~~~~~~ 339 (392) |+..-++|++.+|+...+. +.++.+.. ...+.--+...+..|...|-. .++..+..-...+.. T Consensus 319 i~~~t~~p~~~~~~~~~N~-Sg~Al~~~-~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~g~~~~~~i~v~w~~~~~~s~~ 396 (456) T protein:vir:79 319 LSSATKTPLPMLMPDSANQ-SAEGAHNI-EKGFLFKCEDRLSIAKIGLEAILVKALQIEGESVEDTVDVSFESPDRVTLG 396 (456) T ss_pred HHhhcCCChhHhcccccCc-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccceEEeCCCCCcCHH Confidence 9999999999998654333 23333322 222222233333333332211 111111122223445 Q ss_pred HHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccc------cccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 340 NYLSTISTATRWGALAENQATFVLQEAGYIPKDLP------APENTNKKTTGQSNEPVP 392 (392) Q Consensus 340 ~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~------~~e~~~~~~~gd~~~p~p 392 (392) +.+..+.++.+.|+.+...+++++ |+.+.++. ..+..+...++-.+.|.| T Consensus 397 ~~ada~~kl~~~G~~~~~~~~~~l---g~~~~~i~~~e~~r~~~e~~~~~~~~~~~~~~ 452 (456) T protein:vir:79 397 EKYSAASLAKAAGESWASIRRNIL---NYNADQIKQDDLDRAREQITLFAGNPVQRPQE 452 (456) T ss_pred HHHHHHHHHHhcCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhhHhhcCCC Confidence 667777888889999998777765 77765432 223344444455556666 No 148 >protein:vir:102426 Length: 631 # NCBI annotation: gp11 # Family: family:all:2798 # MgeID: mge:1618 # MgeName: Pipefish # Cross-refs: genbank:acc:YP_655288;genbank:gi:109521851;genbank:GeneID:4157741 Probab=98.65 E-value=1.8e-08 Score=63.08 Aligned_cols=385 Identities=12% Similarity=0.047 Sum_probs=198.8 Q ss_pred Ccch-hhHhhccccccccccc-----ccccccccchhhhhhhhcCCC-Ccccchhhhh-cchHHHHHHHHHHHhhhhCce Q lcl|Aclame:pro 1 MILP-ILNFINQTNDPPEVGS-----VQSYFPDGNDAQIMESLLGDN-NEWVSARAAL-RNSDLFSIILQLSSDLAIVKI 72 (392) Q Consensus 1 m~Mg-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~a~-~~~~v~~~i~~ia~~ia~~p~ 72 (392) |.-. =++..++.+-.+..+. .+.+.++..-...+....+.. ......-.++ .+|.+...+..|+++++++.+ T Consensus 1 ~~a~~~lr~~rrpkg~~~a~~r~L~aAs~~~~dpg~~~~~~~g~~~~~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~rL 80 (631) T protein:vir:10 1 MAATQSLRLVRRPKGGRPAPSRALTAASQPLPDPSQVFSKSTGISRNSDWQTDAWEAVDLVGELRYYVGWRASSCSRCRL 80 (631) T ss_pred CCcccceeeeecCCCCCccchhhhhhhhccccchhhhhhhhcCCcccchhhHHHHHHHHhhhhHHHHhhhhhhhhceeee Confidence 2221 1333333332221111 111221111111111111111 1111111111 346677788889999999988 Q ss_pred eeeccccc-----c---------------ccccCCccCCHHHHHHHHHHHHHHhCCeeEEEe-eccCC---------ce- Q lcl|Aclame:pro 73 NAEKKKNQ-----G---------------IIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRW-RNANG---------AD- 121 (392) Q Consensus 73 ~~~~~~~~-----~---------------~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~-r~~~G---------~~- 121 (392) ..-+-+.+ . ...-+-..+...++++.+..++..-|++|+.+. +..+| ++ T Consensus 81 ~as~idpDtg~ptg~iee~~~~~~~v~~~~~~i~gG~lgQ~~llkrl~~~ltV~GE~wiv~l~~p~~~~~~~pd~~~r~~ 160 (631) T protein:vir:10 81 VASELDENTGLPTGGISEDNTEGERVREIVSKIADGTLGQAALTKRVVECLTVPGELWIVILTRPVKGAPAQPDGSVRTR 160 (631) T ss_pred EeeeeccCCCCCccccccCCchhHHHHHHHHhcCCCcchHHHHHHHHHhheecccceEEEEEeccCcCCCCCcccccccc Confidence 76543311 0 112356678899999999999999999999874 22221 22 Q ss_pred EEEEEeccccceeeecCccceEEEEEEecCcceeeeEEEe-ceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 122 MKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAP-QSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLT 200 (392) Q Consensus 122 ~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~ 200 (392) .+.+++....+......++..+.. . . +.+..... .+-++.+=.+.+.....--||+.++...+.......+.. T Consensus 161 ~~W~~vt~~ei~~~~~g~g~~v~l--p-~---g~~h~~~~~~D~l~RiW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i 234 (631) T protein:vir:10 161 QEWYAVSKEEIKKSNKGSGTNIVL--P-T---GEEHEFVKGTDIIFRVWIPKPRKASEPDSPVRAVLDSIREIVRTTKTI 234 (631) T ss_pred cceeeccHHHHhcccCcccceeec--C-C---CCccceecCCceEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHH Confidence 244566666665433222222111 1 1 11222222 233333334445555667899999999999999999998 Q ss_pred HHHHHcCCCcceEEEeCCCCCch-----------------------HHHHHHHHH----HHhccccCC--ceeecc---- Q lcl|Aclame:pro 201 ISSLNSSLNVPGVLTVKGGGLLS-----------------------DKDKASRSR----SFMKRSRSG--GPVVLD---- 247 (392) Q Consensus 201 ~~~~~ng~~~~~il~~~~~~~~~-----------------------~~~~~~~~~----~~~~~~~~g--~~~vl~---- 247 (392) .+..+....-.|++.+++..+-+ ++....+.+ .+...+... -++++. T Consensus 235 ~aaakSRl~gnGvlflP~els~P~~~~~~~~~~g~~v~~~~g~pa~~~l~~~l~q~a~tai~De~S~aA~vPii~~~p~E 314 (631) T protein:vir:10 235 ANASKSRLIGNGVLFVPHEMSLPAAQGPVSEVEGEEIAPLVGEPAVQQLTDMLFQVAETAVEDEDSQAAFIPVIAGVPGE 314 (631) T ss_pred HHHHHHHHhhCceeEeccccccCCCCCCCCCcCCccCCccccchhHHHHHHHHHHHHhhhhcCCCCccceeeeeEeechH Confidence 88888888888888887643321 112222222 111222222 233332 Q ss_pred --CCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHc-CCcccccchHH-H-HHHHHHHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 248 --DLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGDQQSSIQ-Q-ISGMYASALNRYLRPAISELEYKL 322 (392) Q Consensus 248 --~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~~~~~~~-~-~~~~~~~~l~p~l~~i~~~l~~~l 322 (392) ++.+.-.+.....+ --+.+|+..+..+|...-|||+.| |..++.+-+.. + ...-++..|+|.+..|+++|+..+ T Consensus 315 ~i~~i~hlkf~~ei~e-~aiktR~daI~RlA~glDi~pE~LLGlGsd~NHWsAWqI~dedVrlHI~P~l~lic~AlT~q~ 393 (631) T protein:vir:10 315 QIKDVKHIRFDNEITE-VAIKTRNDAIARLAMGLDVSPERLLGLGSQTNHWSAWQISDEDVQLHIAPVMEIFCQALTDQI 393 (631) T ss_pred HhcCeeEEeecCchhH-HHHhhHHHHHHHHHhccCCchhhheeccCCccceEEEEecccceeeecchHHHHHHHHHHhhH Confidence 33344444433333 347899999999999999999965 54345442221 1 123356789999999999999887 Q ss_pred hh----hhcccchh---hhhcchH----HHHHHHHHHHhCCCcCHHHHHHHHHhC---CCCc--cc------------cc Q lcl|Aclame:pro 323 SD----HISVNMRP---AIDPLGD----NYLSTISTATRWGALAENQATFVLQEA---GYIP--KD------------LP 374 (392) Q Consensus 323 ~~----~~~~d~~~---~~~~~~~----~~~~~~~~~~~~g~~T~nE~R~~l~~~---g~~~--~e------------~~ 374 (392) ++ ..++|-.. +++.+.. .+...+..++..|.+|-...|+.|+.. |+.- .| ++ T Consensus 394 Lrp~Le~eGvDp~kYvvW~DaS~Lt~dPdr~deA~qa~drGAIt~eAlrk~lGf~eDd~yd~~t~e~~~~~a~~av~~dp 473 (631) T protein:vir:10 394 LRVTLAREGIDPSKYVVWYDPSQLTIDPDKSDEAKFAYENGAINGEALRKYLGLGDDAGYDFTTREGWVMWAQDAVSKDP 473 (631) T ss_pred HHHHHHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCCcCHHHHHHHhcCchhcccCcCchHHHHHHHHHHhhccc Confidence 64 33444332 1221111 123456778889999999999988421 1110 00 01 Q ss_pred ccc-CC------------CC-----CCC----------CCCCCCCC Q lcl|Aclame:pro 375 APE-NT------------NK-----KTT----------GQSNEPVP 392 (392) Q Consensus 375 ~~e-~~------------~~-----~~~----------gd~~~p~p 392 (392) ++. .+ +| ..+ +++..+.| T Consensus 474 aLip~lApl~~~~~~~v~~P~~~a~~~~g~ed~~~~~~~~~g~~ep 519 (631) T protein:vir:10 474 TLIPMLAPLIAGVLKQIEFPQQQAIDSGGNEDTSDADDLDDGEQEP 519 (631) T ss_pred CcchhhHHHHHHHhhhccCCCCCCCCCCCCCccccccccccCCCCC Confidence 100 00 00 011 11111222 No 149 >protein:vir:104082 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:1656 # MgeName: Che12 # Cross-refs: genbank:acc:YP_655593;genbank:gi:109392464;genbank:GeneID:4156950 Probab=98.64 E-value=1e-07 Score=58.86 Aligned_cols=370 Identities=11% Similarity=0.036 Sum_probs=152.9 Q ss_pred Ccc-hhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchh---hhhcchHHHHHHHHHHHhhhhCceeeec Q lcl|Aclame:pro 1 MIL-PILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSAR---AALRNSDLFSIILQLSSDLAIVKINAEK 76 (392) Q Consensus 1 m~M-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~a~~~~~v~~~i~~ia~~ia~~p~~~~~ 76 (392) +.. .|.+.+..+...- .....++ .+... . ..+ +..+..+ ....+....-+|+.++..+---.+.+-+ T Consensus 16 ~~~~~l~~~~~~~~~r~--~~~~~Yy-~G~~~-i-~~~----~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~~~ 86 (485) T protein:vir:10 16 IARDEMVSAFEDSTQNL--KTNTSYY-EAERR-P-EAI----GVTVPIQMQSLLAHVGYPRLYVDSIAERQAVEGFRFGD 86 (485) T ss_pred HHHHHHHHHHHHHHHHH--HHHHHHH-hcCCc-c-hhc----CCCCChhhhhhhhhcCcHHHHHHHHHhhhcccceecCC Confidence 111 1122221111000 0000000 00000 0 000 0000000 0001112234555555444222332211 Q ss_pred cc-cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCc-------eEEEEEeccccceeeecCccceEEE--E Q lcl|Aclame:pro 77 KK-NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGA-------DMKWEYLRPSQVNTYYFEYENGMYY--N 146 (392) Q Consensus 77 ~~-~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~-------~~~l~~l~~~~v~~~~~~~~~~~~~--~ 146 (392) .+ ....+.+-...-....+...+..+.+.+|.||+++.++..+. ...+.+++|..+.+..+...+.+.. . T Consensus 87 ~~~~~~~~~~i~~~N~~d~~~~~~~~~a~i~G~ay~~v~~~e~~~~~~~~~~~~~i~~~~p~~~~~~~D~~~~~~~~~~~ 166 (485) T protein:vir:10 87 ADEADEELWQWWQANNLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNTPIIRVEPPTRMYAEIDPRIGRVSKAIR 166 (485) T ss_pred CchhHHHHHHHHHhcCHhHHHHHHHHHHhhcCceEEEEeeCCcccccccCCCeeEEEEEccceeEEEEcCCCCceeEEEE Confidence 11 111111111112334556778889999999999988775432 2246778888888777654432211 1 Q ss_pred EEecC--cceeeeEEE-------------------------eceeEEEecCCCcccccccCCHHH----HHHHHHHHHHH Q lcl|Aclame:pro 147 ITFDD--PKIEPILQA-------------------------PQSDLIHMKLLSIDGGKTGISPLY----SLRRESKIQRA 195 (392) Q Consensus 147 ~~~~~--~~~~~~~~~-------------------------~~~~vih~~~~~~~~~~~G~s~~~----~~~~~i~~~~~ 195 (392) +.... +.......+ ..-.|+|+.++...+..+|.|.+. .+.+.+....+ T Consensus 167 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~i~~~v~~liDa~~~~~s 246 (485) T protein:vir:10 167 VAYDAEGNEIQAATLYTPNDIFGWYRVENEWQEWFNNPHGLGVVPVVPIPNRTRLSDLYGTSEITPELRSMTDAAARILM 246 (485) T ss_pred EEEeeCCCeEEEEEEEeCCeEEEEEEcCCceEEeccccCCCCcccEEEeccccccCCCCCccchhHHHHHHHHHHHHHHH Confidence 11111 000001112 222445555544444456887654 33333333322 Q ss_pred HHHHHHHHHHcCCCcceEEEeC-C-CCCchHHHHHHHHHHHhccccCCceeecc-CCceEeecccChhhHHHHHHHHHHH Q lcl|Aclame:pro 196 SDRLTISSLNSSLNVPGVLTVK-G-GGLLSDKDKASRSRSFMKRSRSGGPVVLD-DLEEFTALEIKSNVAQLLSQTDWTS 272 (392) Q Consensus 196 ~~~~~~~~~~ng~~~~~il~~~-~-~~~~~~~~~~~~~~~~~~~~~~g~~~vl~-~g~~~~~l~~~~~d~~~~e~~~~~~ 272 (392) -......++. .|..++..- . .....+.......+ ...++++.++ ++.+|.++....-+ .+++..+... T Consensus 247 ~~~~~~~~~a---~p~~~i~G~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~d~k~~q~~~~~~~-~~~~~l~~~i 317 (485) T protein:vir:10 247 LMQATAELMG---VPQRLIFGIKPEEIGVDPETGQTLFD-----AYLARILAFEDAEGKIQQFSAAELA-NFTNALDQIA 317 (485) T ss_pred HHHHHHHhhc---chHHHHhcCCcccccccccccchhhh-----hcccceeccCCCCceEEeecccchH-HHHHHHHHHH Confidence 2222223332 343333311 1 00001111111111 1223556655 56788776654322 3788888889 Q ss_pred HHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------------------hhcccchhh Q lcl|Aclame:pro 273 KQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD-------------------HISVNMRPA 333 (392) Q Consensus 273 ~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~-------------------~~~~d~~~~ 333 (392) .+|+.+=++|++.+|+...+.++..+.+.. ...+.--+...++.|...|-. .+++.+..- T Consensus 318 ~~~~~~~~~p~~~fg~~~~n~~Sg~Al~~~-~~~l~~k~~~k~~~f~~~l~~~~~l~~~~~~~~~~~~~~~~i~v~w~~~ 396 (485) T protein:vir:10 318 KQVAAYTGLPPQYLSTAADNPASAEAIRAA-ESRLIKKVERKNSIFGGAWEEAMRLAYRMMKGGDVPPDMLRMETVWRDP 396 (485) T ss_pred HHHhcccCCCHHHhccccCchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcccceeeeEEecCC Confidence 999999999999998755433333333322 122222222222222222110 111222222 Q ss_pred hhcchHHHHHHHHHHHhCC--CcCHHHHHHHHHhCCCCccccccc---------------cC----CCCCCCCCCCCCCC Q lcl|Aclame:pro 334 IDPLGDNYLSTISTATRWG--ALAENQATFVLQEAGYIPKDLPAP---------------EN----TNKKTTGQSNEPVP 392 (392) Q Consensus 334 ~~~~~~~~~~~~~~~~~~g--~~T~nE~R~~l~~~g~~~~e~~~~---------------e~----~~~~~~gd~~~p~p 392 (392) ...+..+.+..+.+++++| +++..-++++| |+.++++.++ +. .+..+++++.++.| T Consensus 397 ~~~~~~~~ada~~kl~~ag~~~~s~et~~~~l---g~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (485) T protein:vir:10 397 STPTYAAKADAASKLYNGGTGVIPRERARKDM---GYSIAEREEMRRWDEEEAAMGLGLIGTMVDPNPTVPGSPSPAPAP 473 (485) T ss_pred CCCCHHHHHHHHHHHHhccccCCCHHHHHHhC---CCCHhHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCccccc Confidence 2345566677788888766 78888777765 6665432111 00 11112222222222 No 150 >protein:vir:9568 Length: 410 # NCBI annotation: gp34 # Family: family:all:524 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862873;genbank:gi:32469465;genbank:GeneID:1461310 Probab=98.62 E-value=1.8e-07 Score=57.50 Aligned_cols=346 Identities=12% Similarity=0.033 Sum_probs=153.2 Q ss_pred hHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhh----hcchHHHHHHHHHHHhhhhCceeeecccccc Q lcl|Aclame:pro 6 LNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAA----LRNSDLFSIILQLSSDLAIVKINAEKKKNQG 81 (392) Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a----~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~ 81 (392) ++....+...... -+....+. ..-+..+..+.. +......-+|+.+|+.+- +.=++..... T Consensus 1 l~~~~~r~~~~~~-yY~g~~~~-----------~~~~~~~p~~~~~~~~~v~nw~~~~Vds~a~rl~---~~Gf~~~d~~ 65 (410) T protein:vir:95 1 MNLYQSRVNLRYK-HYAMQHYE-----------APTGITIPAHIRAKYQAVLGWAAKGVDSLADRLI---FRAFANDDFN 65 (410) T ss_pred CCcchhhHHHHHH-HhcCCCCc-----------cccchhccHHHHhHHHhhcchhHHHHHHhHhhhc---cccccCCCch Confidence 2222221111100 00000000 000000101000 001112234444444322 2222222111 Q ss_pred ccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEe--cCccee--ee Q lcl|Aclame:pro 82 IIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITF--DDPKIE--PI 157 (392) Q Consensus 82 ~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~--~~~~~~--~~ 157 (392) +.+-...-........+..+.+.+|.+|+.+..+.+|.| .+.+++|..+...++...+.+...+.+ ....+. .. T Consensus 66 -l~~i~~~N~ld~~~~~~~~~al~~G~sf~~v~~~~d~~~-~i~~~sP~~~~~i~Dp~~~~~~~al~~~~~~~~~~~~~~ 143 (410) T protein:vir:95 66 -VTEIFDRNNPDIFFDSAILSALIGSCSFVYISKGEDDEV-RLQVIESSNATGVIDPITGLLVEGYAVLARDDYNRPTLE 143 (410) T ss_pred -HHHHHhhcChHHHHHHHHHHHHHhCceeEEEecCCCCce-EEEEEcccceEEEEeCCCCceEEEEEEEEecCCCeEEEE Confidence 111112223334455678888999999999998888886 477899999998887765554432221 111111 11 Q ss_pred EEEecee---------------------EEEecCCCcccccccCCH----HHHHHHHHHHHHHHHHHHHHHHHcCCCcce Q lcl|Aclame:pro 158 LQAPQSD---------------------LIHMKLLSIDGGKTGISP----LYSLRRESKIQRASDRLTISSLNSSLNVPG 212 (392) Q Consensus 158 ~~~~~~~---------------------vih~~~~~~~~~~~G~s~----~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~ 212 (392) ..+.++. |+++.+....+..+|.|- +..+.+.+.....-......|+. .|.- T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~l~~~~G~s~I~~~v~~l~da~~r~~~~~~~~~e~~a---~pqr 220 (410) T protein:vir:95 144 AYFEPNATHFIPKDGEPYSVTNETGIPLLVPVIHRPDAVRPFGRSRITRAGMYYQKYAKRTLERADITAEFYS---WPQK 220 (410) T ss_pred EEEeCCcEEEEeeCCccccccCCCCCcceEEecccccCCccCCccccchhHHHHHHHHHHHHHHHHHHHHHhc---chhh Confidence 2222333 344444333344567774 33444444444433344444553 3433 Q ss_pred -EEEeCCCCCchHHHHHHHHHHHhccccCCceeeccC-----CceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHc Q lcl|Aclame:pro 213 -VLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDD-----LEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI 286 (392) Q Consensus 213 -il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~-----g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l 286 (392) ++-.+.+....+ .+.. ..++++.++. +.++.++....-+ .|++..+.....||.+=++|++.+ T Consensus 221 ~i~G~d~d~~~~~----~~~~------~~~~i~~~~~~~~~~~~~v~q~~~~~l~-~~~~~l~~l~~~~a~~s~lP~~~l 289 (410) T protein:vir:95 221 YILGLDPDAEPME----KWKA------TVSSLLTISSSDKGVKPSVGQFTTASMS-PFTEQLRTAAAGFAGEMGLTLDDL 289 (410) T ss_pred eeeccCCCCCcCc----hhhh------hhhhheeccCCCCCCcceEEecCCCChH-HHHHHHHHHHHHHhhhcCCCHHHh Confidence 332322211111 1111 1234455542 3566666543322 489999999999999999999999 Q ss_pred CCcccccchHHHHHHHHH---HHHHHHHHHHHHHHHHH----h--hh----------hhcccchhhhhc---chHHHHHH Q lcl|Aclame:pro 287 GGQGDQQSSIQQISGMYA---SALNRYLRPAISELEYK----L--SD----------HISVNMRPAIDP---LGDNYLST 344 (392) Q Consensus 287 g~~~~~~~~~~~~~~~~~---~~l~p~l~~i~~~l~~~----l--~~----------~~~~d~~~~~~~---~~~~~~~~ 344 (392) |+.+++.++.++.+.-.. ....-.-+.+.+.+.+. + .. .+++......++ +....+.. T Consensus 290 g~~~~NpsSa~Al~a~~~~L~~ka~~k~~~fg~~l~~~~rla~~i~~~~~~~~~~~~~~~v~W~p~~d~~~~s~a~~aDa 369 (410) T protein:vir:95 290 GFVSDNPSSVEAIKASHENLRLAGRKAQRSLGAGLLNVAYVAACLRDEFRYTRSQFVRTAVKWEPLFEADANTMTMIGDG 369 (410) T ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccceeeEEeeecCCcchhhHHHHHHH Confidence 986654344433332211 11111122222222221 1 00 011112211222 23345556 Q ss_pred HHHHHhC--CCcCHHHHHHHHHhCCCCccccccc-cCCCCCCCCC Q lcl|Aclame:pro 345 ISTATRW--GALAENQATFVLQEAGYIPKDLPAP-ENTNKKTTGQ 386 (392) Q Consensus 345 ~~~~~~~--g~~T~nE~R~~l~~~g~~~~e~~~~-e~~~~~~~gd 386 (392) +.++.++ |+....-++++| |+.+.++.+. .... ..-|+ T Consensus 370 ~~Kl~~a~~g~~~~~~~~~~l---g~~~~~~~~~~~~e~-~~~g~ 410 (410) T protein:vir:95 370 VVKLNQALPGYINAETIRDLT---GIAGDMSAKPVVSEG-GSNGE 410 (410) T ss_pred HHHHHHhccCCccHHHHHHhc---CCChHHHHHHHHHHH-HhCCC Confidence 6677776 777777777776 8876654332 1111 11122 No 151 >protein:vir:2427 Length: 485 # NCBI annotation: gp14 # Family: family:all:524 # MgeID: mge:52 # MgeName: D29 # Cross-refs: genbank:acc:NP_046829;genbank:gi:9630397;genbank:GeneID:1261620 Probab=98.60 E-value=2.1e-07 Score=57.20 Aligned_cols=370 Identities=11% Similarity=0.034 Sum_probs=152.3 Q ss_pred Ccch-hhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchh---hhhcchHHHHHHHHHHHhhhhCceeeec Q lcl|Aclame:pro 1 MILP-ILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSAR---AALRNSDLFSIILQLSSDLAIVKINAEK 76 (392) Q Consensus 1 m~Mg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~a~~~~~v~~~i~~ia~~ia~~p~~~~~ 76 (392) +.+- |.+....+...-. .... +..+... ... .+..+..+ ....+....-+|+..+..+---++.+-+ T Consensus 16 ~~~~~L~~~~~~~~~r~~--~~~~-YY~G~~~--i~~----~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g~~~~~ 86 (485) T protein:vir:24 16 IARDEMVSAFEDQNQNLR--SNTS-YYEAERR--PEA----IGVTVPVQMQSLLAHVGYPRLYVDSIAERQAVEGFRLGD 86 (485) T ss_pred HHHHHHHHHHHHHHHHHH--HHHH-HHhccCc--hhh----cCcccchhhhhhhhccchHHHHHHHHhhhhccCceecCC Confidence 1111 1111111110000 0000 0000000 000 00001000 0001112233444444444333444332 Q ss_pred ccc-cc-c--cccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCce-------EEEEEeccccceeeecCccceEEE Q lcl|Aclame:pro 77 KKN-QG-I--IDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGAD-------MKWEYLRPSQVNTYYFEYENGMYY 145 (392) Q Consensus 77 ~~~-~~-~--~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~-------~~l~~l~~~~v~~~~~~~~~~~~~ 145 (392) .+. .. + +.+=| ........+..+.+.+|.||+++.++.++.+ ..+.+++|..+.+.++...+.+.. T Consensus 87 ~~~~~~~l~~i~~~N---~~d~~~~~~~~~a~i~G~ay~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~~i~D~~~~~~~~ 163 (485) T protein:vir:24 87 ADEADEELWQWWQAN---NLDIEAPLGYTDAYVHGRSYITISRPDPQIDLGWDPNVPLIRVEPPTRMYAEIDPRIGRPAK 163 (485) T ss_pred CchhHHHHHHHHHhc---ChhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCcceEEEeccceeEEEeeCCcCceeE Confidence 211 11 1 11112 2345567889999999999999887765432 246778888887776544322111 Q ss_pred --EEEec--Ccce-------------------------eeeEEEeceeEEEecCCCcccccccCCHHHH-HHHHHHHHHH Q lcl|Aclame:pro 146 --NITFD--DPKI-------------------------EPILQAPQSDLIHMKLLSIDGGKTGISPLYS-LRRESKIQRA 195 (392) Q Consensus 146 --~~~~~--~~~~-------------------------~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~-~~~~i~~~~~ 195 (392) .+... +... .....+..-.|+|++++...+..+|.|.+.. +...++.... T Consensus 164 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~~G~s~i~~~v~~liDa~~~ 243 (485) T protein:vir:24 164 AIRVAYDAEGNEIQAATLYTPNETFGWFRAEGEWVEWFSDPHGLGAVPVVPLPNRTRLSDLYGTSEITPELRSMTDAAAR 243 (485) T ss_pred EEEEEEeecCCeEEEEEEEcCCcEEEEEecCCceEeecccccCCCcccEEEeccCcccCCcCCcccchhhHHHHHHHHHH Confidence 00000 0000 0112233334466655544455578886653 3334444333 Q ss_pred HHHHHHHHHHcCCCcceEEEeCC-C-CCchHHHHHHHHHHHhccccCCceeecc-CCceEeecccChhhHHHHHHHHHHH Q lcl|Aclame:pro 196 SDRLTISSLNSSLNVPGVLTVKG-G-GLLSDKDKASRSRSFMKRSRSGGPVVLD-DLEEFTALEIKSNVAQLLSQTDWTS 272 (392) Q Consensus 196 ~~~~~~~~~~ng~~~~~il~~~~-~-~~~~~~~~~~~~~~~~~~~~~g~~~vl~-~g~~~~~l~~~~~d~~~~e~~~~~~ 272 (392) +..-......-.+.|..++..-. . ....+.......+ ...+.+..++ ++.++.++....-+ .+++..+... T Consensus 244 ~~s~~~~~~~~~a~p~~~i~G~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~q~~~~~~e-~~~~~l~~~i 317 (485) T protein:vir:24 244 ILMLMQATAELMGVPQRLIFGIKPEEIGVDPETGQTLFD-----AYLARILAFEDAEGKIQQFSAAELA-NFTNALDQIA 317 (485) T ss_pred HHHHHHHHHHhhcchhhhhccCCccccccccccccchhh-----hcccceeccCCCCceEEeecccchH-HHHHHHHHHH Confidence 32222223333334544433211 0 0001111111111 1233455554 56787776654432 3778888888 Q ss_pred HHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------------------hhcccchhh Q lcl|Aclame:pro 273 KQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD-------------------HISVNMRPA 333 (392) Q Consensus 273 ~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~-------------------~~~~d~~~~ 333 (392) .+++..=++|++.+|+...+.++..+.+. ....+.-.+...+..|...|-. .+++.+..- T Consensus 318 ~~~s~~~~~p~~~fg~~~~n~~Sg~Al~~-~~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~~~~~~~~d~~~i~v~f~~~ 396 (485) T protein:vir:24 318 KQVAAYTGLPPQYLSTAADNPASAEAIRA-AESRLIKKVERKNAIFGGAWEEAMRLAYRLMKGGDVPPDMLRMETVWRDP 396 (485) T ss_pred HHHhcccCCCHHHhccccCcchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeEEecCC Confidence 88999999999999875543333334332 2222223333333333322211 111111112 Q ss_pred hhcchHHHHHHHHHHHhCC--CcCHHHHHHHHHhCCCCccccccc---------------cCC---CCC-----CCCCCC Q lcl|Aclame:pro 334 IDPLGDNYLSTISTATRWG--ALAENQATFVLQEAGYIPKDLPAP---------------ENT---NKK-----TTGQSN 388 (392) Q Consensus 334 ~~~~~~~~~~~~~~~~~~g--~~T~nE~R~~l~~~g~~~~e~~~~---------------e~~---~~~-----~~gd~~ 388 (392) ...+..+.+..+.+++.+| +++..-+++++ |+.++++.++ +.+ .+. .++.++ T Consensus 397 ~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~l---~~~~d~~~e~~~~~ee~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 473 (485) T protein:vir:24 397 STPTYAAKADAATKLYGNGQGVIPRERARKDM---GYSIAEREEMRRWDEEEAAMGLGLLGTMVDADPTVPGSPNPTPAP 473 (485) T ss_pred CCCCHHHHHHHHHHHHhcccccCCHHHHHhhC---CCCHhHHHHHHHHHHHHhhhhhhHHHhhcccCCCCCCCCCCCCCC Confidence 2235555666777777755 66666555544 5544321110 000 010 111111 Q ss_pred CCCC Q lcl|Aclame:pro 389 EPVP 392 (392) Q Consensus 389 ~p~p 392 (392) .+.| T Consensus 474 ~~~~ 477 (485) T protein:vir:24 474 KPQP 477 (485) T ss_pred CCcc Confidence 2222 No 152 >protein:vir:106491 Length: 646 # NCBI annotation: Pas4 # Family: family:all:2798 # MgeID: mge:1680 # MgeName: phiAsp2 # Cross-refs: genbank:acc:YP_024790;genbank:gi:48697405;genbank:GeneID:2846148 Probab=98.57 E-value=2.4e-08 Score=62.36 Aligned_cols=379 Identities=12% Similarity=0.086 Sum_probs=193.4 Q ss_pred chhhHhhcccccccccc-------cccc-cccccchhhhhh-hhcCCCCcccchhhhh-cchHHHHHHHHHHHhhhhCce Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVG-------SVQS-YFPDGNDAQIME-SLLGDNNEWVSARAAL-RNSDLFSIILQLSSDLAIVKI 72 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~-~~~~~~~~~v~~~~a~-~~~~v~~~i~~ia~~ia~~p~ 72 (392) |.+++-....-.+.-.+ +..+ ... .....++. +.++........-.++ ..|.+...+..|+++++++.+ T Consensus 1 ~~~~rPk~~p~~p~~~~~arrr~LtaAsa~l~-~~~~~~~kt~~~~~~~WQ~eAW~~~d~vpELry~vgW~~~a~SR~rL 79 (646) T protein:vir:10 1 MALLKPKSAPPEPFGAEVARRIALAGATAQVD-LGASSSWKTWKFGNKDWQTEGWRLYDIIPEHHFLAGRIGDSVAQARL 79 (646) T ss_pred CcccCCCCCCCCcccccccchhhhhhcccccc-CCCcceeecCCCcchhhhHHHHHHHhhhhhHhhHhhhhhhhhceeee Confidence 66654221111100000 0000 000 00001111 1111111111111111 236677788889999999998 Q ss_pred eeeccccccc-------------cccCC-ccCCHHHHHHHHHHHHHHhCCeeEEE----eeccCCceEEEEEecccccee Q lcl|Aclame:pro 73 NAEKKKNQGI-------------IDNPS-TNANKHGFWQSMFAQLLLGGEAFAYR----WRNANGADMKWEYLRPSQVNT 134 (392) Q Consensus 73 ~~~~~~~~~~-------------~~~PN-~~~s~~~f~~~~~~~l~l~Gn~~~~i----~r~~~G~~~~l~~l~~~~v~~ 134 (392) ..-+-+..+. ...+= ...-..++++.+..++..-|++|+.. ....++ -...+++....|.. T Consensus 80 ~aseiddtG~~tg~v~~~~v~~iv~~~~Gg~~gQ~qlLkr~~~~ltV~GE~wiv~~~~~~~~~~~-~~~W~vvt~~Ev~~ 158 (646) T protein:vir:10 80 YVTEVDDTGEETGEVQDERIKRLAAVPLGTGSQRDDNLRLAGLDLAVGGECWIVGEGAATSPEAA-EGSWFVVTGSAISR 158 (646) T ss_pred eeeeecCCCCCcCccchHHHHHHhhhhccchhhHHHHHHHHHhheecccceEEeeccccCCCCCC-ccceeeecHHHhcc Confidence 7765432211 11222 22345688999999999999999974 122222 22344666666633 Q ss_pred eecCccceEEEEEEecCcceeeeEEEeceeEEE-ecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE Q lcl|Aclame:pro 135 YYFEYENGMYYNITFDDPKIEPILQAPQSDLIH-MKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGV 213 (392) Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih-~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~i 213 (392) . ++.+-.. ..+...++..+..+..+++. +=.+.+.....--||+.++...+.......+...+..+....-.|+ T Consensus 159 t----g~~~~i~-~p~~~~g~~~v~~~~~d~lvRiW~P~Prr~~epDSpvra~l~~l~Ei~~lt~~I~aaakSRL~GnGv 233 (646) T protein:vir:10 159 T----GDEIAVR-RPQQRGGSKLVLVDGQDILIRCWRPHPNDTDQADSFTRSAIVPLREIELLTKREFAELDSRLTGAGI 233 (646) T ss_pred C----CCeeeee-cCccCCCCCcceecCCceEEEEecCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHHHHHhcCce Confidence 1 2211111 11111233444555555533 2233444455678999999999999999999999988888888899 Q ss_pred EEeCCCCCch---------HHHHHHHHHHH----hccccCC--ceeeccC-Cc------eEeecccCh-hhHHHHHHHHH Q lcl|Aclame:pro 214 LTVKGGGLLS---------DKDKASRSRSF----MKRSRSG--GPVVLDD-LE------EFTALEIKS-NVAQLLSQTDW 270 (392) Q Consensus 214 l~~~~~~~~~---------~~~~~~~~~~~----~~~~~~g--~~~vl~~-g~------~~~~l~~~~-~d~~~~e~~~~ 270 (392) +.+++..+-. +.....+.+.. ...+... -++++.. |. +++.++... -+.--+.+|+. T Consensus 234 LfvP~e~s~p~~~~~~a~~~~l~~~l~qaa~tAi~De~S~aA~vPiia~~P~E~i~~~~~ik~l~f~~eite~aiktR~d 313 (646) T protein:vir:10 234 MFLPEGVDFPRGEEDPAGLAGFMAYLQRAAAASMADQSRASAMVPIMATIPNEMMEHLDKIKPLTFWSELSAEITPMKDK 313 (646) T ss_pred eeeccccccCCCCCCCcchhHHHHHHHHHHHhhhcCCCCccceeeeEEeeChHHHhhhhcceeeccCchhhHHHhhhHHH Confidence 9887643221 22332222222 2222222 2334332 11 333333332 22335789999 Q ss_pred HHHHHHHHhcccHHHcCCcccccchHH-HH-HHHHHHHHHHHHHHHHHHHHHHhhhh----hcc-cchh---hhhcchH- Q lcl|Aclame:pro 271 TSKQYAKVYGLPDSYIGGQGDQQSSIQ-QI-SGMYASALNRYLRPAISELEYKLSDH----ISV-NMRP---AIDPLGD- 339 (392) Q Consensus 271 ~~~~Ia~~fgVP~~~lg~~~~~~~~~~-~~-~~~~~~~l~p~l~~i~~~l~~~l~~~----~~~-d~~~---~~~~~~~- 339 (392) .+..+|...-|||+.|=+.++.+-+.. ++ ..-++ .|+|.+..|+++|+..+++- .++ |-+. +++.+.. T Consensus 314 aI~RlA~glDIppE~LLGlgd~NHWtAWqI~de~vr-HI~P~l~~ic~AlT~~~Lrp~Le~eGi~dp~kyvvW~DaS~Lt 392 (646) T protein:vir:10 314 AIARLASSAEIPGEVLTGIGDANHWTAWLISDEGIR-WIRGYLGLIADALTRGFLRRALESMGVTNPERYAFAFDTSTLA 392 (646) T ss_pred HHHHHHhccCCchhheeeccccceeeeeeeccccch-hhhhHHHHHHHHHHhhHHHHHHHHcCCCChhHeEEeecCcccc Confidence 999999999999996644445442221 11 12234 69999999999999887642 333 2221 1221111 Q ss_pred ---HHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccc-----------cC------CCCC----------------- Q lcl|Aclame:pro 340 ---NYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAP-----------EN------TNKK----------------- 382 (392) Q Consensus 340 ---~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~-----------e~------~~~~----------------- 382 (392) .+...+..++..|.+|-...|+.+ |+.-++.+.. .. +.|. T Consensus 393 ~~pd~~deA~qa~drGAIt~eAlrk~~---Gf~~dd~pt~~E~~~~~~~~~v~~~P~Lil~P~~qa~~~~P~~~~~~lpp 469 (646) T protein:vir:10 393 SKPNRLDEAIQLHERNLIKDEEVVKAG---AFSVDQMPTVQERAVQILLGLVKTQPDLILDPAIQAALGLPAVQSVGLPP 469 (646) T ss_pred cCCCCcHHHHHHHHcCCccHHHHHHHh---cccccccCChHHHHHHHHHHHhcCCccccccchhhccccCCCcCccccCC Confidence 123456678889999999999887 4332221111 00 0111 Q ss_pred ---CCCCCCCCCC Q lcl|Aclame:pro 383 ---TTGQSNEPVP 392 (392) Q Consensus 383 ---~~gd~~~p~p 392 (392) ..+|.++-.| T Consensus 470 ~~~~~~dg~~~~~ 482 (646) T protein:vir:10 470 TAAQRTDGDLDDD 482 (646) T ss_pred cccccccCCCCCh Confidence 1111111111 No 153 >protein:vir:94742 Length: 409 # NCBI annotation: putative portal protein # Family: family:all:524 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996701;genbank:gi:45597416;genbank:GeneID:2767966 Probab=98.52 E-value=3.8e-07 Score=55.77 Aligned_cols=342 Identities=11% Similarity=-0.010 Sum_probs=154.0 Q ss_pred CcchhhHhhcccccccc--cccccccccccchhhhhhhhcCCCCcccchhhh----hcchHHHHHHHHHHHhhhhCceee Q lcl|Aclame:pro 1 MILPILNFINQTNDPPE--VGSVQSYFPDGNDAQIMESLLGDNNEWVSARAA----LRNSDLFSIILQLSSDLAIVKINA 74 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a----~~~~~v~~~i~~ia~~ia~~p~~~ 74 (392) |-..+++.+.+.-.... ...... +..+.. .+ ...+..+..+.. +......-+|+.+|..+. +.= T Consensus 1 ~~~~~i~~L~~~~~~~~~r~~~~~~-yY~g~~-----~~-~~~~~~~p~~~~~~~~~v~nw~~~iVds~a~rl~---~~G 70 (409) T protein:vir:94 1 MTEKGIGYLRFKLSVHKRRAEMRYD-QYAMKY-----VD-RFKGITIPQALSQQYRSILGWCAKGVDSLADRLV---FRE 70 (409) T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHH-HhcccC-----ch-hhcChhhhHHHHHHHhhhcchhHHHHHHhHhhcc---cCc Confidence 66666655543321111 000000 000100 00 000111111100 011122334444444322 221 Q ss_pred eccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEe--cCc Q lcl|Aclame:pro 75 EKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITF--DDP 152 (392) Q Consensus 75 ~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~--~~~ 152 (392) ++.+... +.+-...-........+..+.+.+|.+|+.+..+.+|+| .+.+++|..+...++...+.+...+.+ .+. T Consensus 71 f~~~d~~-l~~i~~~N~ld~~~~~~~~~aliyG~sf~~v~~~~dg~~-~i~~~sp~~~~~i~D~~~~~~~~a~~~~~~d~ 148 (409) T protein:vir:94 71 FENDDFT-VNEIFEENNPDIFFDSAVLSSLIASCSFTYISKGENDAV-RLQVIEAVNATGIIDPITGLLTEGYAVLERDE 148 (409) T ss_pred ccCCchH-HHHHHHhcChhHHHHHHHHHHHHhcceeEEEecCCCCce-EEEEeccceEEEEEecCCCceeeeEEEEEecC Confidence 2211111 111111112233445677888899999999999999987 577899998888777655543322211 111 Q ss_pred cee--eeEEEece----------------------eEEEecCCCcccccccCCHH----HHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 153 KIE--PILQAPQS----------------------DLIHMKLLSIDGGKTGISPL----YSLRRESKIQRASDRLTISSL 204 (392) Q Consensus 153 ~~~--~~~~~~~~----------------------~vih~~~~~~~~~~~G~s~~----~~~~~~i~~~~~~~~~~~~~~ 204 (392) .+. ....+.++ .|+++.+....+..+|.|.+ ..+.+.+.....-......|+ T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~g~vPvV~f~n~~~~~~~~G~s~I~e~v~~l~da~~r~~~~~~~~~e~~ 228 (409) T protein:vir:94 149 NNNVVLEAHFLPDRTDYYYRDSRNNISIANPTGHPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAKRTLERADVTAEFY 228 (409) T ss_pred CCceEEEEEEecCcEEEEEecCceeEeeeCCCCCcceEEeccccccccccCccccchhHHHHHHHHHHHHHHHHHHHHHh Confidence 110 00111222 23445444333456787754 333444433333333444444 Q ss_pred HcCCCcce-EEEeCCCCCchHHHHHHHHHHHhccccCCceeecc-----CCceEeecccChhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 205 NSSLNVPG-VLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLD-----DLEEFTALEIKSNVAQLLSQTDWTSKQYAKV 278 (392) Q Consensus 205 ~ng~~~~~-il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~-----~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~ 278 (392) .+ |.- ++-++.+....+..... .++++.++ ++.++.++....-+ .|++..+.....+|.+ T Consensus 229 a~---pqr~i~G~d~d~~~~~~~~~~----------~~~i~~~~~d~dg~~~~v~q~~~~~l~-~~~~~l~~~~~~~a~~ 294 (409) T protein:vir:94 229 SF---PQKYVTGLSDDAEPMETWKAT----------VSSMLQFTKDEDGDKPTLGQFTQPSMS-PFTEQLRTAAAGFAGE 294 (409) T ss_pred cC---hhheeEecCCCCcccchhhhh----------HHHhhcCCCCCCCCCceEEecCCCChh-HHHHHHHHHHHHHhhh Confidence 43 433 33333322222211111 11233332 24566666543322 4889999999999999 Q ss_pred hcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHH----HHHHHHH------hhh----------hhcccchhhhhcch Q lcl|Aclame:pro 279 YGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPA----ISELEYK------LSD----------HISVNMRPAIDPLG 338 (392) Q Consensus 279 fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i----~~~l~~~------l~~----------~~~~d~~~~~~~~~ 338 (392) -++|++.+|+.+++.++.++.++-... +.-.++.. .+.+.+. +.. .+++.....++.+. T Consensus 295 t~lP~~~lg~~~~NpsSa~Al~a~~~~-L~~~a~~k~~~fg~~~~~~~rla~~i~~~~~~~~~~~~~~~v~W~p~~~~~~ 373 (409) T protein:vir:94 295 TGLTLDDLGFVSDNPSSVEAIKASHEN-LRLAGRKAQRSLGAGLLNVAYLAACLRDDAPYLREQFRKTKPKWEPLFEADA 373 (409) T ss_pred cCCCHHHhccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccccccceEEeccCCCcch Confidence 999999999866543444444322211 11112222 2222211 100 11111222223333 Q ss_pred H---HHHHHHHHHHhCC--CcCHHHHHHHHHhCCCCccc Q lcl|Aclame:pro 339 D---NYLSTISTATRWG--ALAENQATFVLQEAGYIPKD 372 (392) Q Consensus 339 ~---~~~~~~~~~~~~g--~~T~nE~R~~l~~~g~~~~e 372 (392) . ..+..+.+++++| +....-++++| |+...| T Consensus 374 ~~~a~~aDa~~Kl~~ag~~~~~~~~~~~~l---G~~~~d 409 (409) T protein:vir:94 374 SMLSLIGDGAIKLNQAIPEFINKDTIRDLT---GIEGGE 409 (409) T ss_pred HHHHHHHHHHHHHHHhcccccchhHHHHHc---CCCCCC Confidence 2 3355677888888 56667777665 887666 No 154 >protein:vir:80680 Length: 441 # NCBI annotation: gp3 # Family: family:all:524 # MgeID: mge:1884 # MgeName: PA6 # Cross-refs: genbank:acc:YP_001285579;genbank:gi:148727085;genbank:GeneID:5247051 Probab=98.50 E-value=4.5e-07 Score=55.40 Aligned_cols=363 Identities=12% Similarity=0.018 Sum_probs=154.4 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccch---hhhhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSA---RAALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) +.=.+.+...+....- .....+ ..+... . . ..+..+.. ...+.+....-+|+..++.+- +.-+.. T Consensus 8 ~i~~l~~~~~~~~~r~--~~l~~Y-y~G~~~-i-~----~~~~~~~~~~~~~k~~~n~~~~ivd~~~~~l~---~~g~~~ 75 (441) T protein:vir:80 8 LIEGMYDRIQRLSSWH--CCIEGY-YEGSNR-V-R----DLGVAIPPELQRVQTVVSWPGIAVDALEERLD---WLGWTN 75 (441) T ss_pred HHHHHHHHHHHHHHHH--HHHHHH-HhcCCc-c-h----hcCcccchhhhhhhhhcchHHHHHHHHHhhhc---cccccC Confidence 1111222111111000 000000 000000 0 0 00000000 000111122334444444331 111221 Q ss_pred ccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEE---EEEEecCcce Q lcl|Aclame:pro 78 KNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMY---YNITFDDPKI 154 (392) Q Consensus 78 ~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~---~~~~~~~~~~ 154 (392) ....-+.+-...-+.......+..+.+.+|.||.++.++.+|.+ .+.+++|..+.+.++...+... ..+....... T Consensus 76 ~d~~~l~~i~~~n~~~~~~~~~~~~~~~~G~a~~~v~~d~~g~~-~i~~~~p~~~~~i~d~~~~~~~~~~~~~~~~~~~~ 154 (441) T protein:vir:80 76 GDGYGLDGVYAANRLATASCDVHLDALIFGLSFVAIIPHGDGTV-SVRPQSPKNCTGKFSADGSRLDAGLVVQQTCDPEV 154 (441) T ss_pred CChHHHHHHHHhcCHHHHHHHHHHHHhhcCeeEEEEEeCCCCce-EEEEEccceEEEEEeCCCCceeEEEEEEEEecCce Confidence 11111111111123556667788899999999999999999987 4788999998887765433211 1111110000 Q ss_pred --------------------------eeeEEEeceeEEEecCCCcccccccCCHHHH-HHHHHHHHHHHHHHHHHHHHcC Q lcl|Aclame:pro 155 --------------------------EPILQAPQSDLIHMKLLSIDGGKTGISPLYS-LRRESKIQRASDRLTISSLNSS 207 (392) Q Consensus 155 --------------------------~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~-~~~~i~~~~~~~~~~~~~~~ng 207 (392) .....+..-.|+|+.+....+..+|.|.+.- +...++.......-..+..+-. T Consensus 155 ~~~~vy~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~l~~~v~~liDa~~~~~s~~~~~~~~~ 234 (441) T protein:vir:80 155 VEAELLLPDVIVQVERRGSREWVEVDRIPNVLGAVPLVPIVNRRRTSRIDGRSEITRSIRAYTDEAVRTLLGQSVNRDFY 234 (441) T ss_pred EEEEEEecCeEEEEEEcCCcceeeccccccCCCceeEEEeeccccCCccCCcccchhhHHHHHHHHHHHHHHHHHHHHhh Confidence 0111223334566665544455568886532 3334443333333333333333 Q ss_pred CCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccC-----CceEeecccChhhHHHHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 208 LNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDD-----LEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLP 282 (392) Q Consensus 208 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~-----g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP 282 (392) +.|-.++..-. ..+.... .+. ...++++.+++ +.++..+..... ..+++..+.....|+..-++| T Consensus 235 ~~~~~~i~G~~-~~~~~~~--~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~i~~~~~~~~~p 304 (441) T protein:vir:80 235 AYPQRWVTGVS-ADEFSQP--GWV------LSMASVWAVDKDDDGDTPNVGSFPVNSP-TPYSDQMRLLAQLTAGEAAVP 304 (441) T ss_pred cCceeeeecCC-ccccccc--hhh------hcccccccCCCCCCCCcceeEecCccch-HHHHHHHHHHHHHHhcccCCC Confidence 44544443211 1111111 111 11233444332 245544443322 237788888899999999999 Q ss_pred HHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------------hhcccchhhhhcchHHHH Q lcl|Aclame:pro 283 DSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD--------------------HISVNMRPAIDPLGDNYL 342 (392) Q Consensus 283 ~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~--------------------~~~~d~~~~~~~~~~~~~ 342 (392) ++.+|+.+.+.++..+.+.. ...+.-.+...++.|...|-. .+++.+..-...+..+.+ T Consensus 305 ~~~~g~~~~~~~Sg~Al~~~-~~~l~~k~~~~~~~f~~~l~~~~~l~~~~~~~~~~~~~~~~~i~~~f~~~~~~~~~e~a 383 (441) T protein:vir:80 305 ERYFGFITSNPPSGEALAAE-ESRLVKRAERRQTSFGQGWLSVGFLAAKALDSRVDEADFFGDVGLRWRDASTPTRAATA 383 (441) T ss_pred HHHhccCCCcchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccceeeeEEeCCCCCcCHHHHH Confidence 99998765544344443322 222223333333333322211 112222222234555667 Q ss_pred HHHHHHHhCCCcC--HHHHHHHHHhCCCCccccccccC-----------CCCCCCCCCCCC Q lcl|Aclame:pro 343 STISTATRWGALA--ENQATFVLQEAGYIPKDLPAPEN-----------TNKKTTGQSNEP 390 (392) Q Consensus 343 ~~~~~~~~~g~~T--~nE~R~~l~~~g~~~~e~~~~e~-----------~~~~~~gd~~~p 390 (392) ..+.++.++|+.. ..-+++. .|+.++++.+++. +++...++.++- T Consensus 384 d~~~kl~~~g~~~~s~~~~~~~---l~~~~~e~~~~~~e~~e~~~~~~~~~~~~~~~~~~~ 441 (441) T protein:vir:80 384 DAVTKLVGAGILPADSRTVLEM---LGLDDVQVEAVMRHRAESSDPLAVLAGAISRQTNEV 441 (441) T ss_pred HHHHHHHhcCcccccHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHHhhhhhcccccC Confidence 7778888888754 3334443 3766655443321 111122222222 No 155 >protein:vir:2341 Length: 488 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:51 # MgeName: Bxb1 # Cross-refs: genbank:acc:NP_075278;genbank:gi:12657865;genbank:GeneID:920078 Probab=98.45 E-value=2.9e-07 Score=56.43 Aligned_cols=372 Identities=11% Similarity=0.034 Sum_probs=148.2 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhh---hhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARA---ALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) +.=.+.+.+......- .....+ ..+.. . ... .+..+..+. -+......-+|+.+++.+---.+.+-.. T Consensus 12 ~i~~L~~~~~~~~~r~--~~~~~Y-y~g~~-~-i~~----~~~~~~~~~~~~~~~~n~~~~ivd~~a~~l~~~Gf~~~~~ 82 (488) T protein:vir:23 12 LRDQLLDAFENKQNEL--KSSKAY-YDAER-R-PDA----IGLAVPLDMRKYLAHVGYPRTYVDAIAERQELEGFRIPSA 82 (488) T ss_pred HHHHHHHHHHHHHHHH--HHHHHH-Hhccc-c-hhh----cCcccchhhhhhhhhcchHHHHHHHHHHhhhccceeccCC Confidence 1112222221111000 000000 00000 0 000 000111110 0111222344555554332222222111 Q ss_pred -----------ccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeec--------cCCceEEEEEeccccceeeecC Q lcl|Aclame:pro 78 -----------KNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRN--------ANGADMKWEYLRPSQVNTYYFE 138 (392) Q Consensus 78 -----------~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~--------~~G~~~~l~~l~~~~v~~~~~~ 138 (392) +....+.+-...-........+..+.+.+|.||+++.+. ..|.+ .+.+++|..+.+.++. T Consensus 83 ~~~~~~~~~d~~~~~~l~~i~~~N~~~~~~~~~~~~a~i~G~a~~~v~~~~~~~~~~~~~~~~-~i~~~~p~~~~~~~d~ 161 (488) T protein:vir:23 83 NGEEPESGGENDPASELWDWWQANNLDIEATLGHTDALIYGTAYITISMPDPEVDFDVDPEVP-LIRVEPPTALYAEVDP 161 (488) T ss_pred cccccccccchhHHHHHHHHHHhcChhHHHHHHHHHHhhcCceEEEEecCCcccccCCCCCcc-eEEEeccceeEEEEec Confidence 000011111011123445567888899999999987653 23333 3567788887776654 Q ss_pred ccceEEEEE--Ee--cCcceee-------------------------eEEEeceeEEEecCCCcccccccCCHHHH-HHH Q lcl|Aclame:pro 139 YENGMYYNI--TF--DDPKIEP-------------------------ILQAPQSDLIHMKLLSIDGGKTGISPLYS-LRR 188 (392) Q Consensus 139 ~~~~~~~~~--~~--~~~~~~~-------------------------~~~~~~~~vih~~~~~~~~~~~G~s~~~~-~~~ 188 (392) ..+.+.+.+ .. +++.... ...+..-.|++++++...+..+|.|.+.. +.. T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~~~~G~s~i~~~v~~ 241 (488) T protein:vir:23 162 RTRKVLYAIRAIYGADGNEIVSATLYLPDTTMTWLRAEGEWEAPTSTPHGLEMVPVIPISNRTRLSDLYGTSEISPELRS 241 (488) T ss_pred CCCceEEEEEEEEecCCCcEEEEEEEecCcEEEEEecCCceEeccccccCCCCcceEEeccccccCCcCCccchhhhHHH Confidence 332221111 00 0000000 11122223455555444444567776542 222 Q ss_pred HHHHHHHHHHHHHHHHHcCCCcceEEEe-C-CCCCchHHHHHHHHHHHhccccCCceeeccCC--ceEeecccChhhHHH Q lcl|Aclame:pro 189 ESKIQRASDRLTISSLNSSLNVPGVLTV-K-GGGLLSDKDKASRSRSFMKRSRSGGPVVLDDL--EEFTALEIKSNVAQL 264 (392) Q Consensus 189 ~i~~~~~~~~~~~~~~~ng~~~~~il~~-~-~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g--~~~~~l~~~~~d~~~ 264 (392) .++....+.........-.+.|..++.. . ......+.......+. ..+++..+++| .+|.++...+. ..+ T Consensus 242 l~Da~~~~~s~~~~~~~~~a~p~~~i~G~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~g~~~~~~q~~~~~~-~~~ 315 (488) T protein:vir:23 242 VTDAAAQILMNMQGTANLMAIPQRLIFGAKPEELGINAETGQRMFDA-----YMARILAFEGGEGAHAEQFSAAEL-RNF 315 (488) T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhCCCcccccccccccchhhhh-----hhhhhccCCCCCCceeEecCCCCh-HHH Confidence 2332222222222211212223222221 1 0111111111111111 12345666655 56666654332 237 Q ss_pred HHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------------------h Q lcl|Aclame:pro 265 LSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD-------------------H 325 (392) Q Consensus 265 ~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~-------------------~ 325 (392) ++..+....+|+..-++|++.+|+...+.++..+.+..+ ..+.--+...+..|...|-. . T Consensus 316 ~~~l~~~i~~~~~~~~~p~~~~g~~~~n~~Sg~Al~~~~-~~l~~k~~~~~~~f~~~l~~~~~l~~~~~~~~~~~~~~~~ 394 (488) T protein:vir:23 316 VDALDALDRKAASYSGLPPQYLSSSSDNPASAEAIKAAE-SRLVKKVERKNKIFGGAWEQAMRLAYKMVKGGDIPTEYYR 394 (488) T ss_pred HHHHHHHHHHHhcccCCCHHHhccccCcchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhcc Confidence 888888899999999999999987554433443433222 22222233333333322211 1 Q ss_pred hcccchhhhhcchHHHHHHHHHHHhCC--CcCHHHHHHHHHhCCCCcccccc-------------------------ccC Q lcl|Aclame:pro 326 ISVNMRPAIDPLGDNYLSTISTATRWG--ALAENQATFVLQEAGYIPKDLPA-------------------------PEN 378 (392) Q Consensus 326 ~~~d~~~~~~~~~~~~~~~~~~~~~~g--~~T~nE~R~~l~~~g~~~~e~~~-------------------------~e~ 378 (392) +++.+..-...+..+.+..+.+++++| +++..-++++| |+.+++..+ .+. T Consensus 395 i~v~f~~~~~~s~~~~ada~~kl~~~g~~~~s~et~~~~l---~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (488) T protein:vir:23 395 METVWRDPSTPTYAAKADAAAKLFANGAGLIPRERGWVDM---GYTIVEREQMRQWLEQDQKQGLGLIGSLYGASTPEGK 471 (488) T ss_pred ceEEecCCCCCCHHHHHHHHHHHHhcccccCCHHHHHHhC---CCCchHHHHHHHHHHHHHHHHHHHHHHHhccCCCccc Confidence 111111111234455666777887765 67887777665 554432110 011 Q ss_pred CCCCCCCCCCCCCC Q lcl|Aclame:pro 379 TNKKTTGQSNEPVP 392 (392) Q Consensus 379 ~~~~~~gd~~~p~p 392 (392) .+..++|+...|.| T Consensus 472 ~~~~~~~~~~~~e~ 485 (488) T protein:vir:23 472 PGEAPVGEPPAPEP 485 (488) T ss_pred CCCCCCCCCCCCCC Confidence 12223444444555 No 156 >protein:vir:4223 Length: 486 # NCBI annotation: predicted 53.7Kd protein # Family: family:all:524 # MgeID: mge:89 # MgeName: L5 # Cross-refs: genbank:acc:NP_039678;swissprot:sw:q05220;genbank:gi:9625444;uniprot:Q05220;genbank:GeneID:2942930;interpro:IPR010859 Probab=98.42 E-value=7.3e-07 Score=54.21 Aligned_cols=370 Identities=11% Similarity=0.029 Sum_probs=149.2 Q ss_pred Ccc----hhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchh---hhhcchHHHHHHHHHHHhhhhCcee Q lcl|Aclame:pro 1 MIL----PILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSAR---AALRNSDLFSIILQLSSDLAIVKIN 73 (392) Q Consensus 1 m~M----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~a~~~~~v~~~i~~ia~~ia~~p~~ 73 (392) +.- .+.+.+..+...-. .... +..+... . .. .+..+..+ .........-+|+.+++.+--..+. T Consensus 13 ~~~~~~~~l~~~~~~~~~r~~--~l~~-YY~G~~~-i-~~----~~~~~~~~~~~~~~v~n~~~~iVd~~~~~l~~~g~~ 83 (486) T protein:vir:42 13 DPAVVREEMISAFEDASKDLA--SNTS-YYDAERR-P-EA----IGVTVPREMQQLLAHVGYPRLYVDSVAERQAVEGFR 83 (486) T ss_pred cHHHHHHHHHHHHHHHHHHHH--HHHH-HhcccCc-c-hh----cccccchhHhhhhhccchHHHHHHHHHhhhccccee Confidence 111 12222211110000 0000 0001000 0 00 00000000 0001112334555555544333343 Q ss_pred eecccc-ccc---cccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCce-------EEEEEeccccceeeecCccce Q lcl|Aclame:pro 74 AEKKKN-QGI---IDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGAD-------MKWEYLRPSQVNTYYFEYENG 142 (392) Q Consensus 74 ~~~~~~-~~~---~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~-------~~l~~l~~~~v~~~~~~~~~~ 142 (392) +-..+. +.. +.+-|. .......+..+++.+|.+|+++.++..|.. ..+.+++|..+.+.++...+. T Consensus 84 ~~~~~~~~~~~~~i~~~N~---~d~~~~~~~~~a~~~G~ay~~v~~~e~~~~~~~~~~~~~i~~~~p~~~~~i~d~~~~~ 160 (486) T protein:vir:42 84 LGDADEADEELWQWWQANN---LDIEAPLGYTDAYVHGRSFITISKPDPQLDLGWDQNVPIIRVEPPTRMHAEIDPRINR 160 (486) T ss_pred cCCCchhHHHHHHHHHhcC---hhHHHHHHHHHHhhcCceEEEEecCCcccccccCCCeeEEEEecccceEEEEeCCCCC Confidence 322111 110 112232 233456788889999999999887654422 256778888888776643222 Q ss_pred EEEEE--EecC-----------------------cce----eeeEEEeceeEEEecCCCcccccccCCHHHH-HHHHHHH Q lcl|Aclame:pro 143 MYYNI--TFDD-----------------------PKI----EPILQAPQSDLIHMKLLSIDGGKTGISPLYS-LRRESKI 192 (392) Q Consensus 143 ~~~~~--~~~~-----------------------~~~----~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~-~~~~i~~ 192 (392) +...+ .... +.. .....+..-.|+++.++...+..+|.|.+.. +...++. T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~~~n~~~~~~~~G~s~i~~~v~~liDa 240 (486) T protein:vir:42 161 VSKAIRVAYDKEGNEIQAATLYTPMETIGWFRADGEWAEWFNVPHGLGVVPVVPLPNRTRLSDLYGTSEITPELRSMTDA 240 (486) T ss_pred eEEEEEEEEecCCCeEEEEEEEcCCcEEEEEecCCcEEeecceecCCCCceEEEeccccccCCCCCcccchhhHHHHHHH Confidence 11111 1100 000 0011122234455555444444568876542 2222333 Q ss_pred HHHHHHHHHHHHHcCCCcceEEEe-CC-CCCchHHHHHHHHHHHhccccCCceeecc-CCceEeecccChhhHHHHHHHH Q lcl|Aclame:pro 193 QRASDRLTISSLNSSLNVPGVLTV-KG-GGLLSDKDKASRSRSFMKRSRSGGPVVLD-DLEEFTALEIKSNVAQLLSQTD 269 (392) Q Consensus 193 ~~~~~~~~~~~~~ng~~~~~il~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~vl~-~g~~~~~l~~~~~d~~~~e~~~ 269 (392) ...+........+-.+.|..++.. +. .....+.......+ ...++++.++ ++.+|.++....-+ .+++..+ T Consensus 241 ~~~~~s~~~~~~e~~a~p~~~i~G~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~q~~~~~~e-~~~~~l~ 314 (486) T protein:vir:42 241 AARILMLMQATAELMGVPQRLIFGIKPEEIGVDSETGQTLFD-----AYLARILAFEDAEGKIQQFSAAELA-NFTNALD 314 (486) T ss_pred HHHHHHHHHHHHHhhcchHHHhhcCCccccccccccccchhh-----hhhchhcccCCCCceEEeecccCHH-HHHHHHH Confidence 332222222222222234333331 11 00001111111111 1233455554 46677666544322 3788888 Q ss_pred HHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------------------hhcccc Q lcl|Aclame:pro 270 WTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD-------------------HISVNM 330 (392) Q Consensus 270 ~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~-------------------~~~~d~ 330 (392) .....+|..=++|++.+|+...+.++..+.+.. ...+.-.+...+..|...|-. .+++.+ T Consensus 315 ~~i~~~s~~~~~p~~~fg~~~~n~~Sg~Al~~~-~~~l~~ka~~~~~~f~~~l~~~~~l~~~~~~~~~~~~d~~~i~v~w 393 (486) T protein:vir:42 315 QIAKQVAAYTGLPPQYLSTAADNPASAEAIRAA-ESRLIKKVERKNLMFGGAWEEAMRIAYRIMKGGDVPPDMLRMETVW 393 (486) T ss_pred HHHHHHhcccCCCHHHhccccCchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccceeeeEEe Confidence 888999999999999998754433333333322 222222223333332222210 111112 Q ss_pred hhhhhcchHHHHHHHHHHHhC--CCcCHHHHHHHHHhCCCCccccccc---------------cCCCC--------CCCC Q lcl|Aclame:pro 331 RPAIDPLGDNYLSTISTATRW--GALAENQATFVLQEAGYIPKDLPAP---------------ENTNK--------KTTG 385 (392) Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~--g~~T~nE~R~~l~~~g~~~~e~~~~---------------e~~~~--------~~~g 385 (392) ..-...+..+.+..+.+++++ |+++..-+++++ |+.++...++ +.++. ..++ T Consensus 394 ~~~~~~s~~~~ad~~~kl~~~~~g~~s~et~~~~l---g~~~d~~~e~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (486) T protein:vir:42 394 RDPSTPTYAAKADAATKLYGNGQGVIPRERARIDM---GYSVKEREEMRRWDEEEAAMGLGLLGTMVDADPTVPGSPSPT 470 (486) T ss_pred cCCCCCCHHHHHHHHHHHHhcccCCCCHHHHHhcC---CCChhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC Confidence 222224455667777787775 677766666554 6554322111 00110 0111 Q ss_pred CCCCCCC Q lcl|Aclame:pro 386 QSNEPVP 392 (392) Q Consensus 386 d~~~p~p 392 (392) .++.+.| T Consensus 471 ~~~~~~~ 477 (486) T protein:vir:42 471 APPKPQP 477 (486) T ss_pred CCCCCCc Confidence 1222333 No 157 >protein:vir:99072 Length: 479 # NCBI annotation: gp27 # Family: family:all:524 # MgeID: mge:1671 # MgeName: Wildcat # Cross-refs: genbank:acc:YP_655892;genbank:gi:109521464;genbank:GeneID:4158037 Probab=98.41 E-value=7.6e-07 Score=54.12 Aligned_cols=368 Identities=8% Similarity=-0.024 Sum_probs=152.9 Q ss_pred Cc------c---hhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhh----cchHHHHHHHHHHHhh Q lcl|Aclame:pro 1 MI------L---PILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAAL----RNSDLFSIILQLSSDL 67 (392) Q Consensus 1 m~------M---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~----~~~~v~~~i~~ia~~i 67 (392) |- . -+++.+......- .....+. .+... +......... .....+ .+....-+|+.+++.+ T Consensus 9 l~~~~~~~~~~~~l~~~~~~~~~r~--~~~~~YY-~g~~~-i~~~~~~~~~---~~~~~~~~~~~~n~~~~iVd~~~~~l 81 (479) T protein:vir:99 9 LSSEGLAKYLETKVFPKMNTECERL--DDFEAWT-KNGQE-VPDLATRHKN---KEREVLQQLSRKPWMGLMVNSFAQQL 81 (479) T ss_pred CChhHHHHHHHHHHHHHHHHHhHHH--HHHHHHH-hcCCc-ccccccccCC---hhHHHHHHHhhcCcHHHHHHHHHhhc Confidence 11 0 1111111110000 0000000 00000 0000000000 000001 1112334556555544 Q ss_pred hhCceeeecccccccc---ccCCccCCHHHHHHHHHHHHHHhCCeeEEEee-----ccCCceEEEEEeccccceeeecCc Q lcl|Aclame:pro 68 AIVKINAEKKKNQGII---DNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR-----NANGADMKWEYLRPSQVNTYYFEY 139 (392) Q Consensus 68 a~~p~~~~~~~~~~~~---~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r-----~~~G~~~~l~~l~~~~v~~~~~~~ 139 (392) ---.+.+-+....... ..-|. .......+..+++.+|.+|+++.+ +..|.+ .+..++|..+.+.+++. T Consensus 82 ~~~gf~~~d~~~~~~~~~i~~~N~---~d~~~~~~~~~a~~~G~af~~v~~~~~~~d~~g~~-~i~~~~p~~~~~iydd~ 157 (479) T protein:vir:99 82 IVDGYRKTGTNENAKGWDTWRLNQ---MDKQQFWLNRAVLTFGYAFIKVTSGISPLDGTTVA-RIKCIDPRDAFAIWEDP 157 (479) T ss_pred ccccccCCCchhhHHHHHHHHhcC---hhHHHHHHHHHHhhcCceEEEEecCCCCcCCCCce-EEEEechhheEEEecCC Confidence 2222222222211111 11232 224456688888999999998764 344544 36677888888766543 Q ss_pred cceE--EEEEEecCc-----------------cee------eeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHH Q lcl|Aclame:pro 140 ENGM--YYNITFDDP-----------------KIE------PILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQR 194 (392) Q Consensus 140 ~~~~--~~~~~~~~~-----------------~~~------~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~ 194 (392) .... .+.+..... .+. ....+..-.|+++.++.... ..|.|.+..+...++... T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~g~vPvv~f~n~~~~~-~~g~sd~e~v~~liDa~~ 236 (479) T protein:vir:99 158 YWDEWPKYLLERQPNGQYWWWTEEDYSIFEFKQGKFIYRETVSHDYGHIPFVRYVNVMDLR-GVCYGDVEPLVTVAKAID 236 (479) T ss_pred cccceeeEEEeecCceeEEEEecceEEEEEecCCceeeccccccCCCCcceEEeecCCCcC-cCCcchhHHHHHHHHHHH Confidence 3211 111111100 000 00112333456666544332 358998888777777766 Q ss_pred HHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceee-ccCCceEeecccChhhHHHHHHHHHHHH Q lcl|Aclame:pro 195 ASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVV-LDDLEEFTALEIKSNVAQLLSQTDWTSK 273 (392) Q Consensus 195 ~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v-l~~g~~~~~l~~~~~d~~~~e~~~~~~~ 273 (392) .+..-..+...-.+.|-.++..-.. .+.+........ ...++++. -+++.++.++..... ..+++..+.... T Consensus 237 ~~~s~~~~~~~~~a~p~~~i~G~~~-~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~q~~~~~~-~~~~~~l~~~i~ 309 (479) T protein:vir:99 237 KTGLDILLVQHHQSFQIRWATGLML-PEGANADQEKMR-----FAQESMLISQNEKASFGAIPAAPL-DGLLNAYKESLL 309 (479) T ss_pred HHHHHHHHHHHHhhchhhhhcCCCc-ccccccchhccc-----cccccceeecCCCceEEEecccch-HHHHHHHHHHHH Confidence 6655555555555556544442111 111111100000 01123333 355677776653221 237778888889 Q ss_pred HHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------------------hhcccchhhhh Q lcl|Aclame:pro 274 QYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD------------------HISVNMRPAID 335 (392) Q Consensus 274 ~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~------------------~~~~d~~~~~~ 335 (392) +|+.+-++|++.+|..++ .+..+.+ +....+.-.+...+..|...|-. .+.+.+..... T Consensus 310 ~i~~~t~~p~~~~g~~~n--~Sg~Al~-~~~~~l~~ka~~~~~~f~~al~~~~~l~~~~~~~~~~~~~~~i~~~w~~~~~ 386 (479) T protein:vir:99 310 EFLALAQLPPHIAGQIVN--VAADALA-AGTRQTMQKLFEKQATWKASHNQTMRLVNKIEGRTEEATDLDFTITWQDVTI 386 (479) T ss_pred HHhccCCCCHHHcccccc--hHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeEEecCCCC Confidence 999999999999986432 2222332 22222222233333332222210 01111111112 Q ss_pred cchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccccc-----------------ccC----------CCCCCCCCCC Q lcl|Aclame:pro 336 PLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPA-----------------PEN----------TNKKTTGQSN 388 (392) Q Consensus 336 ~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~-----------------~e~----------~~~~~~gd~~ 388 (392) .+..+.+..+.+++++|+++...+.+++ .|+.+.++.. +.+ .++.+..++. T Consensus 387 ~s~~~~ad~~~kl~~ag~is~et~l~~l--~gv~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (479) T protein:vir:99 387 QSLAQFADAWAKMVESLKIPAEGVWDMI--PNLDQSTVNGWKEIYDREGDFGKYMRKLQNGPDPAEQRGGPNGATNMQQA 464 (479) T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCcccccCCCCCCCCCCCC Confidence 3556677788888888888876665544 2443322110 000 0001111111 Q ss_pred CCCC Q lcl|Aclame:pro 389 EPVP 392 (392) Q Consensus 389 ~p~p 392 (392) .+.| T Consensus 465 ~~~~ 468 (479) T protein:vir:99 465 NNKT 468 (479) T ss_pred CCCC Confidence 1222 No 158 >protein:vir:103219 Length: 201 # NCBI annotation: hypothetical protein # Family: family:all:297 # MgeID: mge:1605 # MgeName: JK06 # Cross-refs: genbank:acc:YP_277473;genbank:gi:71834115;genbank:GeneID:3562330 Probab=98.40 E-value=2.8e-08 Score=62.01 Aligned_cols=172 Identities=15% Similarity=0.119 Sum_probs=91.8 Q ss_pred EEEeCC---CCCchHHHHHHHHHHH-hccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHc-C Q lcl|Aclame:pro 213 VLTVKG---GGLLSDKDKASRSRSF-MKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI-G 287 (392) Q Consensus 213 il~~~~---~~~~~~~~~~~~~~~~-~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l-g 287 (392) |+++++ .....+....++.+.. ....+.+.+.+..++-+|+.++.+... +.+......+.||++-|||...| | T Consensus 1 V~k~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ld~~~e~~e~~~~~lsG--l~d~l~~~~~~iaa~s~iP~t~LfG 78 (201) T protein:vir:10 1 MWKAKGLADLCDDSDGAARLRLAQVDNNSGVGQAIGIDADSEEYNVLNSDIGG--IDTFLSQKFDRIVALSGIHEIILKG 78 (201) T ss_pred CccchHHHHHhcCChHHHHHHHHHHHHhhhhhhhheeecCCcceeeeecCcCC--hHHHHHHHHHHHHhHhcCchhhhcC Confidence 555543 1111222222222222 222233455555666789888887754 45677788899999999999976 4 Q ss_pred Ccccccc-hH-HHHHHHHH-------HHHHHHHHHHHHHHHHHhhhhhcccchhhhhcchHHH-------HHHHHHHHhC Q lcl|Aclame:pro 288 GQGDQQS-SI-QQISGMYA-------SALNRYLRPAISELEYKLSDHISVNMRPAIDPLGDNY-------LSTISTATRW 351 (392) Q Consensus 288 ~~~~~~~-~~-~~~~~~~~-------~~l~p~l~~i~~~l~~~l~~~~~~d~~~~~~~~~~~~-------~~~~~~~~~~ 351 (392) ....+-+ +. ...+.||. ..+.|.++.+.+-+. +.+.+.+.+.++...+.+++ ++.+..++.+ T Consensus 79 ~sp~Glnatge~d~~nyyd~i~~~Qe~~l~p~le~l~~~~~--~~~~~~~~f~pL~~~s~kekAei~~~~a~a~~~~~~~ 156 (201) T protein:vir:10 79 KNVGGVSASQNTALETFYGYVDRKRKAELLPLLEFLLPFIV--TEQEWSVEFNPLSQVSDKDKSEILEKNVNSVAALIAA 156 (201) T ss_pred CCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCCceEeeCCCCCCCHHHHHHHHHHHHHHHHHHHHc Confidence 3322222 22 23444432 334444443333221 12345555556666666554 4567788999 Q ss_pred CCcCHHHHHHHHHhCCC---Cccc-----cccccCCCCCCCCCCC Q lcl|Aclame:pro 352 GALAENQATFVLQEAGY---IPKD-----LPAPENTNKKTTGQSN 388 (392) Q Consensus 352 g~~T~nE~R~~l~~~g~---~~~e-----~~~~e~~~~~~~gd~~ 388 (392) |+++++|+|+.|...|. .+++ +...+..+|...+..+ T Consensus 157 g~i~~~e~r~~L~~~~~~~~~~~~~~~~~~~~~e~~dp~~~~~~~ 201 (201) T protein:vir:10 157 GIIDADEARDTLRAISTEVKIGEGSIQTEVVINESEDPLDVSANN 201 (201) T ss_pred CCCCHHHHHHHHHhcCCcCCCCCCCCCccccccccCCCCCCCCCC Confidence 99999999999976553 2221 1222222222222222 No 159 >protein:vir:106027 Length: 629 # NCBI annotation: gp9 # Family: family:all:2798 # MgeID: mge:1505 # MgeName: Cooper # Cross-refs: genbank:acc:YP_654906;genbank:gi:109392362;genbank:GeneID:4157055 Probab=98.40 E-value=2.8e-07 Score=56.53 Aligned_cols=383 Identities=12% Similarity=0.023 Sum_probs=200.0 Q ss_pred CcchhhHhhcccccccccccc---cccccccchhhhhhhhcCCC---Ccccchhhhh-cchHHHHHHHHHHHhhhhCcee Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSV---QSYFPDGNDAQIMESLLGDN---NEWVSARAAL-RNSDLFSIILQLSSDLAIVKIN 73 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~v~~~~a~-~~~~v~~~i~~ia~~ia~~p~~ 73 (392) |.-.-++..++.+-.+.+.+. +.+..++.. +-....+.+ ......-.++ .++.+.-.+..++++++++.+. T Consensus 1 ma~~~lrv~rrpk~~p~~r~l~aasqp~~P~~~--~~~~~~g~~~~~~WQ~eAW~~~d~VgElryyvgW~~ss~Sr~rL~ 78 (629) T protein:vir:10 1 MAASTLRVSRRPKGSPARRSLTAASQPMEPGRT--PSRQVAGTVVRTSWQNEAWECMDLVGELRYYVGWRASSCSRVELI 78 (629) T ss_pred CCccceeEEecCCCccceeeeccccCCCCcchh--hchhhhhhhhhhhhhHHHHHHHHhhhhHHHHhhhhhhhheeeeEE Confidence 555556666655443332221 111111110 001111100 0000011111 2355666778899999999887 Q ss_pred eecccccc--------------------ccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCC----ceEEE-EEec Q lcl|Aclame:pro 74 AEKKKNQG--------------------IIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANG----ADMKW-EYLR 128 (392) Q Consensus 74 ~~~~~~~~--------------------~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G----~~~~l-~~l~ 128 (392) .-.-+.+. ...---.-+...++++.+..+|..-|+.|+.++....+ .+..- +.+. T Consensus 79 as~idpDtg~ptg~i~ed~p~~~~v~~~v~~iagG~lGqaqLlkr~~~~ltV~GE~~i~il~~~~~~pd~~~r~~W~vVt 158 (629) T protein:vir:10 79 ASELDPDTGKPTGGIRDDDPDGLRFLEIVKTMAGGPLGQAQLQKRAAECLTVPGEHRICLLDQGDKNPDGSVRHNWYVVT 158 (629) T ss_pred EeeecCCCCCCccccccCchhHHHHHHHHHHhcCccchHHHHHHHHHhheeccCceEEEEeecCCCCCCcccccceeeec Confidence 65432111 01112334677889999999999999999998744443 33323 3344 Q ss_pred cccceeeecCccceEEEEEEecCcceeeeEEEeceeE-EEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcC Q lcl|Aclame:pro 129 PSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQSDL-IHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSS 207 (392) Q Consensus 129 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-ih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng 207 (392) ...+. ++.++... ....+ +.+.......++ +.+=.+.+.....--||+.++...+.......+...+..+.. T Consensus 159 ~~Ei~---~kg~g~~~--i~lpd--g~~he~~~~~D~l~RvW~P~Prr~~e~DSpvra~l~~lrEi~r~tk~i~~aakSR 231 (629) T protein:vir:10 159 NDEVK---NKGAGKTD--IELPD--GTIHEYSKGRDVMFRVWNPRPRRAKEPDSPVRACLDSLREIIRTTKKIRNASKSR 231 (629) T ss_pred HHHhc---cccCceeE--EEcCC--CceeeeeCCCeeEEEeeCCCcccccCCcchhHHHHHHHHHHHHhhhHhHHHHHhH Confidence 44443 22222221 22222 112222233333 333334444445678999999999999998888888888877 Q ss_pred CCcceEEEeCCCCCc------------------------hHHHHHHHHHHH----hccccCC--ceeecc----CCceEe Q lcl|Aclame:pro 208 LNVPGVLTVKGGGLL------------------------SDKDKASRSRSF----MKRSRSG--GPVVLD----DLEEFT 253 (392) Q Consensus 208 ~~~~~il~~~~~~~~------------------------~~~~~~~~~~~~----~~~~~~g--~~~vl~----~g~~~~ 253 (392) ..-.|++.++...+- .+.....+.+.- ...+... -++++. ..-+++ T Consensus 232 L~gnGvlflP~e~slp~~~ap~~~~~Pg~~~p~~~g~aa~d~l~~~l~q~a~aAi~De~S~aA~vPiia~vP~E~l~~ik 311 (629) T protein:vir:10 232 LIGNGVVFLPQELSLPRATAPVADNQPGAPVPIVDGVAAADELSNLLFQTAAAAVDDEDSQAALIPLLATVPGEHLQKIF 311 (629) T ss_pred HhhCceeEeccCcccccccCCCCCCCCcccccccCCCcchHHHHHHHHHHHHhhhcCCCCccceeeeEEeechHHhcCee Confidence 777888776542211 122332222222 1222222 233332 123445 Q ss_pred ecccChh-hHHHHHHHHHHHHHHHHHhcccHHHc-CCcccccchHH-H-HHHHHHHHHHHHHHHHHHHHHHHhhh----h Q lcl|Aclame:pro 254 ALEIKSN-VAQLLSQTDWTSKQYAKVYGLPDSYI-GGQGDQQSSIQ-Q-ISGMYASALNRYLRPAISELEYKLSD----H 325 (392) Q Consensus 254 ~l~~~~~-d~~~~e~~~~~~~~Ia~~fgVP~~~l-g~~~~~~~~~~-~-~~~~~~~~l~p~l~~i~~~l~~~l~~----~ 325 (392) .+...+. +.--+.+|+-.+..+|...-|||+.| |..++.+-+.. + ...-++..|+|.+..|+++|+..++. . T Consensus 312 hLkf~~eite~~iktR~daI~RlAmglDispErLLGlGsd~NHWsAWqI~dedvrlHI~P~l~~ic~Ait~~~Lrp~L~~ 391 (629) T protein:vir:10 312 HLKIGNEITEVEIKTRNDAIARLAMGLDVSPERLLGLGSNSNHWSAWQIGDEDVQLHIKPVMEVLCAAIYREVLVATLRA 391 (629) T ss_pred eeeecCchhHHHHhhHHHHHHHHHhccCCChhheeeccCCccceeeEEecccceeeecchHHHHHHHHHHhHHHHHHHHH Confidence 5554332 22247899999999999999999966 54345443321 1 12335678999999999999988764 2 Q ss_pred hcccchh---hhhcchH----HHHHHHHHHHhCCCcCHHHHHHHHHh---CCCCccccc-----------cccCCC---- Q lcl|Aclame:pro 326 ISVNMRP---AIDPLGD----NYLSTISTATRWGALAENQATFVLQE---AGYIPKDLP-----------APENTN---- 380 (392) Q Consensus 326 ~~~d~~~---~~~~~~~----~~~~~~~~~~~~g~~T~nE~R~~l~~---~g~~~~e~~-----------~~e~~~---- 380 (392) .++|-.. +++.+.. .+...+..+...|.+|-...|+.|+. .|+.+.-.+ ....+. T Consensus 392 eGiDp~~Yvvw~DaS~Lt~dPd~~deA~~a~drGaIt~eAlRr~lG~~~dd~y~~~t~~~~q~~A~~~v~~~P~Li~~~a 471 (629) T protein:vir:10 392 EGIDPDRYVLWYDASGLTVDPDKTDEATAAKEQGAITHEAYRRYLGLADEDGYDLETLEGAQAWARDAIVADPSLIKVLA 471 (629) T ss_pred hCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCCccHHHHHHHhccccccCCCcCCcHHHHHHHHHHhcCCCchhhhhh Confidence 3444332 1121111 12345667788999999999998842 222221111 000111 Q ss_pred CC--CC-CCCCCCCC Q lcl|Aclame:pro 381 KK--TT-GQSNEPVP 392 (392) Q Consensus 381 ~~--~~-gd~~~p~p 392 (392) |+ ++ .+-..|.| T Consensus 472 pll~~~l~~i~~P~p 486 (629) T protein:vir:10 472 PLLTDELAEIDWPEP 486 (629) T ss_pred hhcCCccccccccCC Confidence 11 11 34445666 No 160 >protein:vir:79703 Length: 505 # NCBI annotation: minor structural protein gp61 # Family: family:all:898 # MgeID: mge:1873 # MgeName: LL-H # Cross-refs: genbank:acc:YP_001285880;genbank:gi:148750838;genbank:GeneID:5220405 Probab=98.31 E-value=1.5e-06 Score=52.55 Aligned_cols=373 Identities=9% Similarity=0.052 Sum_probs=166.3 Q ss_pred chhhHhhc----ccccc---cc-cccc----cccccccch---hhhhhhhcCCCCcccchh---------hhhcchHHHH Q lcl|Aclame:pro 3 LPILNFIN----QTNDP---PE-VGSV----QSYFPDGND---AQIMESLLGDNNEWVSAR---------AALRNSDLFS 58 (392) Q Consensus 3 Mg~~~~~~----~~~~~---~~-~~~~----~~~~~~~~~---~~~~~~~~~~~~~~v~~~---------~a~~~~~v~~ 58 (392) ||+|.+++ +-... .+ ...+ .-..++... .....++.+... .+... .-.+...... T Consensus 1 m~~~~~ik~~~~~~~~~~~~~~~~~~i~d~~~i~~~~~~~~~i~~~~~~Y~g~~~-~l~~~~~~~~~~~~~~~slnl~~~ 79 (505) T protein:vir:79 1 MAFWDTLKNLFRKGSAAVGMTKSLGQIIDDPRINLPADEVERIARDKRYYMDDFK-QVTHKNSYGDTQKHELQSVNVTKL 79 (505) T ss_pred CchHHHHHHHHHHhhhhhcchhhhhhhhcccCCCCCHHHHHHHHHHHHHhcCCCc-cccccccCCCccccceeecchHHH Confidence 66665443 31110 00 0000 000111000 111223332211 11110 1122233344 Q ss_pred HHHHHHHhhhhCceeee--ccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeee Q lcl|Aclame:pro 59 IILQLSSDLAIVKINAE--KKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYY 136 (392) Q Consensus 59 ~i~~ia~~ia~~p~~~~--~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~ 136 (392) +++.+|+-+-.=|..+. +......+.+=...-....-.+..+.+.+..|.+++.+..+ .|. ..+..++|..+-+.. T Consensus 80 i~~~~A~ll~~e~~~i~~~d~~~~e~l~~i~~~n~f~~~~~~~~e~a~a~G~~~~k~~~D-~~~-~~i~~v~ad~~~P~~ 157 (505) T protein:vir:79 80 ASAKLASLIFNEQCQVTVSDETANDFLDDVFQQNDFYTTFEEKLEEWIALGSGCVRPYVD-SGK-IKLAWATADQVYPLQ 157 (505) T ss_pred HHHHHHhhhcCCCceeecCChHHHHHHHHHHHhccHHHHHHHHHHHHhhcCCeEEEEEEe-CCc-eEEEEEcCCeeEEEE Confidence 55666665543343332 21111122111111112333455666667778887776655 343 335556666655432 Q ss_pred cCccc------------------eEEEE----------EEec--------Ccceeee---------------EE---Eec Q lcl|Aclame:pro 137 FEYEN------------------GMYYN----------ITFD--------DPKIEPI---------------LQ---APQ 162 (392) Q Consensus 137 ~~~~~------------------~~~~~----------~~~~--------~~~~~~~---------------~~---~~~ 162 (392) .+.++ .+|.. +.+. ....|.. .. ++. T Consensus 158 ~d~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~~~l~~~~~~~g~~~ 237 (505) T protein:vir:79 158 ADTNQVNELAIASRTTEVENHRTIYYTLLEFHQWDHGDYVITNELYRSEAAETVGINVPLNSLEQYEGLEPQVKITGLKH 237 (505) T ss_pred EcCCCeEEEEEEEEEEEecCCcceEEEEEEEEEecCceEEEEEEEEecCCCCccCcccchhhcccccccCcceeecCCCc Confidence 11111 11100 0000 0000100 01 111 Q ss_pred eeEEEecCCCcc----cccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE----EEeCCCCCch--HHH---HHH Q lcl|Aclame:pro 163 SDLIHMKLLSID----GGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGV----LTVKGGGLLS--DKD---KAS 229 (392) Q Consensus 163 ~~vih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~i----l~~~~~~~~~--~~~---~~~ 229 (392) -.+.|++.+.++ ....|+|.+..+...++..........+-|+.|-..-.+ ++.......+ +.. ... T Consensus 238 p~f~~~~~~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g~~~i~v~~~~l~~~~~~~~~~~~~~~~~fd~ 317 (505) T protein:vir:79 238 PLFAFYRNKGANNKNFTSPMGMSLIDNSYTVIDAINRTHDQFVDEVKKGQRRLIVPAEWLKTGSSYGGQASETHPPMFDP 317 (505) T ss_pred ceEEEecCCcccccccCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhcccceeechHHhcccCCCCcccccccccCCCc Confidence 234456543222 335799999999999988888877777777765443111 2221111100 000 000 Q ss_pred HHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHH---HHHH Q lcl|Aclame:pro 230 RSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGM---YASA 306 (392) Q Consensus 230 ~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~---~~~~ 306 (392) ....+..... =+++..++.++....+.++.+..+...++|+...|+++..+|...++..+..++..- ...+ T Consensus 318 ~~~~y~~~~~------~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~~~~~~~~~~TAtei~s~~~~l~~t 391 (505) T protein:vir:79 318 DETVYQAMYG------DASEVGFHDATSPIRVADYQATMDFFLREFENQTGLSQGTFTTSPSGIQTATEVVTNNSQTYQT 391 (505) T ss_pred cceeeeeccC------CCCCCceEEecccCCHHHHHHHHHHHHHHHHHHhCCChhhcCCCccccchHHHHHHHHhHHHHH Confidence 0011111110 022456888888888889999999999999999999999998654443333222211 1222 Q ss_pred HHHHHHHHHHHHHHHh---h----------------------hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 307 LNRYLRPAISELEYKL---S----------------------DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATF 361 (392) Q Consensus 307 l~p~l~~i~~~l~~~l---~----------------------~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~ 361 (392) +.