Query lcl|Aclame:protein:vir:2203|NCBI_annot:tail tubular protein B|genbank:acc:NP_042000;swissprot:sw:p03747;genbank:gi:9627472;uniprot:P03747;genbank:GeneID:1261024 Match_columns 794 No_of_seqs 149 out of 248 Neff 8.3 Searched_HMMs 1612 Date Fri Nov 29 19:32:12 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_47 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_47_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:2203 Length: 794 # 100.0 2E-256 1E-259 1422.8 93.1 794 1-794 1-794 (794) 2 protein:vir:10452 Length: 794 100.0 4E-255 3E-258 1415.0 90.7 794 1-794 1-794 (794) 3 protein:vir:99677 Length: 794 100.0 6E-248 4E-251 1376.1 89.3 792 1-794 1-794 (794) 4 protein:vir:1543 Length: 801 # 100.0 4E-245 2E-248 1360.7 88.5 792 1-794 1-801 (801) 5 protein:vir:94583 Length: 792 100.0 2E-244 1E-247 1356.3 90.0 789 1-794 1-792 (792) 6 protein:vir:3366 Length: 801 # 100.0 2E-243 1E-246 1350.8 88.5 792 1-794 1-801 (801) 7 protein:vir:94713 Length: 785 100.0 6E-241 4E-244 1337.7 89.8 783 1-794 1-785 (785) 8 protein:vir:8887 Length: 808 # 100.0 3E-234 2E-237 1301.1 87.3 787 1-794 1-808 (808) 9 protein:vir:97014 Length: 800 100.0 5E-221 3E-224 1228.2 85.3 769 2-794 1-800 (800) 10 protein:vir:105647 Length: 800 100.0 9E-220 5E-223 1221.6 83.6 778 2-794 1-800 (800) 11 protein:vir:7021 Length: 803 # 100.0 2E-219 1E-222 1219.8 85.2 777 2-794 1-803 (803) 12 protein:vir:103341 Length: 806 100.0 3E-216 2E-219 1202.5 85.6 774 2-794 1-806 (806) 13 protein:vir:80253 Length: 777 100.0 5E-214 3E-217 1189.8 86.0 765 1-794 1-777 (777) 14 protein:vir:6326 Length: 826 # 100.0 3E-213 2E-216 1185.5 86.3 769 1-794 1-826 (826) 15 protein:vir:100022 Length: 976 100.0 1E-210 7E-214 1171.8 82.2 773 1-794 1-976 (976) 16 protein:vir:78957 Length: 826 100.0 8E-210 5E-213 1166.8 85.3 771 1-794 1-826 (826) 17 protein:vir:78703 Length: 905 100.0 7E-206 5E-209 1145.2 83.9 767 1-794 1-905 (905) 18 protein:vir:103790 Length: 768 100.0 3E-174 2E-177 972.2 75.7 732 1-791 1-768 (768) 19 protein:vir:95324 Length: 823 100.0 2E-161 1E-164 901.3 71.9 719 1-790 1-823 (823) 20 protein:vir:98487 Length: 681 100.0 2E-159 1E-162 891.1 69.3 666 1-789 1-681 (681) 21 protein:vir:107802 Length: 681 100.0 2E-159 1E-162 891.1 69.3 666 1-789 1-681 (681) 22 protein:vir:107423 Length: 681 100.0 2E-159 1E-162 891.1 69.3 666 1-789 1-681 (681) 23 protein:vir:1778 Length: 680 # 100.0 1E-160 8E-164 897.2 55.9 540 1-550 1-680 (680) 24 protein:vir:7329 Length: 825 # 100.0 6E-158 4E-161 882.5 68.8 712 1-790 1-825 (825) 25 protein:vir:102644 Length: 594 100.0 2E-135 1E-138 759.1 60.3 562 1-790 1-594 (594) 26 protein:vir:94602 Length: 1012 99.7 8.7E-15 5.4E-18 97.7 38.7 762 1-794 1-1009(1012) 27 protein:vir:80177 Length: 1027 99.4 2.6E-12 1.6E-15 84.1 29.9 726 1-794 1-936 (1027) 28 protein:vir:2625 Length: 715 # 99.0 4.4E-09 2.7E-12 66.4 41.8 634 1-791 1-715 (715) 29 protein:vir:3133 Length: 911 # 98.2 3.5E-06 2.2E-09 50.5 36.3 668 1-794 1-839 (911) 30 protein:vir:8837 Length: 513 # 97.8 1.6E-05 9.9E-09 46.9 37.9 483 1-793 1-513 (513) 31 protein:vir:105563 Length: 396 97.0 0.00024 1.5E-07 40.4 20.3 375 1-530 1-396 (396) 32 protein:vir:95475 Length: 771 96.0 0.0011 6.7E-07 36.8 43.1 661 1-791 1-771 (771) 33 protein:vir:108312 Length: 458 88.5 0.032 2E-05 28.8 31.1 440 151-786 1-458 (458) No 1 >protein:vir:2203 Length: 794 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_042000;swissprot:sw:p03747;genbank:gi:9627472;uniprot:P03747;genbank:GeneID:1261024 Probab=100.00 E-value=1.7e-256 Score=1422.76 Aligned_cols=794 Identities=100% Similarity=1.524 Sum_probs=777.1 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~~y~l~ 80 (794) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++|+++..+..+.+|++|+|+++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GvSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~~~y~l~ 80 (794) T protein:vir:22 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) T ss_pred CceeeeecchhhcccccCCchHHhhhHHhhhhcceeeccCCceeCCchHhhhhhcccCCCCCccEEEEEEeCCCcEEEEE Confidence 99999999999999999999999999999999999999999999999999999998887778889999999999999999 Q ss_pred EeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecCCc Q lcl|Aclame:pro 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) |++++||||+++|.++.|..+++.+|+.++++..+|+++|++|+|||+|++++|+++.++.+..+|++.+++++++++++ T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~~~~~~p~~~~~~~~~~~~~~~~~g~v~v~~g~ 160 (794) T protein:vir:22 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) T ss_pred EcCCeEEEEecCCcEEEeecCCCccceecCCCcccEEEEEEcCEEEEEcCCeeeeEeeccccCCCCCCCceEEEEccCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcccccceeEEECCceEEEEECCCCccceeEeecccC Q lcl|Aclame:pro 161 YGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQIDSFTTKDGYA 240 (794) Q Consensus 161 y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~tv~~~~~~~~v~~~~~~~~~~~~~~dg~~ 240 (794) |+++|++++++...+++++|+++.......++++||+.+|..++++...+|++..++++++++++++..+++.++.+|++ T Consensus 161 y~~ty~v~I~~~~~a~~~~p~gt~~~~~~~~~~~~ia~~L~~~l~~~~~~~t~~~~~~~~~i~a~~~~~~~~~t~~~g~~ 240 (794) T protein:vir:22 161 YGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQIDSFTTKDGYA 240 (794) T ss_pred cceeEEEEeccCcceEEEEcCCCccccceeechhhhhhhhhhhheeccccceEEeCCceEEEEEcCCceEEEEeeecccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEEEEEecCCce Q lcl|Aclame:pro 241 DQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVRAADGNF 320 (794) Q Consensus 241 ~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~~~~~t~ 320 (794) ++.+..+.++++++++||+.|++|++++|++++++..++||++|+..+++|+||++|+..++++.+||||.|+++++++| T Consensus 241 ~t~~~~~~~~~~~~~~lp~~~~~G~~v~i~~~~~~~~~~Y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~~~~~~~ 320 (794) T protein:vir:22 241 DQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVRAADGNF 320 (794) T ss_pred cceeEEEEeccccceeccccCCCCeEEEEEeCCCCCcceeEEEEeccceEEEEeeeccceeeecccceeeEeeeccCCcE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeeccccccccCCcccccCchhcCCCceEEEEEccceeeecCCeEEEEccCCcccccccccccCCCCCcEEEEEcCCcc Q lcl|Aclame:pro 321 DFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRI 400 (794) Q Consensus 321 ~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i~~~~~s~~~ 400 (794) ++++.+|++|.+||+++||+|||+|++|++|+||||||+|++|++|||||+||||||+++|++++.|||||+++++++++ T Consensus 321 ~~~~~~w~~r~~Gd~~tnp~psf~g~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i~~~~ss~~~ 400 (794) T protein:vir:22 321 DFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRI 400 (794) T ss_pred EEeeccccccccCccccCCcceecCCCcceEEEEcceEEEecCCeEEEEccCCccccccccCcCCCCCccEEEEecCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeccc Q lcl|Aclame:pro 401 AILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVS 480 (794) Q Consensus 401 ~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~~~~~~~~~~ 480 (794) ++|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|++++|+|++|+|++++||+++++.. T Consensus 401 ~~i~~~v~~~~~L~i~t~~~e~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~r~~~~~~~~ 480 (794) T protein:vir:22 401 AILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVS 480 (794) T ss_pred eeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEeeccCCCCceEeCCeEEEEecCCCeeEEEEeEeeeccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCCeEEEEEEEcCCE Q lcl|Aclame:pro 481 SVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSD 560 (794) Q Consensus 481 ~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d~ 560 (794) ++|++.|||+|++|||+|+++.+++++++|.+++|+++++|+|++|+|||+++||+|+|||||+|+|.++++|+...+|+ T Consensus 481 d~y~~~Dlt~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g~~~~~~~~~~~d~ 560 (794) T protein:vir:22 481 SVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSD 560 (794) T ss_pred CceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceeEEeeEEEEcCCCEEEEEEEecCCE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999 Q ss_pred EEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcccceEEEEEecCCce Q lcl|Aclame:pro 561 MYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKITVLEPDGKI 640 (794) Q Consensus 561 ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~~~~~~v~~~~~g~~ 640 (794) ||++|+|+++++++||.|.+++.++.++++.+||||++++..++++|+++++.+++.+|..+|++|++++++.+++||.+ T Consensus 561 l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~g~~~~~~~~t~~~~~~~~g~~~~~g~~v~~~~dg~~ 640 (794) T protein:vir:22 561 MYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKITVLEPDGKI 640 (794) T ss_pred EEEEEEeCCCEEEEEEEEeeccccCCCccceeeeeeeEEEeeccceeecCCcceEEEcccccCcccccceEEEEEcCCce Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEEeeccceEEEEE Q lcl|Aclame:pro 641 TVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGTFDIYV 720 (794) Q Consensus 641 ~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~~tg~~~~~v 720 (794) .....++.++++.++++|++++++++|+|||+|+++++++||++++++|+++.+.+..+|+||||++++|.++|.|.++| T Consensus 641 ~~~~~~~~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~~~~~~~~~~~grl~l~r~~~~~~~tg~~~v~v 720 (794) T protein:vir:22 641 TVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGTFDIYV 720 (794) T ss_pred eeceeeeeeeeccceEEeCCCCCCcEEEEeeeeeEEEEecceEEEecCCCccceeeecceEEEEEEEEEeccccceEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccCCCcceeeecCceecccccccCccccccceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 721 ENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRSSGI 794 (794) Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r~rrv 794 (794) ++.+++..+.+.+.+++++.+..+.+++.++.++||+.+|+++.+|+|+|++|+||+|++|+|||+||+|+||| T Consensus 721 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~~~~~~~~~v~i~~d~p~P~tvlsi~~eg~y~~r~~~v 794 (794) T protein:vir:22 721 ENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRSSGI 794 (794) T ss_pred cCCCcccceeecCceecccccccCcccccCceEEEEecccCceEEEEEEECCCCCEEEEEEeEEEEEeccccCC Confidence 99988888889999999999999999999999999999999999999999999999999999999999999999 No 2 >protein:vir:10452 Length: 794 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848299;genbank:gi:30387490;genbank:GeneID:1733952 Probab=100.00 E-value=4.4e-255 Score=1415.05 Aligned_cols=794 Identities=96% Similarity=1.487 Sum_probs=770.8 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~~y~l~ 80 (794) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++|+++..+....+++.+++++.|+|+++ T Consensus 1 M~~i~~s~~n~~~GvSqq~D~~Ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~rd~~e~~~v~ 80 (794) T protein:vir:10 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTLGDNGALGQAPYIHLINRDENEQYYAV 80 (794) T ss_pred CcceeeecchhhcccccCCchHHhhhhHhhhhcceeeeccCcccCcchhhheeccCCCccccceeeeEEecCCCceEEEE Confidence 99999999999999999999999999999999999999999999999999999998776666666777788999999999 Q ss_pred EeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecCCc Q lcl|Aclame:pro 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) |++++||||+++|.++.|..+++.+|+.++++.++|+++|+||+|||+|++++|++..+.......++..++++.+++++ T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~~~Y~~aa~~~~~l~~~q~aD~~fivn~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) T protein:vir:10 81 FTGTGIRVFDLAGNEKQVRYPNGSNYIKTANPRSDLRMVTVADYTFIVNRNVVVQKDPNSVNLANYNPKQDGLINIRGGQ 160 (794) T ss_pred EeCCeEEEEEcCCcEEEEEcCCCCcceecCCCcceEEEEEEcCEEEEEcCCeeeeeeccccccCCCCCCccEEEEecccc Confidence 99999999999999999999999999999999999999999999999999999999888877777788889999999999 Q ss_pred CCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcccccceeEEECCceEEEEECCCCccceeEeecccC Q lcl|Aclame:pro 161 YGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQIDSFTTKDGYA 240 (794) Q Consensus 161 y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~tv~~~~~~~~v~~~~~~~~~~~~~~dg~~ 240 (794) |+++|++++++.+.+++++|+++.++.+.+++.+|++.+|.+.+++..++|++..+++++++++++++.+.+.++.+++. T Consensus 161 y~r~y~i~i~~~~~at~~tpdgt~~~~~~~~s~~~ia~~L~~~l~a~~~g~t~~~~g~~i~i~a~s~~~~~t~s~~~~~~ 240 (794) T protein:vir:10 161 YGRELIVHINGKDVATYKIPDGSKPEHVNNTDAQWLAERLAKQMRINLSGWTVNVGQGFIHVTAPSGQQIDSFTTKDGYA 240 (794) T ss_pred cceEEEeccCCcceeEEEecCCCCcccceecchhhhhhhhhhhhhcccCCceEEeCCeEEEEEeccCceeccccccCCcC Confidence 99999999999999999999999999999999999999999999999999999999999999999999998999999999 Q ss_pred cceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEEEEEecCCce Q lcl|Aclame:pro 241 DQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVRAADGNF 320 (794) Q Consensus 241 ~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~~~~~t~ 320 (794) ++.+..+.++++.+++||+.|++|++|+|.++++++.++|||+|+..+++|+||++|+..++++.+||||+|+++++++| T Consensus 241 ~~~~~~v~~~~~~~~~lp~~~~~G~~v~i~~~~~~~~~~yyv~~~~~~~~w~E~~~~g~~~~~~~~tmP~~l~r~~~~t~ 320 (794) T protein:vir:10 241 DQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTENQVLLETMPHALVRAADGNF 320 (794) T ss_pred cceeEEEEeccCcceecccCCCCCcEEEEEeCCCCCcceeEEEEEcCCcEEEEecccceeEEEecccceeEEEEeccceE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeeccccccccCCcccccCchhcCCCceEEEEEccceeeecCCeEEEEccCCcccccccccccCCCCCcEEEEEcCCcc Q lcl|Aclame:pro 321 DFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRI 400 (794) Q Consensus 321 ~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i~~~~~s~~~ 400 (794) +++..+|++|.+||+++||+|||+|++|++|+||||||+|++|++|||||+||||||+++|++++.|||||+++++++++ T Consensus 321 ~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~~ 400 (794) T protein:vir:10 321 DFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSNDDPIDVAVSTNRI 400 (794) T ss_pred EeeecccccccccccccCccCcccCCCccEEEEEcceEEEeeCCeEEEEecCCcccccccccccCCCCccEEEEecCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeccc Q lcl|Aclame:pro 401 AILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVS 480 (794) Q Consensus 401 ~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~~~~~~~~~~ 480 (794) ++|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.|+|+.+|++++|+|++|+|++++||+++++.+ T Consensus 401 ~~i~~~v~~~~~L~i~T~~~q~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~r~~~~~~~~ 480 (794) T protein:vir:10 401 AILKYAVPFSEELLIWSDEAQFVLTASGTLTSRSVELNLTTQFDVQDRARPYGIGRNVYFASPRSSYTSIHRYYAVQDVS 480 (794) T ss_pred eeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCeeEEEEEeeecccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCCeEEEEEEEcCCE Q lcl|Aclame:pro 481 SVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSD 560 (794) Q Consensus 481 ~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d~ 560 (794) ++|.+.|||+|++|||+++++.++++++++.+++|+++++|+|++|+|||+++||+|+|||||+|+|.++++|+...+|+ T Consensus 481 d~y~a~Dlt~~~~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g~~~~~~~~~~~d~ 560 (794) T protein:vir:10 481 SVKNSEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSD 560 (794) T ss_pred CceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeEEEEEcCCcEEEEEEEecCCe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999 Q ss_pred EEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcccceEEEEEecCCce Q lcl|Aclame:pro 561 MYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKITVLEPDGKI 640 (794) Q Consensus 561 ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~~~~~~v~~~~~g~~ 640 (794) ||++|+|+++++++||.|.+++.++.++++++||||+++|..++++|+++++.+++.+|+++|++|+||++|.+.+||.. T Consensus 561 l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~g~~~~eg~~v~~~adg~~ 640 (794) T protein:vir:10 561 MYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKITVLEPDGKI 640 (794) T ss_pred EEEEEEeCCCEEEEEEEEeecCCCCCCccceeeeecceEEEecCcccccccccceEEcccccCcccccccEEEEecCCce Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEEeeccceEEEEE Q lcl|Aclame:pro 641 TVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGTFDIYV 720 (794) Q Consensus 641 ~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~~tg~~~~~v 720 (794) .....++.++++.++++|++++++++|+|||+|+++++++||++++++|+++.+....+|+||||+++++.+||.|.++| T Consensus 641 ~~~~~~~~~~~g~~~l~i~~~~~a~~v~vGl~y~s~~~~~~~~i~~~~~~~~~~~~~~gr~~l~r~~~~~~~tg~~~v~v 720 (794) T protein:vir:10 641 TVFEQPTSGWQSDPWLRLSGNLEGREVFIGFNINFVYEFSKFLIKQTTDDGSTSTEDIGRLQLRRAWVNYEDSGTFDIYV 720 (794) T ss_pred eeeeeeeeeeecceEEEecCCCCCceEEEeeeeeEEEEecceEEEccCCCcceeeeccccEEEEEEEEEeeccccEEEEE Confidence 88888888888889999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccCCCcceeeecCceecccccccCccccccceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 721 ENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRSSGI 794 (794) Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r~rrv 794 (794) ++++++..+.+.+.++++..+..+.+++.+|+++||+.+|+++.+|+|+|++|+||+|+||+|||+||+|+||| T Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvlsi~~eg~y~~r~~~v 794 (794) T protein:vir:10 721 ENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRSSGI 794 (794) T ss_pred cCCccccceeeccceeccccccccccccccceEEEEecccCceEEEEEEECCCCceEEEEEEEEEEEeccccCC Confidence 99988877889999999999999999999999999999999999999999999999999999999999999999 No 3 >protein:vir:99677 Length: 794 # NCBI annotation: Tail tubular protein B # Family: family:all:825 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249591;genbank:gi:68299742;genbank:GeneID:3799992 Probab=100.00 E-value=5.7e-248 Score=1376.06 Aligned_cols=792 Identities=53% Similarity=0.930 Sum_probs=761.2 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~~y~l~ 80 (794) ||+|+|+||||++|||||+|++||++||++|+||+++|+||++||||++||++|+++..++.++|||||+|+++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GvS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~f~~~~~~~y~l~ 80 (794) T protein:vir:99 1 MALISQSIKNLKGGISQQPDILRYSDQGSKQINGFSSEVEGLQKRPPSVHIKRLTDQFGLGQKPYCHIINRDEVERYAVF 80 (794) T ss_pred CceeeeecchhhcceecCCchHHhhhhHhhhhcceeeeccCcccCCccceeeeecCCCCCccccEEEEEEeCCCceEEEE Confidence 99999999999999999999999999999999999999999999999999999999888888999999999999999999 Q ss_pred EeCCceEEEEc-CCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecCC Q lcl|Aclame:pro 81 FTGSGIRVFDL-SGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGG 159 (794) Q Consensus 81 ~~~~~~rv~~~-~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g 159 (794) |++++||||+. +|..++|..+.+.+|+.++.+..+|+++|++|+|||+|++++|+++.............++++.++++ T Consensus 81 f~~~~irv~~~~~g~~~~v~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g 160 (794) T protein:vir:99 81 FTGSNIRVFDLFTGDEKTVNAPNGLSYVSSSNPRKDLRMVTVADYTFILNRNVATAQGTTNTPSGLAPFGHFGLVVIRGG 160 (794) T ss_pred EcCCeEEEEECCCCeEEEeeccccccccccCCccceeeEEEEccEEEEEcCCeeeeEeeeeccccCcCCCceEEEEeccC Confidence 99999999986 78999999999999999999999999999999999999999999987766666677888999999999 Q ss_pred cCCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcccccceeEEECCceEEEEECCCCccceeEeeccc Q lcl|Aclame:pro 160 QYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQIDSFTTKDGY 239 (794) Q Consensus 160 ~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~tv~~~~~~~~v~~~~~~~~~~~~~~dg~ 239 (794) +|+++|++++++..++++++|+++........+++|++.+|...+. ..+|++..+++++++.++++..+.+.++++|+ T Consensus 161 ~y~~~y~v~i~gs~ta~~~tp~~~~~~~~~~~s~~~ia~~l~~~l~--~~g~~v~~~~g~~~i~~~~~~~v~t~s~~~g~ 238 (794) T protein:vir:99 161 QYGRTYRIKVNGSVEASFETPLGDQVAHAKQIDIAYIIDQLAAGLI--NKGWAVTKGSGYFYFSKSGSVIINSLEVEDGY 238 (794) T ss_pred CCCceEEEEecCCcccceeeccCcccccccccchhhhhhhhHhhhh--cccceEEeCCeEEEEEecCCceeEEEEeecCC Confidence 9999999999999999999999998888889999999999998775 46899999999999999999999999999999 Q ss_pred CcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEEEEEecCCc Q lcl|Aclame:pro 240 ADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVRAADGN 319 (794) Q Consensus 240 ~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~~~~~t 319 (794) +++.++.+.++++++++||+.|++|++|+|.++++.+.++||++|+..+++|+||++++..++++++||||+++++++++ T Consensus 239 ~~t~~~~~~~~v~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p~~~v~~~~~~ 318 (794) T protein:vir:99 239 NGQLAWGIINDVQKTTQLPVYAPNNYIIRVSGDPTLNQDDYYVRFDASRNVWTECPAPNIKADYNKATMPHVLIREADGT 318 (794) T ss_pred CCceeeEEeeeccceeecccCCCCCeEEEEeccCCCCCCceEEEEEcCCceEEeeccceeecceeccceEEEEeccCCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eEEeeccccccccCCcccccCchhcCCCceEEEEEccceeeecCCeEEEEccCCcccccccccccCCCCCcEEEEEcCCc Q lcl|Aclame:pro 320 FDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNR 399 (794) Q Consensus 320 ~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i~~~~~s~~ 399 (794) |++++.+|++|.+||+++||+|||+|++|++|+||||||+|+++++|||||+||||||+++|+.++.|||||++++++++ T Consensus 319 ~~~~~~~w~~r~~Gd~~tnp~psf~g~~is~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~~~~~ 398 (794) T protein:vir:99 319 FTFKQADWTHRAAGDDETNPYPSFIGNSINDIFFFRNRLGFLSGENVILSGSGNYFNFFPESVAVLTDTDPIDVAVSTNR 398 (794) T ss_pred eeEeeccccccccCCcccCCCccccCcceeEEEEEeeeEEEecCCeEEEEecCCccccccccccCCCCCccEEEEecCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeecc Q lcl|Aclame:pro 400 IAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDV 479 (794) Q Consensus 400 ~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~~~~~~~~~ 479 (794) +++|+|+++++++|+|||+++||+|+|+++|||+|++++++|+|+|++.|+|+.+|++++|+|++|+|++++||+.+++. T Consensus 399 ~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~r~~~~~~~ 478 (794) T protein:vir:99 399 ISILKYAVPFSEELILWSDQAQFVLSSDGGLTPTTIRLDLTTEFEVTEQARPYGIGRGVYFVSPRAKFSSVRRFYAVQDV 478 (794) T ss_pred ceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEeeccCCCCceEeCCeEEEEecCCCeeEEEEeeeeccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988999 Q ss_pred ccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCCeEEEEEEEcCC Q lcl|Aclame:pro 480 SSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISS 559 (794) Q Consensus 480 ~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d 559 (794) +++|.+.|||+|++|||+|+++++++++++|.+++|+++++|+|++|+|||+++||+|+|||||+|+|.++++|+...+| T Consensus 479 ~d~y~a~Dlt~~~~hl~~~~~~~~~a~~~~~~~~v~~~~~~g~l~~~~y~~~~~eq~v~aW~~~~~~g~~~~~~~~~~~d 558 (794) T protein:vir:99 479 TQVKNAEDISAHVPYYVENGVFKMSGSSTENFLTILTEGNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCRVLCCDMIGA 558 (794) T ss_pred cCceehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeEEEEEcCCCeEEEEEEEcCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998999 Q ss_pred EEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcccceEEEEEecCCc Q lcl|Aclame:pro 560 DMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKITVLEPDGK 639 (794) Q Consensus 560 ~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~~~~~~v~~~~~g~ 639 (794) +||++|+|+++++++||.+.+++.+...+++.+||||+++|..+.++++.+...+++.++.++|+.|++|++|.+.+||. T Consensus 559 ~l~~~v~r~~~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~g~~v~~~~dg~ 638 (794) T protein:vir:99 559 VMHLIIDSPSGVLMEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSYNDDDFKTRVKLKDIYGSTPANGQYVFISLGGV 638 (794) T ss_pred EEEEEEEeCCCEEEEEEEeeeCCCCCCCcccceeeeeeeeeeecccccccCcceeEEeccccccccccCCceEEEEeCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eecceeeecccc-ccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEEeeccceEEE Q lcl|Aclame:pro 640 ITVFEQPTAGWN-SDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGTFDI 718 (794) Q Consensus 640 ~~~~~~~~~~~~-~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~~tg~~~~ 718 (794) ......+..+++ ..+.++|||++++++|+|||+|+++++++||++++++++++.++...+|+||||+++++.+||.|.+ T Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~~~g~~~~~~~gr~~l~r~~~~~~~tg~~~v 718 (794) T protein:vir:99 639 TFTFDPPAGGWQANDGLIEFDGDLRGTKFFVGEAYTFLYEFSKFLIKTTDTADGVATEDIGRLQLRRAWVNYDKSGNFRV 718 (794) T ss_pred eeeeecccceEecCccEEEecCCCCCcEEEEeeeeeEEEeecceEEeecCCCCceeeeccceEEEEEEEEEeecccceEE Confidence 877666555443 4467899999999999999999999999999999999888888889999999999999999999999 Q ss_pred EEccCCCcceeeecCceecccccccCccccccceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 719 YVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRSSGI 794 (794) Q Consensus 719 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r~rrv 794 (794) .+++.+++..+.+.+.+++++++..+.+++.+|+++||+.+|+++.+|+|+|++|+||+|+||+|||+||+|+||| T Consensus 719 ~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvlsi~~e~~y~~r~~~v 794 (794) T protein:vir:99 719 EVNNQGRTFTYNMTGNRLSTNELILGDESLDTGQFRYAVSGNATQVTVSLISDTPNPLSIIGGGWEGYYVRRSSGI 794 (794) T ss_pred EECCCccceeeeccccccccccccccccccccceEEEEecccccceEEEEEECCCCCEEEEEEEEEEEEeccccCC Confidence 9999998877888999999999999999999999999999999999999999999999999999999999999999 No 4 >protein:vir:1543 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052111;swissprot:trembl:q9t105;genbank:gi:9634037;uniprot:Q9T105;genbank:GeneID:1262408 Probab=100.00 E-value=3.6e-245 Score=1360.72 Aligned_cols=792 Identities=69% Similarity=1.169 Sum_probs=758.8 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~~y~l~ 80 (794) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++++.......++|+|+|+++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GvSqq~d~~r~~~q~~~~~N~~~~~~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~e~y~l~ 80 (801) T protein:vir:15 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) T ss_pred CceeeeecchhhcceecCcchHhhhhhHhhhhcceeccccCcccCCchheeeeecCCCCcccceeEEEEEeCCceEEEEE Confidence 99999999999999999999999999999999999999999999999999999988776677889999999999999999 Q ss_pred EeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecCCc Q lcl|Aclame:pro 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) |++++||||+++|.++.+... .+|+.++.++++|+++|+||+|||+|++++|+++.+.......+...++++++++++ T Consensus 81 ~~~~~irv~~~~G~~~~v~~~--~~y~~~~~~~~~l~~~~~aD~~fi~nr~~~~~~~~~~~~~~~~~~~~~alv~v~~~~ 158 (801) T protein:vir:15 81 FTGEDIKVFDLDGKEYQVRGD--RSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQ 158 (801) T ss_pred EcCCeEEEEccCCcEEEEecC--CccccccCchhheeEEEEcCEEEEeeCCeeeecccCccccCccCCCCceEEEeeecc Confidence 999999999999988877654 467878888889999999999999999999999988877777788889999999999 Q ss_pred CCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcc---------cccceeEEECCceEEEEECCCCccc Q lcl|Aclame:pro 161 YGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRT---------NLSDWTVNVGQGFIHVTAPSGQQID 231 (794) Q Consensus 161 y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~---------~~~~~tv~~~~~~~~v~~~~~~~~~ 231 (794) |+++|++++++...+.+++++++.+......+..+++..|...+.+ ....|++...++++++.++++.