Query lcl|Aclame:protein:vir:4198|NCBI_annot:unknown|genbank:acc:NP_071823;genbank:gi:11863106;genbank:GeneID:1257608 Match_columns 106 No_of_seqs 2 out of 5 Neff 1.3 Searched_HMMs 1612 Date Sat Nov 30 03:12:38 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_21 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_21_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:4198 Length: 106 # 100.0 1.9E-76 1.2E-79 435.7 10.1 106 1-106 1-106 (106) 2 protein:vir:4160 Length: 110 # 100.0 1.3E-64 8.3E-68 370.8 9.1 102 1-102 1-110 (110) 3 protein:vir:94761 Length: 132 38.4 0.55 0.00034 22.0 4.3 104 1-104 1-132 (132) 4 protein:vir:9576 Length: 131 # 30.7 0.8 0.0005 21.1 3.9 104 1-104 1-131 (131) 5 protein:vir:1640 Length: 132 # 24.5 0.48 0.0003 22.4 1.5 102 1-104 1-132 (132) 6 protein:vir:9761 Length: 140 # 12.8 4.9 0.0031 16.8 4.3 106 1-106 1-133 (140) 7 protein:vir:99517 Length: 124 3.0 22 0.014 13.2 2.4 105 1-105 6-124 (124) 8 protein:vir:108295 Length: 711 2.6 15 0.0091 14.2 0.9 86 1-106 1-135 (711) 9 protein:vir:81069 Length: 115 1.5 35 0.022 12.1 1.0 87 1-94 1-115 (115) 10 protein:vir:97069 Length: 115 1.4 46 0.028 11.5 4.5 91 1-94 1-115 (115) No 1 >protein:vir:4198 Length: 106 # NCBI annotation: unknown # Family: family:all:11762 # MgeID: mge:88 # MgeName: psiM100 # Cross-refs: genbank:acc:NP_071823;genbank:gi:11863106;genbank:GeneID:1257608 Probab=100.00 E-value=1.9e-76 Score=435.65 Aligned_cols=106 Identities=100% Similarity=1.476 Sum_probs=106.0 Q ss_pred CCCCcceEEEecccccchhHHHHHhhhhHHhhhhhhccCCCCchhhhHHHHHHHHHHHHhhhccccCceeeeeeCchhHH Q lcl|Aclame:pro 1 MNPKHDIYIHLGLDEADESLQAFIDRKIEEYRARAERINPHAPEDIVDEYVVAMILNDLTKDMNFTDGRFSITEQAEDVR 80 (106) Q Consensus 1 mnpkhdi~i~l~~de~~~s~~afi~~kieey~~raerinp~ap~~i~deyv~a~il~~~~~d~~fsdgrfsit~~~~~~~ 80 (106) ||||||||||||+||+++|+||||+||||||++||||||||||||||||||||||||+|+|||||||||||||||||||+ T Consensus 1 mnpkhdi~i~l~~de~~~s~~afi~~kieey~~raerinp~ap~~i~deyv~a~il~~~~~d~~fsdgrfsit~~~~~~~ 80 (106) T protein:vir:41 1 MNPKHDIYIHLGLDEADESLQAFIDRKIEEYRARAERINPHAPEDIVDEYVVAMILNDLTKDMNFTDGRFSITEQAEDVR 80 (106) T ss_pred CCCCcceEEEecccccchhHHHHHhhhhHHhhhhhhccCCCCchhhhHHHHHHHHHHHHhhhccccCceeeeeeCchhHH Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred HHHhhhhhhhccceeecCcccCCCCC Q lcl|Aclame:pro 81 RRLSHALLRLQGMRIWRPRDDGDEED 106 (106) Q Consensus 81 ~r~~~allrlqg~riwrpr~dgdeed 106 (106) |||||||||||||||||||||||||| T Consensus 81 ~r~~~allrlqg~riwrpr~dgdeed 106 (106) T protein:vir:41 81 RRLSHALLRLQGMRIWRPRDDGDEED 106 (106) T ss_pred HHHhhhhhhhccceeecCcccCCCCC Confidence 99999999999999999999999999 No 2 >protein:vir:4160 Length: 110 # NCBI annotation: unknown # Family: family:all:11762 # MgeID: mge:87 # MgeName: psiM2 # Cross-refs: genbank:acc:NP_046969;genbank:gi:9630539;genbank:GeneID:1261713 Probab=100.00 E-value=1.3e-64 Score=370.77 Aligned_cols=102 Identities=54% Similarity=0.840 Sum_probs=101.2 Q ss_pred CCCCcceEEEecccccchhHHHHHhhhhHHhhhhhhccCCCCchhhhHHHHHHHHHHHHhhhc-----cccCceeeeeeC Q lcl|Aclame:pro 1 MNPKHDIYIHLGLDEADESLQAFIDRKIEEYRARAERINPHAPEDIVDEYVVAMILNDLTKDM-----NFTDGRFSITEQ 75 (106) Q Consensus 1 mnpkhdi~i~l~~de~~~s~~afi~~kieey~~raerinp~ap~~i~deyv~a~il~~~~~d~-----~fsdgrfsit~~ 75 (106) |-.-.|||||||+||+++|+||||+||||||++||||||||||||||||||||||||+|+||| |||||||||||| T Consensus 1 mitiedi~i~l~~de~~~s~~afi~~kieey~~raerinp~ap~~i~deyv~a~vl~~~~~d~tdgvs~fsdgrfsvt~~ 80 (110) T protein:vir:41 1 MITIEDIRIELRRDELTDSEEAFITKKIEEYTLRAERINPTAPDHIKDEYVLAGVLQAFLTDYTDGVSSFSDGRFSVTMR 80 (110) T ss_pred CcceeeeeeeecccccchhHHHHHhhhhHHhhhhhhccCCCCchhhhHHHHHHHHHHHHHhhhhcccccccCceeeeeec Confidence 999999999999999999999999999999999999999999999999999999999999999 999999999999 Q ss_pred c---hhHHHHHhhhhhhhccceeecCcccC Q lcl|Aclame:pro 76 A---EDVRRRLSHALLRLQGMRIWRPRDDG 102 (106) Q Consensus 76 ~---~~~~~r~~~allrlqg~riwrpr~dg 102 (106) | |||+|||||||||||||||||||||. T Consensus 81 ~pld~~~~~r~~~allrlqg~riwrpr~de 110 (110) T protein:vir:41 81 PPLDHPSIQRFRGALLRLQGIRIWRPRQDE 110 (110) T ss_pred CCCcchHHHHHHhhhhhhcceeeccCCCCC Confidence 9 99999999999999999999999998 No 3 >protein:vir:94761 Length: 132 # NCBI annotation: unknown # Family: family:all:1271 # MgeID: mge:1529 # MgeName: phi LC3 # Cross-refs: genbank:acc:NP_996708;genbank:gi:45597423;genbank:GeneID:2769029 Probab=38.38 E-value=0.55 Score=22.01 Aligned_cols=104 Identities=14% Similarity=0.125 Sum_probs=54.7 Q ss_pred CCCCcceE-EEecccccchhHHHHHhhhhHH----hhhhhhc-------c---CCCCchhhhHHHHHHHHHHHHhhh--- Q lcl|Aclame:pro 1 MNPKHDIY-IHLGLDEADESLQAFIDRKIEE----YRARAER-------I---NPHAPEDIVDEYVVAMILNDLTKD--- 62 (106) Q Consensus 1 mnpkhdi~-i~l~~de~~~s~~afi~~kiee----y~~raer-------i---np~ap~~i~deyv~a~il~~~~~d--- 62 (106) |+|--++- ++.+.-++++.+++-...-|+. -+.++.+ . +|.+.+....--+++||..