-..+.++++|...+ + ..+.++...-+..|.++.......++.+|++++.+++. T Consensus 392 ~~~~~~~~~~al~~li~~i~~~~~~~~~~~~g~~~~~~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~v~~Gi~s~e~~l~ 471 (505) T protein:vir:79 392 RSSYITQVEKTIKALTYAILELASVPSFYADGQARWTGDVDSLDITINFNDGVFVDQESKRAADLQAVQAQVMPKKQFLM 471 (505) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCCCceeEEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHH Confidence 2222333333332211 0 01223333344456677778888899999999988775 Q ss_pred HHHhCCCCccc----cccccCC-----CC--CCCCC Q lcl|Aclame:pro 362 VLQEAGYIPKD----LPAPENT-----NK--KTTGQ 386 (392) Q Consensus 362 ~l~~~g~~~~e----~~~~e~~-----~~--~~~gd 386 (392) .. -|+...+ +.++... |. --||| T Consensus 472 ~~--~~~~eeea~~el~ri~~E~~~~~p~~~~~gg~ 505 (505) T protein:vir:79 472 RN--YGLDEEEADEWLAQIDAENSTAEPEFNQFGGD 505 (505) T ss_pred hc--CCCChHHHHHHHHHHHHhccccCCCchhccCC Confidence 43 4555433 2222111 11 11333 No 161 >protein:vir:9751 Length: 422 # NCBI annotation: putative structural protein # Family: family:all:524 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795513;genbank:gi:28876291;genbank:GeneID:1257832 Probab=98.18 E-value=2.9e-06 Score=50.91 Aligned_cols=354 Identities=12% Similarity=0.058 Sum_probs=147.9 Q ss_pred CcchhhHhhcccc-ccc-ccccccccccccchhhhhhhhcCCCCcccchhh-hh---cchHHHHHHHHHHHhhhhCceee Q lcl|Aclame:pro 1 MILPILNFINQTN-DPP-EVGSVQSYFPDGNDAQIMESLLGDNNEWVSARA-AL---RNSDLFSIILQLSSDLAIVKINA 74 (392) Q Consensus 1 m~Mg~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-a~---~~~~v~~~i~~ia~~ia~~p~~~ 74 (392) |-=..++.+.+.- ... .......+. .+.. .+ ...+..+..+. .+ ......-+|+.+++.+-=--|.. T Consensus 1 m~~~~i~~L~~~~~~~~~r~~~~~~yy-~g~~-----~~-~~~~~~~p~~~~~~~~~v~nw~~~~Vd~~a~rl~~~Gf~~ 73 (422) T protein:vir:97 1 MNYMGMGYLRRKLALFKTGVDKRYRYY-AMDD-----RD-DTRSIVMPNNVREMYRSVLEWTAKGVDSLADRIIFREFTN 73 (422) T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHH-hcCC-----Ch-hhcCccccHHHHHHHHhhcchhHHHHHHHHhccccceeeC Confidence 3222222221111 000 000000000 0000 00 00011111110 00 00111223444443221111211 Q ss_pred eccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeecc-CCceEEEEEeccccceeeecCccceEEEEE---Eec Q lcl|Aclame:pro 75 EKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNA-NGADMKWEYLRPSQVNTYYFEYENGMYYNI---TFD 150 (392) Q Consensus 75 ~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~-~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~---~~~ 150 (392) -+.....+. +-|.. ......+..+.+.+|.+|+.+.++. +|.| .+.+++|..+...++...+.+..-+ ..+ T Consensus 74 ~d~~l~~~w-~~N~l---d~~~~~~~~~al~~G~sf~~v~~~~~~~~p-~i~~~sp~~~~~i~D~~~~~~~~a~~~~~~~ 148 (422) T protein:vir:97 74 DDFNAWEIF-KANNP---DIFFDTAIQSALIASCCFVYIMPGAEDGLP-KMQVIEASKATGILDPTTFLLTEGYAILESD 148 (422) T ss_pred CchhHHHHH-HhcCh---HHHHHHHHHHHHHhcceeEEEeeCCCCCee-EEEEechhhEEEEEeCCCCcceeeEEEEEec Confidence 111111111 12332 2233467788899999999998775 5765 5788999999988776544332211 111 Q ss_pred Cc-ceeeeEEEece---------------------eEEEecCCCcccccccCCHH----HHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 DP-KIEPILQAPQS---------------------DLIHMKLLSIDGGKTGISPL----YSLRRESKIQRASDRLTISSL 204 (392) Q Consensus 151 ~~-~~~~~~~~~~~---------------------~vih~~~~~~~~~~~G~s~~----~~~~~~i~~~~~~~~~~~~~~ 204 (392) .. .......+++. .|+++.+....+..+|.|.+ ..+.+.+.....-......|+ T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~~~G~s~I~e~v~~l~da~~r~~~~~~~~~e~~ 228 (422) T protein:vir:97 149 SNGNPTLEAYFTDKDIWYYPKKGKPYNIKNPTGHPLLVPIIHRPDAVRPFGRSRITKAGMYHQKAAKRTLERAEVTAEFY 228 (422) T ss_pred CCCcEEEEEEEcCceEEEEcCCCccccccCCCCCcceEEecccCCCccccCccccchhHHHHHHHHHHHHHHHHHHHHHh Confidence 11 10011112222 34555544444455788754 233333333332223333343 Q ss_pred HcCCCcce-EEEeCCCCCchHHHHHHHHHHHhccccCCceeecc-----CCceEeecccChhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 205 NSSLNVPG-VLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLD-----DLEEFTALEIKSNVAQLLSQTDWTSKQYAKV 278 (392) Q Consensus 205 ~ng~~~~~-il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~-----~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~ 278 (392) . .|.- ++-.+.+....+. +.. +.++++.++ ++.++.++..+.-+ .|++..+.....||++ T Consensus 229 a---~pqr~i~G~d~d~~~~~~----~~~------~~~~i~~~~~de~~~~~~v~q~~~~~l~-~~~~~l~~~~~~~a~~ 294 (422) T protein:vir:97 229 S---FPQKYVLGMDPDAKPMEK----WRA------TVSTLLEISKDEDGDKPTVGQFTTASMA-PFMEHLKMYASLFAGG 294 (422) T ss_pred c---chhhhhcccCcccccCch----hhh------hhhhhhccCCCCCCCcceeeecCCCChh-HHHHHHHHHHHHHhcc Confidence 3 2332 2222221111111 111 112344443 23566666554422 4899999999999999 Q ss_pred hcccHHHcCCcccccchHHHHHHHH---HHHHHHHHHHHHHHHHHHh------hh----------hhcccchhhhhcchH Q lcl|Aclame:pro 279 YGLPDSYIGGQGDQQSSIQQISGMY---ASALNRYLRPAISELEYKL------SD----------HISVNMRPAIDPLGD 339 (392) Q Consensus 279 fgVP~~~lg~~~~~~~~~~~~~~~~---~~~l~p~l~~i~~~l~~~l------~~----------~~~~d~~~~~~~~~~ 339 (392) =++|++.+|+.+.+.++.++++.-. ...+.-.-+.+.+.+.+.+ .. .+++.....++.+.. T Consensus 295 s~lP~~~lg~~~~NpsSa~Ai~a~~~~L~~ka~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~~~~w~p~~~~~~~ 374 (422) T protein:vir:97 295 SGLTLDDLGFPSDNPSSVESIKAAHENLRAAGRKAQRSFSSGFLNVAYIAVCLRDEFPYLRNQFMDTVIKWEPLFEADAN 374 (422) T ss_pred cCCCHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhccceEEEccCCCCChH Confidence 9999999998665434444433211 1111111222222222211 00 112222222233433 Q ss_pred H---HHHHHHHHHhC--CCcCHHHHHHHHHhCCCCccc--cccccCCCCCCC Q lcl|Aclame:pro 340 N---YLSTISTATRW--GALAENQATFVLQEAGYIPKD--LPAPENTNKKTT 384 (392) Q Consensus 340 ~---~~~~~~~~~~~--g~~T~nE~R~~l~~~g~~~~e--~~~~e~~~~~~~ 384 (392) + .+..+.+++++ |+....-++++| |+...+ .++++... ..| T Consensus 375 s~a~~aDa~~Kl~~a~~~~~~~~~~~~~l---g~~~~~~~~~~~~~~~-~d~ 422 (422) T protein:vir:97 375 MLTLVGDGAIKLNQAIPGFMDADVIRDLT---GVKGADKPIPAITEVT-TDG 422 (422) T ss_pred HHHHHHHHHHHHHhhccccccHHHHHHHc---CCCchhHHHHHHHhhh-ccC Confidence 3 34455567666 677778778776 776432 34444331 112 No 162 >protein:vir:3028 Length: 500 # NCBI annotation: minor capsid protein # Family: family:all:898 # MgeID: mge:61 # MgeName: PhiNIH1.1 # Cross-refs: genbank:acc:NP_438141;genbank:gi:16271804;genbank:GeneID:929241 Probab=98.18 E-value=2.9e-06 Score=50.91 Aligned_cols=381 Identities=9% Similarity=0.018 Sum_probs=165.4 Q ss_pred chhhHhhcccccc---------ccccc--ccccccccc---hhhhhhhhcCCCCc--------ccchhhhhcchHHHHHH Q lcl|Aclame:pro 3 LPILNFINQTNDP---------PEVGS--VQSYFPDGN---DAQIMESLLGDNNE--------WVSARAALRNSDLFSII 60 (392) Q Consensus 3 Mg~~~~~~~~~~~---------~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~--------~v~~~~a~~~~~v~~~i 60 (392) ||+|.+++..-.+ -..-. ..-..++.. ....+.++.+.... ....+.-.+......++ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (500) T protein:vir:30 1 MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAA 80 (500) T ss_pred CchHHHHHHHHHHHHHHhhcchhhhhhccccccCCHHHHHHHHHHHHHhcCCCCCcccccCCCCcccCceeecchHHHHH Confidence 6666544332111 00000 000011100 11112233222110 00111122333334455 Q ss_pred HHHHHhhhhCcee--eeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecC Q lcl|Aclame:pro 61 LQLSSDLAIVKIN--AEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFE 138 (392) Q Consensus 61 ~~ia~~ia~~p~~--~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~ 138 (392) +.+|+-+-.=|.. +-.......+.+=...-....-.+..+...+..|.+++.+..+. |.+ .+..+++..+-+...+ T Consensus 81 ~~~A~lv~~e~~~i~~~d~~~~~~l~~il~~n~f~~~~~~~~e~a~a~G~~~~k~~~d~-~~~-~I~~v~ad~~~P~~~d 158 (500) T protein:vir:30 81 KKIASLVFNEQAEIKVDDDAANEFISETLKNDRFNKNFERYLESCLALGGLAMRPYVDG-DKV-RVAFVQAPVFLPLQSN 158 (500) T ss_pred HHHhhhhcCCcceEecCChHHHHHHHHHHhhccHHHHHHHHHHHHhhcCCEEEEEEEeC-Cce-EEEEEcCCeeEEEEEc Confidence 5666555443332 21111121221111111223334455566666787777666553 333 3566677766553221 Q ss_pred ccc-----------------eEEE-EE---EecCcce----------------eeeEE----------------EeceeE Q lcl|Aclame:pro 139 YEN-----------------GMYY-NI---TFDDPKI----------------EPILQ----------------APQSDL 165 (392) Q Consensus 139 ~~~-----------------~~~~-~~---~~~~~~~----------------~~~~~----------------~~~~~v 165 (392) .++ ..+| .. .+.++.. |..+. ++.--+ T Consensus 159 ~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~l~~~~~~~~~~~p~f 238 (500) T protein:vir:30 159 TQDVSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEAKVTDVTRPIF 238 (500) T ss_pred CCCeEEEEEEEEEeeeecCCceEEEEEEEEEEeCCceeEEEEEEEecccccccCcccccccccCCcCcceEeccCCCccE Confidence 111 1111 00 0000000 00000 000112 Q ss_pred EEecCCCc----ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE----EEeCCCCCchHH-HHHHH--H-HH Q lcl|Aclame:pro 166 IHMKLLSI----DGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGV----LTVKGGGLLSDK-DKASR--S-RS 233 (392) Q Consensus 166 ih~~~~~~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~i----l~~~~~~~~~~~-~~~~~--~-~~ 233 (392) .|++.+.. .+..+|+|.+..+...++..........+-++.|-..-.+ +.........+. ....+ . +. T Consensus 239 ~~~~~~~~N~~~~~sp~G~S~~~~~~~lid~lD~~~s~~~~e~~~g~~~i~v~~~~l~~~~~~~~g~~~~~~~~d~~~~~ 318 (500) T protein:vir:30 239 TYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQRRVAVPESLTALTVRTTDGDVVPRPRFESDQNV 318 (500) T ss_pred EEecCCccccccCCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhCcceeeechHHhcccCCCCCccccCCcccCCCcce Confidence 34443221 2345699999999999998888877777777764432111 221111100000 00000 0 00 Q ss_pred HhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHH---HHHHHHHHHH Q lcl|Aclame:pro 234 FMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQIS---GMYASALNRY 310 (392) Q Consensus 234 ~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~---~~~~~~l~p~ 310 (392) +..... -.+++..++.++....+-++.+..+...++|+...|+++..+|...++..+..++. +-...++.-. T Consensus 319 ~~~~~~-----~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~gls~~~~~~~~~g~~TAtei~s~~~~~~~t~~~~ 393 (500) T protein:vir:30 319 YIRMGG-----RDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMKTATEIVSENSDTYQMRNSI 393 (500) T ss_pred EEEcCC-----CCCcCcceeEeccccChHHHHHHHHHHHHHHHHHhCCCccccccCcCccccHHHHHHHHHHHHHHHHHH Confidence 100000 01234568888888888899999999999999999999999986544432222221 1111122222 Q ss_pred HHHHHHHHHHH------------hh-------hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc Q lcl|Aclame:pro 311 LRPAISELEYK------------LS-------DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK 371 (392) Q Consensus 311 l~~i~~~l~~~------------l~-------~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~ 371 (392) .+.++++|... +. ..+.++...-+..|.++.+..+..++.+|+++.-+++..+ .|+... T Consensus 394 ~~~~~~al~~lv~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~v~aGi~s~~~~i~~~--~g~~ee 471 (500) T protein:vir:30 394 VALVEQSLKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMAIQKV--LNVTEE 471 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHhc--CCCCHH Confidence 22222222221 10 1123344444445667778888899999999999887543 466544 Q ss_pred ccccc-cCCCCCCCCCCCCCCC Q lcl|Aclame:pro 372 DLPAP-ENTNKKTTGQSNEPVP 392 (392) Q Consensus 372 e~~~~-e~~~~~~~gd~~~p~p 392 (392) +..+. +........+.+++.| T Consensus 472 ea~~~l~~i~~E~~~~~~~~~~ 493 (500) T protein:vir:30 472 KAQEIAAEINTGIVDEINQQRT 493 (500) T ss_pred HHHHHHHHHHHhccccCCCCCc Confidence 32211 1110001112222223 No 163 >protein:vir:9815 Length: 500 # NCBI annotation: putative minor capsid protein # Family: family:all:898 # MgeID: mge:176 # MgeName: 315.4 # Cross-refs: genbank:acc:NP_795577;genbank:gi:28876344;genbank:GeneID:1257866 Probab=98.18 E-value=2.9e-06 Score=50.91 Aligned_cols=381 Identities=9% Similarity=0.018 Sum_probs=165.4 Q ss_pred chhhHhhcccccc---------ccccc--ccccccccc---hhhhhhhhcCCCCc--------ccchhhhhcchHHHHHH Q lcl|Aclame:pro 3 LPILNFINQTNDP---------PEVGS--VQSYFPDGN---DAQIMESLLGDNNE--------WVSARAALRNSDLFSII 60 (392) Q Consensus 3 Mg~~~~~~~~~~~---------~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~--------~v~~~~a~~~~~v~~~i 60 (392) ||+|.+++..-.+ -..-. ..-..++.. ....+.++.+.... ....+.-.+......++ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (500) T protein:vir:98 1 MGVIQKIKNLVTRSKYVMTTQSLTNITDHPKIAISKLEYDRITTNLKYYKSDWDSVLYLNTDGETKKRDLNHLPIARTAA 80 (500) T ss_pred CchHHHHHHHHHHHHHHhhcchhhhhhccccccCCHHHHHHHHHHHHHhcCCCCCcccccCCCCcccCceeecchHHHHH Confidence 6666544332111 00000 000011100 11112233222110 00111122333334455 Q ss_pred HHHHHhhhhCcee--eeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecC Q lcl|Aclame:pro 61 LQLSSDLAIVKIN--AEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFE 138 (392) Q Consensus 61 ~~ia~~ia~~p~~--~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~ 138 (392) +.+|+-+-.=|.. +-.......+.+=...-....-.+..+...+..|.+++.+..+. |.+ .+..+++..+-+...+ T Consensus 81 ~~~A~lv~~e~~~i~~~d~~~~~~l~~il~~n~f~~~~~~~~e~a~a~G~~~~k~~~d~-~~~-~I~~v~ad~~~P~~~d 158 (500) T protein:vir:98 81 KKIASLVFNEQAEIKVDDDAANEFISETLKNDRFNKNFERYLESCLALGGLAMRPYVDG-DKV-RVAFVQAPVFLPLQSN 158 (500) T ss_pred HHHhhhhcCCcceEecCChHHHHHHHHHHhhccHHHHHHHHHHHHhhcCCEEEEEEEeC-Cce-EEEEEcCCeeEEEEEc Confidence 5666555443332 21111121221111111223334455566666787777666553 333 3566677766553221 Q ss_pred ccc-----------------eEEE-EE---EecCcce----------------eeeEE----------------EeceeE Q lcl|Aclame:pro 139 YEN-----------------GMYY-NI---TFDDPKI----------------EPILQ----------------APQSDL 165 (392) Q Consensus 139 ~~~-----------------~~~~-~~---~~~~~~~----------------~~~~~----------------~~~~~v 165 (392) .++ ..+| .. .+.++.. |..+. ++.--+ T Consensus 159 ~~~~~~~a~~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~~~l~~~~~~~~~~~p~f 238 (500) T protein:vir:98 159 TQDVSSAAVVIKSVKTINGKEVYYTLIEFHEWQSSDDYVISNELYRSDDKAKVGSRVPLSEVYKDLKDEAKVTDVTRPIF 238 (500) T ss_pred CCCeEEEEEEEEEeeeecCCceEEEEEEEEEEeCCceeEEEEEEEecccccccCcccccccccCCcCcceEeccCCCccE Confidence 111 1111 00 0000000 00000 000112 Q ss_pred EEecCCCc----ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE----EEeCCCCCchHH-HHHHH--H-HH Q lcl|Aclame:pro 166 IHMKLLSI----DGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGV----LTVKGGGLLSDK-DKASR--S-RS 233 (392) Q Consensus 166 ih~~~~~~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~i----l~~~~~~~~~~~-~~~~~--~-~~ 233 (392) .|++.+.. .+..+|+|.+..+...++..........+-++.|-..-.+ +.........+. ....+ . +. T Consensus 239 ~~~~~~~~N~~~~~sp~G~S~~~~~~~lid~lD~~~s~~~~e~~~g~~~i~v~~~~l~~~~~~~~g~~~~~~~~d~~~~~ 318 (500) T protein:vir:98 239 TYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINTTYDEFMWEVKMGQRRVAVPESLTALTVRTTDGDVVPRPRFESDQNV 318 (500) T ss_pred EEecCCccccccCCCccCCchhhhhHHHHHHHHHHHHHHHHHHHhCcceeeechHHhcccCCCCCccccCCcccCCCcce Confidence 34443221 2345699999999999998888877777777764432111 221111100000 00000 0 00 Q ss_pred HhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHH---HHHHHHHHHH Q lcl|Aclame:pro 234 FMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQIS---GMYASALNRY 310 (392) Q Consensus 234 ~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~---~~~~~~l~p~ 310 (392) +..... -.+++..++.++....+-++.+..+...++|+...|+++..+|...++..+..++. +-...++.-. T Consensus 319 ~~~~~~-----~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~gls~~~~~~~~~g~~TAtei~s~~~~~~~t~~~~ 393 (500) T protein:vir:98 319 YIRMGG-----RDLDSSAIQDLTTPIRADDYIKAINEGLSLFEMQIGVSAGLFSFDGKSMKTATEIVSENSDTYQMRNSI 393 (500) T ss_pred EEEcCC-----CCCcCcceeEeccccChHHHHHHHHHHHHHHHHHhCCCccccccCcCccccHHHHHHHHHHHHHHHHHH Confidence 100000 01234568888888888899999999999999999999999986544432222221 1111122222 Q ss_pred HHHHHHHHHHH------------hh-------hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc Q lcl|Aclame:pro 311 LRPAISELEYK------------LS-------DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK 371 (392) Q Consensus 311 l~~i~~~l~~~------------l~-------~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~ 371 (392) .+.++++|... +. ..+.++...-+..|.++.+..+..++.+|+++.-+++..+ .|+... T Consensus 394 ~~~~~~al~~lv~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~v~aGi~s~~~~i~~~--~g~~ee 471 (500) T protein:vir:98 394 VALVEQSLKELVISIFEIAKAYDLYQSEVPSMDNISISLDDGVFTDRDAELDYWIKVVNAGFGTREMAIQKV--LNVTEE 471 (500) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHhc--CCCCHH Confidence 22222222221 10 1123344444445667778888899999999999887543 466544 Q ss_pred ccccc-cCCCCCCCCCCCCCCC Q lcl|Aclame:pro 372 DLPAP-ENTNKKTTGQSNEPVP 392 (392) Q Consensus 372 e~~~~-e~~~~~~~gd~~~p~p 392 (392) +..+. +........+.+++.| T Consensus 472 ea~~~l~~i~~E~~~~~~~~~~ 493 (500) T protein:vir:98 472 KAQEIAAEINTGIVDEINQQRT 493 (500) T ss_pred HHHHHHHHHHHhccccCCCCCc Confidence 32211 1110001112222223 No 164 >protein:vir:4898 Length: 502 # NCBI annotation: gp502 # Family: family:all:125 # MgeID: mge:107 # MgeName: Sfi11 # Cross-refs: genbank:acc:NP_056676;genbank:gi:9635011;genbank:GeneID:1262662 Probab=98.18 E-value=3.1e-06 Score=50.78 Aligned_cols=380 Identities=13% Similarity=0.072 Sum_probs=166.5 Q ss_pred Ccch---hhHhhcccccc--cccccccccccccchhhhhhhh-cCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceee Q lcl|Aclame:pro 1 MILP---ILNFINQTNDP--PEVGSVQSYFPDGNDAQIMESL-LGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINA 74 (392) Q Consensus 1 m~Mg---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~ 74 (392) .... +.+++...... +.-.....++ .+........- ....+.. ..-+.++.....|+..++-+-.-|+++ T Consensus 38 ~~~~~~~i~~~i~~h~~~~~~rl~~l~~yY-~g~~~~i~~~~~~~~~~~~---~~ki~~n~~k~Ivd~~~~yl~g~p~~~ 113 (502) T protein:vir:48 38 MVNNWELLKNFINHHKLRQAPRIQELLDYA-RGENHDVLKSGRRKDNEMA---DKRAVHNYGRMISKFKTGYLAGNPIRV 113 (502) T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccccccccc---cceeecchHHHHHHHHhhhhcccCeeE Confidence 1111 11111111000 0000000000 00000000000 0000000 001122334456666666666667665 Q ss_pred ecccc------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCcc-c-eEE-E Q lcl|Aclame:pro 75 EKKKN------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE-N-GMY-Y 145 (392) Q Consensus 75 ~~~~~------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~-~-~~~-~ 145 (392) .-.+. ...+.+-...-........+..+++.+|.+|+++.++.+|.+. +..++|..+.+..+... + ... . T Consensus 114 ~~~d~~~~~~~~~~l~~~~~~N~~~~~~~~~~~~~~~~G~a~~~v~~dedg~~~-i~~~~p~~~~~vydd~~~~~~~~~i 192 (502) T protein:vir:48 114 EYDDNEDNSQNDDAIKRIGRINDIDTHNRNLIRDLSQTGRAYEVIYRSEYDETR-IKRLSPLETFVIYDNSLEDNSIAAV 192 (502) T ss_pred ecCCccchhHHHHHHHHHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCceE-EEEEcccceEEEEcCCCCCceEEEE Confidence 43221 1112222223344556678899999999999999998888764 67788888888776432 2 221 1 Q ss_pred E-EEe--cCcceeeeEEEeceeEEEecCC----------Ccc---------cccccCCHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 146 N-ITF--DDPKIEPILQAPQSDLIHMKLL----------SID---------GGKTGISPLYSLRRESKIQRASDRLTISS 203 (392) Q Consensus 146 ~-~~~--~~~~~~~~~~~~~~~vih~~~~----------~~~---------~~~~G~s~~~~~~~~i~~~~~~~~~~~~~ 203 (392) + +.. ..........+.+..++++... +.. ....|.|.+..+...++....+.....+. T Consensus 193 r~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~d~~~S~~~~~ 272 (502) T protein:vir:48 193 RYYNRGTLQNAKDVVEIYTNQHIYTLDASDSFNEISVTPHAFGTVPITEFLNNADGIGDYETELYLIDLYDSAESDTANH 272 (502) T ss_pred EEEEEeecCCcEEEEEEEeCCeEEEEEeCCceeeccceecCCCccceEEecCCCCCCCchhhhHHHHHHHHHHHHHHHHH Confidence 1 111 1111111122344444333321 000 12358888888888888887777777777 Q ss_pred HHcCCCcceEEEeCCCCCchHHHHHHHHHH-HhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 204 LNSSLNVPGVLTVKGGGLLSDKDKASRSRS-FMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLP 282 (392) Q Consensus 204 ~~ng~~~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP 282 (392) ++-...|-.++.........+ ......+. .......+..-..+++.+++-++....+..+....+...+.|+..-++| T Consensus 273 ~~~~~~~~lv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~L~~~I~~~s~~p 351 (502) T protein:vir:48 273 MSDMADAILAIYGDLALPQGM-QASDMKRTRLMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAYKTRLNKDIHVFTNTP 351 (502) T ss_pred HHHhcCceeeeecCccccccc-chhhhhhcceeeccccccccccccCcceeEeeecCCHHHHHHHHHHHHHHHHHHhCCC Confidence 777777766655433222221 11111111 0000110111112344555555554444556667888889999999999 Q ss_pred HHHcCCcccccchHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhh------hhhcccchhhhhcchHHHH Q lcl|Aclame:pro 283 DSYIGGQGDQQSSIQQISG--------------MYASALNRYLRPAISELEYKLS------DHISVNMRPAIDPLGDNYL 342 (392) Q Consensus 283 ~~~lg~~~~~~~~~~~~~~--------------~~~~~l~p~l~~i~~~l~~~l~------~~~~~d~~~~~~~~~~~~~ 342 (392) ....+..+. +.+..+.+. .+...+.-.++.+.+.+...-. ..+++.+...+..+..+.+ T Consensus 352 ~~~~~~~~~-n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~i~f~~~~p~d~~e~a 430 (502) T protein:vir:48 352 DMSDNHFSG-NASGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFKDFDESRLKITFTPNLPKSLYEQV 430 (502) T ss_pred CcCcccccc-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccceEEeCCCCCcCHHHHH Confidence 876643222 222223322 2222222222222222221100 0122223333334556666 Q ss_pred HHHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc---------------------cCCCC--CCCCCCCCCCC Q lcl|Aclame:pro 343 STISTATRWGALAENQATFVLQEAGYIPK---DLPAP---------------------ENTNK--KTTGQSNEPVP 392 (392) Q Consensus 343 ~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~---------------------e~~~~--~~~gd~~~p~p 392 (392) ..+.++ .|+++..-+.+++ |+..+ |+.++ ++.+. ....++.+.+| T Consensus 431 ~~~~kl--~g~iS~et~l~~l---~~v~D~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~d~~~e~~~~~~~~~~ 501 (502) T protein:vir:48 431 SILNDL--GGQVSQETALSLS---GLVENPTEELDKINEESSKIDFKGYPSYFYDNVGKYTDEVKETHTDDFERVY 501 (502) T ss_pred HHHHHH--hccCcHHHHHHhC---CCCCCHHHHHHHHHHHHHhhhhhcccccccccccccCCCccCCCCcCcCCCC Confidence 666666 4788876666554 44321 12111 00000 11223333444 No 165 >protein:vir:1634 Length: 409 # NCBI annotation: Structural protein # Family: family:all:524 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695055;genbank:gi:23455746;genbank:GeneID:955506 Probab=98.17 E-value=3.3e-06 Score=50.66 Aligned_cols=342 Identities=10% Similarity=-0.024 Sum_probs=150.9 Q ss_pred CcchhhHhhcccccccc--cccccccccccchhhhhhhhcCCCCcccchhhh----hcchHHHHHHHHHHHhhhhCceee Q lcl|Aclame:pro 1 MILPILNFINQTNDPPE--VGSVQSYFPDGNDAQIMESLLGDNNEWVSARAA----LRNSDLFSIILQLSSDLAIVKINA 74 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a----~~~~~v~~~i~~ia~~ia~~p~~~ 74 (392) |-..++..+.+.-.... ......+. .+.. .+ ..-+..+..+.. +......-+|+.++..+. +.= T Consensus 1 ~~~~~i~~L~~~~~~~~~r~~~~~~yY-~g~~-----~~-~~~~~~~p~~~~~~~~~v~nw~~~iVds~a~rl~---~~G 70 (409) T protein:vir:16 1 MTEKGIGYLRFKLSVHKRRAEMRYEQY-AMKH-----VD-RFKGITIPQALSQQYRSILGWCAKGVDSLADRLV---FRE 70 (409) T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHH-hccC-----ch-hhcchhhhHHHHHHHhhhcChhHHHHHHhHhhcc---ccc Confidence 66666655543321110 00000000 0000 00 000011111100 011112234444444322 222 Q ss_pred eccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEE--EecCc Q lcl|Aclame:pro 75 EKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNI--TFDDP 152 (392) Q Consensus 75 ~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~--~~~~~ 152 (392) ++.+... +.+-...-........+..+.+.+|.+|+.+..+.+|+| .+.+++|..+...++...+.+...+ ...+. T Consensus 71 f~~~d~~-l~~i~~~N~ld~~~~~~~~~al~yG~sf~~v~~~~dg~~-~i~~~sP~~~~~i~D~~~~~~~~a~~~~~~d~ 148 (409) T protein:vir:16 71 FENDDFT-VNEIFEENNPDIFFDSTVLSALIASCSFTYISKGENDAV-RLQVIEATNATGIIDPITGLLTEGYAVLERDE 148 (409) T ss_pred ccCcchH-HHHHHHhcChhHHHHHHHHHHHHhCceeEEEecCCCCce-EEEEEcccceEEEeecccccceeeeEEEEecC Confidence 2211111 111111122233445677888899999999998888976 5778888888877766544332211 11111 Q ss_pred ceee--eEEEec----------------------eeEEEecCCCcccccccCCH----HHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 153 KIEP--ILQAPQ----------------------SDLIHMKLLSIDGGKTGISP----LYSLRRESKIQRASDRLTISSL 204 (392) Q Consensus 153 ~~~~--~~~~~~----------------------~~vih~~~~~~~~~~~G~s~----~~~~~~~i~~~~~~~~~~~~~~ 204 (392) .++. ...+.+ -.|+++.+....+..+|.|- +..+.+.+.....-......|+ T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvV~f~n~~~~~~~~G~seI~~~v~~l~da~~r~~~~~~~~~e~~ 228 (409) T protein:vir:16 149 NNNVVLEAHFLPDRTDYYYRDSRNNISIANPTGNPLLVPIIHRPDAVRPFGRSRITRSGMYWQSNAKRTLERADVTAEFY 228 (409) T ss_pred CCceEEEEEEecCcEEEEEecCccccceecCCCCcceEEecccccccccCCccccchhHHHHHHHHHHHHHHHHHHHHHh Confidence 1110 011111 22445544433344568774 3444444444444444444555 Q ss_pred HcCCCcce-EEEeCCCCCchHHHHHHHHHHHhccccCCceeecc-----CCceEeecccChhhHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 205 NSSLNVPG-VLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLD-----DLEEFTALEIKSNVAQLLSQTDWTSKQYAKV 278 (392) Q Consensus 205 ~ng~~~~~-il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~-----~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~ 278 (392) .+ |.- ++-.+.+....+. +.. ..++++.++ ++.++.++....-+ .|++..+.....+|.+ T Consensus 229 a~---pqr~i~G~d~d~~~~~~----~~~------~~~~i~~~~~d~~g~~~~v~q~~~~~l~-~~~~~l~~~~~~~a~~ 294 (409) T protein:vir:16 229 SF---PQKYVTGLSDDAEPMET----WKA------TVSSMLQFTKDEDGDKPTLGQFTQPSMS-PFTEQLRTAAAGFAGE 294 (409) T ss_pred cC---hhheeEecCCCCCccch----hhh------hhhHhhccCCCCCCCCceEEecCCCChh-HHHHHHHHHHHHHhhh Confidence 43 433 3333332222221 111 112344442 24566666544322 4899999999999999 Q ss_pred hcccHHHcCCcccccchHHHHHHHHHHHHHHHHHH----HHHHHHHH----hh--h----------hhcccchhhhhcc- Q lcl|Aclame:pro 279 YGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRP----AISELEYK----LS--D----------HISVNMRPAIDPL- 337 (392) Q Consensus 279 fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~----i~~~l~~~----l~--~----------~~~~d~~~~~~~~- 337 (392) =++|++.+|+.+.+.++.++.++-. ..|.-.++. +.+.+.+. +. . .+++.......++ T Consensus 295 s~lP~~~lg~~~~NpsSa~Ai~a~~-~~L~~ka~~k~~~fg~~l~~~~rla~~~~~~~~~~~~~~~~~~v~W~~~~~~~~ 373 (409) T protein:vir:16 295 TGLTLDDLGFVSDNPSSVEAIKASH-ENLRLAGRKAQRSLGAGLLNVAYLAACLRDDVPYLREQFSKTKPKWEPLFEADA 373 (409) T ss_pred cCCCHHHcccccCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccchhhccceEEecCCCCcch Confidence 9999999998665434444433221 111111222 22222211 10 0 1111122222222 Q ss_pred --hHHHHHHHHHHHhCC--CcCHHHHHHHHHhCCCCccc Q lcl|Aclame:pro 338 --GDNYLSTISTATRWG--ALAENQATFVLQEAGYIPKD 372 (392) Q Consensus 338 --~~~~~~~~~~~~~~g--~~T~nE~R~~l~~~g~~~~e 372 (392) ....+..+.+++++| +...+-+++++ |+...| T Consensus 374 ~s~a~~aDa~~Kl~~a~~~~~~~~v~~~~~---g~~~~d 409 (409) T protein:vir:16 374 SMLSLIGDGAIKLNQAIPEFINKDTIRDLT---GIKGAE 409 (409) T ss_pred hhHHHHHHHHHHHHhhcccccchhHHHHhc---cCCCCC Confidence 234456677777775 33345556655 777655 No 166 >protein:vir:38 Length: 496 # NCBI annotation: putative portal protein # Family: family:all:898 # MgeID: mge:2 # MgeName: A118 # Cross-refs: genbank:acc:NP_463464;swissprot:trembl:q9t1c0;genbank:gi:16798786;uniprot:Q9T1C0;genbank:GeneID:922383 Probab=98.11 E-value=4.4e-06 Score=49.95 Aligned_cols=378 Identities=11% Similarity=0.007 Sum_probs=165.8 Q ss_pred CcchhhHhhcccccc------ccccccccc--ccccc---hhhhhhhhcCCC-----------CcccchhhhhcchHHHH Q lcl|Aclame:pro 1 MILPILNFINQTNDP------PEVGSVQSY--FPDGN---DAQIMESLLGDN-----------NEWVSARAALRNSDLFS 58 (392) Q Consensus 1 m~Mg~~~~~~~~~~~------~~~~~~~~~--~~~~~---~~~~~~~~~~~~-----------~~~v~~~~a~~~~~v~~ 58 (392) |.=+|+.+++.-... .+.-..... .++.. .......+.+.. +.... ..-+....... T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~yy~g~~~~~~~~~~~~~~~~~~-~~~~~~n~~k~ 79 (496) T protein:vir:38 1 MINQIIAGVKGVMRRMGLLKALKDVKDHKKVNANDEDYKYIDMWKRLYQGHYAEWHNLNYEHNGNPVN-RRQLSMNLPKV 79 (496) T ss_pred ChhHHHHHHHHHHHHhccchhhHHHHhcCCCcCCHHHHHHHHHHHHHhcCCCchhhcchhccCCCccc-cceeecchHHH Confidence 444444433321100 000000000 00000 001111121110 00000 11122344455 Q ss_pred HHHHHHHhhhhCceeeecc--ccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeee Q lcl|Aclame:pro 59 IILQLSSDLAIVKINAEKK--KNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYY 136 (392) Q Consensus 59 ~i~~ia~~ia~~p~~~~~~--~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~ 136 (392) +++..|+-+..=|+.+--. .....+.+=...-....-...++.+...+|.+|+.+..+.+|.+. +..++|..+-+.. T Consensus 80 i~~~~a~~l~~~p~~i~~~d~~~~e~l~~~~~~n~f~~~~~~~~~~a~~~G~~~~~~~~D~~~~~~-i~~v~~~~~~P~~ 158 (496) T protein:vir:38 80 TAKYMSKLLFNEKVKINIDDKAAEEFVLNVLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGNKNVK-VSFATADCMYPLS 158 (496) T ss_pred HHHHHhhhhhCCcceEeeCChHHHHHHHHHHhccCHHHHHHHHHHHHhhhCcEEEEEEEcCCCcEE-EEEEcccceEEEE Confidence 6777777666555554321 111112111111233444566788888999999999888888754 5667777766544 Q ss_pred cCccce--------------EEEEE---EecCcc---------------eeeeEE----------------EeceeEEEe Q lcl|Aclame:pro 137 FEYENG--------------MYYNI---TFDDPK---------------IEPILQ----------------APQSDLIHM 168 (392) Q Consensus 137 ~~~~~~--------------~~~~~---~~~~~~---------------~~~~~~----------------~~~~~vih~ 168 (392) .+.+.. .++.. ...+.. .+..+. ++.--+.|+ T Consensus 159 ~~~~~~~~~~f~~~~~~~~~~y~~le~h~~~~~~~~I~~~~y~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~f~~~ 238 (496) T protein:vir:38 159 NDSENVDECVIANSFHKNNKYYTLLEWNEWQGDVYTVTTELYQSDDPNELGTKVSLTLLFDDIEPVVPLPDFTRPTFIYI 238 (496) T ss_pred ecCCcEEEEEEEEEEEeCCeEEEEEEEEEEeCceEEEEEEEEecCCccccCccccccccccccccceeecCCCcceEEEe Confidence 333322 11000 000000 000000 011113344 Q ss_pred cCCC----cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCC----chHHHHHHHHHHHhccccC Q lcl|Aclame:pro 169 KLLS----IDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGL----LSDKDKASRSRSFMKRSRS 240 (392) Q Consensus 169 ~~~~----~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~----~~~~~~~~~~~~~~~~~~~ 240 (392) +.+- .....+|+|.+..+...++....+.....+-++.| ++..++ +.... ..+-.... .+...... T Consensus 239 ~~~~~N~~~~~~p~G~Sd~~~~~~lid~ld~~~s~~~~~~~~~-~~~i~v--~~~~l~~~~~~~g~~~~---~~~~~~~~ 312 (496) T protein:vir:38 239 KPNIANNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKLG-KKKVLV--PSSFVKTAVNLDGSTTQ---YFDSTDEA 312 (496) T ss_pred cCCcccccccCCcCCCchHhhHHHHHHHHHHHHHHHHHHHhhc-ccceec--chHHhhccCCCCCcccc---CCCCccce Confidence 4321 22345699999999988888877766555556543 333332 11100 00000000 00000000 Q ss_pred Cce---eeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHH--------------H Q lcl|Aclame:pro 241 GGP---VVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGM--------------Y 303 (392) Q Consensus 241 g~~---~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~--------------~ 303 (392) -.. .-.+++..++.++......++.+..+...++|+...|+|+..+|...++..+..+...- + T Consensus 313 ~~~~~~~~~~~~~~i~~~~~~i~~e~~~~~l~~~l~~i~~~~g~~~~~f~~~~~g~~tAtei~~~~~~l~~~~~~~~~~~ 392 (496) T protein:vir:38 313 FFLYQGDQDDNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLKTATEVVSEKSETYQTKNSHSQLI 392 (496) T ss_pred EEEeecCCCcccccceeeccccCHHHHHHHHHHHHHHHHHhhCCChhhcCCCccccchHHHHHHHHHHHHHHHHHHHHHH Confidence 001 11233445777777777778899999999999999999999998654443333222211 1 Q ss_pred HHHHHHHHHHHHHHHHHHh--h------hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccc-- Q lcl|Aclame:pro 304 ASALNRYLRPAISELEYKL--S------DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDL-- 373 (392) Q Consensus 304 ~~~l~p~l~~i~~~l~~~l--~------~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~-- 373 (392) ...|...++.+.+-..... . ..+.+....-+..+..+.+..+..++.+|+++.-.++..+ .|+...+. T Consensus 393 ~~~l~~l~~~il~~~~~~~~~~g~~~~~~~i~v~f~d~i~~d~~~~~~~~~~~~~~GiiS~et~l~~~--~~~~d~ea~~ 470 (496) T protein:vir:38 393 EQGIKEMIVSILEVGKFIEAYSGEVVELDTITVDFDDSIAQDEDTTINRYTNAKNQGMIPLKIALQRA--WNITEAEADE 470 (496) T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHhc--CCCChHHHHH Confidence 1222222222221111000 0 0122222233334566777888888899999988776532 23332222 Q ss_pred --ccc--cCCCCCC-------CCCCC Q lcl|Aclame:pro 374 --PAP--ENTNKKT-------TGQSN 388 (392) Q Consensus 374 --~~~--e~~~~~~-------~gd~~ 388 (392) .++ |.-...+ +||++ T Consensus 471 el~ri~~E~~~~~~~~d~~~~~~~~e 496 (496) T protein:vir:38 471 WAEMLAKEKQAEMPNNDMNGIFGEEE 496 (496) T ss_pred HHHHHHHhhhccCccccccCCCCCCC Confidence 111 1101111 22222 No 167 >protein:vir:80959 Length: 499 # NCBI annotation: gp3 # Family: family:all:898 # MgeID: mge:1886 # MgeName: A500 # Cross-refs: genbank:acc:YP_001468389;genbank:gi:157324963;genbank:GeneID:5601394 Probab=98.00 E-value=7.6e-06 Score=48.66 Aligned_cols=380 Identities=12% Similarity=-0.011 Sum_probs=170.6 Q ss_pred CcchhhHhhcccccc------ccccccccc--ccccch---hhhhhhhcCCCC-----------cccchhhhhcchHHHH Q lcl|Aclame:pro 1 MILPILNFINQTNDP------PEVGSVQSY--FPDGND---AQIMESLLGDNN-----------EWVSARAALRNSDLFS 58 (392) Q Consensus 1 m~Mg~~~~~~~~~~~------~~~~~~~~~--~~~~~~---~~~~~~~~~~~~-----------~~v~~~~a~~~~~v~~ 58 (392) |-=+|+++++.-... .+....... .++... .....++.+... .... +.-++...... T Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~Y~g~~~~~~~~~~~~~~~~~~-~~~~s~n~~~~ 79 (499) T protein:vir:80 1 MINQIIAGVKGVMRRMGLLKSLKDVTDHKKVNANDEDYKYIDMWKRLYQGNYAEWHNLNYEHNGNPVN-RRQLSMNLPKV 79 (499) T ss_pred ChhHHHHHHHHHHHHhccccchhhhhcCCCCcCCHHHHHHHHHHHHHhcCCcchhhccccccCCCccc-cceeecchHHH Confidence 555666555432211 000000000 000000 111122222100 0000 11223334455 Q ss_pred HHHHHHHhhhhCceeeec--cccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeee Q lcl|Aclame:pro 59 IILQLSSDLAIVKINAEK--KKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYY 136 (392) Q Consensus 59 ~i~~ia~~ia~~p~~~~~--~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~ 136 (392) .++..|+-+-.=|..+.- ......+.+=........-....+...+..|.+|+.+..+.+|++. +..++|..+-+.. T Consensus 80 iv~~~a~~l~~ep~~i~~~d~~~~e~l~~~~~~n~f~~~~~~~~~~a~~~G~~~~~~~~D~~~~~~-i~~v~a~~~~Pi~ 158 (499) T protein:vir:80 80 TAKYMSKLLFNEKVKINIDDETAEEFVLNVLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGNKNVK-VSFATADCMYPLS 158 (499) T ss_pred HHHHHHHhhhCCcceEeeCCHHHHHHHHHHHhhccHHHHHHHHHHHHhhcCcEEEEEEECCCCcEE-EEEEcCCceEEEE Confidence 666666666554544332 2222222211111223333455666777789999999888888755 5677777766543 Q ss_pred cCccceE--------------EEE-------------EEe--------cCcceeeeEE----------------EeceeE Q lcl|Aclame:pro 137 FEYENGM--------------YYN-------------ITF--------DDPKIEPILQ----------------APQSDL 165 (392) Q Consensus 137 ~~~~~~~--------------~~~-------------~~~--------~~~~~~~~~~----------------~~~~~v 165 (392) .+.+... +.. |.+ .....|..+. +..--+ T Consensus 159 ~d~~~~~~~~f~~~~~~~~~~y~~lE~h~~~~~~~~~y~I~n~~~~~~~~~~lG~~v~l~~~~~~~~~~~~~~~~~~p~f 238 (499) T protein:vir:80 159 NDSENVDECLIANSFHKNNKYYKLLEWNEWKGEKEEVYTVTTELYQSDDPNELGGKVSLKLLFNDIEPVVPLPSLTRPTF 238 (499) T ss_pred ecCCCeEEEEEEEEEeecCeEEEEEEEEEecccceeeEEEEEEEEeccCccccCcccchhhhccCcCCceeecCCCccce Confidence 3322210 000 000 0000010000 011113 Q ss_pred EEecCCC----cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE-----EeCCCCCchHHHHHHHHHHHhc Q lcl|Aclame:pro 166 IHMKLLS----IDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVL-----TVKGGGLLSDKDKASRSRSFMK 236 (392) Q Consensus 166 ih~~~~~----~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il-----~~~~~~~~~~~~~~~~~~~~~~ 236 (392) .|++.+- ..+...|+|.+..+...++..........+-++.|- ...++ ....+..-. . ... +.. T Consensus 239 ~~~~~~~~N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~~~~-~~i~v~~~~l~~~~~~~g~-~-~~~----~~~ 311 (499) T protein:vir:80 239 IYIKPNIANNKNLTSPLGISVYANALDTLKTLDLMFDSYYQEFKLGK-KKVLVPSSFVKTAVNLDGS-T-TQY----FDS 311 (499) T ss_pred EeecCCccccccCCCccCCchHhhHHHHHHHHHHHHHHHHHHHHhcc-cceecchhhhhccCCCCCC-c-ccC----CCc Confidence 4555432 123456999999999999888887766666676543 32222 111100000 0 000 000 Q ss_pred cccCCceee---ccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHH---HHHHHH Q lcl|Aclame:pro 237 RSRSGGPVV---LDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYA---SALNRY 310 (392) Q Consensus 237 ~~~~g~~~v---l~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~---~~l~p~ 310 (392) .....+... -+++-.++.++....+-++.+..+...++|....|+++..+|...++..+..+...-.. .++.-. T Consensus 312 ~~~~~~~~~~~~~~~~~~i~~~~~~ir~e~~~~~l~~~l~~i~~~~g~s~~~fg~~~~g~~TAtei~s~~~~l~~~~~~~ 391 (499) T protein:vir:80 312 TDEAFFLYQGEQDDNGKAIKDISVEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLKTATEVVSEKSETYQTKNSH 391 (499) T ss_pred ccceeeEeeccCCCCcCceeEecCcCChHHHHHHHHHHHHHHHHhcCCChhhcCCCcccchhHHHHHHHHHHHHHHHHHH Confidence 000001111 12334578888888878889999999999999999999999865444333322221111 122222 Q ss_pred HHHHHHHHHHHh---h----------------hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc Q lcl|Aclame:pro 311 LRPAISELEYKL---S----------------DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK 371 (392) Q Consensus 311 l~~i~~~l~~~l---~----------------~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~ 371 (392) .+.++..|.+.+ + ..+.++...-+..+.++.+.....++.+|+++.-.++... .|.... T Consensus 392 ~~~~~~~l~~l~~~il~~~~~~~~~~~~~~~~~~v~v~f~d~i~~d~~~~~~~~~~~~~~Gi~S~et~l~~~--~~~~d~ 469 (499) T protein:vir:80 392 SQLIEQGIKEMIVSILEVGKLIKAYDGDTVELDTITVDFDDSIAQDEDTTINRYTTAKNQGMIPLKIALQRA--WNITEA 469 (499) T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCCCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHhhc--CCCChH Confidence 222222222210 0 1133333333445667777888899999999988776432 233322 Q ss_pred c----cccc--cC---CCC-CCCCCCCCCC Q lcl|Aclame:pro 372 D----LPAP--EN---TNK-KTTGQSNEPV 391 (392) Q Consensus 372 e----~~~~--e~---~~~-~~~gd~~~p~ 391 (392) + +.++ |. ++. -.+|..++.- T Consensus 470 ea~~el~~i~~E~~~~~~~~d~~g~~ge~e 499 (499) T protein:vir:80 470 EADEWAEMLAKEKQAEIPNNDMTGIFGEEE 499 (499) T ss_pred HHHHHHHHHHHHhhcCCCCCCccccCCCCC Confidence 2 1111 11 110 0111111111 No 168 >protein:vir:5839 Length: 533 # NCBI annotation: similar to portal vertex protein of head # Family: family:all:1036 # MgeID: mge:123 # MgeName: RM 378 # Cross-refs: genbank:acc:NP_835625;genbank:gi:30044028 Probab=97.98 E-value=8.4e-06 Score=48.41 Aligned_cols=387 Identities=15% Similarity=0.110 Sum_probs=170.8 Q ss_pred chhhHhhccccc---------------ccccccccccccccch-----hhhhhhhcCCCC------cccchhhhhcchHH Q lcl|Aclame:pro 3 LPILNFINQTND---------------PPEVGSVQSYFPDGND-----AQIMESLLGDNN------EWVSARAALRNSDL 56 (392) Q Consensus 3 Mg~~~~~~~~~~---------------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~------~~v~~~~a~~~~~v 56 (392) |+=|.+..+..+ ++.......+.+.... ......+.+... .....+.++.+|.| T Consensus 1 ~~~~~~w~~~de~~~~~~~~~~~~~~~~p~~~dG~s~i~~~~~~~~~~~~~~~~~~gg~~~n~~eLI~~YR~ma~~~pEV 80 (533) T protein:vir:58 1 MPSLEKYKKLNEAVNFTNFLSPMYGMGAPHGAGGSSMIPINMYHPFATAGYASRFYGGIEFNRFFLYDMYDRMDYTDPLI 80 (533) T ss_pred CCCcchhhhhhHHHHHHHhhchhhcccCccCCCCCccccCCCCcchhhhhhhhhhhccccccHHHHHHHHHHhhccCcch Confidence 333322222110 1111111122221111 111111222111 11134456678999 Q ss_pred HHHHHHHHHhhhhC-----ceeeeccccc---cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEee-ccCCceEEEEEe Q lcl|Aclame:pro 57 FSIILQLSSDLAIV-----KINAEKKKNQ---GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR-NANGADMKWEYL 127 (392) Q Consensus 57 ~~~i~~ia~~ia~~-----p~~~~~~~~~---~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r-~~~G~~~~l~~l 127 (392) ..||+.|.+.+.-+ |+.+--+... .+..+=...+....--+.++..|...|..|..+.- +.++-+.+|..| T Consensus 81 d~AideIvneaiv~d~~~~pV~v~l~~~e~s~~iK~kI~~lldf~~~~~~~fR~WYVDGriy~Hkiik~~k~GI~elr~l 160 (533) T protein:vir:58 81 STVLDIIADECTIPNENGNIVDVVTKDIELAKAILSYLDYVINIEKNAYPIIRNMIKYGDMFLHILEKGSDGTIEKFQVV 160 (533) T ss_pred hhHHHhhhceeeEecCCCceeEeecccccccHHHHHHHHHHhcchhhhhHHHHhhhhcceeEEEeccCCcccchhhheec Confidence 99999999987533 2211111000 00000001222222234467788899999988863 244558899999 Q ss_pred ccccceeeecCccceEEEEEEec---CcceeeeEEEeceeEEEecCCC-cccccccCCHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 128 RPSQVNTYYFEYENGMYYNITFD---DPKIEPILQAPQSDLIHMKLLS-IDGGKTGISPLYSLRRESKIQRASDRLTISS 203 (392) Q Consensus 128 ~~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~vih~~~~~-~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~ 203 (392) +|..++.+.+..+...|+.|... .......+.++.+.|+|+..-- .....+++|-|..+.+.+....-++...--+ T Consensus 161 DPr~i~~vr~~~t~~eyyvy~~~~~~~~s~~~~~kI~~daI~y~~SGl~d~~~~~iisyLhkAiKp~NQLkmiEDAlVIY 240 (533) T protein:vir:58 161 SPYIFSKRYNPETDTWYYVITDVYRNVVSGYFNEDIPEEDVIHFSHKIDTNFFPYGRSYLESARAIWNQLRLMEDALMLY 240 (533) T ss_pred CCeeeEEEEeeccceEEEeecccccccccCccccccchhheeeeeeccccCCCCceehhhhHHHHHHHHHHHHHHHHHHH Confidence 99999998887777666555322 1223344678899999986432 2234568898888877666655555544333 Q ss_pred HHcCCCcceEEEeCCCCCc---hHHHHHHHHHHHhc----cccCCce----------eec----------cCCceEeecc Q lcl|Aclame:pro 204 LNSSLNVPGVLTVKGGGLL---SDKDKASRSRSFMK----RSRSGGP----------VVL----------DDLEEFTALE 256 (392) Q Consensus 204 ~~ng~~~~~il~~~~~~~~---~~~~~~~~~~~~~~----~~~~g~~----------~vl----------~~g~~~~~l~ 256 (392) =-..+.-+=|..++=+... .++-.+.....+.. ....|.+ -.| ..|.+++.|. T Consensus 241 RisRAPeRRvFYIDVGNlpk~KAeqYl~~im~k~kNklvYDa~TGev~ddrk~m~~~sMlEDyWLpRReGgrgTEI~TLp 320 (533) T protein:vir:58 241 RVVRSVDRRVFYVDVGNVPPDKINEYLTNIAMQYKRDYWVRNNQNQFLGIDNYFSIESILKDYFIPRRGDRRAVEIDILQ 320 (533) T ss_pred hhcCChhheEEEEeecCCCccCHHHHHHHHHHhcccceEEeccCCeEeeccchhhhhhhHhhhcccccCCCccceeeecC Confidence 2222211223333222111 12222333333321 1222322 111 2467888877 Q ss_pred cChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHH--HHHHHHHHHHHHHHHHHHHHHHHHhhh-hhcc--cch Q lcl|Aclame:pro 257 IKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQ--QISGMYASALNRYLRPAISELEYKLSD-HISV--NMR 331 (392) Q Consensus 257 ~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~--~~~~~~~~~l~p~l~~i~~~l~~~l~~-~~~~--d~~ 331 (392) .. + +.-++-.++..+.+..+++||.+-|+..+......+ -.+-=+..+|.-+-....+.|..+|.- .+-. +++ T Consensus 321 Gg-~-lgemeDV~YF~kkLy~ALnVP~sRl~~e~~fgr~~eItRDEiKF~KFI~rLR~rF~~ll~~qLilk~iit~eew~ 398 (533) T protein:vir:58 321 GS-K-VDLAEDVEYMLNRLISALKVPKAFIGYEGDVNAKNTLATQDIKFNNTIKRIQGFFVEELERMVRMNKEFADQDFR 398 (533) T ss_pred CC-C-CCcHHHHHHHHHHHHHHhCCCeeecCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHhcccccccCcchhhee Confidence 53 3 556778888899999999999999975443322211 112224555555555555555555421 1100 001 Q ss_pred hhhhcch--HHH------HHHHHHHHhC-CC------------cCHHHH---HHHHH---hCCCCcc--c---ccc---- Q lcl|Aclame:pro 332 PAIDPLG--DNY------LSTISTATRW-GA------------LAENQA---TFVLQ---EAGYIPK--D---LPA---- 375 (392) Q Consensus 332 ~~~~~~~--~~~------~~~~~~~~~~-g~------------~T~nE~---R~~l~---~~g~~~~--e---~~~---- 375 (392) ..+..|. .++ ...++.+-+. +. +|- |. .++.. ..|.-+. + +.. T Consensus 399 ~~f~~Dn~f~ElKe~Eil~~Ri~~l~~~dpyvgk~yi~k~ILr~td-ei~~q~e~ie~E~~~~~~~~~~~~~e~~~~~~~ 477 (533) T protein:vir:58 399 LVMNRSNSIVEGERFAVIEQRIGIAERLKGWVREDWIYSNILQIPY-DLKPQEEVAEAAGGGGLFDTGGFGEETTPADFL 477 (533) T ss_pred eeeeccchHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHhcCCh-hhhHHHHHHHHhhcCCCCCCCCcccccCCcccC Confidence 1111111 111 1111111110 01 111 11 11111 1222111 0 100 Q ss_pred ccCCCCCC-------CCCCCCCCC Q lcl|Aclame:pro 376 PENTNKKT-------TGQSNEPVP 392 (392) Q Consensus 376 ~e~~~~~~-------~gd~~~p~p 392 (392) .+-..|++ .+...+|.| T Consensus 478 ~~~~~p~~~~~~~~~~~~~~~~~~ 501 (533) T protein:vir:58 478 GERGSPIESPRGRTEFDFGTEGGE 501 (533) T ss_pred ccccCcccCCCChhhHhcccCCcc Confidence 00011110 111122333 No 169 >protein:vir:107517 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1481 # MgeName: PG1 # Cross-refs: genbank:acc:NP_943786;genbank:gi:38638411;genbank:GeneID:2657197 Probab=97.96 E-value=3.3e-06 Score=50.64 Aligned_cols=384 Identities=11% Similarity=0.062 Sum_probs=197.9 Q ss_pred CcchhhHhhcccccccccccc------cccccccchhhhhhhh-cCC--CCcccch-hhhhcchHHHHHHHHHHHhhhhC Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSV------QSYFPDGNDAQIMESL-LGD--NNEWVSA-RAALRNSDLFSIILQLSSDLAIV 70 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~--~~~~v~~-~~a~~~~~v~~~i~~ia~~ia~~ 70 (392) |.-.=++..++.+-.+..+.. +.+.++ ....+... .+. +...... +-.-.++.+.-.+..++++++++ T Consensus 1 ma~~~lr~~rrpk~~p~~~rr~~ltaAsq~~~~--p~~~~kt~~~~~ar~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~ 78 (639) T protein:vir:10 1 MAATSLRVVRRPKGSAPAARRRSLTAASQLITD--PQKQMKTSLMGTARNEWQSEAWDFSESIGELSYYVSWRANSCSRT 78 (639) T ss_pred CCccceeeeecCCCCCcchhhHHHhhhhhccCC--cccchhhhccccchhhhhhhhhhhhhhhhhHHHHhhhhhhhhcee Confidence 655555666655433321111 111110 00111111 110 0000011 11123466778899999999999 Q ss_pred ceeeecccccc------c-cc--------------cCCccCCHHHHHHHHHHHHHHhCCeeEEEe-eccCC------ceE Q lcl|Aclame:pro 71 KINAEKKKNQG------I-ID--------------NPSTNANKHGFWQSMFAQLLLGGEAFAYRW-RNANG------ADM 122 (392) Q Consensus 71 p~~~~~~~~~~------~-~~--------------~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~-r~~~G------~~~ 122 (392) .+..-+-+.+. + .+ ---..+...++++.+..+|..-|++|+.+. +..++ .+. T Consensus 79 rL~as~idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~~~~~~~~~~ 158 (639) T protein:vir:10 79 TLIPSAIDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKDPVTGLAAPR 158 (639) T ss_pred eeEeeeeccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCccccCcccccc Confidence 88765433111 1 01 122346778899999999999999997754 33333 234 Q ss_pred EEE-EeccccceeeecCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 123 KWE-YLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTI 201 (392) Q Consensus 123 ~l~-~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~ 201 (392) +-| .+....+.. +.++......- ++... .+.-..+-++.+=.+.+.....--||+.++...+.......+... T Consensus 159 ~~W~vvs~~Ei~~---~~~~~~~i~lP-dG~~h--e~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i~ 232 (639) T protein:vir:10 159 ARWYAVTREEIKS---KAGETAEISLP-DGKTH--EFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIERTTRKIK 232 (639) T ss_pred cceeeeeHHHhcc---cCCCeeEeecC-CCCCc--cccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHHhhhHHH Confidence 444 344445432 22322222111 11111 111122233333334444455678999999999999998888888 Q ss_pred HHHHcCCCcceEEEeCCCCCc---------------------------hHHHHHHHHHHH----hccccCC--ceeecc- Q lcl|Aclame:pro 202 SSLNSSLNVPGVLTVKGGGLL---------------------------SDKDKASRSRSF----MKRSRSG--GPVVLD- 247 (392) Q Consensus 202 ~~~~ng~~~~~il~~~~~~~~---------------------------~~~~~~~~~~~~----~~~~~~g--~~~vl~- 247 (392) +..+....-.|++.+++..+- .+.....+.+.. ...+... -++++. T Consensus 233 aaakSRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~vPiia~~ 312 (639) T protein:vir:10 233 NAAKSRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYIPLVASV 312 (639) T ss_pred HHHHHHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCccceeeeeEee Confidence 888877777888777642211 122332222222 1222222 233332 Q ss_pred ---CCceEeecccCh-hhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHH-H-HHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 248 ---DLEEFTALEIKS-NVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQ-Q-ISGMYASALNRYLRPAISELEYK 321 (392) Q Consensus 248 ---~g~~~~~l~~~~-~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~-~-~~~~~~~~l~p~l~~i~~~l~~~ 321 (392) ..-+++.+.... -+.--+.+|+..+..+|...-|||+.|=+.++.+-+.. + ...-++..|+|.+..|+++|+.. T Consensus 313 p~E~l~~ikhl~f~~ei~e~aiktR~daI~RlA~glDi~pE~LLGl~d~NHWsAWqI~dedvrlHI~P~l~~icdAlT~~ 392 (639) T protein:vir:10 313 AAEHLEKVQHIKFGNEVTEVEIKTRIDAITRLAMGLDVSPERLLGMSKGNHWSAWAIGDEDVQLHIKPVMDLICQAIYND 392 (639) T ss_pred chHHhcCeeeeeecCchhHHHHhhHHHHHHHHHhccCCchhheeecccccceEEEEecccceeeecchhHHHHHHHHHhh Confidence 223455555433 22334789999999999999999996643355442221 1 12335678999999999999998 Q ss_pred hhh----hhcccchhh---hhcchH----HHHHHHHHHHhCCCcCHHHHHHHHHh---CCCCc---cc------------ Q lcl|Aclame:pro 322 LSD----HISVNMRPA---IDPLGD----NYLSTISTATRWGALAENQATFVLQE---AGYIP---KD------------ 372 (392) Q Consensus 322 l~~----~~~~d~~~~---~~~~~~----~~~~~~~~~~~~g~~T~nE~R~~l~~---~g~~~---~e------------ 372 (392) +++ ..++|-... ++.+.. .+...+..++..|.+|-.-.|+.|+. .|+.- .. T Consensus 393 ~Lrp~Le~eGvDp~kYvvW~DaS~Lt~dPd~~deA~qa~drGAIt~eAlR~~lG~~edd~yd~~t~e~~~~~A~~~V~~~ 472 (639) T protein:vir:10 393 ILTPLLAREGIDPTKYILWYDASGLTSDPDLSDEAVEAHDRGAITSAALRRLLNVGEDSGYDLTTLDGCREFAADVVTKN 472 (639) T ss_pred HHHHHHHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCCccHHHHHHHhccccccCCCCCCcHHHHHHHHHHhcCC Confidence 764 334443321 121111 12345667788999999888888742 11210 00 Q ss_pred -------c----ccc--cCC--CCC--CC-----------CCCCCCCC Q lcl|Aclame:pro 373 -------L----PAP--ENT--NKK--TT-----------GQSNEPVP 392 (392) Q Consensus 373 -------~----~~~--e~~--~~~--~~-----------gd~~~p~p 392 (392) . |.. .++ ++. +. |+.+.|.| T Consensus 473 P~li~~~apl~~P~lq~~e~ptp~~a~~~a~~~~~~de~~ga~~~~eP 520 (639) T protein:vir:10 473 PELIAMYAPLLSSQLAGIEFPQPANAIESTREDEEDDEDSGARQQREP 520 (639) T ss_pred cchhhhhhhccCccceecccCCCCCCCCCCCCCCCcccccCCCCCcCC Confidence 0 110 111 111 11 12222344 No 170 >protein:vir:97900 Length: 639 # NCBI annotation: gp8 # Family: family:all:2798 # MgeID: mge:1482 # MgeName: Orion # Cross-refs: genbank:acc:YP_655104;genbank:gi:109391854;genbank:GeneID:4157263 Probab=97.96 E-value=3.3e-06 Score=50.64 Aligned_cols=384 Identities=11% Similarity=0.062 Sum_probs=197.9 Q ss_pred CcchhhHhhcccccccccccc------cccccccchhhhhhhh-cCC--CCcccch-hhhhcchHHHHHHHHHHHhhhhC Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSV------QSYFPDGNDAQIMESL-LGD--NNEWVSA-RAALRNSDLFSIILQLSSDLAIV 70 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~--~~~~v~~-~~a~~~~~v~~~i~~ia~~ia~~ 70 (392) |.-.=++..++.+-.+..+.. +.+.++ ....+... .+. +...... +-.-.++.+.-.+..++++++++ T Consensus 1 ma~~~lr~~rrpk~~p~~~rr~~ltaAsq~~~~--p~~~~kt~~~~~ar~~WQ~eAW~~~d~v~Elry~vgW~~~s~sr~ 78 (639) T protein:vir:97 1 MAATSLRVVRRPKGSAPAARRRSLTAASQLITD--PQKQMKTSLMGTARNEWQSEAWDFSESIGELSYYVSWRANSCSRT 78 (639) T ss_pred CCccceeeeecCCCCCcchhhHHHhhhhhccCC--cccchhhhccccchhhhhhhhhhhhhhhhhHHHHhhhhhhhhcee Confidence 655555666655433321111 111110 00111111 110 0000011 11123466778899999999999 Q ss_pred ceeeecccccc------c-cc--------------cCCccCCHHHHHHHHHHHHHHhCCeeEEEe-eccCC------ceE Q lcl|Aclame:pro 71 KINAEKKKNQG------I-ID--------------NPSTNANKHGFWQSMFAQLLLGGEAFAYRW-RNANG------ADM 122 (392) Q Consensus 71 p~~~~~~~~~~------~-~~--------------~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~-r~~~G------~~~ 122 (392) .+..-+-+.+. + .+ ---..+...++++.+..+|..-|++|+.+. +..++ .+. T Consensus 79 rL~as~idpDtg~PtG~V~~E~d~~~~~v~~~v~~iagG~lGqa~llkr~~~~ltV~GE~wi~~l~r~~k~~~~~~~~~~ 158 (639) T protein:vir:97 79 TLIPSAIDPDTGLPTGEVDIEEDPDAQTVADYVKGIADGPLGQAALIKRAVECMTVVGEVWIAVLIRQEKDPVTGLAAPR 158 (639) T ss_pred eeEeeeeccccCCCCCccccccccCcchHHHHHHhhcCccchHHHHHHHHHhheecccceEEEEEEecCccccCcccccc Confidence 88765433111 1 01 122346778899999999999999997754 33333 234 Q ss_pred EEE-EeccccceeeecCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 123 KWE-YLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTI 201 (392) Q Consensus 123 ~l~-~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~ 201 (392) +-| .+....+.. +.++......- ++... .+.-..+-++.+=.+.+.....--||+.++...+.......+... T Consensus 159 ~~W~vvs~~Ei~~---~~~~~~~i~lP-dG~~h--e~~~~~d~l~RvW~P~prr~~e~dSpvra~l~~l~Ei~~~t~~i~ 232 (639) T protein:vir:97 159 ARWYAVTREEIKS---KAGETAEISLP-DGKTH--EFNRDLDSLVRIWNPRPRKASQATSPVRACLETLREIERTTRKIK 232 (639) T ss_pred cceeeeeHHHhcc---cCCCeeEeecC-CCCCc--cccCCCceEEEEeCCCcccccCCcchhHHHHHHHHHHHHhhhHHH Confidence 444 344445432 22322222111 11111 111122233333334444455678999999999999998888888 Q ss_pred HHHHcCCCcceEEEeCCCCCc---------------------------hHHHHHHHHHHH----hccccCC--ceeecc- Q lcl|Aclame:pro 202 SSLNSSLNVPGVLTVKGGGLL---------------------------SDKDKASRSRSF----MKRSRSG--GPVVLD- 247 (392) Q Consensus 202 ~~~~ng~~~~~il~~~~~~~~---------------------------~~~~~~~~~~~~----~~~~~~g--~~~vl~- 247 (392) +..+....-.|++.+++..+- .+.....+.+.. ...+... -++++. T Consensus 233 aaakSRl~gnGvlfvP~els~p~~~~p~~~~~~~~pg~~v~~~~~~~a~d~l~~~l~qaa~tai~De~S~aA~vPiia~~ 312 (639) T protein:vir:97 233 NAAKSRVMNNGVLFVPAEMSLPAAQAPIPAGQAQIPGAPVPEVSGVPASEQLATMIYQASVAAMEDENSQAAYIPLVASV 312 (639) T ss_pred HHHHHHHhhCceeeeccccCCCCccccccccccccCcccccccCCccchHHHHHHHHHHHHhhhcCCCCccceeeeeEee Confidence 888877777888777642211 122332222222 1222222 233332 Q ss_pred ---CCceEeecccCh-hhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHH-H-HHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 248 ---DLEEFTALEIKS-NVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQ-Q-ISGMYASALNRYLRPAISELEYK 321 (392) Q Consensus 248 ---~g~~~~~l~~~~-~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~-~-~~~~~~~~l~p~l~~i~~~l~~~ 321 (392) ..-+++.+.... -+.--+.+|+..+..+|...-|||+.|=+.++.+-+.. + ...-++..|+|.+..|+++|+.. T Consensus 313 p~E~l~~ikhl~f~~ei~e~aiktR~daI~RlA~glDi~pE~LLGl~d~NHWsAWqI~dedvrlHI~P~l~~icdAlT~~ 392 (639) T protein:vir:97 313 AAEHLEKVQHIKFGNEVTEVEIKTRIDAITRLAMGLDVSPERLLGMSKGNHWSAWAIGDEDVQLHIKPVMDLICQAIYND 392 (639) T ss_pred chHHhcCeeeeeecCchhHHHHhhHHHHHHHHHhccCCchhheeecccccceEEEEecccceeeecchhHHHHHHHHHhh Confidence 223455555433 22334789999999999999999996643355442221 1 12335678999999999999998 Q ss_pred hhh----hhcccchhh---hhcchH----HHHHHHHHHHhCCCcCHHHHHHHHHh---CCCCc---cc------------ Q lcl|Aclame:pro 322 LSD----HISVNMRPA---IDPLGD----NYLSTISTATRWGALAENQATFVLQE---AGYIP---KD------------ 372 (392) Q Consensus 322 l~~----~~~~d~~~~---~~~~~~----~~~~~~~~~~~~g~~T~nE~R~~l~~---~g~~~---~e------------ 372 (392) +++ ..++|-... ++.+.. .+...+..++..|.+|-.-.|+.|+. .|+.- .. T Consensus 393 ~Lrp~Le~eGvDp~kYvvW~DaS~Lt~dPd~~deA~qa~drGAIt~eAlR~~lG~~edd~yd~~t~e~~~~~A~~~V~~~ 472 (639) T protein:vir:97 393 ILTPLLAREGIDPTKYILWYDASGLTSDPDLSDEAVEAHDRGAITSAALRRLLNVGEDSGYDLTTLDGCREFAADVVTKN 472 (639) T ss_pred HHHHHHHHhCCCHHHhEeeecCcccccCCCCcHHHHHHHHcCCccHHHHHHHhccccccCCCCCCcHHHHHHHHHHhcCC Confidence 764 334443321 121111 12345667788999999888888742 11210 00 Q ss_pred -------c----ccc--cCC--CCC--CC-----------CCCCCCCC Q lcl|Aclame:pro 373 -------L----PAP--ENT--NKK--TT-----------GQSNEPVP 392 (392) Q Consensus 373 -------~----~~~--e~~--~~~--~~-----------gd~~~p~p 392 (392) . |.. .++ ++. +. |+.+.|.| T Consensus 473 P~li~~~apl~~P~lq~~e~ptp~~a~~~a~~~~~~de~~ga~~~~eP 520 (639) T protein:vir:97 473 PELIAMYAPLLSSQLAGIEFPQPANAIESTREDEEDDEDSGARQQREP 520 (639) T ss_pred cchhhhhhhccCccceecccCCCCCCCCCCCCCCCcccccCCCCCcCC Confidence 0 110 111 111 11 12222344 No 171 >protein:vir:78537 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1853 # MgeName: U2 # Cross-refs: genbank:acc:YP_001491582;genbank:gi:157786405;genbank:GeneID:5625689 Probab=97.88 E-value=1.3e-05 Score=47.40 Aligned_cols=369 Identities=12% Similarity=0.068 Sum_probs=149.8 Q ss_pred chh--------hHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhh---hhcchHHHHHHHHHHHhhhhCc Q lcl|Aclame:pro 3 LPI--------LNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARA---ALRNSDLFSIILQLSSDLAIVK 71 (392) Q Consensus 3 Mg~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---a~~~~~v~~~i~~ia~~ia~~p 71 (392) |+- .+.+.+....-. .... +..+... + ...+..+..+. -+......-+|+..++.+---. T Consensus 1 ~~t~~d~i~~L~~~~~~~~~r~~--~~~~-Yy~G~~~-----i-~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g 71 (480) T protein:vir:78 1 MTTYHEHVERLQGLLARDLPNLL--EAEA-YRNGTRR-----L-KTIGIGAPPELAYLDVQPGWVATYLRTLSDRLDIEG 71 (480) T ss_pred CCCHHHHHHHHHHHHHHHHHHHH--HHHH-HHhcccc-----c-hhcccccchhhhhhhhhcchHHHHHHHHHhhhccCc Confidence 321 111111110000 0000 0001000 0 00000111100 0011122335555555442223 Q ss_pred eeeeccc-cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEee------ccCCceEEEEEeccccceeeecCcc-c-e Q lcl|Aclame:pro 72 INAEKKK-NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR------NANGADMKWEYLRPSQVNTYYFEYE-N-G 142 (392) Q Consensus 72 ~~~~~~~-~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r------~~~G~~~~l~~l~~~~v~~~~~~~~-~-~ 142 (392) +.+-..+ ....+.+-...-........+..+.+.+|.||..+.+ +.+|.+ .+.+++|..+.+.++... + . T Consensus 72 ~~~~~d~~~~~~l~~i~~~N~~~~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~~~~-~i~~~~p~~~~~i~D~~~~~~~ 150 (480) T protein:vir:78 72 FRISEDSEGLEELWNWWQANDLDEESVLGHDDSLTFGRAYITVSHPDVESGDPAGIP-LIRVESPLYMYAELDPRNTRRV 150 (480) T ss_pred eecCCCchhHHHHHHHHHhcCHHHHHHHHHHHHhhcCceEEEeecCccccCCCCCee-EEEEEcccceEEEEcCCCccce Confidence 3222111 1111111111112334456788999999999988764 345655 367888888888776432 1 1 Q ss_pred EE-EEEEe--cC-cceeee-----------------------------EEEeceeEEEecCCCcccccccCCHHHH-HHH Q lcl|Aclame:pro 143 MY-YNITF--DD-PKIEPI-----------------------------LQAPQSDLIHMKLLSIDGGKTGISPLYS-LRR 188 (392) Q Consensus 143 ~~-~~~~~--~~-~~~~~~-----------------------------~~~~~~~vih~~~~~~~~~~~G~s~~~~-~~~ 188 (392) .+ ..+.. ++ ...... ..+..-.|+|+.++...+..+|.|.+.. +.. T Consensus 151 ~~~i~~~~~~d~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~sdi~~~i~~ 230 (480) T protein:vir:78 151 TRAVRLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGRSEISPELRK 230 (480) T ss_pred EEEEEEEEeecCCcceEEEEEEeCCeEEEEEecCCCcccccccccccccCCCCcceEEeecccccCCccCccchhHHHHH Confidence 11 11100 00 000000 1122234566665554455668886653 334 Q ss_pred HHHHHHHHHHHHHHHHHcCCCcceEEEeCC-CCCchHHHHHHHHHHHhccccCCceeecc-CCceEeecccChhhHHHHH Q lcl|Aclame:pro 189 ESKIQRASDRLTISSLNSSLNVPGVLTVKG-GGLLSDKDKASRSRSFMKRSRSGGPVVLD-DLEEFTALEIKSNVAQLLS 266 (392) Q Consensus 189 ~i~~~~~~~~~~~~~~~ng~~~~~il~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~vl~-~g~~~~~l~~~~~d~~~~e 266 (392) .++....+.....+...-.+.|-.++..-. .....+.....+ .. ..+.++.++ ++.+|.++....-+ .+++ T Consensus 231 l~Da~~~~~s~~~~~~~~~a~p~~~i~G~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 303 (480) T protein:vir:78 231 VTDAASRTLMNLQSASQILGTPLRVISGVTTDELTNDGENTTL-DI-----YYGRILTLASEAAKISEFKAAELR-NFAE 303 (480) T ss_pred HHHHHHHHHHHHHHHHHhhcchhhhhhCCCccccccccccchh-hh-----hhhhhccCCCCCceEEecCccCHH-HHHH Confidence 444433333332233332333443333111 000011101111 11 123344444 45677766654322 3788 Q ss_pred HHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----------h-------hcc Q lcl|Aclame:pro 267 QTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD-----------H-------ISV 328 (392) Q Consensus 267 ~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~-----------~-------~~~ 328 (392) ..+..+.+|+..-++|++.+|+.+.+.++..+.+.. ...+.-.+...+..|...|-. . +++ T Consensus 304 ~l~~~i~~~~~~~~~p~~~fg~~~~n~~Sg~Al~~~-~~~l~~k~~~~~~~f~~~l~~~~rl~~~~~~~~~~~~~~~i~v 382 (480) T protein:vir:78 304 EMEVFRKEAASITGLPPQYLSSSSENPASAEAIIAT-DSRIVKMAERKGRIFGGAWERAMRIAMQIMGREVTEEYTRLET 382 (480) T ss_pred HHHHHHHHHhcccCCCHHHhccccCchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeE Confidence 888899999999999999998754433333333322 222333333333333322211 0 111 Q ss_pred cchhhhhcchHHHHHHHHHHHhCC--CcCHHHHHHHHHhCCCCcccccccc------------CCC-CCCCCCCCCCCC Q lcl|Aclame:pro 329 NMRPAIDPLGDNYLSTISTATRWG--ALAENQATFVLQEAGYIPKDLPAPE------------NTN-KKTTGQSNEPVP 392 (392) Q Consensus 329 d~~~~~~~~~~~~~~~~~~~~~~g--~~T~nE~R~~l~~~g~~~~e~~~~e------------~~~-~~~~gd~~~p~p 392 (392) .+..-...+..+.+..+.+++.+| +++..-++++| |+.++++.+++ .+. +..+.-+.+|.| T Consensus 383 ~w~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~l---g~~~d~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (480) T protein:vir:78 383 VWRDPSTPTVAAKADAVSKLYANGQGPIPKEQARIDL---GYTATQREQMRDWDKQETEDMIDTLYSTTKAQADATPKP 458 (480) T ss_pred EecCCCCCCHHHHHHHHHHHHHhcccCCCHHHHHhcC---CCCHhHHHHHHHHHHHHHHHHHHHhhccccCCCccccCC Confidence 111112234455666777777765 56665556554 66654322111 011 111111112222 No 172 >protein:vir:2732 Length: 501 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:58 # MgeName: O1205 # Cross-refs: genbank:acc:NP_695105;genbank:gi:23455874;genbank:GeneID:955614 Probab=97.86 E-value=1.4e-05 Score=47.16 Aligned_cols=380 Identities=13% Similarity=0.082 Sum_probs=165.1 Q ss_pred Ccch---hhHhhcccccc--cccccccccccccchhhhhh-hhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceee Q lcl|Aclame:pro 1 MILP---ILNFINQTNDP--PEVGSVQSYFPDGNDAQIME-SLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINA 74 (392) Q Consensus 1 m~Mg---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~ 74 (392) +... +.+++...... +.-.....+. .+....... .-...... +..-+.++...-+|+..++-+-.-|+++ T Consensus 37 ~~~~~~~l~~~i~~~~~~~~~r~~~l~~yY-~g~~~~i~~~~~~~~~~~---~~~ki~~n~~k~Ivd~~~~yl~g~p~~~ 112 (501) T protein:vir:27 37 MVNNWELLKNFINHHKLRQAPRIQELLDYA-RGENHDVLQFGRRKDREM---ADKRAVHNYGRMISKFKTGYLAGNPIRV 112 (501) T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCccccccCccCcccc---ccceeccchHHHHHHHHhhhhcccCeeE Confidence 1111 11221111000 0000000000 000000000 00000000 0011223444556677666665556655 Q ss_pred ecccc--c----cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCcc-c-eEE-E Q lcl|Aclame:pro 75 EKKKN--Q----GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE-N-GMY-Y 145 (392) Q Consensus 75 ~~~~~--~----~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~-~-~~~-~ 145 (392) .-.+. . ..+.+=...-........+..+++.+|.+|.++.++.+|++. +..++|..+.+..+... + ..+ . T Consensus 113 ~~~d~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~vy~ded~~~~-i~~~~p~~~~~v~d~~~~~~~~~~i 191 (501) T protein:vir:27 113 EYDDNDNNSQNDDTIKRIGRINDIDSHNRTLIRDLSQTGRAYEVIYRNEYDETR-IKRLNPLETFVIYDNSLEDNSIAAV 191 (501) T ss_pred ecCCccchHHHHHHHHHHHHhcChhHHHHHHHHHHhhCCeEEEEEEeCCCCceE-EEEEccceeEEEecCCCCCceEEEE Confidence 43221 1 111111112234456677889999999999999999888764 67788888887776532 2 111 1 Q ss_pred EE-Ee--cCcceeeeEEEeceeEEEecCC----------C---------cccccccCCHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 146 NI-TF--DDPKIEPILQAPQSDLIHMKLL----------S---------IDGGKTGISPLYSLRRESKIQRASDRLTISS 203 (392) Q Consensus 146 ~~-~~--~~~~~~~~~~~~~~~vih~~~~----------~---------~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~ 203 (392) ++ .. ..........+.++.+.++... + ......|.|.+..+...++....+.....+. T Consensus 192 r~~~~~~~~~~~~~~~vyt~~~v~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~d~~~S~~~~~ 271 (501) T protein:vir:27 192 RYYNRGTLQNAKDVVEIYTNEHIYTLDASDDFNEISVTTHAFGTVPITEFLNNVDGIGDYETELYLIDLYDSAESDTANH 271 (501) T ss_pred EEEEeeecCCcEEEEEEEeCCeEEEEEeCCceeeccccccCCCcccEEEecCCCCCCCchhhhHHHHHHHHHHHHHHHHH Confidence 11 11 1111111112223333222110 0 0012357888888888888777777666666 Q ss_pred HHcCCCcceEEEeCCCCCchHHHHHHHHH-HHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhccc Q lcl|Aclame:pro 204 LNSSLNVPGVLTVKGGGLLSDKDKASRSR-SFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLP 282 (392) Q Consensus 204 ~~ng~~~~~il~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP 282 (392) +.....|-.++.........+. ...... ........+.....+++.+++-++....+..+....+...+.|+..-++| T Consensus 272 ~~~~~~~~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p 350 (501) T protein:vir:27 272 MSDMADAILAIYGDLALPKGMQ-ASDMKRTRLMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAYKTRLNRDIHIFTNIP 350 (501) T ss_pred HHHhcCceeeeecCccCCcccc-hhhhhhcCceeecccccccCCCCCcceeeeeccCCHHHHHHHHHHHHHHHHHHhCCc Confidence 6666666655554322222211 111111 11111122222234455566666655555566777888889999999999 Q ss_pred HHHcCCcccccchHHHHH--------------HHHHHHHHHHHHHHHHHHHHHhh------hhhcccchhhhhcchHHHH Q lcl|Aclame:pro 283 DSYIGGQGDQQSSIQQIS--------------GMYASALNRYLRPAISELEYKLS------DHISVNMRPAIDPLGDNYL 342 (392) Q Consensus 283 ~~~lg~~~~~~~~~~~~~--------------~~~~~~l~p~l~~i~~~l~~~l~------~~~~~d~~~~~~~~~~~~~ 342 (392) ....+..+. +.+..+.+ ..+...+...++.+.+.++..-. ..+++.+...+..+..+.+ T Consensus 351 ~~~~~~~~~-n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~v~f~~~~p~n~~e~a 429 (501) T protein:vir:27 351 DMSDTNFSG-NTSGEALKYKLFGLDQDRVDTQSQFTQGLKRRYRLAARIGSLVNEFKDFDESLLKITFTPNLPKSLNEQV 429 (501) T ss_pred ccCcccccc-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccceEEeCCCCCcCHHHHH Confidence 765543222 22222222 12222222222222222221100 0122222233333455556 Q ss_pred HHHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccc-----------------------cccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 343 STISTATRWGALAENQATFVLQEAGYIPK---DLP-----------------------APENTNKKTTGQSNEPVP 392 (392) Q Consensus 343 ~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~-----------------------~~e~~~~~~~gd~~~p~p 392 (392) ..+.++ .|+++..-+.+++ |+..+ |+. ...+..+-.++|+.+.++ T Consensus 430 d~~~kl--~g~iS~et~l~~l---~~v~D~~~E~eri~~E~~e~~~~~~~~~~~~~~~~~~d~~~~~~~d~~e~~~ 500 (501) T protein:vir:27 430 SILTGL--GGQVSQETALSLS---GLVESPNEELDKINKEVSEIDFKGYSNDFNEHVGKYTDEVKETHTDDFERAY 500 (501) T ss_pred HHHHHH--hccCcHHHHHHhC---CCCCCHHHHHHHHHHHHHhhhHhhhcCccccccccccCCCCCCccccccccC Confidence 666655 5677765555443 33211 111 111112234456666666 No 173 >protein:vir:1587 Length: 508 # NCBI annotation: minor capsid protein # Family: family:all:898 # MgeID: mge:32 # MgeName: phig1e # Cross-refs: genbank:acc:NP_695169;swissprot:trembl:o03928;genbank:gi:23455800;interpro:IPR006432;uniprot:O03928;genbank:GeneID:955566 Probab=97.84 E-value=1.5e-05 Score=46.98 Aligned_cols=376 Identities=10% Similarity=0.057 Sum_probs=162.5 Q ss_pred chhhHhhccccc--------cccccccc--c-c-ccccc---hhhhhhhhcCCCC----cccc----hhhhhcchHHHHH Q lcl|Aclame:pro 3 LPILNFINQTND--------PPEVGSVQ--S-Y-FPDGN---DAQIMESLLGDNN----EWVS----ARAALRNSDLFSI 59 (392) Q Consensus 3 Mg~~~~~~~~~~--------~~~~~~~~--~-~-~~~~~---~~~~~~~~~~~~~----~~v~----~~~a~~~~~v~~~ 59 (392) ||+|.+++.... ........ . . .++.. ......++.+... .... .+.-.+......