+.. T Consensus 159 yg~t~~I~i~gs~~~~~t~~~gs~~~~~~~~s~~~ia~~l~~~~~~~~p~~~~~~~~~~w~~~~~~g~~~i~a~~~~~~~ 238 (801) T protein:vir:15 159 YGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVW 238 (801) T ss_pred CceeEEEEeCCcceEEEEeccCcccchhhhcceeechHHHhhhhhhccCccceeccCccEEEEecCcEEEEeCCCCcccc Confidence 9999999999999999999999988888888888888887765543 3457889999999999999999888 Q ss_pred eeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEE Q lcl|Aclame:pro 232 SFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHA 311 (794) Q Consensus 232 ~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~ 311 (794) ..++++|++++.+.+..+.++.+++||..+++|++|+|+++.++..++|||+++.+.++|+||++||..++++.+||||. T Consensus 239 ~~~t~dg~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~E~a~~g~~~~~~~~tmp~~ 318 (801) T protein:vir:15 239 GLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWA 318 (801) T ss_pred eeeeccccCceeeeEEeecccceeeeeeecCCCcEEEEEecCCCccceEEEEEEcCCeeEEeecccccceeeeccccceE Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEecCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeeecCCeEEEEccCCcccccccccccCCCCCcE Q lcl|Aclame:pro 312 LVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPI 391 (794) Q Consensus 312 lv~~~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i 391 (794) |++.++++|+++..+|.+|.+||+++||+|||+|++|++|+||||||+|++|++|||||+||||||+++|++++.||||| T Consensus 319 lv~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i 398 (801) T protein:vir:15 319 LVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPI 398 (801) T ss_pred EEeeccceEEEeccccccccCCccccCCcccccCCCceEEEEEcceEEEeeCCeEEEEecCCccccccccccCCCCCccE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEE Q lcl|Aclame:pro 392 DVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIH 471 (794) Q Consensus 392 ~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~ 471 (794) +++++++++++|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|++++|+|++|+|++++ T Consensus 399 ~~~~~~~~~~~i~~~v~~~~~L~i~t~~~q~~ls~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~ 478 (801) T protein:vir:15 399 DVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSIN 478 (801) T ss_pred EEEecCCcceeeEEEeecCCcEEEEecCcEEEEcCCCcccceeEEEEEEEeeeccCCCCceEeCCeEEEEecCCCeeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCCeEE Q lcl|Aclame:pro 472 RYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQV 551 (794) Q Consensus 472 ~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~ 551 (794) ||+++++..++|.+.|||+|+||||++++++++++++++.+++|+++++|+|++|+|||+++||+|+|||||+|+|.+++ T Consensus 479 r~~~~~~~~d~y~a~Dlt~~~~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g~~~~ 558 (801) T protein:vir:15 479 RYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTV 558 (801) T ss_pred EEEeecccccceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEecCCCceEEEeeEEEEcCCCEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcccceEE Q lcl|Aclame:pro 552 LACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKI 631 (794) Q Consensus 552 ~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~~~~~~ 631 (794) +|+...+|+||++|+|+++.+++||.+.+++.+...+++++||||++++..++++|+..+..++++.+.++|++|+||+. T Consensus 559 ~~~~~~~d~l~~~v~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~ 638 (801) T protein:vir:15 559 FAAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRV 638 (801) T ss_pred EEEEecCCEEEEEEEecCcEEEEEEEEccccccCCCcceeeeeeeeeeEeeccceeccCceecccccccccccccccceE Confidence 99988999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEEee Q lcl|Aclame:pro 632 TVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYE 711 (794) Q Consensus 632 v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~ 711 (794) +.+++||.+.....+..|+...+.++|+|++++++|+|||+|+++++++||+++.++|+++.+....+|+|||+++++++ T Consensus 639 v~v~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~r~~~~~~ 718 (801) T protein:vir:15 639 SVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYE 718 (801) T ss_pred EEEEeCCceeeeeeecCcccCcceEEEcCCCCCcEEEEeeeeeEEEEecceEEeccCCCCCceeeeeccEEEEEEEEEec Confidence 99999999999999999998889999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceEEEEEccCCCcceeeecCceecccccccCccccccceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 712 NSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRS 791 (794) Q Consensus 712 ~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r~ 791 (794) +||.|.+.|++.+++..+...+.+++...+..+.|++.++.++||+.+|+++.+|+|+|++|+||+||||+|||+||+|+ T Consensus 719 ~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvlsi~~e~~y~~r~ 798 (801) T protein:vir:15 719 DSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) T ss_pred cCcceEEEECCcccccceeecCcccccccccccccccccceEEEEEeecCceEEEEEEECCCCcEEEEEEEEEEEEeccc Confidence 99999999999999888889999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCC Q lcl|Aclame:pro 792 SGI 794 (794) Q Consensus 792 rrv 794 (794) ||| T Consensus 799 ~~~ 801 (801) T protein:vir:15 799 SGI 801 (801) T ss_pred cCC Confidence 999 No 5 >protein:vir:94583 Length: 792 # NCBI annotation: Tubular tail protein B # Family: family:all:825 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919014;genbank:gi:119637778;genbank:GeneID:5179343 Probab=100.00 E-value=2.3e-244 Score=1356.25 Aligned_cols=789 Identities=65% Similarity=1.110 Sum_probs=748.3 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~~y~l~ 80 (794) ||+|+|+||||++|||||+|++||++||++|+||+|+|+||++||||++||+++++.+.+..+.|||||+|+++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GiSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~q~y~l~ 80 (792) T protein:vir:94 1 MALISQSVKNLKGGISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSAEQYYVV 80 (792) T ss_pred CcceeeecchhhcceecCcchHHhhhhhhhhhcceeeeccccccCChhHHHHhhhcCCCCCcccEEEEEEeCCCceEEEE Confidence 99999999999999999999999999999999999999999999999999999999888888999999999999999999 Q ss_pred EeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecCCc Q lcl|Aclame:pro 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) |+++++|||+.+|.++.+. +..+|+.++.+.++|+++|+||+|||+|++++|+++.+..+..+ ..+++++++++++ T Consensus 81 f~~~~~rv~~~~g~~~~~~--~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~--~~~~~~v~i~~g~ 156 (792) T protein:vir:94 81 FTGQGVRVFDLNGKEYDVK--GDLSYVKVENPRDDLRMVTVADYTFIVNRNMVVRPDTTPLYTLK--ENGDCLINIRGGM 156 (792) T ss_pred EcCCeEEEEecCCceEEec--ccCceeeecCCcceeEEEEEcCEEEEEeCCccceeEecCcCCCC--CCceEEEEccCCC Confidence 9999999999998877654 45789988888899999999999999999999999877766543 4568999999999 Q ss_pred CCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcc--cccceeEEECCceEEEEECCCCccceeEeecc Q lcl|Aclame:pro 161 YGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRT--NLSDWTVNVGQGFIHVTAPSGQQIDSFTTKDG 238 (794) Q Consensus 161 y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~--~~~~~tv~~~~~~~~v~~~~~~~~~~~~~~dg 238 (794) |+++|++++++.. +++++++++.+......+++|++.+|...... ...+|++...+++++++++++..+.+.++++| T Consensus 157 y~~~y~i~i~~~~-~~~~~~~~t~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g 235 (792) T protein:vir:94 157 YGRTLAFTINNTK-IAYEIAHGDAPEHSKQTDAQWLVKKLAGLARLNVAFKGWTFTEGPGYIHVIAPSNSQINSLSTEDG 235 (792) T ss_pred cceeEEEEecCce-eeeeeecCcccceecccchhhhhhhhhhhccccccccccEEEECCeEEEEEecCCceeeeeecccC Confidence 9999999999864 56788998888888888999999999876544 34688999999999999999999989999999 Q ss_pred cCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEEEEEecCC Q lcl|Aclame:pro 239 YADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVRAADG 318 (794) Q Consensus 239 ~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~~~~~ 318 (794) +.++.+..+.+.++..++||+.|++|++|+|++.++++.|+||++|+..+++|+||+++++.++++.+||||++++++++ T Consensus 236 ~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~i~~~~~~~~d~y~v~~~~~~~~w~E~~~~~~~~~~~~~tmp~~lv~~~~~ 315 (792) T protein:vir:94 236 YADQLMNAVMHTSQSFSRLPVEAPNGYTVKIVGDTSKTSDMFYVQYDNMKKVWKEVAGWGVQKGLNGGTMPHALVRQADG 315 (792) T ss_pred cCcceeeeeeecccccccccccCCCCcEEEEEccCCCCccceEEEEEcCCceEEEecccceeeeecccccCeeEEEcCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeeecCCeEEEEccCCcccccccccccCCCCCcEEEEEcCC Q lcl|Aclame:pro 319 NFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTN 398 (794) Q Consensus 319 t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i~~~~~s~ 398 (794) +|+++..+|++|.+||+++||.|||+|+.|++|+||||||+|++|++|||||+||||||+++|++++.|||||+++++++ T Consensus 316 ~~~~~~~~w~~r~~gd~~tnp~psf~g~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~ 395 (792) T protein:vir:94 316 SFQMQVLPWTQRTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHN 395 (792) T ss_pred cEEEEeccccccccCccccCccceeccCCcceEEEEcceEEEecCCeEEEEccCCcccCccccccCCCCCccEEEEecCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cceeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeec Q lcl|Aclame:pro 399 RIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQD 478 (794) Q Consensus 399 ~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~~~~~~~~ 478 (794) ++++|+|+++++++|+|||+++||+|+|+++|||+|++++++|+|+|+++|+|+.+|++++|+|++|+|++++||+++++ T Consensus 396 ~~~~i~~~v~~~~~L~l~T~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~~v~r~~~~~~ 475 (792) T protein:vir:94 396 RISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTEFDVSDRARPFGVGRGVYFASPRASYTSLNRYYAVQD 475 (792) T ss_pred cceeeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEeeccCCCCceEeCCeEEEeecCCCeeEEEeeeeecc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCCeEEEEEEEcC Q lcl|Aclame:pro 479 VSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSIS 558 (794) Q Consensus 479 ~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~ 558 (794) .+++|.+.|||+|++|||+|+++.+++++++|.+++|+++++|+|++|+|||+++||+|+|||||+|+|.++++||.+.+ T Consensus 476 ~~d~y~a~DlT~~~~hl~~~~v~~~~a~~~~~~~vv~~~~~~g~l~~~ty~~~~~e~~v~aW~~~~~~g~~~~~~~~~~~ 555 (792) T protein:vir:94 476 VSSVKSAEDMSAHVPNYIPNGVFSIRGSSTENFISVLSSNAPSRIFLYKFLYLNEEIAQQSWSHWELGSNVTVLACDSIG 555 (792) T ss_pred ccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCeEEEEEEeecCCceEEEeEEEEEcCCcEEEEEEeecC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899 Q ss_pred CEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcccceEEEEEecCC Q lcl|Aclame:pro 559 SDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKITVLEPDG 638 (794) Q Consensus 559 d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~~~~~~v~~~~~g 638 (794) |+||++|+|+++++++||.+.++..++..+++.+||||+++|..++++|++.+..+.+..+..+|+.|++|+++.+.+|| T Consensus 556 D~l~~~v~r~~~~~~~r~~~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~T~~~~~~~~gl~~l~G~~v~v~~dG 635 (792) T protein:vir:94 556 STMYLVLRNQSHTWMCRAHFTKNSIDFPDEPYRLYIDNKVKYVIPEGSYNDDTYATTVKPVDVYGMKYWTGKFYIVASDG 635 (792) T ss_pred CEEEEEEEeCCCEEEEEEEEeecccccCCCcceeeeeeeeeEEecCcceecCceeeeeccccccCcccccCcEEEEEecC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceecceeeeccc-cccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEEeeccceEE Q lcl|Aclame:pro 639 KITVFEQPTAGW-NSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGTFD 717 (794) Q Consensus 639 ~~~~~~~~~~~~-~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~~tg~~~ 717 (794) .......+..+. ...++++||||+++++|+|||+|+++++++||+++.++|.++.+....||+||||+++++.+||.|. T Consensus 636 ~~~~~~~~~~~~~~~~~~i~~~g~~~a~~v~VGl~y~~~~~~~~~~~~~~~g~~~~~~~~~gr~rl~r~~~~~~~tg~~~ 715 (792) T protein:vir:94 636 LVSWFEPPRGGWPNGVPMLTMSGNREGETIYVGLAISFRYVFSKFLIKKTADDGSIATEDIGRLQLRRAWVNYEDSGAFT 715 (792) T ss_pred ceeEeecccceecCCccEEEecCCccCCeEEEeeeeeEEEEeccceeeccCCCcCccccceeeEEEEEEEEeeeccceeE Confidence 876555444433 3456899999999999999999999999999999999999888899999999999999999999999 Q ss_pred EEEccCCCcceeeecCceecccccccCccccccceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 718 IYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRSSGI 794 (794) Q Consensus 718 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r~rrv 794 (794) +++++.+++..+.+.+.++++..+..+.|++.++.++||+.+|+++.+|+|+|++|+||+|+||+|||+||+|+||| T Consensus 716 v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvlai~~eg~y~~r~~~v 792 (792) T protein:vir:94 716 VEVENTSRLFSYDMAGARLGSNVLRAGGLNVGTGQFRFPVTGNAQLNEVRIISEHTTPLNVIGCGWEGNYLRRSSGI 792 (792) T ss_pred EEEcCCCcceeeeeccceeccccccccccccccceEEEEeeccCceEEEEEEECCCCCEEEEEEEEEEEEeccccCC Confidence 99999998888889999999999999999999999999999999999999999999999999999999999999999 No 6 >protein:vir:3366 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523337;swissprot:trembl:q8w5u3;genbank:gi:17570828;goa:Q8W5U3;uniprot:Q8W5U3;genbank:GeneID:927453 Probab=100.00 E-value=2.3e-243 Score=1350.78 Aligned_cols=792 Identities=69% Similarity=1.165 Sum_probs=755.4 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~~y~l~ 80 (794) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++.+.......++|+|+|+++|+|+|+ T Consensus 1 M~~i~~~~~nl~~GvSqq~d~~r~~~q~~~~~N~~~~~~gG~~rRpGt~~va~~~~~~~~~~~~~~~~~~r~~~~~y~l~ 80 (801) T protein:vir:33 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) T ss_pred CceeEeeccceecceeccchhHhhhhhHhhhhcceeecccCcccCchhHhhhhhcCCCccccceEEEEEEeCCceEEEEE Confidence 99999999999999999999999999999999999999999999999999999998777677888999999999999999 Q ss_pred EeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecCCc Q lcl|Aclame:pro 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) |++++||||+++|.++.+.. ..+|+.++.++++|+++|+||+|||+|++++|++..++......+..+++++++++++ T Consensus 81 ~~~~~irv~~~~G~~~~v~~--~~~y~~~~~~~~~l~~~t~aD~~fi~nr~~~p~~~~~~~~~~~~~~~~~~li~v~~~~ 158 (801) T protein:vir:33 81 FTGEDIKVFDLDGKEYQVRG--DRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQ 158 (801) T ss_pred EcCCeEEEEccCCcEEEEec--CCcceeecCcchheEEEEEcCEEEEeeCCeeecccCCcccccccCCCcceEEEEeecc Confidence 99999999999998877664 4578888888899999999999999999999999887777677778889999999999 Q ss_pred CCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcc---------cccceeEEECCceEEEEECCCCccc Q lcl|Aclame:pro 161 YGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRT---------NLSDWTVNVGQGFIHVTAPSGQQID 231 (794) Q Consensus 161 y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~---------~~~~~tv~~~~~~~~v~~~~~~~~~ 231 (794) |+++|++++++...+++++++++....+...+..+++..|...+.+ ....|.+..++..+++..+++.... T Consensus 159 yg~t~~I~i~gs~~~~~~~~~gs~~~~v~~~s~~~~A~~l~~~~~~~~~~~~~~~~~~~w~~~~~~g~~~i~~p~~~~~~ 238 (801) T protein:vir:33 159 YGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVW 238 (801) T ss_pred cceEEEEEECCcceEEEEeeccccccccccccchhhhhhhhhhhhccCccceeeecCceEEEEecCeEEEEecCCCcccc Confidence 9999999999999999999999888888888888888887765543 3457888888888899999988888 Q ss_pred eeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEE Q lcl|Aclame:pro 232 SFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHA 311 (794) Q Consensus 232 ~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~ 311 (794) ..++.+++.++.+.++.+.++.+++||..+++|++|+|+++.+++.++|||+|+..+++|+||++||..++++.+||||+ T Consensus 239 ~itt~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~g~~~~~~~~tmp~~ 318 (801) T protein:vir:33 239 GLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWA 318 (801) T ss_pred cccccCCccceeEEEEeecccceeeeeeecCCCcEEEEEecCCCcccceEEEEEcCCcEEEEeeccccceeeeecccceE Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEecCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeeecCCeEEEEccCCcccccccccccCCCCCcE Q lcl|Aclame:pro 312 LVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPI 391 (794) Q Consensus 312 lv~~~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i 391 (794) |++.++++|+|+..+|++|.+||+++||+|||+|+||++|+||||||+|++|++|||||+||||||+++|++++.||||| T Consensus 319 l~~~~~~tf~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i 398 (801) T protein:vir:33 319 LVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPI 398 (801) T ss_pred EEEccCceEEecccCccccccCCccccCcccccCCCceEEEEEcceEEEeeCCeEEEEecCCccccccccccCCCCCccE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEE Q lcl|Aclame:pro 392 DVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIH 471 (794) Q Consensus 392 ~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~ 471 (794) +++++++++++|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|++++|+|++|+|++++ T Consensus 399 ~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~ 478 (801) T protein:vir:33 399 DVAVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSIN 478 (801) T ss_pred EEEecCCcceeeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeecccCCCCceEecCeEEEEecCCCeeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCCeEE Q lcl|Aclame:pro 472 RYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQV 551 (794) Q Consensus 472 ~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~ 551 (794) ||+++++..++|.+.|||+|++|||++++++++++++++++++|+++++++|++|+|||+++||+|+|||||+|+|.+++ T Consensus 479 r~~~~~~~~d~y~~~Dlt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g~~~~ 558 (801) T protein:vir:33 479 RYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTV 558 (801) T ss_pred EEEeecccccceehhhHHHHHHHhcCCceEEEEEcCCCCeEEEEEecCCCEEEEEEEecCCCceEEEeeEEEEcCCCEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcccceEE Q lcl|Aclame:pro 552 LACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKI 631 (794) Q Consensus 552 ~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~~~~~~ 631 (794) +|+++.+|+||++|+|+++.+++||.+..+..+...+++.+||||+.++..++++|+.++..+++.++.++|+.|+||++ T Consensus 559 ~~~~~~~d~l~~vv~r~~~~~le~~~~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~~eg~~ 638 (801) T protein:vir:33 559 FAAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRV 638 (801) T ss_pred EEEecCCCEEEEEEEcCCcEEEEEEEEeeccccCCCccceEEeecceEEEecccceecCccccccccccccCCccccceE Confidence 99988999999999999999999999888899988899999999999999999999999999999999999999999999 Q ss_pred EEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEEee Q lcl|Aclame:pro 632 TVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYE 711 (794) Q Consensus 632 v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~ 711 (794) +.+.+||.+.....+..++.+..+++|++++++++|+|||+|+++++++||+++.++|+++.+....+|+|||+++++++ T Consensus 639 v~~~~dG~v~~~~~~~~~~~~~~~l~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~~~~~~ 718 (801) T protein:vir:33 639 SVVFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYE 718 (801) T ss_pred EEEEeCCceEeeeeccccccCceeEEecCCCCCCEEEEeeeeeEEEEeCceEEeccCCCCceeeeeeccEEEEEEEEEee Confidence 99999999887777777777888999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceEEEEEccCCCcceeeecCceecccccccCccccccceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 712 NSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRS 791 (794) Q Consensus 712 ~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r~ 791 (794) +||.|.+.|++.+++..+...+.+++...+..+.|++.+|.++||+.+|+++.+|+|+|++|+||+||||+|||+||+|+ T Consensus 719 ~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvl~i~~eg~y~~r~ 798 (801) T protein:vir:33 719 DSGAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) T ss_pred cCcceEEEECCcccceeeeecccccccccccccccccccceEEEEeeccCceEEEEEEeCCCCCEEEEEEEEEEEEeccc Confidence 99999999999999888899999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCC Q lcl|Aclame:pro 792 SGI 794 (794) Q Consensus 792 rrv 794 (794) ||| T Consensus 799 ~~~ 801 (801) T protein:vir:33 799 SGI 801 (801) T ss_pred cCC Confidence 999 No 7 >protein:vir:94713 Length: 785 # NCBI annotation: tail tube # Family: family:all:825 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338122;genbank:gi:77118200;genbank:GeneID:3707736 Probab=100.00 E-value=5.7e-241 Score=1337.67 Aligned_cols=783 Identities=51% Similarity=0.885 Sum_probs=736.0 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~~y~l~ 80 (794) ||+|+|+||||++|||||+|++||++||++|+||+|+|+||++||||++||++++.+. ....++|+|+|+++|+|+|+ T Consensus 1 M~~~~~s~~n~~~GvSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~~v~~l~~~~--~~~~~~~~f~~~~~~~y~l~ 78 (785) T protein:vir:94 1 MPLITQSIKNLKGGISQQPDILRFSDQGEAQVNCWSSESDGLQKRPPTVFKRRLNIDV--GSNPKFHLINRDEQEQYYIV 78 (785) T ss_pred CcceeeecchhhcceecCCchHHhhhHHhhhhcceeeeccCcccCChhHhhhcccCCC--CcCcEEEEEEeCCCceEEEE Confidence 9999999999999999999999999999999999999999999999999999986543 45679999999999999999 Q ss_pred EeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecCCc Q lcl|Aclame:pro 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) |++++||||+.+|.++.+. +..+|+.++.+.++|+++|+||+|||+|++++|+++.+..+ ..|...+++|+.+++++ T Consensus 79 ~~~~~irv~~~~G~~~~v~--~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~-~~~~~~~~~~~~i~~g~ 155 (785) T protein:vir:94 79 FNGSNIQIVDLSGNQYSVS--GSVDYVKSSNPRDDIRVVTVADYTFVVNRKVVVKGGSEKSH-SGYNRKARALINLRGGQ 155 (785) T ss_pred EcCCeEEEEecCCcEEEEe--cCCCceeecCchhheeeEeeCCEEEEEcCCcceeeeeccCC-cCCCCCCceEEEecccc Confidence 9999999999999887765 45688888888889999999999999999999998665544 44778889999999999 Q ss_pred CCceeEEEecCceEEEEEeecccCCcc-cccccchhhhhhhhhhhcccccceeEEECCceEEEEECCCCccceeEeeccc Q lcl|Aclame:pro 161 YGRELIVHINGKDVAKYKIPDGSQPEH-VNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQIDSFTTKDGY 239 (794) Q Consensus 161 y~~~y~vti~~~~~~t~tt~~~s~~~~-~~~s~~~~ia~~l~~~~~~~~~~~tv~~~~~~~~v~~~~~~~~~~~~~~dg~ 239 (794) |+++|++.+++..++++++++++.+.. ....+..|++.+|...+.+...+|++..+++++++.+++++.+.+.++++++ T Consensus 156 y~~~y~i~i~g~~~at~~t~~~s~a~~s~~~~s~~~i~~~l~~~l~a~~t~~t~~~~g~~i~i~a~s~t~~~~~s~~~~~ 235 (785) T protein:vir:94 156 YGRTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVTAYPTFTFDLGSGFLLITAPSGTDINSVETEDGY 235 (785) T ss_pred cceeEEEeeCCcceeEEEEccCccccccccccchHHHHHHHHHHhhccccceeEEecCcEEEEEecCCccccceeeeccc Confidence 999999999999999999999887655 4567788999999999998899999999999999999999999999999999 Q ss_pred CcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEEEEEecCCc Q lcl|Aclame:pro 240 ADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVRAADGN 319 (794) Q Consensus 240 ~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~~~~~t 319 (794) +++.+..+.++++.+++||..|++|++|+|+++.+++.++|||+|+.++++|+||++||+..+++.++|||.|++.++++ T Consensus 236 ~~t~~~~~~~~~~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~g~w~e~~~~g~~~~~~~~tmp~~l~~~~~~~ 315 (785) T protein:vir:94 236 ANQLISPVLDTVQTISKLPLAAPNGYIIKIQGETNSSADEYYVMYDSNTKTWKETVEPGVVTGFDNTTMPHALVRQSDGS 315 (785) T ss_pred CCeEEEEEEeeccceeccccccCCCCEEEEEccCCCCccceEEEEEcCCceEEEecccceeeeeeccccceEEEeccCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eEEeeccccccccCCcccccCchhcCCCceEEEEEccceeeecCCeEEEEccCCcccccccccccCCCCCcEEEEEcCCc Q lcl|Aclame:pro 320 FDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNR 399 (794) Q Consensus 320 ~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i~~~~~s~~ 399 (794) |+++..+|.+|.+||+++||+|||+|+||++|+||||||+|++|++|||||+||||||+++|+.++.|||||++++++++ T Consensus 316 ~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i~~~~~~~~ 395 (785) T protein:vir:94 316 FEFKALDWSKRGAGNDDTNPMPSFVDATINDVFFYRNRLGFLSGENVIMSRSASYFAFFPKSVATLSDDDPIDVAVSHPR 395 (785) T ss_pred eEEeccccccccCCCcccCCcceecccccceEEEEeceEEEecCCeEEEEccCCcccCccccccCCCCCccEEEEecCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeecc Q lcl|Aclame:pro 400 IAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDV 479 (794) Q Consensus 400 ~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~~~~~~~~~ 479 (794) ++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|++++|+|++|+|++++||+++++. T Consensus 396 ~~~i~~~v~~~~~L~l~T~~~e~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~r~~~~~~~ 475 (785) T protein:vir:94 396 ISILKYAVPFSEQLLLWSDEVQFVMTSSGVLTSKSIQLDVGSEFALGDNARPFAVGRSVFFSAPRGSFTSIKRYFAVADV 475 (785) T ss_pred ceeeEEEeecCCcEEEEecCcEEEEcCCCcccceeEEEEEEEeeeccCCCCceEeCCeEEEEecCCCeeEEEeeeeeccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCCeEEEEEEEcCC Q lcl|Aclame:pro 480 SSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISS 559 (794) Q Consensus 480 ~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d 559 (794) .+.|++.|||+|++|||+|+++++++++++|.+++|+++++|+|++|+|||+++||+|+|||||+|+|.++++|++..+| T Consensus 476 ~d~y~~~dlt~~~~~~~~g~~~~~~a~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~r~~~~~~~~~~~~~~~~d 555 (785) T protein:vir:94 476 SDVKDADDTTGHVLSYIPNGVFDIQGTGTENYICVNSTGAYNRIYIYKFLFKDSVQLQASWSHWEFPKDDKILASASIGS 555 (785) T ss_pred ccceehhhHHHHHHHhcCCCcEEEEEecCCCcEEEEEEcCCCEEEEEEEeecCCceEEEEEEEEEeCCCeEEEEEEEeCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999888999888899 Q ss_pred EEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEccccc-CCcccceEEEEEecCC Q lcl|Aclame:pro 560 DMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIY-GANFGRGKITVLEPDG 638 (794) Q Consensus 560 ~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~-g~~~~~~~~v~~~~~g 638 (794) ++|++++|.++.+++++...++..+...+++++||||++++..++++|++++..+++.++..+ |+.|+||+++.+.+|| T Consensus 556 ~~~~vv~r~~g~~~~~ie~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~~g~~~leg~~v~v~adG 635 (785) T protein:vir:94 556 TMFIVRQHQGGVDIEHLKFIKEATDFPSEPYRLHVDSKVSMVIPIGSFNADTYKTTVDIGAAYGGNAPSPGRYYLIDSQG 635 (785) T ss_pred EEEEEEEcCCCEEEEEEEeecccCCCCCcceeEEeeeeeEEEecCcceeccccccccccccccccCCccCCeEEEEeeCC Confidence 999999999888888887778888888899999999999999999999999999988877766 7899999999999999 Q ss_pred ceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEEeeccceEEE Q lcl|Aclame:pro 639 KITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGTFDI 718 (794) Q Consensus 639 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~~tg~~~~ 718 (794) .......+.. +..+++++||+++++|+|||+|+++++++||++++++|+.. .+...+|+||||++++|.+||.|.+ T Consensus 636 ~~~~~~~v~~---~~~tl~~~g~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~~~-~~~~~gr~~l~r~~~~~~~sg~~~v 711 (785) T protein:vir:94 636 AYLDLGELTS---ISTVITLNGDWSGRTVFIGRSYLMSYKFSRFLIKIEDDSGT-QSEDTGRLQLRRAWVNYRDTGALRL 711 (785) T ss_pred cCccCceEcC---CCcEEEecCCCCCceEEEeeeeeEEEeecceeEEecCCCcc-cccccccEEEEEEEEEeecccceEE Confidence 9876666543 34678999999999999999999999999999999987653 4677899999999999999999999 Q ss_pred EEccCCCcceeeecCceecccccccCccccccceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 719 YVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRSSGI 794 (794) Q Consensus 719 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r~rrv 794 (794) +|++..++..+.+.+++++++ ..+.||+.+++++||+.+|+++.