++++. T Consensus 1 m~~fAtv~Dl~~r~r~L~~dE~~ra~~LL~dAs~~iR~~~~~~~~~~~~~~~~~~d~~~~~~k~V~~~~V~Ral~~~~~~ 80 (132) T protein:vir:94 1 MNPFATVDDLTMLWRPLKGDEKERAEKLLEIVSDTLREEADKVGRDLDVMISEKPSYFSSVVKSVTVDIVARTLMTSTDQ 80 (132) T ss_pred CCCcCCHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhhccccccccCCCCccchhHHHHHHHHHHHHHhcCCCCC Confidence 87754321 1122235555554333322222 2222222 1 344445566667789999999865 Q ss_pred -----ccccCcee--eeeeCc---hhHHHHHhhhhhhhccceeecCcccCCC Q lcl|Aclame:pro 63 -----MNFTDGRF--SITEQA---EDVRRRLSHALLRLQGMRIWRPRDDGDE 104 (106) Q Consensus 63 -----~~fsdgrf--sit~~~---~~~~~r~~~allrlqg~riwrpr~dgde 104 (106) +|.|.|-| |.|..- .-.+-.--..+|++-|.|+|----.|.. T Consensus 81 ~g~tq~S~TaG~ys~S~T~~np~G~lylt~~e~~~LGl~~~r~~~i~~~~~~ 132 (132) T protein:vir:94 81 EPMTQTTESALGYSVSGSYLVPGGGLFIKNSELSRLGLKKQRFGVIDFYGND 132 (132) T ss_pred CCceeeeeecccceeeeeeecCCCCceeChHHHHhhCCCCCceEEEeecCCC Confidence 36788988 455432 1122222345567777888876655554 No 4 >protein:vir:9576 Length: 131 # NCBI annotation: gp42 # Family: family:all:1271 # MgeID: mge:171 # MgeName: SM1 # Cross-refs: genbank:acc:NP_862881;genbank:gi:32469473;genbank:GeneID:1461318 Probab=30.73 E-value=0.8 Score=21.11 Aligned_cols=104 Identities=11% Similarity=0.024 Sum_probs=55.1 Q ss_pred CCCCcceE-EEecccccchhHHHHHhhhhHHhh----hhhhcc--CCCC---c----hhhhHHHHHHHHHHHHhhh---- Q lcl|Aclame:pro 1 MNPKHDIY-IHLGLDEADESLQAFIDRKIEEYR----ARAERI--NPHA---P----EDIVDEYVVAMILNDLTKD---- 62 (106) Q Consensus 1 mnpkhdi~-i~l~~de~~~s~~afi~~kieey~----~raeri--np~a---p----~~i~deyv~a~il~~~~~d---- 62 (106) |+|--++- ++.+.-++++.+++-+..-|+.-. .++.+. |+++ + +-.+..-++++|..+++++ T Consensus 1 m~~fAtv~D~~~rwr~Lt~~E~~ra~~LL~~As~~ir~~~p~~~~~l~~~~~~~~~~~~~~~~V~~~~V~Ral~~~~~~~ 80 (131) T protein:vir:95 1 MENFATVEDLKKLWRALKFDEEKRAEALLEVVSHSLRVEAKKVGKDLDGLVATDPSFTMVVKSVTVDVVARTLMTSTDQE 80 (131) T ss_pred CCccCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccCCccchHHHHHHHHHHHHHHhcCCCCCC Confidence 88754321 122334677776655554444322 222221 2221 1 2234446678888888755 Q ss_pred ----ccccCceeeee--eCc---hhHHHHHhhhhhhhccceeecCcccCCC Q lcl|Aclame:pro 63 ----MNFTDGRFSIT--EQA---EDVRRRLSHALLRLQGMRIWRPRDDGDE 104 (106) Q Consensus 63 ----~~fsdgrfsit--~~~---~~~~~r~~~allrlqg~riwrpr~dgde 104 (106) +|.|.|-||-+ ..- .-.+-.---++|++-|.|+|----.