+ T Consensus 1 m~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ri~~~~~~y~g~~~~~~~~~~~~~~~~~~~~sln~~~~i 80 (508) T protein:vir:15 1 MGLIQRIKDLFWKGAAATGVTGSLSKITDDPRISIDPDEYVRIQTDLDYYSDKLQYIHYQASDGIKKKRLKNTINMAKTA 80 (508) T ss_pred CChHHHHHHHHHHHHHHhccccchHHhhcccccccCHHHHHHHHHHHHHhcCCCcccccccCCCCccccceeecchHHHH Confidence 666543332210 00000000 0 0 00000 0011122222110 0000 0111122333445 Q ss_pred HHHHHHhhhhCceeee--ccc-cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeee Q lcl|Aclame:pro 60 ILQLSSDLAIVKINAE--KKK-NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYY 136 (392) Q Consensus 60 i~~ia~~ia~~p~~~~--~~~-~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~ 136 (392) ++.+|+-+-.=|..+. ..+ .+..+.+=-..-....-.+..+.+.+..|.+++.+..+.. . ..+..++|..+-+.. T Consensus 81 ~~~~A~lv~~e~~~i~v~~~~~~~e~l~~il~~n~f~~~~~~~~e~a~a~G~~~~k~~~d~~-~-~~i~~v~ad~~~P~~ 158 (508) T protein:vir:15 81 ARRIASVVFNEKAEIHVKDNNEADKFLNDVLEDNDFKNKFEEALEKGVALGGFAMRPYIDGN-H-IKIAWVRADQFYPLQ 158 (508) T ss_pred HHHHHhhhhCCCceEEeCCchHHHHHHHHHHHhccHHHHHHHHHHHHhhcCceEEEEEEeCC-e-eEEEEEcCCeeEEEE Confidence 5555555533333332 221 1111111000111122234455666677888776665533 2 345556666554421 Q ss_pred cCcc------------------ceEEEEEEe----cCcc---------------eeeeEEE------------------e Q lcl|Aclame:pro 137 FEYE------------------NGMYYNITF----DDPK---------------IEPILQA------------------P 161 (392) Q Consensus 137 ~~~~------------------~~~~~~~~~----~~~~---------------~~~~~~~------------------~ 161 (392) .+.+ +.+|....+ +.+. .|..+.+ + T Consensus 159 ~d~~~~~~~af~~~~~~~~~~~~~~yt~lE~h~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~e~~~l~~~~~~~g~~ 238 (508) T protein:vir:15 159 SNTNDISEAAIASRTQRTESNQTKYYTLLEFHQWQDNGSYQITNELYKSDSPDIVGNQVPLSTLPVYKELAPQVTISGLQ 238 (508) T ss_pred EcCCCeEEEEEEEEEEeecCCCceEEEEEEEEEEecCcceEEEEEEEecCCchhcCcccchhhcccccCCCcceEecCCC Confidence 1111 111211000 0000 0111100 0 Q ss_pred ceeEEEecCCCcc----cccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhcc Q lcl|Aclame:pro 162 QSDLIHMKLLSID----GGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKR 237 (392) Q Consensus 162 ~~~vih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~ 237 (392) .--+.|++.+..+ +..+|+|.+..+...++..........+-|+. +++..++. ......+..... .+... T Consensus 239 ~p~f~y~~~~~~N~~~~~splG~S~~~~~~~lid~lD~~~s~~~~e~~~-~~~~i~v~--~~~l~~d~~~~~---~~~~~ 312 (508) T protein:vir:15 239 RPLFAYFKTPGANNINIESPLGLGVVDNAKHVLDDINDTHDQFIWEIRL-GQKHIAVQ--PGMLRFDDEHKP---TFDTE 312 (508) T ss_pred cceeEEecCCccccccCCCCcCCchHhhhHHHHHHHHHHHHHHHHHHHh-cccceeec--hHHhcCCCCCcc---ccCCC Confidence 0112344433221 34569999999999999888887777777754 44443331 111000000000 00000 Q ss_pred ccCCceee--ccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHH---HHHHHHHH Q lcl|Aclame:pro 238 SRSGGPVV--LDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYA---SALNRYLR 312 (392) Q Consensus 238 ~~~g~~~v--l~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~---~~l~p~l~ 312 (392) .+....+- -++|..++.++....+-++.+..+...+.|....|+++..+|...++..+..++..-.+ .++.-..+ T Consensus 313 ~~~~~~~~~~~~~~~~i~~~~~~ir~e~~~~~~~~~l~~~~~~~gls~~~f~~~~~~~~TAtei~s~~~~~~~t~~~~~~ 392 (508) T protein:vir:15 313 QNVYVGVLSDDNNGLGVKDMTTPIRTVQYKDAIDHFIKEFEVQIGLSTGTFSYSNDGVKTATEVVSNNSMTYQTRSSYLT 392 (508) T ss_pred CeeEEeccCCCCCCCceeEeecccChHHHHHHHHHHHHHHHHHhCCCchhcccccCccccHHHHHHHHHHHHHHHHHHHH Confidence 00000001 13455688888888888999999999999999999999999865444333333222211 22222233 Q ss_pred HHHHHHHHHh---h---h---------------------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHh Q lcl|Aclame:pro 313 PAISELEYKL---S---D---------------------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQE 365 (392) Q Consensus 313 ~i~~~l~~~l---~---~---------------------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~ 365 (392) .++.+|...+ + . .+.++...-+..|.++....+..++.+|++++.+++..+ T Consensus 393 ~~~~al~~lv~~il~l~~~~~~~~~g~~~~~~~~~~~~~~v~v~f~D~i~~d~~~~~~~~~~~v~aGi~s~e~~i~~~-- 470 (508) T protein:vir:15 393 MVEKAIDELCQSIFELANAGALFDDGKPLFTLDSASQPLDIECHFDDGVFVNKDKQLEEDAKVLAIGALSKQTFLQRN-- 470 (508) T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccccccccccCCcceEEEeCCCCCCCHHHHHHHHHHHHhcCCCCHHHHHHhc-- Confidence 3333332210 0 0 122333333445667777888899999999998877542 Q ss_pred CCCCccc----cccccC-----------CCCCCCCCCCC Q lcl|Aclame:pro 366 AGYIPKD----LPAPEN-----------TNKKTTGQSNE 389 (392) Q Consensus 366 ~g~~~~e----~~~~e~-----------~~~~~~gd~~~ 389 (392) -|+...+ ++++.. ..+. +|+.+| T Consensus 471 ~g~~deea~~el~ri~~E~~~~~~~~~~~~~~-~g~~ge 508 (508) T protein:vir:15 471 YGMTDEQAAEELAKIQSEAPTDTFEGGRSAIL-NGGDGE 508 (508) T ss_pred CCCChHHHHHHHHHHHHhccccCccccccccC-CCCCCC Confidence 4554432 221111 1222 333344 No 174 >protein:vir:79043 Length: 479 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1861 # MgeName: phiC2 # Cross-refs: genbank:acc:YP_001110721;genbank:gi:134287338;genbank:GeneID:4955217 Probab=97.84 E-value=1.6e-05 Score=46.92 Aligned_cols=364 Identities=11% Similarity=0.020 Sum_probs=161.6 Q ss_pred Ccch-------------hhHhhcccccccccc---cccccccccchhhhhh-hhcCCCCcccc----hhhhhcchHHHHH Q lcl|Aclame:pro 1 MILP-------------ILNFINQTNDPPEVG---SVQSYFPDGNDAQIME-SLLGDNNEWVS----ARAALRNSDLFSI 59 (392) Q Consensus 1 m~Mg-------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~v~----~~~a~~~~~v~~~ 59 (392) |.-. +...+.......... ...... .+...-... ......+.... +..-+.++-.... T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~yy-~g~~~i~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~I 85 (479) T protein:vir:79 7 SETDLIKVQLKKESTINLVKVIEHYILKHRPEKYKQGEEYY-YGNTDVNNKRRYYLLDGAKVDDFTKVNNKAINNYHKLL 85 (479) T ss_pred cccceEeeccccCChhHHHHHHHHHHhhhhHHHHHHHHHHh-ccCCcccccccccccccccccccccCcceeecchHHHH Confidence 1111 222222211111000 000000 010000000 00000000000 0001223444556 Q ss_pred HHHHHHhhhhCceeeecccc--cccccc--CCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceee Q lcl|Aclame:pro 60 ILQLSSDLAIVKINAEKKKN--QGIIDN--PSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTY 135 (392) Q Consensus 60 i~~ia~~ia~~p~~~~~~~~--~~~~~~--PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~ 135 (392) |+..++-+-.-|+.+--.+. ...+.. =| ........+....+.+|.+|.++..+.+|++. +..++|..+.+. T Consensus 86 vd~~~~~l~g~p~~~~~~~~~~~~~~~~~~~n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~~-i~~~~p~~~~~v 161 (479) T protein:vir:79 86 VDQKVGYSVGNPIVFNADDDNLTKLLNDLLGE---EFDDTITELYLNASNKGVEWLHPYINRKGEFK-YVIIPAEEAIPI 161 (479) T ss_pred HHHHHhhhhcCCceeccCCHHHHHHHHHHHhc---CHHHHHHHHHHHHHhcCeEEEEEEeCCCCceE-EEEEccceeEEE Confidence 67666666666665532221 111110 12 23444566778888999999999888888765 777888888877 Q ss_pred ecCccc--eEEE--EEEecC--c-ceeeeEEEeceeE------------------------------------------- Q lcl|Aclame:pro 136 YFEYEN--GMYY--NITFDD--P-KIEPILQAPQSDL------------------------------------------- 165 (392) Q Consensus 136 ~~~~~~--~~~~--~~~~~~--~-~~~~~~~~~~~~v------------------------------------------- 165 (392) .+.... .... .|.... + .......+.+..+ T Consensus 162 ~d~~~~~~~~~~ir~y~~~~~~~~~~~~~e~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP 241 (479) T protein:vir:79 162 WDSKRQRELVAFIRFYYIEDIDGNKIKRVEYYTENDITYFIERGNSFIQEFLYDEYGKMTDIQEGHFRINNKEQGWGKVP 241 (479) T ss_pred EeCCCCCceEEEEEEEEEeecCCceEEEEEEEeCCcEEEEEecCCcccccccccccccccccccccccccccccCCCccc Confidence 654321 1111 111111 0 0111112223333 Q ss_pred -EEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCcee Q lcl|Aclame:pro 166 -IHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPV 244 (392) Q Consensus 166 -ih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 244 (392) ++++++ ..|.|.+..+...++....+.....+.++..+.|-.+++.-... ..++... ....++++ T Consensus 242 vv~~~nn-----~~g~sd~~~v~~liDa~d~~~S~~~~~~~~~~~~~~v~~g~~~~-~~~~~~~--------~~~~~~~i 307 (479) T protein:vir:79 242 FIPFKNN-----EKCVSDLTFYKSLIDIYDNNISTLADNLDEIQEVIYVLKEYPGT-SLQEFID--------NIRYYKSI 307 (479) T ss_pred EEEecCC-----CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCcc-ccccchh--------hhhhccce Confidence 333321 24778888887777777766666666666666676665532211 1111111 11233556 Q ss_pred eccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHH--------------HHHHHHHHH Q lcl|Aclame:pro 245 VLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISG--------------MYASALNRY 310 (392) Q Consensus 245 vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~--------------~~~~~l~p~ 310 (392) .++++.+++-+..+..+..+.+..+...+.|...-++|..-.+.. ++.+..+.+. .+...+... T Consensus 308 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~--gn~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~ 385 (479) T protein:vir:79 308 KVDGGGGVDKLEINIPVEAKKELLDRLEKNIIIFGQGVNPESQNT--GDKSGVALKFLYSLLDLKCSKTEKKFKKAIREL 385 (479) T ss_pred ecCCCCcceEEeccCCHHHHHHHHHHHHHHHHHHhCccccccccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 666666666555555555667778888888988888887644432 2222223222 222223333 Q ss_pred HHHHHHHHHHHhh-----hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccccc----- Q lcl|Aclame:pro 311 LRPAISELEYKLS-----DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAPE----- 377 (392) Q Consensus 311 l~~i~~~l~~~l~-----~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~e----- 377 (392) ++.+.+.+...-. ..+++.+..-+..+..+.+..+..+ .|+++...+.+++ |+.++ |+.++. T Consensus 386 ~~li~~~~~~~~~~~~~~~~i~i~f~~~~p~~~~~~a~~~~kl--~g~iS~et~l~~l---~~v~d~~~E~~ri~~E~~~ 460 (479) T protein:vir:79 386 LWFVCEYLKISGNKSYDYKTVQITFNHSMIINEAEKIDMAAKS--TGIVSDETIVSNH---PWVEDVNDELERLKKQEDT 460 (479) T ss_pred HHHHHHHHhccCCCccccccceEEeCCCCCcCHHHHHHHHHHH--hccCcHHHHHHhC---CCCCCHHHHHHHHHHHHHH Confidence 3322222221110 1122222333334555666666665 5888887776655 54332 222211 Q ss_pred ---CCCCCCCCCCCCCCC Q lcl|Aclame:pro 378 ---NTNKKTTGQSNEPVP 392 (392) Q Consensus 378 ---~~~~~~~gd~~~p~p 392 (392) ..... ++..++.+ T Consensus 461 ~~~~~~~~--~~~~~~~~ 476 (479) T protein:vir:79 461 QKEYDDLI--PNNQDGVI 476 (479) T ss_pred HHHHHhcc--CcccCCCc Confidence 01111 11222222 No 175 >protein:vir:78227 Length: 480 # NCBI annotation: gp11 # Family: family:all:524 # MgeID: mge:1849 # MgeName: Bethlehem # Cross-refs: genbank:acc:YP_001491663;genbank:gi:157786487;genbank:GeneID:5625705 Probab=97.83 E-value=1.6e-05 Score=46.83 Aligned_cols=370 Identities=12% Similarity=0.068 Sum_probs=148.7 Q ss_pred chh--------hHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhh---hcchHHHHHHHHHHHhhhhCc Q lcl|Aclame:pro 3 LPI--------LNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAA---LRNSDLFSIILQLSSDLAIVK 71 (392) Q Consensus 3 Mg~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a---~~~~~v~~~i~~ia~~ia~~p 71 (392) |+- .+.+.+....-. .... +..+.. .+ ...+..+..+.. +.......+|+..++.+--.. T Consensus 1 ~~t~~~~i~~L~~~~~~~~~r~~--~l~~-Yy~G~~-----~i-~~~~~~~~~~~~~~~~~~n~~~~ivd~~~~~l~~~g 71 (480) T protein:vir:78 1 MTTYHEHVERLQGLLARDLPNLL--EAEA-YRNGTR-----RL-KTIGIGAPPELAYLDVQPGWVATYLRTLSDRLDIEG 71 (480) T ss_pred CCCHHHHHHHHHHHHHHHHHHHH--HHHH-HHhccc-----cc-cccccccchhHhhhhhhcchHHHHHHHHHhhhccCc Confidence 321 122111110000 0000 000000 00 000111111100 111122345555555443233 Q ss_pred eeeeccc-cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEee------ccCCceEEEEEeccccceeeecCc-c-ce Q lcl|Aclame:pro 72 INAEKKK-NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR------NANGADMKWEYLRPSQVNTYYFEY-E-NG 142 (392) Q Consensus 72 ~~~~~~~-~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r------~~~G~~~~l~~l~~~~v~~~~~~~-~-~~ 142 (392) +.+-... ....+.+-...-........+..+.+.+|.||.++.+ +.+|.+. +.+++|..+.+.++.. . .. T Consensus 72 ~~~~~d~~~~~~l~~i~~~N~~d~~~~~~~~~a~~~G~ay~~v~~~~~~~~d~~g~~~-i~~~~p~~~~~~~D~~~~~~~ 150 (480) T protein:vir:78 72 FRISEDSEGLEELWNWWQANDLDEESVLGHDDSLTFGRSYITVSHPDVESGDPAGIPL-IRVESPLYMYAELDPRNTRRV 150 (480) T ss_pred eecCCCchhHHHHHHHHHhcCHHHHHHHHHHHHhhcCceEEEEecCccccCCCCCeeE-EEEEcccceEEEEcCCCccce Confidence 3322211 1111111111112234556788899999999998865 3455554 6678888888777642 1 11 Q ss_pred EE-EEEEe--cC-cceee-----------------------------eEEEeceeEEEecCCCcccccccCCHHHH-HHH Q lcl|Aclame:pro 143 MY-YNITF--DD-PKIEP-----------------------------ILQAPQSDLIHMKLLSIDGGKTGISPLYS-LRR 188 (392) Q Consensus 143 ~~-~~~~~--~~-~~~~~-----------------------------~~~~~~~~vih~~~~~~~~~~~G~s~~~~-~~~ 188 (392) .+ ..++. ++ +.... ...+..-.|+|+.++...+..+|.|.+.. +.. T Consensus 151 ~~~i~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~f~n~~~~~~~~G~s~i~~~v~~ 230 (480) T protein:vir:78 151 TRAVRLYTTRDDVAVPDRATLYLPDETVPLRRNGGLNDQWVVDGDVIKHGLGVVPVVPLTNDPRLGNRYGRSEISPELRK 230 (480) T ss_pred EEEEEEEEeecCCCceEEEEEEeCCeEEEEEecCCCccccccccccccCCCCCcceEEeecccccCCccCcccchhhHHH Confidence 11 01000 00 00000 01122335566665544455678886653 344 Q ss_pred HHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeecc-CCceEeecccChhhHHHHHH Q lcl|Aclame:pro 189 ESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLD-DLEEFTALEIKSNVAQLLSQ 267 (392) Q Consensus 189 ~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~-~g~~~~~l~~~~~d~~~~e~ 267 (392) .++....+.....+..+-.+.|-.++.........+......... ..+.++.++ ++.+|.++....-+ .+++. T Consensus 231 l~Da~~~~~s~~~~~~~~~a~p~~~i~G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 304 (480) T protein:vir:78 231 VTDAASRTLMNLQSASQILGTPLRVISGVTTDELTNDGENTTLDI-----YYGRILTLASEAAKISEFKAAELR-NFAEE 304 (480) T ss_pred HHHHHHHHHHHHHHHHHhhcchhhhhhcCCccccccccccchhhh-----hhhhhccCCCCCceEEecCccCHH-HHHHH Confidence 444433333332333332334443433111000001100011111 112334443 45677776653322 26788 Q ss_pred HHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------------------hhccc Q lcl|Aclame:pro 268 TDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD------------------HISVN 329 (392) Q Consensus 268 ~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~------------------~~~~d 329 (392) .+....+|+..=++|+..+|+.+.+.++..+.+..+ ..+.--+...+..|...|-. .+++. T Consensus 305 l~~~i~~~~~~~~~p~~~~g~~~~n~~Sg~Alk~~~-~~l~~ka~~~~~~f~~~l~~~~~l~~~~~g~~~~~~~~~i~v~ 383 (480) T protein:vir:78 305 MEVFRKEAASITGLPPQYLSSSSENPASAEAIIATD-SRIVKMAERKGRIFGGAWERAMRIAMQIMGREVTEEYTRLETV 383 (480) T ss_pred HHHHHHHHhcccCCChHHhccccCcchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceeeeEE Confidence 888889999999999999987544333444443222 22222233333333322211 01111 Q ss_pred chhhhhcchHHHHHHHHHHHhCC--CcCHHHHHHHHHhCCCCccccccccC------------CCCCCCCC--------- Q lcl|Aclame:pro 330 MRPAIDPLGDNYLSTISTATRWG--ALAENQATFVLQEAGYIPKDLPAPEN------------TNKKTTGQ--------- 386 (392) Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g--~~T~nE~R~~l~~~g~~~~e~~~~e~------------~~~~~~gd--------- 386 (392) +..-...+..+.+..+.+++.+| +++..-+++.+ |+.++++.+++. +.....++ T Consensus 384 f~~~~~~s~~~~ad~~~kl~~~g~~~~s~et~~~~l---g~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (480) T protein:vir:78 384 WRDPSTPTVAAKADAVSKLYANGQGPIPKEQARIDL---GYTATQREQMRDWDKQETEDMIDTLYSTTKAQADATPKPTV 460 (480) T ss_pred ecCCCCCCHHHHHHHHHHHHHhccccCCHHHHHhcC---CCCHhHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCC Confidence 11111234455666677777755 56665555544 665543222110 11110010 Q ss_pred -----CCCCCC Q lcl|Aclame:pro 387 -----SNEPVP 392 (392) Q Consensus 387 -----~~~p~p 392 (392) +.+..| T Consensus 461 ~~~~~~~~~~~ 471 (480) T protein:vir:78 461 TETKTETQTSP 471 (480) T ss_pred CCCCCcccccc Confidence 111112 No 176 >protein:vir:106639 Length: 481 # NCBI annotation: ORF003 # Family: family:all:125 # MgeID: mge:1557 # MgeName: 187 # Cross-refs: genbank:acc:YP_239490;genbank:gi:66395218;genbank:GeneID:4555793 Probab=97.81 E-value=1.7e-05 Score=46.70 Aligned_cols=380 Identities=9% Similarity=0.035 Sum_probs=155.9 Q ss_pred CcchhhHhhcccccccc--cccccccccccchh---------------hhhhhhcCCCCccc-----------chhhhhc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPE--VGSVQSYFPDGNDA---------------QIMESLLGDNNEWV-----------SARAALR 52 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~--~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~v-----------~~~~a~~ 52 (392) -.|+.++.++....-.. .............. .....+.+...... .+..-+. T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~yY~g~~~~i~~~~~~~~~~~~~~~~ki~ 83 (481) T protein:vir:10 4 YTINNINTKFSPLANDDFVVSDLAELLKEENLRNFISRHQTEQVPRLEMLESYYLNRNTDILAGERRLQKYGDKADHRAV 83 (481) T ss_pred EeeehhchhcccccCceeeeecchhhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCccccccccccccceee Confidence 12222222111110000 00000000000000 00000001000000 0001123 Q ss_pred chHHHHHHHHHHHhhhhCceeeeccc--cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccc Q lcl|Aclame:pro 53 NSDLFSIILQLSSDLAIVKINAEKKK--NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPS 130 (392) Q Consensus 53 ~~~v~~~i~~ia~~ia~~p~~~~~~~--~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~ 130 (392) .+....+|+..++-+-.-|+.+.-.+ ....+.+-........+...+..+.+.+|.+|+.+..+.+|++. +..++|. T Consensus 84 ~n~~~~ivd~~~~~l~g~~~~~~~~d~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~~~~~~~~d~dg~~~-i~~~~p~ 162 (481) T protein:vir:10 84 HNYAKYVSRFIVGYLTGNPITITHQDNQTNDKIIELNDLNDADEVNSDLALNLSIYGRAYEIVYRDFEDRDT-FKVLDPK 162 (481) T ss_pred cchHHHHHHHHHhhhccCCceEecCChhHHHHHHHHHHhcChhHHHHHHHHHHHhcCeEEEEEEeCCCCeEE-EEEEccc Confidence 34455677777776666666543221 22222222222344566778899999999999999888899874 7788999 Q ss_pred cceeeecCccc--eEEE--EEEecCcce---eeeEEEeceeEEEecCCC-----------cc---------cccccCCHH Q lcl|Aclame:pro 131 QVNTYYFEYEN--GMYY--NITFDDPKI---EPILQAPQSDLIHMKLLS-----------ID---------GGKTGISPL 183 (392) Q Consensus 131 ~v~~~~~~~~~--~~~~--~~~~~~~~~---~~~~~~~~~~vih~~~~~-----------~~---------~~~~G~s~~ 183 (392) .+.+..+.... .... .+......+ .....+.+..+.|+.... .. ....|.|.+ T Consensus 163 ~~~~v~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~~~~ 242 (481) T protein:vir:10 163 STFVVYDQTLDKKVVAGVRYFEKQDKDKVPVQHVEVYTTDKIYYIEIKGGTYHRVEEVEHYYNDVPIIEYLNDQFKQGDF 242 (481) T ss_pred ceEEEEcCCCCCceEEEEEEEEEeeCCCceEEEEEEEecCeEEEEEecCCceeecccccccCCceeEEEeecCCCCCCch Confidence 88877765432 1111 111111110 111123444444432110 00 113477777 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHH-HHhccccCCceeeccCCceEeecccChhhH Q lcl|Aclame:pro 184 YSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSR-SFMKRSRSGGPVVLDDLEEFTALEIKSNVA 262 (392) Q Consensus 184 ~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~ 262 (392) ..+...++.......-..+.+.-.+.|-.++...... .++....+.. ..............+++.+++-+....... T Consensus 243 ~~v~~lida~~~~~s~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 320 (481) T protein:vir:10 243 ENVIALIDLYDSAQSDTANYMTDLNDAMLAIIGNVDL--DSEDAKAFRDANMIHLEPGTNANGSEGKAEVKYVYKQYDVA 320 (481) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCceeEeecCcCC--CccchhhhhhccceeccccccccCCCCCcceeEEeecCCHH Confidence 7666666655554444444444445565555432111 1111111111 000000000011122344444444444556 Q ss_pred HHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------hh--- Q lcl|Aclame:pro 263 QLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKL---------------SD--- 324 (392) Q Consensus 263 ~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l---------------~~--- 324 (392) .+.+..+...+.|+..-++|....+..+. +.+..+.+..+. .+.-.+...+..|...| .. T Consensus 321 ~~~~~~~~l~~~i~~~s~~p~~~~~~~~~-n~Sg~Al~~~~~-~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~ 398 (481) T protein:vir:10 321 GVEAYKKRLQNDIHKYTNTPDLNDEQFSG-VQSGESMKYKLF-GLEQVRAIKERLFKKGLMKRYKLLLNNVNLTGLKQHN 398 (481) T ss_pred HHHHHHHHHHHHHHHHhCCcccccccccc-ccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccc Confidence 67788888899999999999877664322 222233322111 11111211111111111 00 Q ss_pred --hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccccC-----------------CCCC Q lcl|Aclame:pro 325 --HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAPEN-----------------TNKK 382 (392) Q Consensus 325 --~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~e~-----------------~~~~ 382 (392) .+++.+..-...+..+.+..+..+ .|+++...+.++| |+..+ |+.++.. .+.- T Consensus 399 ~~~i~v~f~~~~~~~~~~~a~~~~kl--~g~is~et~~~~l---~~i~d~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~ 473 (481) T protein:vir:10 399 YAELTITFTPNLPKSMMESINAFNAL--SGGVSESTRLSLL---DFIDNPKEELEKMQEEEAQREKQADKRGYGEAFENH 473 (481) T ss_pred cceeeEEeCCCCCcCHHHHHHHHHHH--hccCChHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhhhhhccCCccCCCC Confidence 122222233334555666666665 4778876665544 44321 2211100 0000 Q ss_pred CCCCCCCC Q lcl|Aclame:pro 383 TTGQSNEP 390 (392) Q Consensus 383 ~~gd~~~p 390 (392) ...|+.+. T Consensus 474 ~~~dd~~g 481 (481) T protein:vir:10 474 LNVDDSNG 481 (481) T ss_pred CCCCCCCC Confidence 01111111 No 177 >protein:vir:733 Length: 453 # NCBI annotation: minor structural protein 1 # Family: family:all:125 # MgeID: mge:14 # MgeName: Tuc2009 # Cross-refs: genbank:acc:NP_108710;genbank:gi:13487832;genbank:GeneID:920851 Probab=97.80 E-value=1.8e-05 Score=46.58 Aligned_cols=379 Identities=12% Similarity=-0.007 Sum_probs=155.8 Q ss_pred Ccch--------hh-Hhhccccccccc-ccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhC Q lcl|Aclame:pro 1 MILP--------IL-NFINQTNDPPEV-GSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIV 70 (392) Q Consensus 1 m~Mg--------~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~ 70 (392) |-|. .+ ++++.......+ .....+ ..+.. .+........+.. ..-+..+.....|+..++-+-.- T Consensus 9 ~~~~~~~~~~~~~i~~~i~~~~~~~~r~~~~~~y-y~g~~-~i~~~~~~~~~~~---~~ki~~n~~~~ivd~~~~~l~g~ 83 (453) T protein:vir:73 9 MTYSRDEEITDKVVNDFMKKHQEEVERYEYLGNM-YKGIM-EISSQKAKDSWKP---DNRLTNNFAKYIVDTFVGYFNGI 83 (453) T ss_pred eeccccccCCHHHHHHHHHHHHHHHHHHHHHHHH-hcccc-chhcCCCCCccCc---cceeecchHHHHHHHhhhhhccc Confidence 1111 11 111111110000 000000 00100 0000000000000 00011233334455555544334 Q ss_pred ceeeeccc--cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccce-E-E-E Q lcl|Aclame:pro 71 KINAEKKK--NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENG-M-Y-Y 145 (392) Q Consensus 71 p~~~~~~~--~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~-~-~-~ 145 (392) |+.+--.+ ....+..-............+..+.+.+|.+|.++..+.+|.+. +..++|..+.+..++..+. . + . T Consensus 84 ~~~~~~~d~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~~-i~~~~p~~~~~v~dd~~~~~~~~~i 162 (453) T protein:vir:73 84 PIKKTHDDKSVLEAMQLFDNLNDMEDEESELAKIACVYGRAYELMYQNESTESE-VIYCSPLNVFMVYDDSIKQKPLFAV 162 (453) T ss_pred CceeecCChHHHHHHHHHHHhcChhHHHHHHHHHHHhcCeEEEEEEeCCCCceE-EEEEcccceEEEEeCCCCceeEEEE Confidence 54432221 11112211111233344567888899999999999998898874 6668888887776554322 1 1 1 Q ss_pred EEEecCcceeeeEEEeceeEEEecCCC--------------------cccccccCCHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 146 NITFDDPKIEPILQAPQSDLIHMKLLS--------------------IDGGKTGISPLYSLRRESKIQRASDRLTISSLN 205 (392) Q Consensus 146 ~~~~~~~~~~~~~~~~~~~vih~~~~~--------------------~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ 205 (392) ++.....+......+.+..++++.... ......|.|.+..+...++....+.....+..+ T Consensus 163 ~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~s~~~~v~~liDa~~~~~S~~~~~~~ 242 (453) T protein:vir:73 163 YYGFDEEGNLSGTVYTLLETISITGKAGEVKFGESTYNVYSDLPIVEYNFNEERQSIFEPVHSLINSYNKVTSEKANDVE 242 (453) T ss_pred EEEEecCceEEEEEEeCCeEEEEEecCCceEEccceeccCCceeEEEecCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH Confidence 112222111112223444444432110 001134778888777777776666655555555 Q ss_pred cCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHH Q lcl|Aclame:pro 206 SSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSY 285 (392) Q Consensus 206 ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~ 285 (392) ..+.|-.+++--..........+...-........+.....+.+.+++-+.....+..+....+...+.|+..-++|..- T Consensus 243 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~ 322 (453) T protein:vir:73 243 YFSDQYLVFLGAEVDEEDAKNIKDNRLINFFDKNSNGQGTNAAKVDVKFLDKPDSDVQTENLLNRLERSIFQFTMAANIS 322 (453) T ss_pred HhccceeeeecCCCCchhhhcccccccccccccccccccccccCceeEEeeecCCHHHHHHHHHHHHHHHHHHhCCcccC Confidence 66667666553211111111111110011111122223333455555555554455566777888888898888888643 Q ss_pred cCCcccccchHHHHHHH--------------HHHHHHHHHHHHHHHHHHHhh----hhhcccchhhhhcchHHHHHHHHH Q lcl|Aclame:pro 286 IGGQGDQQSSIQQISGM--------------YASALNRYLRPAISELEYKLS----DHISVNMRPAIDPLGDNYLSTIST 347 (392) Q Consensus 286 lg~~~~~~~~~~~~~~~--------------~~~~l~p~l~~i~~~l~~~l~----~~~~~d~~~~~~~~~~~~~~~~~~ 347 (392) .... ++.+..+.+.. +...+...++.+...+...-. ..+++.+..-+..+..+.+..+.+ T Consensus 323 ~~~~--gn~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~~~i~v~f~~~~p~~~~~~a~~~~k 400 (453) T protein:vir:73 323 DENF--GNSSGVALAYKLQAMSNLALSFQRKFQSALNRRYSLWSSLSTNASNKDAWKDIEYTFTRNEPKDIKEQAETANI 400 (453) T ss_pred cccc--cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccceEEeCCCCCCCHHHHHHHHHH Confidence 3221 22233333222 222222222222211111000 122333333333455666777766 Q ss_pred HHhCCCcCHHHHHHHHHhCCCCcc---ccccccCCC--CCCC-CCCCCCCC Q lcl|Aclame:pro 348 ATRWGALAENQATFVLQEAGYIPK---DLPAPENTN--KKTT-GQSNEPVP 392 (392) Q Consensus 348 ~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~e~~~--~~~~-gd~~~p~p 392 (392) +. |+++..-+.+++ |+.++ |+.+++... .... .+++--.| T Consensus 401 ~~--giis~et~~~~~---~~~~d~~~E~~ri~~E~~~~~~~~~~~~~~~~ 446 (453) T protein:vir:73 401 LK--GITSEETALSVI---SVIPDVQAEMEKIKKKKLLQLSLTRTSNLVRM 446 (453) T ss_pred Hh--ccCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHhccCCcc Confidence 64 788876555544 55432 222221100 0000 01111122 No 178 >protein:vir:95113 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1549 # MgeName: X2 # Cross-refs: genbank:acc:YP_240817;genbank:gi:66394677;genbank:GeneID:5133907 Probab=97.80 E-value=1.8e-05 Score=46.57 Aligned_cols=365 Identities=10% Similarity=0.016 Sum_probs=159.1 Q ss_pred hhHhhcccccccccccc----cccccccchh-----------------hhhhhhcCCC-----------Ccccc---hhh Q lcl|Aclame:pro 5 ILNFINQTNDPPEVGSV----QSYFPDGNDA-----------------QIMESLLGDN-----------NEWVS---ARA 49 (392) Q Consensus 5 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----------------~~~~~~~~~~-----------~~~v~---~~~ 49 (392) +|+.++.....+....+ .... ..... -....+.+.. +.... +.. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~i~~~~~~~~~~~~~~~Yy~g~~~i~~r~~~~~~~~~~~~~~~~~ 79 (474) T protein:vir:95 1 MFNIIRMPWDKPYGEEVVEQLKPQF-ETQEEMIIRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVYGNIDYDKPDW 79 (474) T ss_pred CcceeecCCCCchhhHHHHhhhhcc-CChHHHHHHHHHHHHHHHHHHHHHHHHhcccCchhccccccccccccccccccc Confidence 23333333221111000 0000 00000 0000000000 00000 001 Q ss_pred hhcchHHHHHHHHHHHhhhhCceeeeccccc------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEE Q lcl|Aclame:pro 50 ALRNSDLFSIILQLSSDLAIVKINAEKKKNQ------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMK 123 (392) Q Consensus 50 a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~ 123 (392) -+.++-...+++..++-+-.-|+++.-.+.. .++. |. .......+......+|.+|.++..+.+|++. T Consensus 80 ki~~n~~~~Ivd~~~~~l~g~p~~~~~~d~~~~~~l~~~~~--n~---~~~~~~e~~~~~~~~G~~~~~v~~d~~~~~~- 153 (474) T protein:vir:95 80 RITTNFHQNLVDQKVSYVASKPVTYSCEDESVLKIIHDVLD--TR---WDNKLIDILTATSNKGIDWLQVYINENGEMK- 153 (474) T ss_pred eeccchHHHHHHHHHhhhccCCceeccCchHHHHHHHHHHh--cc---HHHHHHHHHHHHhhcCcEEEEEEecCCCceE- Confidence 1123334456666666665566654332221 1111 22 3333456778888999999999888888764 Q ss_pred EEEeccccceeeecCcc-ce-EEEEEEecCcceeeeEEEeceeEEEecCCC---------------------c------- Q lcl|Aclame:pro 124 WEYLRPSQVNTYYFEYE-NG-MYYNITFDDPKIEPILQAPQSDLIHMKLLS---------------------I------- 173 (392) Q Consensus 124 l~~l~~~~v~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~vih~~~~~---------------------~------- 173 (392) +..++|..+-+..+... +. ......+..........+....+.++.... . T Consensus 154 i~~~~p~~~~~v~d~~~~~~~~~~i~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv 233 (474) T protein:vir:95 154 LFRVPAEQAIPIWVDKEREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHIQSHFSNGNWGRVPFI 233 (474) T ss_pred EEEEcccceEEEEcCCCCCceEEEEEEEEEcCeeEEEEEeCCeEEEEEEcCCccccccccCcccccccccccCCCccceE Confidence 67788888887765431 21 111111111111111223333333321100 0 Q ss_pred --ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCce Q lcl|Aclame:pro 174 --DGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEE 251 (392) Q Consensus 174 --~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~ 251 (392) .....|.|.+..+...++....+.....+.++....|-.++.--.. .+.+..... ....+++.++++.+ T Consensus 234 ~~~nn~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~~-~~~~~~~~~--------~~~~~~i~~~~~~~ 304 (474) T protein:vir:95 234 AFKNNPEEVSDIWMYKSLIDAIDKRLSDAQNMFDESVELIYILKGYEG-QDLEEFMRG--------LKYYKAINVDGDGG 304 (474) T ss_pred eecCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCc-ccchhhhhh--------hhccceeeccCCCc Confidence 0113478888888777777776665555666666667555543211 111111111 12345666777666 Q ss_pred EeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHH--------------HHHHHHHHHHHHHHH Q lcl|Aclame:pro 252 FTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGM--------------YASALNRYLRPAISE 317 (392) Q Consensus 252 ~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~--------------~~~~l~p~l~~i~~~ 317 (392) ++.+..+.....+.+..+...+.|+..-++|..-.+..+ ++.+..+.+.. +...+...++.|.+. T Consensus 305 ~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~-~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~ 383 (474) T protein:vir:95 305 VETIQVEVPVSSTKEYIDLMRAYIMEFGQGVDFQTDKFG-SAPSGIALKFLYGNLDLKANKLKNKATVAIQELIGFIIDF 383 (474) T ss_pred eeEEeecCCHHHHHHHHHHHHHHHHHHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 666665556666778888889999999999964332221 22222233222 222222222222221 Q ss_pred HHHHhh-hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc--------cCCCCCCCC Q lcl|Aclame:pro 318 LEYKLS-DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAP--------ENTNKKTTG 385 (392) Q Consensus 318 l~~~l~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~--------e~~~~~~~g 385 (392) +..+.. ..+.+.... .......+.++.+.++|+++...+.+++ |+.++ ++.++ ........+ T Consensus 384 ~g~~~d~~~i~v~f~~---~~p~d~~e~a~~~~~~g~iS~et~i~~l---~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~ 457 (474) T protein:vir:95 384 NNLKMDVKDIEISFNF---NRMMNDAEQSQIIAQSQYLSRETLVKSS---PLVDDYKAELERIEQEQMEYNKQLPNLDDG 457 (474) T ss_pred hCCCcccceeeEEecc---CCCcCHHHHHHHHHhcCCCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhcccccccc Confidence 111100 011111111 2223344555667778999987776654 54332 22111 111111111 Q ss_pred CC------CCCCC Q lcl|Aclame:pro 386 QS------NEPVP 392 (392) Q Consensus 386 d~------~~p~p 392 (392) +. .++.+ T Consensus 458 ~~d~~~~~~~~~~ 470 (474) T protein:vir:95 458 GADGAQQQERSND 470 (474) T ss_pred cCCCCcCCCCCcc Confidence 11 11111 No 179 >protein:vir:93747 Length: 472 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1475 # MgeName: 55 # Cross-refs: genbank:acc:YP_240454;genbank:gi:66396119;genbank:GeneID:5133516 Probab=97.77 E-value=2.1e-05 Score=46.27 Aligned_cols=367 Identities=10% Similarity=0.018 Sum_probs=155.3 Q ss_pred Ccchhh----------Hhhcc----cccccccc-cccccccccchhhhhh---hhcCCCCcccchhhhhcchHHHHHHHH Q lcl|Aclame:pro 1 MILPIL----------NFINQ----TNDPPEVG-SVQSYFPDGNDAQIME---SLLGDNNEWVSARAALRNSDLFSIILQ 62 (392) Q Consensus 1 m~Mg~~----------~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~a~~~~~v~~~i~~ 62 (392) |.-.+| +.+.+ ......+- .... ...+...-... ..........-+..-+.++-...+|+. T Consensus 11 ~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~-YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri~~n~~~~ivd~ 89 (472) T protein:vir:93 11 IFDAIVRTNNKPETLEEMIVRYIKQHLEKLPEISIGQE-YYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQ 89 (472) T ss_pred hhhceeeecCchhhHHHHHHHHHHHHHHHHHHHHHHHH-HhccccccccccchhhccccccccccccccccchHHHHHHH Confidence 111111 11100 00000000 0000 00000000000 000000000000011123444556777 Q ss_pred HHHhhhhCceeeeccccc--ccccc--CCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecC Q lcl|Aclame:pro 63 LSSDLAIVKINAEKKKNQ--GIIDN--PSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFE 138 (392) Q Consensus 63 ia~~ia~~p~~~~~~~~~--~~~~~--PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~ 138 (392) .+.-+-.-|+.+...+.. ..+.. =|. .......+..+.+.+|.+|.++..+.+|++. +..++|..+.+.++. T Consensus 90 ~~~~l~g~~~~~~~~d~~~~~~l~~~~~n~---~~~~~~~~~~~~~~~G~~~~~v~~d~d~~~~-i~~~~p~~~~~i~d~ 165 (472) T protein:vir:93 90 KVSYIVGKPIAFKHTDDEVVKRIDEVLGNR---FDDKLHSVLTGASNKGIEWLHPYLDEEGEFK-LFRVPAEQGIPIWTD 165 (472) T ss_pred HhhhhcccCeeeccCChHHHHHHHHHHhcc---HHHHHHHHHHHHhhcCeEEEEEEECCCCceE-EEEEcccceEEEEcC Confidence 766665556554322211 11110 121 2233455778888999999999988888764 677899888887753 Q ss_pred c-cceE-EEEEEecCcceeeeEEEecee-----------------------------------EEEecCCCcccccccCC Q lcl|Aclame:pro 139 Y-ENGM-YYNITFDDPKIEPILQAPQSD-----------------------------------LIHMKLLSIDGGKTGIS 181 (392) Q Consensus 139 ~-~~~~-~~~~~~~~~~~~~~~~~~~~~-----------------------------------vih~~~~~~~~~~~G~s 181 (392) . .+.+ +....+..........+.... |++++++ ..|.| T Consensus 166 ~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn-----~~g~s 240 (472) T protein:vir:93 166 KEHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNN-----DLEIS 240 (472) T ss_pred CCCCceEEEEEEEEeecceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecCC-----CCCCC Confidence 2 2211 111111100000111112222 2333321 34788 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhh Q lcl|Aclame:pro 182 PLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNV 261 (392) Q Consensus 182 ~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d 261 (392) .+..+...++....+.....+.++..+.|-.+++.-.. .+..+..... ...+++.++++.+.+.+.....+ T Consensus 241 ~~e~v~~liDa~~~~~s~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~ 311 (472) T protein:vir:93 241 DIFMYKTLIDAYNRRLSDLSNTFKDSNELTYVLTNYDD-QELPEFKRLL--------RYYGAIKVSDNGGVDTIQVEVPV 311 (472) T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHhcCceeEeecCCc-ccchhhHHHH--------hhccccccCCCCcceeEeecCCH Confidence 88888888877776666666666666777666553221 1111111111 12234555555555555555556 Q ss_pred HHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHH--------------HHHHHHHHHHHHHHHHHHhh-hhh Q lcl|Aclame:pro 262 AQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMY--------------ASALNRYLRPAISELEYKLS-DHI 326 (392) Q Consensus 262 ~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~--------------~~~l~p~l~~i~~~l~~~l~-~~~ 326 (392) ..+....+...+.|+..-++|..-.+..+. +.+..+.+..+ ...+.-.++.+.+.+..... .++ T Consensus 312 ~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~-n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~i 390 (472) T protein:vir:93 312 ENSKKYLDELYQKIMLFGQAVDFSSDKFGS-APSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIKGEHKDV 390 (472) T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcccccc-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccee Confidence 677888888899999999998765543222 22223332221 11222222222221111100 112 Q ss_pred cccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccc--------ccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 327 SVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPA--------PENTNKKTTGQSNEPVP 392 (392) Q Consensus 327 ~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~--------~e~~~~~~~gd~~~p~p 392 (392) ++.+......+..+.+..+.++ .|+++..-+.+++ |+..+ ++.+ ...+....+++.+...+ T Consensus 391 ~v~f~~~~p~~~~~~~~~~~k~--~giis~et~l~~l---~~~~d~~~E~~ri~~E~~~~~~~~~~~~~~~~d~~~~ 462 (472) T protein:vir:93 391 DISFNYNKVANTELQVQTAQQS--MGIVSHETVLENH---PFVEDLQAELERIEQEQMEYNKQLPNLDDGGADGAQQ 462 (472) T ss_pred eEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHhccCcCcccCCCCCC Confidence 2222223333455556666655 5788876665544 44321 1111 11122222221111111 No 180 >protein:vir:2500 Length: 501 # NCBI annotation: putative portal gp5 # Family: family:all:524 # MgeID: mge:53 # MgeName: TM4 # Cross-refs: genbank:acc:NP_569741;genbank:gi:18496891;genbank:GeneID:932330 Probab=97.75 E-value=2.2e-05 Score=46.08 Aligned_cols=362 Identities=9% Similarity=-0.003 Sum_probs=148.4 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhh-----hhcchHHHHHHHHHHHhhhhCceeee Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARA-----ALRNSDLFSIILQLSSDLAIVKINAE 75 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-----a~~~~~v~~~i~~ia~~ia~~p~~~~ 75 (392) +.-.+++........- .....++ .+... ...+ +..+..+. .+.+....-+|+.+++.+---.+.+- T Consensus 31 l~~~l~~~~~~~~~rl--~~l~~YY-~G~~~--~~~~----~~~~~~~~~~~~~~~v~n~~~~ivd~~a~~l~~~gf~~~ 101 (501) T protein:vir:25 31 LVADMWRLHISERQWL--DRIYEYT-KGLRG--RPEV----PEGASDEVKELAKLSVKNVLSLVRDSFAQNLSVVGYRNA 101 (501) T ss_pred HHHHHHHHHHHHHHHH--HHHHHHH-hcCCC--chhc----cccCChhhhhhHhhhhcChHHHHHHHHHhhhcccceecC Confidence 2223443332221110 0000000 00000 0000 00011100 00111223345555443322233332 Q ss_pred ccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecC-ccc--eEE-EEEE-ec Q lcl|Aclame:pro 76 KKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFE-YEN--GMY-YNIT-FD 150 (392) Q Consensus 76 ~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~-~~~--~~~-~~~~-~~ 150 (392) ++.....+.+-...-........+..+.+.+|.+|+++.++.+|. .+..++|..+.+.+++ ... ..+ ..+. .. T Consensus 102 d~~~~~~l~~i~~~N~~d~~~~~~~~~a~i~G~ay~~v~~de~~~--~i~~~sp~~~~~iy~D~~~~~~~~~ai~~~~~~ 179 (501) T protein:vir:25 102 LAKENDPAWEMWQRNRMDARQAEVHRPALTYGASYVTVTPTDEGP--VFRTRSPRQILAVYADPSVDAWPQYALETWVAQ 179 (501) T ss_pred CccchHHHHHHHHhcChhHHHHHHHHHHhhcCceEEEEecCCCCC--eEEEeccccEEEEEecCCCCcceeEEEEEEeec Confidence 222222122111111223444568888899999999998888884 3567788888765533 211 111 1110 00 Q ss_pred --CcceeeeE----------------------------------------------EEeceeEEEecCCCcccccccCCH Q lcl|Aclame:pro 151 --DPKIEPIL----------------------------------------------QAPQSDLIHMKLLSIDGGKTGISP 182 (392) Q Consensus 151 --~~~~~~~~----------------------------------------------~~~~~~vih~~~~~~~~~~~G~s~ 182 (392) ........ .+..-.|+|+.+.... ...|.|. T Consensus 180 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPiv~f~N~~~~-~~~g~sd 258 (501) T protein:vir:25 180 KDAKPHRRGVLYDDTYMYELDLGEVVLGDAGGGQATQQPVNVREVTDVIEHGATFEGKPVCPVVRFVNGRDA-DDMIVGE 258 (501) T ss_pred cccCcceeEEEecCeeEEEEecCceeeeeccccccccccccccccccccccccccCCccceeeEeccCcccc-Cccccch Confidence 00000000 0111245555554322 2347887 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeecc-CCceEeecccChhh Q lcl|Aclame:pro 183 LYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLD-DLEEFTALEIKSNV 261 (392) Q Consensus 183 ~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~-~g~~~~~l~~~~~d 261 (392) +..+...++....+.........-.+.|..++.--.. .+.+ . + + ...++++.++ ++.++.++.. .+ T Consensus 259 ie~v~~l~Da~~~~~s~~~~~~e~~a~p~~~i~G~~~-~~~~-~---~-~-----~~~~~i~~~~~~~~~~~q~~~--~~ 325 (501) T protein:vir:25 259 VAPLILLQQAINSVNFDRLIVSRFGANPQRVISGWTG-SKAE-V---L-K-----ASALRVWTFEDPEVKAQAFPP--AS 325 (501) T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhccHHHHHhCCCC-Cccc-h---h-h-----hcccceeccCCCCceEEEecc--cC Confidence 6665555555544443333333333334322221111 1111 1 1 1 1234566665 4667766553 23 Q ss_pred HH-HHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------- Q lcl|Aclame:pro 262 AQ-LLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSD---------------- 324 (392) Q Consensus 262 ~~-~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~---------------- 324 (392) ++ +.+..+....+|+..-++|++.+|+.+++. +.++.+ +-...+.-.+...+..|...|-. T Consensus 326 ~~~~~~~l~~~i~~i~~~s~~P~~~~~~~~~N~-Sg~Al~-~~~~~l~~ka~~k~~~f~~~l~~~~rl~~~~~~~~~~~~ 403 (501) T protein:vir:25 326 VEPYNLILEEMLQHVAMVAQISPAQVTGKMINV-SAEALA-AAEANQQRKLAAKRESFGESWEQLLRLAAEMDDDPDTAA 403 (501) T ss_pred hHHHHHHHHHHHHHHHhhcCCChhhhccccCCh-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc Confidence 34 788999999999999999999998654433 223332 22222333333333333332211 Q ss_pred --hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccc----------------c-----CCCC Q lcl|Aclame:pro 325 --HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAP----------------E-----NTNK 381 (392) Q Consensus 325 --~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~----------------e-----~~~~ 381 (392) .+++.+......+..+.+..+.++.+.|+ +.-....+ ..|+.+.++.++ . +..+ T Consensus 404 ~~~i~v~w~~~~~~s~~~~ada~~kl~~~gi-s~et~~~~--~~g~~~~~ie~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 480 (501) T protein:vir:25 404 DSGAEVLWRDTEARSFGAVVDGITKLASAGI-PIEHLLSM--VPGMTQQTIQAIKDSLRGGEVKSLVDKLLSNEPAPVPP 480 (501) T ss_pred ceeeeEEecCCCCCCHHHHHHHHHHHHhcCC-CHHHHHHH--cCCCCHHHHHHHHHHHHHHhHHHHHHHhhccCcCCCCC Confidence 11122222223455667777778877774 33222211 124443321110 0 0011 Q ss_pred CCCCCCCCCCC Q lcl|Aclame:pro 382 KTTGQSNEPVP 392 (392) Q Consensus 382 ~~~gd~~~p~p 392 (392) .+++...++.+ T Consensus 481 ~~~~~~~~~~~ 491 (501) T protein:vir:25 481 PPPQAAAQALN 491 (501) T ss_pred CCCCCCccccc Confidence 11111111111 No 181 >protein:vir:1236 Length: 483 # NCBI annotation: similar to phage Spp1 gp6 (portal protein) # Family: family:all:125 # MgeID: mge:25 # MgeName: phi ETA # Cross-refs: genbank:acc:NP_510935;genbank:gi:17426269;genbank:GeneID:927380 Probab=97.75 E-value=2.3e-05 Score=46.06 Aligned_cols=370 Identities=9% Similarity=-0.005 Sum_probs=157.0 Q ss_pred CcchhhH--------------hhcccccccccc-cccccccccchhhhhh---hhcCCCCcccchhhhhcchHHHHHHHH Q lcl|Aclame:pro 1 MILPILN--------------FINQTNDPPEVG-SVQSYFPDGNDAQIME---SLLGDNNEWVSARAALRNSDLFSIILQ 62 (392) Q Consensus 1 m~Mg~~~--------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~a~~~~~v~~~i~~ 62 (392) |+..+|. ++.+......+- .... ...+...-... ...........+..-+.++-...+|+. T Consensus 22 ~~~~~~~~~~~~e~~~~~i~~~i~~~~~~~~r~~~l~~-YY~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Ivd~ 100 (483) T protein:vir:12 22 IFDAIVRTNNKPETLEEMIVRYIKQHLEKLPEISIGQE-YYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQ 100 (483) T ss_pred hhhcccccCCchhhHHHHHHHHHHHHHHHHHHHHHHHH-HhccccccccccccccccccccccccccccccchHHHHHHH Confidence 1111110 000000000000 0000 00000000000 000000000000011223444556666 Q ss_pred HHHhhhhCceeeeccccc------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeee Q lcl|Aclame:pro 63 LSSDLAIVKINAEKKKNQ------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYY 136 (392) Q Consensus 63 ia~~ia~~p~~~~~~~~~------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~ 136 (392) .++-+-.-|+.+.-.+.. .++. |. .......+..+.+.+|.+|.++..+.+|++. +..++|..+-+.. T Consensus 101 ~~~~l~G~p~~~~~~d~~~~~~l~~~~~--n~---~~~~~~~~~~~~~~~G~~y~~v~~d~d~~~~-i~~~~p~~~~~v~ 174 (483) T protein:vir:12 101 KVSYIVGKPIAFKHTDDEVVKRIDEVLG--NR---FDDKLHSVLTGASNKGIEWLHPYLDEEGEFK-LFRVPAEQGIPIW 174 (483) T ss_pred HhhhhcccCceeccCChHHHHHHHHHHh--cc---HHHHHHHHHHHHhhCCeEEEEEEEcCCCceE-EEEEcccceEEEE Confidence 666665556654322211 1111 22 2233455677888999999999998898865 7788999888876 Q ss_pred cCc--cceEEEEEEecCcceeeeEEEeceeEEEecCC---------------------Ccc---------cccccCCHHH Q lcl|Aclame:pro 137 FEY--ENGMYYNITFDDPKIEPILQAPQSDLIHMKLL---------------------SID---------GGKTGISPLY 184 (392) Q Consensus 137 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~---------------------~~~---------~~~~G~s~~~ 184 (392) +.. +...+....+..........+.+..+.|+... +.. ....|.|.+. T Consensus 175 d~~~~~~~~~~ir~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e 254 (483) T protein:vir:12 175 TDKEHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIF 254 (483) T ss_pred cCCCCCceEEEEEEEEeecceEEEEEecCeEEEEEEeCCeeeecccccccccccccccCCCCccceEEecCCCCCCCchh Confidence 532 12222111111111111112222222222100 000 0124778888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHH Q lcl|Aclame:pro 185 SLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQL 264 (392) Q Consensus 185 ~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~ 264 (392) .+...++....+.....+.++..+.|-.+++.-.. .+..+..... ...+++.++++.+++.+.....+..+ T Consensus 255 ~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~-~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~ 325 (483) T protein:vir:12 255 MYKTLIDAYNRRLSDLSNTFKDSNELTYVLTNYDD-QELPEFKRLL--------RYYGAIKVSDNGGVDTIQVEVPVENS 325 (483) T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCc-ccchhHHHhh--------hhccccccCCCCcceEEeecCCHHHH Confidence 87777777776666556666666667665553221 1111111111 12234445555555555545555667 Q ss_pred HHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHH--------------HHHHHHHHHHHHHHHHHHHh-hhhhccc Q lcl|Aclame:pro 265 LSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGM--------------YASALNRYLRPAISELEYKL-SDHISVN 329 (392) Q Consensus 265 ~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~--------------~~~~l~p~l~~i~~~l~~~l-~~~~~~d 329 (392) .+..+...+.|+..-++|..-.+..+. +.+..+.+.. +...+...++.+.+.+..+- ..++++. T Consensus 326 ~~~~~~l~~~I~~~s~~p~~~~~~~~~-n~Sg~Al~~~~~~l~~k~~~~~~~f~~~l~~~~~li~~~~~~~~~~~~i~v~ 404 (483) T protein:vir:12 326 KKYLDELYQKIMLFGQAVDFSSDKFGS-APSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIKGEHKDVDIS 404 (483) T ss_pred HHHHHHHHHHHHHHhCCCCCCcccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccceeeEE Confidence 777888888999999998755432221 2222233221 22222222222222211110 0122222 Q ss_pred chhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccc--------ccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 330 MRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPA--------PENTNKKTTGQSNEPVP 392 (392) Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~--------~e~~~~~~~gd~~~p~p 392 (392) +...+..+..+.+..+.++ .|+++..-+.+++ |+.++ |+.+ ....+...++..+...+ T Consensus 405 f~~~~p~~~~~~a~~~~kl--~GiiS~et~~~~~---~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~~~d~~~~ 473 (483) T protein:vir:12 405 FNYNKVANTELQVQTAQQS--MGIVSHETVLENH---PFVEDLQAELERIEQEQMEYNKQLPNLDDGGADGAQQ 473 (483) T ss_pred eCCCCCCCHHHHHHHHHHH--hccCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhhcccccccccCCccc Confidence 3333334556666666666 5888887776654 54322 2211 11122222222211111 No 182 >protein:vir:97336 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1666 # MgeName: 52A # Cross-refs: genbank:acc:YP_240606;genbank:gi:66396273;genbank:GeneID:5133692 Probab=97.73 E-value=2.4e-05 Score=45.87 Aligned_cols=364 Identities=9% Similarity=0.006 Sum_probs=156.8 Q ss_pred Ccchhh-Hhhcccccccccc-cccccccccchhhhh---hhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeee Q lcl|Aclame:pro 1 MILPIL-NFINQTNDPPEVG-SVQSYFPDGNDAQIM---ESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAE 75 (392) Q Consensus 1 m~Mg~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~ 75 (392) ..-.++ +++.+......+- .... ...+...-.. ............+..-+.++-..-+|+..++-+-.-|+++. T Consensus 44 ~~~~~i~~~i~~~~~~~~r~~~l~~-YY~g~~~i~~~~~~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~g~p~~~~ 122 (492) T protein:vir:97 44 TLEEMIVRYIKQHLEKLPEISIGQE-YYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKPIAFK 122 (492) T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-HhcccCccccccccccccccccccccccccccchHHHHHHHHhhhhcccCceec Confidence 000111 1111110000000 0000 0000000000 00000000000000111233445567766666655566543 Q ss_pred ccccc------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCc-cc-eEEEEE Q lcl|Aclame:pro 76 KKKNQ------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEY-EN-GMYYNI 147 (392) Q Consensus 76 ~~~~~------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~-~~-~~~~~~ 147 (392) ..+.. .++ + |. .......+..+++.+|.||.++..+.+|++. +..++|..+.+..+.. .+ ..+... T Consensus 123 ~~d~~~~~~l~~~~-~-n~---~~~~~~~~~~~~~~~G~a~~~v~~d~dg~~~-~~~~~p~~~~~i~d~~~~~~~~~~vr 196 (492) T protein:vir:97 123 HTDDEVVKRIDEVL-G-NR---FDDKLHSVLTGASNKGIEWLHPYLDEEGEFK-LFRVPAEQGIPIWTDKEHEELEAFIR 196 (492) T ss_pred cCchHHHHHHHHHH-h-cc---HHHHHHHHHHHHhhcCeEEEEEEecCCCceE-EEEEcccceEEEEcCCCCCceEEEEE Confidence 22211 111 1 32 2233456778888999999999998888764 7778999988877642 22 221111 Q ss_pred EecCcceeeeEEEeceeE-----------------------------------EEecCCCcccccccCCHHHHHHHHHHH Q lcl|Aclame:pro 148 TFDDPKIEPILQAPQSDL-----------------------------------IHMKLLSIDGGKTGISPLYSLRRESKI 192 (392) Q Consensus 148 ~~~~~~~~~~~~~~~~~v-----------------------------------ih~~~~~~~~~~~G~s~~~~~~~~i~~ 192 (392) .+..........+.+..+ ++++++ ..|.|.+..+...++. T Consensus 197 ~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn-----~~g~sd~e~v~~liDa 271 (492) T protein:vir:97 197 MYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNN-----DLEISDIFMYKTLIDA 271 (492) T ss_pred EEeeccceeEEEEecCeEEEEEEecCeeeecccccccccccccccCCCCCcceEEecCC-----CCCCCchHhHHHHHHH Confidence 111111111111222222 222221 2478888888888877 Q ss_pred HHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHH Q lcl|Aclame:pro 193 QRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTS 272 (392) Q Consensus 193 ~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~ 272 (392) ...+..-..+.+...+.|-.+++.-... +..+..... ...+++.++++.+.+.+.....+..+....+... T Consensus 272 ~d~~~S~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ 342 (492) T protein:vir:97 272 YNRRLSDLSNTFKDSNELTYVLKNYDDQ-ELPEFKRLL--------RYYGAIKVSDNGGVDTIQVEVPVENSKKYLDELY 342 (492) T ss_pred HHHHHHHHHHHHHHhccceeeeecCCcc-cchhHHHHH--------hhccceecCCCCcceeEeccCCHHHHHHHHHHHH Confidence 7766666666666666676555432211 111111111 1223455565555555554455566777888888 Q ss_pred HHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------h-----hhhcccchhhhhc Q lcl|Aclame:pro 273 KQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKL-----------S-----DHISVNMRPAIDP 336 (392) Q Consensus 273 ~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l-----------~-----~~~~~d~~~~~~~ 336 (392) +.|+..-++|..-.+..+ ++.+..+.+..+ ..+.-.+...+..|...| . ..+++........ T Consensus 343 ~~I~~~s~~p~~~~~~~~-~n~Sg~Al~~~~-~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~i~v~f~~~~p~ 420 (492) T protein:vir:97 343 QKIMLFGQAVDFSSDKFG-SAPSGVALEFLY-TNLNLKADKLARKAKVAIQELLWFVFEHFDIKGEHKDVDISFNYNKVA 420 (492) T ss_pred HHHHHHhCCCCCCccccc-cCcHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccceeeEEecCCCCC Confidence 999999999875543221 122233332221 111111222222222111 1 1122222222333 Q ss_pred chHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc--------cCCCCCCCCCCCCCCC Q lcl|Aclame:pro 337 LGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAP--------ENTNKKTTGQSNEPVP 392 (392) Q Consensus 337 ~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~--------e~~~~~~~gd~~~p~p 392 (392) +..+.+.++.++ .|+++..-+.+++ |+.++ |+.++ ...+...+++.+...+ T Consensus 421 ~~~e~a~~~~kl--~G~iS~et~l~~l---~~v~d~~~Eleri~~E~~~~~~~~~~~~~~~~~~~~~ 482 (492) T protein:vir:97 421 NTELQVQTAQQS--MGIVSHETVLENH---PFVEDLQAELERIEQEQTEYNKQLPNLDDGGADSAQQ 482 (492) T ss_pred CHHHHHHHHHHH--hccCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHhhhccccCCCCCCcc Confidence 455566666665 5788877666654 54332 22111 1122222222222111 No 183 >protein:vir:5961 Length: 503 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690661;genbank:geneid:6329220;genbank:gi:22855055;interpro:IPR006428;uniprot:P54309;genbank:GeneID:955279 Probab=97.71 E-value=2.6e-05 Score=45.75 Aligned_cols=375 Identities=7% Similarity=0.034 Sum_probs=166.4 Q ss_pred CcchhhHhhccccccccccc---ccccccc---cchhhhhhhhcCC-------------CCcccc----hhhhhcchHHH Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGS---VQSYFPD---GNDAQIMESLLGD-------------NNEWVS----ARAALRNSDLF 57 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~-------------~~~~v~----~~~a~~~~~v~ 57 (392) +.|.+..+.+.......... +...... ........-..+. .+.... +..-+.++-.. T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~~~~ri~~n~~~ 90 (503) T protein:vir:59 11 HTEELNEIIVESAKEIAEPDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDTKTNNRTSHAWHK 90 (503) T ss_pred hHHhHHHhhhhhhhhccchhHHHHHHHHHhhcHHHHHHHHHHhccccchhhccchhcccccccccccccccceeecchHH Confidence 44444443333221111000 0000000 0000000000000 000000 00112234455 Q ss_pred HHHHHHHHhhhhCceeeeccccc--cccc--cCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccce Q lcl|Aclame:pro 58 SIILQLSSDLAIVKINAEKKKNQ--GIID--NPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVN 133 (392) Q Consensus 58 ~~i~~ia~~ia~~p~~~~~~~~~--~~~~--~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~ 133 (392) .+|+..+.-+-.=|+++--.+.. ..+. .=| ........+..+.+.+|.+|.++..+.+|++. +..++|..+- T Consensus 91 ~ivd~~~~yl~g~~~~~~~~d~~~~~~l~~~~~n---~~~~~~~~~~~~~~~~G~~~~~v~~d~dg~~~-i~~~~p~~~~ 166 (503) T protein:vir:59 91 LFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADD---DFDDILNETVKNMSNKGIEYWHPFVDEEGEFD-YVIFPAEEMI 166 (503) T ss_pred HHHHHHHhhhhcCCeeeccCcHHHHHHHHHHHhc---CHHHHHHHHHHHHhhCCeEEEEEeecCCCceE-EEEEccceeE Confidence 67777777776667654332211 1111 112 34445566888889999999999988888865 7788888888 Q ss_pred eeecCcc-c-eEEE--EEEecCc--c-eeeeEEEeceeEEEecCC----------------------------------C Q lcl|Aclame:pro 134 TYYFEYE-N-GMYY--NITFDDP--K-IEPILQAPQSDLIHMKLL----------------------------------S 172 (392) Q Consensus 134 ~~~~~~~-~-~~~~--~~~~~~~--~-~~~~~~~~~~~vih~~~~----------------------------------~ 172 (392) +..++.. + .... .+..... . ......+.+..+.++... . T Consensus 167 ~i~d~~~~~~~~~~ir~~~~~~~~~~~~~~~evy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPiv~ 246 (503) T protein:vir:59 167 VVYKDNTRRDILFALRYYSYKGIMGEETQKAELYTDTHVYYYEKIDGVYQMDYSYGENNPRPHMTKGGQAIGWGRVPIIP 246 (503) T ss_pred EEEeCCCCCceEEEEEEEEEecCCCceEEEEEEEeCCcEEEEEEcCCcccccccccccccccceeecceeccCCccceEE Confidence 7766532 2 1111 1111110 0 011112333333222110 0 Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceE Q lcl|Aclame:pro 173 IDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEF 252 (392) Q Consensus 173 ~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~ 252 (392) ......|.|.+..+...++....+.....+.++..+.|-.+++.-.... ..+....+ ...+++.++++.++ T Consensus 247 ~~nn~~~~sd~~~~~~liDa~d~~~s~~~~~~~~~~~~~~v~~g~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~ 317 (503) T protein:vir:59 247 FKNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGEN-PKEFTANL--------RYHSVIKVSGDGGV 317 (503) T ss_pred ecCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhcCCeeEeecCCccc-cchhhhhh--------hcccceeccCCCcc Confidence 0011347888888888887777666555666666666766555322211 11111111 12245556655555 Q ss_pred eecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHH--------------HHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 253 TALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQI--------------SGMYASALNRYLRPAISEL 318 (392) Q Consensus 253 ~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~--------------~~~~~~~l~p~l~~i~~~l 318 (392) +.+........+.+..+...+.|...-++|..-.+..+ ++.+..+. +..+...|...++.+.+.+ T Consensus 318 ~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~-~~~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~ 396 (503) T protein:vir:59 318 DTLRAEIPVDSAAKELERIQDELYKSAQAVDNSPETIG-GGATGPALENLYALLDLKANMAERKIRAGLRLFFWFFAEYL 396 (503) T ss_pred eeEeccCCHHHHHHHHHHHHHHHHHHhcccCCCccccc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 55544444445556666666667666666543221111 11111222 2223333333333333333 Q ss_pred HHHhh------hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc------------- Q lcl|Aclame:pro 319 EYKLS------DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAP------------- 376 (392) Q Consensus 319 ~~~l~------~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~------------- 376 (392) ...-. ..+.+.+..-+..+..+.+..+.+++.+|+++...+.+++ |+.++ |+.++ T Consensus 397 ~~~~~~~~~~~~~i~i~f~~~~p~d~~~~~~~~~kl~~~GiiS~et~l~~l---~~v~d~~~E~~ri~~E~~~~~~~~~~ 473 (503) T protein:vir:59 397 RNTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARN---PFVQDPEEELARIEEEMNQYAEMQGN 473 (503) T ss_pred HhccCcccccccceeEEeCCCCCCCHHHHHHHHHHHHhCCCCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhhhcc Confidence 22111 0123333333445667788888999999999988777655 54321 22211 Q ss_pred --cCCCCCCCCCCCCCCC Q lcl|Aclame:pro 377 --ENTNKKTTGQSNEPVP 392 (392) Q Consensus 377 --e~~~~~~~gd~~~p~p 392 (392) +.......++++.|.| T Consensus 474 ~~~~~~~~~~~~~~~~~~ 491 (503) T protein:vir:59 474 LLDDEGGDDDLEEDDPNA 491 (503) T ss_pred ccCccCCCCCCCcCCCCC Confidence 1001111223333444 No 184 >protein:vir:96839 Length: 474 # NCBI annotation: ORF008 # Family: family:all:125 # MgeID: mge:1642 # MgeName: EW # Cross-refs: genbank:acc:YP_240152;genbank:gi:66395815;genbank:GeneID:5133180 Probab=97.67 E-value=3e-05 Score=45.39 Aligned_cols=363 Identities=10% Similarity=0.009 Sum_probs=155.1 Q ss_pred CcchhhHhh-ccccccc-ccccccccccccchhhhhhh---hcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeee Q lcl|Aclame:pro 1 MILPILNFI-NQTNDPP-EVGSVQSYFPDGNDAQIMES---LLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAE 75 (392) Q Consensus 1 m~Mg~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~ 75 (392) +.-.++..+ ....... .-..... ...+...-.... ..........+..-+.++-...+++..++-+-.-|+.+- T Consensus 26 ~~~~~i~~~i~~~~~~~~~~~~~~~-Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~~~l~g~p~~~~ 104 (474) T protein:vir:96 26 TQEEMIIRLINDHKPKIDDITVGER-YYNHDPDVLRLAPKLDNKGEIDPLKPDWRMFTNYHQNLVDQKVAYAVANPVTFS 104 (474) T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHH-HhccCCcchhccchhcccccccccccchhcccchHHHHHHhhhhhhcccCceee Confidence 111111111 0000000 0000000 000000000000 000000000000112233344456666655555555543 Q ss_pred ccccc------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCc--cceEEEEE Q lcl|Aclame:pro 76 KKKNQ------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEY--ENGMYYNI 147 (392) Q Consensus 76 ~~~~~------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~--~~~~~~~~ 147 (392) -.+.. .++. | ........+......+|.+|.++..+.+|++. +..++|..+-+..+.. +....... T Consensus 105 ~~d~~~~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~~y~d~~~~~~-i~~~~p~~~~~v~d~~~~~~~~~~vr 178 (474) T protein:vir:96 105 SDDDKSLKTIQEVLN--H---KWDDKLVDILTAASNKGIEWLQPYIDENGEFK-TFRVPAEQAIPIWTNKERDTLKAFIR 178 (474) T ss_pred cCchHHHHHHHHHHh--c---CHHHHHHHHHHHHHhcCeeEEEEEecCCCceE-EEEEcccceEEEEcCCCCCceEEEEE Confidence 22111 1121 2 22333455667788899999998888888765 7788999888877642 12211111 Q ss_pred EecCcceeeeEEEecee---------------------------------------EEEecCCCcccccccCCHHHHHHH Q lcl|Aclame:pro 148 TFDDPKIEPILQAPQSD---------------------------------------LIHMKLLSIDGGKTGISPLYSLRR 188 (392) Q Consensus 148 ~~~~~~~~~~~~~~~~~---------------------------------------vih~~~~~~~~~~~G~s~~~~~~~ 188 (392) .+..........+.... |+|++++ ..|.|.+..... T Consensus 179 ~~~~~~~~~~~~yt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~~~nn-----~~g~sd~e~v~~ 253 (474) T protein:vir:96 179 YYRLDGAERVEYWTDSDVTYYEYQDGILIPDYYHGEEHIQSHYYVGNKRVSWGRVPFIPFKNN-----PQEMSDLFMYKT 253 (474) T ss_pred EEeecCceEEEEEeCCeEEEEEecCCceeeccccccccccccccccccccCCCceeEEEeccC-----CCCCCcHHHHHH Confidence 11111111111122222 2333321 247888888888 Q ss_pred HHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeecc-CCceEeecccChhhHHHHHH Q lcl|Aclame:pro 189 ESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLD-DLEEFTALEIKSNVAQLLSQ 267 (392) Q Consensus 189 ~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~-~g~~~~~l~~~~~d~~~~e~ 267 (392) .++....+.....+.++..+.|-.+++--... +.+..... ...++++.++ +|.+++.+........+.+. T Consensus 254 liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~-~~~~~~~~--------~~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~ 324 (474) T protein:vir:96 254 IIDAMDKRLSDTQNTFDESTELIYILKGYEGQ-DLDEFMRN--------LKYYKAINVDGDGSGVDTIQIEVPVQSSKEY 324 (474) T ss_pred HHHHHHHHHHHHHHHHHHhccceeeeecCCcc-cccchhhh--------hhcCceEEecCCCCceeEEeecCChHHHHHH Confidence 88877777666667777777776555432211 11111111 1123556665 45666666655555567778 Q ss_pred HHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHH---HHHHHHHHHHHHHh-------hh-----hhcccchh Q lcl|Aclame:pro 268 TDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALN---RYLRPAISELEYKL-------SD-----HISVNMRP 332 (392) Q Consensus 268 ~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~---p~l~~i~~~l~~~l-------~~-----~~~~d~~~ 332 (392) .+...+.|+..-++|..-.+..+ ++.+..+.+..+..... -.-+.+.+.|.+.+ +. .+.+.+.. T Consensus 325 ~~~l~~~i~~~s~~p~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~~i~~~~~~~~~~~~i~i~f~~ 403 (474) T protein:vir:96 325 LDMLRDYVIEFGQGVDFQQDKFG-NSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYKLNIKVQDVEITFNF 403 (474) T ss_pred HHHHHHHHHHHhCCccccccccc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccceeeEEecc Confidence 88889999999999976543222 22233333322221111 11111122221111 11 11221221 Q ss_pred hhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc--------cCCCCCCCCCCCCCCC Q lcl|Aclame:pro 333 AIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAP--------ENTNKKTTGQSNEPVP 392 (392) Q Consensus 333 ~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~--------e~~~~~~~gd~~~p~p 392 (392) - ......+.++.+.++|+++...+.+++ |+..+ |+.++ +..++. .+|++.... T Consensus 404 ~---~p~~~~e~~~~~~~ag~iS~et~~~~~---~~v~d~~~E~~ri~~E~~e~~~~~~~~-~~~~~~~~~ 467 (474) T protein:vir:96 404 N---VMVNELEQSQIGVQSQYLSKETVVTNH---PWVDDPVAELERIEQDNIDFNKQLPPL-EGDANGRAQ 467 (474) T ss_pred C---CCcCHHHHHHHHHhcCCCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhccccc-ccccccccC Confidence 1 222234445566778999998877765 44321 22111 111111 111111111 No 185 >protein:vir:4782 Length: 522 # NCBI annotation: putative minor capsid protein 1 # Family: family:all:898 # MgeID: mge:104 # MgeName: MM1 # Cross-refs: genbank:acc:NP_150162;swissprot:trembl:q94m49;genbank:gi:26553451;uniprot:Q94M49;genbank:GeneID:955983 Probab=97.67 E-value=3e-05 Score=45.35 Aligned_cols=381 Identities=9% Similarity=0.007 Sum_probs=162.2 Q ss_pred chhhH----hhccccccccccc---cc-ccc---cccchh---hhhhhhcCCCC--------cccchhhhhcchHHHHHH Q lcl|Aclame:pro 3 LPILN----FINQTNDPPEVGS---VQ-SYF---PDGNDA---QIMESLLGDNN--------EWVSARAALRNSDLFSII 60 (392) Q Consensus 3 Mg~~~----~~~~~~~~~~~~~---~~-~~~---~~~~~~---~~~~~~~~~~~--------~~v~~~~a~~~~~v~~~i 60 (392) ||+|. ++++-........ +. .+. ...... ....++.+... .....+.-.+......++ T Consensus 1 m~~~~~~k~~~~k~~~~~~~~~~~~i~~~~~i~~~~~~~~~i~~~~~~y~g~~~~~~~~~~~~~~~~~~~~slnl~~~i~ 80 (522) T protein:vir:47 1 MSLFQKVKDFFSRGRYYMQTSNLNSILEHPKIAVTQEEYDRIKRNLVYYQSKWDDVQYKNTDGDIKSRPMNHLPIARTAS 80 (522) T ss_pred CchHHHHHHHHHHHHHHhhcccchhccccCCCCCCHHHHHHHHHHHHHhcCCcccccccccCcchhcccceecchHHHHH Confidence 66654 4432221100000 00 000 111111 11223222100 000111122223334455 Q ss_pred HHHHHhhhhCceeee--ccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceee-ec Q lcl|Aclame:pro 61 LQLSSDLAIVKINAE--KKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTY-YF 137 (392) Q Consensus 61 ~~ia~~ia~~p~~~~--~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~-~~ 137 (392) +.+|+-+..=|..+. .......+.+=-..-......+..+...+..|.+++.+..+. |. ..+..+++..+-+. .+ T Consensus 81 ~~~A~lv~~e~~~i~v~d~~~~~~l~~~l~~n~f~~~~~~~~e~a~a~G~~a~k~~~d~-~~-~~i~~v~ad~~~P~~~~ 158 (522) T protein:vir:47 81 KKIASLVYNEQATITTKNEILQKFLDDMLTNDRFNKNFERYLESCLALGGLAMRPYIDG-DK-VRVAFIQAPVFFPLESN 158 (522) T ss_pred HHHhhhhcCCcceeecCChHHHHHHHHHHhhcchHHHHHHHHHHhhccCCEEEEEEEcC-Cc-eEEEEEcCCceEEEEEc Confidence 555555543333221 111111111100011122223445555556676666665542 33 23344444443332 11 Q ss_pred Cc----------------cceEEEE-EEe----------------------c--------CcceeeeE------------ Q lcl|Aclame:pro 138 EY----------------ENGMYYN-ITF----------------------D--------DPKIEPIL------------ 158 (392) Q Consensus 138 ~~----------------~~~~~~~-~~~----------------------~--------~~~~~~~~------------ 158 (392) .. ....+|. ..+ . ....|..+ T Consensus 159 ~~~~~e~a~~~~~~~~~~~~~~~yt~lE~he~~~~~~~~~~~~~~~~~~~I~n~ly~~~~~~~lG~~v~l~~~~e~~~l~ 238 (522) T protein:vir:47 159 TQDVSSAAILTKTIKSEGRKNVYYTLVEFHEWVTADGQETGSTNDKKYYRITNELYRSDVNDVLGQRVNLSELDKYKNLE 238 (522) T ss_pred CCceEEEEEEEEEEeecccceeEEEEEEEeeecccccccccccccCCceEEEEEEeecCCCcccCccccccccccccCCC Confidence 10 1111111 000 0 00001100 Q ss_pred ---EE---eceeEEEecCCC----cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcce----EEEeCCCCCchH Q lcl|Aclame:pro 159 ---QA---PQSDLIHMKLLS----IDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPG----VLTVKGGGLLSD 224 (392) Q Consensus 159 ---~~---~~~~vih~~~~~----~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~----il~~~~~~~~~~ 224 (392) .+ +.--+.|++.+. ..+..+|+|.+..+...++..........+-|+-|-..-. +++........+ T Consensus 239 ~~~~~~~~~~Plf~y~~~~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g~~~i~v~~~~l~~~~~~~~g~ 318 (522) T protein:vir:47 239 PVTVFENLSRPLFTYLKTPGMNNKDINSPLGLSIFDNAKTTIDFINRSYDEFMWEVRMGQRRVIVPEHLTQRQYQRPDGT 318 (522) T ss_pred CceEeCCCCcceEEEecCCcccccccCCCcCCchhhhhHHHHHHHHHHHHHHHHHHHhccceeecchHHhccCCCCCCcc Confidence 00 011133555432 2234579999999999998888777776677775554311 122211111110 Q ss_pred HH-HHHH---HHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHH- Q lcl|Aclame:pro 225 KD-KASR---SRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQI- 299 (392) Q Consensus 225 ~~-~~~~---~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~- 299 (392) .. ...+ .+.|..... -.+++-+++.++....+-++.+..+...+.|+...|+++..+|...++..+..++ T Consensus 319 ~~~~~~fd~~~~~f~~~~~-----~~~~~~~i~~~~~~ir~e~~~~~~~~~l~~i~~~~gls~~tf~~~~~~~kTAtEi~ 393 (522) T protein:vir:47 319 IDFRPRFDVEQNVYMQIGG-----SSMDAGGITDLTSPIRANDYILAISEGLKLFEMQIGVSSGMFTFDGQGMKTATEIV 393 (522) T ss_pred cccccccCcccceEeecCC-----CCCCCCcceeeccccChHHHHHHHHHHHHHHHHHhCCCccccCccccccccHHHHH Confidence 00 0000 011111110 0123446788888889999999999999999999999999998654433222222 Q ss_pred --HHHHHHHHHHHHHHHHHHHHHH------------hh-------hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHH Q lcl|Aclame:pro 300 --SGMYASALNRYLRPAISELEYK------------LS-------DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQ 358 (392) Q Consensus 300 --~~~~~~~l~p~l~~i~~~l~~~------------l~-------~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE 358 (392) .