+|+|+|++|+||+|+||+|||+||+|+||| T Consensus 712 ~v~~~~~~~~~~~~~~~~g~~--~~~~~~~~tg~~~vp~~g~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~~~v 785 (785) T protein:vir:94 712 IVRNGEREFVNTFNGYTLGQQ--TIGTTNIGDGQYRFAMNGNALTTSLTLESDYPTPVSIVGCGWEASYAKKARSV 785 (785) T ss_pred EecCCCccceeeecCcccCcc--cccccccccceEEEEeecccceEEEEEEECCCCceEEEEEEEEEEEeccccCC Confidence 999888888888999998854 55778899999999999999999999999999999999999999999999999 No 8 >protein:vir:8887 Length: 808 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813776;genbank:gi:29366731;genbank:GeneID:1258831 Probab=100.00 E-value=2.7e-234 Score=1301.08 Aligned_cols=787 Identities=56% Similarity=0.959 Sum_probs=726.9 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~~y~l~ 80 (794) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++|++++....+.+|++|+|+++|+|+++ T Consensus 1 M~~v~~s~~n~~~GvSqq~d~~R~~~q~~~~~N~~~~~~gG~~rRpgt~~v~~l~~~~~~~~~~~~~~~~~~~~~~y~v~ 80 (808) T protein:vir:88 1 MGLVSQSVKNLKGGISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQEQYFVG 80 (808) T ss_pred CcceeeecchhccceeccchhHhhhhhhhhhhcceeeeccccccCCchheeeeeeccCCCCCCcEEEEEEeCcCceEEEE Confidence 99999999999999999999999999999999999999999999999999999988877788899999999999999999 Q ss_pred EeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecCCc Q lcl|Aclame:pro 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) |+++++|||+++|.++.|. +..+|+.+++++++|+++|++|+|||+|++++|++..+...........++++++++++ T Consensus 81 ~~~~~i~v~~~~G~~~~v~--~~~~y~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~~~~~vr~g~ 158 (808) T protein:vir:88 81 FSGTGLAVWDLKGNNYTVR--GYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTHAAYPRLDGRAIINVRGGQ 158 (808) T ss_pred EeCCeEEEEEcCCceEEEe--ecCcceEecCChhheeEEEEcCEEEEEcCCcceeecccccccCCCCCCccEEEEEcccc Confidence 9999999999999888876 45678888889999999999999999999999998777666666677888999999999 Q ss_pred CCceeEEEecCce-----EEEEEeecccCCc-----------ccccccchhhhhhhhhhhcccc--cceeEEECCceEEE Q lcl|Aclame:pro 161 YGRELIVHINGKD-----VAKYKIPDGSQPE-----------HVNNTDAQWLAEELAKQMRTNL--SDWTVNVGQGFIHV 222 (794) Q Consensus 161 y~~~y~vti~~~~-----~~t~tt~~~s~~~-----------~~~~s~~~~ia~~l~~~~~~~~--~~~tv~~~~~~~~v 222 (794) |+++|++++++.. +.++++++++... ....+...|++..+...+.+.. .+|.+....+.+++ T Consensus 159 y~~~y~i~i~g~~s~~~~t~t~~~~~~s~~~v~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~~~~~~~~~~~~~~~~~~i 238 (808) T protein:vir:88 159 YGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAAELARQLTVSLGGSGWSFQAGTGWILI 238 (808) T ss_pred cCceEEEEEecCCcceeeeEeEEEccCcccceeeccceeecccCCccccccchhhheeeeeecccccceEEEeccceEEE Confidence 9999999998642 4456666554322 2234567788888887766544 57788888999999 Q ss_pred EECCCCccceeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceee Q lcl|Aclame:pro 223 TAPSGQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQ 302 (794) Q Consensus 223 ~~~~~~~~~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~ 302 (794) ..+++.++..+++++|++++.+....+.++++++||+.+++|++++|++..+++.++||++|+..+++|+||++|+...+ T Consensus 239 ~~~a~~~~~~~~t~~g~~~~~~~~~~~~v~~~~~lp~~~p~g~~v~i~~~~~~~~~~~yv~~~~~~~~w~e~~~~~~~~~ 318 (808) T protein:vir:88 239 NAPANDNVRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVEITGESARSGDNYWVQYDASGKVWKETAKPKIIAG 318 (808) T ss_pred EeccCceeEEEcccCCcCcceeeeeeeeccceeeccccCCCCcEEEEEecCCCCCceeEEEEEcCCeEEEEeeeccceee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCcceEEEEEecCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeeecCCeEEEEccCCccccccccc Q lcl|Aclame:pro 303 VLWETMPHALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASI 382 (794) Q Consensus 303 ~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~ 382 (794) ++.+||||.|++.++++|+|+..+|++|.+||+++||+|||+|++|++|+||||||+|++|++|||||+||||||+++|+ T Consensus 319 ~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~ 398 (808) T protein:vir:88 319 FNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGATINDVFFFRNRLGFLSGENVVMSRTSKYFNFFPSSV 398 (808) T ss_pred ecccceeEEEEecCCceEEEEecccccccccccccCccceecCCceeEEEEEcceEEEeeCCeEEEEeccCcccccCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEe Q lcl|Aclame:pro 383 ANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFAS 462 (794) Q Consensus 383 ~~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~ 462 (794) +++.|||||++++++++++.|+|+++++++|+|||+++||+|+|+++|||+|++++++|+|+|++.|+|+.+|++++|+| T Consensus 399 ~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~f~~ 478 (808) T protein:vir:88 399 ATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSKTILSSKTIELDLTTEFDVSDGARPYGIGRGVYFAA 478 (808) T ss_pred cCCCCCccEEEEecCCccceeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEecccCCCCceEeCCeEEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCCCeEEEEEEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEe Q lcl|Aclame:pro 463 PRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSH 542 (794) Q Consensus 463 ~~g~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~ 542 (794) ++|+|++++||+++++..+.|.+.|||+|++|||+++++++++++++|.+++|+++++|+|++|+|||+++||+|+|||| T Consensus 479 ~~g~~~~v~r~~~~~~~~d~y~~~dlt~~~~h~~~~~~~~~~~~~~~~~~~v~~~~~~g~l~~~~y~~~~~e~~v~aW~r 558 (808) T protein:vir:88 479 PRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFIYKFLYLDEILQQQSFSH 558 (808) T ss_pred cCCCeeEEEEEEEeeeccCceehhhHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEcCCCEEEEEEEeccCCceeEEeeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eecCCCeEEE--EEEEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEccc Q lcl|Aclame:pro 543 WDFGENVQVL--ACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPT 620 (794) Q Consensus 543 w~~~g~~~~~--~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~ 620 (794) |+|+|.++++ ++...+|+||++|+|+++.+++||.+.++..+...+++++||||++++. +++|++.+..+.+..+. T Consensus 559 ~~~~g~~~~~~~~~~~~~d~l~~vV~r~~~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~--~g~~~~~~~~t~~~~~~ 636 (808) T protein:vir:88 559 WEFGDAATTRVLAASCIGSYCYLMIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKTIV--LGAYNIDTNLTSFDVRT 636 (808) T ss_pred EecCCCeeEEEEEEeccCCEEEEEEEcCCcEEEEEEeeccCCCCCccccceeeeeeeeeec--cccccCccccceeeccc Confidence 9999988754 3466799999999999999999999999999999999999999999876 46788888888888776 Q ss_pred cc-CCcccceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeec Q lcl|Aclame:pro 621 IY-GANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIG 699 (794) Q Consensus 621 ~~-g~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~ 699 (794) .+ ++.|+++..+.+..||.... ....++.+.+++++++++++++|+|||+|+++++++||++++++|+++++....+ T Consensus 637 ~~~~~~~~~~~~~~~~~dg~~~~--~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~p~~~~~~~g~~~~~~~~~g 714 (808) T protein:vir:88 637 AYGGTPGPESTFYTIDQQGVLIE--HEARDWATNPYISFVGNRAGEQMVIGKQYTFQYEFSKFLIKQTADDGSTSTEDIG 714 (808) T ss_pred ccccccccceeEEEEcCCceEEe--eecccccCcceEEeCCCccCceEEEeeeeeEEEEecceEEecCCCCcceeecccc Confidence 54 66799999999998887532 2333455667899999999999999999999999999999999999999999999 Q ss_pred cEEEEEEEEEeeccceEEEEEccCCCcceeeecCceecccccccCccccccceEEEEeccccceEEEEEEECCcCCEEEE Q lcl|Aclame:pro 700 RLQLRRAWVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNII 779 (794) Q Consensus 700 r~~l~~~~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvl 779 (794) |+|||++++++.+||.|.+.|++..++..+.+.+++++... ..+.+++.+|.++||+.+|+++.+|+|+|++|+||+|| T Consensus 715 r~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~tg~~~vp~~~~~~~~~v~i~~d~P~P~til 793 (808) T protein:vir:88 715 RLQLRRAWLNYEESGAFEINVNNGSSEFVYVMTGGRLGIQR-VLGELSVGTGQFKFPVTGNAVNQRVTITSSNPNPLNVI 793 (808) T ss_pred eEEEEEEEEEeecccceEEEeCCCcccceeeccCcccCccc-ccCccccccceEEEEecccCceeEEEEEECCCCceEEE Confidence 99999999999999999999998878778889999998654 57888899999999999999999999999999999999 Q ss_pred EEEEEEEEeccccCC Q lcl|Aclame:pro 780 GCGWEGNYLRRSSGI 794 (794) Q Consensus 780 ai~~eg~y~~r~rrv 794 (794) ||+|||+||+|+||| T Consensus 794 si~~eg~y~~r~~~v 808 (808) T protein:vir:88 794 GCGWEGNYIRRSSGI 808 (808) T ss_pred EEEEEEEEeccccCC Confidence 999999999999999 No 9 >protein:vir:97014 Length: 800 # NCBI annotation: 33 # Family: family:all:825 # MgeID: mge:1644 # MgeName: K1-5 # Cross-refs: genbank:acc:YP_654134;genbank:gi:108862018;genbank:GeneID:5075963 Probab=100.00 E-value=5.3e-221 Score=1228.23 Aligned_cols=769 Identities=23% Similarity=0.370 Sum_probs=684.2 Q ss_pred ceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEe---CCCceEE Q lcl|Aclame:pro 2 ALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINR---DEHEQYY 78 (794) Q Consensus 2 a~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~---~~~~~y~ 78 (794) =.|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++|+++. ...+++||.+ +.+|.|+ T Consensus 1 ~~v~~s~~n~~~GvSqq~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva~l~~~~---~~~~~~~~~~~~d~~eq~~v 77 (800) T protein:vir:97 1 MEVQGSLGRQIQGISQQPPAVRLDGQCTAMVNMIPDVVNGTQSRMGTTHIAKILDAG---TDDMATHHYRRGDGDEEYFF 77 (800) T ss_pred CeeEeechhhhcccccCchhHhhhhhhhhhhcceeccccccccCCchhhheeecCCC---cccceeEEEEEcCCceEEEE Confidence 258899999999999999999999999999999999999999999999999998764 3568888776 3568889 Q ss_pred EEEeCCceEEEEcCCeEEEEEcCcc-cceee-cCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEee Q lcl|Aclame:pro 79 AVFTGSGIRVFDLSGNEKQVRYPNG-SNYIK-TANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINV 156 (794) Q Consensus 79 l~~~~~~~rv~~~~g~~~~v~~~~~-~~y~~-a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v 156 (794) ++|+++++|||+++|.++.|..... .+|+. ++++.++|+++|++|+|||+|++++|++..+.. .....++++++ T Consensus 78 ~~~~~~~~rv~~~~G~~~~v~~~~~~~~y~~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~----~~~~~~~~~~v 153 (800) T protein:vir:97 78 TLKKGQVPEIFDKYGRKCNVTSQDAPMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKASSRKS----PKVGNKAIVFC 153 (800) T ss_pred EEEcCCEEEEEecCCcEEEEecCCcceEEEeccCCCccceeEEEEcCEEEEeeCceecccccccc----cCCCcceEEEE Confidence 9999999999999999988887653 35653 456788999999999999999999998765543 24577899999 Q ss_pred cCCcCCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhccc--ccceeEEECCceEEEEECCCCccceeE Q lcl|Aclame:pro 157 RGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTN--LSDWTVNVGQGFIHVTAPSGQQIDSFT 234 (794) Q Consensus 157 ~~g~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~--~~~~tv~~~~~~~~v~~~~~~~~~~~~ 234 (794) ++++|+++|+++|++..++++++++++++..+...++.+|+.+|...+.+. ..+|++..++++++++++++..+ +++ T Consensus 154 ~~g~y~~~y~i~I~~~~~~~~~t~~~t~~~~~~~~~~~~ia~ql~~~~~~~~~~~~~t~~~~G~~~~i~~~~~~~~-~v~ 232 (800) T protein:vir:97 154 AYGQYGTSYSIVINGANAASFKTPDGGSADHVEQIRTERITSELYSKLQQWSGVSDYEIQRDGTSIFIERRDGASF-TIT 232 (800) T ss_pred eecccceeeeeccCCcceEEEEEcCCCCcccceeccHHHHHHHHHHhhhccccccceEEEeCCcEEEEEEcCCceE-EEE Confidence 999999999999999999999999999999999999999999999988654 37899999999999999888765 688 Q ss_pred eecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEecc---CceEEEeecccceeeEecCcceEE Q lcl|Aclame:pro 235 TKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAE---RKVWTETLGWNTEDQVLWETMPHA 311 (794) Q Consensus 235 ~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~---~~~w~e~~~~~~~~~~~~~t~p~~ 311 (794) +.+++.++.+..+.++++++++||+.|++|+.++|+++++++.+.||++|+.. .++|+|+++++...+++.+||||. T Consensus 233 t~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~~~~~tmp~~ 312 (800) T protein:vir:97 233 TTDGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLLGFDKGTMPYI 312 (800) T ss_pred ecCCcCceeeeEEeeeccchhhchhhCCCCcEEEEEccCCCCCceEEEEEEecccCcceEEEeeccccccceecccceEE Confidence 99999999999999999999999999999999999999999999999999975 468999999999999999999999 Q ss_pred EEEe----cCCceEEeeccccccccCCcccccCchhcC----CCceEEEEEccceeeecCCeEEEEccCCcccccccccc Q lcl|Aclame:pro 312 LVRA----ADGNFDFKWLEWSPKSCGDVDTNPWPSFVG----SSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIA 383 (794) Q Consensus 312 lv~~----~~~t~~~~~~~w~~r~~gd~~s~p~psf~g----~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~ 383 (794) +++. .+++|++++.+|++|.+||+++||.|+|++ ++|++|+||||||+|++|++|||||+||||||+++|++ T Consensus 313 ~~~~~~~~~~g~~~~~~~~w~~r~~gd~~tnp~p~f~~~~~~~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~ 392 (800) T protein:vir:97 313 IERTDIINGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTAGEAVIASRTSYFFDFFRYTVI 392 (800) T ss_pred EEEeecccccceeEEEeccccccccCccccCccccccCCcCCCCceeEEEEeeeEEEecCCeEEEEecCCcccccccccc Confidence 9987 578999999999999999999999999998 89999999999999999999999999999999999999 Q ss_pred cCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEec Q lcl|Aclame:pro 384 NLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASP 463 (794) Q Consensus 384 ~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~ 463 (794) ++.|||||++++++++++.|+|+++++++|+|||+++||+|+|+++|||+|++++++|+|+|+++|+|+.+|++++|+|+ T Consensus 393 ~~~DdD~I~~~~ss~~v~~i~~~v~~~~~L~i~T~~~q~~ls~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~fv~~ 472 (800) T protein:vir:97 393 SALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPGDKPLEKSNALLKPVTTFEVNNKVKPVVTGESVMFATN 472 (800) T ss_pred CCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeeeccCCCCcEEeCCeEEEeeC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCeEEEEEEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEee Q lcl|Aclame:pro 464 RSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHW 543 (794) Q Consensus 464 ~g~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w 543 (794) +|+|++++||.+ ++.+++|.+.|||+|++|||+|++++++++++++.+++|+++++|+|++|+|||+++||+|+||||| T Consensus 473 ~g~~s~vre~~~-~~~~d~~~a~DlT~~~~hl~~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~~~~aW~~~ 551 (800) T protein:vir:97 473 DGSYSGVREFYT-DSYSDTKKAQAITSHVNKLIEGNITNMAASTNVNRLLVTTDKYRNIIYCYDWLWQGTDRVQSAWHVW 551 (800) T ss_pred CCCeeEEEEEee-eecccceehhhHHHHHHHhcCCceEEEEEeCCCCeEEEEEEcCCCEEEEEEEeecCCceEEEeEEEE Confidence 999999999987 5568889999999999999999999999999999999999999999999999999999999999999 Q ss_pred ecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeec-----------Ccceeccce Q lcl|Aclame:pro 544 DFGENVQVLACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIP-----------SGTYNDDTF 612 (794) Q Consensus 544 ~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~-----------~~t~~~~~~ 612 (794) ++++.+.++||...+|+||++|+|+++.+++||.+.... + ..+++.++||+....... +..+ ...+ T Consensus 552 ~~~~~~~~~~~~~~~d~l~~vv~r~~~~~ler~~~~~~~-~-~~~~~~~~lD~~~~~~~~~~~~~~~~v~~~~~~-~~~~ 628 (800) T protein:vir:97 552 KWPIGTKVRGMFYSGELLYLLLERGDGVYLEKMDMGDAL-T-YGLNDRIRMDRQAELVFKHFKAEDEWVSEPLPW-VPTN 628 (800) T ss_pred ecCCCeEEEEEEEcCCeEEEEEEcCCcEEEEEEecccCc-C-cccccceeccccceeeeeeeecccceEeccccc-cCCC Confidence 999988889998899999999999999999998765432 2 244557888854332211 1111 1112 Q ss_pred eeEEEcccccCCcccceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccc Q lcl|Aclame:pro 613 TTSIHIPTIYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGS 692 (794) Q Consensus 613 ~t~~~~~~~~g~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~ 692 (794) ...+....++|++|++|..+....+. ... +.......+++++++++|||||+|+++++++||++++++|+. T Consensus 629 ~~~~~~~~v~g~~~~~G~~v~~~~~~-~~~-------~~~~~~~~~~~~~~~~~v~vGl~Y~~~~~~~p~~i~~~~g~~- 699 (800) T protein:vir:97 629 PELLDCILIEGWDSYIGGSFLFKYNP-SDN-------TLSTTFDMYDDSHVKAKVIVGQIYPQEFEPTPVVIRDNQDRV- 699 (800) T ss_pred cceeEEEEecccccccCceEEEEecC-ccC-------cccccceEEeCCCCCcEEEEeeeeeEEEEecceEEEecCCCc- Confidence 23333445678999999988655432 221 111223478899999999999999999999999999988763 Q ss_pred eeeeeeccEEEEEEEEEeeccceEEEEEccCCCcc--eeeecCceecccccccCccccccceEEEEeccccceEEEEEEE Q lcl|Aclame:pro 693 TSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSNW--KYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILS 770 (794) Q Consensus 693 ~~~~~~~r~~l~~~~~~~~~tg~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~ 770 (794) ...+|+||++++|+|.+||.|.+.|++.+++. .+...++++++..+..+.|++++|+++|||.+|+++.+|+|+| T Consensus 700 ---~~~~r~~i~r~~~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~ 776 (800) T protein:vir:97 700 ---SYIDVPVVGLVHLNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPLRAKSTDVVYRIIV 776 (800) T ss_pred ---eeecceEEEEEEEeecccccEEEEEccccCCceeeeecCccccccccccCCccccccceEEEEeecccceeEEEEEE Confidence 45689999999999999999999999988864 3457788999999999999999999999999999999999999 Q ss_pred CCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 771 DETTPLNIIGCGWEGNYLRRSSGI 794 (794) Q Consensus 771 ~~p~P~tvlai~~eg~y~~r~rrv 794 (794) ++|+||+|+||+|||+||+|+||| T Consensus 777 d~PlP~tvlsi~~eg~y~~r~~rv 800 (800) T protein:vir:97 777 ESPHTFQLRDIEWEGSYNPTKRRV 800 (800) T ss_pred CCCCcEEEEEEEEEEEeecccccC Confidence 999999999999999999999999 No 10 >protein:vir:105647 Length: 800 # NCBI annotation: putative tail tubular B protein # Family: family:all:825 # MgeID: mge:1674 # MgeName: K1E # Cross-refs: genbank:acc:YP_425011;genbank:gi:83571759;uniprot:Q2WC41;genbank:GeneID:3837288 Probab=100.00 E-value=8.7e-220 Score=1221.56 Aligned_cols=778 Identities=23% Similarity=0.360 Sum_probs=679.8 Q ss_pred ceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEe-CCCceEEEE Q lcl|Aclame:pro 2 ALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINR-DEHEQYYAV 80 (794) Q Consensus 2 a~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~-~~~~~y~l~ 80 (794) =.|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++|+++..+ +...++.+.+ ++++.|+++ T Consensus 1 ~~v~~s~~nl~~GvSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (800) T protein:vir:10 1 MEVQGSLGRQIQGISQQPPAVRLDGQCTTMVNMVPDVVNGTQSRMGTTHIAKLLDEGTD-NMATHHYRRGEGDEEYFFTL 79 (800) T ss_pred CeEEeecchhcccccccchhHhhhhhhhhhhcceeeeccCcccCCcceEEEeecCCCCC-ccEEEEEecCCccceEEEEE Confidence 25889999999999999999999999999999999999999999999999999776532 2222222232 446677788 Q ss_pred EeCCceEEEEcCCeEEEEEcCcc-cceee-cCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecC Q lcl|Aclame:pro 81 FTGSGIRVFDLSGNEKQVRYPNG-SNYIK-TANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRG 158 (794) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~-~~y~~-a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~ 158 (794) +.++++|||+.+|.++++..+.. ..|+. ++.+.++|+++|+||+|||+|++++|+++.+.... ....+++++++ T Consensus 80 ~~g~~~rv~~~~G~~~~v~~~~~~~~~~~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~----~~~~~~~~vr~ 155 (800) T protein:vir:10 80 KKGQVPEIFDKHGRKCNVISQDAPMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKVSNRKSPK----VGDKAIVFCAY 155 (800) T ss_pred EcCCeEEEEecCCcEEEeecCCcceeeeeccCCchhhEEEEEEcCEEEEecCcccccccccCCCC----CCceEEEEEec Confidence 88899999999999999988765 34554 56677899999999999999999999987665443 23568999999 Q ss_pred CcCCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcccc--cceeEEECCceEEEEECCCCccceeEee Q lcl|Aclame:pro 159 GQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNL--SDWTVNVGQGFIHVTAPSGQQIDSFTTK 236 (794) Q Consensus 159 g~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~--~~~tv~~~~~~~~v~~~~~~~~~~~~~~ 236 (794) ++|+++|++++++..++.+++++++++.+...+++++++.+|...+.+.. +++++...++.+++.+.++.+. .++.. T Consensus 156 g~y~~~y~i~i~g~~~~~~~t~~~~~~~~~~~~s~~~i~~~L~~~l~~~~~~~~~t~~~~g~~i~i~~~~~~~~-~~~~~ 234 (800) T protein:vir:10 156 GQYGTSYSIIINGTTAASFKTPDGGSAEHVEQIRTERITSELYSKLQQWSGVNDYEIQRDGTSIFIERRDGKSF-TVTTT 234 (800) T ss_pred cccccceeEEeccceEEEEEecCCCcccccccccHHHHHHHHHhhhhhcCcccceEEEEcCcEEEEEEecCCce-EEEEe Confidence 99999999999999999999999999999999999999999998886543 6788999999999998887654 67888 Q ss_pred cccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEecc---CceEEEeecccceeeEecCcceEEEE Q lcl|Aclame:pro 237 DGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAE---RKVWTETLGWNTEDQVLWETMPHALV 313 (794) Q Consensus 237 dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~---~~~w~e~~~~~~~~~~~~~t~p~~lv 313 (794) +++.++.+..+.++++++++||+.|++|+.++|+++.+++.+.||++|+.. .++|+||++++...+++.+||||+|+ T Consensus 235 ~~~~~~~~~~~~~~v~~~~~Lp~~~~~g~~~~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~~~~~tmp~~lv 314 (800) T protein:vir:10 235 DGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLLGFDKGTMPYIIE 314 (800) T ss_pred ecCCcceEEEEEeeccceeeccccCCCCceEEEEcCCCCCCceeEEEEEeccccceEEEeecccCceeeeecccccEEEE Confidence 999999999999999999999999999999999999999999999999974 36799999999999999999999999 Q ss_pred Eec----CCceEEeeccccccccCCcccccCchhcC----CCceEEEEEccceeeecCCeEEEEccCCcccccccccccC Q lcl|Aclame:pro 314 RAA----DGNFDFKWLEWSPKSCGDVDTNPWPSFVG----SSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANL 385 (794) Q Consensus 314 ~~~----~~t~~~~~~~w~~r~~gd~~s~p~psf~g----~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~ 385 (794) +.+ +++|++.+.+|++|.+||+++||+|||+| ++|++|+||||||+|++|++|||||+||||||+++|++++ T Consensus 315 ~~~~~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~~~~~~~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~ 394 (800) T protein:vir:10 315 RTGIIDGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTAGEAVIASRTSYFFDFFRYTVISA 394 (800) T ss_pred EeeeeecceeEEEEeccccccccCCCCCCCCchhcCCCCCCCceeEEEEeeeEEEeeCCeEEEEccCCccccccccccCC Confidence 887 78999999999999999999999999997 5799999999999999999999999999999999999999 Q ss_pred CCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCC Q lcl|Aclame:pro 386 SDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRS 465 (794) Q Consensus 386 ~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g 465 (794) .|||||++++++++++.|+|+++++++|+|||+++||+|+|+++|||+|++++++|+|+|++.|+|+.+|++++|+|++| T Consensus 395 ~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~q~~l~g~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g 474 (800) T protein:vir:10 395 LATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPGDKPLEKSNALLKPVTTFEVNNKVKPVVTGESVMFATNDG 474 (800) T ss_pred CCCccEEEEEcCCcceeeeeEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeeeccCCCCceEeCCeEEEecCCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CeEEEEEEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeec Q lcl|Aclame:pro 466 SFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDF 545 (794) Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~ 545 (794) +|++++||.+ ++.+++|.+.|||+|++|||+|++++++++++|++++||+++++++|++|+|||+++||+|+|||||++ T Consensus 475 ~~s~vre~~~-~~~~d~~~a~DlT~~~~hl~~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~yl~~~~e~~~~aW~~w~~ 553 (800) T protein:vir:10 475 SYSGVREFYT-DSYSDTKKAQAITSHVNKLIEGNITNMAASTNVNRLLVTTDKYRNIIYCYDWLWQGTDRVQSAWHVWEW 553 (800) T ss_pred CeeEEEEEee-eecccceehhhHHhHHHHhcCCceEEEEEeCCCCeEEEEEEcCCCeEEEEEEeecCCceEEEEEEEEEc Confidence 9999999987 556788999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcc----cc Q lcl|Aclame:pro 546 GENVQVLACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIP----TI 621 (794) Q Consensus 546 ~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~----~~ 621 (794) ++...++||...+|+||++|+|+++.+++||...... + ..+++++||||+.++.....+++.. ......+ .. T Consensus 554 ~~~~~~~~~~~~~d~l~~iv~r~~~~~ier~~~~~~~-~-~~~~~~~~lD~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 629 (800) T protein:vir:10 554 PMGTKVRGMFYSGELLYLLLERGDGVYLEKMDMGDAL-T-YGLNDRIRMDRQAELIFKHFKAEDE--WISEPLPWTPTNP 629 (800) T ss_pred CCCcEEEEEEEeCCeEEEEEECCCcEEEEEEecccCc-c-ccccceeeeecceeecccccccCcc--eEEEeccccccCC Confidence 8877888888889999999999999999998654432 2 3566789999998766554333221 1111111 22 Q ss_pred cCCcccceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccE Q lcl|Aclame:pro 622 YGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRL 701 (794) Q Consensus 622 ~g~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~ 701 (794) .++.+++........+|.+.....+..++...+....+|++++++|+|||+|+++++++||++++++|+. ...+|+ T Consensus 630 ~~~~~~~~~~~~~~~~g~v~~~~~~~~g~~~~~~~~~~g~~~~~~v~VGl~Y~s~~~~~~~~i~~~~g~~----~~~~r~ 705 (800) T protein:vir:10 630 ELLDCILIEGWDSYIGGSFLFKYKPSDNTLSTTFDMHDDNHVKAKVIVGQIYPQEFEPTPVVIRDRQDRV----SYIDVP 705 (800) T ss_pred cceEEeeeccceeecCceeEEEEEecCCceEeeeeecCCCcccceEEEeeeeeEEEeecceEEEcCCCcc----cccCCe Confidence 2333444444455566666665566655544443334788899999999999999999999999988763 445799 Q ss_pred EEEEEEEEeeccceEEEEEccCCCcc--eeeecCceecccccccCccccccceEEEEeccccceEEEEEEECCcCCEEEE Q lcl|Aclame:pro 702 QLRRAWVNYENSGTFDIYVENQSSNW--KYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNII 779 (794) Q Consensus 702 ~l~~~~~~~~~tg~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvl 779 (794) ||+|++++|.+||.|.+++++..++. .....++..+...+..+.+++++|+++||+.+|+++.+|+|++++|+||+|+ T Consensus 706 ~i~r~~~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvl 785 (800) T protein:vir:10 706 VVGLVHLNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPLRAKSTDAVYRIIVESPHTFQLR 785 (800) T ss_pred EEEEEEEEeecCceEEEEeccCcccceeEEccCCeeccccccccCcccccCceEEEEEeccCceeEEEEEECCCCcEEEE Confidence 99999999999999999999988753 3556677788888889999999999999999999999999999999999999 Q ss_pred EEEEEEEEeccccCC Q lcl|Aclame:pro 780 GCGWEGNYLRRSSGI 794 (794) Q Consensus 780 ai~~eg~y~~r~rrv 794 (794) ||+|||+||+|+||| T Consensus 786 ai~~eg~y~~r~~rv 800 (800) T protein:vir:10 786 DIEWEGSYNPTKRRV 800 (800) T ss_pred EEEEEEEeecccccC Confidence 999999999999999 No 11 >protein:vir:7021 Length: 803 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:141 # MgeName: SP6 # Cross-refs: genbank:acc:NP_853594;genbank:gi:31711676;genbank:GeneID:1481802 Probab=100.00 E-value=1.9e-219 Score=1219.75 Aligned_cols=777 Identities=22% Similarity=0.350 Sum_probs=676.7 Q ss_pred ceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEe----CCCceE Q lcl|Aclame:pro 2 ALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINR----DEHEQY 77 (794) Q Consensus 2 a~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~----~~~~~y 77 (794) =+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++|+++. ...+++++.+ +++|+| T Consensus 1 ~~v~~s~~nl~~GvSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~~va~l~~~~---~~~~~~~~~~~~~~~~e~~~ 77 (803) T protein:vir:70 1 MEVQGSLGRQIQGISQQPPAVRLDGQCSEMVNMVPDVVEGTKSRMGTTHIAKLLEYG---EDDMAVHHYRRGGEGEEEYF 77 (803) T ss_pred CeEEeecchhccccccCchHHhhhhhhhhhhcceeeeccccccCChhhhhhhhcCCC---cccceeeEEEecCCCceEEE Confidence 368999999999999999999999999999999999999999999999999987653 2345555443 356899 Q ss_pred EEEEeCCceEEEEcCCeEEEEEcCcc-cceee-cCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEe Q lcl|Aclame:pro 78 YAVFTGSGIRVFDLSGNEKQVRYPNG-SNYIK-TANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLIN 155 (794) Q Consensus 78 ~l~~~~~~~rv~~~~g~~~~v~~~~~-~~y~~-a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 155 (794) +++|++++||||+.