|.. T Consensus 81 G~tq~S~TaG~ys~S~t~~~p~g~lylt~~e~~~LGl~~~r~~~i~~~~~~ 131 (131) T protein:vir:95 81 PMTQVAESALGYSFSGSYLVPGGGLFIKDSELKRLGLKKQRYGVIDIYGTD 131 (131) T ss_pred CceeeeeecccceeeeeeecCCCCceeChHHHHHhCCCCCceeEEeeccCC Confidence 57999999544 432 1122222345667778888876655554 No 5 >protein:vir:1640 Length: 132 # NCBI annotation: hypothetical protein # Family: family:all:1271 # MgeID: mge:33 # MgeName: r1t # Cross-refs: genbank:acc:NP_695061;genbank:gi:23455752;genbank:GeneID:955488 Probab=24.49 E-value=0.48 Score=22.35 Aligned_cols=102 Identities=16% Similarity=0.140 Sum_probs=53.9 Q ss_pred CCCCc---ceEEEecccccchhHHHHHhhhhHHh----hhhhhcc--C--------CCCchhhhHHHHHHHHHHHHhhh- Q lcl|Aclame:pro 1 MNPKH---DIYIHLGLDEADESLQAFIDRKIEEY----RARAERI--N--------PHAPEDIVDEYVVAMILNDLTKD- 62 (106) Q Consensus 1 mnpkh---di~i~l~~de~~~s~~afi~~kieey----~~raeri--n--------p~ap~~i~deyv~a~il~~~~~d- 62 (106) |+|-- |+. .+.-.+++.+++.+..-|+.- +.++.+. | |.+.+.....-+++||..++..+ T Consensus 1 m~~fAtv~Dv~--~r~r~L~~~E~~ra~~lL~dAs~~ir~~~p~~~~~l~a~~~e~~~~~~~~~~~V~~~~V~Ral~~~~ 78 (132) T protein:vir:16 1 MNPFATVDDLT--MLWRPLKGDEKERAEKLLEIVSDSLREEADKVGRDLYAMIAEKPSYFASVVKSVTVDIVARTLMTST 78 (132) T ss_pred CCccCCHHHHH--HHhcCCCHhHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccchhHHHHHHHHHHHHHhcCCC Confidence 87753 333 223366666655444444332 2222111 1 22222334455688999999875 Q ss_pred -------ccccCceee--eeeCch---hHHHHHhhhhhhhccceeecCcccCCC Q lcl|Aclame:pro 63 -------MNFTDGRFS--ITEQAE---DVRRRLSHALLRLQGMRIWRPRDDGDE 104 (106) Q Consensus 63 -------~~fsdgrfs--it~~~~---~~~~r~~~allrlqg~riwrpr~dgde 104 (106) +|.|.|-|| .|..-. -.+-.=--++|++-|-|+|----.|.. T Consensus 79 ~~~G~tq~S~TaG~ys~S~t~~~p~G~lylt~~e~~~LG~~~~r~~~i~~~~~~ 132 (132) T protein:vir:16 79 DQEPMTQTTESALGYSVSGSYLVPGGGLFIKNSELSRLGLKKQRFGVIDFYGND 132 (132) T ss_pred CCCCceeeeeeccchheeeeeecCCCcceeChHHHHhhCCCCCceEEEeecCCC Confidence 478999994 444321 111122234677778888876666655 No 6 >protein:vir:9761 Length: 140 # NCBI annotation: hypothetical protein # Family: family:all:1271 # MgeID: mge:175 # MgeName: 315.3 # Cross-refs: genbank:acc:NP_795523;genbank:gi:28876281;genbank:GeneID:1257822 Probab=12.76 E-value=4.9 Score=16.78 Aligned_cols=106 Identities=10% Similarity=-0.022 Sum_probs=52.8 Q ss_pred CCCCcceE-EEecccccchhHHHHHhhhhHHhhh----hhhcc---------CCCCchhhhHHHHHHHHHHHHhh--hc- Q lcl|Aclame:pro 1 MNPKHDIY-IHLGLDEADESLQAFIDRKIEEYRA----RAERI---------NPHAPEDIVDEYVVAMILNDLTK--DM- 63 (106) Q Consensus 1 mnpkhdi~-i~l~~de~~~s~~afi~~kieey~~----raeri---------np~ap~~i~deyv~a~il~~~~~--d~- 63 (106) |+|--++- ++.+.-.+++.+++-+..-|+.-.. ++.+. .+...+-.+.--+++||..