+....++.-..+.++.+|... +. ..+.++...-+..|.++.......++.+|++++.+ T Consensus 394 s~~~~~~~t~~~~~~~~~~al~~lv~~i~~l~~~~~~~~~~~~~~~~i~v~f~D~i~~D~~~~~~~~~~~v~aG~~s~e~ 473 (522) T protein:vir:47 394 SENSDTYQMRSSIVALVEQSIKELCVSMCELGKAVGVYSGEIPELDDISVNLDDGVFTDRHAELDYWAKMVAAGFSTKKR 473 (522) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceeEEEcCCCCCCCHHHHHHHHHHHHhcCCCCHHH Confidence 1111222222233333322211 10 11334444555567777888888999999999998 Q ss_pred HHHHHHhCCCCccc----ccccc--CC---C---CCCCCCCCCCCC Q lcl|Aclame:pro 359 ATFVLQEAGYIPKD----LPAPE--NT---N---KKTTGQSNEPVP 392 (392) Q Consensus 359 ~R~~l~~~g~~~~e----~~~~e--~~---~---~~~~gd~~~p~p 392 (392) ++..+ .|+...+ ++++. .. + ..-++..++..| T Consensus 474 ~i~~~--~g~~eeea~~el~ri~~E~~~~~~~~~~~~~~~~~~~~~ 517 (522) T protein:vir:47 474 AIGKT--LNISGVEAEKELNAINSELLPMNDAELAIYGMHDQNEEK 517 (522) T ss_pred HHHhc--CCCChHHHHHHHHHHHHhhccCCCCCCCCCCCCCccccc Confidence 87653 4665432 22221 11 1 111222333333 No 186 >protein:vir:98883 Length: 517 # NCBI annotation: portal # Family: family:all:898 # MgeID: mge:1568 # MgeName: BCJA1c # Cross-refs: genbank:acc:YP_164413;genbank:gi:56694903;genbank:GeneID:3197273 Probab=97.67 E-value=3.1e-05 Score=45.32 Aligned_cols=372 Identities=10% Similarity=0.021 Sum_probs=159.8 Q ss_pred chhh----Hhhcccccc-----cc--cccccccccccchhh---hhhhhcCCCCcccch---------hhhhcchHHHHH Q lcl|Aclame:pro 3 LPIL----NFINQTNDP-----PE--VGSVQSYFPDGNDAQ---IMESLLGDNNEWVSA---------RAALRNSDLFSI 59 (392) Q Consensus 3 Mg~~----~~~~~~~~~-----~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~---------~~a~~~~~v~~~ 59 (392) |++| +|+++-... .. .....-..+...... ...++.+... .+.. +.-++..... T Consensus 1 m~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~w~~~Y~g~~~-~~~~~~~~~~~~~~~~~sl~~~~-- 77 (517) T protein:vir:98 1 MKVIQRIKNFFKRGGYALSGQTLKSINDHEKINIDPNELARIERNLRQYEGDYP-QVEYINSQGKIQERDYMTLNLRK-- 77 (517) T ss_pred CchHHHHHHHHHHHHHHhcccchhHhhcCCceecCHHHHHHHHHHHHHhcCCCc-ccccccccccccccceeecCcHH-- Confidence 5555 444332110 00 000000011111111 1223332211 1110 0111222222 Q ss_pred HHHHHHhhhhC----cee--eecccc-----------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceE Q lcl|Aclame:pro 60 ILQLSSDLAIV----KIN--AEKKKN-----------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADM 122 (392) Q Consensus 60 i~~ia~~ia~~----p~~--~~~~~~-----------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~ 122 (392) .||..+|+| +.. +-+... ...+.+==.........+..+.+.+..|.+++.+..+. |. . T Consensus 78 --~i~~~~A~Ll~~e~~~i~v~d~~~~~~~~~~~~~~~e~l~~i~~~n~f~~~~~~~~e~a~a~G~~a~k~~~d~-~~-~ 153 (517) T protein:vir:98 78 --LSADVLSGLVFNEQCEVYVSDAKDEEKKDNSFKTAHEFIQHVFQHNKFIKNLSDYLEPTFALGGLTVRPYVDN-GE-I 153 (517) T ss_pred --HHHHHhhhhhcCCcceEEecccccccccccchhHHHHHHHHHHHhccHHHHHHHHHHHHhhhCCEEEEEEEeC-Ce-e Confidence 344444443 222 211110 00010000000112222334555556677777665553 33 2 Q ss_pred EEEEeccccceeeecCc------------------cceEEEEEEe-----------------------cCcceeee---- Q lcl|Aclame:pro 123 KWEYLRPSQVNTYYFEY------------------ENGMYYNITF-----------------------DDPKIEPI---- 157 (392) Q Consensus 123 ~l~~l~~~~v~~~~~~~------------------~~~~~~~~~~-----------------------~~~~~~~~---- 157 (392) .+..++++.+-+...+. ...+|..... +....|.. T Consensus 154 ~I~~v~ad~~~Pl~~~~~~v~~~ai~~~~~~~~~~~~~~Yt~lE~H~~~~~~~~~~~y~I~n~ly~s~~~~~lG~~v~L~ 233 (517) T protein:vir:98 154 EFSWALANAFYPLRSNSNGISEGVMKSVTTKVIGNKTVYYTLLEFHEWEKTEEGESLYVITNELYKSDNEGEIGKRIPLE 233 (517) T ss_pred EEEEEcCCeeEEEEecCCCeEEEEEEEEEEEeecCCceEEEEEEEEecCceeccCCcEEEEEEEEecCCCcccccccccc Confidence 35555665554311111 1111110000 00001111 Q ss_pred ---------EEEe--c-eeEEEecCCCcc----cccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCC Q lcl|Aclame:pro 158 ---------LQAP--Q-SDLIHMKLLSID----GGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGL 221 (392) Q Consensus 158 ---------~~~~--~-~~vih~~~~~~~----~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~ 221 (392) ..+. + --+.|++.+.++ +..+|+|.+..+...+............-|+.|-.. .+ ++...- T Consensus 234 ~~~e~l~~~~~~~g~~~Plf~y~~~p~~N~~~~~splG~S~~~~a~~~~d~lD~~~s~~~~e~~~g~~~-i~--vp~~~l 310 (517) T protein:vir:98 234 ELYEGMQEKTYIQGLSRPLFNYLKPSGFNNINPHSPLGLGITDNSVSTLKKINDTYDQFWWEIKMGQRT-VF--VSDVML 310 (517) T ss_pred ccccCCCcceeECCCCcceEEEecCCcccccccCCCCCCchhhhhHHHHHHHHHHHHHHHHHHHhCCcc-ee--cChhhh Confidence 1111 1 112355543222 345699999999999988887777777777765543 22 221110 Q ss_pred c----hHHH-----HHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc Q lcl|Aclame:pro 222 L----SDKD-----KASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ 292 (392) Q Consensus 222 ~----~~~~-----~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~ 292 (392) . .... .......|..... -+++-.++.++....+-++.+..+...++|+...|+++..+|...++ T Consensus 311 ~~~~~~~g~~~~~~~d~~~~~y~~~~~------~~~~~~i~~~~~~iR~e~~~~~~~~~L~~i~~~~Gls~~t~~~~~~~ 384 (517) T protein:vir:98 311 RTVPDESGMPPPQVFDPDVNVYKSIRM------GTDEEFVKDVTHDIRTEQYKEAINQALRTLEMELKLSVGTFSFDGRS 384 (517) T ss_pred ccccCCCCcccCCCCCcccceeeeccC------CCCCCceeeeccccchHHHHHHHHHHHHHHHHHhCCCcccccccccc Confidence 0 0000 0000000111000 01233577788888888999999999999999999999999965544 Q ss_pred cchHHHH---HHHHHHHHHHHHHHHHHHHHHH------------hh-------hhhcccchhhhhcchHHHHHHHHHHHh Q lcl|Aclame:pro 293 QSSIQQI---SGMYASALNRYLRPAISELEYK------------LS-------DHISVNMRPAIDPLGDNYLSTISTATR 350 (392) Q Consensus 293 ~~~~~~~---~~~~~~~l~p~l~~i~~~l~~~------------l~-------~~~~~d~~~~~~~~~~~~~~~~~~~~~ 350 (392) ..+..++ ++-...++.-..+.++..|... +. ..+.+++..-+..|.++.+.....++. T Consensus 385 ~kTATEi~s~~~~~~~t~~~~~~~~~~aL~~lv~~i~~l~~~~~~~~~~~~~~~~v~v~f~D~i~~D~~~~~~~~~~~v~ 464 (517) T protein:vir:98 385 MKTATEIVSENDLTYRTRNDHVYEVEQFIKGLVISVLELAKTYKLFGGEIPSAEHIGVDFDDGVFQDRSALLRFYGQAKT 464 (517) T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCcceEEEcCCCCCCCHHHHHHHHHHHHh Confidence 3333222 1122233333333333333321 11 123344555555677888888889999 Q ss_pred CCCcCHHHHHHHHHhCCCCccc----cccccC----CCCCCC-CCCCCCCC Q lcl|Aclame:pro 351 WGALAENQATFVLQEAGYIPKD----LPAPEN----TNKKTT-GQSNEPVP 392 (392) Q Consensus 351 ~g~~T~nE~R~~l~~~g~~~~e----~~~~e~----~~~~~~-gd~~~p~p 392 (392) +|++++-+++.++ .|+...+ ++++.. .+|.+. ..+.++.| T Consensus 465 aG~ms~~~~i~~~--~g~~eeeA~~e~~~i~~E~~~~~~~~~~~~~~~~~~ 513 (517) T protein:vir:98 465 FGFIPTVEAIQRI--FKVPKKTAEQWLEEIRKDQIELDPVTISQRAQKRMF 513 (517) T ss_pred cCCCCHHHHHHHh--CCCChHHHHHHHHHHHHhccccCCCCccccccCCCC Confidence 9999999987664 3665443 222211 111111 11112222 No 187 >protein:vir:94498 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1508 # MgeName: 88 # Cross-refs: genbank:acc:YP_240672;genbank:gi:66396340;genbank:GeneID:5133762 Probab=97.56 E-value=4.4e-05 Score=44.45 Aligned_cols=365 Identities=10% Similarity=0.005 Sum_probs=161.5 Q ss_pred hhHhhccccccccccccccccccc--chhhh------------------hhhhcCCC-----------Ccccc---hhhh Q lcl|Aclame:pro 5 ILNFINQTNDPPEVGSVQSYFPDG--NDAQI------------------MESLLGDN-----------NEWVS---ARAA 50 (392) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------~~~~~~~~-----------~~~v~---~~~a 50 (392) +||+|+....++....+-....+. ..... ..-+.+.. +.... +..- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~k 80 (474) T protein:vir:94 1 MFNIIRMPWDKPYGEEVVEQLKPQFETQEEMIVRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVHGNIDYDKPDWR 80 (474) T ss_pred CcccccccCCCchhhHHHHhhhhcccCHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccchhccccccccccCcce Confidence 233333322221111000000000 00000 00000000 00000 0001 Q ss_pred hcchHHHHHHHHHHHhhhhCceeeecccc--ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEec Q lcl|Aclame:pro 51 LRNSDLFSIILQLSSDLAIVKINAEKKKN--QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLR 128 (392) Q Consensus 51 ~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~ 128 (392) +.++-...+|+..++-+-.-|+.+--.+. ...+..=+. .........+....+.+|.+|.++..+.+|++. +..++ T Consensus 81 i~~n~~k~Ivd~~~~~l~g~p~~~~~~d~~~~~~l~~~~~-n~~~~~~~e~~~~~~~~G~~~~~~~~d~~~~~~-i~~~~ 158 (474) T protein:vir:94 81 ITTNFHQNLVDQKVSYVASKPVTYSCEDENVLKVIHDVLD-TRWDNKLIDILTATSNKGIDWLQVYINENGEMK-LFRVP 158 (474) T ss_pred eecchHHHHHHHHHhhhhcCCceeccCcHHHHHHHHHHHh-ccHHHHHHHHHHHHhhcCceEEEEEecCCCeeE-EEEEc Confidence 12334455677777666666766533221 111111111 122333455678888899999999888888764 66788 Q ss_pred cccceeeecCc-cc-eEEEEEEecCcceeeeEEEecee-----------------------------------EEEecCC Q lcl|Aclame:pro 129 PSQVNTYYFEY-EN-GMYYNITFDDPKIEPILQAPQSD-----------------------------------LIHMKLL 171 (392) Q Consensus 129 ~~~v~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------vih~~~~ 171 (392) |..+-+..+.. .+ ..+....+..........+.+.. |++++++ T Consensus 159 p~~~~~v~d~~~~~~~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn 238 (474) T protein:vir:94 159 AEQAIPIWVDKEREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGNWGRVPFIAFKNN 238 (474) T ss_pred ccceEEEEcCCCCCceEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccCCCccceEEecCC Confidence 88888876643 12 21111111111111111122222 3333321 Q ss_pred CcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCce Q lcl|Aclame:pro 172 SIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEE 251 (392) Q Consensus 172 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~ 251 (392) ..|.|.+..+...++....+.....+.++..+.|-.+++--.. .+.+..... ....+++.+++|.+ T Consensus 239 -----~~g~sd~e~v~~liDa~n~~~s~~~~~~~~~~~~~lv~~g~~~-~~~~~~~~~--------~~~~~~i~~~~~~~ 304 (474) T protein:vir:94 239 -----PEEVSDIWMYKSIIDAIDKRLSDAQNMFDESVELIYILKGYEG-EDLEEFMRG--------LKYYKAINVDGDGG 304 (474) T ss_pred -----cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCc-ccchhhhhh--------hhccceeeccCCCc Confidence 3588888888888887776666656666666666555543221 111111111 12345666776666 Q ss_pred EeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHH--------------HHHHHHHHHHHHHHH Q lcl|Aclame:pro 252 FTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGM--------------YASALNRYLRPAISE 317 (392) Q Consensus 252 ~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~--------------~~~~l~p~l~~i~~~ 317 (392) ++.+........+.+..+...+.|...-++|..-.+..+ ++.+..+.+.. +...++..++.+.+. T Consensus 305 ~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~ 383 (474) T protein:vir:94 305 VETIQVEVPVSSTKEYIDLMRVYIMEFGQGVDFQTDKFG-SAPSGIALKFLYGNLDLKANKLKNKATVAIQELISFIIDF 383 (474) T ss_pred eeEEeecCCHHHHHHHHHHHHHHHHHHhCccccCccccc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 666665555556677778888889888888864332211 12222233222 222222222222221 Q ss_pred HHHHhh-hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccc--------ccCCCCCCCC Q lcl|Aclame:pro 318 LEYKLS-DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPA--------PENTNKKTTG 385 (392) Q Consensus 318 l~~~l~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~--------~e~~~~~~~g 385 (392) +..+.. ..+.+.... .......+.++.+.++|+++...+.+++ |+.++ ++.+ ....+...++ T Consensus 384 ~~~~~d~~~i~v~f~~---~~p~~~~e~a~~~~~~g~iS~et~l~~l---~~v~D~~~E~eri~~E~~~~~~~~~~~~~~ 457 (474) T protein:vir:94 384 NNLKTDVKDIEISFNF---NRMMNDAEQSQIIAQSQYLSRETLVKSS---PLVDDYKAELERIEQEQMEYNKQLPNLDDG 457 (474) T ss_pred hCCCcccceeeEEecc---CcccCHHHHHHHHHHcCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhhccccCCC Confidence 111100 112222111 2222344555667778999988777665 54332 2211 1223334333 Q ss_pred CCCCCCC Q lcl|Aclame:pro 386 QSNEPVP 392 (392) Q Consensus 386 d~~~p~p 392 (392) +.+...+ T Consensus 458 ~~~~~~~ 464 (474) T protein:vir:94 458 GADGAQQ 464 (474) T ss_pred CCCCccc Confidence 3333333 No 188 >protein:vir:97447 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1676 # MgeName: 92 # Cross-refs: genbank:acc:YP_240744;genbank:gi:66396413;genbank:GeneID:5133803 Probab=97.56 E-value=4.4e-05 Score=44.45 Aligned_cols=365 Identities=10% Similarity=0.005 Sum_probs=161.5 Q ss_pred hhHhhccccccccccccccccccc--chhhh------------------hhhhcCCC-----------Ccccc---hhhh Q lcl|Aclame:pro 5 ILNFINQTNDPPEVGSVQSYFPDG--NDAQI------------------MESLLGDN-----------NEWVS---ARAA 50 (392) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------~~~~~~~~-----------~~~v~---~~~a 50 (392) +||+|+....++....+-....+. ..... ..-+.+.. +.... +..- T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~YY~g~~~i~~~~~~~~~~~~~~~~~~~~k 80 (474) T protein:vir:97 1 MFNIIRMPWDKPYGEEVVEQLKPQFETQEEMIVRLIDDHRKQLDKITVGQRYYDKDNDIVKQMKKVDVHGNIDYDKPDWR 80 (474) T ss_pred CcccccccCCCchhhHHHHhhhhcccCHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhcccchhccccccccccCcce Confidence 233333322221111000000000 00000 00000000 00000 0001 Q ss_pred hcchHHHHHHHHHHHhhhhCceeeecccc--ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEec Q lcl|Aclame:pro 51 LRNSDLFSIILQLSSDLAIVKINAEKKKN--QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLR 128 (392) Q Consensus 51 ~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~ 128 (392) +.++-...+|+..++-+-.-|+.+--.+. ...+..=+. .........+....+.+|.+|.++..+.+|++. +..++ T Consensus 81 i~~n~~k~Ivd~~~~~l~g~p~~~~~~d~~~~~~l~~~~~-n~~~~~~~e~~~~~~~~G~~~~~~~~d~~~~~~-i~~~~ 158 (474) T protein:vir:97 81 ITTNFHQNLVDQKVSYVASKPVTYSCEDENVLKVIHDVLD-TRWDNKLIDILTATSNKGIDWLQVYINENGEMK-LFRVP 158 (474) T ss_pred eecchHHHHHHHHHhhhhcCCceeccCcHHHHHHHHHHHh-ccHHHHHHHHHHHHhhcCceEEEEEecCCCeeE-EEEEc Confidence 12334455677777666666766533221 111111111 122333455678888899999999888888764 66788 Q ss_pred cccceeeecCc-cc-eEEEEEEecCcceeeeEEEecee-----------------------------------EEEecCC Q lcl|Aclame:pro 129 PSQVNTYYFEY-EN-GMYYNITFDDPKIEPILQAPQSD-----------------------------------LIHMKLL 171 (392) Q Consensus 129 ~~~v~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------vih~~~~ 171 (392) |..+-+..+.. .+ ..+....+..........+.+.. |++++++ T Consensus 159 p~~~~~v~d~~~~~~~~~~ir~~~~~~~~~~~~yt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn 238 (474) T protein:vir:97 159 AEQAIPIWVDKEREELKSFIRYYKFNNEEKVEFWTDTTVTYYVLENGGLIPDYYYGANHVQSHFSNGNWGRVPFIAFKNN 238 (474) T ss_pred ccceEEEEcCCCCCceEEEEEEEEecCeEEEEEEeCCeEEEEEEcCCccccccccCcCcccccccccCCCccceEEecCC Confidence 88888876643 12 21111111111111111122222 3333321 Q ss_pred CcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCce Q lcl|Aclame:pro 172 SIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEE 251 (392) Q Consensus 172 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~ 251 (392) ..|.|.+..+...++....+.....+.++..+.|-.+++--.. .+.+..... ....+++.+++|.+ T Consensus 239 -----~~g~sd~e~v~~liDa~n~~~s~~~~~~~~~~~~~lv~~g~~~-~~~~~~~~~--------~~~~~~i~~~~~~~ 304 (474) T protein:vir:97 239 -----PEEVSDIWMYKSIIDAIDKRLSDAQNMFDESVELIYILKGYEG-EDLEEFMRG--------LKYYKAINVDGDGG 304 (474) T ss_pred -----cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCc-ccchhhhhh--------hhccceeeccCCCc Confidence 3588888888888887776666656666666666555543221 111111111 12345666776666 Q ss_pred EeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHH--------------HHHHHHHHHHHHHHH Q lcl|Aclame:pro 252 FTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGM--------------YASALNRYLRPAISE 317 (392) Q Consensus 252 ~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~--------------~~~~l~p~l~~i~~~ 317 (392) ++.+........+.+..+...+.|...-++|..-.+..+ ++.+..+.+.. +...++..++.+.+. T Consensus 305 ~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~ 383 (474) T protein:vir:97 305 VETIQVEVPVSSTKEYIDLMRVYIMEFGQGVDFQTDKFG-SAPSGIALKFLYGNLDLKANKLKNKATVAIQELISFIIDF 383 (474) T ss_pred eeEEeecCCHHHHHHHHHHHHHHHHHHhCccccCccccc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 666665555556677778888889888888864332211 12222233222 222222222222221 Q ss_pred HHHHhh-hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccc--------ccCCCCCCCC Q lcl|Aclame:pro 318 LEYKLS-DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPA--------PENTNKKTTG 385 (392) Q Consensus 318 l~~~l~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~--------~e~~~~~~~g 385 (392) +..+.. ..+.+.... .......+.++.+.++|+++...+.+++ |+.++ ++.+ ....+...++ T Consensus 384 ~~~~~d~~~i~v~f~~---~~p~~~~e~a~~~~~~g~iS~et~l~~l---~~v~D~~~E~eri~~E~~~~~~~~~~~~~~ 457 (474) T protein:vir:97 384 NNLKTDVKDIEISFNF---NRMMNDAEQSQIIAQSQYLSRETLVKSS---PLVDDYKAELERIEQEQMEYNKQLPNLDDG 457 (474) T ss_pred hCCCcccceeeEEecc---CcccCHHHHHHHHHHcCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhhccccCCC Confidence 111100 112222111 2222344555667778999988777665 54332 2211 1223334333 Q ss_pred CCCCCCC Q lcl|Aclame:pro 386 QSNEPVP 392 (392) Q Consensus 386 d~~~p~p 392 (392) +.+...+ T Consensus 458 ~~~~~~~ 464 (474) T protein:vir:97 458 GADGAQQ 464 (474) T ss_pred CCCCccc Confidence 3333333 No 189 >protein:vir:95806 Length: 440 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1578 # MgeName: SMP # Cross-refs: genbank:acc:YP_950583;genbank:gi:119953778;genbank:GeneID:5076876 Probab=97.50 E-value=5.4e-05 Score=43.96 Aligned_cols=368 Identities=10% Similarity=-0.023 Sum_probs=157.0 Q ss_pred hhHhhcccccccccccccccccccchhhh-hhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeee--ccccc- Q lcl|Aclame:pro 5 ILNFINQTNDPPEVGSVQSYFPDGNDAQI-MESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAE--KKKNQ- 80 (392) Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~--~~~~~- 80 (392) |++-+.....+.-..- .... .+..... ........+.. ..-+.++-..-.|+..++-+-.-|+++. +.... T Consensus 1 ~~~~~~~~~~~r~~~l-~~yy-~g~~~~~~~~~~~~~~~~~---~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~~~~~~~ 75 (440) T protein:vir:95 1 MLAAFLGSQKQRLAIL-ASYA-QGDNFSILSGHRRLDDEKA---DYRVRHKWGGYISSFATGYVIGNPVSIGVMEGGSAD 75 (440) T ss_pred ChhhHHHHHHHHHHHH-HHHh-ccCCcccccccccccccCC---cceeecchHHHHHHhhhhheeccCceEeeCCCccHH Confidence 3222111111100000 0000 0000000 00000000100 0012223334455555555444455442 11111 Q ss_pred --cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccc--eEEEEEEecCcceee Q lcl|Aclame:pro 81 --GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN--GMYYNITFDDPKIEP 156 (392) Q Consensus 81 --~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~ 156 (392) ..+.+-............+..+.+.+|.+|.++..+.+|++. +..++|..+.+..+.... ..+....+....... T Consensus 76 ~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~~-i~~~~p~~~~~~~d~~~~~~~~~~i~~~~~~~~~~ 154 (440) T protein:vir:95 76 QLSTIKDIEWQNDINALNSDLAFDASVYGRAYEYHFRDKDKVDR-VVLISPLEMFVIRDLTVEQNIIAAVHLPIYADKVN 154 (440) T ss_pred HHHHHHHHHHhcCHhHHHHHHHHHHhhcCeEEEEEEecCCCceE-EEEEcccceEEEEcCCCCCceEEEEEEEEecCceE Confidence 011111111123333456778888999999999988888874 667899999888766542 222111111111111 Q ss_pred eEEEeceeEE----------------------------EecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCC Q lcl|Aclame:pro 157 ILQAPQSDLI----------------------------HMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSL 208 (392) Q Consensus 157 ~~~~~~~~vi----------------------------h~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~ 208 (392) ...+.+..++ ++++ ...|.|.+..+...++....+.....+..+..+ T Consensus 155 ~~vyt~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n-----~~~g~sd~e~v~~lida~~~~~s~~~~~~~~~~ 229 (440) T protein:vir:95 155 MTVYTKDKVITYKPYSNNSVRLVVDDVKKHSYNDVPVVEWWN-----NRFRMGDYESEISLIDAYDAGQSDTANYMSDLN 229 (440) T ss_pred EEEEeCCeEEEEEEecCCccceeecceeeccCceeeEEEeeC-----CCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhh Confidence 1123333333 3332 134778888877777777776666666666666 Q ss_pred CcceEEEeCCC-CCchHHHHHHHHH-HHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHc Q lcl|Aclame:pro 209 NVPGVLTVKGG-GLLSDKDKASRSR-SFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYI 286 (392) Q Consensus 209 ~~~~il~~~~~-~~~~~~~~~~~~~-~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~l 286 (392) .|-.+++.... ....++....... ...-..........+++.+++.+........+....+...+.|+..-++|..-. T Consensus 230 ~~~~v~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~ 309 (440) T protein:vir:95 230 DAMLLVKGDLDGIKLSPEDAAKMKDANMLFLKTGISTTGQQTTADASYIYKQYDVNGTEAYKNRLANDIHRFSRIPNLDD 309 (440) T ss_pred cceeeeecccccCCCCccchhhhhhccceecccccccccCCCCcceeEEeecCCHHHHHHHHHHHHHHHHHHhCCccccc Confidence 77666664221 1111111111111 111111111111223344444444444455567788888999999999998655 Q ss_pred CCcccccchHHHHH--------------HHHHHHHHHHHHHHHHHHHHHhh-----hhhcccchhhhhcchHHHHHHHHH Q lcl|Aclame:pro 287 GGQGDQQSSIQQIS--------------GMYASALNRYLRPAISELEYKLS-----DHISVNMRPAIDPLGDNYLSTIST 347 (392) Q Consensus 287 g~~~~~~~~~~~~~--------------~~~~~~l~p~l~~i~~~l~~~l~-----~~~~~d~~~~~~~~~~~~~~~~~~ 347 (392) +..+. +.+..+.+ ..+...+...++.+.+.+...-. .++++.+..-...+..+.+..+.+ T Consensus 310 ~~~~~-n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~~~~~~~v~i~f~~~~p~~~~~~ad~~~k 388 (440) T protein:vir:95 310 DRFNS-TSSGIALLYKMIGLEQVRKDKETYFTKALRRRYELISNIHKAINGPVIEANKLTFTFHPNIPQDVWTEIKAYIE 388 (440) T ss_pred ccccc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccceEEeCCCCCCCHHHHHHHHHH Confidence 43222 22222222 22233333333333333222111 112233333333455666777766 Q ss_pred HHhCCCcCHHHHHHHHHhCCCCc--cccccc-----------cC-CCCCC-CCCCCC Q lcl|Aclame:pro 348 ATRWGALAENQATFVLQEAGYIP--KDLPAP-----------EN-TNKKT-TGQSNE 389 (392) Q Consensus 348 ~~~~g~~T~nE~R~~l~~~g~~~--~e~~~~-----------e~-~~~~~-~gd~~~ 389 (392) + .|+++...+.+++ |+.. .|+-++ .. .+... ++...| T Consensus 389 l--~g~iS~et~~~~l---~~~d~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~~e 440 (440) T protein:vir:95 389 A--GGEISQETLMENA---SFTDYKTEHSRILKQGGSSDLEIGQIVGDADVGQADTE 440 (440) T ss_pred H--hccCcHHHHHHhC---CCCCcHHHHHHHHHHHHHhhhhHHhhccCCCCCCcCCC Confidence 6 5788876655544 5432 121111 00 11122 222223 No 190 >protein:vir:94101 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1494 # MgeName: 96 # Cross-refs: genbank:acc:YP_240229;genbank:gi:66395892;genbank:GeneID:5133270 Probab=97.45 E-value=6.6e-05 Score=43.52 Aligned_cols=371 Identities=12% Similarity=-0.004 Sum_probs=164.5 Q ss_pred CcchhhHhhccc--------------ccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHh Q lcl|Aclame:pro 1 MILPILNFINQT--------------NDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSD 66 (392) Q Consensus 1 m~Mg~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ 66 (392) +.-.+.+..... ....... ...+.........+......... +..-+.++-....|+..++- T Consensus 19 ~i~~~i~~~~~~~~r~~~~~~~y~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~ki~~n~~~~ivd~~~~y 94 (474) T protein:vir:94 19 HIEALIESHKDDRERMVNLYNRYKTHIDYVPIF-KRRPIEEKEDFETGGNVRRLDVS---VNNKLNNSFDSEIVDTRVGY 94 (474) T ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhcchhhhh-cchhhhhhhhhhhcccccccccC---cccccccchHHHHHHhHhhh Confidence 211211111100 0000000 00000000000000000000000 00112233344566666666 Q ss_pred hhhCceeeecccc----c---cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCc Q lcl|Aclame:pro 67 LAIVKINAEKKKN----Q---GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEY 139 (392) Q Consensus 67 ia~~p~~~~~~~~----~---~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~ 139 (392) +-.-|+++--.+. . ..+.+=............+..+...+|.||.++..+.+|++ .+..++|..+-+..++. T Consensus 95 l~g~pv~~~~~~~~~~~e~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~~~~i~p~~~~~v~d~~ 173 (474) T protein:vir:94 95 LHGVPVTYDLDENAEKNEKLKKFITNFAIRNSVDDEDSEIGKMAAICGYGARLAYIDTNGDI-RIKNIDPYNVIFVGDNI 173 (474) T ss_pred eeccceeEeeCCCCcchHHHHHHHHHHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCee-EEEEEcccceEEEEcCC Confidence 6555766532111 0 11111111123444566788889999999999988888875 46778888887776554 Q ss_pred cceEEEE--EEecCccee----eeEEEeceeEEEecCC------------Cc---------ccccccCCHHHHHHHHHHH Q lcl|Aclame:pro 140 ENGMYYN--ITFDDPKIE----PILQAPQSDLIHMKLL------------SI---------DGGKTGISPLYSLRRESKI 192 (392) Q Consensus 140 ~~~~~~~--~~~~~~~~~----~~~~~~~~~vih~~~~------------~~---------~~~~~G~s~~~~~~~~i~~ 192 (392) +...+.. +.......+ ....+.+..+.+++.. +. .....|.|.+..+...++. T Consensus 174 ~~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa 253 (474) T protein:vir:94 174 LEPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPLFGVPNNKEMIGDAEKVIHLIDA 253 (474) T ss_pred CceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccceEEecCCCCCCCchHHHHHHHHH Confidence 4332111 111000000 0011122222222210 00 0112477878777777776 Q ss_pred HHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHH Q lcl|Aclame:pro 193 QRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTS 272 (392) Q Consensus 193 ~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~ 272 (392) ...+.....+.+...+.|-.+++-- ..+++. .... ...+.+.+.+++.+++-+.....+..+.+..+... T Consensus 254 ~d~~~S~~~~~~~~~~~~~l~i~g~--~~~~~~-~~~~-------~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 323 (474) T protein:vir:94 254 YDLTMSDASSEISQTRLAYLVLRGM--GMSEEM-IQET-------QKSGAFELFDKDMDVKYLTKDVNDTMIENHLDRIE 323 (474) T ss_pred HHHHHHHHHHHHHHhhcchhhhccC--CCCchh-hhhh-------hhcceeEecCCCCceeEEeccCCHHHHHHHHHHHH Confidence 6666555555555555565554432 111211 1111 12344555666767776665555566777888888 Q ss_pred HHHHHHhcccHHHcCCcccccchHHHHH--------------HHHHHHHHHHHHHHHHHHHHHhh-------hhhcccch Q lcl|Aclame:pro 273 KQYAKVYGLPDSYIGGQGDQQSSIQQIS--------------GMYASALNRYLRPAISELEYKLS-------DHISVNMR 331 (392) Q Consensus 273 ~~Ia~~fgVP~~~lg~~~~~~~~~~~~~--------------~~~~~~l~p~l~~i~~~l~~~l~-------~~~~~d~~ 331 (392) +.|...-++|..-.+..+. +.+..+.+ ..+...+.-.++.+...+..+-. ..+++.+. T Consensus 324 ~~I~~~s~~p~~~~~~~~~-n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~l~~~~~~~~~~~~~~i~~~f~ 402 (474) T protein:vir:94 324 KNIMRFAKSVNFNSDEFNG-NVPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVILSALKRKGYNLDDDSYLNLIFKFT 402 (474) T ss_pred HHHHHHhCCcccccccccc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccccccceEEeC Confidence 9999999999765543222 22222222 22333333333333333332210 11233333 Q ss_pred hhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccc--------ccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 332 PAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPA--------PENTNKKTTGQSNEPVP 392 (392) Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~--------~e~~~~~~~gd~~~p~p 392 (392) .-+..+..+.+..+.++ .|+++..-+.+++ |+.++ ++.+ ....+...+|+.++-.+ T Consensus 403 ~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l---~~v~d~~~E~eri~~E~~e~~~~~~~~~~~~~~~~~~ 469 (474) T protein:vir:94 403 RNIPVNKLEESQVLINL--KGQVSERTRLGQS---QLVDDVDYELDEMEKESLEFNDKLPDIDEGDANDKSQ 469 (474) T ss_pred CCCCCCHHHHHHHHHHH--hccCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhhcccccCCCcCCCCc Confidence 33334556677777776 4888887777665 54332 1111 12222233333332222 No 191 >protein:vir:105889 Length: 474 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1514 # MgeName: phiETA3 # Cross-refs: genbank:acc:YP_001004371;genbank:gi:122891826;genbank:GeneID:4712360 Probab=97.45 E-value=6.6e-05 Score=43.52 Aligned_cols=371 Identities=12% Similarity=-0.004 Sum_probs=164.5 Q ss_pred CcchhhHhhccc--------------ccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHh Q lcl|Aclame:pro 1 MILPILNFINQT--------------NDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSD 66 (392) Q Consensus 1 m~Mg~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ 66 (392) +.-.+.+..... ....... ...+.........+......... +..-+.++-....|+..++- T Consensus 19 ~i~~~i~~~~~~~~r~~~~~~~y~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~ki~~n~~~~ivd~~~~y 94 (474) T protein:vir:10 19 HIEALIESHKDDRERMVNLYNRYKTHIDYVPIF-KRRPIEEKEDFETGGNVRRLDVS---VNNKLNNSFDSEIVDTRVGY 94 (474) T ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhhcchhhhh-cchhhhhhhhhhhcccccccccC---cccccccchHHHHHHhHhhh Confidence 211211111100 0000000 00000000000000000000000 00112233344566666666 Q ss_pred hhhCceeeecccc----c---cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCc Q lcl|Aclame:pro 67 LAIVKINAEKKKN----Q---GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEY 139 (392) Q Consensus 67 ia~~p~~~~~~~~----~---~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~ 139 (392) +-.-|+++--.+. . ..+.+=............+..+...+|.||.++..+.+|++ .+..++|..+-+..++. T Consensus 95 l~g~pv~~~~~~~~~~~e~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~~~~d~~~~~-~~~~i~p~~~~~v~d~~ 173 (474) T protein:vir:10 95 LHGVPVTYDLDENAEKNEKLKKFITNFAIRNSVDDEDSEIGKMAAICGYGARLAYIDTNGDI-RIKNIDPYNVIFVGDNI 173 (474) T ss_pred eeccceeEeeCCCCcchHHHHHHHHHHHhhcCHhHHHHHHHHHHhhcCeEEEEEEeCCCCee-EEEEEcccceEEEEcCC Confidence 6555766532111 0 11111111123444566788889999999999988888875 46778888887776554 Q ss_pred cceEEEE--EEecCccee----eeEEEeceeEEEecCC------------Cc---------ccccccCCHHHHHHHHHHH Q lcl|Aclame:pro 140 ENGMYYN--ITFDDPKIE----PILQAPQSDLIHMKLL------------SI---------DGGKTGISPLYSLRRESKI 192 (392) Q Consensus 140 ~~~~~~~--~~~~~~~~~----~~~~~~~~~vih~~~~------------~~---------~~~~~G~s~~~~~~~~i~~ 192 (392) +...+.. +.......+ ....+.+..+.+++.. +. .....|.|.+..+...++. T Consensus 174 ~~~~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa 253 (474) T protein:vir:10 174 LEPTYSLRYFYEKDDDNGTDYVYAEFYDNAYYYVFRGEGIDALQEVGRYEHLFDYNPLFGVPNNKEMIGDAEKVIHLIDA 253 (474) T ss_pred CceEEEEEEEEEeeCCCceEEEEEEEEcCceEEEEeecCCCcccccccccCCCCccceEEecCCCCCCCchHHHHHHHHH Confidence 4332111 111000000 0011122222222210 00 0112477878777777776 Q ss_pred HHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHH Q lcl|Aclame:pro 193 QRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTS 272 (392) Q Consensus 193 ~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~ 272 (392) ...+.....+.+...+.|-.+++-- ..+++. .... ...+.+.+.+++.+++-+.....+..+.+..+... T Consensus 254 ~d~~~S~~~~~~~~~~~~~l~i~g~--~~~~~~-~~~~-------~~~~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 323 (474) T protein:vir:10 254 YDLTMSDASSEISQTRLAYLVLRGM--GMSEEM-IQET-------QKSGAFELFDKDMDVKYLTKDVNDTMIENHLDRIE 323 (474) T ss_pred HHHHHHHHHHHHHHhhcchhhhccC--CCCchh-hhhh-------hhcceeEecCCCCceeEEeccCCHHHHHHHHHHHH Confidence 6666555555555555565554432 111211 1111 12344555666767776665555566777888888 Q ss_pred HHHHHHhcccHHHcCCcccccchHHHHH--------------HHHHHHHHHHHHHHHHHHHHHhh-------hhhcccch Q lcl|Aclame:pro 273 KQYAKVYGLPDSYIGGQGDQQSSIQQIS--------------GMYASALNRYLRPAISELEYKLS-------DHISVNMR 331 (392) Q Consensus 273 ~~Ia~~fgVP~~~lg~~~~~~~~~~~~~--------------~~~~~~l~p~l~~i~~~l~~~l~-------~~~~~d~~ 331 (392) +.|...-++|..-.+..+. +.+..+.+ ..+...+.-.++.+...+..+-. ..+++.+. T Consensus 324 ~~I~~~s~~p~~~~~~~~~-n~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~l~~~~~~~~~~~~~~i~~~f~ 402 (474) T protein:vir:10 324 KNIMRFAKSVNFNSDEFNG-NVPIIGMKLKLMALENKCMTFERKMTAMLRYQFKVILSALKRKGYNLDDDSYLNLIFKFT 402 (474) T ss_pred HHHHHHhCCcccccccccc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccccccceEEeC Confidence 9999999999765543222 22222222 22333333333333333332210 11233333 Q ss_pred hhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccc--------ccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 332 PAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPA--------PENTNKKTTGQSNEPVP 392 (392) Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~--------~e~~~~~~~gd~~~p~p 392 (392) .-+..+..+.+..+.++ .|+++..-+.+++ |+.++ ++.+ ....+...+|+.++-.+ T Consensus 403 ~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l---~~v~d~~~E~eri~~E~~e~~~~~~~~~~~~~~~~~~ 469 (474) T protein:vir:10 403 RNIPVNKLEESQVLINL--KGQVSERTRLGQS---QLVDDVDYELDEMEKESLEFNDKLPDIDEGDANDKSQ 469 (474) T ss_pred CCCCCCHHHHHHHHHHH--hccCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhhcccccCCCcCCCCc Confidence 33334556677777776 4888887777665 54332 1111 12222233333332222 No 192 >protein:vir:94805 Length: 492 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1531 # MgeName: 29 # Cross-refs: genbank:acc:YP_240531;genbank:gi:66396197;genbank:GeneID:5133585 Probab=97.44 E-value=6.6e-05 Score=43.50 Aligned_cols=369 Identities=8% Similarity=-0.012 Sum_probs=155.5 Q ss_pred Cc-chh-hHhhccccccccc-ccccccccccchhhh---hhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceee Q lcl|Aclame:pro 1 MI-LPI-LNFINQTNDPPEV-GSVQSYFPDGNDAQI---MESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINA 74 (392) Q Consensus 1 m~-Mg~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~ 74 (392) +. -.+ .+++.+......+ ..... ...+...-. .............+..-+.++-...+|+..++-+-.-|+++ T Consensus 43 ~~~~~~i~~~i~~~~~~~~r~~~l~~-YY~g~~~I~~~~~~~~~~~~~~~~~~~~ri~~n~~k~Ivd~~~~yl~G~p~~~ 121 (492) T protein:vir:94 43 ETLEEMIVRYIKQHLEKLPEISIGQE-YYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKPIAF 121 (492) T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH-HhccccccccccccccccccccccccccccccchHHHHHHHHHhhhcccCcee Confidence 00 000 0111111000000 00000 000000000 00000000000000111223444556776666665566654 Q ss_pred eccccc------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCc-cc-eEEEE Q lcl|Aclame:pro 75 EKKKNQ------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEY-EN-GMYYN 146 (392) Q Consensus 75 ~~~~~~------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~-~~-~~~~~ 146 (392) .-.+.. .++. | ........+..+.+.+|.+|.++..+.+|++. +..++|..+.+.++.. .+ ..+.. T Consensus 122 ~~~d~~~~~~l~~~~~--n---~~~~~~~~~~~~a~~~G~a~~~v~~d~dg~~~-~~~~~p~~~~~v~d~~~~~~~~a~i 195 (492) T protein:vir:94 122 KHTDDEVVKRIDEVLG--N---RFDDKLHSVLTGASNKGIEWLHPYLDEEGEFK-LFRVPAEQGIPIWTDKEHEELEAFI 195 (492) T ss_pred ccCchHHHHHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEEEecCCCceE-EEEEcccceEEEEcCCCCCceEEEE Confidence 322211 1121 3 23344566778889999999999888888764 6778998888776532 22 22211 Q ss_pred EEecCcceeeeEEEeceeEEEecCC---------------------Ccc---------cccccCCHHHHHHHHHHHHHHH Q lcl|Aclame:pro 147 ITFDDPKIEPILQAPQSDLIHMKLL---------------------SID---------GGKTGISPLYSLRRESKIQRAS 196 (392) Q Consensus 147 ~~~~~~~~~~~~~~~~~~vih~~~~---------------------~~~---------~~~~G~s~~~~~~~~i~~~~~~ 196 (392) ..+..........+....+.++... +.. ....|.|.+..+...++....+ T Consensus 196 r~~~~~~~~~~~~y~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~sd~e~v~~liDa~d~~ 275 (492) T protein:vir:94 196 RMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTHFSTGSWGKIPFIPFKNNDLEISDIFMYKTLIDAYNRR 275 (492) T ss_pred EEEeeccceeEEEEecCeEEEEEEecCeeeeccccccccccccccccCCCccceEEecCCCCCCCchHHHHHHHHHHHHH Confidence 1111111111111222222222100 000 1124788888888888877777 Q ss_pred HHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 197 DRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYA 276 (392) Q Consensus 197 ~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia 276 (392) ..-..+.++..+.|-.+++.-... +..+..... ...+++.++++.+++.+........+....+...+.|+ T Consensus 276 ~S~~~~~~~~~~~p~lv~~g~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~ 346 (492) T protein:vir:94 276 LSDLSNTFKDSNELTYVLKNYDDQ-ELPEFKRLL--------RYYGAIKVSDNGGVDTIQVEVPVENSKKYLDELYQKIM 346 (492) T ss_pred HHHHHHHHHHhcCceeeeecCCcc-cchhhHHHH--------hhccceecCCCCcceeEeccCCHHHHHHHHHHHHHHHH Confidence 666666667667776665432211 111111111 12244555555555555444444556667777788888 Q ss_pred HHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------h-----hhhcccchhhhhcchHH Q lcl|Aclame:pro 277 KVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKL-----------S-----DHISVNMRPAIDPLGDN 340 (392) Q Consensus 277 ~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l-----------~-----~~~~~d~~~~~~~~~~~ 340 (392) ..-++|..-.+..+ ++.+..+.+..+ ..+.-.+...+..|...| . .++.+....-+..+..+ T Consensus 347 ~~s~~p~~~~~~~~-~n~Sg~Al~~~~-~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~~~~~~~i~v~f~~~~p~~~~e 424 (492) T protein:vir:94 347 LFGQAVDFSSDKFG-SAPSGVALEFLY-TNLNLKADKLARKAKVAIQELLWFVFEHFDIKGEHKDVDISFNYNKVANTEL 424 (492) T ss_pred HHhCCcCCCccccc-cCchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccceeeEEecCCCCCCHHH Confidence 88888864433211 122223332211 111111222222222211 0 12223333333345556 Q ss_pred HHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc--------cCCCCCCCC-CCCCCCC Q lcl|Aclame:pro 341 YLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAP--------ENTNKKTTG-QSNEPVP 392 (392) Q Consensus 341 ~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~--------e~~~~~~~g-d~~~p~p 392 (392) .+..+..+ .|+++..-+.+++ |+.++ |+.++ ..++...++ ..+++.. T Consensus 425 ~~~~~~kl--~giiS~et~~~~l---~~v~d~~~E~eri~~E~~~~~~~~~~~~~~~~~~~~~~ 483 (492) T protein:vir:94 425 QVQTAQQS--MGIVSHETVLENH---PFVEDLQAELERIEQEQMEYNKQLPNLDDGGADSAQQQ 483 (492) T ss_pred HHHHHHHH--hccCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhhccccccccCCCCccc Confidence 66666665 4788887776655 54332 22111 112222111 1111111 No 193 >protein:vir:97376 Length: 320 # NCBI annotation: putative portal protein # Family: family:all:11744 # MgeID: mge:1675 # MgeName: Q54 # Cross-refs: genbank:acc:YP_762589;genbank:gi:115304290;genbank:GeneID:5130579 Probab=97.43 E-value=3.7e-06 Score=50.39 Aligned_cols=311 Identities=14% Similarity=0.170 Sum_probs=143.9 Q ss_pred chhhHhhcccccccccc--cccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc Q lcl|Aclame:pro 3 LPILNFINQTNDPPEVG--SVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~ 80 (392) ||||||.++..-++... .++. .+-..+ .+|.+...-. +.+-+|+.||.- +-.|+..+. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~ 60 (320) T protein:vir:97 1 MGIFNFKKRETLTPELKESIIRQ-VTIEDE----SPFTGTTDFN--------------VRNEVAESIATY-LGAYKTSAK 60 (320) T ss_pred CCccccccccccChhHHhhhhhe-eeeccC----CCcccccccc--------------hhhHHHHHHHHH-hhhhccccc Confidence 99999988765443221 1111 111111 1222222211 222233333311 112333332 Q ss_pred cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCc-ceeeeEE Q lcl|Aclame:pro 81 GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDP-KIEPILQ 159 (392) Q Consensus 81 ~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 159 (392) .+- -..+-..|++.++.+.+...-.|+++... .|++ + .+.+++.--. ... .++..+. ..-..++ T Consensus 61 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~-~~~~~~~~~~---~~~-~~~~~D~FN~~V~mt 125 (320) T protein:vir:97 61 RLS----LLTNNPSFLRRLVKHALHNKTTYVYKSPT-YGWL-----I-TDSMTIEGLR---ARL-TFTLPDPFNSAVTMT 125 (320) T ss_pred eee----eeeCCHHHHHHHHHHhhcccceEEeeCCc-ccee-----e-ecceeeeeee---eeE-EEecCcccceeEEEE Confidence 221 11122368999999999988889886532 2321 1 1122221000 000 0011110 0111122 Q ss_pred EeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch---HHHHHHHHHHHhc Q lcl|Aclame:pro 160 APQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS---DKDKASRSRSFMK 236 (392) Q Consensus 160 ~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~---~~~~~~~~~~~~~ 236 (392) ++-.++= -.++..+|.-+-+.. .-. ..+.....+-+.|-+....+++++-+--.+ |+...+..+...- T Consensus 126 vpfyD~~-----ILdnpl~gv~tqe~g-kM~---g~a~~~v~kkL~~~~~IKafi~Tdid~GLee~kD~~~~kIk~mq~~ 196 (320) T protein:vir:97 126 VPFYDVG-----IIDSPLVEVDTEEAN-KML---EAAYSAVMKKLHNTGAIKAFISSDIDVGLEKMKEESDSKIKAMLAT 196 (320) T ss_pred eeeechh-----hhhhhhcccChHHhh-HHH---HHHhhhhhhhccccceeEEEEecccchhHHHHHHHHHHHHHHHHHH Confidence 2222221 123445676666333 222 233445566678888899999987642222 2333333333323 Q ss_pred cccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHH-- Q lcl|Aclame:pro 237 RSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPA-- 314 (392) Q Consensus 237 ~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i-- 314 (392) ++--.+.-+++.|-+++++..+-.-. ...-.+..+...+.-|++|..+|-+ +++..+.-+|+..++.|++.++ T Consensus 197 A~~~nG~T~i~~~dDI~Qi~pDYS~s-n~~D~~l~~t~alS~y~m~~~IL~G----sAte~~~Iaf~~~~V~PLL~Q~~~ 271 (320) T protein:vir:97 197 AELLSGYTYIQRGDDVTQMMPDYTTS-NVTDFAAMRTFAASQLSVSDKILDG----SATDGEKVAVMFRFVEPILEQFRE 271 (320) T ss_pred HHHhcCcccccCCcceeeeccccccc-chhHHHHHHHHHHhhcCCchhhccc----cCCcceeeehhhHhHHHHHHHhhh Confidence 33234567888888888876543222 1222344566778899999999944 3334566788999999999886 Q ss_pred -HHHHHHHhhhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccccCCCCCCCCCCCCC Q lcl|Aclame:pro 315 -ISELEYKLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPENTNKKTTGQSNEP 390 (392) Q Consensus 315 -~~~l~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p 390 (392) +..|..++...+ .++-+..+|.+.-|.+ .||.....| +...|||-..- T Consensus 272 ~Ek~Lvy~m~~E~-----------------FVs~mtTGG~l~S~~~------~~~~~~~~~-----~~~~~~~~~~~ 320 (320) T protein:vir:97 272 YEPSLIYAMRDEF-----------------FVSFMTTGGMLNSNRV------DGWGKEKAP-----NESKGGDVGDV 320 (320) T ss_pred cCcceeeeeccce-----------------eeeeeecCceeecccc------cccccccCC-----ccccCCcccCC Confidence 444444332211 1111112665555532 243221111 11233333222 No 194 >protein:vir:105292 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1679 # MgeName: PH15 # Cross-refs: genbank:acc:YP_950666;genbank:gi:119967836;genbank:GeneID:4643171 Probab=97.39 E-value=7.9e-05 Score=43.07 Aligned_cols=360 Identities=9% Similarity=0.040 Sum_probs=149.3 Q ss_pred cchh------------hHhhccccccccc----------------ccccccccccchhhhhhhhc-C-CCCcccc--hhh Q lcl|Aclame:pro 2 ILPI------------LNFINQTNDPPEV----------------GSVQSYFPDGNDAQIMESLL-G-DNNEWVS--ARA 49 (392) Q Consensus 2 ~Mg~------------~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~-~-~~~~~v~--~~~ 49 (392) +|-| ++.++........ ......+ .+... ...-.. . ..+.... +.. T Consensus 1 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~yY-~g~~~-i~~~~~~~~~~~~~~~~~~~~ 78 (478) T protein:vir:10 1 MISINWPWDKPYHEQVVEQIKPKYETQEEMILRLVREHKENIDNITMGERYY-NHHPD-ILDAPPKRDVNGDYDETKPDW 78 (478) T ss_pred CccccCCCCchhHHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCc-hhccccccccccccccccccc Confidence 1111 1111100000000 0000000 00000 000000 0 0000000 000 Q ss_pred hhcchHHHHHHHHHHHhhhhCceeeeccccc------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEE Q lcl|Aclame:pro 50 ALRNSDLFSIILQLSSDLAIVKINAEKKKNQ------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMK 123 (392) Q Consensus 50 a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~ 123 (392) -+.++-...+|+..+.-+-.-|+.+.-.+.. .++. | ........+..+.+.+|.+|+.+..+.+|++. T Consensus 79 ki~~n~~~~ivd~~~~~l~g~~~~~~~~~d~~~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~~~~d~~g~~~- 152 (478) T protein:vir:10 79 RMYTNYHQNLVDQKVAYAVANPVTFGVDNDKALKQIQHTLN--H---KWDDKLVDILTAASNKGIEWVQPYVDEEGEFK- 152 (478) T ss_pred eeccchHHHHHHHHHhhhccCCeeeecCChHHHHHHHHHHh--c---CHHHHHHHHHHHHHhcCeEEEEEEecCCCeeE- Confidence 1122334456666666555556654322111 1111 2 23445566778889999999999888888764 Q ss_pred EEEeccccceeeecCc-cc-eEEE--EEEecCcceeeeEEEece------------------------------------ Q lcl|Aclame:pro 124 WEYLRPSQVNTYYFEY-EN-GMYY--NITFDDPKIEPILQAPQS------------------------------------ 163 (392) Q Consensus 124 l~~l~~~~v~~~~~~~-~~-~~~~--~~~~~~~~~~~~~~~~~~------------------------------------ 163 (392) +..++|..+.+..+.. .+ ..+. .|...+ ......+.++ T Consensus 153 ~~~~~p~~~~~i~d~~~~~~~~~~v~~~~~~~--~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (478) T protein:vir:10 153 TFRVPAEQAVPIWTNKERDELQAFIRVYELDG--AERVEYWTKDDVTYYELKEGQLIPDFYRSDDHIQPHYYQGNKLMSW 230 (478) T ss_pred EEEEcccceEEEEcCCCCCceEEEEEEEEecC--ceEEEEEeCCeEEEEEEcCCeeeccccccccccccceecccccccC Confidence 6678888888776542 22 1211 111111 0111111222 Q ss_pred ---eEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccC Q lcl|Aclame:pro 164 ---DLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRS 240 (392) Q Consensus 164 ---~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (392) .|++++++ ..|.|.+..+...++....+.....+.++..+.|-.+++.-... +........ .. T Consensus 231 ~~vPvv~~~n~-----~~g~sd~~~v~~liDa~~~~~S~~~~~~~~~~~p~~~~~g~~~~-~~~~~~~~~--------~~ 296 (478) T protein:vir:10 231 GRVPFIPFKNN-----PQEVSDLFMYKTIIDALDKRLSDTQNTFDESVELIYILKGYEGE-DMKDFMHNL--------KY 296 (478) T ss_pred CccceEEeccC-----CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCcc-ccchhhhhh--------hh Confidence 23333332 35788888777777777766655555566556665554432211 111111111 11 Q ss_pred Cceeec--cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 241 GGPVVL--DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISEL 318 (392) Q Consensus 241 g~~~vl--~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l 318 (392) ++++.+ ++|.+++-+........+.+..+...+.|...-++|..-.+..+ ++.+..+.+..+. .+.-.+...+..| T Consensus 297 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~-~n~Sg~Al~~~~~-~l~~k~~~~~~~~ 374 (478) T protein:vir:10 297 YKAISVAGESGSGVDTIKVEVPIDSVKEYTKMLRDYIIEFGQGVDFQQDKFG-NSPSGIALKFMYS-NLDLKANKLKNKT 374 (478) T ss_pred cceEEecCCCCCcceEEeecCChHHHHHHHHHHHHHHHHHhCccccCccccc-cccHHHHHHHHHH-HHHHHHHHHHHHH Confidence 223333 23444444444444556677888888899998898865443222 2222233332221 1111122222222 Q ss_pred HHHh-----------h-----hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc--- Q lcl|Aclame:pro 319 EYKL-----------S-----DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAP--- 376 (392) Q Consensus 319 ~~~l-----------~-----~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~--- 376 (392) ...| + ..+.+.+..-+..+..+.+..+.++ +|+++...+.+++ |+..+ |+.++ T Consensus 375 ~~~l~~~~~li~~~~g~~~~~~~i~i~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l---~~v~D~~~E~~ri~~E 449 (478) T protein:vir:10 375 LTALQELLQYIIDFYRLDVKVQDIEITFNFNVMVNELENSQIAMNS--TGLLSKETILSNH---AWVEDPVAEMERIEQE 449 (478) T ss_pred HHHHHHHHHHHHHHhCCCcccccceEEecCCCCCCHHHHHHHHHHH--hCCCChHHHHHhC---CCCCCHHHHHHHHHHH Confidence 2111 1 1122222222334555666666665 7788887776655 54321 11111 Q ss_pred -----cCCCCCCC---CCCCCCCC Q lcl|Aclame:pro 377 -----ENTNKKTT---GQSNEPVP 392 (392) Q Consensus 377 -----e~~~~~~~---gd~~~p~p 392 (392) +.+..... ++++...+ T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~ 473 (478) T protein:vir:10 450 NIELNQQLPDIEEGLNGEQQRQSE 473 (478) T ss_pred HHHHHhhccccccccCCCCCCCCC Confidence 11111111 11111111 No 195 >protein:vir:78907 Length: 518 # NCBI annotation: gp3 # Family: family:all:4147 # MgeID: mge:1859 # MgeName: A006 # Cross-refs: genbank:acc:YP_001468843;genbank:gi:157325445;genbank:GeneID:5601904 Probab=97.34 E-value=9.1e-05 Score=42.74 Aligned_cols=379 Identities=9% Similarity=0.013 Sum_probs=160.2 Q ss_pred chhhHhhccccc------ccc-----cccccccccccchhhhhhh-hcCCCCcccc---hhhhhcchHHHHHHHHHHHhh Q lcl|Aclame:pro 3 LPILNFINQTND------PPE-----VGSVQSYFPDGNDAQIMES-LLGDNNEWVS---ARAALRNSDLFSIILQLSSDL 67 (392) Q Consensus 3 Mg~~~~~~~~~~------~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~---~~~a~~~~~v~~~i~~ia~~i 67 (392) |||+..+++.-+ +.. ...+.....+.....-... ....++.... ...-++.+....+++.+|+-+ T Consensus 1 ~~~~~~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~~~i~~~~A~ll 80 (518) T protein:vir:78 1 MGVWSVMTRFIKGWLNGKPNGSEPELIPKYLPLVPDNQKEWSKDSYLTSLWAQGYVPTVHDKLMNSGTGNEIVVVAAEYI 80 (518) T ss_pred CcchhhHHHHHHHhhcCCCCccchhccHHHhhhcccchhhhhhhhhhhhhcccCCCCccccccccCChHHHHHHHHHHhh Confidence 888764443211 110 0000000011100000000 0001111111 011123333455677777766 Q ss_pred hhCceee--ecc---ccccccccCCccC---CHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecC- Q lcl|Aclame:pro 68 AIVKINA--EKK---KNQGIIDNPSTNA---NKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFE- 138 (392) Q Consensus 68 a~~p~~~--~~~---~~~~~~~~PN~~~---s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~- 138 (392) ..=+..+ -.. +.......-+... ....-.+..+.+.+-.|.+++.+..+ +|++ .+..+++..+-+.... T Consensus 81 ~~e~~~i~v~~~~~~d~e~~~~~l~~il~~n~f~~~~~~~~e~a~a~G~~~~k~~~d-~~~~-~i~~v~ad~~~P~~~~g 158 (518) T protein:vir:78 81 SGKPLSIDVTGVNGSKDENLTKQLKEALRIDNFDSKSVKIVELAGGSGVSAVKINIL-NGRP-SISVHSSSQFWIDFKNN 158 (518) T ss_pred cCCCceEEecCccccCcHHHHHHHHHHHHhccHHHHHHHHHHHhhccCceEEEEEEE-CCee-EEEEEcCCeeEEEeecC Confidence 4444333 211 1111111111111 11222234455556667777655443 4553 4555666655543211 Q ss_pred --------------ccceEEEEEEe------------------------cCccee---eeE------------------- Q lcl|Aclame:pro 139 --------------YENGMYYNITF------------------------DDPKIE---PIL------------------- 158 (392) Q Consensus 139 --------------~~~~~~~~~~~------------------------~~~~~~---~~~------------------- 158 (392) +.+.+|....+ +....+ ... T Consensus 159 ~~~~~~f~~~~~~~~k~~~y~~lE~he~~~~~~~~~~~~~~~I~n~ly~~~~~~~v~~~~~~~~~~l~~~~~~~~~~e~~ 238 (518) T protein:vir:78 159 EPFRFNFFEEIPTSNKADIYYLVESREIKQWDKEGKKLSGGFVTYSVIKIDGDKTTPISAERLPEQITSYLHTNDIQLNH 238 (518) T ss_pred cEEEEEEEEEeecCCcceeEEEEEeeccccccceeecccceeEEEEEeeecCcccccccccccccccccccccccCccce Confidence 01111110000 000000 000 Q ss_pred ---E-EeceeEEEecCCCc----ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEE-----eCCCCCchHH Q lcl|Aclame:pro 159 ---Q-APQSDLIHMKLLSI----DGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLT-----VKGGGLLSDK 225 (392) Q Consensus 159 ---~-~~~~~vih~~~~~~----~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~-----~~~~~~~~~~ 225 (392) + .+.--+.|+++..+ .+..+|+|.+..+...++..........+-|+.| ++..++. .......... T Consensus 239 ~~~tg~~~~~~~~~~n~~~N~~~~~splG~S~~~~~~~~id~lD~~~s~~~~e~~~g-~~~i~v~~~~l~~~~~~~~~~~ 317 (518) T protein:vir:78 239 SVSIGLKSMGAYLINNSPSNTRYPHLNLGESDLSQCTNYLFAVDYFFTVYMREGEKT-KTKIAASERMFRKKVNKSTDKE 317 (518) T ss_pred eeccCCccceEEeeccccccccccCCCcCcchHhhhhHHHHHHHHHHHHHHHHHHhC-CceeeechhHhccCCCCCCCcc Confidence 0 00111233443221 2345699999999999999888887777777764 4443332 1111000000 Q ss_pred --HHHHHHHHHhccccCCceeeccCCc----eEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccc-cchH-H Q lcl|Aclame:pro 226 --DKASRSRSFMKRSRSGGPVVLDDLE----EFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQ-QSSI-Q 297 (392) Q Consensus 226 --~~~~~~~~~~~~~~~g~~~vl~~g~----~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~-~~~~-~ 297 (392) ....-.+.|..... -.++|. .++.++....+.++.+..+...+.|....|+++..+|..+.. +.++ . T Consensus 318 ~~~fd~~~~~y~~i~~-----~~~~~~~~~~~i~~~~~~Ir~e~~~~~~~~~l~~~~~~~G~s~~tfg~~~~~~TATei~ 392 (518) T protein:vir:78 318 EWSMNVDEDYFMQFKG-----TLDAGAKLNDMIQFMQGDFRDGSYRETMEYFAQKAVSKSGYNPATFNLGNREVKATEIW 392 (518) T ss_pred ccccCCCCceEEEecC-----cCCCCCccccceeeeecccChHHHHHHHHHHHHHHHHhhCCChhhcCcccccccHHHHH Confidence 00000000110000 012222 377888888889999999999999999999999999753222 2221 0 Q ss_pred HHHHHH-------HHHHHHHHHHHHHHHHHHhh------------h--hhcccchhhhhcchHHHHHHHHHHHhCCCcCH Q lcl|Aclame:pro 298 QISGMY-------ASALNRYLRPAISELEYKLS------------D--HISVNMRPAIDPLGDNYLSTISTATRWGALAE 356 (392) Q Consensus 298 ~~~~~~-------~~~l~p~l~~i~~~l~~~l~------------~--~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~ 356 (392) ...+-. +..++..++.+...+-..+. . .+.++...-+..|.++.+..+..++.+|++++ T Consensus 393 s~~~~~~~t~~~~~~~~e~al~~l~~~i~~l~~~~~~~~~~~~~~~~~~v~i~f~D~i~~D~~~~~~~~~~~v~aGimS~ 472 (518) T protein:vir:78 393 SLQDATVRKIEKKKRLIQNVYEQMLWDFLYLLTGGTNNKEKAIMRDEIRVIIEFPDPMSVNLNELSSTLNNMNSALAMSV 472 (518) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEEeCCCCCCCHHHHHHHHHHHHhcCCCCH Confidence 111111 12222222222222211110 0 13344444555677888888888999999999 Q ss_pred HHHHHHHHhCCCCccc----cccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 357 NQATFVLQEAGYIPKD----LPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 357 nE~R~~l~~~g~~~~e----~~~~e~~~~~~~gd~~~p~p 392 (392) .++-+++ ..++...+ +.++.... ..++.++|.| T Consensus 473 e~~i~~~-~~~~~deea~~e~~ri~~E~--~~~~~~~p~~ 509 (518) T protein:vir:78 473 EEKVKLI-HPKWEDEEIQAEVKRIYLEN--AIGEVPDPEA 509 (518) T ss_pred HHHHHHh-CCCCCHHHHHHHHHHHHHHh--cccCCCCCcc Confidence 8876554 12343322 22221111 1112222222 No 196 >protein:vir:4073 Length: 279 # NCBI annotation: minor structural protein # Family: family:all:11744 # MgeID: mge:85 # MgeName: c2 # Cross-refs: genbank:acc:NP_043552;genbank:gi:9628686;genbank:GeneID:1261159 Probab=97.29 E-value=4.4e-06 Score=49.93 Aligned_cols=267 Identities=13% Similarity=0.124 Sum_probs=131.7 Q ss_pred hcchHHHHHHHHHHHhhhhCceeeeccccccccc--------cCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceE Q lcl|Aclame:pro 51 LRNSDLFSIILQLSSDLAIVKINAEKKKNQGIID--------NPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADM 122 (392) Q Consensus 51 ~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~~~~~--------~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~ 122 (392) |+. -.++.-|++++--.+.+.+...+.++- --|...+-..-++.+....+...+.|- +... |--. T Consensus 1 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~ 73 (279) T protein:vir:40 1 MSL----FNLSRRAEDVSFSTFTVQDPTTDLLLGKLLGLVSYFDNVDYSEASKLEDLFYWALQGKEVYR-VWYG--GFKY 73 (279) T ss_pred Ccc----cccchhhcccceeeeeecCcchhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhccceeeh-hhhh--hHHH Confidence 111 122344555555555555554443321 234444443333444433332222221 1000 0000 Q ss_pred EEEEeccccceeeecCccceEEEEEEecCcceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 123 KWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTIS 202 (392) Q Consensus 123 ~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~ 202 (392) ....+.++...... .......+++|-.++..+.++- +|.-+- ....-++++ .....+ T Consensus 74 ~~~~~~~d~fn~~v--------------r~~~~~~vtVP~~Dv~IieNPl-----v~v~~e-e~~kM~~la---~nai~~ 130 (279) T protein:vir:40 74 YAQRVNADQFNIVV--------------REPNRREVTIRTNDYEMLLNPF-----YGANPQ-RFGVMFGMA---SNGIGR 130 (279) T ss_pred HHhhcCcchhhhhe--------------ecCCcceeEeecchhhhhhcch-----heeccc-hhhHHHHHH---Hhhhhh Confidence 00111111111110 0112334555666665554432 343332 222223333 233344 Q ss_pred HHHcCCCcceEEEeCCCCCch---HHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 203 SLNSSLNVPGVLTVKGGGLLS---DKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVY 279 (392) Q Consensus 203 ~~~ng~~~~~il~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~f 279 (392) -+.+.+..+++|+++-+...+ |+.+.+..+....+++-+++.+++.|-++++++.+-.-. ..+-.++.+.+.+..+ T Consensus 131 KLD~~~qIk~fIKTd~d~glee~kekaR~rIk~mlalAk~~nGityid~~ddItQL~kDYSts-lk~die~lkS~l~Sq~ 209 (279) T protein:vir:40 131 RLDSQAQIKIYWKTKVSSGLKEVWDRIRERLTQQQQLAREFNGVSVIGSDDDIKQIQPDYSGS-LQNDANLAIEIALSEY 209 (279) T ss_pred hhcccceeeeEEecCcchhHHHHHHHHHHHHHHHHHHHHhcCCeeeecCCceeEeeccccccc-cHHHHHHHHHHHHhhc Confidence 458888899999988542222 344445555566667678999999999999998654333 3556677788999999 Q ss_pred cccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHH- Q lcl|Aclame:pro 280 GLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQ- 358 (392) Q Consensus 280 gVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE- 358 (392) |||..+|-+ .++.++..+|+..++.|++++++..|... -++ +..-+.+-.++|.+.-.- T Consensus 210 GinekIL~G----sAtE~q~iAyy~rtVePILkQyek~liY~----~E~------------fv~y~ttta~gg~~~s~~~ 269 (279) T protein:vir:40 210 GMPRELLYG----QSNEVTIIAFAIQKVLPLLKQHDKNIIFN----QEN------------FVAYISTTAKGGAIESKSS 269 (279) T ss_pred CCchhhccc----cCchhhhhhHHHhhHHHHHHHhcccccch----hhh------------hhhhheecccCcccccccc Confidence 999999943 45567899999999999999977754321 000 001111212233322211 Q ss_pred HHHHHHhCCCCccc Q lcl|Aclame:pro 359 ATFVLQEAGYIPKD 372 (392) Q Consensus 359 ~R~~l~~~g~~~~e 372 (392) .|. .+|+. +| T Consensus 270 ~~~---~~~~~-~~ 279 (279) T protein:vir:40 270 KRD---SEPVG-ND 279 (279) T ss_pred ccc---CCCCC-CC Confidence 110 11111 22 No 197 >protein:vir:96494 Length: 501 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1620 # MgeName: 2972 # Cross-refs: genbank:acc:YP_238488;genbank:gi:66391764;genbank:GeneID:5176916 Probab=97.20 E-value=0.00013 Score=41.82 Aligned_cols=381 Identities=12% Similarity=0.073 Sum_probs=162.3 Q ss_pred Ccch---hhHhhcccccccc--cccccccccccchhhhhhh-hcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceee Q lcl|Aclame:pro 1 MILP---ILNFINQTNDPPE--VGSVQSYFPDGNDAQIMES-LLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINA 74 (392) Q Consensus 1 m~Mg---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~ 74 (392) +... +.+++........ -......+ .+........ .....+. +..-+.++....+|+..+.-+-.-|+++ T Consensus 37 ~~~~~~~i~~~i~~~~~~~~~r~~~~~~yY-~g~~~~i~~~~~~~~~~~---~~~ri~~n~~k~Ivd~~~~yl~g~p~~~ 112 (501) T protein:vir:96 37 MVNNWELLKNFINHHKLRQAPRIQELLDYA-RGENHDVLKSGRRKDNEM---ADKRAVHNYGRMISKFKTGYLAGNPIRV 112 (501) T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCcccCccccCcccc---ccceeecchHHHHHHHHhhhhcccCeeE Confidence 1111 1122211110000 00000000 0100000000 0000000 0111233444556666666665556655 Q ss_pred ecccc------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCcc-c-eEEE- Q lcl|Aclame:pro 75 EKKKN------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE-N-GMYY- 145 (392) Q Consensus 75 ~~~~~------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~-~-~~~~- 145 (392) .-.+. ...+.+....-........+..+.+.+|.+|.++.++.+|.+. +..++|..+.+..+... + .... T Consensus 113 ~~~~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~v~~dedg~~~-i~~~~p~~~~~v~d~~~~~~~~~~v 191 (501) T protein:vir:96 113 EYDDNDDNSQNDDAIKRIGRINDLDSLNRTLIRDLSQTGRAYEVIYRSEYDETR-IKRLSPLETFVIYDNSLEDNSIAAV 191 (501) T ss_pred eeCCccchhHHHHHHHHHHHhcCHHHHHHHHHHHHhhcCeEEEEEEEcCCCceE-EEEEccceeEEEEcCCCCCceEEEE Confidence 33221 1122333333344556678899999999999999999888765 67788998888776532 2 2111 Q ss_pred E-EEecC--cceeeeEEEeceeEEEecCC----------C---------cccccccCCHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 146 N-ITFDD--PKIEPILQAPQSDLIHMKLL----------S---------IDGGKTGISPLYSLRRESKIQRASDRLTISS 203 (392) Q Consensus 146 ~-~~~~~--~~~~~~~~~~~~~vih~~~~----------~---------~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~ 203 (392) . +.... +.......+.++.+.++... + ......|.|.+..+...++....+.....+. T Consensus 192 ~~~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~d~~~s~~~~~ 271 (501) T protein:vir:96 192 RYYNRGTLQSAKDVVEIYTDEHIYTLDASDDFNEISVTTHAFGTVPITEYLNNIDGIGDYETELYLIDLYDSAESDTANH 271 (501) T ss_pred EEEEeecCCCcEEEEEEEcCCcEEEEeeCCCceeccccccCCCccceEEecCCccCCCchhhhHHHHHHHHHHHHHHHHH Confidence 1 11111 11111112233333322210 0 0011357888888888888777776666666 Q ss_pred HHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccH Q lcl|Aclame:pro 204 LNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPD 283 (392) Q Consensus 204 ~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~ 283 (392) +...+.|-.++.........+................+.....+.+.+++-++....+..+....+...+.|+..-++|. T Consensus 272 ~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~ 351 (501) T protein:vir:96 272 MSDMADAILAIYGDLALPKGMQASDMKRTRLMQLKPPKSADGKEGTVKAEYLTKSYDVSGAEAYKTRLNRDIHIFTNTPD 351 (501) T ss_pred HHHhcCceeeeecccccCcccchhhhhhcCeeeecccccccccccCcceeeEeccCCHHHHHHHHHHHHHHHHHHhCCcc Confidence 66666676655543222221111111111111111111112233444555555444555667778888899999999997 Q ss_pred HHcCCcccccchHHHHHH--------------HHHHHHHHHHHHHHHHHHHHh-h-----hhhcccchhhhhcchHHHHH Q lcl|Aclame:pro 284 SYIGGQGDQQSSIQQISG--------------MYASALNRYLRPAISELEYKL-S-----DHISVNMRPAIDPLGDNYLS 343 (392) Q Consensus 284 ~~lg~~~~~~~~~~~~~~--------------~~~~~l~p~l~~i~~~l~~~l-~-----~~~~~d~~~~~~~~~~~~~~ 343 (392) .-.+..+. +.+..+.+. .+...++..++.+...+...- . ..+++.+..-+..+..+.+. T Consensus 352 ~~~~~~~~-n~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~d~~~i~i~f~~~~p~n~~e~ad 430 (501) T protein:vir:96 352 MSDTNFSG-NTSGEALKYKLFGLDQDRVDTQSQFTKGLKRRYRLAARIGSLVNEFKDFDESLLKITFTPNLPKSLNEQVS 430 (501) T ss_pred cCcccccc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccceEEeCCCCCcCHHHHHH Confidence 66653322 222222221 122222222222222221110 0 01222223333345556666 Q ss_pred HHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc-------------cCCCCC---CCCCCCCCCC Q lcl|Aclame:pro 344 TISTATRWGALAENQATFVLQEAGYIPK---DLPAP-------------ENTNKK---TTGQSNEPVP 392 (392) Q Consensus 344 ~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~-------------e~~~~~---~~gd~~~p~p 392 (392) .+.++ .|+++..-+.+++ |+..+ |+.++ ..+.+. ...+..+..+ T Consensus 431 ~~~kl--~g~iS~et~~~~l---~~v~D~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 493 (501) T protein:vir:96 431 ILTGL--GGQVSQETALSLS---GLVESPNEELDKINKEMSEIDFKGYSNDFNEHVGKYTDEVKETHT 493 (501) T ss_pred HHHHH--hccCchHHHHHhC---CCCCCHHHHHHHHHHHHHHhhccccccchhhcccccCCcCCCCCC Confidence 66666 4778776555544 44321 22111 001111 1111111222 No 198 >protein:vir:8184 Length: 474 # NCBI annotation: gp4 # Family: family:all:524 # MgeID: mge:153 # MgeName: Che9d # Cross-refs: genbank:acc:NP_817977;genbank:gi:29566411;genbank:GeneID:2700965 Probab=97.14 E-value=0.00016 Score=41.46 Aligned_cols=369 Identities=10% Similarity=0.034 Sum_probs=145.9 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhh---hhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARA---ALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) ..=.+++.+.+....-. ....+. .+... . ...+..+..+. ........-||+.+++.+---.|.+-+. T Consensus 19 ~~~~L~~~~~~~~~~~~--~~~~Yy-~G~~~--~----~~~~~~~p~~~r~~~~v~nw~~~~Vd~~a~rl~~~Gf~~~d~ 89 (474) T protein:vir:81 19 LINGLLAQIENLRWKNL--LRTSYY-ENKRT--I----QYVGTLIPPQYFNLGLVLGWTGKAVDALARRCNLEGFVWPDG 89 (474) T ss_pred HHHHHHHHHHHHhhHHH--HHHHHh-ccCCC--h----hhccccccHHHHHHHhhcChHHHHHHHHHhhhcccceECCCC Confidence 11111111111100000 000000 00000 0 00000111110 0011122335555555443233332111 Q ss_pred cc-ccc---cccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCce-EEEEEeccccceeeecCccceEEEEEE---e Q lcl|Aclame:pro 78 KN-QGI---IDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGAD-MKWEYLRPSQVNTYYFEYENGMYYNIT---F 149 (392) Q Consensus 78 ~~-~~~---~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~-~~l~~l~~~~v~~~~~~~~~~~~~~~~---~ 149 (392) +. +.- ..+-|.. ......+..+.+.+|.+|+.+..+.+|.+ ..+.+++|..+...++...+.+..-+. . T Consensus 90 ~~~~~~l~~iw~~N~l---d~~~~~~~~~al~~G~sf~~V~~~~d~~~~~~i~~~sp~~~~~~~D~~~~~~~~al~~~~~ 166 (474) T protein:vir:81 90 DLDSLGGTEVVDDNHL---LSEIDSAIVAAMQHGPAFLINTVGEDDEPEALIHVKDASEATGEWNRRRRGLNNLLSIIDK 166 (474) T ss_pred CccchHHHHHHHhcCh---hHHHHHHHHHHHhhCceeEEEecCCCCCceeEEEEeccceEEEEEeCCCCcceeeeEEEEE Confidence 11 111 1122322 23345677888999999999988777764 456788999888776654443221110 0 Q ss_pred c-CcceeeeEEEecee-------------------------EEEecCCCcccccccCCHH----HHHHHHHHHHHHHHHH Q lcl|Aclame:pro 150 D-DPKIEPILQAPQSD-------------------------LIHMKLLSIDGGKTGISPL----YSLRRESKIQRASDRL 199 (392) Q Consensus 150 ~-~~~~~~~~~~~~~~-------------------------vih~~~~~~~~~~~G~s~~----~~~~~~i~~~~~~~~~ 199 (392) + ++.......+.++. |+++.+...-+..+|.|.+ ..+.+.+.....-... T Consensus 167 ~~~g~~~~~~ly~~~~~~~~~~~~~~~~w~~~~~~~~~gvPvV~~~n~~~~~~~~G~s~i~e~v~~l~da~~r~~~~~~~ 246 (474) T protein:vir:81 167 DKEGKVLSLALYLDNETVTAQRDKATLKWQVDRDEHVYGVPAQVLPYKPAPKRPFGQSRITKPMMGLQDAGVRELARREG 246 (474) T ss_pred cCCCcEEEEEEEeCCcEEEEEEcCccceeeeccCCCCCCcceEEecccccccCcCCccccchhHHHHHHHHHHHHHHHHH Confidence 0 00000001111122 4444444333344677744 3333333333333333 Q ss_pred HHHHHHcCCCcc-eEEEeCCCC-CchHHH-HHHHHH---HHh-ccccCCceeeccCCceEeecccChhhHHHHHHHHHHH Q lcl|Aclame:pro 200 TISSLNSSLNVP-GVLTVKGGG-LLSDKD-KASRSR---SFM-KRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTS 272 (392) Q Consensus 200 ~~~~~~ng~~~~-~il~~~~~~-~~~~~~-~~~~~~---~~~-~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~ 272 (392) ...|+. .|. .++-.+... .+++.. ...|.. ... -..+..+-.....+.++.++....- ..|++..+... T Consensus 247 ~~e~~a---~pqr~i~G~~~~~~~d~d~~~~~~~~~~~~~i~~~~~d~d~~~~~~~~~~~~q~~~a~l-~~~~~~l~~~~ 322 (474) T protein:vir:81 247 HMDVFS---YPEFWLLGADESALKNADGTIKSVWEARLGRIKGLPDDADADIPQLARADVKQFPAASP-DAHWSDINGLA 322 (474) T ss_pred HHHHhc---chhheeecCChhhcccccccccchhhhhHHHHhcCCCcccccccccccccccccCCCCh-hHHHHHHHHHH Confidence 334443 233 333332211 111111 111111 111 1111111112223456666654332 13889999999 Q ss_pred HHHHHHhcccHHHcCCcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------hhh------------ccc Q lcl|Aclame:pro 273 KQYAKVYGLPDSYIGGQG-DQQSSIQQISGMYASALNRYLRPAISELEYKLS----------DHI------------SVN 329 (392) Q Consensus 273 ~~Ia~~fgVP~~~lg~~~-~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l~----------~~~------------~~d 329 (392) ..||..-++|++.+|... .+.++.++++.-. ..+.-.++...+.|...|- ..+ +.- T Consensus 323 ~~~a~~t~iP~~~lG~~~~~np~SaeAi~a~~-~~l~~kae~k~~~fg~~l~~~~rla~~i~~~~~~~~~~~~~~~~~v~ 401 (474) T protein:vir:81 323 KLFAREASLPDTAVAISGLSNPTSAESYDASQ-YELIAEAEGAVDDFTPALRKAFIRALAMKNKVAIDEIPDEWKSIDAK 401 (474) T ss_pred HHHHhhhCCCHHHhcccccccccHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccccchhhccceeE Confidence 999999999999999643 3334444433221 1112222222222222111 001 111 Q ss_pred chhhhhcchHHHHHHHHHHHhCC--CcCHHHHHHHHHhCCCCcccccccc-------------CC-CCCCCCCCCC Q lcl|Aclame:pro 330 MRPAIDPLGDNYLSTISTATRWG--ALAENQATFVLQEAGYIPKDLPAPE-------------NT-NKKTTGQSNE 389 (392) Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g--~~T~nE~R~~l~~~g~~~~e~~~~e-------------~~-~~~~~gd~~~ 389 (392) .......+....+..+.++.++| +....=+++++ |+.+.++.+.+ .+ +...+|...| T Consensus 402 W~d~~~~s~a~~aDa~~Kl~~a~~~~~~~~~~~~~l---g~t~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~aq 474 (474) T protein:vir:81 402 WRDPRYLSKSAQADAGMKQLAAVPWLAETEVGLELI---GLTPQQARRAMADKRRVQGRGTLQALIDRSNNGATAQ 474 (474) T ss_pred ecCCCccCHHHHHHHHHHHHhcccCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCCCCCCC Confidence 11111234455667777888876 33344445554 77665542211 01 1112222222 No 199 >protein:vir:9871 Length: 429 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:177 # MgeName: 315.5 # Cross-refs: genbank:acc:NP_795633;genbank:gi:28876408;genbank:GeneID:1257942 Probab=96.99 E-value=0.00022 Score=40.63 Aligned_cols=362 Identities=9% Similarity=-0.004 Sum_probs=161.6 Q ss_pred CcchhhHhh-ccccccccc-ccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccc Q lcl|Aclame:pro 1 MILPILNFI-NQTNDPPEV-GSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKK 78 (392) Q Consensus 1 m~Mg~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~ 78 (392) |.