+|.++.+..... ..|+. ++.+..+|+++|+||+|||+|++++|++..++.. .+...++++ T Consensus 78 ~~~~~~~~irv~~~~G~~~~v~~~~~~~~~l~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~----~~~~~~~~~ 153 (803) T protein:vir:70 78 FIMKKGQVPEIFDKQGRKCMVQSQDAPMTYLSEVTNPREDVQFMTIADVTFMLNRKKIVKARPERSP----QVGSTAIVF 153 (803) T ss_pred EEEecCCeEEEEEcCCcEEEEecCCceeEEEeecCCChhheeEEEEcCEEEEecCceeeeeccccCC----CCCCceEEE Confidence 99999999999999999888887653 34553 4567888999999999999999999998655543 345678999 Q ss_pred ecCCcCCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhccc--ccceeEEECCceEEEEECCCCcccee Q lcl|Aclame:pro 156 VRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTN--LSDWTVNVGQGFIHVTAPSGQQIDSF 233 (794) Q Consensus 156 v~~g~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~--~~~~tv~~~~~~~~v~~~~~~~~~~~ 233 (794) +++++|+++|++++++..++++++++++.......++++|++.++...+... .++|++...++++++.+.++.+...+ T Consensus 154 vr~g~y~~~y~itIng~~~a~~~t~~~~~~~~~~~~~~~~ia~~l~~~~~~~~s~a~~~~~~~g~~~~i~~~~~~~~~~~ 233 (803) T protein:vir:70 154 MAYGQYGTHYKIIIDGVVAAGYKTRDGAEAHHIEDIRTESIAYNLYQSLQSWDKIADYEIQLDGTSIYITRRDGSTTFDI 233 (803) T ss_pred EeecCCcceEEEEeCCcceEEEEeCCCcccccccccchhhhhhhhhhheeccccccceEEEECCcEEEEEEcCCCCeeEE Confidence 9999999999999999999999999999999999999999999998877543 35799999999999999999988899 Q ss_pred EeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccC---ceEEEeecccceeeEecCcceE Q lcl|Aclame:pro 234 TTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAER---KVWTETLGWNTEDQVLWETMPH 310 (794) Q Consensus 234 ~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~---~~w~e~~~~~~~~~~~~~t~p~ 310 (794) ++++|..++.++.+.+.++++.+||+.|++|+.+++++++.++.|.|||+|+..+ ++|+|+++++...+++.+|||| T Consensus 234 ~t~~g~~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~g~~~~d~y~v~~~~~~~~~~~w~e~a~~g~~~~~~~~t~p~ 313 (803) T protein:vir:70 234 TTEDGAKGKDLVAIKYKVASTDLLPSRAPEGYKVQVWPTGSKPESRYWLQAEKQNGNIVSWKETLAADVLIGFDKSTMPY 313 (803) T ss_pred EeecCcCCcEEEEEEecccceeeccccCCCCceEEEEcCCCCCCceeeEEEEeccCCccceEeeeccceeeeeecccccE Confidence 9999999999999999999999999999999999999999999999999999765 4899999999999999999999 Q ss_pred EEEEecC----CceEEeeccccccccCCcccccCchhcC----CCceEEEEEccceeeecCCeEEEEccCCccccccccc Q lcl|Aclame:pro 311 ALVRAAD----GNFDFKWLEWSPKSCGDVDTNPWPSFVG----SSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASI 382 (794) Q Consensus 311 ~lv~~~~----~t~~~~~~~w~~r~~gd~~s~p~psf~g----~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~ 382 (794) .+++.+. ++|++++.+|+.|.+|||++||+|+|++ +||++|+||||||+|++|++|||||+||||||+++|+ T Consensus 314 ~~v~~~~~~~~~~~~~~~~~~~~r~~gdd~tnp~psf~~~~~~~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~ 393 (803) T protein:vir:70 314 IIERTGFVNGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTLGGMFMVQNRLCVTAGEAVIATRTSYFFDFFRYTA 393 (803) T ss_pred EEEEEEEeecceeEEEEeeccccccccccccCccccccCccCCCCceeEEEEeceEEEeeCCeEEEEccCCccccccccc Confidence 9998754 6799999999999999999999999986 6899999999999999999999999999999999999 Q ss_pred ccCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEe Q lcl|Aclame:pro 383 ANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFAS 462 (794) Q Consensus 383 ~~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~ 462 (794) +++.|||||++++++++++.|+|+++++++|+|||+++||+|+|+++|||+|++++++|+|+|++.|+|+.+|++++|+| T Consensus 394 ~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~i~T~~~q~~l~g~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~ 473 (803) T protein:vir:70 394 VSAVATDPFDVFSDASEVYQLKHAVTLDGSTVLFADKSQFILPGDKPLEKSNVLLKPVTTFEVNNNVKPVATGESVMFAT 473 (803) T ss_pred cCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEeeccCCCccEEeCCeEEEec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCCCeEEEEEEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEe Q lcl|Aclame:pro 463 PRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSH 542 (794) Q Consensus 463 ~~g~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~ 542 (794) ++|+|++++||.+ ++.+++|.+.|+|+|++|||++++++++++++++.++||+++++++||+|+|||.++||+|+|||| T Consensus 474 ~~g~~s~vre~~~-~~~~d~y~a~Dlt~~a~hl~~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~yl~~~~e~~v~aW~r 552 (803) T protein:vir:70 474 SEGAYSGIREFYT-DSYSDTKKAQAITSHVNKLLEGNVIMMSASTNVNRLLVLTDKYRNIIYCYDWLWQGTERVQAAWHK 552 (803) T ss_pred cCCCeeEEEEEec-cccccceehhhhhhhhHhhcCCceEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCcEEEEeEEE Confidence 9999999999987 556788999999999999999999999999999999999999999999999999999999999999 Q ss_pred eecCCCeEEEEEEEcCCEEEEEEEeCCCEE-EEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccc Q lcl|Aclame:pro 543 WDFGENVQVLACQSISSDMYVILRNEFNTF-LARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTI 621 (794) Q Consensus 543 w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~-~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~ 621 (794) |+|+|.++++|+...+|+||++|+|+++++ ++||..... ....+++++||||+.++.... .+...+.+...+++. T Consensus 553 ~~~~g~~~~~~~~~~~d~l~~vv~r~~~g~~ier~~~~~~--~~~~~~~~~~lD~~~~~~~~~--~~~~~~~~~~~~~~~ 628 (803) T protein:vir:70 553 WEWPLGTFIRGMFYSGEHLYLLIERGSTGVYLERMDMGDA--LVYNLNDRIRMDRQAELIFRH--IKAEDVWVSEPLPWQ 628 (803) T ss_pred EEcCCCEEEEEEEecCCEEEEEEEECCCeEEEEEEecccc--cccCCcceeEeccceeEeecc--ccCCceeeeeccccc Confidence 999999999999888999999999998764 666654433 223566799999998876542 222222222223222 Q ss_pred ----cCCcccceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeee Q lcl|Aclame:pro 622 ----YGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTED 697 (794) Q Consensus 622 ----~g~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~ 697 (794) .++.+.++.......++.+.................+++++++++|+|||+|+++++++||++++++|+ ... T Consensus 629 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~~~~~~~~a~~v~VGl~Y~~~~~~~~~~i~~~~~~----~~~ 704 (803) T protein:vir:70 629 PTDVTLLDCVLIDGWDSYIGGSFLFSYNPGDNTLTTTFDMHDDDHVKAKVVVGQLYPQEFEPTQVVIRDNQER----VSY 704 (803) T ss_pred CcccceeeEEEeeeeeeecCCeEEEEEcCCCccceeeeeEECCCCcccEEEEeeeeeEEEeecceEEEcCCCc----ccc Confidence 223333333333333343322111111111112246899999999999999999999999999998875 445 Q ss_pred eccEEEEEEEEEeeccceEEEEEccCCCcc--eeeecCceecccccccCccccccceEEEEeccccceEEEEEEECCcCC Q lcl|Aclame:pro 698 IGRLQLRRAWVNYENSGTFDIYVENQSSNW--KYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTP 775 (794) Q Consensus 698 ~~r~~l~~~~~~~~~tg~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P 775 (794) .+|.||+++++++++||.|.++|++..++. .+...++++++..+..+.+++.+|+++||+.+|+++.+|+|++++|+| T Consensus 705 ~~~~rl~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~s~~~~g~~~~~~g~~~~~tg~~~vP~~~~~~~~~v~i~~d~P~P 784 (803) T protein:vir:70 705 IDVPTVGLVHLNLDKYPDFKVEVKNLKSGKVRNVLASNRVGGAINNIVGYVEPREGVFKFPLRSLSTDTVYRVMVESPHT 784 (803) T ss_pred ccccEEEEEEEEeecccceEEEEecCCccccceeeccchhccccccccCccccccceEEEEeeccCcceEEEEEECCCCC Confidence 567899999999999999999999988764 356789999999999999999999999999999999999999999999 Q ss_pred EEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 776 LNIIGCGWEGNYLRRSSGI 794 (794) Q Consensus 776 ~tvlai~~eg~y~~r~rrv 794 (794) |+|++|+|||+||+|+||| T Consensus 785 ~tvlsi~weg~y~~r~rrv 803 (803) T protein:vir:70 785 FQLRDIEWEGSYNPTKRRV 803 (803) T ss_pred eEEEEEEEEEEEecccccC Confidence 9999999999999999999 No 12 >protein:vir:103341 Length: 806 # NCBI annotation: tail tubular protein B-like protein # Family: family:all:825 # MgeID: mge:1609 # MgeName: Era103 # Cross-refs: genbank:acc:YP_001039670;genbank:gi:125999999;genbank:GeneID:4818417 Probab=100.00 E-value=2.5e-216 Score=1202.54 Aligned_cols=774 Identities=22% Similarity=0.369 Sum_probs=682.9 Q ss_pred ceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEe-CCCceEEEE Q lcl|Aclame:pro 2 ALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINR-DEHEQYYAV 80 (794) Q Consensus 2 a~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~-~~~~~y~l~ 80 (794) =+|+|+||||++|||||+|++|||+||++|+||+|+|+|||+||||++||+.|.+. +....+++.|++ ++.++|+++ T Consensus 1 ~~v~~s~~nl~~GvSqQ~d~~R~~~q~~~~~N~~~~~~~Gl~rRPgt~~va~l~~~--~~~~~~~~~~~~~~~~~~y~v~ 78 (806) T protein:vir:10 1 MEVQGSYGRQLQGVSQQPIAVRLPGQVTSQLNAVPNVVDGLKTRMGSKHLARILNS--LDANSLIHHYKRGDDAEEYFVI 78 (806) T ss_pred CeeEeecchhccceeccChhHhhhhhhhhhhcceeccccccccCCchhhhhhhcCC--CCccceEEEEEecCCceEEEEE Confidence 48999999999999999999999999999999999999999999999999998764 345678999999 556899999 Q ss_pred EeCCceEEEEc-CCeEEEEEcCcc-cceeecC-CCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeec Q lcl|Aclame:pro 81 FTGSGIRVFDL-SGNEKQVRYPNG-SNYIKTA-NPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVR 157 (794) Q Consensus 81 ~~~~~~rv~~~-~g~~~~v~~~~~-~~y~~a~-~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~ 157 (794) |.++++|+|+. +|.++.+..... ..|+.++ .++.+|+++|++|+|||+|++++|+++.+.... ...+++++++ T Consensus 79 ~~~g~i~v~~~~~G~~~~v~~~~~~~~yl~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~----~~~~~~v~v~ 154 (806) T protein:vir:10 79 LQPGQVPVIFTVGGLACPVNTQGSAATYLSSSSLPRETTQLMTIGDYTFVLNRKMPVQARGDVTPS----LDNKGLVYVA 154 (806) T ss_pred EcCCcEEEEEcCCCcEEEecCCCceEEEeccCCCCcceeeEEEEcCEEEEecCcEeeeecccccCC----CCcceEEEEe Confidence 99999999985 898888886543 4455543 477899999999999999999999987766543 3446899999 Q ss_pred CCcCCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcc---cccceeEEECCceEEEEECCCCccceeE Q lcl|Aclame:pro 158 GGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRT---NLSDWTVNVGQGFIHVTAPSGQQIDSFT 234 (794) Q Consensus 158 ~g~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~---~~~~~tv~~~~~~~~v~~~~~~~~~~~~ 234 (794) +++|+++|++++++..++++++++++++.......++|++.++...+.+ ...+|+....+..+++..+++.. ..++ T Consensus 155 ~g~y~~~y~i~Ing~~~a~~~t~~~~~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~g~~~~i~~~~~~~-~~~~ 233 (806) T protein:vir:10 155 YANFSFTYQILINGQVAAEHKTASSEDVKNEDLVRTDYVAGKLLENFNSRTASFPGFSMYQDGNVLVVDNSNGAN-YALT 233 (806) T ss_pred ecccCceeeEEeccceEEEEEeccCCCcccccccchhHHHHHHHhhhcccccccceeEEEEcccEEEEecCCCCc-cEEE Confidence 9999999999999999999999999999888889999999999887765 45678888889999998877654 4577 Q ss_pred eecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEecc---CceEEEeecccceeeEecCcceEE Q lcl|Aclame:pro 235 TKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAE---RKVWTETLGWNTEDQVLWETMPHA 311 (794) Q Consensus 235 ~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~---~~~w~e~~~~~~~~~~~~~t~p~~ 311 (794) +.+|+.++.+..+.++++.+++||+.|++|+.++++++++...+.||++|+.. .++|+|+++++...+++.+|||+. T Consensus 234 ~~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~~~~w~e~~~~~~~~~~~~~t~p~~ 313 (806) T protein:vir:10 234 TVDGADGQDLVAIRHKVTNLDTLPNRAPVGYKVQVWPTGSKPESRYWLQAESQDGSKVTWVETIAPGVRKGWNAATMPHV 313 (806) T ss_pred EeeCCCCceeEEeecccCccccCccccCCCcEEEEeccCCCCCCceEEEEEeeccCceEEEeecccccccceeccccceE Confidence 88899999999999999999999999999999999999999999999999865 457999999999999999999999 Q ss_pred EEEec-----CCceEEeeccccccccCCcccccCchhcC----CCceEEEEEccceeeecCCeEEEEccCCccccccccc Q lcl|Aclame:pro 312 LVRAA-----DGNFDFKWLEWSPKSCGDVDTNPWPSFVG----SSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASI 382 (794) Q Consensus 312 lv~~~-----~~t~~~~~~~w~~r~~gd~~s~p~psf~g----~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~ 382 (794) +++.+ +++|+++.++|++|.+||+++||.|||++ ++|++|+||||||+|++|++|||||+|||+||+++|+ T Consensus 314 ~v~~~~~~~~~~~~~~~~~~w~~r~~Gd~~tn~~psF~~~~~~~~it~v~f~q~RL~f~s~~~v~~Srsgd~~nF~~~t~ 393 (806) T protein:vir:10 314 LVRESLNANGSANFTYRPGEWEDRDVGDDLTNDFPSLLNDSSPQPISSMLMVQNRLMLTSGEAVVASRTSRFFDFFRYTV 393 (806) T ss_pred EEeeeeeecccceeEEEecccccccccccccCccCcccCCCCCccceEEEEEeeeEEEecCCeEEEEccCCcccCccccc Confidence 99876 78999999999999999999999999987 6789999999999999999999999999999999999 Q ss_pred ccCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEe Q lcl|Aclame:pro 383 ANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFAS 462 (794) Q Consensus 383 ~~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~ 462 (794) ++++|||||++++++++++.|+|+++++++|+|||+++||+|+|+++|||+|++++++|+|+|+++|+|+.+|++++|+| T Consensus 394 ~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~Fv~ 473 (806) T protein:vir:10 394 LATVDTDPFDVFADIEEVYNIRWSAQMDGDVVLFTSDQQFTLPGDKPLTPTSAVIRPVTQFKMTPGVKPAPSGDSILFAF 473 (806) T ss_pred cCCCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeecccCCCCceEeCCeEEEee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCCCeEEEEEEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEe Q lcl|Aclame:pro 463 PRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSH 542 (794) Q Consensus 463 ~~g~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~ 542 (794) ++|+|++++||.+ ++.+++|.+.|||+|+||||+|+++.+++++++|.+++|+++++|+|++|||||+++||+|+|||| T Consensus 474 ~~g~~s~vre~~y-~~~~d~~~~~DlT~~~~hl~~g~~~~~~~~~~~~~~~~~~~~~dg~l~~~ty~~~~~e~~v~aW~r 552 (806) T protein:vir:10 474 DQGSYSGIREFFT-DSYSDTKKAQPATSHVDKYIRGKVLELSASSSFNRAFIITSPDRNILYVYDWLYEGTEKVQNAWHK 552 (806) T ss_pred CCCCeeEEEEEEe-eeeccceehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeEEe Confidence 9999999999986 556788999999999999999999999999999999999999999999999999999999999999 Q ss_pred eecCCCeEEEEEEEcCCEEEEEEEeCC--CEEEEEEEEeeccccC--CCCccceeeeeeeEEeecCcceeccceeeEEEc Q lcl|Aclame:pro 543 WDFGENVQVLACQSISSDMYVILRNEF--NTFLARISFTKNAIDL--QGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHI 618 (794) Q Consensus 543 w~~~g~~~~~~~~~~~d~ly~vv~r~~--~~~~~~~~~~~~~~~~--~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~ 618 (794) |+|+|.+.++||...+|++|++|+|++ +++.+++.|+++..+. .++.+.+||||+.++.+.... .+..+. . T Consensus 553 w~~~~~~~~~~~~~~~d~l~~vv~R~~~~~g~~~~~iE~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~---~~~~~~--~ 627 (806) T protein:vir:10 553 WSFPAGTVLHAVSYSNEKLYLVLTRTNTSGGVAGVYIEVMDMGDELEYGLQDRVRMDRRATLSMTYNA---TTRVWT--S 627 (806) T ss_pred eeeCCCeEEEEEEEecCeEEEEEEEcCCcccEEEEEEEeecCCCCCCcccceeeeccccceEEEeccc---ccccee--e Confidence 999999888899889999999999987 6777788888875433 345678999999999865322 222211 1 Q ss_pred ccccCCcccceEEEEEecCCceecc----eeeeccccccceEEEc---ccccCCeEEEEeeeeEEEecCceeEeccCCcc Q lcl|Aclame:pro 619 PTIYGANFGRGKITVLEPDGKITVF----EQPTAGWNSDPWLRLS---GNLEGRMVYIGFNINFVYEFSKFLIKQTADDG 691 (794) Q Consensus 619 ~~~~g~~~~~~~~v~~~~~g~~~~~----~~~~~~~~~~~~~~i~---~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~ 691 (794) -.+.++.|+++..+.+.++|..+.. ..+..++. .++++. .+.++.+|+|||+|++++++++|++++++++ T Consensus 628 ~~l~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~--~~v~~~~~~~~~~~~~v~vGl~Y~s~~~~t~p~~~~~~~~- 704 (806) T protein:vir:10 628 SALPWLPQDLSSLDAVLVSGWAGYVGGAFQFSYNASN--NTISTNFDLAEGNTATIVVGETYWYEVEPTPPLIKDSKDR- 704 (806) T ss_pred eeeccccccccceeEEEEeeccccCCceEEEEEcCcc--ceEeeeeeecCCCCcEEEEeeeeeEEEEECCeeEeccCCC- Confidence 2334677889989988888865422 12222221 112221 2456789999999999999999999987765 Q ss_pred ceeeeeeccEEEEEEEEEeeccceEEEEEccCCCc--ceeeecCceecccccccCccccccceEEEEeccccceEEEEEE Q lcl|Aclame:pro 692 STSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSN--WKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYIL 769 (794) Q Consensus 692 ~~~~~~~~r~~l~~~~~~~~~tg~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~ 769 (794) ....+|+||+++.+++.+||.|.++|.+.++. +.+...+.+++...+..+.|++.+++++||+.+|+++.+|+|+ T Consensus 705 ---~~~~~r~~l~r~~~~~~~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~~~~~~~~v~i~ 781 (806) T protein:vir:10 705 ---VSYLDTPTVGNVYLNLDMYPDFSVVVTDKETLQERTVYLANKTAGSITNVIGYIAPHEGTLRIPLRRKSTDVSFKIR 781 (806) T ss_pred ---ccccccEEEEEEEEEeecceeeEEEEcccCCCcceeeeccCcccccccccccccccccceEEEEeeecCceeEEEEE Confidence 34457999999999999999999999988763 5677889999999999999999999999999999999999999 Q ss_pred ECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 770 SDETTPLNIIGCGWEGNYLRRSSGI 794 (794) Q Consensus 770 ~~~p~P~tvlai~~eg~y~~r~rrv 794 (794) |++|+||+|+||+|||+||+|+||| T Consensus 782 ~d~P~P~tvlai~~eg~y~~r~~rv 806 (806) T protein:vir:10 782 SKSPATFQLRDIEWTGSYNPRKRRV 806 (806) T ss_pred ECCCCceEEEEEEEEEEeecccccC Confidence 9999999999999999999999999 No 13 >protein:vir:80253 Length: 777 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1879 # MgeName: LKA1 # Cross-refs: genbank:acc:YP_001522886;genbank:gi:158345179;genbank:GeneID:5687516 Probab=100.00 E-value=5.3e-214 Score=1189.85 Aligned_cols=765 Identities=19% Similarity=0.298 Sum_probs=658.3 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~~y~l~ 80 (794) ||+|+++||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++++.......++++|.++++|+|+|+ T Consensus 1 M~~i~~~~~nf~~GvS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~~~~e~~~~l~ 80 (777) T protein:vir:80 1 MSYFAGSYRQLLFGVSQQTAKDRLEGQVESQLNMQSDLVTGPRRRSPVHLIADAMAATDANRLAYSLATFSGREVLLLVD 80 (777) T ss_pred CceeeeecchhhcccccCCchHHhhhHHhhhhcceeeeccCceeCcchHhhhhhcCCCcccceeEEEEecCCCeeEEEEE Confidence 99999999999999999999999999999999999999999999999999999998776777788999999999999999 Q ss_pred EeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecCCc Q lcl|Aclame:pro 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) +++++||||+..|... ...++.+|+.+ .+..+|+++|++|+|||+|++++|+++.+..+...|.+..++++++++++ T Consensus 81 ~g~g~irv~~~~~g~~--~~~~~~~Yl~a-~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~ 157 (777) T protein:vir:80 81 TLDGTLTILDDATGEV--LFTGTNSYLTA-GTGRSIRFAALDDSVFVANTEVIPQTQLWSGASAYPDPTRAGYLYVVAGA 157 (777) T ss_pred ecCCeEEEEECCCCeE--EEecCCCceee-ccccceeEEEEcCEEEEEeCCccceeeecccCCCccCcccceEEEeeccC Confidence 9999999999855443 34455678754 45668999999999999999999999999988888999999999999999 Q ss_pred CCceeEEEecCceEE-EEEeecccCCcccccccchhhhhhhhhhhcc-----cccceeEEECCceEEEEECCCCccceeE Q lcl|Aclame:pro 161 YGRELIVHINGKDVA-KYKIPDGSQPEHVNNTDAQWLAEELAKQMRT-----NLSDWTVNVGQGFIHVTAPSGQQIDSFT 234 (794) Q Consensus 161 y~~~y~vti~~~~~~-t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~-----~~~~~tv~~~~~~~~v~~~~~~~~~~~~ 234 (794) |+++|++.+++...+ +++....+........+..|++.+|...+.+ ...+|++..++++++++++++.++ + T Consensus 158 ~g~~y~i~i~~~~~~~~~t~~~~t~~~~~~~~~~~~ia~~L~~~~~~~~~~~s~~~~~~~~~g~~~~i~~~~~~~~---t 234 (777) T protein:vir:80 158 FSKQYRLSITNQVTGVTTSVDVTTSATEASQATGEYVITQLRTAAEADATIGTAAGFAYYQDGAYLYVTAPEAIAV---S 234 (777) T ss_pred CCceeeEeecCCcCceeEEEecCCcccccccccchhhhhhhhhhhccccceeecCceEEEeCCcEEEEEecCceeE---e Confidence 999999999876543 4444555666666777889999999876544 346889999999999998886543 3 Q ss_pred eecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEEEEE Q lcl|Aclame:pro 235 TKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVR 314 (794) Q Consensus 235 ~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~ 314 (794) . ++++++.+......+++..+||+.++.+..+++.+++++ .++||++|+..+++|+||++|+...++ .+|||.|++ T Consensus 235 ~-~~g~~~~~~~~~~~v~~~~~lp~~~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~w~e~~~~~~~~~~--~t~p~~l~~ 310 (777) T protein:vir:80 235 T-DSGSNFLRASNAASIRDAAELPAKLPADADGFIIATGAA-KNKTYFRWVDLERKWDEDASRGAQAEL--IDMPLRITY 310 (777) T ss_pred c-CCcCccceeeeeEEEeeccccccccccccceEEEeCCCC-CCceEEEEEccCcEEEEeecccccccc--cccceEEEe Confidence 3 345566677778899999999999999988888876664 477999999999999999999998876 699999998 Q ss_pred ecCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeeecCCeEEEEccCCcccccccccccCCCCCcEEEE Q lcl|Aclame:pro 315 AADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVA 394 (794) Q Consensus 315 ~~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i~~~ 394 (794) .+ ++|.++..+|++|.+||+++||+|||+|++|++|+||||||+|+||++|||||+|||+||+++|++++.|||||+++ T Consensus 311 ~~-~~~~~~~~~w~~r~~gd~~tn~~Psf~g~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~s~~~~~DdDpI~~~ 389 (777) T protein:vir:80 311 SA-PNFSLTALNYERRASGDATSNPALKFTEQGISGMTTMQGRLVLLAGEYVCMSASGNPLRWFRASVSTQSDDDPIEVA 389 (777) T ss_pred cC-CceEeeccCCccccccccccCCCceecCCceeEEEEEcceeeeecCCeEEEEeccCccccccccccCCCCCccEEEE Confidence 76 58999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EcCCcceeeeeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEe-cCCCeEEEEEE Q lcl|Aclame:pro 395 VSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFAS-PRSSFTSIHRY 473 (794) Q Consensus 395 ~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~-~~g~~~~~~~~ 473 (794) ++++++++|+|+++++++|+|||+++||+|+|+++|||+|++++++|+|+|+++|+|+.+|++++|++ |.|++++++|| T Consensus 390 ~ss~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~Fv~~r~g~~s~v~e~ 469 (777) T protein:vir:80 390 ATAPVASPYEYAVAFNKDLVLFAKTHQGLVPGANLLTSRNATAAVVTEYSFQNSCSPVVAGRTVFFASPRSGPWSAVWEM 469 (777) T ss_pred EcCCcceeeeeeeecCCcEEEEecCceEEEeCCCcccceeEEEEEEEeeccCCCCCceEeCCeEEEEecCCCceeEEeee Confidence 99999999999999999999999999999999999999999999999999999999999999999996 56778999999 Q ss_pred eeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCCeEEEE Q lcl|Aclame:pro 474 YAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLA 553 (794) Q Consensus 474 ~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~~~ 553 (794) ++.++.++.|++.|||+|++|||++++.+++++++|+.+ +|++++||+|++|+|||+++||+|+|||||+|+|+++.+| T Consensus 470 ~~~~~~~d~y~a~Dlt~~~~hl~~~~v~~~a~s~~p~~v-~~~~~~dg~l~~~ty~~~~~e~~v~aW~r~~~~g~v~~v~ 548 (777) T protein:vir:80 470 LPSQYTDAQVEASDSTSHLPKYIAGPVRFLATSSTTSIV-VVGTSNLRELVVHEYLWQGGEKVHAAWHKWSFPQDITGAY 548 (777) T ss_pred eecccccCceehhHHHHHHHHhcCCceEEEEEcCCCceE-EEEEcCCCeEEEEEEeecCCceEEEeeEEeccCCcEEEEE Confidence 998888899999999999999999998888777766665 6888999999999999999999999999999999988766 Q ss_pred EEEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcccceEEEE Q lcl|Aclame:pro 554 CQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKITV 633 (794) Q Consensus 554 ~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~~~~~~v~ 633 (794) + ++|+||++|+|++..+++||...... +...+ ..+||||+.. .+.+|+.....+.+.+++. .++.... T Consensus 549 ~--i~d~l~~iv~r~~~~~le~~~~~~~~-d~~~~-~~~~~D~~~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 616 (777) T protein:vir:80 549 F--RGDRLILLFHVAGRVILGELFMQRLG-DAQSI-PGGFLDLYRV---GAANADEEVAIPAFAADLY-----PEDSTFA 616 (777) T ss_pred E--ECCEEEEEEEcCCeEEEEEEeeccCC-CCccc-ceeeeeeeee---eeeeeCCccceeEeecccc-----CCcceeE Confidence 5 58999999999999999998665543 32233 4689999643 2344555444444444432 2223333 Q ss_pred EecCCceecc----eeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEE Q lcl|Aclame:pro 634 LEPDGKITVF----EQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVN 709 (794) Q Consensus 634 ~~~~g~~~~~----~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~ 709 (794) +..+|..... ..+... .....+++++++++++|+|||+|+++++++||++++++|+.+ ..+|+||+|++|+ T Consensus 617 v~~~~~~~~~~~~~~~v~~~-~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g~~~----~~~r~~i~r~~~~ 691 (777) T protein:vir:80 617 YKLSGEFQSLGQRCGDRRVD-GATVYIKVVGAQAGDQYRIGLRYLSKLGPTRPILRDPNGVPI----TTERTQLHRLTWS 691 (777) T ss_pred EEecCcccccceeeeeEEeC-CceeeEEEcCCCCCCEEEEeeeeEEEEEeCceEEeCCCCcee----eecCeEEEEEEEE Confidence 3333322111 111111 112356899999999999999999999999999999888643 4479999999999 Q ss_pred eeccceEEEEEccCCCc-ceeeecCceecccccccCccccccceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEe Q lcl|Aclame:pro 710 YENSGTFDIYVENQSSN-WKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYL 788 (794) Q Consensus 710 ~~~tg~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~ 788 (794) |++||.|.++|++.+++ .++.+.+.++++..+..+.|++.+++++||+.+|+++.+|+|++++|+||+|+||+|||+|| T Consensus 692 ~~~sg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~~~~~~~~v~i~~d~P~P~tilsi~~e~~y~ 771 (777) T protein:vir:80 692 LDSTGEVTFRVADQARGESAYTTTPLRLYSRDLGAGLPLAATATLDTPARVDMQTAQFSLETDDYYDMNITSLEYGFRYN 771 (777) T ss_pred eeccccEEEEEcCCCCcceeeeecCceecccccccccccccceEEEEEEeecCcceEEEEEECCCCceEEEEEEEEEEee Confidence 99999999999998875 67888999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccCC Q lcl|Aclame:pro 789 RRSSGI 794 (794) Q Consensus 789 ~r~rrv 794 (794) +|+||= T Consensus 772 ~r~~r~ 777 (777) T protein:vir:80 772 QRYRRQ 777 (777) T ss_pred cccccC Confidence 997766 No 14 >protein:vir:6326 Length: 826 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:132 # MgeName: phiKMV # Cross-refs: genbank:acc:NP_877473;genbank:gi:33300845;uniprot:Q7Y2D1;genbank:GeneID:1482615 Probab=100.00 E-value=3.2e-213 Score=1185.52 Aligned_cols=769 Identities=22% Similarity=0.311 Sum_probs=638.4 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCC-CceEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDE-HEQYYA 79 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~-~~~y~l 79 (794) ||+|+|+||||++|||||+|++|||+||++|+||+|+|+|||+||||++||++++++.......++|.++|++ +|+|++ T Consensus 1 M~~i~~s~~n~~~GvSqq~d~~r~~~q~~~~~N~~~~~~~G~~rRpg~~~v~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 80 (826) T protein:vir:63 1 MSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLV 80 (826) T ss_pred CceeeeecchhhcceeccCchHhhhhhhhhhhcceeeccCCcccCchhHhhhhhccCCccccccEEEEEecCCCceEEEE Confidence 9999999999999999999999999999999999999999999999999999998875544445666666755 667889 Q ss_pred EEeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecCC Q lcl|Aclame:pro 80 VFTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGG 159 (794) Q Consensus 80 ~~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g 159 (794) +|++++||||+++|....+..+...+|+. +.+..+|+++|+||+|||+|++++|++..+.. ...++..+++++++++ T Consensus 81 ~~~~g~irv~~~~~g~~~~~~~~~~~y~~-~~~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~--~~~~~~~~~~~~v~~g 157 (826) T protein:vir:63 81 AQHRGELYLFDERDGRLLMGQPLVHDYLK-ANDYRQLRAATVADDLFIANLSVKPEADRTDI--KGVDPNKAGWLYIKAG 157 (826) T ss_pred EecCCcEEEEEcCCCeEEEcCCCCCceee-ecCccceEEEEeCCEEEEEeCCeeeeeccccc--cccCCCCcEEEEeecc Confidence 99999999999866554444455566765 46788999999999999999999998754432 3445677899999999 Q ss_pred cCCceeEEEecCce---------EEEEEeecccCCcc-----cccccchhhhhhhhhhhccc------------------ Q lcl|Aclame:pro 160 QYGRELIVHINGKD---------VAKYKIPDGSQPEH-----VNNTDAQWLAEELAKQMRTN------------------ 207 (794) Q Consensus 160 ~y~~~y~vti~~~~---------~~t~tt~~~s~~~~-----~~~s~~~~ia~~l~~~~~~~------------------ 207 (794) +|+++|++++++.+ +++++++++..+.. ...++..|++.++...+.+. T Consensus 158 ~Y~~~y~vti~~~~~~~gt~~s~t~t~~t~~~~~a~~~~~~~~~~~s~~yia~~l~~~~~a~~~~~~~~~t~~~~~~~~~ 237 (826) T protein:vir:63 158 QYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPD 237 (826) T ss_pred ccCceEEEEEEeccccCCccccceEEEEeccCCcccccccccceeeeeeeeeeeceeeeeeccccccCCCccccceecCC Confidence 99999999998642 46677766543321 23345667776655432211 Q ss_pred -----ccceeEE--ECCceEEEEECCCCccceeEeecccCcceeeeEEEEeeeeeeeccccCCC----eEE----EEEcC Q lcl|Aclame:pro 208 -----LSDWTVN--VGQGFIHVTAPSGQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNG----YMV----KIVGD 272 (794) Q Consensus 208 -----~~~~tv~--~~~~~~~v~~~~~~~~~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g----~~v----~i~~~ 272 (794) ..