+++. |. T Consensus 1 m~~fATv~Dv~~rwr~Lt~dE~~ra~~LL~dAS~~iR~~~p~~g~~~~~~~~~~~~~~~~~k~V~~~mV~Ral~~~~d~~ 80 (140) T protein:vir:97 1 MGNFATTDDVILLWRPLSVDELKRANALLKVVSDTLRMEADKVGKDLDKTMVDKPYFVNVIKSVTVDIVARTLMTSTQGE 80 (140) T ss_pred CCcCCCHHHHHHHhcCCCHhHHHHHHHHHHHHHHHHHHhhhhccCCcchhcccCccchhHHHHHHHHHHHHHhcCCCCCC Confidence 88754321 1122236666655443333333221 11111 11111223345567788888863 32 Q ss_pred -----cccCcee--eeeeCc---hhHHHHHhhhhhhhccceeecCcccCCCCC Q lcl|Aclame:pro 64 -----NFTDGRF--SITEQA---EDVRRRLSHALLRLQGMRIWRPRDDGDEED 106 (106) Q Consensus 64 -----~fsdgrf--sit~~~---~~~~~r~~~allrlqg~riwrpr~dgdeed 106 (106) |.|.|-| |.|..- .-.+-.=--++|++-|.|+|----.|..+- T Consensus 81 G~tq~S~TaG~ys~S~T~~np~G~lylt~~e~~~LGl~~~r~~~i~~~g~~~~ 133 (140) T protein:vir:97 81 PMSQESQSALGYTWSGTYLVPGGGLFIKDNELKRLGLKKQRYGGIELYGEIKR 133 (140) T ss_pred cceeeeeeccchhheeeeecCCCCceeChHHHHHhCCCCCceeeecccCcccc Confidence 6789999 455443 112222344567888888887666665443 No 7 >protein:vir:99517 Length: 124 # NCBI annotation: putative protein # Family: family:all:372 # MgeID: mge:1559 # MgeName: Lj928 # Cross-refs: genbank:acc:NP_958539;genbank:gi:41179321;genbank:GeneID:2717155 Probab=2.99 E-value=22 Score=13.20 Aligned_cols=105 Identities=17% Similarity=0.181 Sum_probs=49.9 Q ss_pred CCCCcceEEEecc--cccchhHHHHHhhhhHHhhhhhhccC--CCCchhhhHHHHHHHHHHHHhhhc-cccCceeeeeeC Q lcl|Aclame:pro 1 MNPKHDIYIHLGL--DEADESLQAFIDRKIEEYRARAERIN--PHAPEDIVDEYVVAMILNDLTKDM-NFTDGRFSITEQ 75 (106) Q Consensus 1 mnpkhdi~i~l~~--de~~~s~~afi~~kieey~~raerin--p~ap~~i~deyv~a~il~~~~~d~-~fsdgrfsit~~ 75 (106) |.--.+|.+-||. +..++-++.+|++-.+...++--+.. |..-+.|+-|-++++.=.--..-| |-|-+=.|+|.. T Consensus 6 ~~~Le~vK~~LgI~d~~~D~lL~~lI~~a~~~i~~~l~~~e~iP~~L~~Iv~evavkryNR~g~EG~~S~SeeG~S~sf~ 85 (124) T protein:vir:99 6 DDQLKKLKTALQLTDTKHDDLLKLYLEDATDFLKLRLSITGVIPTEMLAIVRGAAVKKFNRFKNEGMASYSQDGESITFA 85 (124) T ss_pred HHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHhcCCcccchhHHHHHHHHHHHHHhcccCCcccceeeeCceeeeec Confidence 3333455555664 33466677777776666666543322 555566666666665422111122 566677788776 Q ss_pred c------hhHHHHHhhhhhhhccceeecC---cccCCCC Q lcl|Aclame:pro 76 A------EDVRRRLSHALLRLQGMRIWRP---RDDGDEE 105 (106) Q Consensus 76 ~------~~~~~r~~~allrlqg~riwrp---r~dgdee 105 (106) . .+.+++++..--+..-.|.