=-+++.+ ........+ ...... ..+.. .++......... ...-+.++-...+|+..++-+-.-|+.+.-.. T Consensus 1 l~~~~l~~~i~~~~~~~~r~~~l~~y-y~g~~-~il~~~~~~~~~---~~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~~ 75 (429) T protein:vir:98 1 MTKDLLSELIQKHRSFNLSYSAYKQL-YEGDH-AILQQKQKEQYK---PDNRLVVNFAKYIVDTFNGYFIGVPVQTSHEN 75 (429) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-hcccc-ccccccccccCC---CcceeecchHHHHHHHHhhhhcccCceeecCC Confidence 222222211 111100000 000000 00100 000000000000 00112334455677777776656666543222 Q ss_pred c--ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccc--eEEE-EEEecCcc Q lcl|Aclame:pro 79 N--QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN--GMYY-NITFDDPK 153 (392) Q Consensus 79 ~--~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~--~~~~-~~~~~~~~ 153 (392) . ...+.+-............+..+.+.+|.+|.++..+.+|++. +..++|..+.+..++... ..+. ++...... T Consensus 76 ~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~~-~~~~~p~~~~~v~dd~~~~~~~~~i~~~~~~~~ 154 (429) T protein:vir:98 76 KQVSNYLELLDGYNDQDDNNAELSKICSIYGHGYELVFNDENAEAG-ITYLTPLEAFIVYDDSIRQKPLFAVRYFYNKGG 154 (429) T ss_pred hHHHHHHHHHHhhcCHhHHHHHHHHHHhhcCeEEEEEEecCCCcEE-EEEEcccceEEEEeCCCCCceEEEEEEEEecCc Confidence 1 1112211111233445677888899999999999999999864 667888888777654322 1111 11111111 Q ss_pred eeeeEE-------------------------EeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCC Q lcl|Aclame:pro 154 IEPILQ-------------------------APQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSL 208 (392) Q Consensus 154 ~~~~~~-------------------------~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~ 208 (392) ...... +..-.|++++++ ..|.|.+..+...++....+.....+..+..+ T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~-----~~g~sd~e~v~~liD~~d~~~s~~~~~~~~~~ 229 (429) T protein:vir:98 155 VLEGSYSDASNITYFKDGEKGIEIGESEPHPFDGVPMIEYVEN-----EERQSLLASVVTLINAFNKAISEKANDVEYFA 229 (429) T ss_pred eEEEEEEeCceEEEEEecCCceEecccccccCCccceEEecCC-----CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhc Confidence 111111 111223333331 35888888888888877777766666667777 Q ss_pred CcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccC----CceEeecccChhhHHHHHHHHHHHHHHHHHhcccHH Q lcl|Aclame:pro 209 NVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDD----LEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDS 284 (392) Q Consensus 209 ~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~----g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~ 284 (392) .|-.+++--.. .++... ... .++++.+++ +.+++.+........+.+..+...+.|+..-++|.. T Consensus 230 ~p~~~i~g~~~--~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~s~~p~~ 298 (429) T protein:vir:98 230 DAYLKILGAEL--DDETLK-SLR--------DTRIINLKDTDAQQLTVEFLQKPDADATQEHLLDRLENLIFRTAMVANI 298 (429) T ss_pred CceeeeecCCC--Ccchhh-hHh--------hCceeeccCCCCCCcceeEEeecCCHHHHHHHHHHHHHHHHHHhCcccc Confidence 77766653221 111111 111 113333321 223444443344444566778889999999999864 Q ss_pred HcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------h--------hhhcccchhhhhcchHHHHHHH Q lcl|Aclame:pro 285 YIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKL-----------S--------DHISVNMRPAIDPLGDNYLSTI 345 (392) Q Consensus 285 ~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l-----------~--------~~~~~d~~~~~~~~~~~~~~~~ 345 (392) -.+.. ++.+..+.+..+.. +.-.+...+..|...| . ..+++.+...+..+..+.+..+ T Consensus 299 ~~~~~--gn~Sg~Al~~~~~~-l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~d~~~i~v~f~~~~p~~~~~~a~~~ 375 (429) T protein:vir:98 299 SDESF--GTASGIALRYRLQA-MDNLAKTKERKFMSGMNRRYKLIASYPTSKIGPKDWIGIKYKFTRNLPANLLEESQIA 375 (429) T ss_pred Ccccc--ccchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccceEEeCCCCCcCHHHHHHHH Confidence 33322 22233333322221 1111221122221111 0 0122222233334555566666 Q ss_pred HHHHhCCCcCHHHHHHHHHhCCCCcc---cccc--------ccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 346 STATRWGALAENQATFVLQEAGYIPK---DLPA--------PENTNKKTTGQSNEPVP 392 (392) Q Consensus 346 ~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~--------~e~~~~~~~gd~~~p~p 392 (392) .++ +|+++..-+.+++ |+.++ |+.+ .+.......++.++.++ T Consensus 376 ~kl--~g~is~et~~~~l---~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~ 428 (429) T protein:vir:98 376 GNL--AGIVSEETQVGVL---SIVENPQKEIERKNSDKSTLISRQAGGLNGQNTTTIL 428 (429) T ss_pred HHH--hccCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCC Confidence 665 6788886666555 65432 2211 12222233455555555 No 200 >protein:vir:3964 Length: 453 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:83 # MgeName: ul36 # Cross-refs: genbank:acc:NP_663672;genbank:gi:21716109;genbank:GeneID:951201 Probab=96.90 E-value=0.00027 Score=40.15 Aligned_cols=374 Identities=10% Similarity=-0.031 Sum_probs=157.0 Q ss_pred CcchhhH-hhcccccccccc-cccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccc Q lcl|Aclame:pro 1 MILPILN-FINQTNDPPEVG-SVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKK 78 (392) Q Consensus 1 m~Mg~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~ 78 (392) |...++. +++.......+- ....+ ..+........ ....+.. ..-+..+.....|+..+.-+-.-|+.+--.+ T Consensus 17 ~~~~~l~~~i~~~~~~~~r~~~~~~y-y~g~~~i~~~~-~~~~~~~---~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~d 91 (453) T protein:vir:39 17 ITNEVVTKFMEKHRLEVARYEYLKNM-YRGIMAIDAEP-TKDLWKP---DNRLTVNFTKYIVDTFTGYFNGIPVKKSHSD 91 (453) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-hhccCchhcCC-CccccCc---cceeecchHHHHHHHHhhhhcccCceeccCC Confidence 3333332 222211110000 00000 01100000000 0000000 0011223344556666666555565543222 Q ss_pred --cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccce-E-E-EEEEecCcc Q lcl|Aclame:pro 79 --NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENG-M-Y-YNITFDDPK 153 (392) Q Consensus 79 --~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~-~-~-~~~~~~~~~ 153 (392) ....+.+-............+..+.+.+|.+|.++..+.+|.+. +..++|..+.+..++.... + + .++...... T Consensus 92 ~~~~~~l~~i~~~N~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~~-i~~~~p~~~~~v~d~~~~~~~~~~ir~~~~~~~ 170 (453) T protein:vir:39 92 KETLSKLQEFDNLNDMEDEESELAKMACIYGRAFELLYQNEETQTN-VIYNTPENMFMVYDDTIKQEPLFAVRYGYDDDY 170 (453) T ss_pred hHHHHHHHHHHHhcChhHHHHHHHHHHhhcCeEEEEEEecCCCceE-EEEEcccceEEEecCCCCCeEEEEEEEEEeCCe Confidence 11222221111233345567888899999999999999888764 6667888888777653321 1 1 112111111 Q ss_pred eeeeEEEeceeEEEecCCC-----------cc---------cccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE Q lcl|Aclame:pro 154 IEPILQAPQSDLIHMKLLS-----------ID---------GGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGV 213 (392) Q Consensus 154 ~~~~~~~~~~~vih~~~~~-----------~~---------~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~i 213 (392) ......+.++.+.++...+ +. ....|.|.+..+...++....+..-..+.....+.|-.+ T Consensus 171 ~~~~~~yt~~~i~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa~~~~~s~~~~~~~~~~~p~~~ 250 (453) T protein:vir:39 171 KLYGEVYTKETTYALNGTMGFYNMTEQAPNPFDDLPVVEFYFNEERMSIFESVISLVNAFNKAISEKANDVDYFSDQYLT 250 (453) T ss_pred EEEEEEEeCCeEEEEEecCCceeeecccccCCCceeEEEecCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCceee Confidence 1111122333333222110 00 112477888777777766666655555555566667666 Q ss_pred EEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc Q lcl|Aclame:pro 214 LTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ 293 (392) Q Consensus 214 l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~ 293 (392) ++... .+++.. ..+... +.-...+....+++.++..+........+.+..+...+.|+..-++|..-.+.. ++ T Consensus 251 ~~g~~--~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~lt~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~--gn 323 (453) T protein:vir:39 251 FLGAA--VEEEDL-KNIRSN--RVINYYGESSEAKNVDVKFLEKPDSDSQTENLLDRLTKLIFQTTMVANISDESF--GS 323 (453) T ss_pred eecCC--CCchhh-hhhhhc--ceeeecCCCCCCCCCceeEEeecCCHHHHHHHHHHHHHHHHHHhCCcccccccc--cC Confidence 55322 111111 111110 000000000112333444444444455567778888888988888885433222 12 Q ss_pred chHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhh----hhhcccchhhhhcchHHHHHHHHHHHhCCCcC Q lcl|Aclame:pro 294 SSIQQISG--------------MYASALNRYLRPAISELEYKLS----DHISVNMRPAIDPLGDNYLSTISTATRWGALA 355 (392) Q Consensus 294 ~~~~~~~~--------------~~~~~l~p~l~~i~~~l~~~l~----~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T 355 (392) .+..+.+. .+...++..++.+.+.+...-. ..+++.+..-+..+..+.+..+.++ +|+++ T Consensus 324 ~Sg~Al~~~~~~l~~ka~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~~~i~v~f~~~~p~~~~~~a~~~~kl--~g~is 401 (453) T protein:vir:39 324 SSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLYCELSTNVSNKEAWKDIEYTFTRNEPKDIKEQAETANIL--MGITS 401 (453) T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccceEEeCCCCCcCHHHHHHHHHHH--hccCC Confidence 22222222 2222333333322222111100 1223333333334555666666665 67888 Q ss_pred HHHHHHHHHhCCCCcc---ccccc------------cCCCCCCCCCCCCCCC Q lcl|Aclame:pro 356 ENQATFVLQEAGYIPK---DLPAP------------ENTNKKTTGQSNEPVP 392 (392) Q Consensus 356 ~nE~R~~l~~~g~~~~---e~~~~------------e~~~~~~~gd~~~p~p 392 (392) ...+.+++ |+.++ |+.++ +..+...+.++..|.. T Consensus 402 ~et~l~~l---~~v~D~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (453) T protein:vir:39 402 QETALSVI---SVIPDVQAEMEKIKKEEASTAIFDKDKQPSEKGTDTVVPET 450 (453) T ss_pred hHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCc Confidence 87766655 54332 22111 1122223322222222 No 201 >protein:vir:99522 Length: 470 # NCBI annotation: putative protein # Family: family:all:125 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958533;genbank:gi:41179315;genbank:GeneID:2717160 Probab=96.89 E-value=0.00027 Score=40.12 Aligned_cols=371 Identities=8% Similarity=-0.027 Sum_probs=162.6 Q ss_pred chhhHhhccccccccc---ccccccccccchhhhh---------------hhhcCC------CCcccchhhhhcchHHHH Q lcl|Aclame:pro 3 LPILNFINQTNDPPEV---GSVQSYFPDGNDAQIM---------------ESLLGD------NNEWVSARAALRNSDLFS 58 (392) Q Consensus 3 Mg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---------------~~~~~~------~~~~v~~~~a~~~~~v~~ 58 (392) |..+|+-+........ +......+. ....+. .-+-+. .....-+..-+.++-... T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~i~~~~~~~~~~~~~l~~Yy~g~~~i~~~~~~~~~~~~ki~~n~~~~ 79 (470) T protein:vir:99 1 MKDINYGRDKVTGNSSFIFPKGEKLTSN-ELLGFIAYNETVLKPRYRENMKLYLGKHKILTAPEKETGADNRIVVNSAKY 79 (470) T ss_pred CccccCCcccccCCceEEeCCCCCcCHH-HHHHHHHHHHHhhHHHHHHHHHHhccccccccCcccccCCcceeecchHHH Confidence 6665543322211100 000000000 000000 000000 000000111122233445 Q ss_pred HHHHHHHhhhhCceeeeccccc---cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceee Q lcl|Aclame:pro 59 IILQLSSDLAIVKINAEKKKNQ---GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTY 135 (392) Q Consensus 59 ~i~~ia~~ia~~p~~~~~~~~~---~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~ 135 (392) +|+..++-+-.-|+++.-.+.. ..+.+-............+....+.+|.+|.++..+.+|++. +..++|..+.+. T Consensus 80 Ivd~~~~~l~g~p~~~~~~~d~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~~~~~v~~d~dg~~~-i~~~~p~~~~~i 158 (470) T protein:vir:99 80 VVDVYNGYFCGIEPKLALLNDSSKIDEIARWNRQENFFDTINEISKQCDIFGRSIASIYQGEDARPH-LMYSSPNHAFII 158 (470) T ss_pred HHHHHhhhhccCCeeEeeCCchhHHHHHHHHHHhcCHhHHHHHHHHHHHhcCeeEEEEEeCCCCeEE-EEEEccceeEEE Confidence 5555555554446554322211 112222222345566678888999999999999888889874 677899998887 Q ss_pred ecCccce--EE-EEEE-ecCccee--eeEEEeceeEEEecCC-------------C---------cccccccCCHHHHHH Q lcl|Aclame:pro 136 YFEYENG--MY-YNIT-FDDPKIE--PILQAPQSDLIHMKLL-------------S---------IDGGKTGISPLYSLR 187 (392) Q Consensus 136 ~~~~~~~--~~-~~~~-~~~~~~~--~~~~~~~~~vih~~~~-------------~---------~~~~~~G~s~~~~~~ 187 (392) .+..... .+ .++. ....... ....+..+.++++... + ......|.|.+..+. T Consensus 159 ~d~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~ 238 (470) T protein:vir:99 159 YDDTVQRQPLAFVHYQIDNSNNWTDAYGVIQYADKFYKFKGYDIEEDTNAAGYAINPYGLVPAVEFFENEERQGIFDSIK 238 (470) T ss_pred EcCCCCcceEEEEEEEEEecCCeeEEEEEEEecCeEEEEEecccccccccccccccCCCccceEeecCCCCCCcchHhHH Confidence 7665421 11 1111 1111100 0112233333332110 0 001235788888888 Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchH-HHHHHHHHHHhccccCCceeec-----cCCceEeecccChhh Q lcl|Aclame:pro 188 RESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSD-KDKASRSRSFMKRSRSGGPVVL-----DDLEEFTALEIKSNV 261 (392) Q Consensus 188 ~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~vl-----~~g~~~~~l~~~~~d 261 (392) ..++....+.....+.+...+.|-.++..-.....++ +....+. ..+++.+ +++.++..+...... T Consensus 239 ~liDa~~~~~s~~~~~~~~~~~~~~~i~g~~~~~~~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~ 310 (470) T protein:vir:99 239 TLINALDKVISQKANQVEYFDNAYMYMIGFKLPEDDEGNPKFDFK--------NNRVLYVSQLDPDTNPQIGFIAKPDAD 310 (470) T ss_pred HHHHHHHHHHHHHHHHHHHhcCceeeeecCCcccccccchhhhhh--------hcceeeecCCCCCCCCcceEEeecCCh Confidence 8887777766666666666666766655422111111 1111111 1122222 244556666655555 Q ss_pred HHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHH--------------HHHHHHHHHHHHHHHHHHHhh---- Q lcl|Aclame:pro 262 AQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGM--------------YASALNRYLRPAISELEYKLS---- 323 (392) Q Consensus 262 ~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~--------------~~~~l~p~l~~i~~~l~~~l~---- 323 (392) ..+.+..+...+.|+..-++|....+..+. +.+..+.+.. +...++..++.+...+...-. T Consensus 311 ~~~~~~~~~l~~~i~~~s~~p~~~~~~~~~-n~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~ 389 (470) T protein:vir:99 311 QMQENLIQHLTDFIFMMAMVPNIQDKNFAG-NSSGVALQYKLFAMKNKADSKERKFDKSLMQLYRIVLATLFNNKQDQEL 389 (470) T ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccc-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccc Confidence 556677888899999999999765543222 2222232221 222222222222222211110 Q ss_pred -hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCC-cc-cccccc------------CCCCC-----C Q lcl|Aclame:pro 324 -DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYI-PK-DLPAPE------------NTNKK-----T 383 (392) Q Consensus 324 -~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~-~~-e~~~~e------------~~~~~-----~ 383 (392) ..+++.+..-+..+..+.+..+..+ .|+++...+.+++ |+. |. |+.++. ...+. . T Consensus 390 ~~~i~v~f~~~~p~~~~e~a~~~~kl--~giis~et~l~~l---~~vd~~~E~eri~~E~~~~~~~~~~~~~~~d~~~~d 464 (470) T protein:vir:99 390 WSELDFKFTRNLPEDMASAIDNAKNA--EGIVSKKTQLGMI---PDIEPDAEMKQIAKEKADAIKQTQQLSMPIDILKRD 464 (470) T ss_pred cccceEEeCCCCCcCHHHHHHHHHHH--hccCCHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCC Confidence 1122222333334555666666665 3788887666654 432 22 111110 01111 1 Q ss_pred CCCCCC Q lcl|Aclame:pro 384 TGQSNE 389 (392) Q Consensus 384 ~gd~~~ 389 (392) ++++.+ T Consensus 465 ~~~ee~ 470 (470) T protein:vir:99 465 NNAEEE 470 (470) T ss_pred CCccCC Confidence 112222 No 202 >protein:vir:94546 Length: 506 # NCBI annotation: minor head protein # Family: family:all:125 # MgeID: mge:1510 # MgeName: phiJL-1 # Cross-refs: genbank:acc:YP_223886;genbank:gi:62327098;genbank:GeneID:5075562 Probab=96.84 E-value=0.00031 Score=39.86 Aligned_cols=378 Identities=10% Similarity=-0.002 Sum_probs=148.1 Q ss_pred CcchhhHhhccccccccc---------------------cccc--ccccccchhhhhhhhcCCCCcccchhhhhcchHHH Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEV---------------------GSVQ--SYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLF 57 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~---------------------~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~ 57 (392) |--.|.++......-+.. ..+. .....+....+....... ....-+..-+..+... T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~li~~~~~~~~~r~~~l~~YY~g~~~~i~~~~~~~-~~~~~~~~ki~~n~~~ 79 (506) T protein:vir:94 1 MDYDLTEHKQANLIYQESLENLTPNKIMKFITHHFNYQRPRLEMLDDYYQGYNLKILDKQSRR-HEDGKADHRATHSFAK 79 (506) T ss_pred CCcchhhhhcceeecccchhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccc-ccccCCcceeecchHH Confidence 322322222111100000 0000 000000000000000000 0000011112234445 Q ss_pred HHHHHHHHhhhhCceeeeccc--cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceee Q lcl|Aclame:pro 58 SIILQLSSDLAIVKINAEKKK--NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTY 135 (392) Q Consensus 58 ~~i~~ia~~ia~~p~~~~~~~--~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~ 135 (392) ..|+..++-+-.-|+++.-.+ ....+.+=+...........+..+.+.+|.+|.++..+.+|++. +..++|..+-+. T Consensus 80 ~Iv~~~~~~l~G~p~~~~~~d~~~~~~l~~~~~~N~~~~~~~~~~~~~~~~G~a~~~v~~ded~~~~-i~~~~p~~~~~v 158 (506) T protein:vir:94 80 YIADFQTSYSVGNPINVKLPDDGSNSGFDTFNKANDVDAENYDLFLDMSRYGRAYEYVYRGEDNEEH-LAKLDPLDTFVI 158 (506) T ss_pred HHHHHhhhhhcccCceeecCcchHHHHHHHHHhccCHhHHHHHHHHHHHhcCeEEEEEEecCCCeeE-EEEEcccceEEE Confidence 556666655544455443221 11112111111233344566788888999999999988888764 666888888877 Q ss_pred ecCccc--eEEE-E-EEe--c-Cccee----eeEEEecee-------------------------EEEecCCCccccccc Q lcl|Aclame:pro 136 YFEYEN--GMYY-N-ITF--D-DPKIE----PILQAPQSD-------------------------LIHMKLLSIDGGKTG 179 (392) Q Consensus 136 ~~~~~~--~~~~-~-~~~--~-~~~~~----~~~~~~~~~-------------------------vih~~~~~~~~~~~G 179 (392) .++... .++. + +.. . ..... ....+.... |++++++ ..| T Consensus 159 ~dd~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~yt~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~-----~~~ 233 (506) T protein:vir:94 159 YSTDVDPKPIMAVRYHQIELVDDNQVSTINYVPETWTADTYTLYNPTPIMGKMQVDTTKPITTFPVVEFKNS-----NFR 233 (506) T ss_pred ecCCCCCceEEEEEEEeeeeccCCceeEEEEEEEEEeCceEEEeccccCccceeccccccCCccceEEecCC-----CCC Confidence 654321 1111 0 000 0 00000 000112222 2333221 235 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCC--------------------CCchH---HHHHHHHH-HHh Q lcl|Aclame:pro 180 ISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGG--------------------GLLSD---KDKASRSR-SFM 235 (392) Q Consensus 180 ~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~--------------------~~~~~---~~~~~~~~-~~~ 235 (392) .|.+......++....+.....+..+....|-.+++.... ....+ +..+.... ... T Consensus 234 ~sd~e~~~~liDa~d~~~S~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (506) T protein:vir:94 234 LGDFENVLPLIDLYDAAQSDTANYMTDLNEAMLIIQGDIDTLFEGSDMMNTIDPNDEDAMAKLAKDKLELIKEMKDANML 313 (506) T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCccccccchhccccccccccccccccccchhHHHhhhhhcCee Confidence 6666666655555544433333322222222222221000 00000 01111111 011 Q ss_pred ccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHH--------------HH Q lcl|Aclame:pro 236 KRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQI--------------SG 301 (392) Q Consensus 236 ~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~--------------~~ 301 (392) .....+.+...+.+.+++-+..+..+..+....+...+.|...-++|..-.+..+ ++.+..+. +. T Consensus 314 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~~-~n~Sg~Aik~~~~~l~~k~~~k~~ 392 (506) T protein:vir:94 314 LLKSGMTVNGTQTSVDAKYINKTYDVVGSEAYKKRVAGDIHKFSHTPDLTDENFA-SNSSGVAMQYKVLGTVELASTKRR 392 (506) T ss_pred eecccccccCccccccceeeeecCCHHHHHHHHHHHHHHHHHHhCcccccccccc-ccchHHHHHHHHHHHHHHHHHHHH Confidence 1111122222233445555665556666778888899999999999975432211 12222222 22 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh-------hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc--- Q lcl|Aclame:pro 302 MYASALNRYLRPAISELEYKLSD-------HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK--- 371 (392) Q Consensus 302 ~~~~~l~p~l~~i~~~l~~~l~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~--- 371 (392) .+...++..++.+.+.+... .. .+++.+..-+..+..+.+..+.++ .|+++...+++++ |+..+ T Consensus 393 ~~~~~l~~~~~li~~~~~~~-~~~~~~d~~~i~i~f~~~~p~d~~e~a~~~~kl--~g~iS~et~~~~l---p~v~d~~~ 466 (506) T protein:vir:94 393 MFERGLYARYQIISDIENSI-HGDWTFDPQELTFTFRDNLPADNISQIKALVQA--GATLPQKYLYQQL---PGVTNPQD 466 (506) T ss_pred HHHHHHHHHHHHHHHHHHhc-CCccccccccceEEeCCCCCcCHHHHHHHHHHH--hccCChHHHHHhC---CCCCCHHH Confidence 33334444444444333211 11 122223333334555666666665 5899998887765 54332 Q ss_pred ccccc-------cCCCCCCCCCCCCCCC Q lcl|Aclame:pro 372 DLPAP-------ENTNKKTTGQSNEPVP 392 (392) Q Consensus 372 e~~~~-------e~~~~~~~gd~~~p~p 392 (392) |+.++ +......+++..+..+ T Consensus 467 E~~ri~~E~~~~~~~~~~~~~~~~~~~~ 494 (506) T protein:vir:94 467 IVDMMKEQSANGDYSFDQNGVISNDGQT 494 (506) T ss_pred HHHHHHHHHHHHhhcchhhcCCCcccCc Confidence 21111 0000011111111112 No 203 >protein:vir:97171 Length: 512 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1654 # MgeName: 85 # Cross-refs: genbank:acc:YP_239722;genbank:gi:66394876;genbank:GeneID:5130904 Probab=96.80 E-value=0.00033 Score=39.68 Aligned_cols=380 Identities=8% Similarity=0.011 Sum_probs=162.7 Q ss_pred Ccchhh-Hhhccccccc--ccccccccccccchhhhhhhhc-CCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeec Q lcl|Aclame:pro 1 MILPIL-NFINQTNDPP--EVGSVQSYFPDGNDAQIMESLL-GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEK 76 (392) Q Consensus 1 m~Mg~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~ 76 (392) +.+..+ +++.+..... .-....... .+...-....-. ..... +..-+..+-..-.|+..++-+-.-|+.+-- T Consensus 40 ~~~~~i~~~i~~~~~~~~~r~~~l~~YY-~g~~~i~~~~~~~~~~~~---~~~ki~~n~~k~Ivd~~~~yl~g~p~~~~~ 115 (512) T protein:vir:97 40 QNINEVSKYIEHHMDYQRPRLKVLSDYY-EGKTKNLVELTRRKEEYM---ADNRVAHDYASYISDFINGYFLGNPIQCQD 115 (512) T ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHh-cccCccccccCccccccc---CcceeecchHHHHHHHHhhhhcccCceecc Confidence 222222 2222111000 000000000 000000000000 00000 000111233344566666666566666532 Q ss_pred ccc--ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCcc--ceEEE-EE-Eec Q lcl|Aclame:pro 77 KKN--QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE--NGMYY-NI-TFD 150 (392) Q Consensus 77 ~~~--~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~--~~~~~-~~-~~~ 150 (392) .+. ...+.+=+..-........+..+.+.+|.+|.++.++.+|.+. +..++|..+.+..+... ...+. ++ ... T Consensus 116 ~d~~~~~~l~~~~~~n~~~~~~~~~~~~~~i~G~ay~~vy~ded~~~~-i~~~~p~~~~~iyd~~~~~~~~~~vr~~~~~ 194 (512) T protein:vir:97 116 DDKDVLEAIEAFNDLNDVESHNRSLGLDLSIYGKAYELMIRNQDDETR-LYKSDAMSTFVIYDNTIERNSIAGVRYLRTK 194 (512) T ss_pred CChHHHHHHHHHHhhcCHHHHHHHHHHHHHhcCeEEEEEEeCCCCceE-EEEEcccceEEEEcCCCCCceEEEEEEEEee Confidence 221 1122222222234445567888899999999999998888764 67889998888776543 11111 11 110 Q ss_pred --Cc-c---eeeeEEEeceeEEEecCCCc-------------------------ccccccCCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 --DP-K---IEPILQAPQSDLIHMKLLSI-------------------------DGGKTGISPLYSLRRESKIQRASDRL 199 (392) Q Consensus 151 --~~-~---~~~~~~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~~~~~~~ 199 (392) .+ . ......+.+..+.++..... .....|.|.+..+...++....+..- T Consensus 195 ~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~gd~e~v~~liDa~d~~~S~ 274 (512) T protein:vir:97 195 PIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAESD 274 (512) T ss_pred eccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcccceEeecCCCCCCCchhhhHHHHHHHHHHHHH Confidence 00 0 00111334444444321100 00134788888888888777777666 Q ss_pred HHHHHHcCCCcceEEEeCCCCCchHHHHHHHHH---HHhccc--cCCceeeccCCceEeecccChhhHHHHHHHHHHHHH Q lcl|Aclame:pro 200 TISSLNSSLNVPGVLTVKGGGLLSDKDKASRSR---SFMKRS--RSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQ 274 (392) Q Consensus 200 ~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~---~~~~~~--~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~ 274 (392) ..+.+...+.|-.+++........+ ....... ...... +.....-.++|.+++-+........+....+...+. T Consensus 275 ~~~~~~~~~~~~lv~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~e~~~~~L~~~ 353 (512) T protein:vir:97 275 TANYMSDLNDAMLLIKGNLNLDPVE-VRKQKEANVLFLEPTVYENRDTGIETEGSVDGGYIYKQYDVQGTEAYKDRLNSD 353 (512) T ss_pred HHHHHHHhcCceeeeecCccCCchh-hhhhhhcccccccccchhhcccccCCCCCcceEEEeecCCHHHHHHHHHHHHHH Confidence 6666666666766655432222221 1111100 000111 111111234566666666554555566778888899 Q ss_pred HHHHhcccHHHcCCcccccchHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhh-------hhhcccchhh Q lcl|Aclame:pro 275 YAKVYGLPDSYIGGQGDQQSSIQQISG--------------MYASALNRYLRPAISELEYKLS-------DHISVNMRPA 333 (392) Q Consensus 275 Ia~~fgVP~~~lg~~~~~~~~~~~~~~--------------~~~~~l~p~l~~i~~~l~~~l~-------~~~~~d~~~~ 333 (392) |+..-++|..-.+..+ ++.+..+.+. .+...+.-.++.|...+...-. ..+++.+..- T Consensus 354 I~~~s~~p~~~~~~~~-gn~Sg~Al~~~~~~l~~ka~~k~~~f~~~l~~~~~li~~~~~~~~~~~~~~d~~~i~~~f~~~ 432 (512) T protein:vir:97 354 IHMFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKDFNTVRYVYNRN 432 (512) T ss_pred HHHHhCCcccCccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccceEEeCCC Confidence 9999999887654322 2222223221 1222222222222222221100 0122222222 Q ss_pred hhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccccc------------CCCC-CCCCCCCCCCC Q lcl|Aclame:pro 334 IDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAPE------------NTNK-KTTGQSNEPVP 392 (392) Q Consensus 334 ~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~e------------~~~~-~~~gd~~~p~p 392 (392) +..+..+.+..+.++ .|+++..-+.++| |+.++ |+.+++ .... ..+++..++.+ T Consensus 433 ~p~~~~e~~~~~~kl--~giiS~et~~~~l---~~v~d~~~E~eri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (512) T protein:vir:97 433 LPKSLIEELKAYIDS--GGKISQTTLMSLF---SFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDDEQDD 502 (512) T ss_pred CCcCHHHHHHHHHHH--hccCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCC Confidence 233445556666665 5888887666655 54321 221110 0111 11222233333 No 204 >protein:vir:95899 Length: 474 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1588 # MgeName: 71 # Cross-refs: genbank:acc:YP_240382;genbank:gi:66396046;genbank:GeneID:5133410 Probab=96.78 E-value=0.00035 Score=39.56 Aligned_cols=367 Identities=10% Similarity=0.010 Sum_probs=152.9 Q ss_pred CcchhhHhhcccccccccccccccccccchhhh-hhhhcCCCCc--ccchhhhhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQI-MESLLGDNNE--WVSARAALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) +.-.+.+....+...-. .... ...+...-. ........+. ..-+..-+.++-....|+..++-+-.-|+.+--. T Consensus 31 ~i~~~i~~~~~~~~~~~--~l~~-Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~ 107 (474) T protein:vir:95 31 MIIRLINNHKQKLKDIN--VGQK-YYDKDNDINYQAYKQDLHGNIDYTKPDWRITTNFHQNLVDQKVSYVAGKPVTYAHD 107 (474) T ss_pred HHHHHHHHHHHHHHHHH--HHHH-HhcccCccccccchhhhcccccccccccccccchHHHHHHhhhhhhcccCceeccC Confidence 11111110000000000 0000 000000000 0000000000 0000000112333445555665555556654322 Q ss_pred ccc------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCc--cceEEEEEEe Q lcl|Aclame:pro 78 KNQ------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEY--ENGMYYNITF 149 (392) Q Consensus 78 ~~~------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~--~~~~~~~~~~ 149 (392) +.. .++. | ........+..+.+.+|.+|.++.++.+|.+ .+..++|..+-+..+.. +..+.....+ T Consensus 108 ~~~~~~~l~~~~~--n---~~~~~~~~l~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~~~~~~~a~ir~~ 181 (474) T protein:vir:95 108 DDKVLDVIHQVLD--T---RWDNKLIDILTAASNKGIDWLQVYINEDGEL-KLFRVPAEQAIPIWTDKEREQLNAFIRIF 181 (474) T ss_pred ChHHHHHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEeeeCCCCce-EEEEEcccceEEEEcCCCCCceEEEEEEE Confidence 211 1111 2 2334445678889999999999988888876 46678888888776543 1211111111 Q ss_pred cCcceeeeEEEeceeEEEecCCC---------------------c---------ccccccCCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 150 DDPKIEPILQAPQSDLIHMKLLS---------------------I---------DGGKTGISPLYSLRRESKIQRASDRL 199 (392) Q Consensus 150 ~~~~~~~~~~~~~~~vih~~~~~---------------------~---------~~~~~G~s~~~~~~~~i~~~~~~~~~ 199 (392) ..........+.+..+.++.... . .....|.|.+......++....+..- T Consensus 182 ~~~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~~~~d~e~v~~liDa~d~~~S~ 261 (474) T protein:vir:95 182 TFNGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFKNNPEEVSDIWMYKSFVDAIDKRLSD 261 (474) T ss_pred eecCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEecCCCCCCCchHHHHHHHHHHHHHHHH Confidence 11111112223333333332100 0 01134778887777777776666555 Q ss_pred HHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 200 TISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVY 279 (392) Q Consensus 200 ~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~f 279 (392) ..+.+...+.|-.+++.-.. .+....... .+..+++.++++.+++-+.....+..+.+..+...+.|...- T Consensus 262 ~~~~~~~~~~p~lv~~g~~~-~~~~~~~~~--------~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s 332 (474) T protein:vir:95 262 VQNMFDESVELIYILRGYEG-EDLSEFMEG--------LKYYKAINVSSDGGVETIQVEVPVASTKEYLDMMRAYIVEFG 332 (474) T ss_pred HHHHHHHhhcchhhhcCCCc-ccccchhhh--------hhccceeeccCCCceeEEeccCCHHHHHHHHHHHHHHHHHHh Confidence 55555555556555443211 111111111 122346666666666666555556667778888889999999 Q ss_pred cccHHHcCCcccccchHHHHHHH--------------HHHHHHHHHHHHHHHHHHHhh-hhhcccchhhhhcchHHHHHH Q lcl|Aclame:pro 280 GLPDSYIGGQGDQQSSIQQISGM--------------YASALNRYLRPAISELEYKLS-DHISVNMRPAIDPLGDNYLST 344 (392) Q Consensus 280 gVP~~~lg~~~~~~~~~~~~~~~--------------~~~~l~p~l~~i~~~l~~~l~-~~~~~d~~~~~~~~~~~~~~~ 344 (392) ++|..-....+ ++.+..+.+.. +...+...++.+.+.+..... .++.+.+.. .......+. T Consensus 333 ~~p~~~~~~~~-~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~g~~~d~~~i~i~f~~---~~p~~~~e~ 408 (474) T protein:vir:95 333 QGVDFQTDKFG-SATSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDFNKIKLDAKEIEITFNF---NVMVNDLEQ 408 (474) T ss_pred CCcCccccccc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccceeeEEecC---CCccCHHHH Confidence 99865443222 22222333222 111222222211111110000 111222111 222333444 Q ss_pred HHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc--------cCCCCCCCC----CCCCCCC Q lcl|Aclame:pro 345 ISTATRWGALAENQATFVLQEAGYIPK---DLPAP--------ENTNKKTTG----QSNEPVP 392 (392) Q Consensus 345 ~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~--------e~~~~~~~g----d~~~p~p 392 (392) ++.+.++|+++...+.+++ |+..+ |+.++ ..+....++ +.++-.| T Consensus 409 a~~~~~~giiS~et~~~~l---p~v~D~~~E~eri~~E~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (474) T protein:vir:95 409 SQIGAQSQYLSKETLVRHH---PWVDDPKAELERLDEEQLELNKQLPNLDDGGADGAQQQQQS 468 (474) T ss_pred HHHHHHcCCCChHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhhccccccccCCCCCCcCCC Confidence 5556678999988777655 55332 22111 112222211 1111111 No 205 >protein:vir:96266 Length: 474 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1612 # MgeName: ROSA # Cross-refs: genbank:acc:YP_240308;genbank:gi:66395972;genbank:GeneID:5133343 Probab=96.78 E-value=0.00035 Score=39.56 Aligned_cols=367 Identities=10% Similarity=0.010 Sum_probs=152.9 Q ss_pred CcchhhHhhcccccccccccccccccccchhhh-hhhhcCCCCc--ccchhhhhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQI-MESLLGDNNE--WVSARAALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) +.-.+.+....+...-. .... ...+...-. ........+. ..-+..-+.++-....|+..++-+-.-|+.+--. T Consensus 31 ~i~~~i~~~~~~~~~~~--~l~~-Yy~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~ 107 (474) T protein:vir:96 31 MIIRLINNHKQKLKDIN--VGQK-YYDKDNDINYQAYKQDLHGNIDYTKPDWRITTNFHQNLVDQKVSYVAGKPVTYAHD 107 (474) T ss_pred HHHHHHHHHHHHHHHHH--HHHH-HhcccCccccccchhhhcccccccccccccccchHHHHHHhhhhhhcccCceeccC Confidence 11111110000000000 0000 000000000 0000000000 0000000112333445555665555556654322 Q ss_pred ccc------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCc--cceEEEEEEe Q lcl|Aclame:pro 78 KNQ------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEY--ENGMYYNITF 149 (392) Q Consensus 78 ~~~------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~--~~~~~~~~~~ 149 (392) +.. .++. | ........+..+.+.+|.+|.++.++.+|.+ .+..++|..+-+..+.. +..+.....+ T Consensus 108 ~~~~~~~l~~~~~--n---~~~~~~~~l~~~~~~~G~~~~~~~~d~~~~~-~i~~~~p~~~~~v~d~~~~~~~~a~ir~~ 181 (474) T protein:vir:96 108 DDKVLDVIHQVLD--T---RWDNKLIDILTAASNKGIDWLQVYINEDGEL-KLFRVPAEQAIPIWTDKEREQLNAFIRIF 181 (474) T ss_pred ChHHHHHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEeeeCCCCce-EEEEEcccceEEEEcCCCCCceEEEEEEE Confidence 211 1111 2 2334445678889999999999988888876 46678888888776543 1211111111 Q ss_pred cCcceeeeEEEeceeEEEecCCC---------------------c---------ccccccCCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 150 DDPKIEPILQAPQSDLIHMKLLS---------------------I---------DGGKTGISPLYSLRRESKIQRASDRL 199 (392) Q Consensus 150 ~~~~~~~~~~~~~~~vih~~~~~---------------------~---------~~~~~G~s~~~~~~~~i~~~~~~~~~ 199 (392) ..........+.+..+.++.... . .....|.|.+......++....+..- T Consensus 182 ~~~~~~~~~vy~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~~~~d~e~v~~liDa~d~~~S~ 261 (474) T protein:vir:96 182 TFNGETKVEYWTAETVTYYVYENGGLIPDFYYGDEHIQTHFSTGSWERVPFIAFKNNPEEVSDIWMYKSFVDAIDKRLSD 261 (474) T ss_pred eecCeeEEEEEeCCeEEEEEEcCCceeeccccccccccCcccccCCCccceEEecCCCCCCCchHHHHHHHHHHHHHHHH Confidence 11111112223333333332100 0 01134778887777777776666555 Q ss_pred HHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHh Q lcl|Aclame:pro 200 TISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVY 279 (392) Q Consensus 200 ~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~f 279 (392) ..+.+...+.|-.+++.-.. .+....... .+..+++.++++.+++-+.....+..+.+..+...+.|...- T Consensus 262 ~~~~~~~~~~p~lv~~g~~~-~~~~~~~~~--------~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s 332 (474) T protein:vir:96 262 VQNMFDESVELIYILRGYEG-EDLSEFMEG--------LKYYKAINVSSDGGVETIQVEVPVASTKEYLDMMRAYIVEFG 332 (474) T ss_pred HHHHHHHhhcchhhhcCCCc-ccccchhhh--------hhccceeeccCCCceeEEeccCCHHHHHHHHHHHHHHHHHHh Confidence 55555555556555443211 111111111 122346666666666666555556667778888889999999 Q ss_pred cccHHHcCCcccccchHHHHHHH--------------HHHHHHHHHHHHHHHHHHHhh-hhhcccchhhhhcchHHHHHH Q lcl|Aclame:pro 280 GLPDSYIGGQGDQQSSIQQISGM--------------YASALNRYLRPAISELEYKLS-DHISVNMRPAIDPLGDNYLST 344 (392) Q Consensus 280 gVP~~~lg~~~~~~~~~~~~~~~--------------~~~~l~p~l~~i~~~l~~~l~-~~~~~d~~~~~~~~~~~~~~~ 344 (392) ++|..-....+ ++.+..+.+.. +...+...++.+.+.+..... .++.+.+.. .......+. T Consensus 333 ~~p~~~~~~~~-~n~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~~g~~~d~~~i~i~f~~---~~p~~~~e~ 408 (474) T protein:vir:96 333 QGVDFQTDKFG-SATSGIALKFLYTNLNLKANKLKNKANVALQELMQFILDFNKIKLDAKEIEITFNF---NVMVNDLEQ 408 (474) T ss_pred CCcCccccccc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccceeeEEecC---CCccCHHHH Confidence 99865443222 22222333222 111222222211111110000 111222111 222333444 Q ss_pred HHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc--------cCCCCCCCC----CCCCCCC Q lcl|Aclame:pro 345 ISTATRWGALAENQATFVLQEAGYIPK---DLPAP--------ENTNKKTTG----QSNEPVP 392 (392) Q Consensus 345 ~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~--------e~~~~~~~g----d~~~p~p 392 (392) ++.+.++|+++...+.+++ |+..+ |+.++ ..+....++ +.++-.| T Consensus 409 a~~~~~~giiS~et~~~~l---p~v~D~~~E~eri~~E~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (474) T protein:vir:96 409 SQIGAQSQYLSKETLVRHH---PWVDDPKAELERLDEEQLELNKQLPNLDDGGADGAQQQQQS 468 (474) T ss_pred HHHHHHcCCCChHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhhccccccccCCCCCCcCCC Confidence 5556678999988777655 55332 22111 112222211 1111111 No 206 >protein:vir:102950 Length: 471 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1461 # MgeName: EJ-1 # Cross-refs: genbank:acc:NP_945279;genbank:gi:39653714;interpro:IPR006428;uniprot:Q708N3;genbank:GeneID:2672864 Probab=96.43 E-value=0.00064 Score=38.11 Aligned_cols=369 Identities=11% Similarity=0.017 Sum_probs=151.1 Q ss_pred CcchhhH-----hhcccccccccc-cccccccccchh----------h--hhhhhcCCCCcccchhhhhcchHHHHHHHH Q lcl|Aclame:pro 1 MILPILN-----FINQTNDPPEVG-SVQSYFPDGNDA----------Q--IMESLLGDNNEWVSARAALRNSDLFSIILQ 62 (392) Q Consensus 1 m~Mg~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~----------~--~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ 62 (392) |..-+.. ++.+......+- ...... .+... . ....... ......+..-+.++-....|+. T Consensus 1 ~~~e~~~~~i~~~~~~~~~~~~~~~~~~~Yy-~g~hdi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ki~~n~~~~Ivd~ 78 (471) T protein:vir:10 1 MEIEVIKKIISSQMVKHGKFVSQAAEAEKYY-RNENDIKRKRKPADKKGAENEAKAE-DNAFRNADNRISHNWHQLLLDQ 78 (471) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccccccccchhhhhccccccccc-ccccccccceeccchhHHHHHh Confidence 3332221 111000000000 000000 00000 0 0000000 0000000111223334445555 Q ss_pred HHHhhhhCceeeeccccc--ccc---ccCCccCCHHHHHHHHHHHHHHhCCeeEEEeecc-CCceEEEEEeccccceeee Q lcl|Aclame:pro 63 LSSDLAIVKINAEKKKNQ--GII---DNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNA-NGADMKWEYLRPSQVNTYY 136 (392) Q Consensus 63 ia~~ia~~p~~~~~~~~~--~~~---~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~-~G~~~~l~~l~~~~v~~~~ 136 (392) .++-+-.-|+.+.-.+.. ..+ .. |. .......+...+..+|.+|.++.++. +|++ .+..++|..+-+.. T Consensus 79 ~~~yl~G~p~~~~~~~~~~~~~l~~~~~-n~---~~~~~~~~~~~~~~~G~~~~~v~~d~~~g~~-~~~~~~p~~~~~i~ 153 (471) T protein:vir:10 79 KKAYALTYPPTFDVDDKKVNDMIVDVLG-DD---YERISKQLCVNAGNAGIAWLHVWKDASDNSF-RYACVDSKEVIPIY 153 (471) T ss_pred hhhhhcccCceeccCChHHHHHHHHHHh-cC---HHHHHHHHHHHHhhCCeEEEEEEeeCCCCee-EEEEEcccceEEEE Confidence 555555556554322211 111 11 22 23334567788899999999998875 5654 57778998888777 Q ss_pred cCccc--eEEE--EEEec---Ccc-eeeeEEEeceeEEEecCCC-------------------------------cc--- Q lcl|Aclame:pro 137 FEYEN--GMYY--NITFD---DPK-IEPILQAPQSDLIHMKLLS-------------------------------ID--- 174 (392) Q Consensus 137 ~~~~~--~~~~--~~~~~---~~~-~~~~~~~~~~~vih~~~~~-------------------------------~~--- 174 (392) ++... ..+. .+... +.. ......+.+..+.|+.... .. T Consensus 154 d~~~~~~~~~~ir~~~~~~~~~~~~~~~~~vy~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 233 (471) T protein:vir:10 154 SKSLDKKSIGVLRVYSSIDETDGKNYTVYEYWNDKECSFYRHEKEKPLEELETFQAISLIDTMNGDRSSDNSFKHDFGLV 233 (471) T ss_pred cCCCCCceEEEEEEEEeeccCCCceeEEEEEEeCCcEEEEEecCCcccccccccccccccccccccccccccccCCCCce Confidence 65432 2111 11111 111 1111122333444332110 00 Q ss_pred ------cccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeecc- Q lcl|Aclame:pro 175 ------GGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLD- 247 (392) Q Consensus 175 ------~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~- 247 (392) ....|.|.+......++....+.....+.++..+.|-.+++.-...... +...... .++.+.+. T Consensus 234 Pvv~~~n~~~~~sd~e~v~~liDa~d~~~S~~~~~~~~~~~~~lv~~g~~~~~~~-~~~~~~~--------~~~~i~~~~ 304 (471) T protein:vir:10 234 PFIPFKNNEIETNDLKPIKDLVDVYDKVFSGFVNDTDDVQEVIFVLTNYGGQDKQ-EFLEDLK--------RYKMIKMDN 304 (471) T ss_pred eEEEeccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCceeeeecCCccccc-hhHHHhh--------cCCeEEecC Confidence 0123677787777777777666555555556555665554432221111 1111111 11222221 Q ss_pred ----CCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHH--------------HHHHHH Q lcl|Aclame:pro 248 ----DLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMY--------------ASALNR 309 (392) Q Consensus 248 ----~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~--------------~~~l~p 309 (392) .+.+++-+.....+..+....+...+.|...-++|..-.... ++.+..+.+..+ ...+.- T Consensus 305 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~tp~~~~~~~--gn~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~ 382 (471) T protein:vir:10 305 DGMGDQSGVTTIAIDIPTEARNLILERTKKQIFISGQGVNPETDKL--GNSSGVALKFLYSLLELKAGNMETQFRSGYAT 382 (471) T ss_pred CCCccCccceEEeecCChHHHHHHHHHHHHHHHHHhCCcCCCcccc--cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 223444444433444567777888888999888886533322 222222333222 222222 Q ss_pred HHHHHHHHHHHHhhhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccc--------ccC Q lcl|Aclame:pro 310 YLRPAISELEYKLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPA--------PEN 378 (392) Q Consensus 310 ~l~~i~~~l~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~--------~e~ 378 (392) .++.+.+.+...=..++.+.+...+..+..+.+..+..+ +|+++...+.+++ |+..+ |+.+ .+. T Consensus 383 ~~~li~~~~~~~d~~~i~i~f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~~---p~v~D~~~E~eri~~E~~~~~~~ 457 (471) T protein:vir:10 383 LVKMILKHLGLSDKLKIKQTWTRNSINNDTEMAQVVSTL--ATITSRENVAKSN---PIVEDWQDELRLQKAEQEGRSEK 457 (471) T ss_pred HHHHHHHHhccCCCceeEEEeCCCCCCCHHHHHHHHHHH--hccCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHhc Confidence 222222211110001233333334444556666666665 5788887776655 54321 2211 122 Q ss_pred CCCCCCCCCCCCCC Q lcl|Aclame:pro 379 TNKKTTGQSNEPVP 392 (392) Q Consensus 379 ~~~~~~gd~~~p~p 392 (392) .+...+++++.-+= T Consensus 458 ~~~~~~~~~~~e~~ 471 (471) T protein:vir:10 458 LYDMEEVEHESEVE 471 (471) T ss_pred ccccCCCCCccccC Confidence 23333322111111 No 207 >protein:vir:96179 Length: 468 # NCBI annotation: ORF007 # Family: family:all:125 # MgeID: mge:1602 # MgeName: 37 # Cross-refs: genbank:acc:YP_240075;genbank:gi:66395736;genbank:GeneID:5133166 Probab=96.17 E-value=0.00092 Score=37.23 Aligned_cols=366 Identities=9% Similarity=0.013 Sum_probs=152.6 Q ss_pred Ccc-----------------------------hhhHhhcccccccccccccccccccchhhh-hhhhc--CCCCcccchh Q lcl|Aclame:pro 1 MIL-----------------------------PILNFINQTNDPPEVGSVQSYFPDGNDAQI-MESLL--GDNNEWVSAR 48 (392) Q Consensus 1 m~M-----------------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~v~~~ 48 (392) |+- .+.+....+.+.- ....... .+...-. ..... ........+. T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~--~~~~~yY-~g~~~i~~~~~~~~~~~~~~~~~~~ 77 (468) T protein:vir:96 1 MIDIFWPNEKPYHERVVEQIKPQYETQEEMILRLITKHKENVEDI--TVGERYY-NHQPDVLFNAPKRNVKGEIDPFKPD 77 (468) T ss_pred CccccCCcCceeehheeecccccccCcHHHHHHHHHHHHHHHHHH--HHHHHHh-cCCCccccccccccccccccccccc Confidence 111 1111100000000 0000000 0000000 00000 0000000011 Q ss_pred hhhcchHHHHHHHHHHHhhhhCceeeecccc--c----cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceE Q lcl|Aclame:pro 49 AALRNSDLFSIILQLSSDLAIVKINAEKKKN--Q----GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADM 122 (392) Q Consensus 49 ~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~--~----~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~ 122 (392) .-+.++-....++..+.-+-.-|+++--.+. . .++. | ........+..+...+|.+|..+..+.+|++ T Consensus 78 ~ki~~n~~~~Iv~~~~~~l~g~p~~~~~~d~~~~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~- 151 (468) T protein:vir:96 78 WRMYTNYHQNLVDQKVAYAVANPVTYGTEDEKSLKTIQEVLN--H---KWDDKLVDILTAASNKGVEWIQPYVDEQGEF- 151 (468) T ss_pred cccccchHHHHHHHHHhhhccCCceeccCChHHHHHHHHHHh--c---CHHHHHHHHHHHHhhcCeEEEEEEEcCCCce- Confidence 1122333444555555555444554432211 1 1111 2 2344455677888899999998888888875 Q ss_pred EEEEeccccceeeecCc-cceE-EEEEEecCcceeeeEEEeceeEEEecCC-------------------------Cc-- Q lcl|Aclame:pro 123 KWEYLRPSQVNTYYFEY-ENGM-YYNITFDDPKIEPILQAPQSDLIHMKLL-------------------------SI-- 173 (392) Q Consensus 123 ~l~~l~~~~v~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~vih~~~~-------------------------~~-- 173 (392) .+..++|..+-+..+.. .+.+ +....+..........+.+..+.|+... +. T Consensus 152 ~i~~~~p~~~~~v~~~~~~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (468) T protein:vir:96 152 KTFRVPAEQAIPIWTNKERDELKAFIRLYELDGGERVEYWTANDVTFYELKDGQLIPDYYQGEEHVQAHYYVGNKSMSWN 231 (468) T ss_pred EEEEEcccceEEEEcCCCCCceEEEEEEEEecCceEEEEEeCCeEEEEEEcCCceeecccccccccccceeeccccccCC Confidence 46778888887766432 2221 1111111101111111222222222110 00 Q ss_pred -------ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeec Q lcl|Aclame:pro 174 -------DGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVL 246 (392) Q Consensus 174 -------~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl 246 (392) .....|.|.+..+...++....+.....+.++..+.|-.+++--.. .+........ ..++++.+ T Consensus 232 ~iPvv~~~n~~~g~sd~e~v~~liDa~d~~~S~~~~~~~~~~~p~lv~~g~~~-~~~~~~~~~~--------~~~~~i~~ 302 (468) T protein:vir:96 232 RVPFIPFKNNPQEVSDLFMYKTIIDAMDKRLSDTQNTFDEATELIYVLKGYEG-EDLEEFMYNL--------KYYKAINV 302 (468) T ss_pred cccEEEecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCceeeeecCCc-cccchhhhhh--------hcCceEEe Confidence 0113478888777777777766666566666666667555543211 1111111111 11234444 Q ss_pred c--CCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHH---HHHHHHHHHHHHHH Q lcl|Aclame:pro 247 D--DLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASAL---NRYLRPAISELEYK 321 (392) Q Consensus 247 ~--~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l---~p~l~~i~~~l~~~ 321 (392) + ++.+++-+........+.+..+...+.|...-++|....... .++.+..+.+..+.... .-..+.+.+.|.+. T Consensus 303 ~~d~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~~-~~n~Sg~Alk~~~~~l~~k~~~k~~~~~~~l~~~ 381 (468) T protein:vir:96 303 DGDGSGGVDTIQIDVPVQSAKEYLDMLRDYVIEFGQGVDFQQDKF-GNSPSGIALKFMYSNLDLKANKLKNKTLTALQEL 381 (468) T ss_pred cCCCCCcceEEeecCChHHHHHHHHHHHHHHHHHhCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 3 333444444444445567778888899999989886433221 12223333332222111 11111122222211 Q ss_pred -------hhh-----hhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCc---cccccc--------cC Q lcl|Aclame:pro 322 -------LSD-----HISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIP---KDLPAP--------EN 378 (392) Q Consensus 322 -------l~~-----~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~---~e~~~~--------e~ 378 (392) ++. .+.+....- ......+.++.+.++|+++.-.+.+++ |+.. .|+.++ +. T Consensus 382 ~~li~~~~g~~~d~~~i~i~f~~~---~p~d~~e~a~~~~~~g~iS~et~i~~l---~~v~D~~~E~~ri~~E~~~~~~~ 455 (468) T protein:vir:96 382 LQYIIDFYKLSIKVQDVEITFNFN---VMVNELEQSQIGVNSQYLSKETVVTNH---PWVDDPVAEMERIDQEELALPSI 455 (468) T ss_pred HHHHHHHhCCCcccceeeEEecCC---CCcCHHHHHHHHHhcCCCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHH Confidence 111 111111111 122234455566778999987777654 5432 122221 12 Q ss_pred CCCCCCCCCCCCC Q lcl|Aclame:pro 379 TNKKTTGQSNEPV 391 (392) Q Consensus 379 ~~~~~~gd~~~p~ 391 (392) .+...+++.++|- T Consensus 456 ~~~~~~~~~~~~~ 468 (468) T protein:vir:96 456 EEGLNGKENNEPT 468 (468) T ss_pred hhccCCCCCCCCC Confidence 2445666777777 No 208 >protein:vir:9306 Length: 511 # NCBI annotation: phi Mu50B-like protein # Family: family:all:125 # MgeID: mge:165 # MgeName: phi 11 # Cross-refs: genbank:acc:NP_803284;genbank:gi:29028594;genbank:GeneID:1258040 Probab=95.79 E-value=0.0015 Score=36.13 Aligned_cols=380 Identities=8% Similarity=0.011 Sum_probs=161.9 Q ss_pred Ccch-hhHhhcccccccc-c-ccccccccccchhhhhhhhc-CCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeec Q lcl|Aclame:pro 1 MILP-ILNFINQTNDPPE-V-GSVQSYFPDGNDAQIMESLL-GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEK 76 (392) Q Consensus 1 m~Mg-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~ 76 (392) +..- +.+++.+...... + ..... ...+........-. ...... ..-+.++-....++..++-+-.-|+++-- T Consensus 40 ~~~~~i~~~i~~~~~~~~~r~~~l~~-Yy~g~~~il~~~~~~~~~~~~---~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~ 115 (511) T protein:vir:93 40 QNVNEVSKYIEHHMDYQRPRLKVLSD-YYEGKTKNLVELTRRKEEYMA---DNRVAHDYASYISDFINGYFLGNPIQYQD 115 (511) T ss_pred ccHHHHHHHHHHHHHhhHHHHHHHHH-HhcccCccccccCcCcccccC---cceeecchHHHHHHHHhhhhcccCeeecc Confidence 1110 1112221100000 0 00000 00000000000000 000000 00011233344555555555555665532 Q ss_pred ccc--ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCcc--ceEEE-EE-Eec Q lcl|Aclame:pro 77 KKN--QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE--NGMYY-NI-TFD 150 (392) Q Consensus 77 ~~~--~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~--~~~~~-~~-~~~ 150 (392) .+. ...+.+=+...........+..+.+.+|.+|.++.++.+|++. +..++|..+-+..+... ..++. ++ ... T Consensus 116 ~d~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~ay~~vy~de~~~~~-i~~~~p~~~~~vydd~~~~~~~~~vr~~~~~ 194 (511) T protein:vir:93 116 DDKDVLEVIEAFNDLNDVESHNRSLGLDLSIYGKAYELMIRNQDDETR-LYKSDAMSTFVIYDNTIERNSIAGVRYLRTK 194 (511) T ss_pred CChHHHHHHHHHHhhcCHhHHHHHHHHHHHhcCeeEEEEEeCCCCceE-EEEEccceeEEEEcCCCCCceEEEEEEEEee Confidence 221 1122222222234455667888899999999999998888765 67789998888776542 22221 11 110 Q ss_pred --C-ccee---eeEEEeceeEEEecCCCc-------------------------ccccccCCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 --D-PKIE---PILQAPQSDLIHMKLLSI-------------------------DGGKTGISPLYSLRRESKIQRASDRL 199 (392) Q Consensus 151 --~-~~~~---~~~~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~~~~~~~ 199 (392) . .... ....+.+..+.++..... .....|.|.+..+...++....+..- T Consensus 195 ~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~gd~e~v~~liDa~d~~~S~ 274 (511) T protein:vir:93 195 PIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAESD 274 (511) T ss_pred eccccccceEEEEEEEeCCcEEEEEecCCCccccccccccccccCCCccceEEecCCCCCCCchhhHHHHHHHHHHHHHH Confidence 0 0000 111234444444321110 00124788888888888777766665 Q ss_pred HHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHH-H-hcc--ccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHH Q lcl|Aclame:pro 200 TISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRS-F-MKR--SRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQY 275 (392) Q Consensus 200 ~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~-~-~~~--~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~I 275 (392) ..+.+...+.|-.+++-.......+ ..+..... . ... .-.+...-.+++.+++-++....+..+....+...+.| T Consensus 275 ~~~~~~~~~~~~lv~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~~~I 353 (511) T protein:vir:93 275 TANYMSDLNDAMLLIKGNLNLDPVE-VRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDI 353 (511) T ss_pred HHHHHHHhhCcceeeecCcccCchh-hcccccccceecccccccccccccCCCCcceeEEeecCCHHHHHHHHHHHHHHH Confidence 5666666666665555322222111 11100000 0 000 00011122345566666655545556677788888999 Q ss_pred HHHhcccHHHcCCcccccchHHHHH--------------HHHHHHHHHHHHHHHHHHHHHhh-------hhhcccchhhh Q lcl|Aclame:pro 276 AKVYGLPDSYIGGQGDQQSSIQQIS--------------GMYASALNRYLRPAISELEYKLS-------DHISVNMRPAI 334 (392) Q Consensus 276 a~~fgVP~~~lg~~~~~~~~~~~~~--------------~~~~~~l~p~l~~i~~~l~~~l~-------~~~~~d~~~~~ 334 (392) +..-++|..-.+..+ ++.+..+.+ ..+...+...++.|.+.+...-. ..+++.+..-+ T Consensus 354 ~~~s~~P~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~l~~~~~~~~~~d~~~i~~~f~~~~ 432 (511) T protein:vir:93 354 HMFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTWSIDANKDFNTVRYVYNRNL 432 (511) T ss_pred HHHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccccceEEeCCCC Confidence 999999976554322 222222222 22233333333333332222110 01222222333 Q ss_pred hcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccccc------------CCCCC-CCCCCCCCCC Q lcl|Aclame:pro 335 DPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAPE------------NTNKK-TTGQSNEPVP 392 (392) Q Consensus 335 ~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~e------------~~~~~-~~gd~~~p~p 392 (392) ..+..+.+..+.++ .|+++...+.+++ |+.++ |+.++. ..... .+.++.++.+ T Consensus 433 p~n~~e~~~~~~kl--~g~iS~et~~~~l---~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (511) T protein:vir:93 433 PKSLIEELKAYIDS--GGKISQTTLMSLF---SFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDDEQDD 501 (511) T ss_pred CCCHHHHHHHHHHH--hccCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCCC Confidence 34455566666665 5788887666655 54332 222110 11111 1122223333 No 209 >protein:vir:96366 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1613 # MgeName: 53 # Cross-refs: genbank:acc:YP_239644;genbank:gi:66395376;genbank:GeneID:5132842 Probab=95.25 E-value=0.0024 Score=34.91 Aligned_cols=381 Identities=9% Similarity=0.007 Sum_probs=157.4 Q ss_pred Ccch-hhHhhcccccccc-c-ccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILP-ILNFINQTNDPPE-V-GSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) +... +.+++.+...... + ...... ..+........ ...... .-+..-+.++...-.++..++-+-.-|+.+.-. T Consensus 40 ~~~~~i~~~i~~~~~~~~~r~~~l~~Y-y~g~~~il~~~-~~~~~~-~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~ 116 (511) T protein:vir:96 40 QNVNEVSKYIEHHMDYQRPRLKVLSDY-YEGKTKNLVEL-TRRKEE-YMADNRVAHDYASYISDFINGYFLGNPIQYQDD 116 (511) T ss_pred cCHHHHHHHHHHHHHhhhHHHHHHHHH-hhccCcccccc-Cccccc-ccCcceeecchHHHHHHHHhhhhcccCceeecC Confidence 1111 1122221110000 0 000000 00000000000 000000 000001122333445566665555556654322 Q ss_pred c--cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCcc--ceEEE-E-EEec- Q lcl|Aclame:pro 78 K--NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE--NGMYY-N-ITFD- 150 (392) Q Consensus 78 ~--~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~--~~~~~-~-~~~~- 150 (392) + ....+.+-+..-....+...+..+.+.+|.+|.++.++.+|++. +..++|..+.+..+... ..++. + +... T Consensus 117 d~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~vy~d~dg~~~-i~~~~p~~~~~v~dd~~~~~~~~~vr~~~~~~ 195 (511) T protein:vir:96 117 DKDVLEAIEAFNDLNDVESHNRSLGLDLSIYGKAYELMIRNQDDETR-LYKSDAMSTFIIYDNTVERNSIAGVRYLRTKP 195 (511) T ss_pred chHHHHHHHHHHhhcChhHHHHHHHHHHHhcCeeEEEEEeCCCCceE-EEEEcccceEEEEcCCCCCceEEEEEEEEeee Confidence 1 11122222222233445567888899999999999998888764 67788988888776543 12221 1 1111 Q ss_pred -C-ccee---eeEEEeceeEEEecCCCc-------------------------ccccccCCHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 -D-PKIE---PILQAPQSDLIHMKLLSI-------------------------DGGKTGISPLYSLRRESKIQRASDRLT 200 (392) Q Consensus 151 -~-~~~~---~~~~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~~~~~~~~ 200 (392) . .... ....+.++.+.++..... .....|.|.+..+...++....+..-. T Consensus 196 ~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~gd~e~v~~liDa~~~~~S~~ 275 (511) T protein:vir:96 196 IDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAESDT 275 (511) T ss_pred ccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCCchhhhHHHHHHHHHHHHHH Confidence 0 0000 111234444444322110 011247888888777777666665555 Q ss_pred HHHHHcCCCcceEEEeCCCCCchHHHHHHHHH-HHhcccc---CCceeeccCCceEeecccChhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 201 ISSLNSSLNVPGVLTVKGGGLLSDKDKASRSR-SFMKRSR---SGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYA 276 (392) Q Consensus 201 ~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~-~~~~~~~---~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia 276 (392) .+.+...+.|-.+++........+ ....... ....... .+.-.-.+++.+++-++.......+.+..+...+.|+ T Consensus 276 ~~~~~~~~~~~lv~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~~~~~L~~~I~ 354 (511) T protein:vir:96 276 ANYMSDLNDAMLLIKGNLNLDPVE-VRKQKEANVLFLEPTVYVDAEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIH 354 (511) T ss_pred HHHHHHhhcchhheecCccCCchh-hcccccccceeccccceeccccccCCCCcceeEEeecCCHHHHHHHHHHHHHHHH Confidence 555555555655555422222111 1100000 0000000 0000112234444445544445556777888889999 Q ss_pred HHhcccHHHcCCcccccchHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhh-------hhhcccchhhhh Q lcl|Aclame:pro 277 KVYGLPDSYIGGQGDQQSSIQQISG--------------MYASALNRYLRPAISELEYKLS-------DHISVNMRPAID 335 (392) Q Consensus 277 ~~fgVP~~~lg~~~~~~~~~~~~~~--------------~~~~~l~p~l~~i~~~l~~~l~-------~~~~~d~~~~~~ 335 (392) ..-++|..-.+..+. +.+..+.+. .+...+...++.|.+.+...-. ..+++.+..-+. T Consensus 355 ~~s~~P~~~~~~~~~-n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~~~~~~~i~~~f~~~~p 433 (511) T protein:vir:96 355 MFTNTPNMKDDNFSG-TQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKDFNTVRYVYNRNLP 433 (511) T ss_pred HHhCCcccccccccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccceEEeCCCCC Confidence 999999876543322 222223322 2222222222222222221110 012222222333 Q ss_pred cchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccccc------------CCCC-CCCCCCCCCCC Q lcl|Aclame:pro 336 PLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAPE------------NTNK-KTTGQSNEPVP 392 (392) Q Consensus 336 ~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~e------------~~~~-~~~gd~~~p~p 392 (392) .+..+.+..+.++ .|+++..-+.+++ |+.++ |+.+++ .... ..+.+..++.+ T Consensus 434 ~n~~e~~d~~~kl--~G~iS~et~l~~l---~~v~d~~~El~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (511) T protein:vir:96 434 KSLIEELKAYIDS--GGKISQTTLMSLF---SFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDDEQDD 501 (511) T ss_pred cCHHHHHHHHHHH--hccCChHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCC Confidence 4555566666666 4788886666554 54332 222111 1111 11222333333 No 210 >protein:vir:78805 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1858 # MgeName: 80alpha # Cross-refs: genbank:acc:YP_001285356;genbank:gi:148717884;genbank:GeneID:5246936 Probab=95.25 E-value=0.0024 Score=34.91 Aligned_cols=381 Identities=9% Similarity=0.007 Sum_probs=157.4 Q ss_pred Ccch-hhHhhcccccccc-c-ccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILP-ILNFINQTNDPPE-V-GSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) +... +.+++.+...... + ...... ..+........ ...... .-+..-+.++...-.++..++-+-.-|+.+.-. T Consensus 40 ~~~~~i~~~i~~~~~~~~~r~~~l~~Y-y~g~~~il~~~-~~~~~~-~~~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~~ 116 (511) T protein:vir:78 40 QNVNEVSKYIEHHMDYQRPRLKVLSDY-YEGKTKNLVEL-TRRKEE-YMADNRVAHDYASYISDFINGYFLGNPIQYQDD 116 (511) T ss_pred cCHHHHHHHHHHHHHhhhHHHHHHHHH-hhccCcccccc-Cccccc-ccCcceeecchHHHHHHHHhhhhcccCceeecC Confidence 1111 1122221110000 0 000000 00000000000 000000 000001122333445566665555556654322 Q ss_pred c--cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCcc--ceEEE-E-EEec- Q lcl|Aclame:pro 78 K--NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE--NGMYY-N-ITFD- 150 (392) Q Consensus 78 ~--~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~--~~~~~-~-~~~~- 150 (392) + ....+.+-+..-....+...+..+.+.+|.+|.++.++.+|++. +..++|..+.+..+... ..++. + +... T Consensus 117 d~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~a~~~vy~d~dg~~~-i~~~~p~~~~~v~dd~~~~~~~~~vr~~~~~~ 195 (511) T protein:vir:78 117 DKDVLEAIEAFNDLNDVESHNRSLGLDLSIYGKAYELMIRNQDDETR-LYKSDAMSTFIIYDNTVERNSIAGVRYLRTKP 195 (511) T ss_pred chHHHHHHHHHHhhcChhHHHHHHHHHHHhcCeeEEEEEeCCCCceE-EEEEcccceEEEEcCCCCCceEEEEEEEEeee Confidence 1 11122222222233445567888899999999999998888764 67788988888776543 12221 1 1111 Q ss_pred -C-ccee---eeEEEeceeEEEecCCCc-------------------------ccccccCCHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 -D-PKIE---PILQAPQSDLIHMKLLSI-------------------------DGGKTGISPLYSLRRESKIQRASDRLT 200 (392) Q Consensus 151 -~-~~~~---~~~~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~~~~~~~~ 200 (392) . .... ....+.++.+.++..... .....|.|.+..+...++....+..-. T Consensus 196 ~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~gd~e~v~~liDa~~~~~S~~ 275 (511) T protein:vir:78 196 IDKTDEDEVFTVDLFTSHGVYRYLTNRTNGLKLTPRENSFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAESDT 275 (511) T ss_pred ccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccCcCcccceEEecCCCCCCCchhhhHHHHHHHHHHHHHH Confidence 0 0000 111234444444322110 011247888888777777666665555 Q ss_pred HHHHHcCCCcceEEEeCCCCCchHHHHHHHHH-HHhcccc---CCceeeccCCceEeecccChhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 201 ISSLNSSLNVPGVLTVKGGGLLSDKDKASRSR-SFMKRSR---SGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYA 276 (392) Q Consensus 201 ~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~-~~~~~~~---~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia 276 (392) .+.+...+.|-.+++........+ ....... ....... .+.-.-.+++.+++-++.......+.+..+...+.|+ T Consensus 276 ~~~~~~~~~~~lv~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~~~~~L~~~I~ 354 (511) T protein:vir:78 276 ANYMSDLNDAMLLIKGNLNLDPVE-VRKQKEANVLFLEPTVYVDAEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIH 354 (511) T ss_pred HHHHHHhhcchhheecCccCCchh-hcccccccceeccccceeccccccCCCCcceeEEeecCCHHHHHHHHHHHHHHHH Confidence 555555555655555422222111 1100000 0000000 0000112234444445544445556777888889999 Q ss_pred HHhcccHHHcCCcccccchHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhh-------hhhcccchhhhh Q lcl|Aclame:pro 277 KVYGLPDSYIGGQGDQQSSIQQISG--------------MYASALNRYLRPAISELEYKLS-------DHISVNMRPAID 335 (392) Q Consensus 277 ~~fgVP~~~lg~~~~~~~~~~~~~~--------------~~~~~l~p~l~~i~~~l~~~l~-------~~~~~d~~~~~~ 335 (392) ..-++|..-.+..+. +.+..+.+. .+...+...++.|.+.+...-. ..+++.+..-+. T Consensus 355 ~~s~~P~~~~~~~~~-n~Sg~Al~~~~~~l~~ka~~~~~~f~~~l~~~~~li~~~~~~~~~~~~~~~~~~i~~~f~~~~p 433 (511) T protein:vir:78 355 MFTNTPNMKDDNFSG-TQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKDFNTVRYVYNRNLP 433 (511) T ss_pred HHhCCcccccccccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccceEEeCCCCC Confidence 999999876543322 222223322 2222222222222222221110 012222222333 Q ss_pred cchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccccc------------CCCC-CCCCCCCCCCC Q lcl|Aclame:pro 336 PLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAPE------------NTNK-KTTGQSNEPVP 392 (392) Q Consensus 336 ~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~e------------~~~~-~~~gd~~~p~p 392 (392) .+..+.+..+.++ .|+++..-+.+++ |+.++ |+.+++ .... ..+.+..++.+ T Consensus 434 ~n~~e~~d~~~kl--~G~iS~et~l~~l---~~v~d~~~El~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (511) T protein:vir:78 434 KSLIEELKAYIDS--GGKISQTTLMSLF---SFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDDEQDD 501 (511) T ss_pred cCHHHHHHHHHHH--hccCChHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCC Confidence 4555566666666 4788886666554 54332 222111 1111 11222333333 No 211 >protein:vir:106571 Length: 499 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1598 # MgeName: Lj965 # Cross-refs: genbank:acc:NP_958580;genbank:gi:41179240;genbank:GeneID:2717107 Probab=95.14 E-value=0.0027 Score=34.69 Aligned_cols=370 Identities=10% Similarity=0.013 Sum_probs=149.7 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~ 80 (392) +...+.+....+...-. ...... .+...-..... ..... +..-+..+-...+|+..++-+-.-|+.+.-.+.. T Consensus 20 ~i~~~i~~~~~~~~~~~--~l~~Yy-~g~~~i~~~~~-~~~~~---~~~ki~~n~~~~Iv~~~~~~l~g~p~~~~~~~~~ 92 (499) T protein:vir:10 20 AINYAIRELQNRKKRLD--KLSDYY-NGKQEIEKHEF-DNATV---EAANVMVNHAKYITDMNVGFMTGNPVKYVAEKGK 92 (499) T ss_pred HHHHHHHHHHHHHHHHH--HHHHHh-ccccchhcCCc-CcCCC---CcceeecchHHHHHHHHhhhhcccCceeecCChh Confidence 11111111111100000 000000 00000000000 00000 0011112333445666555554456544322211 Q ss_pred --cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCce----------------EEEEEeccccceeeecCccce Q lcl|Aclame:pro 81 --GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGAD----------------MKWEYLRPSQVNTYYFEYENG 142 (392) Q Consensus 81 --~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~----------------~~l~~l~~~~v~~~~~~~~~~ 142 (392) ..+.+-........+...+....+.+|.+|.++..+.+|.+ ..+..++|..+-+..+..... T Consensus 93 ~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~p~~~~~v~~d~~~~ 172 (499) T protein:vir:10 93 NIDDILEVFNQIDIHKHDIELEKDLSVFGYGYELLYLKKTDPISVRDELGNEKLTPNTELKIEVIDPRATVVVCDDTVEH 172 (499) T ss_pred HHHHHHHHHhhcCHhHHHHHHHHHHHhcCceEEEEEecccccccccccccccccccccceEEEEEcccceEEEecCCCCc Confidence 11111111123334567788889999999999888777643 335667777776665543321 Q ss_pred --E-EE-EEE-ecCc--c-eeeeEEEeceeEEEecCC----------------Ccc---------cccccCCHHHHHHHH Q lcl|Aclame:pro 143 --M-YY-NIT-FDDP--K-IEPILQAPQSDLIHMKLL----------------SID---------GGKTGISPLYSLRRE 189 (392) Q Consensus 143 --~-~~-~~~-~~~~--~-~~~~~~~~~~~vih~~~~----------------~~~---------~~~~G~s~~~~~~~~ 189 (392) . .. ++. .+.. . ......+.++.|.++... +.. ....|.|.+..+... T Consensus 173 ~~~~~i~~~~~~~~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~~~~d~e~v~~l 252 (499) T protein:vir:10 173 DPLFAVFTQEKKDLEGNTNGYSITVYMPQRIVEYRTKTTMEVSANDPIVYDGENLFGAVPIIEFRNNEERQGDFEQLISL 252 (499) T ss_pred ceEEEEEEEEEeecCCCceEEEEEEEeCCeEEEEEecCCccccCcceecccccCCCCccceEEecCCCCCCCchHhHHHH Confidence 1 11 111 1100 0 001112333333332100 000 113467778777777 Q ss_pred HHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceee--ccCCceEeecccChhhHHHHHH Q lcl|Aclame:pro 190 SKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVV--LDDLEEFTALEIKSNVAQLLSQ 267 (392) Q Consensus 190 i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v--l~~g~~~~~l~~~~~d~~~~e~ 267 (392) ++....+.....+.+...+.|-.+++........+ ..... +.+.+.. .++|.+++.+........+.+. T Consensus 253 iD~~~~~~S~~~~~~~~~~~~~lv~~G~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 323 (499) T protein:vir:10 253 IDAYNLLQTDRISDKEAFVDALLVTFGFGLGDDKD-DIQRL--------KRGAIEAPPREEGADIEWLTKSFDETQVNLL 323 (499) T ss_pred HHHHHHHHHHHHHHHHHhcCceeeeecCccccccc-hhhhh--------hhcceeccCCCCCCcceEEeccCCHHHHHHH Confidence 77777666666666666666766655322111111 11111 1122333 2456666666655455556677 Q ss_pred HHHHHHHHHHHhcccHHHcCCcccccchHHHHH--------------HHHHHHHHHHHHHHHHHHHHHh----hhhhccc Q lcl|Aclame:pro 268 TDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQIS--------------GMYASALNRYLRPAISELEYKL----SDHISVN 329 (392) Q Consensus 268 ~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~--------------~~~~~~l~p~l~~i~~~l~~~l----~~~~~~d 329 (392) .+...+.|...-++|..-.+..+ ++.+..+.+ ..+...+.-.++.+...++..- ...+++. T Consensus 324 ~~~l~~~I~~~s~~p~~~~~~~~-gn~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~~d~~~i~i~ 402 (499) T protein:vir:10 324 SQSIENDIHKISYVPNMNDEKFM-GNVSGEAMKFKLFGLENLLSIKQRYFFDGLRRRLKLIQTIVNIKGANDDASGCKIS 402 (499) T ss_pred HHHHHHHHHHHhCcccCCchhhc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccceEE Confidence 77778888888888753221111 111222222 2222333333333332222110 0112222 Q ss_pred chhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCc---cccccc---------------cCCCCC---CCCCCC Q lcl|Aclame:pro 330 MRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIP---KDLPAP---------------ENTNKK---TTGQSN 388 (392) Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~---~e~~~~---------------e~~~~~---~~gd~~ 388 (392) +..