++... ....++++...+.... .. ..+++...........++..++||+.++++ +.+ .+.+. T Consensus 238 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~g~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~ 315 (826) T protein:vir:63 238 ANAATIAGYLNQRGVQDGYIAFRGDADIHV-EV-STDMGNNYGIASGGMSLNATADLPALLPGVGAPGVGVQFMDGAVMA 315 (826) T ss_pred cccceeecceeEecccccEEEEeeCCcccE-EE-ccCCCCcceEEEEEeeccceeeccccCCCcccceEEEeeEEeEEec Confidence 0011111 1122333333322221 12 223344455666677889999999887763 322 34555 Q ss_pred CCCCcceEEEEEeccCceEEEeecccceeeEecCcceEEEE-EecCCceEEeeccccccccCCcccccCchhcCCCceEE Q lcl|Aclame:pro 273 ASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALV-RAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDV 351 (794) Q Consensus 273 ~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv-~~~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v 351 (794) .+...+.||++|+..+++|+||++|+.. +..+||||.|+ +.++++|+++..+|++|.+||+++||+|||+|+||++| T Consensus 316 ~g~~~d~~y~~~~~~~~~w~e~~~~~~~--~~~~tmp~~l~~~~~~~~f~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v 393 (826) T protein:vir:63 316 TGSTKAPVYFEWDSANRRWAERAAYGTD--WVLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFVTRGITGM 393 (826) T ss_pred CCCcccceEEEEEcCCceEEEEeecCcc--cccccceEEEEEeccCCeEEEeccccccccccccccCCCccccCCCceEE Confidence 6667799999999999999999999875 45679999998 56899999999999999999999999999999999999 Q ss_pred EEEccceeeecCCeEEEEccCCcccccccccccCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCCCccc Q lcl|Aclame:pro 352 FFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLT 431 (794) Q Consensus 352 ~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lT 431 (794) +||||||+|++|++|||||+||||||+++|++++.|||||+++++++++++|+|+++++++|+|||+++||+|+|+++|| T Consensus 394 ~f~q~RL~f~~~~~v~~Srtgd~~nF~~~s~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~~~q~~ls~~~~lT 473 (826) T protein:vir:63 394 TTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVT 473 (826) T ss_pred EEEeceEEEeeCCeEEEEccCCccccccccccCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCcEEEEeCCCccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceEEEEeeeecccCCCCcEEeCCeEEEEecCC-CeEEEEEEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCCC Q lcl|Aclame:pro 432 SKSVELNLTTQFDVQDRARPFGIGRNVYFASPRS-SFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTEN 510 (794) Q Consensus 432 P~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g-~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~ 510 (794) |+|++++++|+|+|++.|+|+.+|++++|+|++| +|++++||++..+.++.|++.|||+|++|||++++.+++++++|+ T Consensus 474 P~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~s~v~e~~~~~d~~~~y~~~dlt~~~~~l~~~~v~~~a~s~~~~ 553 (826) T protein:vir:63 474 PRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSG 553 (826) T ss_pred ceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeeccccceehhHHHHHHHHhcCCCeEEEEEcCCCC Confidence 9999999999999999999999999999999887 689999999988888889999999999999999998888887766 Q ss_pred eEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEE-EEeecc---ccCC Q lcl|Aclame:pro 511 FCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSDMYVILRNEFNTFLARI-SFTKNA---IDLQ 586 (794) Q Consensus 511 ~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~-~~~~~~---~~~~ 586 (794) .+ +|++++||+|++|+|||+++||+|+|||||+|+|+++++|+ .+|+||++|+|+++++++|| .|++++ .++. T Consensus 554 ~v-~~~~~~dg~l~~~~y~~~~~e~~v~aW~~~~~~g~v~~~~~--i~d~l~~iv~r~~~~~~~r~~~e~~~~~~~~~~~ 630 (826) T protein:vir:63 554 YL-VFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYF--TGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYP 630 (826) T ss_pred EE-EEEEcCCCEEEEEEEeeCCCcEEEEeEEEEecCCcEEEEEE--ECCeEEEEEEeCCCEEEEEEEEEecCCccccccC Confidence 65 68999999999999999999999999999999998776554 58999999999999999998 555543 3345 Q ss_pred CCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcccceEEEEEecCCceecceeeec-cccccceEEEcccccCC Q lcl|Aclame:pro 587 GEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKITVLEPDGKITVFEQPTA-GWNSDPWLRLSGNLEGR 665 (794) Q Consensus 587 ~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~~~~~~v~~~~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~~ 665 (794) .+++.+++||...+...... .. ...+++|+++..+.+.+++.+.....+.. ..++...+++|+++.+. T Consensus 631 ~~d~~~~~d~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~l~~~~~~~~~ 699 (826) T protein:vir:63 631 KYDYWRRIEATVAGELELTK-------QH----WDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGA 699 (826) T ss_pred CccceEEEEEeeeeeeccCc-------ce----eecccCcccccEEEEeeCccccCCccceEEecCCEEEEecCCCcccc Confidence 66778899998776543211 00 11367899999999999998754332211 12233467889999999 Q ss_pred eEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEEeeccceEEEEEccCCCc--ceeeecCceeccccccc Q lcl|Aclame:pro 666 MVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSN--WKYTMAGARLGSNTLRA 743 (794) Q Consensus 666 ~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~~tg~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~ 743 (794) +|+|||+|+++++++||++++++|+++. .+|+||||++++++++|.|.++|++..++ ..+.+.+.+++...+.. T Consensus 700 ~v~VGl~y~s~~~~~~~~~~~~~g~~~~----~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (826) T protein:vir:63 700 VYVVGCEFWSKVEFTPPVLRDHNGLPMT----STRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNA 775 (826) T ss_pred EEEEeeeeeEEEEecceEEEccCCCcce----eccEEEEEEEEEeeccccEEEEecCccccceeEeecCCceeccccccc Confidence 9999999999999999999999988654 37999999999999999999999998775 45678899999998899 Q ss_pred CccccccceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 744 GRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRSSGI 794 (794) Q Consensus 744 ~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r~rrv 794 (794) +.|++.++.+++|+.+++++.+|+|+|+.|+||+|++|+|||+||+|+||| T Consensus 776 g~p~~~t~~~~vP~~~~~~~~~i~i~~d~P~p~~il~i~~~~~yn~r~rrv 826 (826) T protein:vir:63 776 GEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV 826 (826) T ss_pred ccccccceEEEEEEeeccceEEEEEEeCCCCcEEEEEEEEEEEEeceeecC Confidence 999999999999999999999999999999999999999999999999999 No 15 >protein:vir:100022 Length: 976 # NCBI annotation: T7-like tail tubular protein B # Family: family:all:825 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214208;genbank:gi:61806431;genbank:GeneID:3294702 Probab=100.00 E-value=1.1e-210 Score=1171.76 Aligned_cols=773 Identities=25% Similarity=0.398 Sum_probs=654.6 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCC----ccCcEEEEEEeCCCce Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGAL----GQAPYIHLINRDEHEQ 76 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~----~~~~rl~~f~~~~~~~ 76 (794) ||+|+|+||||++|||||||.+|+|+||++|+||+|||+.||+||||++||+.|.+.... ....+||.++|++.++ T Consensus 1 M~~v~~si~nl~~GvSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRp~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~~~e~ 80 (976) T protein:vir:10 1 MASVTQTIPTLTGGLSQQPDELKIPGQVSVANNVIPDVTHGLLKRPGGKLVASISDNGTAALNSQTNGKWFSYYRDETES 80 (976) T ss_pred CcceeecchhhhCcceecchhhcCCchhhhhhccccccccccccCCcceeeeeecCCCcccccccccceEEEEEcCCCcE Confidence 999999999999999999999999999999999999999999999999999999875432 2346789999999999 Q ss_pred EEEEEeCC-ceEEEEc-CCeEEEEEcCccc----ceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCc Q lcl|Aclame:pro 77 YYAVFTGS-GIRVFDL-SGNEKQVRYPNGS----NYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQ 150 (794) Q Consensus 77 y~l~~~~~-~~rv~~~-~g~~~~v~~~~~~----~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~ 150 (794) |+++++.. .++||++ +|.+++|.++++. .++.+++++++|++++++|+|||+|++++|++..... ....+ T Consensus 81 y~~~~~~~g~~~v~~~~~G~~~~v~~~~~~~~~~~~yl~~~~~~~~~~~tv~d~tfi~N~~~~~~~~~~~~----~~~~~ 156 (976) T protein:vir:10 81 YIGQVSRSGDINMWRCSDGQAMTVNYDSGTATALTTYLTHTNDEDIQTLTLNDYTFLTNRTKTVAMSSTVE----PVRPP 156 (976) T ss_pred EEEEEecCCceEEEEccCCeEEEEEcCCCcccccchhhccCCcceeEEEEEccEEEEecCceEEeeccccc----CCCCc Confidence 99999854 6999998 8999999988753 2334567889999999999999999999998754433 34556 Q ss_pred cceEeecCCcCCceeEEEecCceEE---EEEee----------------------------------------------- Q lcl|Aclame:pro 151 DGLINVRGGQYGRELIVHINGKDVA---KYKIP----------------------------------------------- 180 (794) Q Consensus 151 ~~~~~v~~g~y~~~y~vti~~~~~~---t~tt~----------------------------------------------- 180 (794) .++++|++++|+++|+++|++...+ ++.++ T Consensus 157 ~~~~~v~~~~y~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~s~~~G~~~~~~~v 236 (976) T protein:vir:10 157 EVFIDLKATAYARQYAVNLFDNTTTTAVSTVTRIDVELIKSSNNYCDSNGAMVARTSRPSNSTRCDDSAGDGRDAYAPNV 236 (976) T ss_pred eEEEEeeeeccceEEEEEEcCCcccceeeeeeeeeeccccCCcccccccccchhhHhHhhhhhcccccccccccccCcee Confidence 7999999999999999999654311 11110 Q ss_pred --------cccC-------------------C-------c----------------------c----------------- Q lcl|Aclame:pro 181 --------DGSQ-------------------P-------E----------------------H----------------- 187 (794) Q Consensus 181 --------~~s~-------------------~-------~----------------------~----------------- 187 (794) ++.. . . . T Consensus 237 ~~~~f~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~Y~~~y~~~~~v~~~ 316 (976) T protein:vir:10 237 GTKVFNVTDGASLTDEANSGSYTYTIDVKDSSNNSVNRGVNLYFRIRTVGQSVPFTTGSGSSATTTYQARYTTTFDLLYG 316 (976) T ss_pred eeeEEEeccCccceEcCCcceEEEEeeccccceEEeecCCceEEEEccccceeecccccccceeeeeeEEEEeEEEEecC Confidence 0000 0 0 0 Q ss_pred -----------------------------------------------cccccchhhhhhhhhhhccc--ccceeEEECCc Q lcl|Aclame:pro 188 -----------------------------------------------VNNTDAQWLAEELAKQMRTN--LSDWTVNVGQG 218 (794) Q Consensus 188 -----------------------------------------------~~~s~~~~ia~~l~~~~~~~--~~~~tv~~~~~ 218 (794) .....+++++.+|...+.+. ..++++...++ T Consensus 317 ~~g~~~~~~~~V~v~g~~Y~it~~~~~~~~~~a~~~~~~~~~t~~d~~~~~~~~~ia~~L~~~l~a~~~~~g~tv~~~g~ 396 (976) T protein:vir:10 317 GTGWQEGDYFYVWMKDGYYKITVEAISTANVQANLGLIRPNPTPFDTETAVTAESIIGDIRTAIIATGNFTSANVQQIGT 396 (976) T ss_pred CCCcccCceEEEEccccceeeEEEEeeceeEEeccccccCcCCcCcccccccHHHHHHHHHHhhcccccccceEEEEcCc Confidence 00012345566666666543 36678888999 Q ss_pred eEEEEECCCCccceeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccC-----ceEEE Q lcl|Aclame:pro 219 FIHVTAPSGQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAER-----KVWTE 293 (794) Q Consensus 219 ~~~v~~~~~~~~~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~-----~~w~e 293 (794) .++++++++... .+.+ .+..+..+.++|+.+++||+.|++|++|+|.++. ++.|+||++|+... ++|+| T Consensus 397 ~~~i~~~~~~~~--~s~~---~~~~~~~~~~~V~~~~~LP~~~~~g~~v~V~~~~-~~~d~yyv~~~~~~~~~~~~~w~E 470 (976) T protein:vir:10 397 GLYVTRPSGTFN--VTAP---SSDLLRVMSGEVANVDDLPSQCKHGYVVKVANSE-ADADDYYVKFFGHNNRDGDGVWEE 470 (976) T ss_pred EEEEEecCcceE--ecCC---CceeEEEEEeeecchhhhhhhccCCcEEEEecCC-CCceeEEEEeeccccccccceEEE Confidence 999988887532 2222 2357889999999999999999999999995554 46799999998754 48999 Q ss_pred eecccceeeEecCcceEEEEEecCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeeecCCeEEEEccCC Q lcl|Aclame:pro 294 TLGWNTEDQVLWETMPHALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAK 373 (794) Q Consensus 294 ~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd 373 (794) |++|+..++++.+||||.|+++++++|++++++|+.|.|||+++||+|||+|++|++|+||||||+|++|++|||||+|| T Consensus 471 ~~~~g~~~g~~~~tmP~~l~~~~~g~f~~~~~~w~~r~vGd~~tnp~psf~g~~is~v~f~q~RL~f~s~~~v~~Srtgd 550 (976) T protein:vir:10 471 CAKPSRNIEFDKGTMPIQLVRQANGTFTVSQATWQNAEVGDELTNPNPSFVGKTINQLVFFRNRLVFLSDENVIMSRPGE 550 (976) T ss_pred eeccccccccccccccEEEEecccCeEEeeeccccccccCCcccCcCceecccccceEEEEcceEEEecCCeEEEEecCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccccccccccCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCC-CcccccceEEEEeeeecccCCCCcE Q lcl|Aclame:pro 374 YFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS-GTLTSKSVELNLTTQFDVQDRARPF 452 (794) Q Consensus 374 ~~nF~~~s~~~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~-~~lTP~~~~i~~~s~~~~~~~~~Pv 452 (794) ||||+++|++++.|||||++++++++++.|+|+++++++|+|||+++||+|+++ ++|||+|++++++|+|+|++.|+|+ T Consensus 551 ~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~e~~lsg~~~~lTP~t~~i~~~s~~~~~~~v~Pv 630 (976) T protein:vir:10 551 FFNFWSKTATTFTPQDVIDLSCSSTYPAIVYDGIQVNAGLLLFTKNQQFMLTTDSDILSPETAKINAVSSYNFNEKTHPV 630 (976) T ss_pred ccccccccccCCCCCccEEEEecCCcceeeEEEEecCCcEEEEecCceEEEecCCceecceeEEEEEEEeeeccCCCccE Confidence 999999999999999999999999999999999999999999999999999985 5999999999999999999999999 Q ss_pred EeCCeEEEEecCCCeEEEEEEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecC Q lcl|Aclame:pro 453 GIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLN 532 (794) Q Consensus 453 ~vg~~v~fv~~~g~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~ 532 (794) .+|++++|+|++|+++|++||.+..+ .++|++.|||+|++|||+|++.. ++++++|.+++|+++++|+|++|+|||++ T Consensus 631 ~vG~~v~Fv~~~g~~~r~~~~~~~~~-~~~~~~~dlt~~~~~l~~g~~~~-~a~~~~~~~vv~~~~~~g~l~~~ty~~~~ 708 (976) T protein:vir:10 631 SLGTTVAFIDNANQFTRFFEMSNVVR-QGEPDVVDQSKVISRLLDKNISL-VSVSRENSVVFFSQKDTDKIYCFRYFTSG 708 (976) T ss_pred EeCCeEEEEecCCCeEEEEEEeeccc-ccccchhHHHHHhhhhcCCceEE-EEEcCCCcEEEEEEcCCCEEEEEEEeecC Confidence 99999999999999999999987665 45799999999999999997755 56677888889999999999999999999 Q ss_pred CceeEEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeeccccC------------CCCccceeeeeeeEE Q lcl|Aclame:pro 533 EELRQQSWSHWDFGENVQVLACQSISSDMYVILRNEFNTFLARISFTKNAIDL------------QGEPYRAFMDMKIRY 600 (794) Q Consensus 533 ~e~~v~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~------------~~~~~~~~lD~~~~~ 600 (794) +||+|+|||||+|+|+++++|+ .+|+||++|+|+++++++||.|++++... ..+.+.+|||++.++ T Consensus 709 ~eq~v~aWsr~~~~G~v~sv~~--i~D~ly~vV~r~~~g~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~ 786 (976) T protein:vir:10 709 EKRLLQAWTTWTITGNIQYHCM--LDDALYVVTRNNNKDQIVKYSLKLDDAGHFVTDTQGTTSTDDDSIYRVHLDHSSSV 786 (976) T ss_pred CceeEEeeEEEecCCcEEEEEE--eCCeEEEEEEecCCeEEEEEEEEECCccceeeeccCccccccCCcceeeeccceEE Confidence 9999999999999999887665 58999999999999999999999876421 134457899999999 Q ss_pred eecCcceeccceeeEEEcccccCCcccceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecC Q lcl|Aclame:pro 601 TIPSGTYNDDTFTTSIHIPTIYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFS 680 (794) Q Consensus 601 ~~~~~t~~~~~~~t~~~~~~~~g~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~ 680 (794) .+.+++|+.++..+++.+|+..+ ++++.+...+++........ ..+...+.++|++++++++|||||+|+++++++ T Consensus 787 ~~~~~t~~~~t~~t~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~-~~~v~g~~i~l~g~~~~~~v~VGl~Y~s~~~~~ 862 (976) T protein:vir:10 787 TAASNTYNTTTIKTTIPKPNGYE---STKQLVAYDTDAGNDLGRYA-LVTVSGSNLEIPGNWSNNSFIIGYLYEMDVQLP 862 (976) T ss_pred EeccccccCCceeEEeecCcccc---CceeEEEEecccCcccccce-eeeecCCeeEecCCCCCCeEEEeeeeEEEEeec Confidence 99999999999999999998765 56777888888765332221 122233578999999999999999999999999 Q ss_pred ceeEeccCCccceeeeeeccEEEEEEEEEeeccceEEEEEccCCCcc-eeeecCceecccccccCccccccc-eEEEEec Q lcl|Aclame:pro 681 KFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSNW-KYTMAGARLGSNTLRAGRLNLGTG-QYRFPVV 758 (794) Q Consensus 681 ~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~~tg~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~tg-~~~vp~~ 758 (794) ||++++++|+++. +...+||+|||++++|.+||.|.+.+++.+++. .......+. .....+.+|+.++ .++||+. T Consensus 863 ~~~i~~~~g~~~~-~~~~gRl~i~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~--~~~~~~~~pl~~~~~~~vP~~ 939 (976) T protein:vir:10 863 TLYVTQQVGDKYR-SDAKSSLIVHRIKFSFGPLGVYSTTIQRDGKPDFTETKELGLA--GVVGASRLPIVPEVIETVPCY 939 (976) T ss_pred ceeEEeCCCCccc-ccceeeEEEEEEEEEeecccceEEEEcCCCCcccccccccccc--CcccccccceecCcEEEEEec Confidence 9999999887644 577899999999999999999999999877653 333322222 2334455666654 5789999 Q ss_pred cccceEEEEEEECCcCCEEEEEEEEEEEEecc-ccCC Q lcl|Aclame:pro 759 GNAKFNTVYILSDETTPLNIIGCGWEGNYLRR-SSGI 794 (794) Q Consensus 759 ~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r-~rrv 794 (794) +|+++.+|+|+|++|+||+||+|+|||+||+| +||| T Consensus 940 ~~~~~~~v~i~~d~PlP~tilsi~~eg~yn~r~~r~~ 976 (976) T protein:vir:10 940 ERNTNLKVNVKSEHPAPATLYSLAWEGDFTNRFYKRV 976 (976) T ss_pred cCCceeEEEEEECCCCceEEEEEEEEEEeccceeecC Confidence 99999999999999999999999999999999 6667 No 16 >protein:vir:78957 Length: 826 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1860 # MgeName: LKD16 # Cross-refs: genbank:acc:YP_001522826;genbank:gi:158345061;genbank:GeneID:5687447 Probab=100.00 E-value=8.4e-210 Score=1166.81 Aligned_cols=771 Identities=22% Similarity=0.313 Sum_probs=619.8 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeC-CCceEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRD-EHEQYYA 79 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~-~~~~y~l 79 (794) ||+|+|+||||++|||||+|++|||+||++|+||+|+|+|||+||||++||++++++.........|.++|+ .+|+|+| T Consensus 1 M~~i~~~~~nl~gGvSqq~d~~r~~~q~~~~~N~~~~~~gG~~rRpgt~~va~~~~~~~~~~~~f~~~~~r~s~e~~~~l 80 (826) T protein:vir:78 1 MSYKQSAYPNLLMGVSQQVAFERLPGQLSEQINMVSDPVSGLRRRSGIELMASLLHTDQPWPRPYLYHTNLGGRSIAMLV 80 (826) T ss_pred CcceeeecchhccceecccchHhhhhhhhhhhcceeccccccccCCchHhhhhhccCCcCCceeEEEEeccCCcceEEEE Confidence 999999999999999999999999999999999999999999999999999999876532222222333344 4677899 Q ss_pred EEeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecCC Q lcl|Aclame:pro 80 VFTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGG 159 (794) Q Consensus 80 ~~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g 159 (794) +|++++||||++.+.+..+..+....|+.++ +..+|+++|+||+|||+|++++|++....... .++..+++++++++ T Consensus 81 ~~~~g~irv~~~~~g~~~~~~~~~~~y~~~~-~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~~~--~~~~~~~~~~v~~g 157 (826) T protein:vir:78 81 AQHRGELYLFDEKDGRLLMGQPLVHDYLKAS-DYRQLRAATVADDLFIANLEVRPEADKADVLG--VDPSKTGWLYIKAG 157 (826) T ss_pred EEcCCcEEEEECCCCEEEEecCcccceeecC-CcceeEEEEEcCEEEEEcCcEeeeeccccccC--CCCCceEEEEeccc Confidence 9999999999876555555555566666554 55689999999999999999999875444332 34456799999999 Q ss_pred cCCceeEEEecCce---------EEEEEeecccCCc-----ccccccchhhhhhhhhhhcccccceeEEE---------- Q lcl|Aclame:pro 160 QYGRELIVHINGKD---------VAKYKIPDGSQPE-----HVNNTDAQWLAEELAKQMRTNLSDWTVNV---------- 215 (794) Q Consensus 160 ~y~~~y~vti~~~~---------~~t~tt~~~s~~~-----~~~~s~~~~ia~~l~~~~~~~~~~~tv~~---------- 215 (794) +|+++|.+++++.+ +++++++++..+. ....+...|++.+|....... ..|.... T Consensus 158 ~y~~~y~v~i~~~~~~~~~~~s~t~~y~t~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~-~~~~~~~~t~~~~~~~~ 236 (826) T protein:vir:78 158 QYSKAFSLTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLFGKFFGA-PEYTLPNSTKKYPKVDP 236 (826) T ss_pred ccCceeEEEeccceeecccccceeEEEEeccCCccccccccccceecchhhheecceeeccc-cceeeeccceeEeeccc Confidence 99999999998643 3567777765432 223345667777776543211 1111100 Q ss_pred ----------------CCceEEEEECCCCccceeEeecccCcceeeeEEEEeeeeeeecc----ccCCCeEEE----EEc Q lcl|Aclame:pro 216 ----------------GQGFIHVTAPSGQQIDSFTTKDGYADQLINPVTHYAQSFSKLPP----NAPNGYMVK----IVG 271 (794) Q Consensus 216 ----------------~~~~~~v~~~~~~~~~~~~~~dg~~~t~~~~~~~~v~~~~~l~~----~~~~g~~v~----i~~ 271 (794) .+.++++.+.++... ..+.+++.+........+++.+.+||+ .+.+|+.+. +.. T Consensus 237 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~v~~~~~l~a~~p~~~~~~~~~~~~~~~~~ 314 (826) T protein:vir:78 237 DPAAATVAGYLNQRGVQDGYIAFRGDGDIVV--EVSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGTGVQFMDGAIM 314 (826) T ss_pred cccceeeccceeecccccceEEEecCCCeEE--EeccCCCccceEEEeeEEEecccceeeeecccccceEEEEEEeeeEe Confidence 112233333222221 123334445555566677888877754 455565554 445 Q ss_pred CCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEEEEE-ecCCceEEeeccccccccCCcccccCchhcCCCceE Q lcl|Aclame:pro 272 DASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVR-AADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSIND 350 (794) Q Consensus 272 ~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~-~~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~ 350 (794) ..++..++||++++...++|+||++||+. ++.+||||+|++ .++++|+++..+|++|.+||+++||+|||+|++|++ T Consensus 315 ~~g~~~~~~y~~~~~~~~~w~e~a~~g~~--~~~~tmp~~l~~~~~~~~f~~~~~~w~~r~~gd~~tnp~psf~g~~i~~ 392 (826) T protein:vir:78 315 ATGSTKAPVYFAWDAANRRWAERAAYGTD--WVLKKMPLALRWDESTDTYSLNELEYDRRGSGDEETNPTFNFVKRGITG 392 (826) T ss_pred cCCCcccceeEEEEcCCceEEEeeccCcc--cccccccEEEEEecCCCeEEEeeccccccccCcccccCcccccCCCceE Confidence 55677889999999999999999999974 678899999985 578999999999999999999999999999999999 Q ss_pred EEEEccceeeecCCeEEEEccCCcccccccccccCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCCCcc Q lcl|Aclame:pro 351 VFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTL 430 (794) Q Consensus 351 v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~l 430 (794) |+||||||+|++|++|||||+|||+||+++|++++.|||||++++++++++.|+|+++++++|+|||+++||+|+|+++| T Consensus 393 v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~~s~~~~~i~~~v~~~~~L~l~T~~~e~~l~~~~~l 472 (826) T protein:vir:78 393 MTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIV 472 (826) T ss_pred EEEEeceEEEeeCCeEEEEeccCccccccccccCCCCCCcEEEEEccCcceeEEEEEecCCcEEEEecCcEEEEeCCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred cccceEEEEeeeecccCCCCcEEeCCeEEEEecCC-CeEEEEEEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCC Q lcl|Aclame:pro 431 TSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRS-SFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTE 509 (794) Q Consensus 431 TP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g-~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~ 509 (794) ||+|++++++|+|+|+++|+|+.+|++++|++++| +|++++||++..+.++.|+++|||+|++|||++++..++++++| T Consensus 473 TP~~~~~~~~s~~~~~~~~~Pv~vG~~v~F~~~r~~~~s~v~e~~~~~~~~~~y~~~dlt~~~~~l~~~~v~~~a~s~~~ 552 (826) T protein:vir:78 473 TPRTAVISITTQYDVDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASS 552 (826) T ss_pred cceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeecccCccchHHHHHHHHHhcCCCeEEEEEeCCC Confidence 99999999999999999999999999999998877 58999999998888888999999999999999999888888877 Q ss_pred CeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeec-cccCCC- Q lcl|Aclame:pro 510 NFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSDMYVILRNEFNTFLARISFTKN-AIDLQG- 587 (794) Q Consensus 510 ~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~-~~~~~~- 587 (794) +.+ +|+++++|+|++|+|||+++||+|+|||||+|+|+++++|+ .+|+||++|+|+++++++||.+... +....+ T Consensus 553 ~~~-v~~~~~~g~l~~~ty~~~~~e~~v~aW~~~~~~g~v~~v~~--i~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~ 629 (826) T protein:vir:78 553 GYL-VFGTSAADEMICHQYLWQGNEKVQNAYHRWTLRHQIIGAYF--TGDNLMVLIQKGQEIALGRMHLNSLPAREGLQY 629 (826) T ss_pred CeE-EEEEcCCCeEEEEEEEecCCcEEEEeEEEEccCCcEEEEEE--ECCeEEEEEEeCCCEEEEEEEEEecCCCccccc Confidence 765 68999999999999999999999999999999998876554 5899999999999999999955443 322111 Q ss_pred CccceeeeeeeEEeecCcceeccceeeEEEcccccCCcccceEEEEEecCCceecceeeeccccccceEEEcccccCCeE Q lcl|Aclame:pro 588 EPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMV 667 (794) Q Consensus 588 ~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v 667 (794) ....+++++...+.+.. ++...+ -..++...+..+++++.+....++.+.. ...+.+.+++++|+++++++| T Consensus 630 ~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~v 701 (826) T protein:vir:78 630 PKYDYWRRIEATVDGEL-ELTKQH---WDLIKDGAAVYQLQPQVGAYMERYQLGV----KRETSTKVFLDVPEAVVGSVY 701 (826) T ss_pred cccceeEEEEEEEccee-ccccce---eEEecCCceeeeeccceeeeccccceec----cccCCCceEEEeCCCccccEE Confidence 11234555554443211 111111 1123344456677777776666665432 223344567899999999999 Q ss_pred EEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEEeeccceEEEEEccCCCcc--eeeecCceecccccccCc Q lcl|Aclame:pro 668 YIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSNW--KYTMAGARLGSNTLRAGR 745 (794) Q Consensus 668 ~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~~tg~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~ 745 (794) +|||+|+++++++||++++++|+.++ .+|+||||++++++++|.|.+.|++..++. .+...+.++....+..++ T Consensus 702 ~VGl~y~s~~~~~~~~~~~~~g~~~~----~~r~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~l~~g~ 777 (826) T protein:vir:78 702 VVGCEFWSKVEFTPPVLRDHNGLPMT----STRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLSSRQLNAGE 777 (826) T ss_pred EEeeceeEEEEeCceEEecCCCccee----ecceEEEEEEEEeeccccEEEEeCCCccCcceeeeecccccccccccCCc Confidence 99999999999999999999987543 479999999999999999999999887753 355666777777777888 Q ss_pred cccccceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 746 LNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRSSGI 794 (794) Q Consensus 746 ~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r~rrv 794 (794) |...++.+++|+.+++++.+|+|+++.|+||+|++|+|||+||+|+||| T Consensus 778 ~~~~t~~v~vp~~~~~~~~~i~i~~d~P~P~tvlai~~~~~y~~r~rrv 826 (826) T protein:vir:78 778 PLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV 826 (826) T ss_pred ccccceEEEEeeeccCceEEEEEEeCCCCcEEEEEEeEEEEecceeecC Confidence 8888999999999999999999999999999999999999999999999 No 17 >protein:vir:78703 Length: 905 # NCBI annotation: tail tube B # Family: family:all:825 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285450;genbank:gi:148724484;genbank:GeneID:5220174 Probab=100.00 E-value=7.3e-206 Score=1145.22 Aligned_cols=767 Identities=25% Similarity=0.417 Sum_probs=643.7 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~~y~l~ 80 (794) ||+|+|+||||++|||||||.+|+|+||++|+||+|||+.||+||||++||+.|.++ +..+.++|.|+|++.|+|++. T Consensus 1 M~~v~~si~nl~~GvSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRp~~~~i~~l~~~--~~~~~~~~~~~r~~~e~y~~~ 78 (905) T protein:vir:78 1 MGAVLQKIPNLLGGVSQQPDPVKLPGQVREAENVYLDPTFGCRKRPATKFVGELATN--LPSDTRWFPIFRDAGERYAVA 78 (905) T ss_pred CccceecchhhhCceeecchhhcCCcchhhhhccccccccccccCchhhhhhhhcCC--CCCCceEEEEEeCCCceEEEE Confidence 999999999999999999999999999999999999999999999999999999765 456789999999999999999 Q ss_pred EeCCc-----eEEEEc-CCeEEEEEcCc-ccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccce Q lcl|Aclame:pro 81 FTGSG-----IRVFDL-SGNEKQVRYPN-GSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGL 153 (794) Q Consensus 81 ~~~~~-----~rv~~~-~g~~~~v~~~~-~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~ 153 (794) ++..