--| |++|-.. T Consensus 86 d~d~~~y~~~L~~y~~~~~~~g~~~fi~~~~~~~~~~~~ 124 (124) T protein:vir:99 86 SSDFDEWEDEINQWRKDHTGMNKGMWVNPYEIRQNGRAN 124 (124) T ss_pred ccChhhHHHHHHHHhhccCcCCceeeecCccccCCCCCC Confidence 4 2333333322221111111111 3333333 No 8 >protein:vir:108295 Length: 711 # NCBI annotation: hypothetical protein # Family: family:all:487 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552284;genbank:gi:160700609;genbank:GeneID:5758811 Probab=2.61 E-value=15 Score=14.19 Aligned_cols=86 Identities=15% Similarity=0.235 Sum_probs=36.3 Q ss_pred CCCCcceEEEecccccchhHHHHHhhhhHHhhhhhhccCCCCchhhhHHHHHHH--------------HHHHHhhhcccc Q lcl|Aclame:pro 1 MNPKHDIYIHLGLDEADESLQAFIDRKIEEYRARAERINPHAPEDIVDEYVVAM--------------ILNDLTKDMNFT 66 (106) Q Consensus 1 mnpkhdi~i~l~~de~~~s~~afi~~kieey~~raerinp~ap~~i~deyv~a~--------------il~~~~~d~~fs 66 (106) |.-|. -...|++.-+|+++..|-.-++.. +++.- -...+.+|+.|- T Consensus 1 ~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~a~~d~~fy 60 (711) T protein:vir:10 1 MAKKQ------------------KKSRVEQLYAKKAKVYAKNNDDDR--ALLATARERARDGATYWKDNWEAAEDDLKFL 60 (711) T ss_pred CCccc------------------ccccccchhHHHHHhcccCcchHH--HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh Confidence 11110 011255555667776666554432 22221 123456888999 Q ss_pred Cce-ee--------eeeCchhHHHHHhhhhhhhcccee-------ecCcc-------------------cCCCCC Q lcl|Aclame:pro 67 DGR-FS--------ITEQAEDVRRRLSHALLRLQGMRI-------WRPRD-------------------DGDEED 106 (106) Q Consensus 67 dgr-fs--------it~~~~~~~~r~~~allrlqg~ri-------wrpr~-------------------dgdeed 106 (106) +|. ++ ..-||--+..+++-.+..+.|.-+ -+||+ +|+++| T Consensus 61 ~G~Qw~~~~~~~l~~~g~p~~~~N~i~~~v~~v~g~~~~nr~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~d 135 (711) T protein:vir:10 61 GGEQWPSQVRTERELEQRPCLVNNVLPTFVDQVLGDQRQNRPAIKVSSTEVTRVPDAESGEDTTLKISNVAGKND 135 (711) T ss_pred CCCCCCHHHHHHHHhcCCCcEEEcchHHHHHHHhhhHhhCCcceEEecccccchhhhhhhhccccccccCCChhH Confidence 996 10 001110011111222222333221 47876 456666 No 9 >protein:vir:81069 Length: 115 # NCBI annotation: p10 # Family: family:all:363 # MgeID: mge:1889 # MgeName: Xop411 # Cross-refs: genbank:acc:YP_001285680;genbank:gi:148727188;genbank:GeneID:5247114 Probab=1.45 E-value=35 Score=12.08 Aligned_cols=87 Identities=15% Similarity=0.161 Sum_probs=32.5 Q ss_pred CCCCcceEEEecccc----c-chhHHHHHhh---hhHHhhhhh------h--------ccCCC---CchhhhHHHHHHHH Q lcl|Aclame:pro 1 MNPKHDIYIHLGLDE----A-DESLQAFIDR---KIEEYRARA------E--------RINPH---APEDIVDEYVVAMI 55 (106) Q Consensus 1 mnpkhdi~i~l~~de----~-~~s~~afi~~---kieey~~ra------e--------rinp~---ap~~i~deyv~a~i 55 (106) |=.-..+.-||+.|. . |..++.+|.- .+|.