-+..+..+.+..+..+ .|+++..-+.+++ |+.. .|+.++ .+.++- ..++++ T Consensus 403 f~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~l---~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (499) T protein:vir:10 403 LVANIPSNLSDVVNNVKNA--DGIIPRKYTYSWL---PDVDNPQDVIDEMNQQDAETIKKNQEALRGQDPDRLELEDKQD 477 (499) T ss_pred eCCCCCCCHHHHHHHHHHH--hccCChHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCc Confidence 2233334556666667666 5788887666554 4322 121111 011111 112222 Q ss_pred CCCC Q lcl|Aclame:pro 389 EPVP 392 (392) Q Consensus 389 ~p~p 392 (392) .+.| T Consensus 478 ~~~~ 481 (499) T protein:vir:10 478 DSSE 481 (499) T ss_pred ccCC Confidence 2222 No 212 >protein:vir:3609 Length: 452 # NCBI annotation: ORF32 # Family: family:all:125 # MgeID: mge:74 # MgeName: TP901-1 # Cross-refs: genbank:acc:NP_112695;genbank:gi:13786563;genbank:GeneID:921063 Probab=95.01 E-value=0.003 Score=34.43 Aligned_cols=365 Identities=10% Similarity=0.009 Sum_probs=152.6 Q ss_pred Ccchhh-Hhhccccccccc-ccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccc Q lcl|Aclame:pro 1 MILPIL-NFINQTNDPPEV-GSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKK 78 (392) Q Consensus 1 m~Mg~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~ 78 (392) |....+ +++........+ .....+. .+... +...-....... ..-+..+.....|+..+.-+-.-|+.+--.+ T Consensus 17 ~~~~~i~~~i~~~~~~~~r~~~~~~Yy-~g~~~-i~~~~~~~~~~~---~~ki~~n~~~~ivd~~~~~l~g~~~~~~~~d 91 (452) T protein:vir:36 17 ITVEVVTKFMEKHKLEVARYEYLKNMY-LGIMA-IDDEPAKDSWKP---DNRLAVNFTKYIVDTFTGYFNGIPVKKSHSD 91 (452) T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHh-ccccc-cccCccccccCc---cceeecchHHHHHHHHhhhhcccCceeecCC Confidence 333222 222211110000 0000000 00000 000000000000 0011223334455555555544455433221 Q ss_pred --cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccc--eEEE-EEEecCcc Q lcl|Aclame:pro 79 --NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN--GMYY-NITFDDPK 153 (392) Q Consensus 79 --~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~--~~~~-~~~~~~~~ 153 (392) ....+.+-............+....+.+|.+|.++..+.+|++. +..++|..+.+..+.... ..+. +++..... T Consensus 92 ~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~~~~~v~~d~~g~~~-i~~~~p~~~~~v~d~~~~~~~~~~i~~~~~~~~ 170 (452) T protein:vir:36 92 KEILTKLQEFDNLNDMEDEESELAKMACIYGRAFEFLYQDEDTQTN-VVYNSPENMFMVYDDTVKQEPLFAVRYGVDEDK 170 (452) T ss_pred hhHHHHHHHHHhhcChhHHHHHHHHHHHhcCeEEEEEEecCCCeeE-EEEEcccceEEEEcCCCCCceEEEEEEEEecCc Confidence 11222221112233444567888889999999999888888764 677888888877665432 2211 11111111 Q ss_pred eeeeEEEeceeEEEecCC-----------C---------cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE Q lcl|Aclame:pro 154 IEPILQAPQSDLIHMKLL-----------S---------IDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGV 213 (392) Q Consensus 154 ~~~~~~~~~~~vih~~~~-----------~---------~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~i 213 (392) ......+.+..+.++... + ..+...|.|.+......++....+.....+.+...+.|-.+ T Consensus 171 ~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~g~iPvv~~~n~~~g~sd~e~v~~liDa~d~~~s~~~~~~~~~~~p~~~ 250 (452) T protein:vir:36 171 KLQGEVYTLLETIKISGENDEISFGEGTYNPYPDLPVVEFYFNEERMSIFESVISLVNAFNKAISEKANDVDYFSDQYLT 250 (452) T ss_pred eEEEEEEecCeEEEEEEcCCceEEecceeccCCcccEEEecCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCceeE Confidence 111112333333222110 0 00112477888777777777766666666666666667655 Q ss_pred EEeCCCCCchHHHHHHHHHHHhccccCCceeeccC-----CceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCC Q lcl|Aclame:pro 214 LTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDD-----LEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGG 288 (392) Q Consensus 214 l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~-----g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~ 288 (392) +.- ....++... .... ++++.++. +.+++.+.....+..+....+...+.|+..-++|..-.+. T Consensus 251 ~~g--~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~I~~~s~~p~~~~~~ 319 (452) T protein:vir:36 251 FLG--AAVEEEDLK-NIRS--------NRVINYYADGEGKNVDVKFLEKPDSDSQTENLLDRLTKLIFQTTMVANISDES 319 (452) T ss_pred eec--CCcCchhhh-hhhh--------cceEEecCCCCccCCcceeEeecCCHHHHHHHHHHHHHHHHHHhCccccCccc Confidence 543 222222111 1111 12232221 2234444434445556777888889999999998644332 Q ss_pred cccccchHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhh----hhhcccchhhhhcchHHHHHHHHHHHh Q lcl|Aclame:pro 289 QGDQQSSIQQISG--------------MYASALNRYLRPAISELEYKLS----DHISVNMRPAIDPLGDNYLSTISTATR 350 (392) Q Consensus 289 ~~~~~~~~~~~~~--------------~~~~~l~p~l~~i~~~l~~~l~----~~~~~d~~~~~~~~~~~~~~~~~~~~~ 350 (392) . ++.+..+.+. .+...+...++.+..-+...-. ..+++.+..-+..+..+.+..+.++ T Consensus 320 ~--gn~Sg~Al~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~~~~~~~~i~i~f~~~~p~d~~~~a~~~~k~-- 395 (452) T protein:vir:36 320 F--GSSSGVSLAYKLQAMSNLALSFQRKFQSSLNSRYKLFCELSTNVSNKDSWKDIEYTFTRNEPKDIKEQAETANIL-- 395 (452) T ss_pred c--cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccceEEeCCCCCcCHHHHHHHHHHH-- Confidence 2 2222223222 1222222222222222211100 1122222233334555666666665 Q ss_pred CCCcCHHHHHHHHHhCCCCcc---ccccc------------------cCCCCCCCCCCCC Q lcl|Aclame:pro 351 WGALAENQATFVLQEAGYIPK---DLPAP------------------ENTNKKTTGQSNE 389 (392) Q Consensus 351 ~g~~T~nE~R~~l~~~g~~~~---e~~~~------------------e~~~~~~~gd~~~ 389 (392) .|+++..-+.+++ |+..+ |+.++ ++.....+.+++| T Consensus 396 ~g~iS~et~~~~~---~~~~d~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~e 452 (452) T protein:vir:36 396 MGITSQETALSVI---SVIPDVQAEMEKIKKEEASTAIFDKDKQPSEKGTDTVVSETNEE 452 (452) T ss_pred hccCChHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhhccCCCCcccccCccccCC Confidence 5788876555544 54321 11111 1111122233333 No 213 >protein:vir:96240 Length: 511 # NCBI annotation: ORF006 # Family: family:all:125 # MgeID: mge:1607 # MgeName: 69 # Cross-refs: genbank:acc:YP_239567;genbank:gi:66395299;genbank:GeneID:5132789 Probab=94.94 E-value=0.0031 Score=34.31 Aligned_cols=381 Identities=9% Similarity=0.010 Sum_probs=162.8 Q ss_pred Ccch-hhHhhcccccccc--cccccccccccchhhhhhh-hcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeec Q lcl|Aclame:pro 1 MILP-ILNFINQTNDPPE--VGSVQSYFPDGNDAQIMES-LLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEK 76 (392) Q Consensus 1 m~Mg-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~ 76 (392) +..- +.+++.+...... -....... .+........ ....... +..-+........++..+.-+-.-|+.+.- T Consensus 40 ~~~~~i~~~i~~~~~~~~~r~~~l~~Yy-~g~~~i~~~~~~~~~~~~---~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~ 115 (511) T protein:vir:96 40 QNVNEVSKYIEHHMDYQRPRLKVLSDYY-EGKTKNLVELTRRKEEYM---ADNRVAHDYASYISDFINGYFLGNPIQYQD 115 (511) T ss_pred ccHHHHHHHHHHHHHhhHHHHHHHHHHh-cccCccccccCcCccccc---CcceeecchHHHHHHHHHhhhccCCceeec Confidence 1111 1122221110000 00000000 0000000000 0000000 000111233344556666656556665532 Q ss_pred cc--cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCcc-c-eEEE-E-EEec Q lcl|Aclame:pro 77 KK--NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE-N-GMYY-N-ITFD 150 (392) Q Consensus 77 ~~--~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~-~-~~~~-~-~~~~ 150 (392) .+ ....+.+-+..-........+..+...+|.+|.++.++.+|.+. +.+++|..+.+..+... + .++. + +... T Consensus 116 ~~~~~~~~l~~~~~~n~~~~~~~~~~~~~~i~G~a~~~vy~ded~~~~-i~~~~p~~~~~vydd~~~~~~~~~vr~~~~~ 194 (511) T protein:vir:96 116 DDKDVLEAIEAFNDLNDVESHNRSLGLDLSIYGKAYELMIRNQDDETR-LYKSDAMSTFVIYDNTIERNSIAGVRYLRTK 194 (511) T ss_pred CchHHHHHHHHHHhhcCHHHHHHHHHHHHHhcCeeEEEEEeCCCCceE-EEEEccceeEEEEcCCCCCceEEEEEEEEee Confidence 22 11222222222334455567888899999999999998888754 67788988888776532 1 1111 1 1110 Q ss_pred --Cc-cee---eeEEEeceeEEEecCCCc-------------------------ccccccCCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 --DP-KIE---PILQAPQSDLIHMKLLSI-------------------------DGGKTGISPLYSLRRESKIQRASDRL 199 (392) Q Consensus 151 --~~-~~~---~~~~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~~~~~~~ 199 (392) .+ ... ....+.+..+.++..... .....|.|.+..+...++....+..- T Consensus 195 ~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~~~nn~~g~gd~e~v~~liDa~d~~~S~ 274 (511) T protein:vir:96 195 PIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAESD 274 (511) T ss_pred eccccccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCCceeeEEecCCCCCCCchhhhHHHHHHHHHHHHH Confidence 00 000 011233333333321100 00124788888888888877776666 Q ss_pred HHHHHHcCCCcceEEEeCCCCCchHHH--HHHHHHHHhcc-ccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 200 TISSLNSSLNVPGVLTVKGGGLLSDKD--KASRSRSFMKR-SRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYA 276 (392) Q Consensus 200 ~~~~~~ng~~~~~il~~~~~~~~~~~~--~~~~~~~~~~~-~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia 276 (392) ..+.+...+.|-.+++........+-. .+......... ...+...-.+++.++.-+........+....+...+.|+ T Consensus 275 ~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~e~~~~~L~~~I~ 354 (511) T protein:vir:96 275 TANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIH 354 (511) T ss_pred HHHHHHHhhCceeeeecCccCCchhhcccccccceecccccccccccccCCCCcceeEEeecCCHHHHHHHHHHHHHHHH Confidence 666666666666665543222221111 00000000000 001111123445566666655555667778888899999 Q ss_pred HHhcccHHHcCCcccccchHHHHH--------------HHHHHHHHHHHHHHHHHHHHHhh-------hhhcccchhhhh Q lcl|Aclame:pro 277 KVYGLPDSYIGGQGDQQSSIQQIS--------------GMYASALNRYLRPAISELEYKLS-------DHISVNMRPAID 335 (392) Q Consensus 277 ~~fgVP~~~lg~~~~~~~~~~~~~--------------~~~~~~l~p~l~~i~~~l~~~l~-------~~~~~d~~~~~~ 335 (392) ..-++|..-.+..+ ++.+..+.+ ..+...+.-.++.|.+.+..+-. ..+++.+..-+. T Consensus 355 ~~s~~p~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~~~~~d~~~i~~~f~~~~p 433 (511) T protein:vir:96 355 MFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTWSIDANKDFNTVRYVYNRNLP 433 (511) T ss_pred HHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccceEEeCCCCC Confidence 99999987554322 222222222 22223333333333332222110 012222333333 Q ss_pred cchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccccc------------CCCC-CCCCCCCCCCC Q lcl|Aclame:pro 336 PLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAPE------------NTNK-KTTGQSNEPVP 392 (392) Q Consensus 336 ~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~e------------~~~~-~~~gd~~~p~p 392 (392) .+..+.+..+..+ .|+++...+.+++ |+..+ |+.++. .... ..+.+..++.+ T Consensus 434 ~n~~e~~~~~~kl--~G~iS~et~l~~l---~~v~D~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (511) T protein:vir:96 434 KSLIEELKAYIDS--GGKISQTTLMSLF---SFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDDEQDD 501 (511) T ss_pred CCHHHHHHHHHHH--hccCChHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCC Confidence 4555666666665 6888887776655 44321 221110 0100 11111122222 No 214 >protein:vir:107112 Length: 478 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1571 # MgeName: CNPH82 # Cross-refs: genbank:acc:YP_950601;genbank:gi:119953681;genbank:GeneID:4643121 Probab=94.91 E-value=0.0032 Score=34.26 Aligned_cols=365 Identities=9% Similarity=0.030 Sum_probs=147.8 Q ss_pred CcchhhHhhcccccccccccccccccccch----hhhh--hhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceee Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGND----AQIM--ESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINA 74 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~ 74 (392) ..-.+.+....+.+.- .....++ .+.. .... ......... +..-+.++-...+|+..+.-+=.-|+++ T Consensus 30 ~i~~~i~~~~~~~~r~--~~~~~Yy-~g~~~i~~~~~~~~~~~~~~~~~---~~~ki~~n~~k~ivd~~~~yl~g~p~~~ 103 (478) T protein:vir:10 30 MILRLVREHKENIDNI--TMGERYY-NHHPDILDAPFKRDVNGDYDETK---PDWRMYTNYHQNLVDQKVAYAVANPVTF 103 (478) T ss_pred HHHHHHHHHHHHHHHH--HHHHHHh-cccccccccchhhhccccccccc---ccceeccchHHHHHHHHhhhhcccCcee Confidence 1011111000000000 0000000 0000 0000 000000000 0001123344556666666665566654 Q ss_pred eccccc------cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCc-cceE-EEE Q lcl|Aclame:pro 75 EKKKNQ------GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEY-ENGM-YYN 146 (392) Q Consensus 75 ~~~~~~------~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~-~~~~-~~~ 146 (392) .-.+.. .++. | ........+......+|.+|..+..+.+|++. +..++|..+-+..+.. .+.+ +.. T Consensus 104 ~~~~~~~~~~l~~~~~--n---~~~~~~~~~~~~~~~~G~~~~~v~~d~~~~~~-~~~~~p~~~~~v~d~~~~~~~~~~i 177 (478) T protein:vir:10 104 GVDNDKALKQIQHTLN--H---KWDDKLVDILTAASNKGIEWVQPYVDEEGEFK-TFRVPAEQAVPIWTNKERDELQAFI 177 (478) T ss_pred ecCChHHHHHHHHHHh--c---cHHHHHHHHHHHHhhCCeEEEEEEecCCCceE-EEEEcccceEEEEcCCCCCceEEEE Confidence 322211 1111 2 33445566778888999999998888888764 6778888887766532 2222 111 Q ss_pred EEecCcceeeeEEEeceeEEEecCC-------------------------Cc---------ccccccCCHHHHHHHHHHH Q lcl|Aclame:pro 147 ITFDDPKIEPILQAPQSDLIHMKLL-------------------------SI---------DGGKTGISPLYSLRRESKI 192 (392) Q Consensus 147 ~~~~~~~~~~~~~~~~~~vih~~~~-------------------------~~---------~~~~~G~s~~~~~~~~i~~ 192 (392) ..+..........+.++.|.++... +. .....|.|.+..+...++. T Consensus 178 r~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~~~g~sd~e~v~~liDa 257 (478) T protein:vir:10 178 RVYELDGAERVEYWTKDDVTFYELKEGQLIPDFYRSEDHIQPHYYQGNKLMSWGRVPFIPFKNNPQEVSDLFMYKTIIDA 257 (478) T ss_pred EEEeeeCceEEEEEeCCcEEEEEecCCeeeccccccccccccceecccccccCCcceEEEeccCCCCCCcHHHHHHHHHH Confidence 1111111111112223333222110 00 0112478888887777777 Q ss_pred HHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeec--cCCceEeecccChhhHHHHHHHHH Q lcl|Aclame:pro 193 QRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVL--DDLEEFTALEIKSNVAQLLSQTDW 270 (392) Q Consensus 193 ~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl--~~g~~~~~l~~~~~d~~~~e~~~~ 270 (392) ...+.....+.++..+.|-.+++.-.. .+.......... .+++.+ ++|.+++-+........+.+..+. T Consensus 258 ~~~~~S~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 328 (478) T protein:vir:10 258 LDKRLSDTQNTFDESVELIYILKGYEG-EDMKDFMHNLKY--------YKAISVAGESGSGVDTIKVEVPIDSVKEYTKM 328 (478) T ss_pred HHHHHHHHHHHHHHhhCcceeeecCCc-ccccchhhhhhh--------CceeEecCCCCCcceEEeecCCHHHHHHHHHH Confidence 766655555555555556444443221 111111111111 123333 233444444444455667778888 Q ss_pred HHHHHHHHhcccHHHcCCcccccchHHHHHHHH--------------HHHHHHHHHHHHHHHHHHhh-hhhcccchhhhh Q lcl|Aclame:pro 271 TSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMY--------------ASALNRYLRPAISELEYKLS-DHISVNMRPAID 335 (392) Q Consensus 271 ~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~--------------~~~l~p~l~~i~~~l~~~l~-~~~~~d~~~~~~ 335 (392) ..+.|...-++|..-.+..+ ++.+..+.+..+ ...+.-.++.+.+.+..... ..+.+.+..-+. T Consensus 329 l~~~I~~~s~~p~~~~~~~~-~n~Sg~Ai~~~~~~l~~k~~~~~~~~~~~l~~~~~li~~~~~~~~d~~~i~i~f~~~~p 407 (478) T protein:vir:10 329 LRDYIIEFGQGVDFQQDKFG-NSPSGIALKFMYSNLDLKANKLKNKTLTALQELLQYIIDFYRLDVRVQDIEITFNFNVM 407 (478) T ss_pred HHHHHHHHhCCcCcCccccc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccceEEeCCCCC Confidence 88999999999865433221 122222332221 11111111111111110000 112222222222 Q ss_pred cchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc--------cCCCCCCCCC--CCCCCC Q lcl|Aclame:pro 336 PLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAP--------ENTNKKTTGQ--SNEPVP 392 (392) Q Consensus 336 ~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~--------e~~~~~~~gd--~~~p~p 392 (392) .+..+.+..+..+ .|+++...+.+++ |+..+ |+.++ ...+...++. ++++.+ T Consensus 408 ~~~~e~~~~~~~~--~g~iS~et~i~~~---~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~~~d~~~~~~ 472 (478) T protein:vir:10 408 VNELENSQIAMNS--TGLLSKETILGNH---SWVQDPVAEMERIEQENIELNQQLPDIEEGLNDEQQRQS 472 (478) T ss_pred CCHHHHHHHHHHH--hCCCChHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHhccccCCCCcccccccC Confidence 3445555555554 6788876666544 54321 11111 1112111111 122222 No 215 >protein:vir:103951 Length: 511 # NCBI annotation: phage portal protein # Family: family:all:125 # MgeID: mge:1662 # MgeName: phiNM # Cross-refs: genbank:acc:YP_873988;genbank:gi:118430763;genbank:GeneID:4525445 Probab=94.10 E-value=0.0054 Score=33.02 Aligned_cols=381 Identities=8% Similarity=0.007 Sum_probs=160.8 Q ss_pred Ccch-hhHhhcccccccc-c-ccccccccccchhhhhhhhc-CCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeec Q lcl|Aclame:pro 1 MILP-ILNFINQTNDPPE-V-GSVQSYFPDGNDAQIMESLL-GDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEK 76 (392) Q Consensus 1 m~Mg-~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~ 76 (392) +..- +.+++.+...... + .....+. .+........-. ..... +..-+.+......++..+.-+-.-|+.+-- T Consensus 40 ~~~~~i~~~i~~~~~~~~~r~~~l~~Yy-~g~~~i~~~~~~~~~~~~---~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~ 115 (511) T protein:vir:10 40 QNVNEVSKCIEHHMDYQRPRLKVLSDYY-EGKTKNLVELTRRKEEYM---ADNRVAHDYASYISDFINGYFLGNPIQYQD 115 (511) T ss_pred cCHHHHHHHHHHHHHhhHHHHHHHHHHh-cccCccccccCccccccc---CcceeecchHHHHHHHHhhhhcccCceeec Confidence 1111 1122221110000 0 0000000 010000000000 00000 000112233344556666555556665532 Q ss_pred cccc--cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccc--eEEE-EE-Eec Q lcl|Aclame:pro 77 KKNQ--GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYEN--GMYY-NI-TFD 150 (392) Q Consensus 77 ~~~~--~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~--~~~~-~~-~~~ 150 (392) .+.. ..+.+=+..-........+..++..+|.+|.++.++.+|.+. +..++|..+.+..+.... .++. ++ ... T Consensus 116 ~d~~~~~~l~~~~~~n~~~~~~~~~~~~~~i~G~ay~~vy~dedg~~~-i~~~~p~~~~~vydd~~~~~~~~~vr~~~~~ 194 (511) T protein:vir:10 116 DDKDVLEAIEAFNDLNDVESHNRSLGLDLSIYGKAYEIMIRNQDDETR-LYKSDAMSTFVIYDNTIERNSIAGVRYLRTK 194 (511) T ss_pred CchHHHHHHHHHHhhcCHHHHHHHHHHHHHhcCeeEEEEEeCCCCceE-EEEEccceeEEEEcCCCCCceEEEEEEEEee Confidence 2211 111111111233344566788899999999999998888754 667888888877765431 1111 11 110 Q ss_pred --Cc-cee---eeEEEeceeEEEecCCCc-------------------------ccccccCCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 151 --DP-KIE---PILQAPQSDLIHMKLLSI-------------------------DGGKTGISPLYSLRRESKIQRASDRL 199 (392) Q Consensus 151 --~~-~~~---~~~~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~~~~~~~ 199 (392) .+ ... ....+.+..+.++..... .....|.|.+..+...++....+..- T Consensus 195 ~~d~~~~~~~~~~~iyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~vPvv~f~nn~~g~gd~e~v~~liDa~d~~~S~ 274 (511) T protein:vir:10 195 PIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAESD 274 (511) T ss_pred ecccCccceEEEEEEEeCCcEEEEEecCCCcccccccccccccccCcceeEEEecCCCCCCCchhhhHHHHHHHHHHHHH Confidence 00 000 011233333433321100 00124788888888888777766655 Q ss_pred HHHHHHcCCCcceEEEeCCCCCchHHH--HHHHHHHHhccc-cCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 200 TISSLNSSLNVPGVLTVKGGGLLSDKD--KASRSRSFMKRS-RSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYA 276 (392) Q Consensus 200 ~~~~~~ng~~~~~il~~~~~~~~~~~~--~~~~~~~~~~~~-~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia 276 (392) ..+.+...+.|-.+++........+-. .+.......... -.+...-.++|.+++-++....+..+....+...+.|+ T Consensus 275 ~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~e~~~~~L~~~I~ 354 (511) T protein:vir:10 275 TANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIH 354 (511) T ss_pred HHHHHHHhhCceeeeeccccCCchhhccchhccceecccccccccccccCCCCcceeEEeecCCHHHHHHHHHHHHHHHH Confidence 556666666676665542222211110 000000000000 01111223446666666655555667778888889999 Q ss_pred HHhcccHHHcCCcccccchHHHHH--------------HHHHHHHHHHHHHHHHHHHHHhh-------hhhcccchhhhh Q lcl|Aclame:pro 277 KVYGLPDSYIGGQGDQQSSIQQIS--------------GMYASALNRYLRPAISELEYKLS-------DHISVNMRPAID 335 (392) Q Consensus 277 ~~fgVP~~~lg~~~~~~~~~~~~~--------------~~~~~~l~p~l~~i~~~l~~~l~-------~~~~~d~~~~~~ 335 (392) ..-++|..-.+..+ ++.+..+.+ ..+...+.-.++.+.+.+..... ..+++.+..-+. T Consensus 355 ~~s~~P~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~f~~~l~~~~~li~~~~~~~~~~~~~~d~~~i~i~f~~~~p 433 (511) T protein:vir:10 355 MFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKDFNTVRYVYNRNLP 433 (511) T ss_pred HHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccceeeEEeCCCCC Confidence 99999886554322 122222222 22333333333333333322111 012333333334 Q ss_pred cchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccccc------------CCCCCC-C------CCCCCCCC Q lcl|Aclame:pro 336 PLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAPE------------NTNKKT-T------GQSNEPVP 392 (392) Q Consensus 336 ~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~e------------~~~~~~-~------gd~~~p~p 392 (392) .+..+.+..+.++ .|+++..-+.+++ |+.++ |+.++. +....+ + .++.++.+ T Consensus 434 ~d~~~~~~~~~kl--~G~iS~et~~~~l---~~v~d~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (511) T protein:vir:10 434 KSLIEELKAYIDS--GGKISQTTLMSLF---SFFQDPELEVKKIEEDEKESIKKAQKGIYKDPRDINDDEQDDDTKDTV 507 (511) T ss_pred cCHHHHHHHHHHH--hccCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCcccCcc Confidence 4556666667776 4788886666654 44321 221110 000001 1 11112222 No 216 >protein:vir:99781 Length: 511 # NCBI annotation: portal protein # Family: family:all:125 # MgeID: mge:1497 # MgeName: phiETA2 # Cross-refs: genbank:acc:YP_001004303;genbank:gi:122891757;genbank:GeneID:4712336 Probab=93.75 E-value=0.0065 Score=32.58 Aligned_cols=381 Identities=8% Similarity=0.011 Sum_probs=155.1 Q ss_pred Ccch-hhHhhcccccccc--cccccccccccchhhhhhh-hcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeec Q lcl|Aclame:pro 1 MILP-ILNFINQTNDPPE--VGSVQSYFPDGNDAQIMES-LLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEK 76 (392) Q Consensus 1 m~Mg-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~ 76 (392) +... +.+++.+...... -....... .+........ ....... +..-+..+-..-.|+..++-+-.-|+.+-- T Consensus 40 ~~~~~i~~~i~~~~~~~~~r~~~l~~Yy-~g~~~i~~~~~~~~~~~~---~~~ki~~n~~k~Iv~~~~~yl~g~p~~~~~ 115 (511) T protein:vir:99 40 QNVNEVSKYIEHHMDYQRPRLKVLSDYY-EGKTKNLVELTRRKEEYM---ADNRVAHDYASYISDFINGYFLGNPIQYQD 115 (511) T ss_pred ccHHHHHHHHHHHHHhhHHHHHHHHHHh-cccCccccccCccccccc---CcceeecchHHHHHHHHHhhhcccCceeec Confidence 1111 1122221110000 00000000 0000000000 0000000 000011223344555555555555665532 Q ss_pred ccc--ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCcc--ceEEE-E-EEe- Q lcl|Aclame:pro 77 KKN--QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE--NGMYY-N-ITF- 149 (392) Q Consensus 77 ~~~--~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~--~~~~~-~-~~~- 149 (392) .+. ...+.+=+..-........+..+...+|.+|.++.++.+|++ .+..++|..+-+..+... ..++. + |.. T Consensus 116 ~d~~~~~~l~~~~~~n~~~~~~~~~~~~~~i~G~a~~~vy~ded~~~-~i~~~~p~~~~~vyd~~~~~~~~~~vr~~~~~ 194 (511) T protein:vir:99 116 DDKDVLEAIEAFNDLNDVESHNRSLGLDLSIYGKAYELMIRNQDDET-RLYKSDAMSTFVIYDNTIERNSIAGVRYLRTK 194 (511) T ss_pred CchHHHHHHHHHHhhcCHhHHHHHHHHHHHhcCeeEEEEEeCCCCce-EEEEEccceeEEEEcCCCCCceEEEEEEEEee Confidence 221 111111111113344556688889999999999999888875 467788888888776542 21111 1 111 Q ss_pred --cCccee---eeEEEeceeEEEecCCCc-------------------------ccccccCCHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 150 --DDPKIE---PILQAPQSDLIHMKLLSI-------------------------DGGKTGISPLYSLRRESKIQRASDRL 199 (392) Q Consensus 150 --~~~~~~---~~~~~~~~~vih~~~~~~-------------------------~~~~~G~s~~~~~~~~i~~~~~~~~~ 199 (392) .+.... ....+.+..+.+++.... .....|.|.+..+...++....+..- T Consensus 195 ~~~~~~~~~~~~~~vyt~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~g~sd~e~v~~liDa~d~~~S~ 274 (511) T protein:vir:99 195 PIDKTDEDEVFTVDLFTSHGVYRYLTSRTNGLKLTPRENGFESHSFERMPITEFSNNERRKGDYEKVITLIDLYDNAESD 274 (511) T ss_pred ecccCccceEEEEEEEeCCcEEEEEecCCccccccccccccccCCCCccceEEecCCCCCCCchhhhHHHHHHHHHHHHH Confidence 000000 111233444444321100 00124788888777777766666555 Q ss_pred HHHHHHcCCCcceEEEeCCCCCchHH--HHHHHHHHHh-ccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHH Q lcl|Aclame:pro 200 TISSLNSSLNVPGVLTVKGGGLLSDK--DKASRSRSFM-KRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYA 276 (392) Q Consensus 200 ~~~~~~ng~~~~~il~~~~~~~~~~~--~~~~~~~~~~-~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia 276 (392) ..+.+...+.|-.+++........+. ..+....... .....+...-.++|.+++-++....+..+....+...+.|+ T Consensus 275 ~~~~~~~~~~~~lv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~e~~~~~L~~~I~ 354 (511) T protein:vir:99 275 TANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIH 354 (511) T ss_pred HHHHHHHhhchhhhhccCcccCchhhcccccccceecccccccccccccCCCCcceeEEeecCCHHHHHHHHHHHHHHHH Confidence 55555555555444443222111111 0100000000 00001111223445666666655555666777888889999 Q ss_pred HHhcccHHHcCCcccccchHHHHHHH--------------HHHHHHHHHHHHHHHHHHHhh-------hhhcccchhhhh Q lcl|Aclame:pro 277 KVYGLPDSYIGGQGDQQSSIQQISGM--------------YASALNRYLRPAISELEYKLS-------DHISVNMRPAID 335 (392) Q Consensus 277 ~~fgVP~~~lg~~~~~~~~~~~~~~~--------------~~~~l~p~l~~i~~~l~~~l~-------~~~~~d~~~~~~ 335 (392) ..-++|..-.+..+ ++.+..+.+.. +...+.-.++.|...+...-. ..+++.+..-+. T Consensus 355 ~~s~~P~~~~~~~~-gn~Sg~Alk~~~~~l~~ka~~k~~~~~~~l~~~~~li~~~~~~~~~~~~~~~~~~i~i~f~~~~p 433 (511) T protein:vir:99 355 MFTNTPNMKDDNFS-GTQSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDVSKDFNTVRYVYNRNLP 433 (511) T ss_pred HHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccceEEeCCCCC Confidence 99999987554322 22222233222 222222222222222221100 012222222233 Q ss_pred cchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc------------cCCCCCCC---CCCCCCCC Q lcl|Aclame:pro 336 PLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAP------------ENTNKKTT---GQSNEPVP 392 (392) Q Consensus 336 ~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~------------e~~~~~~~---gd~~~p~p 392 (392) .+..+.+..+.++ .|+++..-+.+++ |+.++ |+.++ ......++ .++.++.+ T Consensus 434 ~n~~e~~~~~~kl--~GiiS~et~l~~l---~~v~D~~~E~~ri~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (511) T protein:vir:99 434 KSLIEELKAYIDS--GGKISQTTLMSLF---SFFQDPELEVKKIEEDEKESIKKAQKNMYQDPRNINDDEQDDST 503 (511) T ss_pred cCHHHHHHHHHHH--hccCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCCCCCCCC Confidence 3455566666665 4788887776654 44321 22111 00010111 11111111 No 217 >protein:vir:94956 Length: 452 # NCBI annotation: putative phage structural protein # Family: family:all:584 # MgeID: mge:1538 # MgeName: Xp15 # Cross-refs: genbank:acc:YP_239276;genbank:gi:66392058;genbank:GeneID:5076601 Probab=90.51 E-value=0.02 Score=29.84 Aligned_cols=358 Identities=12% Similarity=0.017 Sum_probs=149.9 Q ss_pred chhhH-----------------hhccccccccc-ccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHH Q lcl|Aclame:pro 3 LPILN-----------------FINQTNDPPEV-GSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLS 64 (392) Q Consensus 3 Mg~~~-----------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia 64 (392) |++-. ........... ..+=++.+.... .-+.. .- ..|.-.+.+...++.++ T Consensus 1 m~V~~~hp~y~a~~~~W~~~rd~~~G~~~~r~~g~~YLpk~~~E~~-~~Y~~--------rl-~rA~~~n~~~~t~~~~~ 70 (452) T protein:vir:94 1 MPIETKHPEYLAYENDWIDCRVASLGQREVKKKGVRFLPKLSGQTD-DMYNA--------YK-QRALFYSITSKTLSALS 70 (452) T ss_pred CCCCCcCHHHHHHHHHHHHHHHHhcChHHHHcCCcccCCCCCCCCH-HHHHH--------HH-hhccCCchHHHHHHHHh Confidence 33211 00000000000 000000000000 00000 00 01111345666777777 Q ss_pred HhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCC-ceEEEEEeccccce-eeecCccce Q lcl|Aclame:pro 65 SDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANG-ADMKWEYLRPSQVN-TYYFEYENG 142 (392) Q Consensus 65 ~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G-~~~~l~~l~~~~v~-~~~~~~~~~ 142 (392) ..+-+-|+.+--.+...-+..--...+-.+|.+.++...+.+|-+++++..+..| +|... .+.|..|- -..+..++. T Consensus 71 G~vf~k~p~~~~p~~l~~~~~D~~G~~L~~~~~~~~~~~l~~G~~~ilVD~p~~g~rPy~~-~~~~~~Ii~W~~~~~g~l 149 (452) T protein:vir:94 71 GMVLDQPPVITHPDAMSKYFEDQSGIQFYEVFTRAVEETLLMGRVGVFIDRPLTGGDPYIS-VYTTENILNWEEDEDGRL 149 (452) T ss_pred chhhcCCceecccHHHHHHHhcccCCCHHHHHHHHHHHHHhcCeEEEEEeeccCCCceEEE-EechhhhcCccccccCCe Confidence 7766666544211111111112356788999999999999999999999877665 34322 22222211 111111111 Q ss_pred ---------------------E---EEEEEecCc----------ceee-----eEE-------EeceeEEEecCCCcccc Q lcl|Aclame:pro 143 ---------------------M---YYNITFDDP----------KIEP-----ILQ-------APQSDLIHMKLLSIDGG 176 (392) Q Consensus 143 ---------------------~---~~~~~~~~~----------~~~~-----~~~-------~~~~~vih~~~~~~~~~ 176 (392) . |+......+ .++. ... +..-.++.+ +....+. T Consensus 150 ~~v~lre~~~~~d~~d~f~~~~~~~yRvL~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~IP~v~~-~~~~~~~ 228 (452) T protein:vir:94 150 LMVVLREFYTVRDTADRYVQNIRVRYRCLELVDGLLQITVHETQDGKVWELAKTSTIQNVGVTMDYIPFFCI-TPSGLSM 228 (452) T ss_pred eEEEEEEEEEEecCCCcccceeEEEEEEEEEeCCeEEEEEEEccCCceeeeccceeecCCCcccceeEEEEE-cCCCCCC Confidence 0 000000000 0000 000 011111222 1223345 Q ss_pred cccCCHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccC-Cc--eE Q lcl|Aclame:pro 177 KTGISPLYSLRR-ESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDD-LE--EF 252 (392) Q Consensus 177 ~~G~s~~~~~~~-~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~-g~--~~ 252 (392) ..|.+|+..++. .+........+.. .+...+.|-.++.--.. .+ .-..| ++.++.+++ |. +| T Consensus 229 ~~~~pPLl~LA~ln~~hy~~~sd~~~-~l~~~~~P~l~~~g~~~---~~-------~i~iG---~~~~~~lpe~~~~~~y 294 (452) T protein:vir:94 229 TPAKPPMIDIVDINYSHYRTSADLEH-GRHFTGLPTPWITGAES---QS-------TMHIG---STKAWVIPEVAAKVGF 294 (452) T ss_pred CCCccchHHHHHHHHHHhcchhHHHH-HHHHcccceeEeecCcC---CC-------ceEec---ccccccCCCCCCcceE Confidence 668888887765 3444444444443 44455567555543211 11 01223 334567774 64 55 Q ss_pred eecccChhhH--HHHHHHHHHHHHHHHHhcccHHHcCCcc-cccchHHH-H-HHHHHHHHHHHHHHHHHHHHHHhh---- Q lcl|Aclame:pro 253 TALEIKSNVA--QLLSQTDWTSKQYAKVYGLPDSYIGGQG-DQQSSIQQ-I-SGMYASALNRYLRPAISELEYKLS---- 323 (392) Q Consensus 253 ~~l~~~~~d~--~~~e~~~~~~~~Ia~~fgVP~~~lg~~~-~~~~~~~~-~-~~~~~~~l~p~l~~i~~~l~~~l~---- 323 (392) .+.+.+.-.+ +.++.++....++.+ .++-... ..+++.+. . .+--...|.-+...+++++++.|- T Consensus 295 ie~~g~~i~~~~~~l~~le~~m~~~Ga------~ll~~~~~~~~s~ea~~~~~~~~~s~L~~~a~~~e~al~~~l~~~a~ 368 (452) T protein:vir:94 295 LEFTGQGLQSLEKALSEKQAQLASLSA------RLIDNSTRGSEATETVKLRYMSETASLKSVTRAVEALLNKAYSCIMD 368 (452) T ss_pred EccCchhHHHHHHHHHHHHHHHHHHHH------HhhccCCCcchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH Confidence 5655554332 223333333222222 2332111 11222221 1 122246777778888888876552 Q ss_pred -----hhhccc--chhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc---cccccCCCCCCCCCCCC-CCC Q lcl|Aclame:pro 324 -----DHISVN--MRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD---LPAPENTNKKTTGQSNE-PVP 392 (392) Q Consensus 324 -----~~~~~d--~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e---~~~~e~~~~~~~gd~~~-p~p 392 (392) ....+. .++............+-.++.+|.++....++.|.+.|+...+ .+..++++.......|. |.| T Consensus 369 w~g~~~~~~v~~n~dF~~~~~~~~~~~al~~~~~~G~is~~t~~~~L~~~gvl~~~~e~~~i~~E~~~~~~~~~~~~~~~ 448 (452) T protein:vir:94 369 MESMGGTLNIKLNSAFLDSKLTAAELKAWVEAYLSGGISKEIYIHALKVGKVLPPPGESMGVIPDPPAPEPSPSNTPPNP 448 (452) T ss_pred HcCCCCceEEEeccccccccCCHHHHHHHHHHHhcCCCcHHHHHHHHHhCCCCCCccCHHHHHHHhhccCcccCCCCCCC Confidence 111222 2222222223445566678899999999999999888876322 12222222111111121 222 No 218 >protein:vir:78083 Length: 537 # NCBI annotation: gp3 # Family: family:all:125 # MgeID: mge:1844 # MgeName: P35 # Cross-refs: genbank:acc:YP_001468787;genbank:gi:157325368;genbank:GeneID:5601845 Probab=88.90 E-value=0.03 Score=28.97 Aligned_cols=366 Identities=13% Similarity=0.045 Sum_probs=143.2 Q ss_pred Ccchh-hHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccc- Q lcl|Aclame:pro 1 MILPI-LNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKK- 78 (392) Q Consensus 1 m~Mg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~- 78 (392) ..|.- -++.....+-..+... .. .... ...... . .+..-+.+.-..-.|+..++-+-+-|+++--.+ T Consensus 31 ~~~~~~~~YY~g~h~Il~r~~~--~~-~~~~-~~~~d~----~---~~nnki~~nf~k~Ivd~~~~yl~G~Pv~~~~~d~ 99 (537) T protein:vir:78 31 KWAHIGENYYNQENDIEKSRIF--YM-NDKG-QLREDN----Y---ASNVKISHGFFTELVDQLAQYLLSNGVEVKVKDE 99 (537) T ss_pred HHHHHHHHHhcccchhhhcccc--cc-cccc-cccccc----c---ccccccccchHHHHHHHHhhhhcccCceeecCcc Confidence 22211 2222222110000000 00 0000 000000 0 000000111112233333333434454432211 Q ss_pred -ccc---ccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEE--EEEE---e Q lcl|Aclame:pro 79 -NQG---IIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMY--YNIT---F 149 (392) Q Consensus 79 -~~~---~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~--~~~~---~ 149 (392) ... .+..=+. .........+..++..+|.+|.++..+.+|.+. +..++|..+-++.++.+.... ..|. . T Consensus 100 ~~~e~~~~l~~~~~-~~~~~~~~el~~~~s~~G~ay~~~y~de~~~~~-~~~i~p~~~~pv~d~~~~~~~~~~~y~~~~~ 177 (537) T protein:vir:78 100 DNTQLDEILQEYFD-EDFQATIDTLVTNASKKGFEGIFARTTSEGKLK-FQTVDGLTLIPVFDDYGVLKMIIRWYSEIRY 177 (537) T ss_pred hhHHHHHHHHHHhh-ccHHHHHHHHHHHHhhcCeeEEEeeecCCCceE-EEEEccceeEEEEcCCCCceeEEEEEeeeec Confidence 111 1111111 122233456778888999999999888888654 677788887776654432111 1100 0 Q ss_pred cC--c---ceeeeEEEeceeEEEecCCC---------------------------------------------------- Q lcl|Aclame:pro 150 DD--P---KIEPILQAPQSDLIHMKLLS---------------------------------------------------- 172 (392) Q Consensus 150 ~~--~---~~~~~~~~~~~~vih~~~~~---------------------------------------------------- 172 (392) .. . .......+.+..|.+++... T Consensus 178 ~~~~~~~~~~~~~evyt~~~i~~y~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iPvv~ 257 (537) T protein:vir:78 178 STKQQSTETIWHADVWNEEAVCYYIQDDEGVSTTYKLDEAYNPNPAPHVLAIEESTDADFEDTDGYQVLGRSYSKFPFQL 257 (537) T ss_pred cccccCcceEEEEEEEcCCcEEEEEecCCcccccccccccccccccceeeeccccccccccccccccccccCCcceeEEE Confidence 00 0 00011123333333321100 Q ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceE Q lcl|Aclame:pro 173 IDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEF 252 (392) Q Consensus 173 ~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~ 252 (392) ......|.|.+......++....+....++.++.-..|-.++.--+ ..+..+..+.... .+.+.+-+++.++ T Consensus 258 f~nn~~~~sd~e~v~~LiDayd~~~S~~an~~~~~~~~ilvi~g~~-~~~~~~~~~~l~~-------~~~i~v~~d~~~v 329 (537) T protein:vir:78 258 LYNNKDGMSDVKRVKSIIDDYDVMNCFLSNNLQDFSEAIYVVKGFS-GDSTDKLRQNIKA-------KKMIGVNGDNAGM 329 (537) T ss_pred eccCccCCCchhhhHHHHHHHHHHHHhhhhHHHHhcCceeeeecCC-CccchhHHHHHhh-------cCceeecCCCCce Confidence 0001247788888888888777776666666665555554444322 1222222222211 1222232334344 Q ss_pred eecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHH--------------HHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 253 TALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQI--------------SGMYASALNRYLRPAISEL 318 (392) Q Consensus 253 ~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~--------------~~~~~~~l~p~l~~i~~~l 318 (392) +-+.....+.......+...+.|...-.+|.. .....++.+..+. +..+...++-.++.|.+.+ T Consensus 330 ~~l~~~~~~~~~e~~ld~L~~~I~~~s~~~~~--~~~~~gn~SGvAlk~~~~~l~~ka~~ke~~f~~~l~~~~~~i~~~~ 407 (537) T protein:vir:78 330 EIQTVSIPYEARKAKMDIDVENIYRSGMGFNS--TAVGDGNVTNVVIKSRYTLLAMKARKMETSLRKVLRWCADMVVSDI 407 (537) T ss_pred eEEEecCCHHHHHHHHHHHHHHHHHhcCCCCC--ccccccCCcHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH Confidence 44443333333444555566666655444421 1111122222222 2233333333344444433 Q ss_pred HHHhh-----hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---------------------- Q lcl|Aclame:pro 319 EYKLS-----DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---------------------- 371 (392) Q Consensus 319 ~~~l~-----~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---------------------- 371 (392) ..+-. ..+.+.+..-+..+..+.+..+..+..+|+++..-+.+.+ |+..+ T Consensus 408 ~~~~~~~~d~~~i~i~f~~~~P~n~~e~a~~~~~l~~~giiS~eT~l~~~---p~vdd~e~ek~~~ee~~~~~~~~~~~~ 484 (537) T protein:vir:78 408 ALRGLGEYDSNDICFEIEPHVLANELDIATTRKTEAETEALKIGNIMTVA---PRIGDDETLKLIAEELDLDYNELKDAL 484 (537) T ss_pred hhcCCcccccceeeEEeccCCCCCHHHHHHHHHHHHhcCcchHHHHHHhC---CCCCCHHHHHHHHHHHHhhhhhhhhhh Confidence 32211 1123333333445666777888888889999877655433 22110 Q ss_pred -------------ccccccCC---------C-CCCCCCCCCCCC Q lcl|Aclame:pro 372 -------------DLPAPENT---------N-KKTTGQSNEPVP 392 (392) Q Consensus 372 -------------e~~~~e~~---------~-~~~~gd~~~p~p 392 (392) ..+..++. + ..+.||.+.-+| T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 528 (537) T protein:vir:78 485 AEQDAQSLDVSPDVQAMLDGLPVNANQPPVDPNQPVADPNVVPP 528 (537) T ss_pred hhhcccccCcCcchhhhcCCCCCCCCCCCCCccCCCCCCCCCCC Confidence 00000000 0 011222222222 No 219 >protein:vir:100598 Length: 516 # NCBI annotation: gp20 head portal vertex protein # Family: family:all:1036 # MgeID: mge:1488 # MgeName: 25 # Cross-refs: genbank:acc:YP_656382;genbank:gi:109290133;genbank:GeneID:4156576 Probab=87.93 E-value=0.036 Score=28.53 Aligned_cols=381 Identities=9% Similarity=0.112 Sum_probs=150.1 Q ss_pred Ccc-hhhHhhccccc----ccccccccccccccchh---------------hhhhhhcCCCCc------cc-chhhhhcc Q lcl|Aclame:pro 1 MIL-PILNFINQTND----PPEVGSVQSYFPDGNDA---------------QIMESLLGDNNE------WV-SARAALRN 53 (392) Q Consensus 1 m~M-g~~~~~~~~~~----~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~------~v-~~~~a~~~ 53 (392) |.| .+|.|..+.-. ........++.++..+. +++..+.+..+. -| +-+..+.+ T Consensus 1 ~~~~~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~DGa~~i~~~~~~~~~~g~~~~~~d~~~~~~~~~~LI~~YR~ma~~ 80 (516) T protein:vir:10 1 MKFLDLFKFWDRVDQNEYDERLKQGHESIATPKKDDGATEIEAREGESSYNALMQQFFGIDNNISGTKDLINTYRQLTNN 80 (516) T ss_pred CCchHhcccccchhhHHHHhhhcCCCCcccCCCCccCceeeecCcccccccceeeeeecccCccccHHHHHHHHHHhhhc Confidence 666 45555432110 00001111222222211 111112221111 11 23455678 Q ss_pred hHHHHHHHHHHHhhhhC-----ceeeecccc--------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEe Q lcl|Aclame:pro 54 SDLFSIILQLSSDLAIV-----KINAEKKKN--------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRW 114 (392) Q Consensus 54 ~~v~~~i~~ia~~ia~~-----p~~~~~~~~--------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~ 114 (392) |.|..||+.|.+.+.-+ |+.+-=... +.++.--|-...+ ..++.+|...|..|..++ T Consensus 81 pEvd~Av~eIvneaiv~d~~~~pV~l~l~~~e~s~sik~kI~eeF~~Il~ll~F~~~~----~~~fR~WYVDgRi~fhKi 156 (516) T protein:vir:10 81 PEVERAVANIVNEAVVYEKGHKVVSLDLDDTEFSSSIKDKILEEFDEICRLLDASRKL----DTLFRRWYIDSRIFFHKI 156 (516) T ss_pred cchhHHHHHhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHHhccchhh----hHHHHhhhhcceEEEEEE Confidence 99999999999987533 111110000 0011111222233 345677788899988755 Q ss_pred ec-cCCceEEEEEeccccceeeecC-----ccc------eEEEEEE-------ecCc--ceeeeEEEeceeEEEec--CC Q lcl|Aclame:pro 115 RN-ANGADMKWEYLRPSQVNTYYFE-----YEN------GMYYNIT-------FDDP--KIEPILQAPQSDLIHMK--LL 171 (392) Q Consensus 115 r~-~~G~~~~l~~l~~~~v~~~~~~-----~~~------~~~~~~~-------~~~~--~~~~~~~~~~~~vih~~--~~ 171 (392) -+ .+.-+.+|..|+|..+..+..- ++. ..++.|. +.+. ..+..+.++.+-|.+.. .. T Consensus 157 id~~k~GI~elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~daI~y~hSGl~ 236 (516) T protein:vir:10 157 MPNPKEGIVELRRLDPRHVEYYREIVTSDVGGTSVVKGYREFFVYTTGNEGYAYNGRLFEPNTRIKIPRSAIVYAHSGLQ 236 (516) T ss_pred ecCcccceeeeeeeCCcceeeEEeeecccCcchhhhhceeeeeeeecCccceeccccccCCCCceecchhheeeeecCcc Confidence 33 3445899999999998865322 111 1122221 1110 11123445555554432 12 Q ss_pred CcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch---HHHHHHHHHHHhc----------cc Q lcl|Aclame:pro 172 SIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS---DKDKASRSRSFMK----------RS 238 (392) Q Consensus 172 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~---~~~~~~~~~~~~~----------~~ 238 (392) +..+.. =+|-|..+.+.+....-++...--+=-..+.-+=|..++=+.... ++-.+.....+.. .. T Consensus 237 d~~~~~-i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~KNklvYDa~TGev~ 315 (516) T protein:vir:10 237 DCSDRG-IVGYLHNAVKPANQLKLLEDALVIYRITRAPERRVFYIDVGNMPNRKATEYVNGIMQSLKNRVVYDSNTGTVK 315 (516) T ss_pred cCCCCc-eeceehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeec Confidence 222222 256666666665555544444333222222222233333222221 1112222222221 01 Q ss_pred cCCcee-ec----------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc----chHHHH--HH Q lcl|Aclame:pro 239 RSGGPV-VL----------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ----SSIQQI--SG 301 (392) Q Consensus 239 ~~g~~~-vl----------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~----~~~~~~--~~ 301 (392) +..+.+ .| +.|.+++.|..... +.-++-.++..+....+++||.+-|+..+..+ .+.+-. +- T Consensus 316 ddrk~msMlEDyWLpRReGgrgTEItTLpGgqn-lgem~DV~YF~kkLy~aLnVP~SRl~~e~~~~~~~Gr~~EItRDEi 394 (516) T protein:vir:10 316 NQKRNLSMTEDYWLMRRDGKSVTEVTSLPGAQT-MGEMDDVRWFNKKLYEALRIPLSRMPRDDGGMVIGGQDMAITRDEL 394 (516) T ss_pred cchhhhhhHhhhcccccCCCcccceeeccccCC-cChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHHH Confidence 111111 11 23666666654322 22345566778899999999999997443321 111211 22 Q ss_pred HHHHHHHHHHHHHH----HHHHHHhh-hh---------hcccchhhhhcchH--HH------HHHHHHH-----HhCCCc Q lcl|Aclame:pro 302 MYASALNRYLRPAI----SELEYKLS-DH---------ISVNMRPAIDPLGD--NY------LSTISTA-----TRWGAL 354 (392) Q Consensus 302 ~~~~~l~p~l~~i~----~~l~~~l~-~~---------~~~d~~~~~~~~~~--~~------~~~~~~~-----~~~g~~ 354 (392) =+..+|.-+-.... +.|..+|. +. +.-++...+..|.. ++ ...++.+ +-+..+ T Consensus 395 KF~KFI~rLR~rFs~lF~~~L~~qLilKgIit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~ 474 (516) T protein:vir:10 395 DFRKFIVQLQHNFEEIFLDPLKTNLIYKKIILESEWEEQINNIKVNFHQDSYYTELKDIETLRQRVDALSQIEPYVGKYV 474 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 23334433333222 22333331 11 11111111111111 11 1122221 124566 Q ss_pred CHHHHHHHHHhCCCCccccccc------c---CCCCCCCCCCCC Q lcl|Aclame:pro 355 AENQATFVLQEAGYIPKDLPAP------E---NTNKKTTGQSNE 389 (392) Q Consensus 355 T~nE~R~~l~~~g~~~~e~~~~------e---~~~~~~~gd~~~ 389 (392) +.+=+|+...+ +...|+... | +.-+-+..+++- T Consensus 475 s~~yi~k~ILr--~tDeei~~~~k~I~~E~~~~~~~~p~~e~~f 516 (516) T protein:vir:10 475 SHDYVMKNILQ--MTDEQIAQEEKQIEKEANVKRFQNPENEDDF 516 (516) T ss_pred chHHHHHHHhc--CCHhHHHHHHHHHHHhhhCCCCCCCCccccC Confidence 66666544322 122221111 1 111111111111 No 220 >protein:vir:78393 Length: 489 # NCBI annotation: putative structural protein # Family: family:all:584 # MgeID: mge:1851 # MgeName: SETP3 # Cross-refs: genbank:acc:YP_001110831;genbank:gi:134288592;genbank:GeneID:5179656 Probab=87.69 E-value=0.037 Score=28.43 Aligned_cols=368 Identities=9% Similarity=-0.044 Sum_probs=151.9 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~ 80 (392) .|.-+-+.+..-.....+..+-.+-+......-+.... ..|.-.+++...++.++..+-+-|..+ +-... T Consensus 24 ~W~~ird~~~G~~~~~~r~~yl~~~~~~~~e~~Y~~rl---------~rA~~~n~~~~tl~~l~G~vfrk~p~~-~~p~~ 93 (489) T protein:vir:78 24 KWQKVRHALAGELVSYLRNVGLNEPDKAYGEARQAEYE---------AGGIVYNFTRRTLSGMVGSVMRKEPEI-NIPKE 93 (489) T ss_pred HHHHHHHHhcCcccccccCCCCCCCCCCCChHHHHHHH---------hccccCChHHHHHHHHhchhhcCCcce-eccHH Confidence 22222233322110011111111100000000000000 011122445666777776666665544 21111 Q ss_pred cccccCC---ccCCHHHHHHHHHHHHHHhCCeeEEEeeccCC------------ceEEEEEeccccce---eee------ Q lcl|Aclame:pro 81 GIIDNPS---TNANKHGFWQSMFAQLLLGGEAFAYRWRNANG------------ADMKWEYLRPSQVN---TYY------ 136 (392) Q Consensus 81 ~~~~~PN---~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G------------~~~~l~~l~~~~v~---~~~------ 136 (392) ..--..| ...+-.+|.+.++...+.+|-+++++..+..| +|. +..+.|..|- ... T Consensus 94 l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~T~ade~~~~~rPy-~~~~~~~~IinW~~~~v~G~~~ 172 (489) T protein:vir:78 94 LEYLLKNADGSGVGLIQHAQDTLMEIDSVGRGGLLVDAPETGAATAAEQNAGLLNPT-IAFYTTENIVNWRLTRVGSVNR 172 (489) T ss_pred HHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeeCCCCCcCHHHHHHhcCCcE-EEEechhhhcCceeeeeCCccc Confidence 1111222 34688899999999999999999998876544 222 2222222221 000 Q ss_pred ----------------cCccceEEEEE----------------Eec--CcceeeeE---------EEeceeEEEecCCCc Q lcl|Aclame:pro 137 ----------------FEYENGMYYNI----------------TFD--DPKIEPIL---------QAPQSDLIHMKLLSI 173 (392) Q Consensus 137 ----------------~~~~~~~~~~~----------------~~~--~~~~~~~~---------~~~~~~vih~~~~~~ 173 (392) +.++......| ... +....... .+..-.++.+- ... T Consensus 173 Lt~v~lrE~~~~~d~~~~f~~~~~~q~RvL~~~~~g~~~~~~~r~~~~g~~~~~~~~~~~~~g~~~l~~IPfv~~~-~~~ 251 (489) T protein:vir:78 173 VTMVVLRETWEYNEPGNEFETKYGEQYRVLDIDSDGNYRQRLFRFDAEGGAQEDVVEIYPDLGESLRGVIPFTFIG-ATN 251 (489) T ss_pred eeEEEEEEeEEeecCCCCccceeEEEEEEEecCCCcceEEEEEEeecCCcccceeeEEeccCCCCccCeeeEEEEe-cCC Confidence 00111000000 000 00000000 01111111111 122 Q ss_pred ccccccCCHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHH--HHHHhccccCCceeeccCCc Q lcl|Aclame:pro 174 DGGKTGISPLYSLRR-ESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASR--SRSFMKRSRSGGPVVLDDLE 250 (392) Q Consensus 174 ~~~~~G~s~~~~~~~-~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~vl~~g~ 250 (392) .+...|.+|+..++. .+.-......+. ..+...+.|-.+++.-...+ +.....- ..-..| ++..+.|+.+. T Consensus 252 ~~~~~~~pPLl~LA~lni~Hy~~ssd~~-~~l~~~~~P~l~i~G~d~~~--~~~~~~~~~~~i~~g---~~~~~~lp~~~ 325 (489) T protein:vir:78 252 NDATIDDAPLLPLAELNIGHYRNSADNE-ESSFVVGQPTLFIYPGENLT--PQAFKEANPNGIKFG---SRRGHNLGYGG 325 (489) T ss_pred CCCCCCcCchHHHHHHHHHHhhhhhHHH-HHHHHcccceeeeecCccCC--cccccccCccceeeC---CcccccCCCCC Confidence 345567888887765 344444334433 34445566766665322111 1111110 111122 22345666555 Q ss_pred eEeecccChhhHH--HHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHH-HHHHHHHHHHHHHHHHHHHHHHhh---h Q lcl|Aclame:pro 251 EFTALEIKSNVAQ--LLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQI-SGMYASALNRYLRPAISELEYKLS---D 324 (392) Q Consensus 251 ~~~~l~~~~~d~~--~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~-~~~~~~~l~p~l~~i~~~l~~~l~---~ 324 (392) ++.-+..+...+. .++.++.....+ =..++......+...... ...-...|.-++..+++++++.|- . T Consensus 326 ~~~~ie~~~~~~~r~~l~~le~qm~~l------Ga~l~~~~~~~Ta~~~~~~~~~~~S~L~~~a~~~e~al~~~l~~~a~ 399 (489) T protein:vir:78 326 SAQLIQAGENNLARQNMLDKEQQAIQI------GAQLITPTQQITAQSARIQRGADTSVMATIARNVSQAYTDALRWVAV 399 (489) T ss_pred CcceeccCcchHHHHHHHHHHHHHHHH------hhhhccCCcchhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH Confidence 4433333333332 122222222222 122332111112211122 223356777788888888877652 1 Q ss_pred --------hhcc--cchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcccc----ccccCCCCCCCCCCCCC Q lcl|Aclame:pro 325 --------HISV--NMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDL----PAPENTNKKTTGQSNEP 390 (392) Q Consensus 325 --------~~~~--d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~----~~~e~~~~~~~gd~~~p 390 (392) ...+ +.++....-.......+-.++++|.++....++.|.+.|+.+... -++++-++..++.-..+ T Consensus 400 w~G~~~~~~~~i~~n~dF~~~~~d~~~~~al~~~~~~G~is~~t~~~~L~~~gv~d~~~e~~~~ei~~~~~~~~~~~~g~ 479 (489) T protein:vir:78 400 MLGKPEDTEVEFRLNMDFFLEPMTAQDRAAWMADINAGLLPATAYYAALRKAGVTDWTDADIKDAVADQPLPVATEVQGE 479 (489) T ss_pred HcCCCCCCceEEEeecccCcccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCCCCccHHHHHHHHhhcCCCcccCCccc Confidence 1222 222222222223455667778899999999999998888764221 22333333334444445 Q ss_pred CC Q lcl|Aclame:pro 391 VP 392 (392) Q Consensus 391 ~p 392 (392) +| T Consensus 480 ~~ 481 (489) T protein:vir:78 480 IP 481 (489) T ss_pred CC Confidence 55 No 221 >protein:vir:101189 Length: 516 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1582 # MgeName: 44RR2.8t # Cross-refs: genbank:acc:NP_932511;genbank:gi:37651637;genbank:GeneID:2610682 Probab=85.59 E-value=0.052 Score=27.64 Aligned_cols=381 Identities=8% Similarity=0.090 Sum_probs=155.9 Q ss_pred Ccc-hhhHhhcccccc----cccccccccccccchh---------------hhhhhhcCCCCcc------c-chhhhhcc Q lcl|Aclame:pro 1 MIL-PILNFINQTNDP----PEVGSVQSYFPDGNDA---------------QIMESLLGDNNEW------V-SARAALRN 53 (392) Q Consensus 1 m~M-g~~~~~~~~~~~----~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~------v-~~~~a~~~ 53 (392) |.| .+|.|..+.... .-.....++.++..+. +++..+.+..+.. | .-+..+.+ T Consensus 1 ~~~~~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~ 80 (516) T protein:vir:10 1 MKFLDLFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQLINN 80 (516) T ss_pred CCchHhcccccchhhhHHhhhhcCCcCcccCCCCCCCceeeecCCCcccccceeeeeeccccccchHHHHHHHHHHHhhc Confidence 666 455553321110 0001111222222111 1111112211111 1 12345678 Q ss_pred hHHHHHHHHHHHhhhhCc-----eeee--ccc------------cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEe Q lcl|Aclame:pro 54 SDLFSIILQLSSDLAIVK-----INAE--KKK------------NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRW 114 (392) Q Consensus 54 ~~v~~~i~~ia~~ia~~p-----~~~~--~~~------------~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~ 114 (392) |.|..||+.|.+.+.-+. +.+- ..+ .+.++.--|-...+ ..++.+|...|..|..++ T Consensus 81 pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~ik~kI~eeF~~Il~ll~F~~~~----~~~fR~WYVDgRi~fhKi 156 (516) T protein:vir:10 81 PEVERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVCRLLDASRKL----DTLFRRWYVDSRIFFHKI 156 (516) T ss_pred cchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHHhccchhh----hHHHhhhhhcceEEEEEE Confidence 999999999999875331 1110 000 00011111222233 345677788899988755 Q ss_pred ec-cCCceEEEEEeccccceeeecC-----ccce------EEEEEE-------ecCc--ceeeeEEEeceeEEEec--CC Q lcl|Aclame:pro 115 RN-ANGADMKWEYLRPSQVNTYYFE-----YENG------MYYNIT-------FDDP--KIEPILQAPQSDLIHMK--LL 171 (392) Q Consensus 115 r~-~~G~~~~l~~l~~~~v~~~~~~-----~~~~------~~~~~~-------~~~~--~~~~~~~~~~~~vih~~--~~ 171 (392) -+ .+.-+.+|..|+|..+..+..- .+.. .++.|. +.+. ..+..+.++.+-|.|.. .. T Consensus 157 id~~k~GI~Elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSGL~ 236 (516) T protein:vir:10 157 MPNPKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSGLM 236 (516) T ss_pred ecCccccceeeeeeCCcceeeEeeecccccccchhhhhhhheeeeccCccccccccceeCCCcceeechhheeeecccce Confidence 33 3444899999999998865321 1111 112121 1110 11234566777776665 33 Q ss_pred CcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch---HHHHHHHHHHHhc----------cc Q lcl|Aclame:pro 172 SIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS---DKDKASRSRSFMK----------RS 238 (392) Q Consensus 172 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~---~~~~~~~~~~~~~----------~~ 238 (392) +.++..+ +|-|..+.+.+....-++...--+=-..+.-+=|..++=+.... ++-.+.....+.. .. T Consensus 237 d~~~~~i-~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ 315 (516) T protein:vir:10 237 DCSDRGI-IGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTVK 315 (516) T ss_pred eCCCCce-eeeehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeec Confidence 3344433 67777777666655555544433322222222333333222221 1112222222221 01 Q ss_pred cCCcee-ec----------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc----chHH--HHHH Q lcl|Aclame:pro 239 RSGGPV-VL----------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ----SSIQ--QISG 301 (392) Q Consensus 239 ~~g~~~-vl----------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~----~~~~--~~~~ 301 (392) +..+.+ .| +.|.+++.|..... +.-++-.++..+....+++||.+-|+..+..+ .+.+ .-+- T Consensus 316 ddrk~msMlEDyWLpRReGgrgTEItTLpGgqn-lgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDEi 394 (516) T protein:vir:10 316 NQKRNLSMTEDYWLMRRDGKSVTEVSSLPGAQT-MGDMDDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRDEL 394 (516) T ss_pred cchhhhhhHhhhcccccCCCCccceeeccccCC-cChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHHH Confidence 111111 11 23566666654322 23345566778899999999999997543321 1111 1122 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh--------------hcccchhhhhcchH--HH------HHHHHHH-----HhCCCc Q lcl|Aclame:pro 302 MYASALNRYLRPAISELEYKLSDH--------------ISVNMRPAIDPLGD--NY------LSTISTA-----TRWGAL 354 (392) Q Consensus 302 ~~~~~l~p~l~~i~~~l~~~l~~~--------------~~~d~~~~~~~~~~--~~------~~~~~~~-----~~~g~~ 354 (392) =+..+|.-+-......|..-|-+. +.-++...+..|.. ++ ...++.+ +-+..+ T Consensus 395 KF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~ 474 (516) T protein:vir:10 395 DFRKFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGKYV 474 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 233444443333333333222111 11111111111111 11 1112211 124566 Q ss_pred CHHHHHHHHHhCCCCccccccc---------cCCCCCCCCCCCC Q lcl|Aclame:pro 355 AENQATFVLQEAGYIPKDLPAP---------ENTNKKTTGQSNE 389 (392) Q Consensus 355 T~nE~R~~l~~~g~~~~e~~~~---------e~~~~~~~gd~~~ 389 (392) +.+=+|+...+. ...|+... +++-+-+...++- T Consensus 475 s~~yi~k~ILr~--tDeei~~e~k~I~~E~~~~~~~~p~~~~~f 516 (516) T protein:vir:10 475 SHDYVMKNILQM--TEEQIAQEEKQIEQEAGIKRFQNPENEDDF 516 (516) T ss_pred chHHHHHHHhcC--CHhhHHHHHHHHHHhhhCCCCCCCCccccC Confidence 666665443221 11221111 1111111111111 No 222 >protein:vir:101806 Length: 516 # NCBI annotation: gp20 # Family: family:all:1036 # MgeID: mge:1580 # MgeName: 31 # Cross-refs: genbank:acc:YP_238883;genbank:gi:66391958;genbank:GeneID:3416633 Probab=85.59 E-value=0.052 Score=27.64 Aligned_cols=381 Identities=8% Similarity=0.090 Sum_probs=155.9 Q ss_pred Ccc-hhhHhhcccccc----cccccccccccccchh---------------hhhhhhcCCCCcc------c-chhhhhcc Q lcl|Aclame:pro 1 MIL-PILNFINQTNDP----PEVGSVQSYFPDGNDA---------------QIMESLLGDNNEW------V-SARAALRN 53 (392) Q Consensus 1 m~M-g~~~~~~~~~~~----~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~------v-~~~~a~~~ 53 (392) |.| .+|.|..+.... .-.....++.++..+. +++..+.+..+.. | .-+..+.+ T Consensus 1 ~~~~~lf~f~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~ 80 (516) T protein:vir:10 1 MKFLDLFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQLINN 80 (516) T ss_pred CCchHhcccccchhhhHHhhhhcCCcCcccCCCCCCCceeeecCCCcccccceeeeeeccccccchHHHHHHHHHHHhhc Confidence 666 455553321110 0001111222222111 1111112211111 1 12345678 Q ss_pred hHHHHHHHHHHHhhhhCc-----eeee--ccc------------cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEe Q lcl|Aclame:pro 54 SDLFSIILQLSSDLAIVK-----INAE--KKK------------NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRW 114 (392) Q Consensus 54 ~~v~~~i~~ia~~ia~~p-----~~~~--~~~------------~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~ 114 (392) |.|..||+.|.+.+.-+. +.+- ..+ .+.++.--|-...+ ..++.+|...|..|..++ T Consensus 81 pEvd~Av~eIVneaiv~d~~~~pV~l~L~~~~~s~~ik~kI~eeF~~Il~ll~F~~~~----~~~fR~WYVDgRi~fhKi 156 (516) T protein:vir:10 81 PEVERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVCRLLDASRKL----DTLFRRWYVDSRIFFHKI 156 (516) T ss_pred cchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHHhccchhh----hHHHhhhhhcceEEEEEE Confidence 999999999999875331 1110 000 00011111222233 345677788899988755 Q ss_pred ec-cCCceEEEEEeccccceeeecC-----ccce------EEEEEE-------ecCc--ceeeeEEEeceeEEEec--CC Q lcl|Aclame:pro 115 RN-ANGADMKWEYLRPSQVNTYYFE-----YENG------MYYNIT-------FDDP--KIEPILQAPQSDLIHMK--LL 171 (392) Q Consensus 115 r~-~~G~~~~l~~l~~~~v~~~~~~-----~~~~------~~~~~~-------~~~~--~~~~~~~~~~~~vih~~--~~ 171 (392) -+ .+.-+.+|..|+|..+..+..- .+.. .++.|. +.+. ..+..+.++.+-|.|.. .. T Consensus 157 id~~k~GI~Elr~lDPr~i~~vR~i~~~~~~~~~v~~~~~e~~~Y~~~~~~~~~~g~~~~~~~~ikI~~dAI~y~hSGL~ 236 (516) T protein:vir:10 157 MPNPKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSGLM 236 (516) T ss_pred ecCccccceeeeeeCCcceeeEeeecccccccchhhhhhhheeeeccCccccccccceeCCCcceeechhheeeecccce Confidence 33 3444899999999998865321 1111 112121 1110 11234566777776665 33 Q ss_pred CcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch---HHHHHHHHHHHhc----------cc Q lcl|Aclame:pro 172 SIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS---DKDKASRSRSFMK----------RS 238 (392) Q Consensus 172 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~---~~~~~~~~~~~~~----------~~ 238 (392) +.++..+ +|-|..+.+.+....-++...--+=-..+.-+=|..++=+.... ++-.+.....+.. .. T Consensus 237 d~~~~~i-~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklvYDa~TGev~ 315 (516) T protein:vir:10 237 DCSDRGI-IGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTVK 315 (516) T ss_pred eCCCCce-eeeehhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEeCCCCeec Confidence 3344433 67777777666655555544433322222222333333222221 1112222222221 01 Q ss_pred cCCcee-ec----------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc----chHH--HHHH Q lcl|Aclame:pro 239 RSGGPV-VL----------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ----SSIQ--QISG 301 (392) Q Consensus 239 ~~g~~~-vl----------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~----~~~~--~~~~ 301 (392) +..+.+ .| +.|.+++.|..... +.-++-.++..+....+++||.+-|+..+..+ .+.+ .-+- T Consensus 316 ddrk~msMlEDyWLpRReGgrgTEItTLpGgqn-lgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~~~~Gr~~EItRDEi 394 (516) T protein:vir:10 316 NQKRNLSMTEDYWLMRRDGKSVTEVSSLPGAQT-MGDMDDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRDEL 394 (516) T ss_pred cchhhhhhHhhhcccccCCCCccceeeccccCC-cChHHHHHHHHHHHHHHhCCCcccccCCCCceeeccccchhhHHHH Confidence 111111 11 23566666654322 23345566778899999999999997543321 1111 1122 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh--------------hcccchhhhhcchH--HH------HHHHHHH-----HhCCCc Q lcl|Aclame:pro 302 MYASALNRYLRPAISELEYKLSDH--------------ISVNMRPAIDPLGD--NY------LSTISTA-----TRWGAL 354 (392) Q Consensus 302 ~~~~~l~p~l~~i~~~l~~~l~~~--------------~~~d~~~~~~~~~~--~~------~~~~~~~-----~~~g~~ 354 (392) =+..+|.-+-......|..-|-+. +.-++...+..|.. ++ ...++.+ +-+..+ T Consensus 395 KF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~dpyvGky~ 474 (516) T protein:vir:10 395 DFRKFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGKYV 474 (516) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhcccc Confidence 233444443333333333222111 11111111111111 11 1112211 124566 Q ss_pred CHHHHHHHHHhCCCCccccccc---------cCCCCCCCCCCCC Q lcl|Aclame:pro 355 AENQATFVLQEAGYIPKDLPAP---------ENTNKKTTGQSNE 389 (392) Q Consensus 355 T~nE~R~~l~~~g~~~~e~~~~---------e~~~~~~~gd~~~ 389 (392) +.+=+|+...+. ...|+... +++-+-+...++- T Consensus 475 s~~yi~k~ILr~--tDeei~~e~k~I~~E~~~~~~~~p~~~~~f 516 (516) T protein:vir:10 475 SHDYVMKNILQM--TEEQIAQEEKQIEQEAGIKRFQNPENEDDF 516 (516) T ss_pred chHHHHHHHhcC--CHhhHHHHHHHHHHhhhCCCCCCCCccccC Confidence 666665443221 11221111 1111111111111 No 223 >protein:vir:105461 Length: 470 # NCBI annotation: putative phage portal protein # Family: family:all:125 # MgeID: mge:1502 # MgeName: KC5a # Cross-refs: genbank:acc:YP_529871;genbank:gi:90592611;genbank:GeneID:3974525 Probab=85.53 E-value=0.052 Score=27.62 Aligned_cols=355 Identities=14% Similarity=0.068 Sum_probs=145.5 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~ 80 (392) ..-.+.++.....+--.+..... ..... .........+.. +.++-....|+..++-+-+-|+.+.-.+.. T Consensus 23 ~~~~~~~Yy~g~~~I~~~~~~~~-~~~~~--~~~~~~~~~~~k-------i~~n~~k~Iv~~~~~yl~G~p~~~~~~d~~ 92 (470) T protein:vir:10 23 NYKQAVNYYENKTDITTRNNGKA-KLNKE--GKKDPLRSADNR-------IPSNFYQLLVDQEAGYVASVFPDIDVGKDA 92 (470) T ss_pred HHHHHHHHhccccchhccccchh-ccccc--ccccccccCCcc-------cccchHHHHHHhhhhheeccceeeecCchH Confidence 11112222111110000000000 00000 000000000000 011112223333333333344443211111 Q ss_pred ---cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCcc--ceEEE--EEEecCcc Q lcl|Aclame:pro 81 ---GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYE--NGMYY--NITFDDPK 153 (392) Q Consensus 81 ---~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~--~~~~~--~~~~~~~~ 153 (392) .+..-=+ .....-...+..++..+|.+|.++..+.+|++. +..++|..+-+..++.. ..... .|...... T Consensus 93 ~~~~l~~~~~--~~~~~~~~~l~~~~~~~G~a~~~~y~d~~~~~~-~~~~~p~~~~~v~d~~~~~~~~a~ir~y~~~~~~ 169 (470) T protein:vir:10 93 DNKKIIDVLG--DDRALTLNGLLVDSSNAGRAWLHYWIDEDGNFR-YGIIQPDQITPIYATTLDNKLLGILRSYKQLDPD 169 (470) T ss_pred HHHHHHHHHh--hhHHHHHHHHHHHHhhcCeeEEEEEecCCCceE-EEEEcccceEEEEcCCCCCceEEEEEEEEeeecC Confidence 0100001 112233345677888999999999999888764 67788888888776532 11111 11111111 Q ss_pred ee----eeEEEeceeE---------------------------------------------EEecCCCcccccccCCHHH Q lcl|Aclame:pro 154 IE----PILQAPQSDL---------------------------------------------IHMKLLSIDGGKTGISPLY 184 (392) Q Consensus 154 ~~----~~~~~~~~~v---------------------------------------------ih~~~~~~~~~~~G~s~~~ 184 (392) +. ....+.+..+ +|++++ ..|.|.+. T Consensus 170 ~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn-----~~g~sd~e 244 (470) T protein:vir:10 170 SGKYFTVHEYWTDKEAQFFRTNATDSTVIEPYNIITSYDLSAGYETGQSNTLKHNFGRVPFIEFSKN-----KYRLPELN 244 (470) T ss_pred CceEEEEEEEEcCCcEEEEEeecCcceeccccccccccccccccccccccccccCCCeeeEEEeecC-----CCCCCchh Confidence 00 1112222333 333332 24788888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeecc-----CCceEeecccCh Q lcl|Aclame:pro 185 SLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLD-----DLEEFTALEIKS 259 (392) Q Consensus 185 ~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~-----~g~~~~~l~~~~ 259 (392) .....++....+.....+.++.-+.|-.+++.-.... ..+....... .+.+.++ .+.+++-+.... T Consensus 245 ~v~~liDa~d~~~S~~~~~~~~~~~~~lvl~g~~~~~-~~~~~~~~~~--------~~~i~~~~~~~~~~~~~~~lt~~~ 315 (470) T protein:vir:10 245 KYKGLIDAYDDIYNGFINDLDDVQTVILVLTNYGGAD-LHQFMNDLRK--------YKSIKINNTGNGDNSGVDKLQIDI 315 (470) T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceeeecCCccc-cchhhhhhhh--------cCeEeccCCCCCcCceeEEEeecC Confidence 8888888777776666666666666766655422211 1122221111 1222221 133444444333 Q ss_pred hhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhh-- Q lcl|Aclame:pro 260 NVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISG--------------MYASALNRYLRPAISELEYKLS-- 323 (392) Q Consensus 260 ~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~--------------~~~~~l~p~l~~i~~~l~~~l~-- 323 (392) ....+....+...+.|...-++|..-.... ++.+..+.+. .+...++-.++.|.+.+...=. T Consensus 316 ~~~~~~~~~~~L~~~I~~~s~~p~~~~~~~--gn~Sg~Alk~~~~~l~~k~~~~~~~~~~~l~~~~~~i~~~l~~~~~d~ 393 (470) T protein:vir:10 316 PVEARDDALKITRKNIFLFGQGIDPANFES--SNASGVAIKMLYSHLELKAAKTQTYFEHAINELVRAIMRYLNFSDADK 393 (470) T ss_pred ChHHHHHHHHHHHHHHHHHhCCCCCCcccc--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccc Confidence 344556677888888988888885432221 2222223322 2222333323322222211000 Q ss_pred hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---ccccc-----------cCCCCCC--CCCC Q lcl|Aclame:pro 324 DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPAP-----------ENTNKKT--TGQS 387 (392) Q Consensus 324 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~~-----------e~~~~~~--~gd~ 387 (392) .++.+.+..-+..+..+.+..+..+ +|+++..-+.+++ |+..+ |+.++ ...+... +.|. T Consensus 394 ~~i~i~f~~~~p~d~~e~~~~~~~~--~g~iS~et~l~~~---p~v~D~~~E~eri~~E~~e~~~~~~~~~~~~~~~~dd 468 (470) T protein:vir:10 394 RHISQHWTRTKVEDSLTKAQIVSTV--ANYSSKEAVAKAN---PIVDDWQQELKDLAKDKEENDPYSNQADELNGKGVND 468 (470) T ss_pred ceeeEEeccCCCCCHHHHHHHHHHH--hccCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHhhccccccCCCCCCC Confidence 1223333333444556666666665 6888887666554 54321 22111 1111111 1122 Q ss_pred CC Q lcl|Aclame:pro 388 NE 389 (392) Q Consensus 388 ~~ 389 (392) .| T Consensus 469 e~ 470 (470) T protein:vir:10 469 EQ 470 (470) T ss_pred CC Confidence 22 No 224 >protein:vir:102668 Length: 547 # NCBI annotation: Hypothetical protein # Family: family:all:481 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024419;genbank:gi:48696640;genbank:GeneID:2948135 Probab=82.76 E-value=0.074 Score=26.78 Aligned_cols=325 Identities=11% Similarity=0.032 Sum_probs=137.7 Q ss_pred Ccc--hhhHhhcccccccccccccccccccch----------------hhhhhhhc-CCCCcccchhhhhcchHHHHHHH Q lcl|Aclame:pro 1 MIL--PILNFINQTNDPPEVGSVQSYFPDGND----------------AQIMESLL-GDNNEWVSARAALRNSDLFSIIL 61 (392) Q Consensus 1 m~M--g~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~-~~~~~~v~~~~a~~~~~v~~~i~ 61 (392) ++. .+++-........... .....++.. ++...||. ............. ......|-+ T Consensus 32 lP~~~~~~~~~~~~~~~~~~~--~~~i~dst~~~a~~~Las~L~~~ltPp~~~WF~l~~~d~~~~~~~~v-~~~L~~ve~ 108 (547) T protein:vir:10 32 MPMRSDFFSDLRSEGSINWNQ--NREVFDSTAGDGLETLSSSLHGSLTSPATKWFELAFRDKELNSDDEC-RKWLENATH 108 (547) T ss_pred cccccccccCCCCCccccccc--ccccccchHHHHHHHHHHHHHHhhcCCCCcccccccCCccccchHHH-HHHHHHHHH Confidence 333 3443222111000000 000000000 00111111 0001111111100 111222333 Q ss_pred HHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC-CceEEEEEeccccceeeecCcc Q lcl|Aclame:pro 62 QLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN-GADMKWEYLRPSQVNTYYFEYE 140 (392) Q Consensus 62 ~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~-G~~~~l~~l~~~~v~~~~~~~~ 140 (392) .|...+. +-| .+.-+..+..+|+.+|++.+++..+.+ .....+..++...+-+..+..| T Consensus 109 ~i~~~l~----------------~sn----f~~~~~~~~~~L~~~G~a~l~~~~d~~~~~~~r~~~~pl~~~~v~~d~~G 168 (547) T protein:vir:10 109 DVYSALQ----------------DSN----FNLEANETYIDLCGYGNAIMVEEEDEDEEGSVVFQSSPIQDSYFEEDSRG 168 (547) T ss_pred HHHHHHH----------------hcC----cHHHHHHHHHHHHhHCcEeEEeccCCCCCCceeEEEeecceEEEeeCCCc Confidence 3333332 222 222245667889999999888765432 1223333333333333333222 Q ss_pred ceE--EEE--------------------------------------E-----------------------------E--e Q lcl|Aclame:pro 141 NGM--YYN--------------------------------------I-----------------------------T--F 149 (392) Q Consensus 141 ~~~--~~~--------------------------------------~-----------------------------~--~ 149 (392) +.. +.. + + . T Consensus 169 ~v~~i~r~~~~t~~qi~~~fg~~~l~~~v~~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~p~~s~~~e~ 248 (547) T protein:vir:10 169 QVVNFYRVFRWTPAQIYDRFGDEGTPEAIIKKAKEASNQAALKQEVVMCVFTRYDKKQNRNAGTVLAPTERPFGKKWILK 248 (547) T ss_pred CeeeeeeeeeccHHHHHHhcCcccCCHHHHHHHhcCCCcccceEEEEEEEeeccCCCCCccccceeeccccceeEEEEEe Confidence 211 000 0 0 0 Q ss_pred cCc-ceeeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHH Q lcl|Aclame:pro 150 DDP-KIEPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKA 228 (392) Q Consensus 150 ~~~-~~~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~ 228 (392) ++. .....