+ ||||++ +|.+++|.... ...|+. +.+.++|++++++|++||+|++++|++.... .....++++ T Consensus 79 ~~~~g~~~~~i~v~d~~~G~~~~V~~~~~~~~yl~-~~~~~~l~~~tv~d~tfi~N~~~~~~~~~~~----~~~~~~~~~ 153 (905) T protein:vir:78 79 LYKDGSGNTQVRVWDMQTGAERTVTPDATATAYLA-TTNLNNLNWLTVADYTLLSNKERIVTMSGAS----EVDSNQRAL 153 (905) T ss_pred EeeCCCCCcceEEEEccCCcEEEEecCCCccceee-cCCCcceEEEEEcCEEEEEcCceeeeecCCC----CcCCCCeEE Confidence 97544 999998 89999999854 466665 5568899999999999999999999874333 346677899 Q ss_pred EeecCCcCCceeEEEecCceEEEEEe---eccc----------------------------------------------- Q lcl|Aclame:pro 154 INVRGGQYGRELIVHINGKDVAKYKI---PDGS----------------------------------------------- 183 (794) Q Consensus 154 ~~v~~g~y~~~y~vti~~~~~~t~tt---~~~s----------------------------------------------- 183 (794) ++|++++|+++|.++|++.......+ +.+. T Consensus 154 ~~v~~g~y~r~y~v~I~~~~~~~~~t~~~~~a~~~s~~s~~~~~~g~~~~~~~~~~~~~t~~~~~~l~f~~~~~~~~~~~ 233 (905) T protein:vir:78 154 VEINAISYNTTYSIDLDRDGASQQVKVYRAKALEISPGSFEVEDGGVCTEHDVQNYTNQTIGSSTGLAFQVRVQCAAYLE 233 (905) T ss_pred EEEEeeccceeEEEEEeCCCCceeeeeeccccceeccccccccccccccccceeeeecceeeccCCceeEEeeccccccC Confidence 99999999999999998753211100 0000 Q ss_pred ----------CC--------------------------------------------cc------cccccchhhhhhhhhh Q lcl|Aclame:pro 184 ----------QP--------------------------------------------EH------VNNTDAQWLAEELAKQ 203 (794) Q Consensus 184 ----------~~--------------------------------------------~~------~~~s~~~~ia~~l~~~ 203 (794) +. .. .......+|+.+|.++ T Consensus 234 ~~~~~~~~~~~~~l~~g~~~~~~~~~~~v~~~g~~y~i~i~~~~~~~~~~~~~~~~~~t~~d~~a~~~~~~~i~~~l~~~ 313 (905) T protein:vir:78 234 NNEYRSRYNVSVVLQNGGTGFRKGDMITVNLNGRDYNIRVTQEEFVYTYASDGTAAHTTPQDSTAGTLDIGQITAGLVNS 313 (905) T ss_pred CCcccccccceeeeeccccccccCccEEEeeccceEEEEEecceeEEEecCCCcccccCccCccCccccHHHHHHHHHHh Confidence 00 00 0001124566666666 Q ss_pred hcccccceeEEECCceEEEEECCCCccceeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEE Q lcl|Aclame:pro 204 MRTNLSDWTVNVGQGFIHVTAPSGQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVR 283 (794) Q Consensus 204 ~~~~~~~~tv~~~~~~~~v~~~~~~~~~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~ 283 (794) +.. .+.|++...++.++|.+.++..+ .+++++|+.++.+.++.++++.+++||++|++|+.|+++++.+.+.|+|||+ T Consensus 314 ~~~-~~~~~~~~~g~~i~v~~~~~~~~-~~~~~~g~~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~~~~~~d~yyv~ 391 (905) T protein:vir:78 314 VNL-ISNYSAQAVGNVIEIERTDGRDF-NLGVRGGATNRAMTAIKGTANSIVDLPGQCFDGFELKVINTENAESDDYYVV 391 (905) T ss_pred hcc-cccEEEEecCcEEEEEecCCCcc-EEEEeccCCcceEEEEeccccccccCccccCCCcEEEEEeCCCCCcceEEEE Confidence 643 67889999999999999998765 4789999999999999999999999999999999999999999999999999 Q ss_pred Eecc------CceEEEeecccceeeEecCcceEEEEEecCCceEEeecc-------ccccccCCcccccCchhcCCCceE Q lcl|Aclame:pro 284 YDAE------RKVWTETLGWNTEDQVLWETMPHALVRAADGNFDFKWLE-------WSPKSCGDVDTNPWPSFVGSSIND 350 (794) Q Consensus 284 ~~~~------~~~w~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~-------w~~r~~gd~~s~p~psf~g~~p~~ 350 (794) |+.. +++|+||++|++..+++.+||||.|++.++|+|++...+ |.+|.+||+++||+|||+|++|++ T Consensus 392 ~~~~~~~~~~~~~W~E~~~~~~~~~~~~~tmp~~l~r~~~g~f~~~~~~~~~~~~~~~~r~~Gd~~Tnp~psf~g~~is~ 471 (905) T protein:vir:78 392 FRSAAEGIPGSGSWEETVAPGIERGFNTSTMPHALIRQADGNFTLEALNDEGTITGWAQREVGDDDTNPKPSFVGRGISD 471 (905) T ss_pred EEecccCCcCceeEEEecccccccccccccccEEEEEecCceEEEEEeccccccccccccccCCcccCCCCcccCCCcce Confidence 9864 458999999999999999999999999999999999987 999999999999999999999999 Q ss_pred EEEEccceeeecCCeEEEEccCCcccccccccccCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCCC-c Q lcl|Aclame:pro 351 VFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASG-T 429 (794) Q Consensus 351 v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~-~ 429 (794) |+||||||+|++|++|||||+||||||+++|++++.|||||+++++++++++|+|+++++++|+|||+++||+|++++ + T Consensus 472 v~f~q~RL~f~s~~~v~~Srtgd~~nF~~~t~~~~~DdDpI~~~~ss~~~~~i~~~v~~~~~L~ifT~g~ef~lsg~~~~ 551 (905) T protein:vir:78 472 MFFYNNRLGFLSEDAVIMSQPGDYFNFFVTSAITISDSDPIDVTASSTKPAILRAAIGAPKGLILFAENSQFLLASQEVV 551 (905) T ss_pred EEEEcceEEEecCCeEEEEccCCccccccccccCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCceEEEecCCcc Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999865 7 Q ss_pred ccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCC Q lcl|Aclame:pro 430 LTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTE 509 (794) Q Consensus 430 lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~ 509 (794) |||+|++++++|.|+|+++|+|+.+|++++|+|++|+|++++||.+. +.+++|.+.|+|+|++|||++++.+++. +.| T Consensus 552 lTP~s~~i~~~S~~~~~~~v~Pv~vG~~vlFv~~~g~~s~vre~~y~-~~~d~y~a~DlT~~a~hl~~g~v~~~~~-s~~ 629 (905) T protein:vir:78 552 FSTATIKLTEISDYFYRSLAKPVSTGVSIAFVSEADTYSKIFEMSID-SVDNRPQVADITRIVPEYVPTGLTWSVS-TPN 629 (905) T ss_pred ccceeEEEEeEEeecccCCCCcEEeCCeEEEeecCCCeeEEEEEEee-ecccceehhHHHHHHHHhcCCceEEEEe-cCC Confidence 99999999999999999999999999999999999999999998764 4678899999999999999999876554 344 Q ss_pred CeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeecccc---CC Q lcl|Aclame:pro 510 NFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSDMYVILRNEFNTFLARISFTKNAID---LQ 586 (794) Q Consensus 510 ~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~---~~ 586 (794) +. ++|+.+++++|++|+|||+++||+|+|||||+|+|.++++|+. .|++|++|+|..++...++.+.+.... .. T Consensus 630 ~~-~v~~~~~~~~l~~ytyl~~~~eq~v~AWsrw~~~G~~~~~a~i--~d~~~~vV~r~~~G~~~~~~~~l~~~~~~~~~ 706 (905) T protein:vir:78 630 NS-MMLFGDNSNTAYIFKFFNQGNERQVAGWSKWILPGEQRMCGFF--ADTGYFVLYDSTTGSYVLSAMELLDDPDSASI 706 (905) T ss_pred Cc-EEEEEcCCCeEEEEEeecCCCceeEEeEEEEecCCCeEEEEEE--cCCEEEEEEEccCCeEEEEEEeeccccCcccc Confidence 44 5677899999999999999999999999999999999876554 578999999988888877777663211 11 Q ss_pred CCccceeeeeeeEEeecC-cceeccceeeEEEcccccCCcccceEEEEEecCCceecce-eee-ccccccceEEEccccc Q lcl|Aclame:pro 587 GEPYRAFMDMKIRYTIPS-GTYNDDTFTTSIHIPTIYGANFGRGKITVLEPDGKITVFE-QPT-AGWNSDPWLRLSGNLE 663 (794) Q Consensus 587 ~~~~~~~lD~~~~~~~~~-~t~~~~~~~t~~~~~~~~g~~~~~~~~v~~~~~g~~~~~~-~~~-~~~~~~~~~~i~~~~~ 663 (794) +....+++||...|.... .++.... ......+...++.|+++..++..+||...... ++. .++ .+++ .. T Consensus 707 d~~~~~~~~~~d~~~~~~~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~~~~~~~----~~t~---~~ 778 (905) T protein:vir:78 707 DTAFSSFLPRLDNYVVKSDLTVVDNG-DGTLTVDLEAGQAMTGATPVIMFTDGPSEFAFSQPTITAG----QFTV---DT 778 (905) T ss_pred ccceeeeeeccceeeecccceecccC-cceEeeeccCccccccceeEEEeeCCceeeeEEEEEeece----eecc---cc Confidence 222345566555554432 2222211 11223333456778888888888898764322 222 121 1222 24 Q ss_pred CCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEEeeccceEEEEEccCCCcceeeecCceeccccccc Q lcl|Aclame:pro 664 GRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRA 743 (794) Q Consensus 664 ~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 743 (794) +++|+|||+|+++++++|++++.+++.++ .+|++|+|+.|+|++||+|.+++++.+++.+....+.++....+.. T Consensus 779 a~~v~VGl~Y~s~v~~~p~~~~~~~~s~~-----~~~~rI~rv~lr~~~Sg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~ 853 (905) T protein:vir:78 779 TDDFVVGFKYETKITLPGFFTSEENKADR-----VYAPIVEFLYLDLYYSGRYQIEVDRIGYDTINIDAGSIDANIYLAD 853 (905) T ss_pred CCeEEEeeeeeEEEeecceEeccCCCccc-----ccceEEEEEEEEeecceeEEEEEcCCCcceecccccceecCcccCc Confidence 67899999999999999999988776544 3588999999999999999999999988877666666777777778 Q ss_pred CccccccceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEecc-ccCC Q lcl|Aclame:pro 744 GRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRR-SSGI 794 (794) Q Consensus 744 ~~~~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r-~rrv 794 (794) +.|++.+|.++||+.+|+++.+|+|+|++|+||+|+||+|||+||+| ++|| T Consensus 854 ~~p~~~tg~~~vP~~g~~~~~~v~I~sd~PlP~tvlsi~weg~Yn~r~~~~~ 905 (905) T protein:vir:78 854 GAPLKEIATENVPLFTPGDQVTVTIKAPDPFPSAITGYSWQGHYNRRGIAFI 905 (905) T ss_pred ccccccccEEEEEeeccCceeEEEEEECCCCcEEEEEEEEEEEeccceeecC Confidence 88888999999999999999999999999999999999999999999 6677 No 18 >protein:vir:103790 Length: 768 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024932;genbank:gi:48697202;genbank:GeneID:2846114 Probab=100.00 E-value=2.7e-174 Score=972.17 Aligned_cols=732 Identities=14% Similarity=0.114 Sum_probs=549.6 Q ss_pred Cceeeeechhhhcc-----cccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHE 75 (794) Q Consensus 1 Ma~v~~~~~s~~~G-----vS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~ 75 (794) ||+++++++||.+| +++|+|++||++||++|+||+++|+|||+||||++||++++++ +.++|||||.|+++| T Consensus 1 M~~~~~~~~~F~~GelsP~l~~r~Dl~ry~~~~~~~~N~~~~~~gGl~rRpGt~fv~~~~~~---~~~~~lipf~~~~~~ 77 (768) T protein:vir:10 1 MPKAAPQQVSFDAGELSPLLGARVDLAKYPNGCQVMENFIATVQGPAIRRGGKRFVAATKDS---TKQSWLLPFIVADGI 77 (768) T ss_pred CCcceeeeeeccCceechhhcccchHHHHHHHHhhhhcceeeecCCceecCchhhhhhhcCC---CCCeeEEEEEecCcc Confidence 99999999999999 8999999999999999999999999999999999999998764 357899999999999 Q ss_pred eEEEEEeCCceEEEEcCCeEE------EEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCC Q lcl|Aclame:pro 76 QYYAVFTGSGIRVFDLSGNEK------QVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPN 149 (794) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~------~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~ 149 (794) +|+|||++++||||+.+|.+. .+..|+...|+.+.+.+.+|+++|+||+|||+|++|||+++.+.++ +.|... T Consensus 78 ~y~l~fg~~~irv~~~~g~v~~~~~~~e~~tp~~~~~l~~~~~~~~L~~~q~aD~~~i~~~~~~p~~l~r~~~-~~w~l~ 156 (768) T protein:vir:10 78 AYMLEFGDHYIRFFVNRGQLVNAGAPVEIATPYALADLTTEDGTFAIRATQSADTMYLFHGGYPTQKLLRTSA-TTFSLQ 156 (768) T ss_pred EEEEEEcCCEEEEEECCcEEEecCeeEEEEcCCCcceeecccccceeEEEeecCEEEEEcCCcceeEEEEecC-CCceeE Confidence 999999999999999877543 4566778888888888899999999999999999999999887765 667777 Q ss_pred ccceEeecCCcCCceeEEEecCceE-EEEEeecccCCcccccccchhhhhhhhhhh--cccccceeEEECCceEEEEECC Q lcl|Aclame:pro 150 QDGLINVRGGQYGRELIVHINGKDV-AKYKIPDGSQPEHVNNTDAQWLAEELAKQM--RTNLSDWTVNVGQGFIHVTAPS 226 (794) Q Consensus 150 ~~~~~~v~~g~y~~~y~vti~~~~~-~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~--~~~~~~~tv~~~~~~~~v~~~~ 226 (794) +..+...+.+.++...+++++.... ...+..+.. +...+.++...+.... .....+|..........+...+ T Consensus 157 ~~~~~~gp~~~~n~~~~vti~~s~~~~~~T~tasa-----~~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 231 (768) T protein:vir:10 157 PVTFVGGPFAAVNSDNNVRVHASAGTGAVTLVASA-----SVFRPSDVGTLFYLEQEDNSFVKPWVVHQKIGPSELRRVG 231 (768) T ss_pred EeeecCccccccccceeEEEEecccceeEEEeecC-----CccchhhcceeeeeeeeccccccccEEEEeeeeEEEEecC Confidence 6665554444444444444432211 111111111 1122223222211111 1112344433333333333444 Q ss_pred CCccceeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcce-----EEEEEeccCceEEEeeccccee Q lcl|Aclame:pro 227 GQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQ-----YYVRYDAERKVWTETLGWNTED 301 (794) Q Consensus 227 ~~~~~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~-----yyv~~~~~~~~w~e~~~~~~~~ 301 (794) +.......+.++..+. .-.+++.+..|....+.+......+. ..+++..... +..... T Consensus 232 ~~~~~~~~~~~~~~~~-----------~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~ 294 (768) T protein:vir:10 232 DRVYLCTAVGTATPQV-----------TGTETPTHTSGSRWDGTGQDESATDEYGSIGAEWEYQHSGY------GTVLIT 294 (768) T ss_pred CceEEeeeeccccccc-----------cceeccccccCceEEEecCcccccccccccceEEEEEEcCC------ceEEEE Confidence 4333333333222110 01123334445544444443322111 1122222221 233455 Q ss_pred eEecCcceEEEEEecCCceEEeeccccccccCC-cccccCchhcCCCceEEEEEccceeeecCCeEEEEccCCccccccc Q lcl|Aclame:pro 302 QVLWETMPHALVRAADGNFDFKWLEWSPKSCGD-VDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPA 380 (794) Q Consensus 302 ~~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd-~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~ 380 (794) ++.+.+|++.+++...+++.....+|.....+. +.....|+-.++||++|+||||||+|++|++|||||+|||+||+++ T Consensus 295 ~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g~Ps~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~ 374 (768) T protein:vir:10 295 GYTNDQVVTGTVATNDPADPGMLPNTVVTLTGTYKWARSLFNSTDGFPQMGTFWRNRLCLMRDRWLAMSVSADFETFKTK 374 (768) T ss_pred EecCCeeEEeeeeeecCcccccccccccccCCCcccccCCCcCCCCCceEEEEEeeeEEEeeCCEEEEEccccccccccc Confidence 667888999988887777666555544433332 3334445556678889999999999999999999999999999999 Q ss_pred ccccCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCC---CcccccceEEEEeeeecccCCCCcEEeCCe Q lcl|Aclame:pro 381 SIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS---GTLTSKSVELNLTTQFDVQDRARPFGIGRN 457 (794) Q Consensus 381 s~~~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~---~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~ 457 (794) +++++.|||||+++++++++++|+|++++ ++|+|||+++||+|+++ ++|||+|++++++|.|+++ +|+|+.+|++ T Consensus 375 s~~~~~DdD~I~~~~ss~~~~~i~~~v~~-~~L~i~T~~~q~~l~~~~~~~~lTP~~~~i~~~s~~g~~-~~~Pv~vG~~ 452 (768) T protein:vir:10 375 DADQQTDDSAIVQQLNARQLNKLAWMVES-DSLLIGMTGDEWVIGPANASQPVSAANLNAARRTSYGSK-RIQPVQVGGT 452 (768) T ss_pred ccccccCCccEEEEecCCcceeEEEEeec-CcEEEEecCceEEEecCCCCcccccceEEEEEeehhccc-ccccEEeCCe Confidence 99999999999999999999999999998 58999999999999873 5899999999999999775 7999999999 Q ss_pred EEEEecCCCeEEEEEEeeeeccccceehhHHHHHHHHhcCCCc-----EEEEEcCCCCeEEEEEEcCCCeEEEEEeEecC Q lcl|Aclame:pro 458 VYFASPRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGV-----FSICGSGTENFCSVLSHGDPSKIFMYKFLYLN 532 (794) Q Consensus 458 v~fv~~~g~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~ 532 (794) ++|+|++|+ +++||.+ ++.+++|.++|+|+|++||+++.. +..+++++.|..++||+++||+|++|+|++++ T Consensus 453 v~fv~~~g~--~vre~~y-~~~~d~y~a~DlT~~a~hl~~~~~~~~~~i~~~a~~~~p~~v~~~v~~dg~l~~~ty~~e~ 529 (768) T protein:vir:10 453 IMFVQKAGR--KLRDFKY-DFSSDNYVSTDVTKIADHITRGRAGTNSGIMSLCFQQEPHSVVWAARADGQLIGCTYDEEA 529 (768) T ss_pred EEEEcCCCC--EEEEEEe-eeecCceecchhhhhhhhhccccCccccceeeEEEeecCCeEEEEEecCCeEEEEEEecCC Confidence 999999996 4666655 456889999999999999998753 33344445566667999999999999999888 Q ss_pred CceeEEeEEeeec-CCCeEEEEE----EEcCCEEEEEEEeCCCEEEEEEEEeeccc--cCCCCccceeeeeeeEEeecCc Q lcl|Aclame:pro 533 EELRQQSWSHWDF-GENVQVLAC----QSISSDMYVILRNEFNTFLARISFTKNAI--DLQGEPYRAFMDMKIRYTIPSG 605 (794) Q Consensus 533 ~e~~v~aW~~w~~-~g~~~~~~~----~~~~d~ly~vv~r~~~~~~~~~~~~~~~~--~~~~~~~~~~lD~~~~~~~~~~ 605 (794) ++|+|+|||||++ +|.++++|+ .+.+|+||++|+|+++++.+|++|++++. .....++++||||+++|.+.. T Consensus 530 ~~q~v~aW~~~~~~~g~v~~v~~i~~~~g~~d~l~~~v~r~~~g~~~~~ie~l~~~~~~~~~~~~~~~~D~~~~~~~~~- 608 (768) T protein:vir:10 530 GRSDVYGWHRHPDANGFVECVASMPAPDGASDDLWVIVRRQVNGQTVRYVEYLNPALQDDEPQSSAFYVDAGITYNGVP- 608 (768) T ss_pred CceeEEeEEEEEcCCCEEEEEEEEecCCCCccEEEEEEEecCCCeEEEEEEecCcccccccccccceEeccccccCCcc- Confidence 8899999999986 677776665 23479999999999999999999999863 334556789999998775422 Q ss_pred ceeccceeeEEEcccccCCcccceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEe Q lcl|Aclame:pro 606 TYNDDTFTTSIHIPTIYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIK 685 (794) Q Consensus 606 t~~~~~~~t~~~~~~~~g~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~ 685 (794) ...++|+.|+|++++.+.+||...+...+.+| +|.+++++++|+|||+|+++++++||+++ T Consensus 609 ------------~~~~~gl~~leg~~v~v~~dG~~~~~~~v~~g-------~itl~~~~~~v~vG~~y~s~~~~~p~~~~ 669 (768) T protein:vir:10 609 ------------TSTIAGLGHLEGVTVAVLTDGAVHPSRTVTAG-------AITLDWSASIVHIGVPTTCRIQTMQLNAG 669 (768) T ss_pred ------------eeeecCCCCcccceEEEEECCEeccCceecCC-------EEEeCCCCceEEEeEeeeEEEEecceEee Confidence 12356999999999999999998887777655 46667899999999999999999999999 Q ss_pred ccCCccceeeeeeccEEEEEEEEEeeccceEEEEEccCCCcceeeecCceecccccccCccccccceEEEEecc-ccceE Q lcl|Aclame:pro 686 QTADDGSTSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVG-NAKFN 764 (794) Q Consensus 686 ~~~g~~~~~~~~~~r~~l~~~~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~-~~~~~ 764 (794) .++|..++ +|+||+++.+++.+|+++.+.++...++. ...+.+.... .....++++||+++||+.+ ++++. T Consensus 670 ~~~gs~~~-----~~~ri~r~~v~~~~S~~~~~~~~~~~~~~--~~~~~r~~~~-~~~~~~~l~TG~~~v~~~~~~~~~~ 741 (768) T protein:vir:10 670 AANGTAQG-----KTKRVTNIATRFSRSLGGVVGPTFDDNDL--EQLSFRKPSN-AMDRAVPLFDGDMESDWRGGYEGQS 741 (768) T ss_pred cCCccccc-----cceEEEEEEEEEecccceEEEecCCCCCc--eeeeeEecCc-ccCccCCcccCEEEEEecCCCCcce Confidence 88876543 58999999999999999998876554331 1112233222 2334578899999999865 57889 Q ss_pred EEEEEECCcCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 765 TVYILSDETTPLNIIGCGWEGNYLRRS 791 (794) Q Consensus 765 ~v~i~~~~p~P~tvlai~~eg~y~~r~ 791 (794) +|+|+|++|+||+||||+||+.+|+|+ T Consensus 742 ~i~i~~d~P~P~tvlsi~~~~~~nd~~ 768 (768) T protein:vir:10 742 WICYQNDQPLPVTLLGFFPILDTQDDR 768 (768) T ss_pred EEEEEECCCCCEEEEEEEEEEEEeecC Confidence 999999999999999999999999998 No 19 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=100.00 E-value=2.2e-161 Score=901.32 Aligned_cols=719 Identities=14% Similarity=0.129 Sum_probs=524.8 Q ss_pred Cceeeeechhhhcc-----cccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHE 75 (794) Q Consensus 1 Ma~v~~~~~s~~~G-----vS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~ 75 (794) |+ |++.++||.+| +++|+|++||++||++|+||+++|+||++||||++||++++++ .+++|||||.|+++| T Consensus 1 m~-i~~~q~sF~~GElsP~l~gR~Dl~ry~~q~~~~~N~~~~~~GGl~rRpGt~fva~~~~~---~g~~rLipf~~s~~q 76 (823) T protein:vir:95 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYP---NRKCRLIPFQFSTVQ 76 (823) T ss_pred Cc-ceeechhccCceechheeccchHHHHHHHHhhhhCcEeeecCCceecCchhhhhhhcCC---CCCeeEEEEEeCCCc Confidence 99 99999999999 8899999999999999999999999999999999999998765 357899999999999 Q ss_pred eEEEEEeCCceEEEEcCCeEEEEEcCcccce----eecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCcc Q lcl|Aclame:pro 76 QYYAVFTGSGIRVFDLSGNEKQVRYPNGSNY----IKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQD 151 (794) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~~v~~~~~~~y----~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~ 151 (794) +|+|||++++||||+.+|.+ ...++..| .+++.+..+|+|+|+||+|||+|++|||+++.+.++ +.|...+. T Consensus 77 ~y~Lefg~~~irV~~~~g~v---v~~~~~~~ev~tPy~~~~l~~Lr~~qsaD~~fivh~~~~p~~L~r~~~-~~w~l~~~ 152 (823) T protein:vir:95 77 TYALEFGHQYMRVIKDGALV---LNSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAH-DNWQLVDV 152 (823) T ss_pred EEEEEEcCCeEEEEeCCcEE---EecCCceeEEecccccccccceeEEEeccEEEEEcCCccceEEEecCC-CCceEEEE Confidence 99999999999999877743 22333322 123456779999999999999999999999877766 66877776 Q ss_pred ceEeecCCcCCceeEEEecCc-eEEEEEeecccCCcccccccchhhhhhhhhhhcccccceeEEECCceEEEEECCCCcc Q lcl|Aclame:pro 152 GLINVRGGQYGRELIVHINGK-DVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQI 230 (794) Q Consensus 152 ~~~~v~~g~y~~~y~vti~~~-~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~tv~~~~~~~~v~~~~~~~~ 230 (794) .|...+.++.+.+.++++... .+..++.++...... +.+.+..+.................... . T Consensus 153 ~~~~gp~~~~~~~~t~~v~~~~~~~~~t~ta~~~~~~---------~d~vg~~~~l~~~~~~~~~~~~~~~~~~-----~ 218 (823) T protein:vir:95 153 VTKNGPFEDINIDESLTVYASASTGTITLTASASIFG---------AEQVGKLFYLEQPAVDSVPVWETSKSTS-----I 218 (823) T ss_pred EEeccccccccccceeEEeccccCceeEEeecccccc---------hhhccceEEEeccccceeeecceeeeec-----c Confidence 665444444444444444322 122222222111111 1111111111000000000000000000 0 Q ss_pred ceeEeecccCcceeeeEEEEeeeeeeeccc-cCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeeccc-ceeeEecCcc Q lcl|Aclame:pro 231 DSFTTKDGYADQLINPVTHYAQSFSKLPPN-APNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWN-TEDQVLWETM 308 (794) Q Consensus 231 ~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~-~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~-~~~~~~~~t~ 308 (794) ... ..... +... .........++.. ....+.+...++.......+|..+....|.|++++..+ .......++| T Consensus 219 ~~~-~~~~~-~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~v~~~~~~~~~~~~~ 293 (823) T protein:vir:95 219 GDI-RRADS-NYYR---AVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTATAEVISYI 293 (823) T ss_pred cce-EEecc-ccee---eeeccccceeecccCCcceEEeceecccccceeEEEEEeCCcceEEEEeecceeeeceEeeee Confidence 000 00000 0000 0000001122222 22233333333322222223333445667888876443 3344556789 Q ss_pred eEEEEEecCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeeec----CCeEEEEccCCccccccccccc Q lcl|Aclame:pro 309 PHALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLS----GENIILSRTAKYFNFYPASIAN 384 (794) Q Consensus 309 p~~lv~~~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~----~~~v~~S~~gd~~nF~~~s~~~ 384 (794) |+.+++..++++.|....|. ..++||++|+||||||+|++ |++|||||+|||+||+++++ T Consensus 294 ~~~~~~~~~~t~~~~~~~~~--------------~~~g~Ps~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~-- 357 (823) T protein:vir:95 294 PSQVVGEDNASYKWAKYAWN--------------SVNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNP-- 357 (823) T ss_pred ccccccCCcCCccccccccC--------------cCCCCccEEEEEeceEEEEEcCCCCcEEEEeccCCccccccccC-- Confidence 99999888888887766664 35689999999999999994 79999999999999999984 Q ss_pred CCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCC--CcccccceEEEEeeeecccCCCCcEEeCCeEEEEe Q lcl|Aclame:pro 385 LSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS--GTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFAS 462 (794) Q Consensus 385 ~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~ 462 (794) ++|||||++++++++++.|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|.|++ ++|+|+.+|+.++|+| T Consensus 358 ~~DdD~I~~~~s~~~~~~i~~~v~~~-~Lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~vg~~~~Fv~ 435 (823) T protein:vir:95 358 TQDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGS-SNVPPIAVANIALFVQ 435 (823) T ss_pred CCCCCcEEEEEcCCcceEEEEEeecC-cEEEEecCcEEEEEcCCCcccceeeEEEEEeecccc-ccccceEeCCeEEEEe Confidence 47999999999999999999999995 7999999999999875 689999999999999965 5799999999999999 Q ss_pred cCCCeEEEEEEeeeeccccceehhHHHHHHHHhcCCC-cEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEE Q lcl|Aclame:pro 463 PRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNG-VFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWS 541 (794) Q Consensus 463 ~~g~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~ 541 (794) ++|+ +++||.+. +.++.|.+.|+|+|++||+++. +..++++++ +..++||+++||+|++|+|+ +||+|.||| T Consensus 436 ~~g~--~vre~~~~-~~~d~~~~~dlT~~a~hl~~~~~i~~~a~~~~-p~~~~~~v~~dG~l~~~ty~---~~q~v~aW~ 508 (823) T protein:vir:95 436 EKGS--VVRDLAYS-FDVDGYQGNDLTILANHLFQKHSIVDWCFSIV-PYSSAFCIRDDGKLLVMTYL---RDQQVFAWA 508 (823) T ss_pred cCCC--EEEEEEEe-eecCceecchhhhhhhhhcCCCceEEEEEecC-CCeEEEEEecCCcEEEEEEe---cccceeeeE Confidence 9885 57777654 5678999999999999999875 555555554 45556899999999999997 889999999 Q ss_pred eeecCCCeEEEEE--EEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcc------------- Q lcl|Aclame:pro 542 HWDFGENVQVLAC--QSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGT------------- 606 (794) Q Consensus 542 ~w~~~g~~~~~~~--~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t------------- 606 (794) ||+++|+++++|+ ++.+|+||++|+|+++++.++|+|++++......++++||||+.+|.+.... T Consensus 509 ~~~~~g~~~~~~~i~~~~~d~l~~~v~R~i~g~~~~yiE~~~~~~~~~~~~~~~lD~~~s~~g~~~~~~~~~l~~g~~~l 588 (823) T protein:vir:95 509 PQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTITGGSGEW 588 (823) T ss_pred EEecCCcEEEEEEecCCCCCEEEEEEEeccCCeEEEEEEeeccccCCCccceeEEEEEEEeecCcccceeeEecCCCCcc Confidence 9999999998887 3458999999999999999999999999888888889999999988643211 Q ss_pred -------ee-ccc-------eeeEEEc----------------------------------------------------- Q lcl|Aclame:pro 607 -------YN-DDT-------FTTSIHI----------------------------------------------------- 618 (794) Q Consensus 607 -------~~-~~~-------~~t~~~~----------------------------------------------------- 618 (794) .. ++. ...++.+ T Consensus 589 ~~l~g~~v~~adg~~~~~~~v~g~i~l~~~~~~~~vGl~~~~~i~~~~~~v~~~~a~~~~~~r~v~a~l~~~~t~~~~~~ 668 (823) T protein:vir:95 589 DYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVATTNWQMA 668 (823) T ss_pred cccCceEEEecCcceECCccceeEEEeCcCCCccccccceEEEEEEeeceeeCCceEEEccCCcccceeeeeeccccccc Confidence 00 000 0011111 Q ss_pred -ccccCCcccceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeee Q lcl|Aclame:pro 619 -PTIYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTED 697 (794) Q Consensus 619 -~~~~g~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~ 697 (794) ..+.||+|+||++|.+.+||..++..+|..| +|+++.+++.|||||+|+++++++|+++..+ |.++++ T Consensus 669 ~~~~~gL~hleg~tv~v~~dg~~~~~~~v~~G-------~vtl~~~~~~v~vGl~~~~~~~~l~~~~~~~-g~~~g~--- 737 (823) T protein:vir:95 669 RRTFGGLSHLEGQTVNILSDANVEPQKVVSGG-------AVTLESPGAVVHIGLPITAEFETLDININGQ-ETLLDK--- 737 (823) T ss_pred cceeeeccccccceEEEEEcCeeeCCeEecCC-------EEEecCCCCEEEEeecceeeEEecchhcCCC-cccCCc--- Confidence 1246999999999999999999999998776 4556688999999999999999999998764 655554 Q ss_pred eccEEEEEEEEEeeccceEEEEEccCCCcceeeecCceecccccccCccccccceEEEEe-ccccceEEEEEEECCcCCE Q lcl|Aclame:pro 698 IGRLQLRRAWVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPV-VGNAKFNTVYILSDETTPL 776 (794) Q Consensus 698 ~~r~~l~~~~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~-~~~~~~~~v~i~~~~p~P~ 776 (794) ++||+++.+.+++|.++.+.-... +.+.. +.+ +.+.+..+|++++|++++++ .+|+++.+|+|+|++|||| T Consensus 738 --~~ri~~~~~~~~~s~~~~~g~~~~-~l~~~---~~r--~~~~~~~~~~~~tG~~~~~~~~~~~~~~~~~i~q~~plp~ 809 (823) T protein:vir:95 738 --KQVIPSVTLVVNASRGIWATTPGG-KWYEY---PQR--EFEFYDDPVDDATGKVEVKLDSNWGKNGRVKIRQLDPLPL 809 (823) T ss_pred --eeEEeEEEEEEEeeeeEEEecCCC-ceeEe---ecc--CCCcccCCCCcccceEEEecCCCcCCccEEEEEEcCCCce Confidence 467899999999998887754222 11111 222 12345677899999999998 7899999999999999999 Q ss_pred EEEEEEEEEEEecc Q lcl|Aclame:pro 777 NIIGCGWEGNYLRR 790 (794) Q Consensus 777 tvlai~~eg~y~~r 790 (794) |||||..|-..+-= T Consensus 810 tvl~v~~~~~~~g~ 823 (823) T protein:vir:95 810 SVLAVIPRLTVGGF 823 (823) T ss_pred EEEEEEEEEEecCC Confidence 99999987664433 No 20 >protein:vir:98487 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1592 # MgeName: BMP-1 # Cross-refs: genbank:acc:NP_996575;genbank:gi:45569506;genbank:GeneID:2767815 Probab=100.00 E-value=1.6e-159 Score=891.12 Aligned_cols=666 Identities=14% Similarity=0.156 Sum_probs=498.2 Q ss_pred Cceeeeechhhhcc-----cccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHE 75 (794) Q Consensus 1 Ma~v~~~~~s~~~G-----vS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~ 75 (794) |++++..++||.+| +..|.|++||++||++|+||++.|+||++||||++||++++++ ..++|||||.