|.-|. + ...|. .|+.|+ .|+. T Consensus 1 ivtLee~K~HlRid~dd~deDD~li~~~i~AA~~~v~~~l~r~l~~~~~~~~~~~~~~~~~~~~~~~p~~i~----~AiL 76 (115) T protein:vir:81 1 MITLAMVQRHLQAELYEDDERDYVMQQLLPAARESAELFINRKLYDTQADMLADQAAGVDPAGQLLITRTVE----QAIL 76 (115) T ss_pred CCCHHHHHHHcCCCCCCCccchHHHHHHHHHHHHHHHHHhCCccccccccccccccccCCCCcccccCHHHH----HHHH Confidence 433333444555432 1 2223333321 223332221 1 11111 233332 2222 Q ss_pred H--HHHhhhc-cccCceeeeeeCchhHHHHHhhhhhhhccce Q lcl|Aclame:pro 56 L--NDLTKDM-NFTDGRFSITEQAEDVRRRLSHALLRLQGMR 94 (106) Q Consensus 56 l--~~~~~d~-~fsdgrfsit~~~~~~~~r~~~allrlqg~r 94 (106) | ..+-..= .-++| ++++-|-.+ ++|-.-.-+.-|+| T Consensus 77 llvg~~Y~NRE~v~~~--~~~elP~~~-~~LL~pyR~~~g~~ 115 (115) T protein:vir:81 77 LTLGEWYSSREQVWTK--GAGLVTSSA-QNLLHPYRKFAGVR 115 (115) T ss_pred HHHHHHHhccchhcch--hhhhcCHHH-HHHHHHHHhhcCCC Confidence 1 1221111 34445 455555443 55555555667777 No 10 >protein:vir:97069 Length: 115 # NCBI annotation: hypothetical protein # Family: family:all:363 # MgeID: mge:1653 # MgeName: OP1 # Cross-refs: genbank:acc:YP_453566;genbank:gi:84662601;genbank:GeneID:5142484 Probab=1.44 E-value=46 Score=11.46 Aligned_cols=91 Identities=14% Similarity=0.177 Sum_probs=38.2 Q ss_pred CCCCcceEEEecccccch-----hHHHHHhh---hhHHhhhhh-----------hccCCCCchhh-hHHHHHHHHHH--- Q lcl|Aclame:pro 1 MNPKHDIYIHLGLDEADE-----SLQAFIDR---KIEEYRARA-----------ERINPHAPEDI-VDEYVVAMILN--- 57 (106) Q Consensus 1 mnpkhdi~i~l~~de~~~-----s~~afi~~---kieey~~ra-----------erinp~ap~~i-~deyv~a~il~--- 57 (106) |=.-..+.-|||.|.-++ -++.+|.- .+|.|.-|. +...+..|+.+ +..=|-..||. T Consensus 1 mvtLee~K~hLRid~d~~d~DDali~~~i~AA~~~v~~~l~r~l~~~~~~~~~~~~~~~~~~~~~~~p~~i~~AiLllvg 80 (115) T protein:vir:97 1 MITLAMMQRHLQAELYEDDERDYVMQQLLPAARESAELFLNRKLYDVQADMLADQVLGVDPSDQLLITRTVEQAILLTVG 80 (115) T ss_pred CCCHHHHHHHcCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCcccchhhcccccccccCCCcccccCCHHHHHHHHHHHH Confidence 555556666777664322 23444432 344454432 11122222111 11112222222 Q ss_pred HHhhhc-cccCceeeeeeCchhHHHHHhhhhhhhccce Q lcl|Aclame:pro 58 DLTKDM-NFTDGRFSITEQAEDVRRRLSHALLRLQGMR 94 (106) Q Consensus 58 ~~~~d~-~fsdgrfsit~~~~~~~~r~~~allrlqg~r 94 (106) .+-..= .-++| ++++-|-.+ ++|-.-.-+.-|.| T Consensus 81 ~~Y~NRE~v~~~--~~~elP~~~-~~LL~pyR~~~Gv~ 115 (115) T protein:vir:97 81 EWYSSREQVWIK--GAGLVTSSA-QNLLHPYRKFAGVR 115 (115) T ss_pred HHHhcccccccc--cccccCHHH-HHHHHHHHhhcCCC Confidence 221111 33444 555555444 55555555667887 Done!