-.|..-.++..+....+|..||.||...+...+.....+.+.......-...|..++..++- ... T Consensus 249 ~~~~~~l~esg~~e~P~~~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~pp~~v~~~g~-~~~----- 322 (547) T protein:vir:10 249 EGAVQLGEEGGYYEMPAYAIRWRKSAGSQWGFGPSHLALPDVLTANRYVELVLRSSEKVIDPAIMVTERGL-ISD----- 322 (547) T ss_pred cCceeeeecCCcccCCeeeeeeeecCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecccccc-ccc----- Confidence 000 0000000112245666666677889999999999999999999888888877777777755432221 111 Q ss_pred HHHHHHhccccCCceeeccCCceEeecccChhhHHH-HHHHHHHHHHHHHHhcccHHHcCCcccccchH-HHHHHHHHHH Q lcl|Aclame:pro 229 SRSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQL-LSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSI-QQISGMYASA 306 (392) Q Consensus 229 ~~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~-~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~-~~~~~~~~~~ 306 (392) . + ...|++.+.++.-.++++...+ +.+. .+..+.....|-.+|-+....+-....-|.++ .......... T Consensus 323 -~-~-----~~pgg~~~~~~~~~v~pl~~~~-~~~~~~~~i~~~~~rI~~af~~d~~~~~~~~~~TAtEV~~r~~E~~~~ 394 (547) T protein:vir:10 323 -I-D-----LGASGLTVVRDMESMKPFESRA-RFDVSSIQLTDLRSAVRRIYYVDQLQMKDSPAMTATEVQVRYELMQRL 394 (547) T ss_pred -c-e-----ecCCeeeecCCcccceeeeccc-chHHHHHHHHHHHHHHHHHhhhhhhhcCCCccccHHHHHHHHHHHHHH Confidence 0 0 1235666666666777776543 4443 45667778889999988765553333333332 2334445567 Q ss_pred HHHHHHHHHHHHHHHhhhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccc-------cccCC Q lcl|Aclame:pro 307 LNRYLRPAISELEYKLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLP-------APENT 379 (392) Q Consensus 307 l~p~l~~i~~~l~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~-------~~e~~ 379 (392) |.|....+.++|-.-|.. ..+..+.+.|++-+ +|.++- ..+.. T Consensus 395 LG~v~~rl~~E~l~Pli~------------------r~~~il~r~g~lP~------------~p~~l~~~~~~~~~v~~i 444 (547) T protein:vir:10 395 LGPTLGRLENDFLSPMIQ------------------RTFNIRFRAGKLGE------------LPSKLLESGKAAMDIVYT 444 (547) T ss_pred hhHHHHHHHHHHHHHHHH------------------HHHHHHHhcCCCCC------------CchhhhccCcceEEEEec Confidence 777777777665432211 01122222322111 111110 01111 Q ss_pred CCCCCC-----------------CCCCCCC Q lcl|Aclame:pro 380 NKKTTG-----------------QSNEPVP 392 (392) Q Consensus 380 ~~~~~g-----------------d~~~p~p 392 (392) .++.-+ .--+..| T Consensus 445 s~Laraq~~~~~~~i~~~~~~v~~laq~~P 474 (547) T protein:vir:10 445 GPLSRAQKIDQAASIERWAGSTAQLAEINP 474 (547) T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCh Confidence 111111 0011234 No 225 >protein:vir:102330 Length: 451 # NCBI annotation: putative portal protein # Family: family:all:125 # MgeID: mge:1566 # MgeName: phi CD119 # Cross-refs: genbank:acc:YP_529555;genbank:gi:90592641;genbank:GeneID:3974462 Probab=72.05 E-value=0.19 Score=24.57 Aligned_cols=362 Identities=10% Similarity=-0.011 Sum_probs=142.7 Q ss_pred CcchhhHhhcccccccccccccccccccchhhh---hhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQI---MESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKK 77 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~ 77 (392) +.-.+.+....+...- ....... .+...-. +............+..-+.+.-..-.|+..++-+-+-|+.+.-. T Consensus 5 ~i~~~i~~~~~~~~r~--~~~~~YY-~g~~~i~~~~~~~~~~~~~~~~~~~~ki~~n~~~~Ivd~~~~yl~G~p~~~~~~ 81 (451) T protein:vir:10 5 KIRAIISADAARRQEI--LQAKSYY-YNKNDILKKGVVVQNRDENPLRNADNRISHNFHEILVDEKASYMFTYPVLFDID 81 (451) T ss_pred HHHHHHHHHHHHHHHH--HHHHHHh-cccCccccccccccccccccccccccccccchHHHHHHhhhhheecccceeecC Confidence 1112221111110000 0000000 0000000 00000000000001111223334456666666665666654321 Q ss_pred ccc---cccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC--------CceEEEEEeccccceeeecCcc-ceEEE Q lcl|Aclame:pro 78 KNQ---GIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN--------GADMKWEYLRPSQVNTYYFEYE-NGMYY 145 (392) Q Consensus 78 ~~~---~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~--------G~~~~l~~l~~~~v~~~~~~~~-~~~~~ 145 (392) +.. ..+.. ...-........+..+...+|.||.++.++.+ | ...+..++|..+-+.+++.. +.+.. T Consensus 82 ~~~~~~~~~~~-~~~n~~~~~~~~~~~~~~~~G~a~~~~y~de~~~~~~~~~~-~~~~~~i~p~~~~~vydd~~~~~~~~ 159 (451) T protein:vir:10 82 NNKELNEKVTD-VLGNEFTRKAKNLAIEASNCGSAWLHYWIDEEYSGEQVTNQ-TFKYGVVNTEEIIPIYRNGIERELEA 159 (451) T ss_pred CcHHHHHHHHH-HhccCHHHHHHHHHHHHhhcCeEEEEEeecCCccccccccc-ceeEEEEcccceEEEEcCCCCCceEE Confidence 111 11110 00113345556778888999999998877754 3 23466678887776654422 11111 Q ss_pred ---EEEecCcce--------eeeEEEeceeEEEecCCC---------------cc---------cccccCCHHHHHHHHH Q lcl|Aclame:pro 146 ---NITFDDPKI--------EPILQAPQSDLIHMKLLS---------------ID---------GGKTGISPLYSLRRES 190 (392) Q Consensus 146 ---~~~~~~~~~--------~~~~~~~~~~vih~~~~~---------------~~---------~~~~G~s~~~~~~~~i 190 (392) ++....... .....+.+..+.+++... .. ....|.|.+......+ T Consensus 160 ~ir~~~~~~~~~~~~~~~~~~~~e~yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~nn~~~~~d~e~v~~li 239 (451) T protein:vir:10 160 VIRYYIQLEDVKGQIQKQAYTYVEFWTDKILDKYKFFGVSCCGSQIEHITVQHRFNSVPFVEFSNNIKKQSDLSKYKKIL 239 (451) T ss_pred EEEEEEeeecccccccceEEEEEEEEeCCeEEEEEecccCccccccccccccCCCCeeeEEEeccCCCCCCchhhHHHHH Confidence 111100000 001122333333332100 00 0123667777777777 Q ss_pred HHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeecc-----CCceEeecccChhhHHHH Q lcl|Aclame:pro 191 KIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLD-----DLEEFTALEIKSNVAQLL 265 (392) Q Consensus 191 ~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~-----~g~~~~~l~~~~~d~~~~ 265 (392) +....+..-..+.++--+.|-.+++.-.. .+.++....... .+++.+. .|.+.+-+.....+..+. T Consensus 240 Da~~~~~S~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~~--------~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~ 310 (451) T protein:vir:10 240 DLYDRVMSGFANDLEDIQQIIYILENFGG-EDTSEFLKELKR--------YKTIKTETDSEGDSGGLKTMQIEIPTEARK 310 (451) T ss_pred HHHHHHHHHHHHHHHHhccceeeeecCCc-ccchhhHHHHhh--------CCeEEecCcCCccCCcceEEeecCCHHHHH Confidence 66665555555555544555444442111 111222222111 1223332 223333333333444566 Q ss_pred HHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------h----hhhcccc Q lcl|Aclame:pro 266 SQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNRYLRPAISELEYKL-----------S----DHISVNM 330 (392) Q Consensus 266 e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p~l~~i~~~l~~~l-----------~----~~~~~d~ 330 (392) +..+...+.|...-++|..--.. -++.+..+.+..+.. +.--+...+..|...| . ..+++.+ T Consensus 311 ~~~~~l~~~I~~~s~~p~~~~~~--~gn~Sg~Alk~~~~~-l~~k~~~k~~~f~~~l~~~~~li~~~~~~~d~~~i~i~f 387 (451) T protein:vir:10 311 IILEILKKQIYESGQGLQQDTEN--FGNASGVALKFFYRK-LELKSGLLETEFRTSFDKLIKAILYFLGVTDYKKIQQTY 387 (451) T ss_pred HHHHHHHHHHHHHhCcccccccc--cccccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccceeEEe Confidence 77888889999999998532211 122222233222211 1111222222222211 1 1122222 Q ss_pred hhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCcc---cccc------------ccCCCCCCC Q lcl|Aclame:pro 331 RPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPK---DLPA------------PENTNKKTT 384 (392) Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~---e~~~------------~e~~~~~~~ 384 (392) ..-+..+..+.+..+..+ .|+++...+.+++ |+..+ +... .+++++... T Consensus 388 ~~~~p~n~~e~~~~~~kl--~g~iS~et~~~~~---p~v~d~~~e~~~~~ee~~~~~~~~~~~~~~~~~ 451 (451) T protein:vir:10 388 TRNMMSNDLEDADIATKS--VGIIPTKIILRHH---PWVDDVEEAEKLYLEEKKIQASKVSDDYNNFTE 451 (451) T ss_pred cCCCCCCHHHHHHHHHHH--hccCchHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCC Confidence 333334555666666666 4788886666554 55332 1111 122222211 No 226 >protein:vir:97265 Length: 513 # NCBI annotation: hypothetical protein ORF013 # Family: family:all:584 # MgeID: mge:1657 # MgeName: M6 # Cross-refs: genbank:acc:YP_001294521;genbank:gi:149408242;genbank:GeneID:5237130 Probab=71.25 E-value=0.2 Score=24.44 Aligned_cols=362 Identities=13% Similarity=0.051 Sum_probs=149.6 Q ss_pred CcchhhHhhcccccccccccccccccc----cchhhh-hhhhcCC-----CCc------------ccch--hhhhcchHH Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPD----GNDAQI-MESLLGD-----NNE------------WVSA--RAALRNSDL 56 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~-----~~~------------~v~~--~~a~~~~~v 56 (392) |.=. .++. ++.+.+. ...+.. ...+.|. .+. .+.. ..|.-.+++ T Consensus 1 m~~~----------~~~~--v~~~h~~y~a~~~~W~~ird~~~G~~~~r~~g~~YLPk~~~E~~~~Y~~rl~rA~~~n~~ 68 (513) T protein:vir:97 1 MADK----------DPKS--PATTSGAYDQMLPRWHVIETLLGGTEAMREAGETYLPRHQEETDKGYQERLASAVLLNMV 68 (513) T ss_pred CCCC----------CCCC--CCcCCHHHHHHHHHHHHHHHHhcChHHHHhhcccCCCCCCCCCHHHHHHHHhcccCCChH Confidence 1100 0000 0000000 000000 0000000 000 0110 012223556 Q ss_pred HHHHHHHHHhhhhCceeeeccccc----cccccCC-ccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCc----------- Q lcl|Aclame:pro 57 FSIILQLSSDLAIVKINAEKKKNQ----GIIDNPS-TNANKHGFWQSMFAQLLLGGEAFAYRWRNANGA----------- 120 (392) Q Consensus 57 ~~~i~~ia~~ia~~p~~~~~~~~~----~~~~~PN-~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~----------- 120 (392) ...++.++..+-+-|+.+...... .+...-. ...+-.+|.+.++...+.+|-+++++..+..+. T Consensus 69 ~~tl~~l~G~vf~k~p~~~~~~p~~~~~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~~~~~~~T~Ad 148 (513) T protein:vir:97 69 EQTLDTLSGKPFSEPIKLNEDVPKAIEETILPDVDLQGNNLDVFARQWFREGMAKALCHVLIDMPRPAPREDGQPRTLAD 148 (513) T ss_pred HHHHHHHhhhhhhcCcccCcCchHHHHHHHhhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEecCCCCCccchhHHhHHH Confidence 677777777777777766432211 1222222 456888999999999999999999987543321 Q ss_pred -------eEEEEEeccccce----------------------eeecCccceEEEEEEe-cCcceee-------------e Q lcl|Aclame:pro 121 -------DMKWEYLRPSQVN----------------------TYYFEYENGMYYNITF-DDPKIEP-------------I 157 (392) Q Consensus 121 -------~~~l~~l~~~~v~----------------------~~~~~~~~~~~~~~~~-~~~~~~~-------------~ 157 (392) |. +..+.|..|- ...+.++...+..+.. ..+.... . T Consensus 149 e~~~~~rPy-~~~~~~e~IinW~~~~v~G~~~L~~v~l~E~~~~~Dgf~~~~~~q~rvL~~g~~~v~r~~~~~~~~~~e~ 227 (513) T protein:vir:97 149 DRREGLRPY-WVMIKPECLLFARSEVINGVEVLQHVRIIEHYMEQDGFAEVCKRRIRVLEPGLVQLWEPVKKSNAQKEEW 227 (513) T ss_pred HHhhccCce-EEEecHhhhcCcceeccCcceeeeeEEEEEEEeecCCCcceEEEEEEEEeCceEEEEEeecCCCccccce Confidence 21 2222222220 0111112111111110 0000000 0 Q ss_pred -------EEEeceeEEEecCCCcccccccCCHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHH Q lcl|Aclame:pro 158 -------LQAPQSDLIHMKLLSIDGGKTGISPLYSLRR-ESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKAS 229 (392) Q Consensus 158 -------~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~-~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~ 229 (392) ..+..-.++.+- ....+...|.+|+..++. .+........+... +...++|-.+++.-. +++.. T Consensus 228 ~~~~~g~~~l~~IP~v~~~-~~~~~~~~~~pPLl~LA~ln~~hy~~~Sd~~~i-l~~~~~P~l~~~G~~---~~~~~--- 299 (513) T protein:vir:97 228 ALADEWATGLNYVPLVTFY-ADRQGFMMGKPPLLDLAHLNVAHWQSASDQRHI-LTVSRFPILACSGAS---GEDSD--- 299 (513) T ss_pred EEecCCCCcCCceeEEEEe-cCCCCCCCCccchHHHHHHHHHHHhhhhhHHHH-HHhcccceeeeecCC---cCCCC--- Confidence 011111122221 123355668888887665 44444444444443 444556766665221 11100 Q ss_pred HHHHHhccccCCceeeccC-C--ceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcc-cccchHHHH-HHHHH Q lcl|Aclame:pro 230 RSRSFMKRSRSGGPVVLDD-L--EEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQG-DQQSSIQQI-SGMYA 304 (392) Q Consensus 230 ~~~~~~~~~~~g~~~vl~~-g--~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~-~~~~~~~~~-~~~~~ 304 (392) .-..| +..++.+++ | .+|.+.+.+.-... .+..+...+++ +..|. .++.... ..+...... .+--. T Consensus 300 --~i~iG---~~~~~~lpe~~~~~~yie~~g~~i~~~-~~~l~~le~qm-~~~Ga--~ll~~~~~~~Ta~a~~~~~~~~~ 370 (513) T protein:vir:97 300 --PVVVG---PNKVLYNPDPAGRFYYVEHTGQAIAAG-RTDLKDLEEQM-AGYGA--EFLKRKTGGQTATARALDSAEAT 370 (513) T ss_pred --ceEee---ccccccCCCCCCcceeeccCchhHHHH-HHHHHHHHHHH-HHHHH--HhhccCCccccHHHHHHHHHHHH Confidence 01122 334566664 4 45556555443322 22222222232 22232 2332211 112111111 22234 Q ss_pred HHHHHHHHHHHHHHHHHhh---h-------hhcccchhhhhc--chHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc Q lcl|Aclame:pro 305 SALNRYLRPAISELEYKLS---D-------HISVNMRPAIDP--LGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD 372 (392) Q Consensus 305 ~~l~p~l~~i~~~l~~~l~---~-------~~~~d~~~~~~~--~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e 372 (392) ..|.-++..+++++++.|- . ...+.+...|.. ........+-.++..|.++....++.|.+.|+.+.| T Consensus 371 S~L~~~a~~le~al~~~l~~~a~wlg~~~~~~~v~in~dF~~~~~~~~~~~al~~a~~~G~is~~t~~~~L~r~gvl~~d 450 (513) T protein:vir:97 371 SDLSAMTGLFEDALAQALDITADWLRLGPNGGTVELVKDYDLEEMDAPGLQALQVAREKRDISRKTYLNGLRLRGVLPED 450 (513) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccEEEeccccCcccCCHHHHHHHHHHHhCCCCCHHHHHHHHHhccCCCcc Confidence 5666677777777776652 1 123333333322 222345667788899999999999999888875322 Q ss_pred cc------cc----cC---CCCCCCCCCCCCCC Q lcl|Aclame:pro 373 LP------AP----EN---TNKKTTGQSNEPVP 392 (392) Q Consensus 373 ~~------~~----e~---~~~~~~gd~~~p~p 392 (392) +. .. ++ +......+.++++| T Consensus 451 ~d~~~~~e~~~~~~~~~~~~~~~d~~~~~~~~~ 483 (513) T protein:vir:97 451 FDEDEDWEELMEEISEAMGRAGLDLDPAQKNPP 483 (513) T ss_pred CCHHHHHHHHHHhhhhccCCCCccccccCCCCC Confidence 10 00 00 00000011122222 No 227 >protein:vir:80453 Length: 535 # NCBI annotation: BcepGomrgp05 # Family: family:all:584 # MgeID: mge:1882 # MgeName: BcepGomr # Cross-refs: genbank:acc:YP_001210225;genbank:gi:146329917;genbank:GeneID:5123562 Probab=70.40 E-value=0.21 Score=24.30 Aligned_cols=369 Identities=10% Similarity=0.016 Sum_probs=144.5 Q ss_pred Cc----------------chhhHhhccccccccc-cccccccccc-c---hhhhhhhhcCCCCcccchhhhhcchHHHHH Q lcl|Aclame:pro 1 MI----------------LPILNFINQTNDPPEV-GSVQSYFPDG-N---DAQIMESLLGDNNEWVSARAALRNSDLFSI 59 (392) Q Consensus 1 m~----------------Mg~~~~~~~~~~~~~~-~~~~~~~~~~-~---~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~ 59 (392) |. .-+-+.+......... ..+=+..+.. . ...-+... - ..|.-.+.+... T Consensus 32 m~dV~~~hp~y~a~~~~W~~ird~~~G~~~~r~~g~~YLP~~~~~~~~~E~~~~Y~~r--------l-~rA~~~n~~~~t 102 (535) T protein:vir:80 32 LPNVGYQRVEFGEMLPKWRKIMDCLSGQEAIKAKREEYLPMPSVDSRDEEQRRRYETY--------L-QRAIFYNVTART 102 (535) T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHhcChHHHHhcccccCCCCCcccCCcCCHHHHHHH--------H-hhccCCChhHHH Confidence 22 1111211111000000 0000000000 0 00000000 0 011222445556 Q ss_pred HHHHHHhhhhCceeeeccccc--cccccC-CccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCc-------------eEE Q lcl|Aclame:pro 60 ILQLSSDLAIVKINAEKKKNQ--GIIDNP-STNANKHGFWQSMFAQLLLGGEAFAYRWRNANGA-------------DMK 123 (392) Q Consensus 60 i~~ia~~ia~~p~~~~~~~~~--~~~~~P-N~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~-------------~~~ 123 (392) ++.++..+-+-|..+ +-... .+...- -...+-.+|.+.++...+.+|-+++++.....|. |. T Consensus 103 l~~l~G~vfrk~p~~-~~p~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~iLVD~P~~~~~~t~ade~~~~~rPy- 180 (535) T protein:vir:80 103 LDGMMGQVFSRDPIR-QLPPALEAIVEDIDGEGVSLDQQAKKALGYTMGFGRAAIFTDYPNVGRPVTVLEQKLGLYRPT- 180 (535) T ss_pred HHHHhchhhcCCcce-eccHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEeecCCCCcccHHHHHhcCCCcE- Confidence 666666554445433 11111 112111 2345888999999999999999999987654442 11 Q ss_pred EEEecccc-----------------------ceeeecCccceEEEEEE---e-------------cCcc--e---eee-- Q lcl|Aclame:pro 124 WEYLRPSQ-----------------------VNTYYFEYENGMYYNIT---F-------------DDPK--I---EPI-- 157 (392) Q Consensus 124 l~~l~~~~-----------------------v~~~~~~~~~~~~~~~~---~-------------~~~~--~---~~~-- 157 (392) +..+.|.. +...-+.++......|. . .... . ... T Consensus 181 ~~~y~ae~IinW~~~~v~G~~~Lt~v~lrE~~~~~dd~f~~~~~~q~RvL~~~~~G~y~v~~~~~~~~~~~~~~~~~~~~ 260 (535) T protein:vir:80 181 ITLVHPTSIINWRTKLVGGKSVISLVVIQENVLAQDDGFETTYVQQWRVLQLNAEGNYQVERWRRETQEEMYYSYSKHVP 260 (535) T ss_pred EEEechhhccCccccccCCccceeEEEEEEEEEecCCCcccceeEEEEEEEecCCceEEEEEEEeecCCccccccceeec Confidence 11111111 11101111111110000 0 0000 0 000 Q ss_pred -----EEEeceeEEEecCCCcccccccCCHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHH Q lcl|Aclame:pro 158 -----LQAPQSDLIHMKLLSIDGGKTGISPLYSLRR-ESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRS 231 (392) Q Consensus 158 -----~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~-~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~ 231 (392) ..+..-.++++- ....+...|.+|+..++. .+........+. ..+...+.|-.+++-....... ...+-. T Consensus 261 ~~~g~~~l~~IPfv~~~-~~~~~~~~~~pPLl~LA~lni~Hy~~ssd~~-~il~~~~~P~l~i~G~~~~~~~--~~~~~~ 336 (535) T protein:vir:80 261 TDGNGNPFKEIPFQFIG-PLDNNADIDHPPLLDLCEVNIGHYRNSADYE-EMAFVAGQPTAFFTGLTKDWVE--DVFKDF 336 (535) T ss_pred ccCCCcccCeeEEEEee-cCCCCCCCCccchHHHHHHHHHHhhchhHHH-HHHHHhcCceeeeecCchhhhh--cCCCCc Confidence 011111222222 223455678888877765 333333333433 3344455666665532211100 000000 Q ss_pred HHHhccccCCceeeccCCc--eEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHH-HHHHHHHH Q lcl|Aclame:pro 232 RSFMKRSRSGGPVVLDDLE--EFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQIS-GMYASALN 308 (392) Q Consensus 232 ~~~~~~~~~g~~~vl~~g~--~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~-~~~~~~l~ 308 (392) .-..| +...+.+++|. +|..++.+.-..+.++.++.....+.+.+-+. .....+.+....+ +--...|. T Consensus 337 ~i~iG---~~~~~~lP~~~~~~~~e~~~~~~a~~~l~~~e~qM~~lGa~ll~~-----~~~~~Ta~~a~~~~~~~~S~L~ 408 (535) T protein:vir:80 337 KVHLG---SRAIIPLPQGATAGILQITPNSVPFEAMTHKESQMIAMGANLLVK-----SGGNRTFGEAQQEEASEQSILS 408 (535) T ss_pred ceEec---CcccccCCCCCCcceeeeccchhHHHHHHHHHHHHHHHHHHhhcc-----CcccccHHHHHHHHHHHhHHHH Confidence 01122 23455676554 44555544433343433333322222222111 1112222222221 11245666 Q ss_pred HHHHHHHHHHHHHhh---hh---------hcccc--hhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccc Q lcl|Aclame:pro 309 RYLRPAISELEYKLS---DH---------ISVNM--RPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLP 374 (392) Q Consensus 309 p~l~~i~~~l~~~l~---~~---------~~~d~--~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~ 374 (392) -++..+++++++.|- .. +.+.+ ++............+-.++++|.++....++.|.+.|+...++. T Consensus 409 ~~a~~le~al~~aL~~~A~w~G~~~~~~~~~i~~n~dF~~~~ld~~~~~all~~~~~G~Is~et~~~~L~r~gvl~~~~~ 488 (535) T protein:vir:80 409 ACTKNVSMAFRKALRWANQFQTGIVNDETVEYNLNTDFPAARLTPNERAELILEWQQGAITFKEMRAGLRRAGVASEDDA 488 (535) T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccCCCceEEEeccccccccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCCCCcccc Confidence 677777777776552 11 11222 22112222234555678888999999999999988887632211 Q ss_pred ------cc--c--CC--------CCCCCCCCCCCCC Q lcl|Aclame:pro 375 ------AP--E--NT--------NKKTTGQSNEPVP 392 (392) Q Consensus 375 ------~~--e--~~--------~~~~~gd~~~p~p 392 (392) ++ | +. ++-.+|+...|.= T Consensus 489 ~eee~~ri~~E~~~~~~~~g~~~d~~~~g~~~~~~~ 524 (535) T protein:vir:80 489 KAETEGKATVEFIAKTAAAGKVGDAASGGTNKAKLN 524 (535) T ss_pred hHHHHHHHHhhhhhccccCCCCCCCCCCCCCcCccc Confidence 11 1 11 1112222222222 No 228 >protein:vir:96783 Length: 488 # NCBI annotation: putative structural protein # Family: family:all:584 # MgeID: mge:1629 # MgeName: phiHSIC # Cross-refs: genbank:acc:YP_224240;genbank:gi:62362375;genbank:GeneID:3345722 Probab=67.59 E-value=0.25 Score=23.89 Aligned_cols=370 Identities=10% Similarity=0.020 Sum_probs=152.3 Q ss_pred CcchhhHhhcccccc--cccc-cccccccccchhhhhhhhcCCCC---cccchhhhhcchHHHHHHHHHHHhhhhCceee Q lcl|Aclame:pro 1 MILPILNFINQTNDP--PEVG-SVQSYFPDGNDAQIMESLLGDNN---EWVSARAALRNSDLFSIILQLSSDLAIVKINA 74 (392) Q Consensus 1 m~Mg~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~ 74 (392) |.++.-.-++..... |+.. .......+.. ......... ....-+.|.=.+++..+++.++..+-+-|+.+ T Consensus 33 ~~d~g~~~~k~~g~~YLPk~~~~~~~~~~d~~----y~~~~~~~~~~y~~~~~~rA~~~n~~~~tl~~l~G~vfrk~p~~ 108 (488) T protein:vir:96 33 NLDCVMDNIKRKKQTYLPNLGAIPPEAKTDPK----VTALAAKIEKDWEDLTWRLANYVNIVNPTMNAITGAVMRREPEF 108 (488) T ss_pred hhhhhhHHHHHhhhhcCCCCCCccccccCcch----hhhhhccchhhhHhhhhhccccCchhHHHHHHhcchhhccCcee Confidence 222222111111000 0000 0000000000 000000000 00000122233566777888877777777766 Q ss_pred ecccc---cccccc-CCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCC-----------ceEEEEEeccccce------ Q lcl|Aclame:pro 75 EKKKN---QGIIDN-PSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANG-----------ADMKWEYLRPSQVN------ 133 (392) Q Consensus 75 ~~~~~---~~~~~~-PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G-----------~~~~l~~l~~~~v~------ 133 (392) ..... ..+... --...+-.+|.+.++...+.+|-+++++.....+ +|. +..+.|..|- T Consensus 109 ~~~~~~~l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~T~ade~~~~~rPy-~~~~~a~~IinW~~~~ 187 (488) T protein:vir:96 109 DTMDNPVLIGLRDNIDGKGNGIDQECKQALNALQWGSRCGWLVRSHPESATMADWNKGKKLPT-AAFYDALHIIDWEVEY 187 (488) T ss_pred ccCCcHHHHHHHhccCCCCCCHHHHHHHHHHHHHhcCeEEEEEecCCCcCCHHHHHHhcCCcE-EEEechhhhcCcceec Confidence 43321 112222 2245688899999999999999999998765432 121 1111111100 Q ss_pred ----------------eeecCcc---ceEEEEEEecCc-----------ceeeeE-------EEeceeEEEecCCCcccc Q lcl|Aclame:pro 134 ----------------TYYFEYE---NGMYYNITFDDP-----------KIEPIL-------QAPQSDLIHMKLLSIDGG 176 (392) Q Consensus 134 ----------------~~~~~~~---~~~~~~~~~~~~-----------~~~~~~-------~~~~~~vih~~~~~~~~~ 176 (392) ...+.++ ...+..+...++ ...+.+ .+..-.++++-. ...+. T Consensus 188 v~G~~~L~~v~lrE~~~~~D~~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~e~~~~~~g~~~l~~IP~v~~~~-~~~~~ 266 (488) T protein:vir:96 188 IDGEEKLTYLSLLEDYQERDGGTYVSKQRLINHRLVDGLCEFQEVTDDEYSDEWTPVLINSKQSDTIPFFLASS-QSNEW 266 (488) T ss_pred cCCceeeEEEEEEEEEEeccCCCcccceEEEEEEEECcEEEEEEEecCCcccceEeecCCCcccCeeEEEEEec-CCCCC Confidence 0111110 111111111110 000000 111112333322 23455 Q ss_pred cccCCHHHHHHH-HHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCC-ceeeccCC-ceEe Q lcl|Aclame:pro 177 KTGISPLYSLRR-ESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSG-GPVVLDDL-EEFT 253 (392) Q Consensus 177 ~~G~s~~~~~~~-~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~vl~~g-~~~~ 253 (392) ..|.+|+..++. .+.-......+....+ ..+.|..++...+. +.+ ... ... ..+..-.+ .+...+.| ++|. T Consensus 267 ~~~~pPLldLA~lnl~Hy~~ssd~~~il~-~~~~p~lv~~~~~~-~~~-~~~-~~~--~~g~~~~~~~~~~~~~g~~~~~ 340 (488) T protein:vir:96 267 CIDSTPLTSLAEISLSIYVMNAYSNKAMI-LANEAKWMVDMGDM-NKT-MAS-EMN--PLGFTLAGRMPYYVKNGDVKVI 340 (488) T ss_pred CCCCCchHHHHHHHHHHHhhhhHHHHHHH-hcCCceeeeccCCC-Ccc-ccc-ccc--cceeeecccccccccCCceeec Confidence 668888877655 5555555556654444 55567666544331 111 110 000 01221111 22233334 5566 Q ss_pred ecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHH-HHHHHHHHHHHHHHHHHHHHHHhh---h----- Q lcl|Aclame:pro 254 ALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQI-SGMYASALNRYLRPAISELEYKLS---D----- 324 (392) Q Consensus 254 ~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~-~~~~~~~l~p~l~~i~~~l~~~l~---~----- 324 (392) +.+.+.--.+-++.++.....+.+ .++......+...... ...-...|.-++..+++++++.|. . T Consensus 341 e~~~~~l~~~~l~~l~~qm~~~Ga------~l~~~~~~~Ta~~~~~~~~~~~S~L~~~a~~le~al~~~l~~~A~w~g~~ 414 (488) T protein:vir:96 341 QAQFSPETENKVEKLFEQAVKVGA------SLFTQQSNETATGAAIRSGSSTASMATLGNNVEDTVRNMLRFIMRYFEGT 414 (488) T ss_pred CCchhHHHHHHHHHHHHHHHHHhH------hhccCCCcchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcCCC Confidence 655433211222222222222222 2232111112111122 222356777788888888877652 1 Q ss_pred -------hhcccchhhhh--cchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 325 -------HISVNMRPAID--PLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 325 -------~~~~d~~~~~~--~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p~p 392 (392) ..++++...|. .........+-.++.+|.++....++.|.+.|+...|...-+....++.+ .++ T Consensus 415 ~~~~~~~~~~~~in~dF~~~~ld~~~~~al~~~~~~G~Is~~t~~~~L~~~gvl~~d~~~e~~~~~ie~~----g~~ 487 (488) T protein:vir:96 415 NLYVNPDELVFKLNRDYFDVEVNPQMLQVAYAAMMEGNLPQVSWFELLKRARVVRGDMSKEEFDEHIAEL----GFG 487 (488) T ss_pred CCCcCccceEEEeccCCCCccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCcCCccCCHHHHHHHHhhc----CCC Confidence 12233332222 12233456677888999999999999999988864332111111111110 111 No 229 >protein:vir:104892 Length: 558 # NCBI annotation: T4-like capsid assembly protein # Family: family:all:1036 # MgeID: mge:1630 # MgeName: P-SSM2 # Cross-refs: genbank:acc:YP_214363;genbank:gi:61806003;genbank:GeneID:3294412 Probab=64.65 E-value=0.3 Score=23.48 Aligned_cols=383 Identities=11% Similarity=0.107 Sum_probs=147.4 Q ss_pred c-hhhHhhcccccccccccccccccccchhhhh--------hhhcCCCCcc------c-chhhhhcchHHHHHHHHHHHh Q lcl|Aclame:pro 3 L-PILNFINQTNDPPEVGSVQSYFPDGNDAQIM--------ESLLGDNNEW------V-SARAALRNSDLFSIILQLSSD 66 (392) Q Consensus 3 M-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~------v-~~~~a~~~~~v~~~i~~ia~~ 66 (392) | .||.|............ .++.++..+.+.- ..+.+..+.. | .-+..+.+|.|..||+.|.+. T Consensus 1 m~~lfgf~~~~~~~~~~~~-~s~~~p~~ddg~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~pEvd~Av~eIVne 79 (558) T protein:vir:10 1 MAKLFGFSIEETQKKSTSI-ISPVPKNNEDGVDNFISSGFYGQYVDIEGAYRSEYDLIRRYREMALHPEADGAIEDVVNE 79 (558) T ss_pred CcchhcchhhhhhhhccCC-ccccCCCccccccceeccceeeeeecccchhhhHHHHHHHHHHHhhccchhhHHHHhhcc Confidence 4 45555443222211111 1222222221111 1111111111 1 123456789999999999998 Q ss_pred hhhCc-----eeee--ccc------------cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeecc---CCceEEE Q lcl|Aclame:pro 67 LAIVK-----INAE--KKK------------NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNA---NGADMKW 124 (392) Q Consensus 67 ia~~p-----~~~~--~~~------------~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~---~G~~~~l 124 (392) +.-+. +.+- ..+ .+.++.--|-...+ ..++.+|...|..|..++-+. ..-+.+| T Consensus 80 aiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~ll~F~~~~----~e~fR~WYVDgRiyfHKiid~k~pk~GI~EL 155 (558) T protein:vir:10 80 AIVSDLYDSPVEVELSNLNASNTLKKKIREEFRYIKEMMDFDKKS----HEIFRNWYVDGRVFYLKVIDTKNPQEGIQDL 155 (558) T ss_pred eeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHHhccchhh----hHHHhhheeeeEEEEEEEEeCCCccccceee Confidence 75331 1110 000 00011111222233 345677788999998886543 2348899 Q ss_pred EEeccccceeeecC----------------cc------ceEEEEEEecCc---------ceeeeEEEeceeEEEecC--C Q lcl|Aclame:pro 125 EYLRPSQVNTYYFE----------------YE------NGMYYNITFDDP---------KIEPILQAPQSDLIHMKL--L 171 (392) Q Consensus 125 ~~l~~~~v~~~~~~----------------~~------~~~~~~~~~~~~---------~~~~~~~~~~~~vih~~~--~ 171 (392) ..|+|..+..+..- .+ ...|+.|..... ..+..+.++.+-|.+... . T Consensus 156 r~lDPr~i~~Vr~i~~~~~~~~~~~~~~~~~~~~~~~~~~eyy~Y~~~~~~~~~~~~~~~~~~~vkI~~dAI~y~hSGL~ 235 (558) T protein:vir:10 156 RYIDPLKIKFIRQEKRKPGNQDPAIRVRSEQDVVPNPEFEEFYIYTPKVQHPTGMVGQMGGKNSIKIAKDSITMCTSGLV 235 (558) T ss_pred eeeCcccceeeeeeccccccccceeeeecccceeeccceeEeeeecCCcccccccceeecCCCceeechhheeeecccce Confidence 99999998654321 01 011221211100 112234445444433321 1 Q ss_pred CcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch---HHHHHHHHHHHhc----------cc Q lcl|Aclame:pro 172 SIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS---DKDKASRSRSFMK----------RS 238 (392) Q Consensus 172 ~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~---~~~~~~~~~~~~~----------~~ 238 (392) +.++. .=+|-|..+.+.+....-++...--+=-..+.-+=|..++=+.... ++-.+.....+.. .. T Consensus 236 d~~~~-~i~syLhkAIKp~NQLkmlEDAlVIYRitRAPERRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ 314 (558) T protein:vir:10 236 DRNKN-RVLSYLHKAIKALNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKVKAEQYLKEVMSRYRNKLVYDANTGEVR 314 (558) T ss_pred ecCCC-eeeecchHhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceec Confidence 22222 2256677666666555544444333222222222233333222221 1112222222221 01 Q ss_pred cCCcee-ec----------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc--chHH--HHHHHH Q lcl|Aclame:pro 239 RSGGPV-VL----------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQ--QISGMY 303 (392) Q Consensus 239 ~~g~~~-vl----------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~--~~~~--~~~~~~ 303 (392) +..+.+ .| ..|.+++.|.... .+.=++-.++..+....+++||.+-|+..+..+ .+.+ --+-=+ T Consensus 315 ddrk~msMlEDyWLpRReGgrgTEItTLpGgq-nLgem~DV~YF~kKLy~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF 393 (558) T protein:vir:10 315 DDRKFMSMMEDFWLPRREGGRGTEITTLPGGQ-NLGELSDVDYFQKKLYRALGVPESRIAAEGGFNLGRSSEILRDELKF 393 (558) T ss_pred ccchhhhhHhhhcccccCCCCccceeeccccC-CcchHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHH Confidence 111111 11 2356666665433 222244566777899999999999997543322 1111 112223 Q ss_pred HHHHHHHHHHHHHHHHHHhhhh--------------hcccchhhhhcchH--H------HHHHHHHHHh-----CCCcCH Q lcl|Aclame:pro 304 ASALNRYLRPAISELEYKLSDH--------------ISVNMRPAIDPLGD--N------YLSTISTATR-----WGALAE 356 (392) Q Consensus 304 ~~~l~p~l~~i~~~l~~~l~~~--------------~~~d~~~~~~~~~~--~------~~~~~~~~~~-----~g~~T~ 356 (392) ..+|.-+-......|..-|-+. +.-++...+..|.. + +...++.+-+ +..++. T Consensus 394 ~KFI~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~ 473 (558) T protein:vir:10 394 AKFVGRLRKRFAAMFNDMLKTQLVLKNIVTPEDWKTMEDHIQYDFLYDNQFAELKESELMEGRLGMLATIEPYIGKYYST 473 (558) T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhccccch Confidence 3444443333333333222111 00111111111111 1 1111111111 223333 Q ss_pred HHHHHHH------------------HhCCCC--ccccccccCCCCCCCCCCCC-------CCC Q lcl|Aclame:pro 357 NQATFVL------------------QEAGYI--PKDLPAPENTNKKTTGQSNE-------PVP 392 (392) Q Consensus 357 nE~R~~l------------------~~~g~~--~~e~~~~e~~~~~~~gd~~~-------p~p 392 (392) +=+|+.. .+.|.- |++.-.+.+.+-..+||... +-| T Consensus 474 dyi~k~ILr~tDeeI~~~~kqI~~E~k~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (558) T protein:vir:10 474 EYVRKRVLRQTDMEIEEIDTQIEDEIQKGIIPDPSQIDPITGEPLPQEGDPAMEGMGEQPVDP 536 (558) T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHhCCCCCCccccChhhccccCccCCchhccCCCCCccc Confidence 3332211 134532 33221122111111222221 111 No 230 >protein:vir:9922 Length: 489 # NCBI annotation: hypothetical protein # Family: family:all:125 # MgeID: mge:178 # MgeName: 315.6 # Cross-refs: genbank:acc:NP_795684;genbank:gi:28876464;genbank:GeneID:1257980 Probab=63.43 E-value=0.32 Score=23.32 Aligned_cols=377 Identities=14% Similarity=0.079 Sum_probs=142.1 Q ss_pred Ccc---hhhHhhccccccc-c-cccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeee Q lcl|Aclame:pro 1 MIL---PILNFINQTNDPP-E-VGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAE 75 (392) Q Consensus 1 m~M---g~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~ 75 (392) +.. -+.+++.+..... . -......+ .+...-............ ..-+..+-..-+|+..++-+-.-|+++- T Consensus 13 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~yy-~g~~~i~~~~~~~~~~~~---~~ki~~n~~~~iv~~~~~~l~g~~~~~~ 88 (489) T protein:vir:99 13 SKLWIDQLKNYISRFKAEQLERLKELKRYY-LGDNNIKYRPAKTDKYAA---DNRIASDFAKYITVFEQGYMLGVPVEYK 88 (489) T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-cccCccccccccccccCC---cceeecchHHHHHHHHhhhhccCCceee Confidence 221 0122222111000 0 00000000 011000000000000000 0012233445566666665544565543 Q ss_pred cccc--ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEee----ccCCceEEEEEeccccceeeecCcc-c-eEEE-- Q lcl|Aclame:pro 76 KKKN--QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWR----NANGADMKWEYLRPSQVNTYYFEYE-N-GMYY-- 145 (392) Q Consensus 76 ~~~~--~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r----~~~G~~~~l~~l~~~~v~~~~~~~~-~-~~~~-- 145 (392) -.+. ...+.+=........+...+....+.+|.+|.++.. +.+|+ ..+..++|..+.+..++.. + ..+. T Consensus 89 ~~d~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~G~~~~~v~~~~~~d~~~~-~~i~~~~p~~~~~v~dd~~~~~~~~~i~ 167 (489) T protein:vir:99 89 NENKDLQAAIDLMSVRNNEDYHNVKIKTDLSIYGRAYELLTVEKIDDKKTE-VKLYQLPAEQTFVIYDDTYQRNSLMAVH 167 (489) T ss_pred cCChhHHHHHHHHHhhcChhHHHHHHHHHHhhCCeEEEEEeeccCcCCCcc-eEEEEEcccceEEEEcCCCCCceEEEEE Confidence 2221 111111111122334456788888999999977653 33444 3477788888877765433 1 2211 Q ss_pred EEEecCc--c-eeeeEEEeceeE----------------------------EEecCCCcccccccCCHHHHHHHHHHHHH Q lcl|Aclame:pro 146 NITFDDP--K-IEPILQAPQSDL----------------------------IHMKLLSIDGGKTGISPLYSLRRESKIQR 194 (392) Q Consensus 146 ~~~~~~~--~-~~~~~~~~~~~v----------------------------ih~~~~~~~~~~~G~s~~~~~~~~i~~~~ 194 (392) ++..... . ......+.++.+ +|++++ ..|.|.+..+...++... T Consensus 168 ~~~~~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~vPvv~~~n~-----~~~~s~~~~v~~liDa~d 242 (489) T protein:vir:99 168 FYDIDYGSGKRKQIIKAYTSDTIYTYEDYNLETKGMRLKDYEGHFFKGVPVNEYANN-----EERTGAYESVLDNIDAYD 242 (489) T ss_pred EEEEecCCCceEEEEEEEeCCcEEEEEecCCCcccceecccccccCCceeEEEeecC-----CCCCCchhhhHHHHHHHH Confidence 1111110 0 001112223333 333321 236677766666665555 Q ss_pred HHHHHHHHHHHcCCCcceEEEeCCCCCch-HHHHHHHHHH------HhccccCCceeeccCC-------ceEeecccChh Q lcl|Aclame:pro 195 ASDRLTISSLNSSLNVPGVLTVKGGGLLS-DKDKASRSRS------FMKRSRSGGPVVLDDL-------EEFTALEIKSN 260 (392) Q Consensus 195 ~~~~~~~~~~~ng~~~~~il~~~~~~~~~-~~~~~~~~~~------~~~~~~~g~~~vl~~g-------~~~~~l~~~~~ 260 (392) .+.....+.....+.|-.+++........ .+....+... .......++++.++.+ .+.+-+..... T Consensus 243 ~~~s~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 322 (489) T protein:vir:99 243 LSQSELANFQQDSVNALLVIAGNAYTGADENDYLDDGRLNPNGRLAISIGFKKAQVLILDDNPNPNGVKPQAYFLKKEYD 322 (489) T ss_pred HHHHHHHHHHHHhhhhhhhhccCCcccccchhhhhhcccccccccccccccccceeeeeccccCccccccceeeeeecCC Confidence 54444433333333343333321111111 1111111100 0011122334444332 23333433334 Q ss_pred hHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHH--------------HHHHHHHHHHHHHHHHHHHHhh--- Q lcl|Aclame:pro 261 VAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISG--------------MYASALNRYLRPAISELEYKLS--- 323 (392) Q Consensus 261 d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~--------------~~~~~l~p~l~~i~~~l~~~l~--- 323 (392) +..+....+...+.|...-++|..-..... ++.+..+.+. .+...+...++.+.+.+...-. T Consensus 323 ~~~~~~~~~~l~~~i~~~s~~p~~~~~~~~-~n~Sg~Al~~~~~~l~~k~~~k~~~~~~~l~~~~~li~~~~~~~~~~~~ 401 (489) T protein:vir:99 323 TAGSEAYKNRLVADILRFTFTPDTQDMKFS-GVQSGESMKYKLMASDNYREKQERLFKKGLMRRLRLAANIWAIKGNEAT 401 (489) T ss_pred hHHHHHHHHHHHHHHHHHhCCccccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccc Confidence 444556677788899999999864322111 1222222221 2222233333322222211100 Q ss_pred -----hhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc----cccc-------cCC-CCCCCC- Q lcl|Aclame:pro 324 -----DHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD----LPAP-------ENT-NKKTTG- 385 (392) Q Consensus 324 -----~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e----~~~~-------e~~-~~~~~g- 385 (392) .++++.+..-+..+..+.+..+..+ .|+++...+.+++ .++...| +.++ ..+ .....| T Consensus 402 ~~~~~~~i~v~f~~~~p~d~~~~~~~~~kl--~giis~et~~~~l--~~v~~~d~~~E~~ri~~E~~~~~~~~~~~~~~~ 477 (489) T protein:vir:99 402 TYSLVNDTSIVFTPNLPQNDNEIVTAAQNL--YGIVSDQTIFEIL--NTVTGVDAEAELKRLKEEADKKQSLPEPRLVGD 477 (489) T ss_pred cccccccceEEeCCCCCcCHHHHHHHHHHH--hccCCHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHhccccccccCC Confidence 0122222222233455566666665 4889988777665 1222211 2111 001 111111 Q ss_pred --CCCCCCC Q lcl|Aclame:pro 386 --QSNEPVP 392 (392) Q Consensus 386 --d~~~p~p 392 (392) ++.+|.| T Consensus 478 ~~~~~~~~~ 486 (489) T protein:vir:99 478 ASGQEEPTA 486 (489) T ss_pred CCCCcCCCC Confidence 2223333 No 231 >protein:vir:94709 Length: 522 # NCBI annotation: head to tail connector # Family: family:all:481 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338118;genbank:gi:77118196;genbank:GeneID:3707732 Probab=61.88 E-value=0.35 Score=23.12 Aligned_cols=330 Identities=11% Similarity=0.015 Sum_probs=128.7 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhh---------------hhhc---CCCCc-ccchhhhhcchHH----H Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIM---------------ESLL---GDNNE-WVSARAALRNSDL----F 57 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~---~~~~~-~v~~~~a~~~~~v----~ 57 (392) ++..+. +-.... . ...... .+++..... .||. ..... ....+. .....| . T Consensus 38 lP~~~~-~~~~~~---~-~~~~~~-~dst~~~a~~~Las~l~~~ltP~~~WFrl~~~d~~~~~~~~~~-~~~~~v~~~L~ 110 (522) T protein:vir:94 38 IPSLFP-KESDNS---S-TEYTTP-WQAVGARCLNNLAAKLMLALFPQSPWMRLTVSEYEAKTLSQDS-EAAARVDEGLA 110 (522) T ss_pred cccccC-CCCCcc---c-cccccc-ccccHHHHHHHHHHHHHhhcCCCCcccccccchhhhhccCccc-chhHHHHHHHH Confidence 443211 000000 0 000000 011111100 1110 00000 000000 000111 2 Q ss_pred HHHHHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceE--EEEEeccccceee Q lcl|Aclame:pro 58 SIILQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADM--KWEYLRPSQVNTY 135 (392) Q Consensus 58 ~~i~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~--~l~~l~~~~v~~~ 135 (392) .|-+.+-..+. +-| .+.=+.....+|+.+||+.+++..+..|.+. ..+|+. .+-+. T Consensus 111 ~ve~~~~~~~~----------------~sn----f~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~~~~~~pl~--~y~v~ 168 (522) T protein:vir:94 111 MVERVLMAYME----------------TNS----FRVPLFEALKQLIVSGNCLLYIPEPEQGTYSPMRMYRLV--SYVVQ 168 (522) T ss_pred HHHHHHHHHHH----------------hcC----cHHHHHHHHHHHHhhCcEeEeeeccCCCceeeEEEEEcc--eEEEe Confidence 22222222222 222 2333456788888899999988776666544 344543 23332 Q ss_pred ecCccce--EEEEEEe--------------------------------cCcc-------eee-------eEEEeceeEEE Q lcl|Aclame:pro 136 YFEYENG--MYYNITF--------------------------------DDPK-------IEP-------ILQAPQSDLIH 167 (392) Q Consensus 136 ~~~~~~~--~~~~~~~--------------------------------~~~~-------~~~-------~~~~~~~~vih 167 (392) .+..|+. ++....+ .... .+. ...+..-.++. T Consensus 169 ~d~~G~vd~i~r~~~~~~~~l~~~~~~~~~~~~~~p~~~v~v~~~v~~~~~~~~~~~~~~g~~~~~~~~~~~~~e~P~~~ 248 (522) T protein:vir:94 169 RDAFGNILQIVTIDKVAFSALPEDVKSQLNADDYEPDTELEVYTHIYRQDDEYLRYEEVEGIEVTGTDGSYPLTACPYIP 248 (522) T ss_pred eCCCcCeEEEeeeeeccHHhcchHHHHHHhcccCCccceEEEEEEEEeeCCceeEEeeccCceecccCCCCccccCCcee Confidence 2222211 0000000 0000 000 01233344566 Q ss_pred ecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeecc Q lcl|Aclame:pro 168 MKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLD 247 (392) Q Consensus 168 ~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~ 247 (392) .+....+|..||.||...+...+.....+.+.......-...|..++.-++. ...+... .+. . +.++-+ T Consensus 249 ~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~~v~~~g~-~~~~~~~-------~~~--~-g~~v~g 317 (522) T protein:vir:94 249 VRMVRLDGEDYGRSYCEEYLGDLNSLETITEAITKMAKVASKVVGLVNPNGI-TQPRRLN-------KAA--T-GEFVAG 317 (522) T ss_pred eeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeccccc-ccchhee-------ccC--C-ceeecC Confidence 6666677888999999999999999999999998888888888755443222 2221111 011 1 112222 Q ss_pred --CCceEeecccChhhHHH-HHHHHHHHHHHHHHhcccHHHcCCcccccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 248 --DLEEFTALEIKSNVAQL-LSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSI-QQISGMYASALNRYLRPAISELEYKLS 323 (392) Q Consensus 248 --~g~~~~~l~~~~~d~~~-~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~-~~~~~~~~~~l~p~l~~i~~~l~~~l~ 323 (392) +++...++... .+.+. .+..+.....|-.+|-+.....-....-|.++ .....-....|.|.+..+.++|-.-|. T Consensus 318 ~~~~v~~~~~~~~-~~~~~~~~~i~~~~~rI~~af~~~~~~~~~~~r~TAtEV~~r~~E~~~~LG~v~~rl~~E~l~Pli 396 (522) T protein:vir:94 318 RVEDINFLQLTKG-QDFTIAKSVADAIEQRLGWAFLLNSAVQRNAERVTAEEIRYVAGELEATLGGVYSVQSQELQLPIV 396 (522) T ss_pred Ccccceeeecccc-cchhHHHHHHHHHHHHHHHHHhhhhhccCCCccccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH Confidence 23344444332 23443 45566677889889976632211112223322 233444556777777777776643322 Q ss_pred hh-hcc-cchhhhhcchHHHHHHHHHHHhCCCcCHH------HHHHHHHhCCCCccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 324 DH-ISV-NMRPAIDPLGDNYLSTISTATRWGALAEN------QATFVLQEAGYIPKDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 324 ~~-~~~-d~~~~~~~~~~~~~~~~~~~~~~g~~T~n------E~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p~p 392 (392) .. +.+ .....+..-..+ +++..+.|+= +..+.+. +.+..+..+ ...++ T Consensus 397 ~r~~~il~r~g~lP~~p~~-------~v~v~~~s~La~~qr~~~~~~l~---------~~~~~ia~l-----~P~~~ 452 (522) T protein:vir:94 397 RVLMNQLQSAGMIPDLPKE-------AVEPTVSTGLEALGRGQDLEKLT---------QAVNMMTGL-----QPLSQ 452 (522) T ss_pred HHHHHHHHhcCCCCCCCcc-------cEEeeEecHHHHHHHHHHHHHHH---------HHHHHHHhc-----cchhh Confidence 11 000 000000000000 0111111110 0000000 000000000 00122 No 232 >protein:vir:1538 Length: 535 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052106;swissprot:trembl:q9t110;genbank:gi:9634032;uniprot:Q9T110;genbank:GeneID:1262384 Probab=55.79 E-value=0.47 Score=22.38 Aligned_cols=338 Identities=13% Similarity=0.053 Sum_probs=125.7 Q ss_pred CcchhhHhhcccccccccccccccccccchhhh---------------hhhhcCCCCc-cc---ch---hhhhcchHHHH Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQI---------------MESLLGDNNE-WV---SA---RAALRNSDLFS 58 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~-~v---~~---~~a~~~~~v~~ 58 (392) .+. +|. ....... ...... .+++.... ..||.-.-+. .+ .. +.+.-...... T Consensus 40 lP~-~~~---~~~~~~~-~~~~~~-~dst~~~a~~~Laa~l~~~ltP~~~WF~l~~~d~~~~~~~~~~~~~~~v~~~L~~ 113 (535) T protein:vir:15 40 IPS-LFP---KESDNES-TDYTTP-WQAVGARGLNNLASKLMLALFPMQSWMKLTISEYEAKQLVGDPDGLAKVDEGLSM 113 (535) T ss_pred ccc-ccC---CCCCccc-cccccc-ccccHHHHHHHHHHHHHHhhcCCCcccccccChHHHhccCCCcchHHHHHHHHHH Confidence 221 111 0000000 000000 01111000 1111100000 00 00 00000011122 Q ss_pred HHHHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCC-ceEEEEEecccccee--- Q lcl|Aclame:pro 59 IILQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANG-ADMKWEYLRPSQVNT--- 134 (392) Q Consensus 59 ~i~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G-~~~~l~~l~~~~v~~--- 134 (392) |-+.+-..+. +-| .+.=+..+..+|+.+||+.+++..+..+ .....||+.--.|.. T Consensus 114 ve~~~~~~l~----------------~sn----f~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~f~~~pl~~~~v~~d~~ 173 (535) T protein:vir:15 114 VERIIMNYIE----------------SNS----YRVTLFECLKQLIVAGNALLYLPEPEGSYNPMKLYRLSSYVVQRDAY 173 (535) T ss_pred HHHHHHHHHH----------------hcC----cHHHHHHHHHHHHhhCceeEEeecCCCCceeeEEEEcCeeEEeeCCC Confidence 3333333332 222 2333456677888899987776544322 223344442111111 Q ss_pred --------------------------------------------eecCccceEEEEEEecCcce---eeeEEEeceeEEE Q lcl|Aclame:pro 135 --------------------------------------------YYFEYENGMYYNITFDDPKI---EPILQAPQSDLIH 167 (392) Q Consensus 135 --------------------------------------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~vih 167 (392) +++++++...++...++... .....+..-.++. T Consensus 174 G~vd~i~r~~~~t~~~l~~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~e~~g~~~~~~~~~~~~~~~P~i~ 253 (535) T protein:vir:15 174 GNVLQIVTRDQIAFGALPEDVRSAVEKAGGEKKMDEMVDVYTHVYLDEESGDYLKYEEVEDVEIDGSDATYPTDAMPYIP 253 (535) T ss_pred CCeeEEEEeEeecHHHHHHHHhHhhhccccccCCCCceeEEEEEEEecCCCcEEEEEEeeCccccccccccccccCCcee Confidence 11111222222221211111 0111233345666 Q ss_pred ecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeec- Q lcl|Aclame:pro 168 MKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVL- 246 (392) Q Consensus 168 ~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl- 246 (392) .+....+|..||.||...+...+.....+.+.......-...|..++..++. ....... .+.. +.++- T Consensus 254 ~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~lv~~~g~-~~~~~l~-------~~~~---g~~v~g 322 (535) T protein:vir:15 254 VRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNPAGI-TQPRRLT-------KAQT---GDFVPG 322 (535) T ss_pred eeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccc-ccchhcc-------cCCc---eeeecC Confidence 6777777888999999999999999999988888888888878765433221 1111111 0111 11222 Q ss_pred -cCCceEeecccChhhHH-HHHHHHHHHHHHHHHhcccHHHcCCcccccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 247 -DDLEEFTALEIKSNVAQ-LLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSI-QQISGMYASALNRYLRPAISELEYKLS 323 (392) Q Consensus 247 -~~g~~~~~l~~~~~d~~-~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~-~~~~~~~~~~l~p~l~~i~~~l~~~l~ 323 (392) .++....++...+ +.+ ..+..+..+..|-.+|-+.....-....-|.++ .....-....|.|.+..+.++|-.-|. T Consensus 323 ~~~~v~~~~~~~~~-~~~~~~~~i~~~~~~I~~af~~~~~~~~~~~r~TAtEV~~r~~E~~~~LG~v~~rl~~Ell~Pli 401 (535) T protein:vir:15 323 RREDIDFLQLEKQA-DFTVAKAVSDQIEARLSYAFMLNSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLV 401 (535) T ss_pred Ccccceeeeccccc-chhHHHHHHHHHHHHHHHHHhhhhcccCCCccccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH Confidence 2344444444433 333 345566677888888855521111112223222 233444556777777777766543322 Q ss_pred hhh-cc-cchhhhhcchHHHHHHHHHHHhCCCcCH------H-HHHHHHHhCCCCccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 324 DHI-SV-NMRPAIDPLGDNYLSTISTATRWGALAE------N-QATFVLQEAGYIPKDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 324 ~~~-~~-d~~~~~~~~~~~~~~~~~~~~~~g~~T~------n-E~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p~p 392 (392) ..+ .+ .....+..-..+ +++--+.|+ . ++-.++...+ .+-.+.|. ..|. .-.+ T Consensus 402 ~r~~~il~r~g~lP~~p~~-------~v~~~yis~La~aqr~~~~~~l~~~~~-------~la~~~P~-~ld~-~id~ 463 (535) T protein:vir:15 402 RVLLKQLQATSQIPELPKE-------AVEPTISTGLEAIGRGQDLDKLERCIS-------AWAALAPM-QGDP-DINL 463 (535) T ss_pred HHHHHHHHhcCCCCCCCcc-------ceeEEEecHHHHHHHHHHHHHHHHHHH-------HHHhcChh-hhhc-cCCH Confidence 110 00 000000000000 011111111 1 1111110000 00011110 0000 0111 No 233 >protein:vir:102239 Length: 527 # NCBI annotation: gp9 # Family: family:all:6920 # MgeID: mge:1648 # MgeName: PBI1 # Cross-refs: genbank:acc:YP_655205;genbank:gi:109522785;genbank:GeneID:4157478 Probab=54.01 E-value=0.51 Score=22.17 Aligned_cols=359 Identities=11% Similarity=0.024 Sum_probs=157.0 Q ss_pred CcchhhH----hhcccc--------ccccc--------ccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHH Q lcl|Aclame:pro 1 MILPILN----FINQTN--------DPPEV--------GSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSII 60 (392) Q Consensus 1 m~Mg~~~----~~~~~~--------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i 60 (392) |+.-.=. ++++.. +...- ...+.++.......+++.-...............-.-|.+++ T Consensus 21 ~p~~v~~~d~~Rl~aY~l~~~~y~n~~~~~~~~lrg~~~~~~r~~~~ps~~~~~~~~~~~~~~g~~~~~~~~~e~v~~~l 100 (527) T protein:vir:10 21 FPNAVTDFDKARLASYRLYEDMYLTNTSDYQVILRGGDEGDQRPIYVPNGEKLIEAKMRFLGQGLKWEFSKKDAKVDDAI 100 (527) T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCchhheeeecCCccccccceeeehhhHHhhCCcceeeccCccccccchhHHHHHHH Confidence 2221110 010000 00000 000011111010111110000000000000000001122222 Q ss_pred HHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC---CceEEEEEeccccceeeec Q lcl|Aclame:pro 61 LQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN---GADMKWEYLRPSQVNTYYF 137 (392) Q Consensus 61 ~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~---G~~~~l~~l~~~~v~~~~~ 137 (392) +..+. + ........+...+-+..|.+...+..|.. |.-+.+..++|..+-+..+ T Consensus 101 r~~~~-------------------~----e~l~~~~~~~~r~~~vlGDg~f~l~wD~~k~~~~R~~v~~~DP~~~f~~ed 157 (527) T protein:vir:10 101 RVLFD-------------------R----ENWEQKFESLKRWTEIRGDYVLLLIGDDEKDEGSRLSLHEVDPSTYFPYED 157 (527) T ss_pred HHHHH-------------------H----hhhHHHHHHHHHhhhhhcceeEEEeeccCCCcCCCceEeecCcceeeeeec Confidence 22211 1 12222345555666667777666665532 2233444444443333322 Q ss_pred Cccc--------------------------------------------eE-EEEEEec-----C-------------cce Q lcl|Aclame:pro 138 EYEN--------------------------------------------GM-YYNITFD-----D-------------PKI 154 (392) Q Consensus 138 ~~~~--------------------------------------------~~-~~~~~~~-----~-------------~~~ 154 (392) .++. .+ +....+. + ... T Consensus 158 ~d~~~~v~~v~~~~~~~~P~d~~~~~~~ar~~~~~~~l~~~g~~~~~G~~~yt~~~w~lg~w~d~~e~p~~~~~~~~~~~ 237 (527) T protein:vir:10 158 PRYPGQVLGVYLVDEYPHPDSEKKNEKCARVQKYMKTLDDDGKPVPGGAIKYTEELYEPGKWDDRPESPLEPDDIKKLST 237 (527) T ss_pred CCCCCceeeEEEeeeccCCccccccceehhhhhhhhhcCcccccccCcceeeeeceeeccccccccccccchhhhhhhcC Confidence 2111 10 0000000 0 000 Q ss_pred -----eeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHH Q lcl|Aclame:pro 155 -----EPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKAS 229 (392) Q Consensus 155 -----~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~ 229 (392) .....+.--.|+|+++.+..+...|.|-+.-+...+........-.....+=++.|-.+++. .. .-+..- + T Consensus 238 ~~~l~~lp~pi~fiPvV~~~t~p~~~~~WG~S~La~ll~l~deLn~~~Td~s~is~~sG~Pi~~~tg--~~-~vd~~G-~ 313 (527) T protein:vir:10 238 LTEEEPLPEQITTLPVFHFRGHPIMNAMFGRSGLAGLESLIASVNQTMTDEDLIMVFGGLGFYATDS--AP-PRDSRG-N 313 (527) T ss_pred ceeeecccCCCCccceEeecCCCccccccChhhHhHHHHHHHHHhhhhhHHHHHHHHhCCceeeecc--cc-cccccC-C Confidence 00112333356788877777777899999877766665555544444444445555444332 11 111000 0 Q ss_pred HHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 RSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNR 309 (392) Q Consensus 230 ~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p 309 (392) ... -.-..|.++-|+++.++.-++..+.-..+....+...+.|+.+=++|..-+|..+....-..... .-.+.| T Consensus 314 ~~~---~~VgPG~iweL~e~ak~~~v~~~~~la~~~~h~~~L~~~l~~vA~~PavA~G~vD~s~~~SG~AL---eL~L~P 387 (527) T protein:vir:10 314 MVP---WTISPLGMVEHGQNNKIYRVNGVASLEPSQTHMNKAEEAMQQTKGIPDIAVGVVDAAVAESGIAL---DLKLSA 387 (527) T ss_pred cCc---cccCCceeEecCCCcceeeccchhhhHHHHHHHHHHHHHHHHhhcCCeeeeccccCCcCcHHHHH---HHHHHH Confidence 000 01124466778999999999987766667777888889999999999999994332221111111 122333 Q ss_pred HHHHHHHH-H---------H-----HHhh-------hh------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 310 YLRPAISE-L---------E-----YKLS-------DH------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATF 361 (392) Q Consensus 310 ~l~~i~~~-l---------~-----~~l~-------~~------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~ 361 (392) ++...++. + . ..|. .+ +++.+...+..+.+...+++.+++++|++++-=|-+ T Consensus 388 Llar~~rk~L~~~~Vqrq~~~~~~~~~L~aye~v~~~d~~~~~~v~ivf~p~lP~D~~avie~v~tL~~aGiiS~etAv~ 467 (527) T protein:vir:10 388 ILSSCAEQELELKSVLKQFFYNLVTQWLPAYEGVGIDDADKKLTVTITFRDPKPVNNEKRFAQLLELWEAGLIPAKKLTE 467 (527) T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhcccCCCccccceEEEecccCCCCHHHHHHHHHHHHHcCchhHHHHHH Confidence 33222111 1 0 1110 11 122223334456677888999999999999998888 Q ss_pred HHHhCCCC-cc--ccc---------------cccCC----------CCCCCCCCCCCCC Q lcl|Aclame:pro 362 VLQEAGYI-PK--DLP---------------APENT----------NKKTTGQSNEPVP 392 (392) Q Consensus 362 ~l~~~g~~-~~--e~~---------------~~e~~----------~~~~~gd~~~p~p 392 (392) +|...|+. .. |++ +..+. +.-...|+.+|+| T Consensus 468 ~L~~~~g~eD~E~E~~~I~~era~~a~a~a~a~~~~~a~~~~~~g~~~~~~d~~~~~~~ 526 (527) T protein:vir:10 468 ELSKIMGFELTEEDFRQATEDKKTQGIAQAEAADPFGAQMAAEQGIPDEEDDQALNGQP 526 (527) T ss_pred HHHhccCCCchHHHHHHHHHHHHHHhHHhhhhcCchhhhhccccCCCCCCcccccCCCC Confidence 88777662 21 111 11111 1112235567888 No 234 >protein:vir:101494 Length: 527 # NCBI annotation: gp9 # Family: family:all:6920 # MgeID: mge:1627 # MgeName: PLot # Cross-refs: genbank:acc:YP_655388;genbank:gi:109522576;genbank:GeneID:4157566 Probab=53.59 E-value=0.52 Score=22.12 Aligned_cols=359 Identities=12% Similarity=0.027 Sum_probs=157.0 Q ss_pred CcchhhH----hhcccc--------ccccc--------ccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHH Q lcl|Aclame:pro 1 MILPILN----FINQTN--------DPPEV--------GSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSII 60 (392) Q Consensus 1 m~Mg~~~----~~~~~~--------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i 60 (392) |+.-.=. ++++.. +...- ...+.++.......+++.-...............-.-|.+++ T Consensus 21 ~p~~v~~~d~~Rl~aY~l~~~~y~n~~~~~~~~lrg~~~~~~r~~~~ps~~~~~~~~~~~~~~g~~~~~~~~~e~v~~~l 100 (527) T protein:vir:10 21 FPNAVTDFDKARLASYRLYEDMYLTNTSDYQVILRGGDEGDQRPIYVPNGEKLIEAKMRFLGQGLKWEFSKKDAKVDDAI 100 (527) T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCchhheeeecCCccccccceeeehhhHHhhCCcceeeccCccccccchhHHHHHHH Confidence 2221110 010000 00000 000011111010111110000000000000000001122222 Q ss_pred HHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC---CceEEEEEeccccceeeec Q lcl|Aclame:pro 61 LQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN---GADMKWEYLRPSQVNTYYF 137 (392) Q Consensus 61 ~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~---G~~~~l~~l~~~~v~~~~~ 137 (392) +..+ .+ ........+...+-+..|.+...+..|.. |.-+.+..++|..+-+..+ T Consensus 101 r~~~-------------------~~----e~l~~~~~~~~r~~~vlGDg~f~l~wD~~k~~~~R~~v~~~DP~~~f~~ed 157 (527) T protein:vir:10 101 KVLF-------------------DR----ENWEQKFESLKRWTEIRGDYVLLLIGDDEKDEGSRLSLHEVDPSTYFPYED 157 (527) T ss_pred HHHH-------------------HH----hhhHHHHHHHHHhhhhhcceeEEEeeccCCCcCCCceEeecCcceeeeeec Confidence 2211 11 12222345555666667777666665532 2233444444443333322 Q ss_pred Cccc--------------------------------------------eE-EEEEEec-----C-------------cce Q lcl|Aclame:pro 138 EYEN--------------------------------------------GM-YYNITFD-----D-------------PKI 154 (392) Q Consensus 138 ~~~~--------------------------------------------~~-~~~~~~~-----~-------------~~~ 154 (392) .++. .+ +....+. + ... T Consensus 158 ~d~~~~v~~v~~~~~~~~P~d~~~~~~~ar~~~~~~~l~~~g~~~~~G~~~yt~~~w~lg~w~d~~e~p~~~~~~~~~~~ 237 (527) T protein:vir:10 158 PRYPGQVLGVYLVDEYPHPDSEKKNEKCARVQKYMKTLDDDGKPVPGGAIKYTEELYEPGKWDDRPESPLEPDDIKKLST 237 (527) T ss_pred CCCCCceeeEEEeeeccCCccccccceehhhhhhhhhcCcccccccCcceeeeeceeeccccccccccccchhhhhhhcC Confidence 2111 10 0000000 0 000 Q ss_pred -----eeeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHH Q lcl|Aclame:pro 155 -----EPILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKAS 229 (392) Q Consensus 155 -----~~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~ 229 (392) .....+.--.|+|+++.+..+...|.|-+.-+...+........-.....+=++.|-.+++. .. .-+..- + T Consensus 238 ~~~l~~lp~pi~fiPvV~~~t~p~~~~~WG~S~La~ll~l~deLn~~~Td~s~is~~sG~Pi~~~tg--~~-~vd~~G-~ 313 (527) T protein:vir:10 238 LTEEEPLPEQITTLPVFHFRGHPIMNAMFGRSGLAGLESLIASVNQTMTDEDLIMVFGGLGFYATDS--AP-PRDSRG-N 313 (527) T ss_pred ceeeecccCCCCccceEeecCCCccccccChhhHhHHHHHHHHHhhhhhHHHHHHHHhCCceeeecc--cc-cccccC-C Confidence 00112333356788877777777899999877766665555544444444445555444332 11 111000 0 Q ss_pred HHHHHhccccCCceeeccCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHHHHHHHHHHHH Q lcl|Aclame:pro 230 RSRSFMKRSRSGGPVVLDDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQISGMYASALNR 309 (392) Q Consensus 230 ~~~~~~~~~~~g~~~vl~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~~~~~~~~l~p 309 (392) ... -.-..|.++-|+++.++.-++..+.-..+....+...+.|+.+=++|..-+|..+....-..... .-.+.| T Consensus 314 ~~~---~~VgPG~iweL~e~ak~~~v~~~~~la~~~~h~~~L~~~l~~vA~~PavA~G~vD~s~~~SG~AL---eL~L~P 387 (527) T protein:vir:10 314 MVP---WTISPLGMVEHGQNNKIYRVNGVASLEPSQTHMTKAEEAMQQTKGIPDIAVGVVDAAVAESGIAL---DLKLSA 387 (527) T ss_pred cCc---cccCCceeEecCCCcceeeccchhhhHHHHHHHHHHHHHHHHhhcCCeeeeccccCCcCcHHHHH---HHHHHH Confidence 000 01124466778999999999987766667777888889999999999999994332221111111 222333 Q ss_pred HHHHHHHH-H---------H-----HHhh-------hh------hcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHH Q lcl|Aclame:pro 310 YLRPAISE-L---------E-----YKLS-------DH------ISVNMRPAIDPLGDNYLSTISTATRWGALAENQATF 361 (392) Q Consensus 310 ~l~~i~~~-l---------~-----~~l~-------~~------~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~ 361 (392) ++...++. + . ..|. .+ +++.+...+..+.....+++.+++++|++++-=|-+ T Consensus 388 Llar~~rk~L~~~~vqrq~~~~~~~~~L~aye~v~~~d~~~~~~v~ivf~p~lP~D~~avie~v~tL~~aGi~S~~tAv~ 467 (527) T protein:vir:10 388 ILSSCAEQELELKSVLKQFFYNLVTQWLPAYEGVGIDDADKKLTVTITFRDPKPVNSEKRFNQLLQLWEAGLIPAKKLTE 467 (527) T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhcccCCCccccceEEEecccCCCCHHHHHHHHHHHHHcCchhHHHHHH Confidence 33222111 1 0 1110 11 122223334456677888999999999999998888 Q ss_pred HHHhCCCC-cc--cc------c---------cccCC----------CCCCCCCCCCCCC Q lcl|Aclame:pro 362 VLQEAGYI-PK--DL------P---------APENT----------NKKTTGQSNEPVP 392 (392) Q Consensus 362 ~l~~~g~~-~~--e~------~---------~~e~~----------~~~~~gd~~~p~p 392 (392) +|...|+. .. |+ + +..+. +.-...|+.+|+| T Consensus 468 ~L~~~~g~eD~E~E~~~I~~era~~a~a~a~A~~~~~a~~~~~~g~~~~~~d~~~~~~~ 526 (527) T protein:vir:10 468 ELSKIMGFELTEEDFKQATEDKKTQGIAQAEAADPFGAQMAAEQGIPDEEDDQALNGQP 526 (527) T ss_pred HHHhccCCCChHHHHHHHHHHHHHHhHHhhhhcCchhhhhccccCCCCCCcccccCCCC Confidence 88777662 21 11 0 11111 1112235577888 No 235 >protein:vir:2198 Length: 536 # NCBI annotation: head-tail connector protein # Family: family:all:481 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_041995;swissprot:sw:p03728;genbank:gi:9627467;goa:P03728;uniprot:P03728;genbank:GeneID:1261033 Probab=51.72 E-value=0.57 Score=21.91 Aligned_cols=336 Identities=12% Similarity=-0.002 Sum_probs=120.0 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhh--------hhhcCC--C-Ccccchhh-------hhcchH----HHH Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIM--------ESLLGD--N-NEWVSARA-------ALRNSD----LFS 58 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--~-~~~v~~~~-------a~~~~~----v~~ 58 (392) ++..+ .+-....... .... .+++..... ..++.. + ...++... ...... ... T Consensus 39 lP~~~-~~~~~~~~~~----~~~~-~dst~~~a~~~Laa~l~~~ltP~~~WFrl~~~d~~~~~~~~~~~~~~~v~~~L~~ 112 (536) T protein:vir:21 39 IPSLF-PKDSDNASTD----YQTP-WQAVGARGLNNLASKLMLALFPMQTWMRLTISEYEAKQLLSDPDGLAKVDEGLSM 112 (536) T ss_pred ccccc-CCCCCccccc----cccc-ccccHHHHHHHHHHHHHHhhcCCCcccccccChhhhhccccchhhHHHHHHHHHH Confidence 33211 1111100000 0000 011110000 000000 0 00000000 000011 112 Q ss_pred HHHHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCce--EEEEEeccccceeee Q lcl|Aclame:pro 59 IILQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGAD--MKWEYLRPSQVNTYY 136 (392) Q Consensus 59 ~i~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~--~~l~~l~~~~v~~~~ 136 (392) |-+++-..+. +-| .+.=+.....+|+.+||+.+++..+..+.+ ...+||..-. +.. T Consensus 113 ve~~~~~~l~----------------~sn----f~~~~~~~~~~L~~~G~a~ly~~e~~~~~~~~f~~~pl~~~~--v~~ 170 (536) T protein:vir:21 113 VERIIMNYIE----------------SNS----YRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMKLYRLSSYV--VQR 170 (536) T ss_pred HHHHHHHHHH----------------hcC----cHHHHHHHHHHHHhHCcEeEEEeeCCCCceeeEEEEEcCeEE--Eee Confidence 2222222222 222 222345567788888999888765443322 3345543221 211 Q ss_pred cCcc-------------------------------------------------ceEEEEEEecCc---ceeeeEEEecee Q lcl|Aclame:pro 137 FEYE-------------------------------------------------NGMYYNITFDDP---KIEPILQAPQSD 164 (392) Q Consensus 137 ~~~~-------------------------------------------------~~~~~~~~~~~~---~~~~~~~~~~~~ 164 (392) +..| ....++...++. .......+.... T Consensus 171 d~~G~vd~i~r~~~~t~~~l~~~fg~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~e~~g~~v~~~~g~~~f~~~P 250 (536) T protein:vir:21 171 DAFGNVLQMVTRDQIAFGALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEDSGEYLRYEEVEGMEVQGSDGTYPKEACP 250 (536) T ss_pred CCCCCeeEEeeeeeccHHHHHHhhhhhhcccccccccccceeEEEEEEEecCCCcEEEEeccCCeeeccccCccccccCC Confidence 1111 111111111100 000111233445 Q ss_pred EEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCcee Q lcl|Aclame:pro 165 LIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPV 244 (392) Q Consensus 165 vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 244 (392) ++..+....+|..||.||..-+...+.....+.+.......-...|...+.- .+....+... .. ..|.++ T Consensus 251 ~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p-~g~~~~~~~~--------~~-~~g~~v 320 (536) T protein:vir:21 251 YIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAIVKMSMISSKVIGLVNP-AGITQPRRLT--------KA-QTGDFV 320 (536) T ss_pred eeeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCc-ccccchhhhc--------cC-CCccee Confidence 5667777777888999999999998888888877777765554544433322 2222111111 11 111111 Q ss_pred -eccCCceEeecccChhhHH-HHHHHHHHHHHHHHHhcccHHHcCCcccccchH-HHHHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 245 -VLDDLEEFTALEIKSNVAQ-LLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSI-QQISGMYASALNRYLRPAISELEYK 321 (392) Q Consensus 245 -vl~~g~~~~~l~~~~~d~~-~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~-~~~~~~~~~~l~p~l~~i~~~l~~~ 321 (392) -..+.....++... .+.+ ..+..+.....|-.+|-+.....-....-|.++ .....-....|.|....+.++|-.- T Consensus 321 ~g~~~~v~~~~~~~~-~~~~~~~~~i~~~~~rI~~af~~~~l~~~~~~r~TAtEV~~r~~E~~~~LG~v~~rl~~Ell~P 399 (536) T protein:vir:21 321 TGRPEDISFLQLEKQ-ADFTVAKAVSDAIEARLSFAFMLNSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLP 399 (536) T ss_pred cCCcccceeeecccc-ccchHHHHHHHHHHHHHHHHHhhhhcccCCCCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHH Confidence 11223334444432 2333 345566677888888865431111111223222 2333445566777777776665432 Q ss_pred hhhh-hcc-cchhhhhcchHHHHHHHHHHHhCCCcCH------HH-HHHHHHhCCCCccccccccCCCCCCCCCCCCC-C Q lcl|Aclame:pro 322 LSDH-ISV-NMRPAIDPLGDNYLSTISTATRWGALAE------NQ-ATFVLQEAGYIPKDLPAPENTNKKTTGQSNEP-V 391 (392) Q Consensus 322 l~~~-~~~-d~~~~~~~~~~~~~~~~~~~~~~g~~T~------nE-~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p-~ 391 (392) |... +.+ .....+..-..+ +++..+.|. ++ +-.++.-.+ .+-.+.|.. .| +. . T Consensus 400 li~r~~~il~r~g~lP~~p~~-------~v~~~~vs~l~~l~r~~~~~~l~~~~~-------~la~~~Pe~-ld--~~id 462 (536) T protein:vir:21 400 LVRVLLKQLQATQQIPELPKE-------AVEPTISTGLEAIGRGQDLDKLERCVT-------AWAALAPMR-DD--PDIN 462 (536) T ss_pred HHHHHHHHHHhCCCCCCCChh-------hccceEEecHHHHHHHHHHHHHHHHHH-------HHHhhchhh-hc--ccCC Confidence 2211 000 000001000000 011111111 11 111110000 011111110 01 11 1 Q ss_pred C Q lcl|Aclame:pro 392 P 392 (392) Q Consensus 392 p 392 (392) + T Consensus 463 ~ 463 (536) T protein:vir:21 463 L 463 (536) T ss_pred H Confidence 2 No 236 >protein:vir:104500 Length: 537 # NCBI annotation: gp20 # Family: family:all:1036 # MgeID: mge:1548 # MgeName: P-SSM4 # Cross-refs: genbank:acc:YP_214665;genbank:gi:61806306;genbank:GeneID:3294555 Probab=51.61 E-value=0.58 Score=21.89 Aligned_cols=384 Identities=10% Similarity=0.088 Sum_probs=154.3 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhh--------hhcCCCCc------cc-chhhhhcchHHHHHHHHHHH Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIME--------SLLGDNNE------WV-SARAALRNSDLFSIILQLSS 65 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~------~v-~~~~a~~~~~v~~~i~~ia~ 65 (392) |.-.+|-|--...+..... . ++.++....+... ...+..+. -| +-+..+.+|.|..||+-|.+ T Consensus 1 ~~~~lfg~~i~~~~~~~~~-~-s~~~~~~~dg~~~~~~~~~~g~~~~~e~~~~~~~eLI~~YR~ma~~pEvd~Av~eIVn 78 (537) T protein:vir:10 1 MAQQLFGFSLQRAKKVPKG-P-SFVQKDSLDGSQPIVGGGYFGYSVDFDGTIRNDHELITRYREMVLNPECDSAVDDVVN 78 (537) T ss_pred CccccccceeecccccccC-C-cccCCCcccccceeecccccccccccccccchHHHHHHHHHHHhhccchhhHHHHhhc Confidence 8888887665443322111 1 2222221111111 11111110 01 22355678999999999999 Q ss_pred hhhhCce-----eee--ccc------------cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccC---CceEE Q lcl|Aclame:pro 66 DLAIVKI-----NAE--KKK------------NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNAN---GADMK 123 (392) Q Consensus 66 ~ia~~p~-----~~~--~~~------------~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~---G~~~~ 123 (392) .+.-+.- .+- ..+ .+.++.--|-...+ ..++.+|...|..|..++-+.+ .-+.+ T Consensus 79 eaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eEF~~Il~ll~F~~~~----~e~fR~WYVDgRi~fhKiid~k~pk~GI~E 154 (537) T protein:vir:10 79 ETICGNFDDVPISIDLHNLKQSEKIKKLIRSEFDEILRLLDFDNRA----YEIFRRWYVDGRLFFHKVIDPKKPRQGLVE 154 (537) T ss_pred ceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHHhccchhh----hHHHhhheeeeEEEEEEEEeCCCcccccee Confidence 8753311 111 000 00111111222233 3456777888999988865432 34899 Q ss_pred EEEeccccceeeecC---c--cce-------EEE----EEEecC----cceeeeEEEeceeEEEec--CCCcccccccCC Q lcl|Aclame:pro 124 WEYLRPSQVNTYYFE---Y--ENG-------MYY----NITFDD----PKIEPILQAPQSDLIHMK--LLSIDGGKTGIS 181 (392) Q Consensus 124 l~~l~~~~v~~~~~~---~--~~~-------~~~----~~~~~~----~~~~~~~~~~~~~vih~~--~~~~~~~~~G~s 181 (392) |..|+|..+..+..- . +.. +.. ++.++. ...+..+.++.+-|.+.. ..+.++ .+.+| T Consensus 155 Lr~lDPr~i~~vR~i~~~~~~~~~~~~~~~~v~~~~~eyf~ynp~g~~~~~~~~vkI~~dAI~y~hSGl~d~n~-~~i~s 233 (537) T protein:vir:10 155 LRYVDPRKIRKVTEYEAKRPEALRTQDLNQQLTQQSASYFLYNPKGLKNSTNQGMKIAPDSIAYCHSGIQDLNK-NMVLS 233 (537) T ss_pred eeeeCCccceeeEeecccCCccceEEecceeeeecccceeeeccccccccCCCceeccHhheeeecccceeCCC-Ceeee Confidence 999999998754331 1 111 100 011110 112233455665444333 223333 34678 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch---HHHHHHHHHHHhcc----------ccCCcee-ec- Q lcl|Aclame:pro 182 PLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS---DKDKASRSRSFMKR----------SRSGGPV-VL- 246 (392) Q Consensus 182 ~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~---~~~~~~~~~~~~~~----------~~~g~~~-vl- 246 (392) -|..+.+.+....-++...--+=-..+.-+=|..++=+.... ++-.+.....+... .+..+.+ .| T Consensus 234 yLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~TGev~ddrk~msMlE 313 (537) T protein:vir:10 234 HLHKAIKAVNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKNKAEQYLREVMGRYRNKLVYDANTGEIKDDKKFMSMLE 313 (537) T ss_pred eehhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhccceEEEeccCceecccchhhhhhh Confidence 888887777666655554433322222223333333222221 12222222222210 1111111 11 Q ss_pred ---------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc--chHH--HHHHHHHHHHHHHHHH Q lcl|Aclame:pro 247 ---------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ--SSIQ--QISGMYASALNRYLRP 313 (392) Q Consensus 247 ---------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~--~~~~--~~~~~~~~~l~p~l~~ 313 (392) ..