|+++| T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~---~~~~rlipf~~~~~~ 77 (681) T protein:vir:98 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDS---AKKVRLIPFTYSVTQ 77 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCC---CCcEEEEEEEeCCCc Confidence 99999999999999 5669999999999999999999999999999999999998875 346899999999999 Q ss_pred eEEEEEeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEe Q lcl|Aclame:pro 76 QYYAVFTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLIN 155 (794) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 155 (794) +|+|||++++||||..+|.+.....+......+++.+..+|+|+|++|+|||+|+++||+++.|..+ ++|...+..|.. T Consensus 78 ~~~l~~g~~~~r~~~~~~~~~~~~~~~~~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~-~~W~l~~~~f~~ 156 (681) T protein:vir:98 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGA-TNWQLATIAFTS 156 (681) T ss_pred eEEEEEeCCeEEEEeCCcEEeeCcEeEEecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEEccC-CceEEEEEEecc Confidence 9999999999999987776543333322122234566788999999999999999999999877554 678777655543 Q ss_pred ecCCcCCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcccccceeEEECCceEEEEECCCCccceeEe Q lcl|Aclame:pro 156 VRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQIDSFTT 235 (794) Q Consensus 156 v~~g~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~tv~~~~~~~~v~~~~~~~~~~~~~ 235 (794) .+..+. +++. ....+.. ..+. ...+.+.+..... +. T Consensus 157 ~p~~p~----~~~a-----------t~~~~~~----------------------~~t~-----~~~v~avda~t~~--~s 192 (681) T protein:vir:98 157 PVATPT----SVTA-----------TSNNKGT----------------------DYTY-----RYVVTALDAEGKT--ES 192 (681) T ss_pred ccccce----eeee-----------eccCCcc----------------------ceeE-----eEEEEEeecccce--ee Confidence 332211 0110 0000000 0000 0001111100000 00 Q ss_pred ecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEEEEEe Q lcl|Aclame:pro 236 KDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVRA 315 (794) Q Consensus 236 ~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~~ 315 (794) ......+ .+.... ..+....+.+++..+...|.+ +....+.|.. ++....+.+...+.. T Consensus 193 ~~~~~~t------vt~~~~-------~~~~~~t~~w~a~~g~~~~~V-~~~~~gi~g~-ig~~~~~~~~~~~~~------ 251 (681) T protein:vir:98 193 APSSAGT------CTNNLF-------TNGGANTIAWSASSGASRYNV-YKEQGGLYGY-IGQTTGTSLVDDNIA------ 251 (681) T ss_pred cCCcceE------Eeeeee-------cCCcceeEEEEecCCceeeee-cccceeEEEE-eeccceeeeeecccc------ Confidence 0000000 000000 012223344444444433322 2222334422 222222222111111 Q ss_pred cCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeee----cCCeEEEEccCCcccccccccccCCCCCcE Q lcl|Aclame:pro 316 ADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFL----SGENIILSRTAKYFNFYPASIANLSDDDPI 391 (794) Q Consensus 316 ~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~----~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i 391 (794) ++...+ +.|. . ..++-.++||++|+||||||+|+ +||+|||||+|||+||+++++ +.||||| T Consensus 252 ~~~~~t---~~~~--------~-~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~--~~ddD~i 317 (681) T protein:vir:98 252 PDLSVT---PPIY--------D-AVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLP--VRDDDRV 317 (681) T ss_pred cCcccc---cccc--------c-cccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCC--CCCCccE Confidence 111111 1232 1 23455689999999999999999 589999999999999999884 5799999 Q ss_pred EEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCC--CcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEE Q lcl|Aclame:pro 392 DVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS--GTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTS 469 (794) Q Consensus 392 ~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~ 469 (794) ++++++++++.|+|+++++ +|+|||+++||.|+++ ++|||+|++++++|.|++ ++|+|+.+|++++|+|++|++ T Consensus 318 ~~~~~~~~~~~i~~~v~~~-~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~vg~~v~fv~~~g~~-- 393 (681) T protein:vir:98 318 AFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTTIYGAARGGH-- 393 (681) T ss_pred EEEEcCCcceeEEEEEecC-cEEEEEcCcEEEEecCCCccccceeEEEEEeeeecc-ccccceeeCCeEEEEecCCCE-- Confidence 9999999999999999985 6999999999999874 699999999999999976 579999999999999999975 Q ss_pred EEEEeeeeccccceehhHHHHHHHHhcCC-CcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCC Q lcl|Aclame:pro 470 IHRYYAVQDVSSVKNAEDITSHVPNYIPN-GVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGEN 548 (794) Q Consensus 470 ~~~~~~~~~~~~~~~~~dls~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~ 548 (794) ++||.+ ++.++.|.+.|+|++++|++++ ++..++.+++| ..++||+++||+|++|+|+ +||+|.|||||+|+|. T Consensus 394 vre~~y-~~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p-~~~~~~v~~dg~l~~~ty~---~eq~v~aW~~~~~~g~ 468 (681) T protein:vir:98 394 VRELAY-NWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAP-QPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDGV 468 (681) T ss_pred EEEEEE-eeecCceeccchhhhhhhhcCCCCeEEEEEecCC-CEEEEEEecCCcEEEEEEe---cccceeeEEEEecCCc Confidence 556655 4567889999999999999988 56666666555 5556899999999999997 8899999999999999 Q ss_pred eEEEEE--EEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcc Q lcl|Aclame:pro 549 VQVLAC--QSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANF 626 (794) Q Consensus 549 ~~~~~~--~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~ 626 (794) ++++|+ +..+|+||++|+|++++..++++|++++......+.++||||++++.+.. ...++|++| T Consensus 469 v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~-------------~~~~sgl~~ 535 (681) T protein:vir:98 469 FESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEP-------------VSHISGLEH 535 (681) T ss_pred EEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcc-------------eeeeccccC Confidence 998886 34579999999999999999999999987777777889999998876432 124578999 Q ss_pred cceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEE Q lcl|Aclame:pro 627 GRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRA 706 (794) Q Consensus 627 ~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~ 706 (794) ++|++|.+.+||..+...++.+| +|.++.++++|+|||+|+++++++||+++.++|.++++ +++|+++ T Consensus 536 leG~tv~i~aDG~~~~~~~V~~G-------~itl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~-----~~ri~rv 603 (681) T protein:vir:98 536 LEGKTVSILADGAVHPQRVVTDG-------AIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGR-----VKNINKL 603 (681) T ss_pred CCCcEEEEEeCCeecCcEeecCc-------EEEeCcCCceEEEeeeceeEEEecceeeecCCcccCCc-----eEEEEEE Confidence 99999999999999888887765 46677889999999999999999999999998876654 5788999 Q ss_pred EEEeeccceEEEEEccCCCcceeeecCceecccccccCccccccceEEEEec-cccceEEEEEEECCcCCEEEEEEEEEE Q lcl|Aclame:pro 707 WVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVV-GNAKFNTVYILSDETTPLNIIGCGWEG 785 (794) Q Consensus 707 ~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-~~~~~~~v~i~~~~p~P~tvlai~~eg 785 (794) .+++.+|+++.+.++.....+...+.+ .....+++++||++++|+. +|+++.+|+|+|++|+||+|+||+||- T Consensus 604 ~lr~~~S~g~~~~~~~~~l~~~~~~~~------~~~g~~~~l~TG~~~v~v~~~~~~~~~v~I~qd~PlP~tvlsi~~ev 677 (681) T protein:vir:98 604 WLRVHRSSGIFAGPHADALTEVKQRTS------EPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEI 677 (681) T ss_pred EEEEEcccceEEeeCCCceEEEEEecc------ccccccCCccCCeEEEEeCCCcCcceEEEEEECCCcCEEEEEeeEEE Confidence 999999999998876554433333322 2334567889999999985 779999999999999999999999998 Q ss_pred EEec Q lcl|Aclame:pro 786 NYLR 789 (794) Q Consensus 786 ~y~~ 789 (794) ...- T Consensus 678 ~vgg 681 (681) T protein:vir:98 678 AIGA 681 (681) T ss_pred EeeC Confidence 8887 No 21 >protein:vir:107802 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1673 # MgeName: BIP-1 # Cross-refs: genbank:acc:NP_996623;genbank:gi:45580757;genbank:GeneID:2767878 Probab=100.00 E-value=1.6e-159 Score=891.12 Aligned_cols=666 Identities=14% Similarity=0.156 Sum_probs=498.2 Q ss_pred Cceeeeechhhhcc-----cccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHE 75 (794) Q Consensus 1 Ma~v~~~~~s~~~G-----vS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~ 75 (794) |++++..++||.+| +..|.|++||++||++|+||++.|+||++||||++||++++++ ..++|||||.|+++| T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~---~~~~rlipf~~~~~~ 77 (681) T protein:vir:10 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDS---AKKVRLIPFTYSVTQ 77 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCC---CCcEEEEEEEeCCCc Confidence 99999999999999 5669999999999999999999999999999999999998875 346899999999999 Q ss_pred eEEEEEeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEe Q lcl|Aclame:pro 76 QYYAVFTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLIN 155 (794) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 155 (794) +|+|||++++||||..+|.+.....+......+++.+..+|+|+|++|+|||+|+++||+++.|..+ ++|...+..|.. T Consensus 78 ~~~l~~g~~~~r~~~~~~~~~~~~~~~~~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~-~~W~l~~~~f~~ 156 (681) T protein:vir:10 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGA-TNWQLATIAFTS 156 (681) T ss_pred eEEEEEeCCeEEEEeCCcEEeeCcEeEEecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEEccC-CceEEEEEEecc Confidence 9999999999999987776543333322122234566788999999999999999999999877554 678777655543 Q ss_pred ecCCcCCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcccccceeEEECCceEEEEECCCCccceeEe Q lcl|Aclame:pro 156 VRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQIDSFTT 235 (794) Q Consensus 156 v~~g~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~tv~~~~~~~~v~~~~~~~~~~~~~ 235 (794) .+..+. +++. ....+.. ..+. ...+.+.+..... +. T Consensus 157 ~p~~p~----~~~a-----------t~~~~~~----------------------~~t~-----~~~v~avda~t~~--~s 192 (681) T protein:vir:10 157 PVATPT----SVTA-----------TSNNKGT----------------------DYTY-----RYVVTALDAEGKT--ES 192 (681) T ss_pred ccccce----eeee-----------eccCCcc----------------------ceeE-----eEEEEEeecccce--ee Confidence 332211 0110 0000000 0000 0001111100000 00 Q ss_pred ecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEEEEEe Q lcl|Aclame:pro 236 KDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVRA 315 (794) Q Consensus 236 ~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~~ 315 (794) ......+ .+.... ..+....+.+++..+...|.+ +....+.|.. ++....+.+...+.. T Consensus 193 ~~~~~~t------vt~~~~-------~~~~~~t~~w~a~~g~~~~~V-~~~~~gi~g~-ig~~~~~~~~~~~~~------ 251 (681) T protein:vir:10 193 APSSAGT------CTNNLF-------TNGGANTIAWSASSGASRYNV-YKEQGGLYGY-IGQTTGTSLVDDNIA------ 251 (681) T ss_pred cCCcceE------Eeeeee-------cCCcceeEEEEecCCceeeee-cccceeEEEE-eeccceeeeeecccc------ Confidence 0000000 000000 012223344444444433322 2222334422 222222222111111 Q ss_pred cCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeee----cCCeEEEEccCCcccccccccccCCCCCcE Q lcl|Aclame:pro 316 ADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFL----SGENIILSRTAKYFNFYPASIANLSDDDPI 391 (794) Q Consensus 316 ~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~----~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i 391 (794) ++...+ +.|. . ..++-.++||++|+||||||+|+ +||+|||||+|||+||+++++ +.||||| T Consensus 252 ~~~~~t---~~~~--------~-~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~--~~ddD~i 317 (681) T protein:vir:10 252 PDLSVT---PPIY--------D-AVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLP--VRDDDRV 317 (681) T ss_pred cCcccc---cccc--------c-cccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCC--CCCCccE Confidence 111111 1232 1 23455689999999999999999 589999999999999999884 5799999 Q ss_pred EEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCC--CcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEE Q lcl|Aclame:pro 392 DVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS--GTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTS 469 (794) Q Consensus 392 ~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~ 469 (794) ++++++++++.|+|+++++ +|+|||+++||.|+++ ++|||+|++++++|.|++ ++|+|+.+|++++|+|++|++ T Consensus 318 ~~~~~~~~~~~i~~~v~~~-~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~vg~~v~fv~~~g~~-- 393 (681) T protein:vir:10 318 AFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTTIYGAARGGH-- 393 (681) T ss_pred EEEEcCCcceeEEEEEecC-cEEEEEcCcEEEEecCCCccccceeEEEEEeeeecc-ccccceeeCCeEEEEecCCCE-- Confidence 9999999999999999985 6999999999999874 699999999999999976 579999999999999999975 Q ss_pred EEEEeeeeccccceehhHHHHHHHHhcCC-CcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCC Q lcl|Aclame:pro 470 IHRYYAVQDVSSVKNAEDITSHVPNYIPN-GVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGEN 548 (794) Q Consensus 470 ~~~~~~~~~~~~~~~~~dls~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~ 548 (794) ++||.+ ++.++.|.+.|+|++++|++++ ++..++.+++| ..++||+++||+|++|+|+ +||+|.|||||+|+|. T Consensus 394 vre~~y-~~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p-~~~~~~v~~dg~l~~~ty~---~eq~v~aW~~~~~~g~ 468 (681) T protein:vir:10 394 VRELAY-NWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAP-QPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDGV 468 (681) T ss_pred EEEEEE-eeecCceeccchhhhhhhhcCCCCeEEEEEecCC-CEEEEEEecCCcEEEEEEe---cccceeeEEEEecCCc Confidence 556655 4567889999999999999988 56666666555 5556899999999999997 8899999999999999 Q ss_pred eEEEEE--EEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcc Q lcl|Aclame:pro 549 VQVLAC--QSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANF 626 (794) Q Consensus 549 ~~~~~~--~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~ 626 (794) ++++|+ +..+|+||++|+|++++..++++|++++......+.++||||++++.+.. ...++|++| T Consensus 469 v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~-------------~~~~sgl~~ 535 (681) T protein:vir:10 469 FESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEP-------------VSHISGLEH 535 (681) T ss_pred EEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcc-------------eeeeccccC Confidence 998886 34579999999999999999999999987777777889999998876432 124578999 Q ss_pred cceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEE Q lcl|Aclame:pro 627 GRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRA 706 (794) Q Consensus 627 ~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~ 706 (794) ++|++|.+.+||..+...++.+| +|.++.++++|+|||+|+++++++||+++.++|.++++ +++|+++ T Consensus 536 leG~tv~i~aDG~~~~~~~V~~G-------~itl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~-----~~ri~rv 603 (681) T protein:vir:10 536 LEGKTVSILADGAVHPQRVVTDG-------AIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGR-----VKNINKL 603 (681) T ss_pred CCCcEEEEEeCCeecCcEeecCc-------EEEeCcCCceEEEeeeceeEEEecceeeecCCcccCCc-----eEEEEEE Confidence 99999999999999888887765 46677889999999999999999999999998876654 5788999 Q ss_pred EEEeeccceEEEEEccCCCcceeeecCceecccccccCccccccceEEEEec-cccceEEEEEEECCcCCEEEEEEEEEE Q lcl|Aclame:pro 707 WVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVV-GNAKFNTVYILSDETTPLNIIGCGWEG 785 (794) Q Consensus 707 ~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-~~~~~~~v~i~~~~p~P~tvlai~~eg 785 (794) .+++.+|+++.+.++.....+...+.+ .....+++++||++++|+. +|+++.+|+|+|++|+||+|+||+||- T Consensus 604 ~lr~~~S~g~~~~~~~~~l~~~~~~~~------~~~g~~~~l~TG~~~v~v~~~~~~~~~v~I~qd~PlP~tvlsi~~ev 677 (681) T protein:vir:10 604 WLRVHRSSGIFAGPHADALTEVKQRTS------EPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEI 677 (681) T ss_pred EEEEEcccceEEeeCCCceEEEEEecc------ccccccCCccCCeEEEEeCCCcCcceEEEEEECCCcCEEEEEeeEEE Confidence 999999999998876554433333322 2334567889999999985 779999999999999999999999998 Q ss_pred EEec Q lcl|Aclame:pro 786 NYLR 789 (794) Q Consensus 786 ~y~~ 789 (794) ...- T Consensus 678 ~vgg 681 (681) T protein:vir:10 678 AIGA 681 (681) T ss_pred EeeC Confidence 8887 No 22 >protein:vir:107423 Length: 681 # NCBI annotation: Bbp13 # Family: family:all:780 # MgeID: mge:1537 # MgeName: BPP-1 # Cross-refs: genbank:acc:NP_958682;genbank:gi:41179374;genbank:GeneID:2717217 Probab=100.00 E-value=1.6e-159 Score=891.12 Aligned_cols=666 Identities=14% Similarity=0.156 Sum_probs=498.2 Q ss_pred Cceeeeechhhhcc-----cccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHE 75 (794) Q Consensus 1 Ma~v~~~~~s~~~G-----vS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~ 75 (794) |++++..++||.+| +..|.|++||++||++|+||++.|+||++||||++||++++++ ..++|||||.|+++| T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~---~~~~rlipf~~~~~~ 77 (681) T protein:vir:10 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDS---AKKVRLIPFTYSVTQ 77 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCC---CCcEEEEEEEeCCCc Confidence 99999999999999 5669999999999999999999999999999999999998875 346899999999999 Q ss_pred eEEEEEeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEe Q lcl|Aclame:pro 76 QYYAVFTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLIN 155 (794) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 155 (794) +|+|||++++||||..+|.+.....+......+++.+..+|+|+|++|+|||+|+++||+++.|..+ ++|...+..|.. T Consensus 78 ~~~l~~g~~~~r~~~~~~~~~~~~~~~~~~tpy~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~-~~W~l~~~~f~~ 156 (681) T protein:vir:10 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGA-TNWQLATIAFTS 156 (681) T ss_pred eEEEEEeCCeEEEEeCCcEEeeCcEeEEecCCCChhhhcCceEEEEcCEEEEECCCCcceEEEEccC-CceEEEEEEecc Confidence 9999999999999987776543333322122234566788999999999999999999999877554 678777655543 Q ss_pred ecCCcCCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcccccceeEEECCceEEEEECCCCccceeEe Q lcl|Aclame:pro 156 VRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQIDSFTT 235 (794) Q Consensus 156 v~~g~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~tv~~~~~~~~v~~~~~~~~~~~~~ 235 (794) .+..+. +++. ....+.. ..+. ...+.+.+..... +. T Consensus 157 ~p~~p~----~~~a-----------t~~~~~~----------------------~~t~-----~~~v~avda~t~~--~s 192 (681) T protein:vir:10 157 PVATPT----SVTA-----------TSNNKGT----------------------DYTY-----RYVVTALDAEGKT--ES 192 (681) T ss_pred ccccce----eeee-----------eccCCcc----------------------ceeE-----eEEEEEeecccce--ee Confidence 332211 0110 0000000 0000 0001111100000 00 Q ss_pred ecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEEEEEe Q lcl|Aclame:pro 236 KDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVRA 315 (794) Q Consensus 236 ~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~~ 315 (794) ......+ .+.... ..+....+.+++..+...|.+ +....+.|.. ++....+.+...+.. T Consensus 193 ~~~~~~t------vt~~~~-------~~~~~~t~~w~a~~g~~~~~V-~~~~~gi~g~-ig~~~~~~~~~~~~~------ 251 (681) T protein:vir:10 193 APSSAGT------CTNNLF-------TNGGANTIAWSASSGASRYNV-YKEQGGLYGY-IGQTTGTSLVDDNIA------ 251 (681) T ss_pred cCCcceE------Eeeeee-------cCCcceeEEEEecCCceeeee-cccceeEEEE-eeccceeeeeecccc------ Confidence 0000000 000000 012223344444444433322 2222334422 222222222111111 Q ss_pred cCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeee----cCCeEEEEccCCcccccccccccCCCCCcE Q lcl|Aclame:pro 316 ADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFL----SGENIILSRTAKYFNFYPASIANLSDDDPI 391 (794) Q Consensus 316 ~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~----~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i 391 (794) ++...+ +.|. . ..++-.++||++|+||||||+|+ +||+|||||+|||+||+++++ +.||||| T Consensus 252 ~~~~~t---~~~~--------~-~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~--~~ddD~i 317 (681) T protein:vir:10 252 PDLSVT---PPIY--------D-AVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLP--VRDDDRV 317 (681) T ss_pred cCcccc---cccc--------c-cccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCC--CCCCccE Confidence 111111 1232 1 23455689999999999999999 589999999999999999884 5799999 Q ss_pred EEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCC--CcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEE Q lcl|Aclame:pro 392 DVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS--GTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTS 469 (794) Q Consensus 392 ~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~ 469 (794) ++++++++++.|+|+++++ +|+|||+++||.|+++ ++|||+|++++++|.|++ ++|+|+.+|++++|+|++|++ T Consensus 318 ~~~~~~~~~~~i~~~v~~~-~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~vg~~v~fv~~~g~~-- 393 (681) T protein:vir:10 318 AFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTTIYGAARGGH-- 393 (681) T ss_pred EEEEcCCcceeEEEEEecC-cEEEEEcCcEEEEecCCCccccceeEEEEEeeeecc-ccccceeeCCeEEEEecCCCE-- Confidence 9999999999999999985 6999999999999874 699999999999999976 579999999999999999975 Q ss_pred EEEEeeeeccccceehhHHHHHHHHhcCC-CcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCC Q lcl|Aclame:pro 470 IHRYYAVQDVSSVKNAEDITSHVPNYIPN-GVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGEN 548 (794) Q Consensus 470 ~~~~~~~~~~~~~~~~~dls~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~ 548 (794) ++||.+ ++.++.|.+.|+|++++|++++ ++..++.+++| ..++||+++||+|++|+|+ +||+|.|||||+|+|. T Consensus 394 vre~~y-~~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p-~~~~~~v~~dg~l~~~ty~---~eq~v~aW~~~~~~g~ 468 (681) T protein:vir:10 394 VRELAY-NWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAP-QPIVWFISSSGKLLGLTYV---PEQQIGAWHQHDTDGV 468 (681) T ss_pred EEEEEE-eeecCceeccchhhhhhhhcCCCCeEEEEEecCC-CEEEEEEecCCcEEEEEEe---cccceeeEEEEecCCc Confidence 556655 4567889999999999999988 56666666555 5556899999999999997 8899999999999999 Q ss_pred eEEEEE--EEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcc Q lcl|Aclame:pro 549 VQVLAC--QSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANF 626 (794) Q Consensus 549 ~~~~~~--~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~ 626 (794) ++++|+ +..+|+||++|+|++++..++++|++++......+.++||||++++.+.. ...++|++| T Consensus 469 v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~-------------~~~~sgl~~ 535 (681) T protein:vir:10 469 FESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEP-------------VSHISGLEH 535 (681) T ss_pred EEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcc-------------eeeeccccC Confidence 998886 34579999999999999999999999987777777889999998876432 124578999 Q ss_pred cceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEE Q lcl|Aclame:pro 627 GRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRA 706 (794) Q Consensus 627 ~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~ 706 (794) ++|++|.+.+||..+...++.+| +|.++.++++|+|||+|+++++++||+++.++|.++++ +++|+++ T Consensus 536 leG~tv~i~aDG~~~~~~~V~~G-------~itl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~~g~-----~~ri~rv 603 (681) T protein:vir:10 536 LEGKTVSILADGAVHPQRVVTDG-------AIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGR-----VKNINKL 603 (681) T ss_pred CCCcEEEEEeCCeecCcEeecCc-------EEEeCcCCceEEEeeeceeEEEecceeeecCCcccCCc-----eEEEEEE Confidence 99999999999999888887765 46677889999999999999999999999998876654 5788999 Q ss_pred EEEeeccceEEEEEccCCCcceeeecCceecccccccCccccccceEEEEec-cccceEEEEEEECCcCCEEEEEEEEEE Q lcl|Aclame:pro 707 WVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVV-GNAKFNTVYILSDETTPLNIIGCGWEG 785 (794) Q Consensus 707 ~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-~~~~~~~v~i~~~~p~P~tvlai~~eg 785 (794) .+++.+|+++.+.++.....+...+.+ .....+++++||++++|+. +|+++.+|+|+|++|+||+|+||+||- T Consensus 604 ~lr~~~S~g~~~~~~~~~l~~~~~~~~------~~~g~~~~l~TG~~~v~v~~~~~~~~~v~I~qd~PlP~tvlsi~~ev 677 (681) T protein:vir:10 604 WLRVHRSSGIFAGPHADALTEVKQRTS------EPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEI 677 (681) T ss_pred EEEEEcccceEEeeCCCceEEEEEecc------ccccccCCccCCeEEEEeCCCcCcceEEEEEECCCcCEEEEEeeEEE Confidence 999999999998876554433333322 2334567889999999985 779999999999999999999999998 Q ss_pred EEec Q lcl|Aclame:pro 786 NYLR 789 (794) Q Consensus 786 ~y~~ 789 (794) ...- T Consensus 678 ~vgg 681 (681) T protein:vir:10 678 AIGA 681 (681) T ss_pred EeeC Confidence 8887 No 23 >protein:vir:1778 Length: 680 # NCBI annotation: tail protein A # Family: family:all:825 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570344;genbank:gi:18640503;genbank:GeneID:932716 Probab=100.00 E-value=1.3e-160 Score=897.21 Aligned_cols=540 Identities=27% Similarity=0.494 Sum_probs=478.9 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~~y~l~ 80 (794) ||+|+|+||||++|||||||.+|+|+||++|+||+|||+.||+||||++||+.|.+ .+.+.+||.++|+++++|++. T Consensus 1 M~~v~~si~nl~~GvSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRpg~~~i~~l~~---~~~~~~~~~~~rd~~e~~~~~ 77 (680) T protein:vir:17 1 MAAVEQMVPNLLGGISQQPDPLKLPGQVKQARNVQLDPTFGALKRPGTELIMQVTG---IPKRAKWIPIMRDAREHYYVA 77 (680) T ss_pred CccceecchhhhCcceecchhhcCcchhhhhhccccCcCcccccCccceeeeeccC---CCCCceeEEEecCCCCeEEEE Confidence 99999999999999999999999999999999999999999999999999998854 345779999999999999999 Q ss_pred EeCCc--------eEEEEc-CCeEEEEEcCcccceee---cCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCC Q lcl|Aclame:pro 81 FTGSG--------IRVFDL-SGNEKQVRYPNGSNYIK---TANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNP 148 (794) Q Consensus 81 ~~~~~--------~rv~~~-~g~~~~v~~~~~~~y~~---a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~ 148 (794) ++..+ ||||++ +|++++|.+.++..+.. ++.+..+||+++++|+|||+|+++.|++... ..++ T Consensus 78 ~~~~g~~~~~~~~i~v~d~~~G~~~~v~~~~~~~~~~~~~~~~~~~~lr~~tv~d~tfi~N~~v~~~~~~~-----~~~~ 152 (680) T protein:vir:17 78 IYREGANESGDLRIRVFDLKAGVERAVSFVGGEVEEYFPGDETDWEAIRSLTIGDYTFLSNPNVQPTTWSR-----SFSR 152 (680) T ss_pred EEcCCCcccccceeEEEEccCCeEEEEEcCCCceEEEeecCCCCccceEEEEEcCEEEEECCeEEEeccCC-----CCCC Confidence 98766 999998 69999999888754433 4556779999999999999999999987532 2345 Q ss_pred CccceEeecCCcCCceeEEEecCceEEEE----------------------------------------E---------- Q lcl|Aclame:pro 149 NQDGLINVRGGQYGRELIVHINGKDVAKY----------------------------------------K---------- 178 (794) Q Consensus 149 ~~~~~~~v~~g~y~~~y~vti~~~~~~t~----------------------------------------t---------- 178 (794) .+.+++.|++++|+++|.+++++....+. . T Consensus 153 ~~~g~~~v~~~ayg~ty~v~ing~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ag~~t~~~~~~a~la~~l~~~~~~~~~ 232 (680) T protein:vir:17 153 RPEGLVTIGAAGYGTSYIVDFATEDSGQQRRWAVQEMQAPKTKRKKGDGSPDEAGETTVNNWNGTGLSFRVKVEARAFLV 232 (680) T ss_pred CCeeEEEEEEeeeeeEEEEEEeccccceeeeeeeeeeeccccccccccccCCCCcceeeeeeeeeeeeeeeeeccceeee Confidence 66799999999999999999876321100 0 Q ss_pred --------------ee----ccc--CCc--------------------------------------ccccccchhhhhhh Q lcl|Aclame:pro 179 --------------IP----DGS--QPE--------------------------------------HVNNTDAQWLAEEL 200 (794) Q Consensus 179 --------------t~----~~s--~~~--------------------------------------~~~~s~~~~ia~~l 200 (794) .. .