|.+++.|..... +.-++-.++..+....+++||.+-|...+..+ .+.+ --+-=+..+|.-+-.. T Consensus 314 DyWLPRReGgrgTEItTLpGgqn-lgem~DV~YF~kKLy~aLnVP~SRl~~e~~f~~Gr~~EItRDEiKF~KFI~RLR~r 392 (537) T protein:vir:10 314 DFWLPRREGGRGTEISTLPGGQN-LGELEDVKYFQKKLYKALNVPSSRLETETTFNIGRAAEITRDEVKFQKFIARLRKR 392 (537) T ss_pred hhcccccCCCcccceeeccccCC-cChHHHHHHHHHHHHHHhCCCccccCCCCcccccccchhhHHHHHHHHHHHHHHHH Confidence 23566666654322 23345566778899999999999997543321 1111 1122233444443333 Q ss_pred HHHHHHHHhhhh--------------hcccchhhhhcchH--H------HHHHHHHHHh-----CCCcCHHHHHHHH--- Q lcl|Aclame:pro 314 AISELEYKLSDH--------------ISVNMRPAIDPLGD--N------YLSTISTATR-----WGALAENQATFVL--- 363 (392) Q Consensus 314 i~~~l~~~l~~~--------------~~~d~~~~~~~~~~--~------~~~~~~~~~~-----~g~~T~nE~R~~l--- 363 (392) ....|..-|-+. +.-++...+..|.. + +...++.+-+ +..++.+=+|+.. T Consensus 393 Fs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~s~dyi~k~ILr~ 472 (537) T protein:vir:10 393 FSELFVDLLKTQLILKGICSIEEWEEMKEHIQFDFIADNYFTELKEIEIRNERMNEVAQMDPYVGKYFSANYIRTKVLKQ 472 (537) T ss_pred HHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhhhcccchHHHHHHHhcc Confidence 333333222111 00111111111111 1 1111221111 2223333222211 Q ss_pred ---------------HhCCCC--cccccccc-----CCCCCCCCCCCCC------CC Q lcl|Aclame:pro 364 ---------------QEAGYI--PKDLPAPE-----NTNKKTTGQSNEP------VP 392 (392) Q Consensus 364 ---------------~~~g~~--~~e~~~~e-----~~~~~~~gd~~~p------~p 392 (392) ...|.- |.+.-.++ +.+-.++|.+.+- +| T Consensus 473 tDeeI~~~~k~I~~E~k~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (537) T protein:vir:10 473 TESEIKEIDKEIKQEIADGVIMDPQAMQAMEMGIGDEEPVPEGGEEPQTDPNSAVSP 529 (537) T ss_pred CHHHHHHHHHHHHHHhhCCCCCCcccccccccCCCCcccCCCCCCCcccCCccCCCC Confidence 123432 22211111 1110111111111 11 No 237 >protein:vir:3361 Length: 535 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523332;genbank:gi:17570823;genbank:GeneID:927409 Probab=49.14 E-value=0.65 Score=21.62 Aligned_cols=334 Identities=13% Similarity=0.059 Sum_probs=125.1 Q ss_pred CcchhhHhhcccccccccccccccccccchhhh---------------hhhhcCCCCcccchhhh-----------hcch Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQI---------------MESLLGDNNEWVSARAA-----------LRNS 54 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~v~~~~a-----------~~~~ 54 (392) .+. +|. ....... ...... .+++.... ..||.- .++.... .-.. T Consensus 40 lP~-~~~---~~~~~~~-~~~~~~-~dst~~~a~~~Laa~l~~~ltP~~~WF~l----~~~d~~~~~~~~~~~~~~~v~~ 109 (535) T protein:vir:33 40 IPS-LFP---KESDNES-TDYTTP-WQAVGARGLNNLASKLMLALFPMQSWMKL----TISEYEAKQLVGDPDGLAKVDE 109 (535) T ss_pred ccc-ccC---CCCCccc-cccccc-ccccHHHHHHHHHHHHHHhhcCCCccccc----ccChHHHhccccCcchHHHHHH Confidence 221 111 0000000 000000 01111000 111110 0000000 0001 Q ss_pred HHHHHHHHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCC-ceEEEEEeccccce Q lcl|Aclame:pro 55 DLFSIILQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANG-ADMKWEYLRPSQVN 133 (392) Q Consensus 55 ~v~~~i~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G-~~~~l~~l~~~~v~ 133 (392) ....|-+.+-..+. +-| .+.=+..+..+|+.+||+.+++..+..+ .....+|+..-.|. T Consensus 110 ~l~~ve~~~~~~~~----------------~sn----f~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~f~~~pl~~~~v~ 169 (535) T protein:vir:33 110 GLSMVERIIMNYIE----------------SNS----YRVTLFECLKQLIVAGNALLYLPEPEGSYNPMKLYRLSSYVVQ 169 (535) T ss_pred HHHHHHHHHHHHHH----------------hcC----cHHHHHHHHHHHHhhCceeEEeecCCCCceeeEEEEcCeeEEe Confidence 11222233322222 222 2333456678888899998887654322 22334444221111 Q ss_pred e-----------------------------------------------eecCccceEEEEEEecCcce---eeeEEEece Q lcl|Aclame:pro 134 T-----------------------------------------------YYFEYENGMYYNITFDDPKI---EPILQAPQS 163 (392) Q Consensus 134 ~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 163 (392) . +.++.++....++...+... .....+..- T Consensus 170 ~d~~G~vd~i~r~~~~t~~ql~~~~~~~~~~~~~~k~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (535) T protein:vir:33 170 RDAYGNVLQIVTRDQIAFGALPEDVRSAVEKSGGEKKMDEMVDVYTHVYLDEESGDYLKYEEVEDVEIDGSDATYPTDAM 249 (535) T ss_pred eCCCCCeeEEEeeEeecHHHHHHHhhhhhcccccccccccCCeEEEEEEeeCCCCcEEEEEEEeCccccccccccccccC Confidence 1 01111111111111111110 011123334 Q ss_pred eEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCce Q lcl|Aclame:pro 164 DLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGP 243 (392) Q Consensus 164 ~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 243 (392) .++..+....+|..||.||...+...+.....+.+.......-...|..++..++. ....... .+.. +. T Consensus 250 P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~p~~lv~~~g~-~~~~~~~-------~~~~---g~ 318 (535) T protein:vir:33 250 PYIPVRMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNPAGI-TQPRRLT-------KAQT---GD 318 (535) T ss_pred CceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccc-cchhhcc-------cCCc---ee Confidence 56666776677888999999999999999999988888888888878755433221 1111111 0111 11 Q ss_pred eec--cCCceEeecccChhhHH-HHHHHHHHHHHHHHHhcccHHHcCCcccccchH-HHHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 244 VVL--DDLEEFTALEIKSNVAQ-LLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSI-QQISGMYASALNRYLRPAISELE 319 (392) Q Consensus 244 ~vl--~~g~~~~~l~~~~~d~~-~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~-~~~~~~~~~~l~p~l~~i~~~l~ 319 (392) ++- .++....++...+ +.+ ..+..+..+..|-.+|-+.....-....-|.++ .....-....|.|.+..+.++|- T Consensus 319 ~v~g~~~~v~~~~~~~~~-~~~~~~~~i~~~~~~I~~af~~~~~~~~~~~r~TAtEV~~r~~E~~~~LG~v~~rl~~Ell 397 (535) T protein:vir:33 319 FVPGRREDIDFLQLEKQA-DFTVAKAVSDQIEARLSYAFMLNSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQ 397 (535) T ss_pred eecCCcccceeeeccccc-chhHHHHHHHHHHHHHHHHHhhhhcccCCCccccHHHHHHHHHHHHHHHhHHHHHHHHHHH Confidence 222 2344444444433 333 345566777888888855521111112223222 23344455677777777776654 Q ss_pred HHhhhhh-cc-cchhhhhcchHHHHHHHHHHHhCCCcCH------H-HHHHHHHhCCCCccccccccCCCCCCCCCCCCC Q lcl|Aclame:pro 320 YKLSDHI-SV-NMRPAIDPLGDNYLSTISTATRWGALAE------N-QATFVLQEAGYIPKDLPAPENTNKKTTGQSNEP 390 (392) Q Consensus 320 ~~l~~~~-~~-d~~~~~~~~~~~~~~~~~~~~~~g~~T~------n-E~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p 390 (392) .-|...+ .+ .....+..-..+ +++--+.|+ . ++-.++...+ .+-.+.|. ..|. .- T Consensus 398 ~Pli~r~~~il~r~g~lP~~p~~-------~v~~~yis~La~aqr~~~~~~l~~~~~-------~la~~~P~-~~d~-~i 461 (535) T protein:vir:33 398 LPLVRVLLKQLQATSQIPELPKE-------AVEPTISTGLEAIGRGQDLDKLERCIS-------AWAALAPM-QGDP-DI 461 (535) T ss_pred HHHHHHHHHHHHhcCCCCCCCcc-------ceeEEEecHHHHHHHHHHHHHHHHHHH-------HHHhhChh-hhhc-cC Confidence 3332110 00 000000000000 001111111 1 1111110000 00011110 0000 01 Q ss_pred CC Q lcl|Aclame:pro 391 VP 392 (392) Q Consensus 391 ~p 392 (392) .+ T Consensus 462 d~ 463 (535) T protein:vir:33 462 NL 463 (535) T ss_pred CH Confidence 11 No 238 >protein:vir:10447 Length: 536 # NCBI annotation: head-to-tail joining protein # Family: family:all:481 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848294;genbank:gi:30387485;genbank:GeneID:1733984 Probab=48.48 E-value=0.67 Score=21.54 Aligned_cols=338 Identities=12% Similarity=0.019 Sum_probs=120.2 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhh--------hhhcCC--C-Ccccchhh-------hhcchH----HHH Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIM--------ESLLGD--N-NEWVSARA-------ALRNSD----LFS 58 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--~-~~~v~~~~-------a~~~~~----v~~ 58 (392) ++..+ .+-....... .... .+++..... ..++.. + ...++... ...... .-. T Consensus 39 lP~~~-~~~~~~~~~~----~~~~-~dst~~~a~~~Laa~l~~~ltP~~~WFrl~~~d~~~~~~~~~~~~~~~v~~~L~~ 112 (536) T protein:vir:10 39 IPSLF-PKDSDNASTD----YQTP-WQAVGARGLNNLASKLMLALFPMQTWMRLTISEYEAKQLLSDPDGLAKVDEGLSM 112 (536) T ss_pred ccccc-CCCCCccccc----cccc-ccccHHHHHHHHHHHHHhhhcCCCcccccccChhhhhccccchhhHHHHHHHHHH Confidence 33211 1111110000 0000 011110000 000000 0 00000000 000011 112 Q ss_pred HHHHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCce--EEEEEecccccee-- Q lcl|Aclame:pro 59 IILQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGAD--MKWEYLRPSQVNT-- 134 (392) Q Consensus 59 ~i~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~--~~l~~l~~~~v~~-- 134 (392) |-+++-..+. +-| .+.=+.....+|+.+||+.+++..+..+.+ ...+||..-.|.. T Consensus 113 ve~~~~~~l~----------------~sn----f~~~~~~~~~~L~~~G~a~ly~~e~~~~~~~~~~~~pl~~~~v~~d~ 172 (536) T protein:vir:10 113 VERIIMNYIE----------------SNS----YRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMKLYRLSSYVVQRDA 172 (536) T ss_pred HHHHHHHHHH----------------hcC----cHHHHHHHHHHHHhHCcEeEEEeeCCCCceeeEEEEEcCeEEEeeCC Confidence 2222222222 222 222345567788888999888765443322 3344542221111 Q ss_pred ---------------------------------------------eecCccceEEEEEEecCcce---eeeEEEeceeEE Q lcl|Aclame:pro 135 ---------------------------------------------YYFEYENGMYYNITFDDPKI---EPILQAPQSDLI 166 (392) Q Consensus 135 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~vi 166 (392) .++..+....++...++... .....+..-.++ T Consensus 173 ~G~vd~i~r~~~~t~~~l~~~fg~~~~~~~~~~~~~~~v~v~~~V~~~~~~~~~~~~~e~~g~~v~~~~g~~~f~~~P~i 252 (536) T protein:vir:10 173 FGNVLQMVTRDQIAFGALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEASGEYLRYEEVEGMEVQGSDGTYPKEACPYI 252 (536) T ss_pred CCCeeEEeeeeeccHHHHHHhhhhhhcccccccCcccceEEEEEEEEecCCCcEEEEEeecCccccccccccccccCCce Confidence 01111111111111111100 011123444556 Q ss_pred EecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCcee-e Q lcl|Aclame:pro 167 HMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPV-V 245 (392) Q Consensus 167 h~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-v 245 (392) ..+....+|..||.||...+...+.....+.+.......-...|...+.- .+....+... .. ..|.++ - T Consensus 253 ~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p-~g~~~~~~~~--------~~-~~g~~v~g 322 (536) T protein:vir:10 253 PIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAIVKMSMISSKVIGLVNP-AGITQPRRLT--------KA-QTGDFVTG 322 (536) T ss_pred eeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCc-ccccchhhhc--------cC-CCcceecC Confidence 66777677888999999999998888888877777765555544433322 2222111111 11 111111 1 Q ss_pred ccCCceEeecccChhhHH-HHHHHHHHHHHHHHHhcccHHHcCCcccccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhh Q lcl|Aclame:pro 246 LDDLEEFTALEIKSNVAQ-LLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSI-QQISGMYASALNRYLRPAISELEYKLS 323 (392) Q Consensus 246 l~~g~~~~~l~~~~~d~~-~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~-~~~~~~~~~~l~p~l~~i~~~l~~~l~ 323 (392) ..+.....++... .+.+ ..+..+.....|-.+|-+.....-....-|.++ .....-....|.|....+.++|-.-|. T Consensus 323 ~~~~v~~~~~~~~-~~~~~~~~~i~~~~~rI~~af~~~~l~~~~~~r~TAtEV~~r~~E~~~~LG~v~~rl~~Ell~Pli 401 (536) T protein:vir:10 323 RPEDISFLQLEKQ-ADFTVAKAVSDAIEARLSFAFMLNSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPLV 401 (536) T ss_pred Ccccceeeecccc-ccchHHHHHHHHHHHHHHHHHhhhhcccCCCCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH Confidence 1223334444432 2333 345566677888888865431111111223222 233344556677777777666543222 Q ss_pred hh-hcc-cchhhhhcchHHHHHHHHHHHhCCCcCH------HH-HHHHHHhCCCCccccccccCCCCCCCCCCCCC-CC Q lcl|Aclame:pro 324 DH-ISV-NMRPAIDPLGDNYLSTISTATRWGALAE------NQ-ATFVLQEAGYIPKDLPAPENTNKKTTGQSNEP-VP 392 (392) Q Consensus 324 ~~-~~~-d~~~~~~~~~~~~~~~~~~~~~~g~~T~------nE-~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p-~p 392 (392) .. +.+ .....+..-..+ +++..+.|. ++ +-.++...+ .+-.+.|.. . .+. .+ T Consensus 402 ~r~~~il~r~g~lP~~p~~-------~v~~~~vs~l~~l~r~~~~~~l~~~~~-------~la~~~P~~-l--d~~id~ 463 (536) T protein:vir:10 402 RVLLKQLQATQQIPELPKE-------AVEPTISTGLEAIGRGQDLDKLERCVT-------AWAALAPMR-D--DPDINL 463 (536) T ss_pred HHHHHHHHhCCCCCCCChh-------hccceEEecHHHHHHHHHHHHHHHHHH-------HHHhhchhh-h--cccCCH Confidence 11 000 000001100000 011111111 11 111110000 001111110 0 111 12 No 239 >protein:vir:80165 Length: 651 # NCBI annotation: portal protein # Family: family:all:1548 # MgeID: mge:1878 # MgeName: Pf-WMP3 # Cross-refs: genbank:acc:YP_001285799;genbank:gi:148747833;genbank:GeneID:5220441 Probab=46.11 E-value=0.75 Score=21.28 Aligned_cols=316 Identities=9% Similarity=0.055 Sum_probs=117.3 Q ss_pred CcchhhHhhccccccc-ccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeecccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPP-EVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKN 79 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~ 79 (392) ..-..++++--...+- ....+-.... .+...+..... .|.. ..-....++...+..-...+........ T Consensus 200 ~~v~p~~~~~dp~a~~~~d~~~v~~~~-~t~~~l~~l~~--~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (651) T protein:vir:80 200 EVLDMFDCFYDPNVTDPNRGAFIRKLT-KTKADILNLLS--EGYY-------YGVDPLDVVEHKCKDTSDTKQDMLSTFQ 269 (651) T ss_pred EEecHHHeeecCCCcCccccceeeeee-eeHHHHHHHHh--cccc-------cchhhHHHHhhhccccccCCcccccccc Confidence 3333455444322110 0000000000 00001111000 0000 0111223444444443343333322211 Q ss_pred cccc--ccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeecCccceEEEEEEecCcceeee Q lcl|Aclame:pro 80 QGII--DNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYFEYENGMYYNITFDDPKIEPI 157 (392) Q Consensus 80 ~~~~--~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (392) ..-. ..|+..-.-. ++|.. .+..|...+.+. + ...++.+.. ..... T Consensus 270 ~~d~~~~~~~~~v~v~--------------E~~~~--~d~e~~~~~~~~-------v--~~~g~~il~-~~~~~------ 317 (651) T protein:vir:80 270 GVTTSLWSPHQNVELL--------------EYWGD--IHLENKTYHDVV-------V--TIMGNEVLR-FEQNP------ 317 (651) T ss_pred CCCccccccccceEEE--------------EEEEE--eeccCCceEEEE-------E--EEcCcEEec-ccccC------ Confidence 1110 1111110000 01222 222232221111 1 111111111 00000 Q ss_pred EEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhcc Q lcl|Aclame:pro 158 LQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKR 237 (392) Q Consensus 158 ~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~ 237 (392) ......++|++.....+..||.|++..+.........+.+.......-.+.|..++..++ ....+.. . T Consensus 318 -~~~~~Pf~~~~~~~~~~~~yG~g~~~~~~~~q~~ln~l~~~~ld~~~~~~~~~~~v~~d~-~~~~~~l----~------ 385 (651) T protein:vir:80 318 -YWCGRPFVIGTYIPTARQPYAMGALQPNLGMLHELNIITNQRLDNLELAIDQMYTLRSDG-LLQPEDV----Y------ 385 (651) T ss_pred -CCCCCCeeeecceecCccccCCChHHHHhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCc-cccHHHh----h------ Confidence 011235677777777788899999999998888777777766666555555655543222 2222211 0 Q ss_pred ccCCceeeccCCceEeecccChhhHH-HHHHHHHHHHHHHHHhcccHHHcCCcccc----cchH-HHHHHHHHHHHHHHH Q lcl|Aclame:pro 238 SRSGGPVVLDDLEEFTALEIKSNVAQ-LLSQTDWTSKQYAKVYGLPDSYIGGQGDQ----QSSI-QQISGMYASALNRYL 311 (392) Q Consensus 238 ~~~g~~~vl~~g~~~~~l~~~~~d~~-~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~----~~~~-~~~~~~~~~~l~p~l 311 (392) ...|+++++..+..+.++.....+.+ ...........+-..+||+....|..... |.++ .....-....+.+.+ T Consensus 386 ~~pg~vi~~~~~~~~~~l~~~~~~~~~~~~~l~~l~~~~~~~~gv~~~~~g~~~~~~~~~TAteI~~~~~~~~~~l~~v~ 465 (651) T protein:vir:80 386 TEPGKVFLVSDHGDLQPLANQSSNFSITYQESSFLESTIDKNFGTGNYVGANAARSGERVTAAEVAAVREAGGNRLSGIH 465 (651) T ss_pred cCCCceEEecCCCCceeeccCcccchhHHHHHHHHHHHHHHHhcCChHHhCCCccchhhccHHHHHHHHHHHHHHHHHHH Confidence 13456777776666777654333332 23456666778889999999888753321 2221 222333445566666 Q ss_pred HHHHHHHHHHhhhhhcccchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHh----CC---CCccccccccCCCCCCC Q lcl|Aclame:pro 312 RPAISELEYKLSDHISVNMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQE----AG---YIPKDLPAPENTNKKTT 384 (392) Q Consensus 312 ~~i~~~l~~~l~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~----~g---~~~~e~~~~e~~~~~~~ 384 (392) +.+.+++-.-|+..+ +.-+.+.+- .-+.-++.+. .| ..+.++.. +..-++. T Consensus 466 ~~l~~e~l~pl~~r~------------------l~l~~~~~~--~~~~~ri~~~~~~~~~~~~i~~~dl~~--~~~iv~~ 523 (651) T protein:vir:80 466 KHIEETSLLVLLEKV------------------MHLVQQFTD--QPGMVRVAGDEAGAYEYYELDVEDLQK--EVRLVPI 523 (651) T ss_pred HHHHHHHHHHHHHHH------------------HHHHHHhcC--cccceeecccccccccccccCccceee--eeeeeec Confidence 666555433332211 011111100 0000000000 00 00111100 0000000 Q ss_pred CCCC---------CCCC Q lcl|Aclame:pro 385 GQSN---------EPVP 392 (392) Q Consensus 385 gd~~---------~p~p 392 (392) |... +-.- T Consensus 524 g~~~~~~r~~~~~~l~~ 540 (651) T protein:vir:80 524 GSDHVIERKQYIEDRLT 540 (651) T ss_pred cHHHHHHHHHHHHHHHH Confidence 0000 0000 No 240 >protein:vir:5665 Length: 511 # NCBI annotation: portal vertex protein of head # Family: family:all:1036 # MgeID: mge:119 # MgeName: KVP40 # Cross-refs: genbank:acc:NP_899604;genbank:gi:34419591;genbank:GeneID:2546036 Probab=44.78 E-value=0.79 Score=21.13 Aligned_cols=383 Identities=8% Similarity=0.042 Sum_probs=154.0 Q ss_pred chhhHhhcccc-cccccccccccccccchhhh----------------hhhhcCCCCc-----cc-chhhhhcchHHHHH Q lcl|Aclame:pro 3 LPILNFINQTN-DPPEVGSVQSYFPDGNDAQI----------------MESLLGDNNE-----WV-SARAALRNSDLFSI 59 (392) Q Consensus 3 Mg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~-----~v-~~~~a~~~~~v~~~ 59 (392) |.||...-... +........++.++..+.+. ........+. -| +-+..+.+|.|..| T Consensus 1 ~~~w~~~de~~~~~~~~~~~~S~~~p~~~DGa~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~eLI~~YR~ma~~pEvd~A 80 (511) T protein:vir:56 1 MKFWTKEEEQDIQKIEKNPVRSFSAPDNVDGAKEIHTNLLAPQLGHAIIPSDAQSEGTIPVKELIKSYRALAEYHEVDDA 80 (511) T ss_pred CCCccchhhhhhhhhccCCcccccCCCCCCCceEEecccccceecceeccccccccCccchHHHHHHHHHHhhccchhhH Confidence 44443221111 01111111122222222111 0111111110 11 12355678999999 Q ss_pred HHHHHHhhhhCc-----eeeecccc--------------ccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCc Q lcl|Aclame:pro 60 ILQLSSDLAIVK-----INAEKKKN--------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGA 120 (392) Q Consensus 60 i~~ia~~ia~~p-----~~~~~~~~--------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~ 120 (392) |+.|.+.+.-+. +.+-=... +.++.--|-...+ ..++.+|...|..|..++-+.+.- T Consensus 81 v~eIvne~iv~d~~~~pV~l~ld~~~~s~~iK~kI~eeF~~Il~ll~F~~~~----~~~fR~WYVDgRi~fHkiid~k~G 156 (511) T protein:vir:56 81 IQEIVDEAIVYENDKEVVWLNLDNTDFSENIKAKINEEFDRVVSLLQMRKHG----YKWFRKWYVDSRIYFHKILDKDNN 156 (511) T ss_pred HHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHHhccchhh----hHHHhhhhhcceEEEEEEeccccc Confidence 999999875331 11110000 0011111222233 345677788999998887666656 Q ss_pred eEEEEEeccccceeeecC-----cc------ceEEEEEEecC-c---------ceeeeEEEeceeEEEecCCCc---ccc Q lcl|Aclame:pro 121 DMKWEYLRPSQVNTYYFE-----YE------NGMYYNITFDD-P---------KIEPILQAPQSDLIHMKLLSI---DGG 176 (392) Q Consensus 121 ~~~l~~l~~~~v~~~~~~-----~~------~~~~~~~~~~~-~---------~~~~~~~~~~~~vih~~~~~~---~~~ 176 (392) +.+|..|+|..+..+..- ++ ..-++.|...+ . .....+.++.+.|.|...--. ... T Consensus 157 I~eLr~lDPr~i~~vr~i~~~~~~~~~v~~~~~ey~~Y~~~~~~~~~~~~~~~~~~~~vkI~~daI~y~hSGL~d~~~~~ 236 (511) T protein:vir:56 157 IIELRPLNPMKMELVREIQKETIDGVEVVKGTLEYYVYKQSDYKMPSWMSATNRAQTSFRIPKDAIVFAHSGLMRGCADD 236 (511) T ss_pred eeehhhcCcccchhhhhhhcccccccccccceeeeeEecCCCcccCcccccccccccceeechhheeeecccceeccCCC Confidence 899999999988764321 11 11122221111 0 012447788888866643211 122 Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch---HHHHHHHHHHHhc----------cccCCce Q lcl|Aclame:pro 177 KTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS---DKDKASRSRSFMK----------RSRSGGP 243 (392) Q Consensus 177 ~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~---~~~~~~~~~~~~~----------~~~~g~~ 243 (392) .+.+|-|..+.+.+....-++...--+=-..+.-+=|..++=+.... ++-.+.....+.. ..+..+. T Consensus 237 g~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYl~~iM~k~kNklVYDa~TGev~ddrk~ 316 (511) T protein:vir:56 237 PYIIGYLDRAIKPANQLKMLEDALVIYRLARAPERRVFYVDVGNLPTQKAQQYVNGIMQNVKNRVVYDTQTGQVKNTTNA 316 (511) T ss_pred CeeeccchhhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCceeccchhh Confidence 34678888887777666655554433322222223333333222221 1112222222211 1111111 Q ss_pred e-ec----------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccc--ccc---hHH--HHHHHHHH Q lcl|Aclame:pro 244 V-VL----------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGD--QQS---SIQ--QISGMYAS 305 (392) Q Consensus 244 ~-vl----------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~--~~~---~~~--~~~~~~~~ 305 (392) + .| +.|.+++.|..... +.-++-.++..+....+++||.+-|+..+. +-+ +.+ --+-=+.. T Consensus 317 msMlEDyWLpRReGgrgTEItTLpGgqn-lgem~DV~YF~kKLy~aLnVP~SRl~~e~q~~~f~~Gr~~EItRDEiKF~K 395 (511) T protein:vir:56 317 MSMLEDYYLPRREGSKGTEVSTLPGGQS-LGDIEDVLYFNRKLYKAMRIPTSRAASEDQTGGINFGQGAEITRDELKFTK 395 (511) T ss_pred hhhHhhhcccccCCCCccceeeccccCC-cChHHHHHHHHHHHHHHhCCCcccccCCCCccccccccchhhhHHHHHHHH Confidence 1 11 23566666654322 233455667788999999999999974321 111 111 11222334 Q ss_pred HHHHHHHHHHHHHHHHhhhh--------------hcccchhhhhcchH--HH------HHHHHHHHh-----CCCcCHHH Q lcl|Aclame:pro 306 ALNRYLRPAISELEYKLSDH--------------ISVNMRPAIDPLGD--NY------LSTISTATR-----WGALAENQ 358 (392) Q Consensus 306 ~l~p~l~~i~~~l~~~l~~~--------------~~~d~~~~~~~~~~--~~------~~~~~~~~~-----~g~~T~nE 358 (392) +|.-+-......|..-|-.. +.-++...+..|.. ++ ...++.+-+ +..++.+= T Consensus 396 FI~RLR~rFs~lF~~~Lk~qLilKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyvGky~S~~y 475 (511) T protein:vir:56 396 FVKRLQTKFETVITDPLKHQLIVNNIITEEEWDANHEKLYVVFNQDSYFEEAKELEILNSRMNAMRDIQDYAGKYYSHKY 475 (511) T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhcchhccccchHH Confidence 44443333333333222111 11111111111111 11 112222211 33445554 Q ss_pred HHHHHHhCCCCccccccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 359 ATFVLQEAGYIPKDLPAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 359 ~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p~p 392 (392) +++...+ +...|+-..+..-..+..+.--+.| T Consensus 476 i~k~ILr--~tDeei~~~~k~I~~E~k~~~~~~~ 507 (511) T protein:vir:56 476 IQKNILR--LSDDQITAMQSEIDEEETNPRFQQD 507 (511) T ss_pred HHHHHhc--cCHHHHHHHHHHHHHhhcCCCCCCc Confidence 5433211 1111111100000000001111111 No 241 >protein:vir:98265 Length: 524 # NCBI annotation: gp20 portal vertex of the head # Family: family:all:1036 # MgeID: mge:1667 # MgeName: RB43 # Cross-refs: genbank:acc:YP_239198;genbank:gi:66391673;genbank:GeneID:3416367 Probab=32.84 E-value=1.4 Score=19.79 Aligned_cols=381 Identities=8% Similarity=0.070 Sum_probs=152.0 Q ss_pred Ccc-hhhHhhccccc----------ccccccccccccccchhhh-----------hhhh-----cCCCCc------cc-c Q lcl|Aclame:pro 1 MIL-PILNFINQTND----------PPEVGSVQSYFPDGNDAQI-----------MESL-----LGDNNE------WV-S 46 (392) Q Consensus 1 m~M-g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-----------~~~~-----~~~~~~------~v-~ 46 (392) |-| ||||.++-... ........++.++..+.+. ...+ .+..+. -| . T Consensus 1 ~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~~s~~~p~~~dGa~~i~~~~~~~~~~g~~~~~y~~~e~~~~~~~eLI~~ 80 (524) T protein:vir:98 1 MNFLGFGNVLSFFKNFAREDEIELEQQLKNDTGSVAPPKNNDGAYEIETDLNNQKYAGVFQQFYSGQDPAIQNKEQLINT 80 (524) T ss_pred CCCcchhhHHHHhhhhhhhhhhhHhhhhcCCcccccCCCCCCCceeecCCCCcceecceeeeeccccccccchHHHHHHH Confidence 665 67663221110 0011111122222221111 1111 111110 01 1 Q ss_pred hhhhhcchHHHHHHHHHHHhhhhC-----ceeeeccc--------------cccccccCCccCCHHHHHHHHHHHHHHhC Q lcl|Aclame:pro 47 ARAALRNSDLFSIILQLSSDLAIV-----KINAEKKK--------------NQGIIDNPSTNANKHGFWQSMFAQLLLGG 107 (392) Q Consensus 47 ~~~a~~~~~v~~~i~~ia~~ia~~-----p~~~~~~~--------------~~~~~~~PN~~~s~~~f~~~~~~~l~l~G 107 (392) -+..+.+|.|..||+.|.+.+.-+ |+.+-=.. .+.++.--|-...+ ..++.+|...| T Consensus 81 YR~ma~~pEvd~Av~eIVneaIv~~~~~~pV~l~L~~~~~s~~iK~kI~eeF~~Il~ll~F~~~~----~~~fR~WYVDg 156 (524) T protein:vir:98 81 YRGIMSYPEVENAVSEIIDDAIVNEQGKDIITMDLAKTNFSKAIQDKIVEEFDNVLNIYDFDNMG----ARLFRDWYVDS 156 (524) T ss_pred HHHHhhccchhhHHHhhhcceeEecCCCceEEEEecccccchHHHHHHHHHHHHHHHHhccchhh----hHHHhhhhhcc Confidence 234467899999999999987422 11111000 00111111222233 34567788899 Q ss_pred CeeEEEeeccCCc--eEEEEEeccccceeee-----cCccc-eE------EEEEEe-------cC--cceeeeEEEecee Q lcl|Aclame:pro 108 EAFAYRWRNANGA--DMKWEYLRPSQVNTYY-----FEYEN-GM------YYNITF-------DD--PKIEPILQAPQSD 164 (392) Q Consensus 108 n~~~~i~r~~~G~--~~~l~~l~~~~v~~~~-----~~~~~-~~------~~~~~~-------~~--~~~~~~~~~~~~~ 164 (392) ..|..++-+.+.. +.+|..|+|..+..+. ..+++ .+ ++.|.. .. ...+..+.++.+. T Consensus 157 Ri~fhkiid~~~~kGI~ELr~lDPr~i~~vr~~~~~~~~~~~~v~~~~~e~f~Y~~~~~~~~~~g~~~~~~~~ikI~~dA 236 (524) T protein:vir:98 157 RIYFHKIMHKDESKGIRELRQLDPRCMELIRESITETLDGGVKVFRGYREFFVYSAPKAGYTYNGQIYQANQKIKIPRSA 236 (524) T ss_pred eeEEEEEEcCCCCcceeeeeeeCCccceeeeeccccccccchhhccceeeeeeeccCCCccccccceecCCCceeechhh Confidence 9999988554332 8999999999996543 11111 11 111210 00 0112346788888 Q ss_pred EEEecCC--CcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch---HHHHHHHHHHHhc--- Q lcl|Aclame:pro 165 LIHMKLL--SIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS---DKDKASRSRSFMK--- 236 (392) Q Consensus 165 vih~~~~--~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~---~~~~~~~~~~~~~--- 236 (392) |.|.... +..+.. +|-|..+.+.+....-++...--+=-..+.-+=|..++=+.... ++-.+.....+.. T Consensus 237 Ivy~hSGL~d~~~~i--isyLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlPk~KAeqYl~~im~k~kNklv 314 (524) T protein:vir:98 237 IVYAHSGLEDCSNNI--IGYLHRAVKPANQLRLLEDAMVIYRITRAPERRVFYIDVGQMGGNKATQYVNNIAQGLKNRVV 314 (524) T ss_pred eeeeccCcccCCCCe--eeehhHhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeE Confidence 8887532 222221 46666666666555555444333322222223333333222222 2222333333321 Q ss_pred -------cccCCcee-ec----------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc----c Q lcl|Aclame:pro 237 -------RSRSGGPV-VL----------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ----S 294 (392) Q Consensus 237 -------~~~~g~~~-vl----------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~----~ 294 (392) ..+..+.+ .| +.|.+++.|..... +.-++-.++..+....+++||.+-|.....+. + T Consensus 315 YDa~TGevrddrk~msMlEDyWLpRReGgrgTEItTLpggqn-lgem~DV~YF~kkLy~aLnVP~sRl~~~~~~f~~Gr~ 393 (524) T protein:vir:98 315 YDARTGTVKNQQNNLSMTEDYWLMRRDGKAITEVSTLPGGQN-FSDMDDIKWFNRKLYEALRVPLSRMPRDDGGMQIGGG 393 (524) T ss_pred eeccCceeeccccccchhhhhcccccCCCCccceeeccccCC-cChHHHHHHHHHHHHHHhCCCceeccCCCCccccccc Confidence 11111211 11 23666666654322 22345566778899999999999996432211 1 Q ss_pred hH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----h---------cccchhhhhcch--HHH------HHHHHHHHh- Q lcl|Aclame:pro 295 SI-QQISGMYASALNRYLRPAISELEYKLSDH-----I---------SVNMRPAIDPLG--DNY------LSTISTATR- 350 (392) Q Consensus 295 ~~-~~~~~~~~~~l~p~l~~i~~~l~~~l~~~-----~---------~~d~~~~~~~~~--~~~------~~~~~~~~~- 350 (392) ++ .--+-=+..+|.-+-......|..-|-+. + .-++...+..|. .++ ...++.+-+ T Consensus 394 ~EItRDEiKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~ 473 (524) T protein:vir:98 394 GEITRDELKFSKFIRTLQIQFSPVLSDPLKTNLIAKKIITEDEWEENVSKISFVFQQDSYYAEVKDIEILERRLNLMSQV 473 (524) T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHhhcceEEEeecchHHHHHHHHHHHHHHHHHHHh Confidence 11 11122233444443333333333222111 0 000111111111 111 112222211 Q ss_pred ----CCCcCHHHHHHHHHhCCCCcccccc----c-----cCCCCCCCCCCCCC Q lcl|Aclame:pro 351 ----WGALAENQATFVLQEAGYIPKDLPA----P-----ENTNKKTTGQSNEP 390 (392) Q Consensus 351 ----~g~~T~nE~R~~l~~~g~~~~e~~~----~-----e~~~~~~~gd~~~p 390 (392) +..++.+=+|+...+ +...|+-. + ++.-+-+..+.++- T Consensus 474 dpyvGky~s~dyi~k~ILr--~tDeei~~~~k~I~~E~k~~~~~~p~~e~~~f 524 (524) T protein:vir:98 474 EGVVGKYVSHKYIMKEILR--MSDEDIDEQAKLIEEESKEERFKNPEAEEENF 524 (524) T ss_pred ccccccccchHHHHHHHhc--cCHHHHHHHHHHHHHHHhCCCCcCCccccccC Confidence 334444444332211 11111100 0 01111111111111 No 242 >protein:vir:1785 Length: 555 # NCBI annotation: head-tail connector protein # Family: family:all:481 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570351;genbank:gi:18640510;genbank:GeneID:932723 Probab=32.07 E-value=1.5 Score=19.70 Aligned_cols=323 Identities=11% Similarity=0.060 Sum_probs=119.2 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhh--------hhhcCCC----Ccccchhhh---hcchHH--------H Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIM--------ESLLGDN----NEWVSARAA---LRNSDL--------F 57 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~----~~~v~~~~a---~~~~~v--------~ 57 (392) +++ ++.+-.... .. ..... .+++..... ..++..+ ...++.... -..+.+ . T Consensus 31 lP~-~~~~~~~~~---~~-~~~~~-~dst~~~a~~~Laa~l~~~ltpp~~~WF~l~~~d~~~~~~~~~~~~~~~v~~~l~ 104 (555) T protein:vir:17 31 LPY-ILTDEGHVQ---GG-YLPTP-WQSVGSKGVNVLASKLMLSLFPVNTSFFKLQINDAEIDNLGMDEQARSEIDLSLS 104 (555) T ss_pred ccc-ccCCCCCcc---cc-ccccc-ccccHHHHHHHHHHHHHHhhcCCCCcccccccCHHHHhhccCCHHHHHHHHHHHH Confidence 432 111111111 00 00011 111111111 1111100 001111100 001111 1 Q ss_pred HHHHHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCCceEEEEEeccccceeeec Q lcl|Aclame:pro 58 SIILQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANGADMKWEYLRPSQVNTYYF 137 (392) Q Consensus 58 ~~i~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G~~~~l~~l~~~~v~~~~~ 137 (392) .|-+++-..+.. -| .+.=+..+..+|+.+||+.+++..+ +...|||.. +-+..+ T Consensus 105 ~ve~~~~~~l~~----------------sn----f~~~~~~~~~~L~~~G~a~ly~~~~----~~~~~pl~~--y~v~~d 158 (555) T protein:vir:17 105 RIERIVTQDIAE----------------SS----DRVHLEMAMKHLIVTGNALLYQGKK----NLKLYPLDR--FVVSRD 158 (555) T ss_pred HHHHHHHHHHHh----------------cC----cHHHHHHHHHHHHhHCeEEEEecCC----ceeEEEcCe--EEEeeC Confidence 133333333321 12 2222445566777788887665322 123333321 111111 Q ss_pred Cccc--------------------------------------------------------------------eEEEEEEe Q lcl|Aclame:pro 138 EYEN--------------------------------------------------------------------GMYYNITF 149 (392) Q Consensus 138 ~~~~--------------------------------------------------------------------~~~~~~~~ 149 (392) ..|+ ..+++... T Consensus 159 ~~G~vd~v~rk~~~t~~ql~~~fg~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~v~t~~~~~~~~~~~~~e~ 238 (555) T protein:vir:17 159 GEGNVMEIVTEEQIDRSLLPEEFQKVGGLEGAPDSNAVGEDGPKMGVTAPGGRDKGKSNDALVYTYVCRKDGQVKWHQEC 238 (555) T ss_pred CCcCeeEEEeeeeecHHHHHHHhhhccccchhhhhhhccccchhhhhhhhcccccCCCcceeEeecccccCCeeEEEEec Confidence 1111 11111111 Q ss_pred cCcce-e--eeEEEeceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHH Q lcl|Aclame:pro 150 DDPKI-E--PILQAPQSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKD 226 (392) Q Consensus 150 ~~~~~-~--~~~~~~~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~ 226 (392) ++... + ....+..-.++..+....+|..||.||...+...+.....+.+.......-...|..++..++... .... T Consensus 239 ~~~~v~~~l~e~g~~e~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~pp~lv~~~g~~~-~~~l 317 (555) T protein:vir:17 239 DGKVIPGSNSSAPYTHNPWIPLRFNIVDGEAYGRGRVEEFMGDLKSLEALSQAMVEGSAASAKVVFMVSPSATTK-PQNL 317 (555) T ss_pred CceeccccccccCcccCCeeeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeccccccC-ccee Confidence 11000 0 011233345567777777888899999999999999999999888888888887876654332211 1111 Q ss_pred HHHHHHHHhccccCCceeeccCCceEeeccc-ChhhHHH-HHHHHHHHHHHHHHhcccHHHcCCcccc--cchH-HHHHH Q lcl|Aclame:pro 227 KASRSRSFMKRSRSGGPVVLDDLEEFTALEI-KSNVAQL-LSQTDWTSKQYAKVYGLPDSYIGGQGDQ--QSSI-QQISG 301 (392) Q Consensus 227 ~~~~~~~~~~~~~~g~~~vl~~g~~~~~l~~-~~~d~~~-~e~~~~~~~~Ia~~fgVP~~~lg~~~~~--~~~~-~~~~~ 301 (392) . ....+.++.+..-.+.++.. ++.+.+. .+..+..+..|-.+|-+ ++..+.. |.++ ..... T Consensus 318 ~----------~~~~g~v~~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~~I~~aFm~----~~~~d~~r~TAtEV~~r~~ 383 (555) T protein:vir:17 318 A----------LAANGAIIQGRPDDVSVVQANKAADFRTVLEMIQKLEQRISDAFLM----LQVRQSERTTATEVQATVQ 383 (555) T ss_pred e----------cCCCceeecCCcccceeeeccccchhhHHHHHHHHHHHHHHHHHhh----cCCCCcccchHHHHHHHHH Confidence 0 01112223222223334332 2344442 33445556677777754 2222222 2222 12334 Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh-hcc-cchhhhhcchHHHHHHHHHHHhCCCcCHHHH------HHHHHhCCCCcccc Q lcl|Aclame:pro 302 MYASALNRYLRPAISELEYKLSDH-ISV-NMRPAIDPLGDNYLSTISTATRWGALAENQA------TFVLQEAGYIPKDL 373 (392) Q Consensus 302 ~~~~~l~p~l~~i~~~l~~~l~~~-~~~-d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~------R~~l~~~g~~~~e~ 373 (392) -....|.|.+..+.++|-.-|... +.+ .....+..-.. .+++..+.+.-++ .+.+ + T Consensus 384 E~~~~LGpv~~rl~~E~L~Pli~R~~~il~r~g~lP~~p~-------~~v~~~i~~~l~~l~r~~~~~~l---------~ 447 (555) T protein:vir:17 384 ELNEQIGGIYSNLTTELLQPYLARKLHLLQKQRKLPQLPK-------DLVQPTVVAGLWGVGRGQDKQQL---------M 447 (555) T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCH-------hhhccceeehHHHHHHHHHHHHH---------H Confidence 455677777777766653322111 000 00000000000 0111222221111 0000 0 Q ss_pred ccccCCCCCCCCCCCCCCC Q lcl|Aclame:pro 374 PAPENTNKKTTGQSNEPVP 392 (392) Q Consensus 374 ~~~e~~~~~~~gd~~~p~p 392 (392) ..+..+. +-. ++| T Consensus 448 ~~~~~la-----q~~-~~p 460 (555) T protein:vir:17 448 EFITTLA-----QTM-GPE 460 (555) T ss_pred HHHHHHH-----hhc-Cch Confidence 0011111 111 125 No 243 >protein:vir:106999 Length: 564 # NCBI annotation: portal vertex protein gp20 # Family: family:all:1036 # MgeID: mge:1459 # MgeName: S-PM2 # Cross-refs: genbank:acc:YP_195138;genbank:gi:58532915;interpro:IPR010823;uniprot:Q5GQN4;genbank:GeneID:3260496 Probab=30.77 E-value=1.5 Score=19.54 Aligned_cols=380 Identities=11% Similarity=0.114 Sum_probs=148.6 Q ss_pred c-hhhHhhcccccccccccccccccccchhhhhhhhcCC-------CCc--------cc-chhhhhcchHHHHHHHHHHH Q lcl|Aclame:pro 3 L-PILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGD-------NNE--------WV-SARAALRNSDLFSIILQLSS 65 (392) Q Consensus 3 M-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--------~v-~~~~a~~~~~v~~~i~~ia~ 65 (392) | .+|-|........+.. ++.++..+.++-....+. .|. -| .-+..+.+|.|..||+.|.+ T Consensus 1 m~~lfgf~i~~~~~~~~~---S~vpp~~~~~~~~i~~g~~g~~v~~~g~~~~~n~~eLI~~YR~ma~~pEVd~Av~eIVn 77 (564) T protein:vir:10 1 MSQLFGFLINEKEGQKGQ---SPVPPNDEASVSTVAGGYFGTYVDTSGGQNSRNEYELIRRYRDMSLHPEVDSAIDEIVN 77 (564) T ss_pred CcchhcceeeeeccCCCC---CcccCCcCCChhhhhccccceeeecccccchhhHHHHHHHHHHHhhccchhhHHHHhhc Confidence 5 4565554433332222 222222222211111111 110 01 12344678999999999999 Q ss_pred hhhhC-----ceeee--ccc------------cccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeec----cCCceE Q lcl|Aclame:pro 66 DLAIV-----KINAE--KKK------------NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRN----ANGADM 122 (392) Q Consensus 66 ~ia~~-----p~~~~--~~~------------~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~----~~G~~~ 122 (392) .+.-+ |+.+- ..+ .+.++.--|-...+ ..++.+|...|..|..++-+ ..| +. T Consensus 78 eaIv~d~~~~pV~vdL~~~~~s~siK~kI~eEF~~Il~ll~F~~~~----~e~fR~WYVDgRi~fHkiid~~~pk~G-I~ 152 (564) T protein:vir:10 78 EFVVNDGDDKPVEVDLQNLEIGSGVKKKIRDEFNRILRMMNFNVNA----HEIIRNWYVDGRSHYHKVIDLDNPKKG-IL 152 (564) T ss_pred ceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHHhccchhh----hHHHhhhhhcceEEEEEEeeCCChhhh-hh Confidence 86422 11110 000 00111112222233 34567778899999887543 235 88 Q ss_pred EEEEeccccceeeecCc------cce---------------EEEEEEecCcc-------------eeeeEEEeceeEEEe Q lcl|Aclame:pro 123 KWEYLRPSQVNTYYFEY------ENG---------------MYYNITFDDPK-------------IEPILQAPQSDLIHM 168 (392) Q Consensus 123 ~l~~l~~~~v~~~~~~~------~~~---------------~~~~~~~~~~~-------------~~~~~~~~~~~vih~ 168 (392) +|..|+|..++.+...- +.. -++.|...... .+..+.++.+.|.|. T Consensus 153 eLr~lDPr~i~~vr~i~~~~~~~~~~v~k~~~~~~~y~~~~Eyy~Ynp~~~~g~~~~~~~~~~~~~~~~ikI~~daI~y~ 232 (564) T protein:vir:10 153 ELRYIDSLKIRKVRQKLKDVDPNRKEIEKGTALQYDYGDFIEYYIYNPKGFAGNIPMVTGSMDWSNQEGIKIASDAIAQS 232 (564) T ss_pred hhhhhcccceeeeeeeccccccccceeeeeeeeeccccccccceeeccccccCcccccccccccccccceeechhhccee Confidence 99999999777654111 111 11111111100 112356677777666 Q ss_pred cC--CCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch---HHHHHHHHHHHhc------- Q lcl|Aclame:pro 169 KL--LSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS---DKDKASRSRSFMK------- 236 (392) Q Consensus 169 ~~--~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~---~~~~~~~~~~~~~------- 236 (392) .. .+.++.. =+|-|..+.+.+....-++...--+=-..+.-+=|..++=+.... ++-.+.....+.. T Consensus 233 hSGL~d~~~~~-i~gyLhkAIKp~NQLkmlEDAlVIYRitRAPeRRvFYIDVGnLPk~KAeqYlr~iM~k~KNklVYDa~ 311 (564) T protein:vir:10 233 TSGLMDLNKKM-TLSFLHKAIKSLNQLRMIEDSLVIYRLSRAPERRIFYIDVGNLPKVKAEQYLRDVMSRYRNKLVYDGQ 311 (564) T ss_pred cccceeCCCCc-eeccchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEecc Confidence 43 2223322 356666666665555544444333222222222233333222221 1112222222221 Q ss_pred ---cccCCcee-ec----------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc----chH-H Q lcl|Aclame:pro 237 ---RSRSGGPV-VL----------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ----SSI-Q 297 (392) Q Consensus 237 ---~~~~g~~~-vl----------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~----~~~-~ 297 (392) ..+..+.+ .| ..|.+++.|.... .+.=++-.++..+....+++||.+-|...+.+. +++ . T Consensus 312 TGevrddrk~msMlEDyWLPRReGgrgTEItTLpGgq-nLgem~DV~YF~kKLY~aLnVP~SRl~~e~~~f~~Gr~~EIt 390 (564) T protein:vir:10 312 TGEIRDDKKHMSMLEDFWLPRREGGRGTEITTLPGGQ-NLGELKDVEYFKKKLYNSLNLPPSRLTDDNKAFNLGKSTEIL 390 (564) T ss_pred CceecccchhhhhHhhhcccccCCCcccceeeccccC-CcchHHHHHHHHHHHHHHhCCCcccccCCCceeecccccchh Confidence 01111111 11 2356666665433 222244566777899999999999997543211 111 1 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhh--------------hcccchhhhhcchH--H------HHHHHHHHHh----- Q lcl|Aclame:pro 298 QISGMYASALNRYLRPAISELEYKLSDH--------------ISVNMRPAIDPLGD--N------YLSTISTATR----- 350 (392) Q Consensus 298 ~~~~~~~~~l~p~l~~i~~~l~~~l~~~--------------~~~d~~~~~~~~~~--~------~~~~~~~~~~----- 350 (392) --+-=+..+|.-+-......|..-|-+. +.-++...+..|.. + +...++.+-+ T Consensus 391 RDEiKF~KFI~RLR~rFs~lF~~~Lk~qLiLKgiit~eeW~~i~~~I~~~f~~Dn~f~ElKe~Eil~~Rl~~l~~~dpyv 470 (564) T protein:vir:10 391 RDELKFTKFIGRLRKRFAQLFHDILKTQLILKGIITPEDWDDMEEHIQYDFLFDNHFNELKEQEMQLQRVNLATQMDPFV 470 (564) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhhhhh Confidence 1122233444443333333333222111 00011111111110 1 1111111111 Q ss_pred CCCcCHH------------HHHHHH------HhCCC--CccccccccCC-------CCC-------------CC--CCCC Q lcl|Aclame:pro 351 WGALAEN------------QATFVL------QEAGY--IPKDLPAPENT-------NKK-------------TT--GQSN 388 (392) Q Consensus 351 ~g~~T~n------------E~R~~l------~~~g~--~~~e~~~~e~~-------~~~-------------~~--gd~~ 388 (392) +..++.+ |+-++. .+.|. .|.+.-.++++ +|. .. +.+. T Consensus 471 Gky~S~dyi~k~ILr~tDeei~~~~kqI~~E~k~~~~~~P~e~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~a~ 550 (564) T protein:vir:10 471 GKYFSTEYIRRKILMQTENEFKEIDKQMKSDIESGLAIDPIQVNMLDDMEKQNQAFAPELQAAQDDLAAEREIKKLNSAP 550 (564) T ss_pred ccccchHHHHHHHhccCHHHHHHHHHHHHHHhhcCCCCCchhhhcCCCccCCCCcCCcchhhhccccccccChhhhccCC Confidence 2222222 222111 12332 23221111111 111 11 2222 Q ss_pred CCCC Q lcl|Aclame:pro 389 EPVP 392 (392) Q Consensus 389 ~p~p 392 (392) +|+| T Consensus 551 ~~~~ 554 (564) T protein:vir:10 551 KPPP 554 (564) T ss_pred CCCC Confidence 3333 No 244 >protein:vir:108049 Length: 524 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:2002 # MgeName: JS98 # Cross-refs: genbank:acc:YP_001595296;genbank:gi:161622602;genbank:GeneID:5783768 Probab=29.06 E-value=1.7 Score=19.33 Aligned_cols=382 Identities=10% Similarity=0.076 Sum_probs=149.4 Q ss_pred Cc-----chhhHhhcccccc----cccccccccccccchhhh-----------hhhh----c-CCCCc------cc-chh Q lcl|Aclame:pro 1 MI-----LPILNFINQTNDP----PEVGSVQSYFPDGNDAQI-----------MESL----L-GDNNE------WV-SAR 48 (392) Q Consensus 1 m~-----Mg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-----------~~~~----~-~~~~~------~v-~~~ 48 (392) |. +.+|.|..+..+. .-.....++.++..+.+. ...+ . +..+. -| .-+ T Consensus 1 ~~~~~~~~~lf~f~~~~de~~~~~~~~~~~~S~~~p~~~dGa~~I~~~~~~~~~~~~~q~~y~~~e~~~~~~~eLI~~YR 80 (524) T protein:vir:10 1 MANFNTILSFLKPWANEDEKEYKQQINNNLESVTAPKLDDGAREIETQEQNIPYNALMQQMFGSNEPEVKNTRELIDTYR 80 (524) T ss_pred CCchhhHHHHhhhhhcchhhhhhhhhccCCCccccCCCCCCceeeccCcccccchhhhhhhhhcccchhhhHHHHHHHHH Confidence 32 2444444331111 000011122222211111 0000 0 01110 01 123 Q ss_pred hhhcchHHHHHHHHHHHhhhhCc-----eeeecccc--------------ccccccCCccCCHHHHHHHHHHHHHHhCCe Q lcl|Aclame:pro 49 AALRNSDLFSIILQLSSDLAIVK-----INAEKKKN--------------QGIIDNPSTNANKHGFWQSMFAQLLLGGEA 109 (392) Q Consensus 49 ~a~~~~~v~~~i~~ia~~ia~~p-----~~~~~~~~--------------~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~ 109 (392) ..+.+|.|..||+.|.+.+.-+. +.+-=... +.++.--|-...+ ..++.+|...|.. T Consensus 81 ~ma~~pEvd~Av~eIVneaiv~d~~~~pV~l~Ld~~~~s~siK~kI~eeF~~Il~ll~F~~~~----~~~fR~WYVDgRi 156 (524) T protein:vir:10 81 NLMNNYEVDNAVQEIVSDAIVYEDDKEVVALNLDGTDFSQSIKDKILAEFSEVLNLLNFQRKG----TDHFQRWYVDSRI 156 (524) T ss_pred HHhhccchhhHHHHhhcceeEecCCCceEEEEecccCcchHHHHHHHHHHHHHHHHhccchhh----hHHHhhheeeceE Confidence 45678999999999999875331 11100000 0011111222223 3456777889999 Q ss_pred eEEEeec---cCCceEEEEEeccccceeee----cCccce-------EEEEEEec------C---cceeeeEEEeceeEE Q lcl|Aclame:pro 110 FAYRWRN---ANGADMKWEYLRPSQVNTYY----FEYENG-------MYYNITFD------D---PKIEPILQAPQSDLI 166 (392) Q Consensus 110 ~~~i~r~---~~G~~~~l~~l~~~~v~~~~----~~~~~~-------~~~~~~~~------~---~~~~~~~~~~~~~vi 166 (392) |..++-+ ...-+.+|..|+|..+..+. ..+++. .++.|... + ...+..+.++.+.|. T Consensus 157 ~fHkiid~~~pk~GI~Elr~lDPr~i~~vr~i~~~~~~~~~vi~~~~e~f~Y~~~~~~~~~~~~~~~~~~~ikI~~dAIv 236 (524) T protein:vir:10 157 FFHKIINPKKMKDGVQELRRLDPRQVQYIREIVTRMEDGVKIVDGYREFFVYDTGHESYCADGRIYSAGTKVKIPRAAVV 236 (524) T ss_pred EEEEEeeCCCccccceeeeeeCCccceeeeeecccCcccchhhcchhhheeecCCCcccccCcceecCCcceecchhhee Confidence 9887644 22348999999999997632 111111 11111110 0 123345678888888 Q ss_pred EecCC--CcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch---HHHHHHHHHHHhc----- Q lcl|Aclame:pro 167 HMKLL--SIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS---DKDKASRSRSFMK----- 236 (392) Q Consensus 167 h~~~~--~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~---~~~~~~~~~~~~~----- 236 (392) |.... +.++. .=+|-|..+.+.+....-++...--+=-..+.-+=|..++=+.... ++-.+.....+.. T Consensus 237 y~~SGL~d~~~~-~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDVGnlPk~KAeqYl~~im~k~kNKlvYD 315 (524) T protein:vir:10 237 YAHSGLLDCCGK-NIIGYLQRAIKPANQLKLMEDAMVIYRITRAPDRRVFYIDTGNMPSRKAAAQMQHIMNTMKNRVVYD 315 (524) T ss_pred eeccCcccCCCC-ceeccchHhhHHHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceeEEe Confidence 87532 22221 2356777776666555555444333322222222233333222221 1112222222211 Q ss_pred -----cccCCcee-ec----------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc----chH Q lcl|Aclame:pro 237 -----RSRSGGPV-VL----------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ----SSI 296 (392) Q Consensus 237 -----~~~~g~~~-vl----------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~----~~~ 296 (392) ..+..+.+ .| +.|.+++.|..... +.-++-.++..+....+++||.+-|+...++. .+. T Consensus 316 a~TGev~ddrk~msMlEDyWLpRReGgrgTEItTLpGgqn-lgem~DV~YF~kkLy~aLnVP~sRl~~e~~~~f~~gr~~ 394 (524) T protein:vir:10 316 ASTGKIKNQQHNMSMTEDYWLQRRDGKAVTEVDTMPGATG-MSDMDDVLYFRTALYRALRIPESRIPSESNSGVMFDAGT 394 (524) T ss_pred ccCCeeccchhhhhhHhhhcccccCCCCccceeeccccCC-cChHHHHHHHHHHHHHHhCCCchhccCCCCccccccccc Confidence 01111111 11 23566666654322 23345566778899999999999996432211 111 Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHhhhh--------------hcccchhhhhcchH--HH------HHHHHHHH--- Q lcl|Aclame:pro 297 Q--QISGMYASALNRYLRPAISELEYKLSDH--------------ISVNMRPAIDPLGD--NY------LSTISTAT--- 349 (392) Q Consensus 297 ~--~~~~~~~~~l~p~l~~i~~~l~~~l~~~--------------~~~d~~~~~~~~~~--~~------~~~~~~~~--- 349 (392) + --+-=+..+|.-+-......|..-|-+. +.-++...+..|.. ++ ...++.+- T Consensus 395 EItRDEiKF~KFI~rLR~rFs~lf~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~Eil~~R~~~l~~~d 474 (524) T protein:vir:10 395 AITRDELKFAKWIRQLQNKFEEIFLDPLKTNLILKKIITEDEWEREINNIKVTFNRDSYFSEMKDAEIMERRINMLTMAE 474 (524) T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHHhh Confidence 1 1122233444443333333333222111 01111111111111 11 11122211 Q ss_pred --hCCCcCHHHHHHHHHhCCCCcccccc---------ccCCCCCCCCCCCCC Q lcl|Aclame:pro 350 --RWGALAENQATFVLQEAGYIPKDLPA---------PENTNKKTTGQSNEP 390 (392) Q Consensus 350 --~~g~~T~nE~R~~l~~~g~~~~e~~~---------~e~~~~~~~gd~~~p 390 (392) -+..++.+=+|+...+ +...|+-. .+++-+-+..++++- T Consensus 475 pyvGky~s~~yi~k~ILr--~tDeei~~~~k~I~~E~k~~~~~~~~~~~~~f 524 (524) T protein:vir:10 475 PFIGKYISHQTAMKDFLQ--MTDEEINQEAKQIEEESKEARFQNPDEEEEDF 524 (524) T ss_pred hhhcccchhHHHHHHHhc--cCHHHHHHHHHHHHHHhhcCCCCCCChhhhcC Confidence 1333444444332211 11111100 011111111111111 No 245 >protein:vir:106282 Length: 521 # NCBI annotation: gp20 portal vertex protein of head # Family: family:all:1036 # MgeID: mge:1474 # MgeName: Aeh1 # Cross-refs: genbank:acc:NP_944108;genbank:gi:38640152;genbank:GeneID:2658030 Probab=28.53 E-value=1.7 Score=19.26 Aligned_cols=382 Identities=11% Similarity=0.127 Sum_probs=154.8 Q ss_pred Ccchh---hHhhcccccccc----cccccccccccchh----------------hhhhhhcCCCCc------cc-chhhh Q lcl|Aclame:pro 1 MILPI---LNFINQTNDPPE----VGSVQSYFPDGNDA----------------QIMESLLGDNNE------WV-SARAA 50 (392) Q Consensus 1 m~Mg~---~~~~~~~~~~~~----~~~~~~~~~~~~~~----------------~~~~~~~~~~~~------~v-~~~~a 50 (392) |...+ |.|..+...... .....++.++..+. .....+.+..+. -| .-+.. T Consensus 1 m~~~~l~lf~f~~k~~e~~~~~~~~~~~~s~~~p~~~dGa~~I~~~~~~~~~~~~~~~~~~~~~~~~~n~~eLI~~YR~m 80 (521) T protein:vir:10 1 MNPIFLKLLQPWMKDDEKRVQSDLSDRIDSFAVPDTADGAIEVDKQIDTTAPKTAIVQSVLGYAPKIQNTKDLINQYRSL 80 (521) T ss_pred CCcchhHHhhhhhhhhhhHHhhhhccCccccccccCCCCceeeccCCCccccccchhhhhhccccccchHHHHHHHHHHH Confidence 44433 333332211100 00111111111111 111122221111 01 12345 Q ss_pred hcchHHHHHHHHHHHhhhhCc-----eeee--ccc------------cccccccCCccCCHHHHHHHHHHHHHHhCCeeE Q lcl|Aclame:pro 51 LRNSDLFSIILQLSSDLAIVK-----INAE--KKK------------NQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFA 111 (392) Q Consensus 51 ~~~~~v~~~i~~ia~~ia~~p-----~~~~--~~~------------~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~ 111 (392) +.+|.|..||+.|.+.+.-+. +.+- ..+ .+.++.--|-...+ ..++.+|...|..|. T Consensus 81 a~~pEvd~Av~eIvneaiv~d~~~~pV~i~Ld~~~~s~~iK~kI~eeF~~Il~ll~F~~~~----~~~fR~WYVDgRi~f 156 (521) T protein:vir:10 81 SKYHEVDNAIDEIINDAIVQEDNRDTVYLDLDKTDWNESVKEMVREEFRTILKLLKFEREG----KRHFRRWYVDSRIYF 156 (521) T ss_pred hhccchhhHHHhhhcceEEecCCCceEEEEecCcccchHHHHHHHHHHHHHHHHhccchhh----hHHHhhheeeeeEEE Confidence 678999999999999875331 1110 000 00011111222222 345677788899998 Q ss_pred EEeec---cCCceEEEEEeccccceeeecC----ccc-------eEEEEEE------ec-CcceeeeEEEeceeEEEec- Q lcl|Aclame:pro 112 YRWRN---ANGADMKWEYLRPSQVNTYYFE----YEN-------GMYYNIT------FD-DPKIEPILQAPQSDLIHMK- 169 (392) Q Consensus 112 ~i~r~---~~G~~~~l~~l~~~~v~~~~~~----~~~-------~~~~~~~------~~-~~~~~~~~~~~~~~vih~~- 169 (392) .++-+ ...-+.+|..|+|..+..+... .++ .-++.|. +. .+..+..+.++.+.|.|.. T Consensus 157 Hkiid~~~pk~GI~Elr~lDPr~i~~vr~i~k~~~~~~~v~~~~~e~f~Y~~~~~~~~~~~g~~~~~vkI~~daI~y~hS 236 (521) T protein:vir:10 157 HKMIDPARPKDGIKELRLLDPRNVEYYRVNLKSNENGNDVYKGVKEFFTYGATEDNRYNISGNSNNLVQIPIDAIVYSHS 236 (521) T ss_pred EEEeeCCCccccceeeeeeCCcceeeeeeecCCCCCcchhhccceeeeeeccCCCceecCCCCCCcceeechhheeeecc Confidence 87644 2234899999999998654211 111 1111111 00 1122344667887777665 Q ss_pred -CCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCch---HHHHHHHHHHHhc--------- Q lcl|Aclame:pro 170 -LLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLS---DKDKASRSRSFMK--------- 236 (392) Q Consensus 170 -~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~---~~~~~~~~~~~~~--------- 236 (392) ..+.++ .+.+|-|..+.+.+....-++...--+=-..+.-+=|..++=+.... ++-.+.....+.. T Consensus 237 GL~d~~~-~~i~syLhkAiKp~NQLkm~EDAlVIYRitRAPeRRvFYIDvGnlpk~KAeqYl~~iM~k~kNklVYDa~TG 315 (521) T protein:vir:10 237 GKVDIDG-KTIVGYLHNVIKPANQLKMLEDAMVIYRITRAPERRVFYIDVGTMPNKKATQHLNNVMQGLKNRVVYDSSTG 315 (521) T ss_pred cceeCCC-CceeccchhhhHhHHhhHHHHhhHHHHhhhccccceEEEEecCCCCchhHHHHHHHHHHhcCceEEEeccCc Confidence 333334 45788888888777666655554433322222223333333222221 1112222222211 Q ss_pred -cccCCcee-ec----------cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCccccc----chH-HHH Q lcl|Aclame:pro 237 -RSRSGGPV-VL----------DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQ----SSI-QQI 299 (392) Q Consensus 237 -~~~~g~~~-vl----------~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~----~~~-~~~ 299 (392) ..+..+.+ .| +.|.+++.|..... +.-++-.++..+....+++||.+-|+..+.+. +++ .-- T Consensus 316 ev~ddrk~msMlEDyWLpRReGgrgTEI~TLpggqn-lgem~DV~YF~kkLy~aLnVP~sRl~~e~~~f~~Gr~~EItRD 394 (521) T protein:vir:10 316 KVKNSSNNLAMTEDYWLMRRDGKATTEVSTLPGAQS-MGEMDDVRWFNRKLYESMKIPLSRLPQEGAGVTFGAGNDITRD 394 (521) T ss_pred eeccchhhhhhHhhhcccccCCCCccceeeccccCC-cChHHHHHHHHHHHHHHhCCCccccCCCCCceecccccchhHH Confidence 11111111 11 23666666654322 23345566778899999999999997543211 111 111 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh--------------hcccchhhhhcchH--H---------HHHHHHHH----Hh Q lcl|Aclame:pro 300 SGMYASALNRYLRPAISELEYKLSDH--------------ISVNMRPAIDPLGD--N---------YLSTISTA----TR 350 (392) Q Consensus 300 ~~~~~~~l~p~l~~i~~~l~~~l~~~--------------~~~d~~~~~~~~~~--~---------~~~~~~~~----~~ 350 (392) +-=+..+|.-+-......|..-|-+. +.-++...+..|.. + +...+..+ +- T Consensus 395 EikF~KFI~rLR~rFs~~f~~~L~~qLilKgiit~eew~~i~~~I~~~f~~Dn~f~ElKe~eil~~R~~~l~~~dp~~yv 474 (521) T protein:vir:10 395 ELQFTKYIRGLQQQFEPIFLNPLRTNLMLKGKMSVSEWEEQAENIKVVFSKDSYYEEIKDVEILERRVNLVQTLASAEVT 474 (521) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCHHHHHHHhhcceEEeeecchHHHHHHHHHHHHHHHHHHhhcCcccc Confidence 22233444433333333333222111 01111111111111 1 11222222 12 Q ss_pred CCCcCHHHHHHHHHhCCCCcccccc----c-----cCCCCCCCCCCCCC Q lcl|Aclame:pro 351 WGALAENQATFVLQEAGYIPKDLPA----P-----ENTNKKTTGQSNEP 390 (392) Q Consensus 351 ~g~~T~nE~R~~l~~~g~~~~e~~~----~-----e~~~~~~~gd~~~p 390 (392) +..++.+=+++...+. ...|+-. + ++.-+-+..+..+- T Consensus 475 Gky~s~dyi~k~ILr~--tDeeik~~~k~I~~E~~~~~~~~p~~e~~df 521 (521) T protein:vir:10 475 GKYLSHEYVMKNILRM--SDEDIKTEREKIDGELKDSVYKNPEDPMEEF 521 (521) T ss_pred ccccchHHHHHHHhcC--CHhHHHHHHHHHHHhhhCCCCCCCcchhhcC Confidence 3345555554432211 1111110 0 11111111111111 No 246 >protein:vir:8883 Length: 543 # NCBI annotation: head-tail connector protein # Family: family:all:481 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813772;genbank:gi:29366727;genbank:GeneID:1258836 Probab=27.79 E-value=1.8 Score=19.17 Aligned_cols=328 Identities=14% Similarity=0.029 Sum_probs=124.4 Q ss_pred CcchhhHhhcccccccccccccccccccchhhh---------------hhhhcCCCCcccchhhh-------hcchHH-- Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQI---------------MESLLGDNNEWVSARAA-------LRNSDL-- 56 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~v~~~~a-------~~~~~v-- 56 (392) ++. +|..-.... ....... .+++.... ..||.- .++.... .....| T Consensus 40 lP~-~~~~~~~~~----~~~~~~~-~dst~~~a~~~Laa~l~~~ltP~~~WF~l----~~~d~~~~~~~~~~~~~~~v~~ 109 (543) T protein:vir:88 40 IPS-LFPKDSDNS----STDYTTP-WQAVGARGLNNLSAKVMLALFPLQSWMKL----KVSEWQAKQLVSDPSQLAVVEQ 109 (543) T ss_pred ccc-cCCCCCCcc----ccccccc-ccchHHHHHHHHHHHHHHhhcCCCccccc----ccChHHHhcccCChhhHHHHHH Confidence 332 111000000 0000000 11111111 111110 0110000 000111 Q ss_pred --HHHHHHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeeccCC----ceEEEEEeccc Q lcl|Aclame:pro 57 --FSIILQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNANG----ADMKWEYLRPS 130 (392) Q Consensus 57 --~~~i~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G----~~~~l~~l~~~ 130 (392) ..|-+.+-..+. +-| .+.=+..+..+|+.+||+.+++..+... .+...|||..- T Consensus 110 ~L~~ve~~~~~~~~----------------~sn----f~~~~~~~~~~L~~~G~a~ly~~~~~~~~~~~~~~~~~pl~~y 169 (543) T protein:vir:88 110 GLGMVERILMSYME----------------ANS----YRVTLFELIRQLALAGTALIYLPPPDASSNSYNPMKLYTLHNH 169 (543) T ss_pred HHHHHHHHHHHHHH----------------hcC----cHHHHHHHHHHHHhhCceeeeeccCccccceecceEEeEcceE Confidence 222222222222 222 2223455677788889988776543321 12333444222 Q ss_pred cceee--------------------------------ecCccceEEEEEEe--------------cCc---ceeeeEEEe Q lcl|Aclame:pro 131 QVNTY--------------------------------YFEYENGMYYNITF--------------DDP---KIEPILQAP 161 (392) Q Consensus 131 ~v~~~--------------------------------~~~~~~~~~~~~~~--------------~~~---~~~~~~~~~ 161 (392) .|... .+.+....++..-+ .+. .....+.+. T Consensus 170 ~v~~d~~G~v~~i~r~~~~~~~~l~~~~~~~v~~~~~~~p~~~~~v~~~V~pr~~~~~~~~~~~~~~~~v~~~~~~~~~~ 249 (543) T protein:vir:88 170 VVQRDAFGNVLQIVTLDKVAYAALPEDVRNSLSGGQEYKPEQELEVYTHIYIDDESGDFLSYQEIEGVEVDGSDGQYPQD 249 (543) T ss_pred EEeeCCCCCeeeeeeeeeccHHHHhHHhhHHHHHHhhcCCccceEEEEEEEeecCCCcccccccccCeeeecCCCccccc Confidence 11110 00000011111000 000 000112233 Q ss_pred ceeEEEecCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCC Q lcl|Aclame:pro 162 QSDLIHMKLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSG 241 (392) Q Consensus 162 ~~~vih~~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g 241 (392) .-.++..+....+|..||.||...+...+.....+.+...........|..++..++. ....... .+.. T Consensus 250 e~P~i~~Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~~~~pp~~v~~~g~-~~~~~~~-------~~~~--- 318 (543) T protein:vir:88 250 ALPWIAVRWTKRDGEHYGRSHVEEYLGDLNSLESLNEAMIKFAMISSKVVGLVNPNGI-TQVRRLV-------KAQT--- 318 (543) T ss_pred cCCceeeeeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccc-cchhhcc-------cCCC--- Confidence 3456666766677888999999999999999999998888888888888755433221 1111111 1111 Q ss_pred ceeec--cCCceEeecccChhhHHHHHHHHHHHHHHHHHhcccHHHcCCcccccchH-HHHHHHHHHHHHHHHHHHHHHH Q lcl|Aclame:pro 242 GPVVL--DDLEEFTALEIKSNVAQLLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSI-QQISGMYASALNRYLRPAISEL 318 (392) Q Consensus 242 ~~~vl--~~g~~~~~l~~~~~d~~~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~-~~~~~~~~~~l~p~l~~i~~~l 318 (392) +.++- .++....++...++-.-..+..+..+..|-.+|-+.....-....-|.++ .....-....|.|.+..+.++| T Consensus 319 g~~v~g~~~~v~~~~~~~~~~~~~~~~~i~~~~~rI~~af~~~~~~~~~~~r~TAtEV~~r~~E~~~~LG~v~~rl~~E~ 398 (543) T protein:vir:88 319 GDFVAGRKADIEFLQLEKTADFTVAKSVADAIEARLSYVFMLNSAVQRSGERVTAEEIRYVASELEDTLGGVYSILSQEL 398 (543) T ss_pred ceeecCCCCcceeeecccccchhHHHHHHHHHHHHHHHHHhhhhhccCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHH Confidence 11222 23444555554332222345667777888888866532111112223222 2334445667777777777776 Q ss_pred HHHhhhh-hcc-cchhhhhcchHHHHHHHHHHHhCCCcCH------HHHHHHHHhCCCCccccccccCCCCCCCCCCCCC Q lcl|Aclame:pro 319 EYKLSDH-ISV-NMRPAIDPLGDNYLSTISTATRWGALAE------NQATFVLQEAGYIPKDLPAPENTNKKTTGQSNEP 390 (392) Q Consensus 319 ~~~l~~~-~~~-d~~~~~~~~~~~~~~~~~~~~~~g~~T~------nE~R~~l~~~g~~~~e~~~~e~~~~~~~gd~~~p 390 (392) -.-|... +.+ .....+..-..+ .++..+.|. +...+.+. +.+.-...+ . T Consensus 399 l~Pli~r~~~il~r~g~lP~~p~~-------~v~~~~vs~l~~l~r~~~~~~l~---------~~~~~v~~~-------~ 455 (543) T protein:vir:88 399 QLPIVRVLLNQLQATQQIPNLPQE-------AVEPTVTTGAEALGRGQDLDKLT---------QFLNAVATV-------S 455 (543) T ss_pred HHHHHHHHHHHHHhcCCCCCCchh-------ceeeeEEecHHHHHHHHHHHHHH---------HHHHHHHhc-------c Confidence 4332211 000 000000000000 011111110 10000000 000111111 1 Q ss_pred CC Q lcl|Aclame:pro 391 VP 392 (392) Q Consensus 391 ~p 392 (392) +| T Consensus 456 ~p 457 (543) T protein:vir:88 456 QL 457 (543) T ss_pred ch Confidence 15 No 247 >protein:vir:94572 Length: 535 # NCBI annotation: Head-to-tail joining protein # Family: family:all:481 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919010;genbank:gi:119637774;genbank:GeneID:5179332 Probab=26.05 E-value=2 Score=18.95 Aligned_cols=336 Identities=13% Similarity=0.036 Sum_probs=118.4 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhh--------hhhcCC--C-Ccccchh---hhhcch--------HHHH Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIM--------ESLLGD--N-NEWVSAR---AALRNS--------DLFS 58 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--~-~~~v~~~---~a~~~~--------~v~~ 58 (392) ++.. +.+-..... ..... ..+++..... ..++.. + ...++.. .....+ .... T Consensus 41 lP~~-~~~~~~~~~----~~~~~-~~dst~~~a~~~Laa~l~~~ltP~~~WF~l~~~d~~~~~~~~~~~~~~~v~~~L~~ 114 (535) T protein:vir:94 41 IPSL-FPKDSDNAS----TDYTT-PWQAVGARGLNNLASKLMLALFPMQTWMKLTISEFEAKQLVAQPAELAKVEEGLSM 114 (535) T ss_pred cccc-CCCCCCccc----cccCC-cccccHHHHHHHHHHHHHhhhcCCCCccccccChhhhhccccchhHHHHHHHHHHH Confidence 3321 111000000 00000 0011110000 000000 0 0000000 000001 1122 Q ss_pred HHHHHHHhhhhCceeeeccccccccccCCccCCHHHHHHHHHHHHHHhCCeeEEEeecc-CCceEEEEEecccccee--- Q lcl|Aclame:pro 59 IILQLSSDLAIVKINAEKKKNQGIIDNPSTNANKHGFWQSMFAQLLLGGEAFAYRWRNA-NGADMKWEYLRPSQVNT--- 134 (392) Q Consensus 59 ~i~~ia~~ia~~p~~~~~~~~~~~~~~PN~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~-~G~~~~l~~l~~~~v~~--- 134 (392) |-+.+-..+. +-| .+.=...+..+|+.+||+.+++..+. .+.....||+..-.|.. T Consensus 115 ve~~~~~~~~----------------~sn----f~~~~~~~~~~L~~~G~a~l~~~~~~~~~~~f~~~pl~~y~v~~d~~ 174 (535) T protein:vir:94 115 VERILMNYIE----------------SNS----YRVTLFETLKQLVVAGNALLYIPEPEGTYNPMKLYRLSSYVVQRDAF 174 (535) T ss_pred HHHHHHHHHH----------------hcC----cHHHHHHHHHHHHhhCcEeEeeccCcCcccceEEEEcCeEEEeeCCC Confidence 2222222222 222 22224456677778888877764332 12222333332111110 Q ss_pred -------------------------------------------eecCccceEEEEEEecCcce-e--eeEEEeceeEEEe Q lcl|Aclame:pro 135 -------------------------------------------YYFEYENGMYYNITFDDPKI-E--PILQAPQSDLIHM 168 (392) Q Consensus 135 -------------------------------------------~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~vih~ 168 (392) +++..+.....++..++... + ....+..-.++.. T Consensus 175 G~vd~i~r~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~v~~~v~~~~~~~~~~~~~e~~g~~~~~~~~~~g~~~~P~~~~ 254 (535) T protein:vir:94 175 GTVLQIVTLDKTAYAALPEDVRNSMDSSQEHKGDEMIDVYTHIYLDEESGEYLKYEEIDGVEVEGTDASYPVDACPYIPV 254 (535) T ss_pred CCeEEEEeeeeccHHHhhHHHHHHHHhccccCCCceeEEEEEEEeeCCCCcEEEEEEecCeeeccccccCccccCCceee Confidence 01111111111111111110 0 1112344456666 Q ss_pred cCCCcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCce-eecc Q lcl|Aclame:pro 169 KLLSIDGGKTGISPLYSLRRESKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGP-VVLD 247 (392) Q Consensus 169 ~~~~~~~~~~G~s~~~~~~~~i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~vl~ 247 (392) |....+|..||.||..-+...+.....+.+.......-...|..++.- .+....+.. ....+ |.+ .... T Consensus 255 Rw~~~~ge~YGrgp~~~~l~D~k~L~~l~~~~l~~~~~a~~~~~lv~p-~g~~~~~~~--------~~~~~-g~~v~g~~ 324 (535) T protein:vir:94 255 RMVRIDGESYGRSYCEEYLGDLRSLENLQEAIVKMSMISAKVIGLVNP-AGITQVRRL--------TKAQT-GDFVSGRP 324 (535) T ss_pred eeeecCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccc-ccccchhhc--------ccCCC-ceeecCCc Confidence 776677888999999999999888888887777766655555433332 111111111 11111 111 1122 Q ss_pred CCceEeecccChhhHH-HHHHHHHHHHHHHHHhcccHHHcCCcccccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhh Q lcl|Aclame:pro 248 DLEEFTALEIKSNVAQ-LLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSI-QQISGMYASALNRYLRPAISELEYKLSDH 325 (392) Q Consensus 248 ~g~~~~~l~~~~~d~~-~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~-~~~~~~~~~~l~p~l~~i~~~l~~~l~~~ 325 (392) ++....++...+ +.+ ..+..+..+..|-.+|-+.....-....-|.++ ..........|.|.+..+.++|-.-|... T Consensus 325 ~~v~~~~~~~~~-~~~~~~~~i~~~~~rI~~af~~~~~~~~d~~rvTAtEV~~r~~E~~~~LGpv~~rl~~ElL~Pli~r 403 (535) T protein:vir:94 325 EDISFLQLEKAA-DFSVARAVSEQIEGRLSYAFMLNSAVQRTGERVTAEEIRYVASELEDTLGGVYSILSQELQLPMVRV 403 (535) T ss_pred ccceeeeccccc-chhHHHHHHHHHHHHHHHHHhHhhhccCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH Confidence 344455555333 333 345566677888888843321111111123222 23344456677777777777764332211 Q ss_pred -hcc-cchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccccccccC-CCCCCCCCCCCCCC Q lcl|Aclame:pro 326 -ISV-NMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKDLPAPEN-TNKKTTGQSNEPVP 392 (392) Q Consensus 326 -~~~-d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e~~~~e~-~~~~~~gd~~~p~p 392 (392) +.+ .....+..-..+ +++..+.|+=+.- .+. .++-.+.. +..+ .+-.| T Consensus 404 ~~~il~r~g~lP~~p~~-------~v~~~~vs~la~l---~r~----~~~~~l~~~~~~l-----aq~~P 454 (535) T protein:vir:94 404 LLKQLQATNQIPELPKE-------AVEPTISTGMEAL---GRG----QDLDKLERCIAAW-----SALAP 454 (535) T ss_pred HHHHHHhCCCCCCCChh-------hccceEeehHHHH---HHH----HHHHHHHHHHHHH-----HhhCh Confidence 000 000001000000 1111111110000 000 00000000 0001 11224 No 248 >protein:vir:95014 Length: 491 # NCBI annotation: structural protein # Family: family:all:584 # MgeID: mge:1547 # MgeName: KS7 # Cross-refs: genbank:acc:YP_224035;genbank:gi:62327322;genbank:GeneID:5176842 Probab=25.31 E-value=2.1 Score=18.85 Aligned_cols=370 Identities=9% Similarity=-0.057 Sum_probs=148.8 Q ss_pred CcchhhHhhcccccccccccccccccccchhhhhhhhcCCCCcccchhhhhcchHHHHHHHHHHHhhhhCceeeeccccc Q lcl|Aclame:pro 1 MILPILNFINQTNDPPEVGSVQSYFPDGNDAQIMESLLGDNNEWVSARAALRNSDLFSIILQLSSDLAIVKINAEKKKNQ 80 (392) Q Consensus 1 m~Mg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~a~~~~~v~~~i~~ia~~ia~~p~~~~~~~~~ 80 (392) .|.-+-+.+..-........+-..-+......-+.... ..|.-.+++...++.++..+-+-|+.+- -... T Consensus 24 ~W~~ird~~~G~~~~~~r~~yl~~~~~~~~e~~Y~~rl---------~rA~~~n~~~~tl~~l~G~vfrk~p~~~-~p~~ 93 (491) T protein:vir:95 24 KWQKVRHALAGDLVGYLRNVGLNEPDKAYGEARQAEYE---------AGGIVYNFTRRTLSGMVGSVMRKEPEIN-IPKE 93 (491) T ss_pred HHHHHHHHhcCcchhhcccCCCcCCCCCCCHHHHHHHH---------hcccCCChHHHHHHHHhchhhcCCceee-ccHH Confidence 22222222222100000001111000000000011000 0111224556677777777766666542 1111 Q ss_pred cccccCC---ccCCHHHHHHHHHHHHHHhCCeeEEEeeccCC------------ceEEEEEeccccc---eee------- Q lcl|Aclame:pro 81 GIIDNPS---TNANKHGFWQSMFAQLLLGGEAFAYRWRNANG------------ADMKWEYLRPSQV---NTY------- 135 (392) Q Consensus 81 ~~~~~PN---~~~s~~~f~~~~~~~l~l~Gn~~~~i~r~~~G------------~~~~l~~l~~~~v---~~~------- 135 (392) ..--..| ...+-.+|.+.++...+.+|-+++++..+..+ +|. +..+.|..| ... T Consensus 94 l~~l~~d~D~~G~~L~~f~~~~~~~~l~~G~~~ilVD~P~~~~~T~Ade~~~~~rPy-~~~~~~~~IinW~~~~v~g~~~ 172 (491) T protein:vir:95 94 LEYLLKNADGSGVGLIQHAQDTLMEIDSVGRGGLLVDAPETAAATAAEQNAGLLNPT-IAFYTTENIVNWRLTRVGSVNR 172 (491) T ss_pred HHHHHhccCCCCCCHHHHHHHHHHHHHHcCeEEEEEecCCCcccCHHHHHHhcCCcE-EEEechhhhcCceeeeeCCcee Confidence 1111222 34688899999999999999999998865443 122 222222222 000 Q ss_pred ------------e---cCccceEEEEEE---e------------cCcceeee---E---------EEeceeEEEecCCCc Q lcl|Aclame:pro 136 ------------Y---FEYENGMYYNIT---F------------DDPKIEPI---L---------QAPQSDLIHMKLLSI 173 (392) Q Consensus 136 ------------~---~~~~~~~~~~~~---~------------~~~~~~~~---~---------~~~~~~vih~~~~~~ 173 (392) . +.++......|. . .+..++.. . .+..-.++.+-. .. T Consensus 173 L~~v~l~E~~~~~d~~~~f~~~~~~qyRvL~l~~~g~~~~~v~r~~~~g~~~~~~~~~~~~~g~~~l~~IPfv~~~~-~~ 251 (491) T protein:vir:95 173 VTMVVLRETWEYHEPGNEFETKYGEQYRVLDIDTDGNYRQRLFRFDAEGGAQEEVVEIYPDLGESLRGVIPFTFIGA-TN 251 (491) T ss_pred eeEEEEEEeEEeecCCCCcccceEEEEEEEeecCCCceEEEEEEEcCCCcceeeeeeeeecCCCcccCeeEEEEEec-CC Confidence 0 011111000000 0 00000000 0 011111122211 23 Q ss_pred ccccccCCHHHHHHHH-HHHHHHHHHHHHHHHHcCCCcceEEEeCCCCCchHHHHHHHHHHHhccccCCceeeccCCceE Q lcl|Aclame:pro 174 DGGKTGISPLYSLRRE-SKIQRASDRLTISSLNSSLNVPGVLTVKGGGLLSDKDKASRSRSFMKRSRSGGPVVLDDLEEF 252 (392) Q Consensus 174 ~~~~~G~s~~~~~~~~-i~~~~~~~~~~~~~~~ng~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~vl~~g~~~ 252 (392) .+...|.+|+..++.. +.-......+ ...+...++|-.+++.-.....+....-....-..| ++..+.|+.|.++ T Consensus 252 ~~~~~~~pPLl~LA~lni~Hy~~ssd~-~~~l~~~~~P~l~~~G~d~~~~~~~~~~~~~~i~~g---~~~~~~lP~~~~~ 327 (491) T protein:vir:95 252 NDATIDDAPLLPLAELNIGHYRNSADN-EESSFVVGQPTLFIYPGDNLTPQSFKEANPNGIKFG---SRCGHNLGYGGSA 327 (491) T ss_pred CCCCCCcCchHHHHHHHHHHhhhhhHH-HHHHHHcccceeeeecCcccCcchhhccCcceeEec---CcCCcCCCCCCcc Confidence 3455678888877653 3333333333 334455566766665422221111100000111112 2234555555444 Q ss_pred eecccChhhHH--HHHHHHHHHHHHHHHhcccHHHcCCcccccchHHHH-HHHHHHHHHHHHHHHHHHHHHHhh---h-- Q lcl|Aclame:pro 253 TALEIKSNVAQ--LLSQTDWTSKQYAKVYGLPDSYIGGQGDQQSSIQQI-SGMYASALNRYLRPAISELEYKLS---D-- 324 (392) Q Consensus 253 ~~l~~~~~d~~--~~e~~~~~~~~Ia~~fgVP~~~lg~~~~~~~~~~~~-~~~~~~~l~p~l~~i~~~l~~~l~---~-- 324 (392) .-+...++.+. -++.++.....+-+ .++-.....+...... ...-...|.-++..+++++++.|- . T Consensus 328 ~~ie~~~~~~~~~~l~~~e~qm~~~Ga------~l~~~~~~~Ta~~~~~~~~~~~S~L~~~a~~~e~al~~~l~~~a~w~ 401 (491) T protein:vir:95 328 QLIQAGENNLARQNMLDKEQQAIQIGA------QLITPSQQITAESARIQRGADTSVMATIARNVSQAYTDALRWVAMML 401 (491) T ss_pred ceeecCcchHHHHHHHHHHHHHHHHHH------HhccCCcchhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHc Confidence 44443332221 12222223233322 2232111112111122 223356777788888888877652 1 Q ss_pred ------hhcc--cchhhhhcchHHHHHHHHHHHhCCCcCHHHHHHHHHhCCCCccc----cccccCCCCCCCC--CCCCC Q lcl|Aclame:pro 325 ------HISV--NMRPAIDPLGDNYLSTISTATRWGALAENQATFVLQEAGYIPKD----LPAPENTNKKTTG--QSNEP 390 (392) Q Consensus 325 ------~~~~--d~~~~~~~~~~~~~~~~~~~~~~g~~T~nE~R~~l~~~g~~~~e----~~~~e~~~~~~~g--d~~~p 390 (392) ...+ +.++............+-.++++|.++....++.|.+.|+.+.+ ..++++-.+..++ ...-- T Consensus 402 G~~~~~~v~i~~n~dF~~~~~~~~~~~all~~~~~G~is~~t~~~~L~~~~vl~~~~e~~~~~ie~~~~~~~~~~~~~~~ 481 (491) T protein:vir:95 402 GKPEDSEVEFQLNMDFFLQPMTAQDRAAWMADINAGLLPATAYYAALRKAGVTDWTDEDILNAIEDAPLPSGAVTQVAGE 481 (491) T ss_pred CCCCCCceEEEeecccccccCCHHHHHHHHHHHhcCCCCHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCcccccccc Confidence 1222 22222222223345667778889999999999999888876422 1222222111111 00111 Q ss_pred CC Q lcl|Aclame:pro 391 VP 392 (392) Q Consensus 391 ~p 392 (392) .| T Consensus 482 ~~ 483 (491) T protein:vir:95 482 IP 483 (491) T ss_pred ch Confidence 11 Done!