+. ... .....++++|+.+| T Consensus 233 ~~g~~~~~~y~~~~~l~~tg~~~~~~~~t~~v~~~G~~y~IsI~~~~~~~~~~~~~s~~~~t~~~~~a~~at~~~Ia~~L 312 (680) T protein:vir:17 233 DDGEEYGHNYIPYVTLLTPGNNTSPFPDTIRVDVSGEGWDIKVTKQIQSKVYANLGTAQFTTPVDQSGGGASTSDIVTGL 312 (680) T ss_pred cCCCceEEEEeeEEEEecCCccccccCceEEEecccceeEEEEccceeeEeccCccceeeeeccCCcccceeHHHHHHHH Confidence 00 000 000 00012345577777 Q ss_pred hhhhcccccceeEEECCceEEEEECC--CCccceeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcc Q lcl|Aclame:pro 201 AKQMRTNLSDWTVNVGQGFIHVTAPS--GQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSAD 278 (794) Q Consensus 201 ~~~~~~~~~~~tv~~~~~~~~v~~~~--~~~~~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~ 278 (794) ...+. ...++++...++++++...+ +.....+++++|++++.+..+.++++.+++||++|++|+.|+|.++.+++.+ T Consensus 313 ~~~i~-~~~~~~~~~~g~~i~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~Lp~~a~~g~~v~v~~~~~~~~~ 391 (680) T protein:vir:17 313 SAAIN-GLGTFTAESIGNVIRVRYSDPTRTDEFTMSARGGTSGTGLESIKYSVDTLAELPTKCWNDYQVAVRNTQDTEVD 391 (680) T ss_pred HHhhc-ccCcEEEEECCCEEEEEeccCCCceEEEeeccCCCCceeeeeeeeeeccccccccccCCCcEEEEEeCCCCccc Confidence 66653 35688999999999997654 4556677889999999999999999999999999999999999999999999 Q ss_pred eEEEEEecc--------CceEEEeecccceeeEecCcceEEEEEecCCceEEeecc-------ccccccCCcccccCchh Q lcl|Aclame:pro 279 QYYVRYDAE--------RKVWTETLGWNTEDQVLWETMPHALVRAADGNFDFKWLE-------WSPKSCGDVDTNPWPSF 343 (794) Q Consensus 279 ~yyv~~~~~--------~~~w~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~-------w~~r~~gd~~s~p~psf 343 (794) +|||+|+.. .++|+||++|+...+++.+||||+|++.++|.|.++..+ |++|.+|||++||+||| T Consensus 392 ~Yyv~~~~~~~~~~~~~~~~W~E~~~~~~~~~~~~~tmp~~l~r~~~g~f~~~~~~~~~~~~~~~~r~~Gdd~tnp~psF 471 (680) T protein:vir:17 392 DYYVKFETDVEDADVPGSGYWVETVKNGDDGGLVDDTMPHVLVRNALGDFTFSSLNNSSYGKTWADRSVGSEDTNPHPTF 471 (680) T ss_pred ceEEEEeccCcccCcccccceeecccCcccceeccCcceEEEEEccCceeEEEeeccccccccccccccCCcccCCCccc Confidence 999999974 358999999999999999999999999999999999886 99999999999999999 Q ss_pred c--CCCceEEEEEccceeeecCCeEEEEccCCcccccccccccCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcE Q lcl|Aclame:pro 344 V--GSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQ 421 (794) Q Consensus 344 ~--g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~s~~~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q 421 (794) + |+||++|+||||||+|++|++|||||+||||||++++++++.|||||++++++++++.|+|+++++++|+|||+++| T Consensus 472 ~~~G~~p~~v~f~q~RL~f~s~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~t~g~q 551 (680) T protein:vir:17 472 TESGNGIYGMFMYKNRLGFLTQDAVIMSQVGDYFNFYATSGVTISDADPIDMATSDTKPVKLEAAISSTSGAILFGNQAQ 551 (680) T ss_pred ccCCCCceEEEEEcceEEEeeCCeEEEEccCCcccccccccccCCCCccEEEEEcCCcceeeeEEeecCCcEEEEecCeE Confidence 8 88999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCC-CcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeccccceehhHHHHHHHHhcCCCc Q lcl|Aclame:pro 422 FVLTAS-GTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGV 500 (794) Q Consensus 422 ~~l~~~-~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~ 500 (794) |+|+++ ++|||+|++++++|+|+|++.|+|+.+|+.++|+|++|+|++++||. +++.+++|.+.|||+|++|||+|++ T Consensus 552 ~~ls~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~s~vre~~-y~~~~d~y~a~DlT~~a~hl~~g~v 630 (680) T protein:vir:17 552 FRLSSPDESFGPKTATLDKISNYTYESKADPVQTGVSMIFPTNMGTYSSVYELS-TESAKGTPVIEDSSRVIPRLIPSGL 630 (680) T ss_pred EEEecCCceecceeEEEEEEEeecccCCCCceEeCCeEEEeecCCCcceEEEEe-eeeccCceehhhHHHHHHHhcCCce Confidence 999985 59999999999999999999999999999999999999999999985 5677899999999999999999999 Q ss_pred EEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeEEeEEeeecCCCeE Q lcl|Aclame:pro 501 FSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQ 550 (794) Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~ 550 (794) .+++++++++.+++|+++++|+|++|+|||+++||+|+|||||+|++.-. T Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~l~~~~yl~~~~e~~v~aW~rw~~~~~d~ 680 (680) T protein:vir:17 631 TWSTASMNNDTVFFGNAKKGRNVYVFRFFNEGQERKVAGWTTWYYEDQDH 680 (680) T ss_pred EEEEeeCCCCeEEEEEEcCCCEEEEEEEeeCCCceEEEEEEEEecCCCCC Confidence 99999999999999999999999999999999999999999999987543 No 24 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=100.00 E-value=6.2e-158 Score=882.47 Aligned_cols=712 Identities=14% Similarity=0.137 Sum_probs=499.3 Q ss_pred Cceeeeechhhhcc-----cccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHE 75 (794) Q Consensus 1 Ma~v~~~~~s~~~G-----vS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~ 75 (794) |+ ++..++||++| +..|.|++||++||++|+||+++|+||++||||++||++++++ ++++|||||.|+++| T Consensus 1 m~-~~~~q~sF~~GElsP~l~gR~Dl~~y~~g~~~~~N~~~~p~Gg~~rRpGt~fva~~~~~---~~~~rLipF~fs~~q 76 (825) T protein:vir:73 1 MA-FSWIQPSFAGGEIGPSLYGRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYP---DRKCRLIPFQFSTVQ 76 (825) T ss_pred Cc-cceeccccccceechhhcccchHHHHHHHHHHhcCcEEEecCCceecCchHHhHhhcCC---CCCEEEEEEEeCCCc Confidence 76 45778999999 6669999999999999999999999999999999999998765 357899999999999 Q ss_pred eEEEEEeCCceEEEEcCCeEE-EEEcCc--ccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccc Q lcl|Aclame:pro 76 QYYAVFTGSGIRVFDLSGNEK-QVRYPN--GSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDG 152 (794) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~-~v~~~~--~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~ 152 (794) +|+|||++++||||..+|... +...+. ..+| ++.+..+|+++|++|+|||+|+++||+++.|..+ ++|...+.. T Consensus 77 ~y~Lefg~~~lrv~~~gg~v~~~~~~~~e~~TPy--~~~~l~~l~~~QsaD~~~i~h~~~pp~~L~r~~~-~~W~l~~~~ 153 (825) T protein:vir:73 77 TYALEFGHNYMRVIKDGAYVLTTSNVIYELAMPY--ADTDLFRIKFTQSADVLTLVHPAYPPKELRRYAH-DNWQIVDVT 153 (825) T ss_pred EEEEEEeCCeEEEEeCCceEeccCCceEEEeccc--chhhhhhheeeeecCEEEEEcCCCceeEEEEecC-CCcEEEEEe Confidence 999999999999998877431 111111 2233 4456778999999999999999999999877765 567766555 Q ss_pred eEeecCCcCCceeEEEecCceEEEEEeecccCCcccccccc-hhhhhhhhhhhccc------ccce---eEEECCceEEE Q lcl|Aclame:pro 153 LINVRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDA-QWLAEELAKQMRTN------LSDW---TVNVGQGFIHV 222 (794) Q Consensus 153 ~~~v~~g~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~-~~ia~~l~~~~~~~------~~~~---tv~~~~~~~~v 222 (794) |...+....+....+++. +++..+..+.+++. .+-+.+....+... ...| +....+. + T Consensus 154 f~~gp~~~in~~~sv~v~---------asg~tg~~TiTaS~a~~~~~~vG~~i~~~~~~v~si~~~~~~~~~~~~~---v 221 (825) T protein:vir:73 154 TKNGPFEDINVDETVKVY---------ASASTGTITLTASSAIFGAEQVGKLFYLEQPAVDSVPVWETSKTTAIND---V 221 (825) T ss_pred ccCCccccccccccceee---------ecccCceeEEEeeccccCchhcCeEEEEecccccccceeeeeeEEEeee---E Confidence 443333222211111111 11111111111110 01011100000000 0000 0000000 0 Q ss_pred EECCCCccceeEeecccCcceeeeEEEEeeeeeeeccccCCCeEE-EEEcCCCCCcceEEEEEeccCceEEEeeccccee Q lcl|Aclame:pro 223 TAPSGQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMV-KIVGDASKSADQYYVRYDAERKVWTETLGWNTED 301 (794) Q Consensus 223 ~~~~~~~~~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v-~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~ 301 (794) +..++... ..... ....+++..+..|... .+.+........-+.......+.++.+..++... T Consensus 222 ~~~~~~~~-~~~~~---------------~~~~t~~~~a~~g~~~~~~~g~~~~~~~~~~~~~~~~~g~~~it~~~~~~~ 285 (825) T protein:vir:73 222 RRADSNYY-RANTS---------------GKTGTLRPSHTEGMSWDGWGGTGSDDTGIQWEYLHSGFGIAKITAVAGDGL 285 (825) T ss_pred EECCCcee-eeecc---------------cccceeeccccCCceeEeeeeecccCCceEEEEEecCCceEEEeeccccce Confidence 00000000 00000 0001122222222221 1111111111111112223334444443333211 Q ss_pred eE---ecCcceEEEEEecCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeee----cCCeEEEEccCCc Q lcl|Aclame:pro 302 QV---LWETMPHALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFL----SGENIILSRTAKY 374 (794) Q Consensus 302 ~~---~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~----~~~~v~~S~~gd~ 374 (794) .. ....+|+.++..++++++++...|. -.++||++|+||||||+|+ +|++|||||+||| T Consensus 286 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~--------------~~~gyPs~v~f~q~RL~f~g~~~~p~~v~~Srtgd~ 351 (825) T protein:vir:73 286 TATADVVSFIPSQVVGSANASYKWAKYAWN--------------SVNGYPSTVVYYQQRLYFAASTAYPQTIWASRTGDY 351 (825) T ss_pred eeccccceecccccccCCCCCcccccCCcc--------------cCCCCccEEEEEcceEEEeecCCCCCEEEEEccCCc Confidence 11 1122455555555666666555553 3458999999999999999 5899999999999 Q ss_pred ccccccccccCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCC--CcccccceEEEEeeeecccCCCCcE Q lcl|Aclame:pro 375 FNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS--GTLTSKSVELNLTTQFDVQDRARPF 452 (794) Q Consensus 375 ~nF~~~s~~~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv 452 (794) +||++++ +++|||||++++++++++.|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|.|+++ +|+|+ T Consensus 352 ~nF~~~~--~~~DdD~I~~~~s~~~~~~i~~~~~~~-~L~~~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~~-~~~Pv 427 (825) T protein:vir:73 352 KDFGKNN--PIQDDDRIIYTYAGRQVNEIRHLIDVG-NLVALTSGGEYTISGDQNKVLTPSAFSFSSQGNNGSS-NVPPI 427 (825) T ss_pred cccccCC--CCCCCccEEEEEcCCcceeEEEEeecC-cEEEEecCceEEEecCCCcccceeeEEEEeeeeeccc-cccce Confidence 9999998 467999999999999999999999985 8999999999999875 6999999999999999775 79999 Q ss_pred EeCCeEEEEecCCCeEEEEEEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecC Q lcl|Aclame:pro 453 GIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLN 532 (794) Q Consensus 453 ~vg~~v~fv~~~g~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~ 532 (794) .+|++++|+|+.|+ +++||.+. +.++.|.+.|+|+|++||+++..+..+++++.+..++|++++||+|++|+|+ T Consensus 428 ~vg~~~~Fv~~~g~--~vre~~~~-~~~d~~~~~dlt~~a~hl~~~~~~~~~a~~~~p~~~~~~v~~dg~l~~~ty~--- 501 (825) T protein:vir:73 428 AVANIALFIQEKGS--VVRDLAYS-FDVDGYQGTDLTILANHLFQKHSIVDWSFCIVPYSSAFCIRDDGKLLVLTYL--- 501 (825) T ss_pred EeCCeEEEEeCCCC--eEEEEEEe-eecCceeccchhhhhHhhccCCceEEEEEcCCCceEEEEEecCCeEEEEEEe--- Confidence 99999999999886 56777554 5678899999999999999975444444444555556899999999999997 Q ss_pred CceeEEeEEeeecCCCeEEEEEE--EcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCc----- Q lcl|Aclame:pro 533 EELRQQSWSHWDFGENVQVLACQ--SISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSG----- 605 (794) Q Consensus 533 ~e~~v~aW~~w~~~g~~~~~~~~--~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~----- 605 (794) +||+|.|||||+++|+++++|+. ..+|+||++|+|+++++.++|.|++++.....+++++||||+++|++... T Consensus 502 ~~q~v~aW~~~~~~g~v~~~~~i~~~~~D~l~~iV~R~~~g~~~~yiE~~~~~~~~~~~~~~~vD~g~~~~g~~~~~~l~ 581 (825) T protein:vir:73 502 RDQQVFAWAPQSSAGKYESTCSISEGSEDAVYFVVNRTINGQTVRYIERLSSRLFTNDEDAFFVDCGLSYDGRNTSSRTM 581 (825) T ss_pred ccccceeeEEEecCCcEEEEEEecCCCccEEEEEEEEeeCCceEEEEEEecccccCCCcceeEEEEEeeecccceeecee Confidence 88999999999999999998874 34799999999999999999999999988888889999999998875321 Q ss_pred -----cee--cc---------ce-------eeEEEc-------------------------------------------- Q lcl|Aclame:pro 606 -----TYN--DD---------TF-------TTSIHI-------------------------------------------- 618 (794) Q Consensus 606 -----t~~--~~---------~~-------~t~~~~-------------------------------------------- 618 (794) +.+ .+ .. ..++.+ T Consensus 582 ~l~g~tv~~~~~g~~~~~v~~g~itl~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~v~~~~~~~a~~~~ 661 (825) T protein:vir:73 582 TISGGTGDWSYQVDYPVTVSGGAYFVNTDVGAQIQFPYTGTDPDTNEPVAKELRGDIISVTSNTAVVVRFNRNVPPVLRN 661 (825) T ss_pred eeCCceEEEEeCCeEEEEEcCCeEEecccceEEEEecccCcccccccceeceeeEEEccccCceEEEEEecccccceeee Confidence 000 00 00 001111 Q ss_pred ----------ccccCCcccceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccC Q lcl|Aclame:pro 619 ----------PTIYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTA 688 (794) Q Consensus 619 ----------~~~~g~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~ 688 (794) ..++||+||||++|.+++||..++..+|++| +|.++.+++.|||||+|+++++++||++..+ T Consensus 662 ~~~t~~~~a~~~~~gL~hLeG~~v~v~~Dg~~~~~~~V~~G-------~vtl~~~~~~v~vGl~y~~~~~~l~~~~~~~- 733 (825) T protein:vir:73 662 VATTNWQMARQTFSGLAHLEGQTVNILSDASVEPQKTVTGG-------AVTLESPGAVVHIGLPITAEFETLDININGQ- 733 (825) T ss_pred ecccCCCcchheeccccccCCceEEEEECCeeeCCeEecCc-------EEEecCCceEEEEeeCccceEEecccccCCC- Confidence 1237999999999999999999999998776 4555578999999999999999999998653 Q ss_pred CccceeeeeeccEEEEEEEEEeeccceEEEEEccCCCcceeeecCceecccccccCccccccceEEEEe-ccccceEEEE Q lcl|Aclame:pro 689 DDGSTSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPV-VGNAKFNTVY 767 (794) Q Consensus 689 g~~~~~~~~~~r~~l~~~~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~-~~~~~~~~v~ 767 (794) |..+++ ++||+++.+.+.+|.++.+..... +.....+ + +...+..+|++++|++++++ .+|+++.+|+ T Consensus 734 g~~~g~-----~~ri~~~~~~~~~s~~~~~g~~~~-~l~~~~~---r--~~~~~~~~~~~~tG~~~~~~~~~~~~~~~~~ 802 (825) T protein:vir:73 734 ETLLDK-----KQVIPTVTMVVNASRGIWATTPGG-TWYEYPQ---R--EFEFYDDPVDDATGKVEVKLDSNWDKNGRVK 802 (825) T ss_pred ccccCc-----cEEEEEEEEEEEeeeeEEEecCCC-cceEeec---c--CCCcccCCCccccCcEEEecCCCCCCccEEE Confidence 555544 568899999999998887753322 1111221 2 12345667889999999998 7899999999 Q ss_pred EEECCcCCEEEEEEEEEEEEecc Q lcl|Aclame:pro 768 ILSDETTPLNIIGCGWEGNYLRR 790 (794) Q Consensus 768 i~~~~p~P~tvlai~~eg~y~~r 790 (794) |+|++|||||||||..|-..+-= T Consensus 803 i~q~~PlP~tvlav~~~~~~~g~ 825 (825) T protein:vir:73 803 VRQLDPLPLSVLAVLPRLTVGGF 825 (825) T ss_pred EEEcCCCCEEEEEEEEEEEecCC Confidence 99999999999999988765444 No 25 >protein:vir:102644 Length: 594 # NCBI annotation: Hypothetical protein # Family: family:all:780 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024422;genbank:gi:48696643;genbank:GeneID:2948111 Probab=100.00 E-value=1.9e-135 Score=759.15 Aligned_cols=562 Identities=13% Similarity=0.065 Sum_probs=443.1 Q ss_pred Cceeeeechhhhcc-c----ccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-I----SQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHE 75 (794) Q Consensus 1 Ma~v~~~~~s~~~G-v----S~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~ 75 (794) |+++. ++||++| | ..|.|++||++||++|+||++.||||++||||++|+++++++ ..++||+||.|+++| T Consensus 1 m~~~~--~~~F~~GelsP~l~~r~Dl~~y~~~~~~~~n~~~~~~G~~~rR~G~~~~~~~~~~---~~~~~lipF~~s~~~ 75 (594) T protein:vir:10 1 MADFS--QTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDG---EVRLFRLPAVDAPSN 75 (594) T ss_pred Cceee--ccccCcceecceeccchhHHHHHHHHhhhhceEEEecCCeecCChhHhhhhccCC---CCCEEEEEEEeCCCC Confidence 99985 6999999 4 558999999999999999999999999999999999998765 457899999999999 Q ss_pred eEEEEEeCCceEEEEcCCeEEEEE--cCc--ccceeec-CCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCc Q lcl|Aclame:pro 76 QYYAVFTGSGIRVFDLSGNEKQVR--YPN--GSNYIKT-ANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQ 150 (794) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~~v~--~~~--~~~y~~a-~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~ 150 (794) +|+|||+++++|+|..++...... .++ ..+|..+ ..+..+|+|+|++|+++++|++++|+++.|..+. .|.... T Consensus 76 ~~~le~g~~~~r~~~~~~~~v~~~~~~~~~~~tp~~~t~~~~l~~i~~tqsad~~~~~~~~~~p~~L~R~~~~-~w~~~~ 154 (594) T protein:vir:10 76 DVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNN-AWQFVN 154 (594) T ss_pred eEEEEEcCCeEEEEecCcEEEEccCCCcccccccceeeccCCccceEEEEEeeEEEEEcCCCCceEEEEccCC-CceEEe Confidence 999999999999998877543221 111 1222211 1346789999999999999999999886655321 111000 Q ss_pred cceEeecCCcCCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcccccceeEEECCceEEEEECCCCcc Q lcl|Aclame:pro 151 DGLINVRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQI 230 (794) Q Consensus 151 ~~~~~v~~g~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~tv~~~~~~~~v~~~~~~~~ 230 (794) . T Consensus 155 ~------------------------------------------------------------------------------- 155 (594) T protein:vir:10 155 M------------------------------------------------------------------------------- 155 (594) T ss_pred c------------------------------------------------------------------------------- Confidence 0 Q ss_pred ceeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceE Q lcl|Aclame:pro 231 DSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPH 310 (794) Q Consensus 231 ~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~ 310 (794) . |.. T Consensus 156 ---~--------------------------------------------------------~~~----------------- 159 (594) T protein:vir:10 156 ---H--------------------------------------------------------TGA----------------- 159 (594) T ss_pred ---c--------------------------------------------------------cCc----------------- Confidence 0 000 Q ss_pred EEEEecCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeeec----CCeEEEEccCCcccccccccccCC Q lcl|Aclame:pro 311 ALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLS----GENIILSRTAKYFNFYPASIANLS 386 (794) Q Consensus 311 ~lv~~~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~----~~~v~~S~~gd~~nF~~~s~~~~~ 386 (794) .+.+|. ..+||++|+||||||+|++ |++|||||+|||+||+++++. . T Consensus 160 ------------~p~~~~---------------~~~~p~~v~f~q~RL~f~~~~~~p~~v~~Srtgd~~nF~~~~~~--~ 210 (594) T protein:vir:10 160 ------------VPAEWS---------------PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTAN--N 210 (594) T ss_pred ------------cccccc---------------CCccceEEEEEeeeEEEEeCCCCCceEEEEecccccccccCCCC--C Confidence 000000 1368999999999999997 689999999999999999854 6 Q ss_pred CCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCC--CcccccceEEEEeeeecccCCCCcEEeCCeEEEEecC Q lcl|Aclame:pro 387 DDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS--GTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPR 464 (794) Q Consensus 387 d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~ 464 (794) |||||++++ +++.+.| |+++++++|+|||+++||.|+++ ++|||+|++++++|.+ +++.|+|+.+|+.++|+|++ T Consensus 211 ddd~i~~~~-s~~~~~~-~~v~~~~~L~i~t~~~e~~l~~~~~~~lTp~~~~~~~~s~~-g~~~~~P~~vg~~~~fv~~~ 287 (594) T protein:vir:10 211 PNDPISFVG-IMEGTPC-WIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQ-GTAAVQGIPAEEQVIFCSRN 287 (594) T ss_pred CCccEEEEE-ecccceE-EEEecCCceEEEecCceEEEecCCCcccccceEEEEEeeee-ccCCCcceeeCCeEEEEcCC Confidence 999999954 5565555 55677889999999999999885 5899999999999976 66799999999999999999 Q ss_pred CCeEEEEEEeeeeccccceehhHHHHHHHHhcC-------CCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEecCCceeE Q lcl|Aclame:pro 465 SSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIP-------NGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQ 537 (794) Q Consensus 465 g~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v 537 (794) |+ +++||.+. +..++|.+.|+|+|++|||+ ++++.++++++|+.+ +||+++||+|.+++|+ +||+| T Consensus 288 g~--~vre~~y~-~~~d~y~~~dlt~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~-~~~v~~dG~l~~~ty~---~eq~v 360 (594) T protein:vir:10 288 KS--KVYAMNYV-REQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKS-LWVVLENGQINYCCFD---RTTDT 360 (594) T ss_pred CC--EEEEEEEe-eccCceeccchhhhhhhhcCccccccCceEEEEEEecCCceE-EEEEeCCCeEEEEEEe---cccce Confidence 86 45566544 56788999999999999974 456677766666554 6899999999999996 89999 Q ss_pred EeEEeeec-CCCeEEEEEE--EcCCEEEEEEEeC--CCEEEEEE--EEeeccccCCCCccceeeeeeeEEeecCcceecc Q lcl|Aclame:pro 538 QSWSHWDF-GENVQVLACQ--SISSDMYVILRNE--FNTFLARI--SFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDD 610 (794) Q Consensus 538 ~aW~~w~~-~g~~~~~~~~--~~~d~ly~vv~r~--~~~~~~~~--~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~ 610 (794) .|||||++ +|.++++|+- ..+|++|++|+|. +++..+++ .|++++........++|+||..++.. T Consensus 361 ~aWs~~~~t~G~v~~va~i~~~~~d~l~~~V~R~~ti~g~~~~y~~lE~~~~~~~~~~~~~~~~d~~~~~~~-------- 432 (594) T protein:vir:10 361 KAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQNG-------- 432 (594) T ss_pred eeeEeeccCCCcEEEEEEeecCCCCEEEEEEEECCccccceeeEEEeecCCCccccccccceeeeecccccc-------- Confidence 99999995 7888888773 4589999999994 57888876 67777766666666789999876532 Q ss_pred ceeeEEEcccccCCcccceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCc Q lcl|Aclame:pro 611 TFTTSIHIPTIYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADD 690 (794) Q Consensus 611 ~~~t~~~~~~~~g~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~ 690 (794) .+.|++|+||++|.+.+||...+...+..|. .++...++.++++|||||+|+++++++||+++.++|+ T Consensus 433 ---------~vsgl~hLeg~tv~v~aDG~~~~~~~V~~g~---itL~~~~~~~~~~v~VGl~Y~s~i~~lp~~~~~~~gs 500 (594) T protein:vir:10 433 ---------DVLNLDRYIGRTAVIFSKYGLEAEVEVNNIG---LTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKS 500 (594) T ss_pred ---------eeecccccCCceEEEEeCCeecCCeEEcCCe---eEeeccCCCCcceEEEeeeeeEEEEeecccccCCccc Confidence 1348999999999999999998887776543 2344567788999999999999999999999998886 Q ss_pred cceeeeeeccEEEEEEEEEeeccceEEEEEccCCCcceeeecCceecccccccCccccccceE--EEEeccccceEEEEE Q lcl|Aclame:pro 691 GSTSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQY--RFPVVGNAKFNTVYI 768 (794) Q Consensus 691 ~~~~~~~~~r~~l~~~~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~--~vp~~~~~~~~~v~i 768 (794) .+++ |+||+++.|++.+|.++.+..+.... ... .........+..+.|++.+|.. .++..+|+++.+|+| T Consensus 501 ~~g~-----r~ri~r~~v~~~~S~g~~vg~~~~~~--r~~-~~~~~~~~~~~~g~~~~~tg~~~v~~~~~G~~~~~~i~I 572 (594) T protein:vir:10 501 MFGS-----KIRISKVQLALFDSIEPTVNGEPADD--RST-DDIMDARLLDFSSNSGSSNGTRLVDYNPLGWENDGKMVI 572 (594) T ss_pred ccCc-----cEEEEEEEEEEEcceeeEECCccccc--ccc-hhhccccCCcccCcccccCCceEEEEccCCcCcccEEEE Confidence 5554 88999999999999998876543211 111 0111112335566777777765 455679999999999 Q ss_pred EECCcCCEEEEEEEEEEEEecc Q lcl|Aclame:pro 769 LSDETTPLNIIGCGWEGNYLRR 790 (794) Q Consensus 769 ~~~~p~P~tvlai~~eg~y~~r 790 (794) +|++|+||+||||.+|...++- T Consensus 573 ~qd~PlPltvlai~~ev~~~~~ 594 (594) T protein:vir:10 573 AVEQPFLCEVVGVFSVVQSNKV 594 (594) T ss_pred EECCCcCEEEEEEEEEEEeccC Confidence 9999999999999999999998 No 26 >protein:vir:94602 Length: 1012 # NCBI annotation: PfWMP4_35 # Family: family:all:12083 # MgeID: mge:1525 # MgeName: Pf-WMP4 # Cross-refs: genbank:acc:YP_762665;genbank:gi:115304373;genbank:GeneID:5142302 Probab=99.70 E-value=8.7e-15 Score=97.67 Aligned_cols=762 Identities=14% Similarity=0.145 Sum_probs=322.8 Q ss_pred Cce-----eeeechhhhcc--cccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCC Q lcl|Aclame:pro 1 MAL-----ISQSIKNLKGG--ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDE 73 (794) Q Consensus 1 Ma~-----v~~~~~s~~~G--vS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~ 73 (794) |-. +++...+=.+| +|.-+-..-|. +---..||=++..|-+.||.|++.+....-..+ ..+++-+|+.--- T Consensus 1 mtqQQ~~eiqG~~t~~F~GL~~s~S~~~IP~~-~SP~~~N~DV~~~G~V~rR~GT~l~~~Y~inn~-s~~~~s~~irt~L 78 (1012) T protein:vir:94 1 MTQQQATEIQGPFTREFSGLDISNSVGAIPVS-GSPVFHNCDVSDDGAVVRRRGTALVNTYNINNA-SGRAWSDTIRTKL 78 (1012) T ss_pred CCcccccccccccccccccccccccccccccc-CCCceEEeecccCcceeehhhhhhhhhhccccc-Ccceeeeeehhhc Confidence 432 22222222333 22222111121 223467999999999999999999976542221 2344556655444 Q ss_pred CceEEEEEeCCceEE-EEcCCeEEEEEcCccccee-e---cCCCcCceEEEEE---cCEEEEEeCCcceEEE---Eeccc Q lcl|Aclame:pro 74 HEQYYAVFTGSGIRV-FDLSGNEKQVRYPNGSNYI-K---TANPRNDLRMVTV---ADYTFIVNRNVVAQKN---TKSVN 142 (794) Q Consensus 74 ~~~y~l~~~~~~~rv-~~~~g~~~~v~~~~~~~y~-~---a~~~~~~l~~~q~---aD~~~l~~~~~~p~~~---~~~~~ 142 (794) .-.|.+.-.++++-+ --.+|. .|.++-..... . ...+.+..-|.-+ -|.+.|.-+++||-.+ .+... T Consensus 79 G~eYfiLs~~~GLL~~~~~~~~--AVG~~K~~a~V~~ss~~~V~Pssm~F~~~S~~~~R~LILT~~~~~VQ~~F~E~T~s 156 (1012) T protein:vir:94 79 GSEYFILSNDVGLLISLMRDDE--AVGMPKEVAVVSKSSIWTVPPSSMCFIPVSAPYDRLLILTPEHPIVQLSFLERTLS 156 (1012) T ss_pred cceeEEEecCCceEEEeeeccc--ccccchhhhhhhhhhccccCCcceEEEeccCCCCcEEEEcCCCceEEEEEeeeeee Confidence 555544444444333 222321 22222111111 0 1113333334333 3678888888887543 11111 Q ss_pred CCCCCCCccc-------------eEee--------cCCcCCceeEEEecCceEE---EEEeeccc-CCcccccc------ Q lcl|Aclame:pro 143 LPNYNPNQDG-------------LINV--------RGGQYGRELIVHINGKDVA---KYKIPDGS-QPEHVNNT------ 191 (794) Q Consensus 143 ~~~~~~~~~~-------------~~~v--------~~g~y~~~y~vti~~~~~~---t~tt~~~s-~~~~~~~s------ 191 (794) .+.-.+...+ ..|. --.+-+.+|.++++..+-. ++....+. +.-+.... T Consensus 157 ~T~~t~~~~~V~~~~a~~~~~~~~L~~~~N~sS~~~~~~~~T~~AmT~~NP~~S~~ls~~~V~~qtytltirqi~W~WWA 236 (1012) T protein:vir:94 157 FTCTTNHGGGVFSFTAPISVNDTTLWRDTNASSYIVTDAAGTVYAMTQKNPDFSFRLSGSFVVGQTYTLTIRQITWQWWA 236 (1012) T ss_pred eeccCCccceEeecccceeecCeeEEecccccceeEeeccceEEEEEeeCCceeEEEEEEEecCcccceeehhhhhhhhh Confidence 1111110000 0111 1112234555555433210 11000010 00000111 Q ss_pred -cchhhhhhhhhh---hcccccceeE---------------EECCceEEEEEC----CC-----CccceeEeecccCcce Q lcl|Aclame:pro 192 -DAQWLAEELAKQ---MRTNLSDWTV---------------NVGQGFIHVTAP----SG-----QQIDSFTTKDGYADQL 243 (794) Q Consensus 192 -~~~~ia~~l~~~---~~~~~~~~tv---------------~~~~~~~~v~~~----~~-----~~~~~~~~~dg~~~t~ 243 (794) +..|..++..+. +........+ +.++-.+.+... ++ +.......+-|+++.. T Consensus 237 ESm~~~G~~~~~~~SRFNV~~~DQ~V~IP~~L~tDiD~v~~~~~~~~l~~~~ss~F~~~~~~~~T~~P~~AD~YG~~~G~ 316 (1012) T protein:vir:94 237 ESMYYEGQDMMQNTSRFNVTSIDQNVKIPDRLITDIDPVYKNSQGLGLFVFWSSRFDSNGWAGPTTSPNTADEYGFSGGG 316 (1012) T ss_pred hhHhhhhhHHHhhhhhcccccccccccchhHHhhhhhhhhhccCCccEEEEEeeeecCceeecCCCCCCCcccccccCCc Confidence 222333333221 1111111110 000001111111 00 0000000111111110 Q ss_pred ----eeeEEE-Eeee---------eee---eccccCC---CeEEEEEcCCCCCcceEEEEEeccCc-------------e Q lcl|Aclame:pro 244 ----INPVTH-YAQS---------FSK---LPPNAPN---GYMVKIVGDASKSADQYYVRYDAERK-------------V 290 (794) Q Consensus 244 ----~~~~~~-~v~~---------~~~---l~~~~~~---g~~v~i~~~~~~~~~~yyv~~~~~~~-------------~ 290 (794) ++.... ..+. +.. .|....+ -...+.-...++..++.-|.-+...- . T Consensus 317 ~~tpp~~~~~A~L~~aPFF~TFG~~~s~TP~P~~~V~iLR~RELRFN~G~GA~~~~L~V~~D~~~~t~Nnvpfspsnfqt 396 (1012) T protein:vir:94 317 RFTPPSLVPGATLQAAPFFITFGGIYSGTPTPINQVNILRLRELRFNGGTGAKPDDLQVYNDTVEHTWNNVPFSPSNFQT 396 (1012) T ss_pred eeccccccccceeeccceEEEeccccCCCCCChhheeeeeeeeeeeccCCCCCCcceEEEEcceeeeccccccCcccccc Confidence 010000 0000 000 0000000 00122223333334444333332221 2 Q ss_pred EEEeec-cccee----------------eEecCc------ceEEEEEecCCceE-EeeccccccccCCcccccC------ Q lcl|Aclame:pro 291 WTETLG-WNTED----------------QVLWET------MPHALVRAADGNFD-FKWLEWSPKSCGDVDTNPW------ 340 (794) Q Consensus 291 w~e~~~-~~~~~----------------~~~~~t------~p~~lv~~~~~t~~-~~~~~w~~r~~gd~~s~p~------ 340 (794) |..++. -.+.. .+.-+| .|..|.-.+..++. ...--|...+-.|.-+-.- T Consensus 397 ~atT~~~T~R~~~L~~A~G~~~~~A~Y~A~~GATnnlpanaPL~IS~~sA~s~~~~~R~v~~~~~~T~~~~~~G~Y~r~Y 476 (1012) T protein:vir:94 397 WATTYTATDRVITLMSAVGDRFNNANYFAILGATNNLPANAPLHISCLSASSYLGGSRRVWYRNLPTTGGTLDGCYVRAY 476 (1012) T ss_pred eeeeeeecceeEEEeeeccccccCcceEEEeecccccccCCccccccccceeeeccceeeeeeccccCCceEeeeEEEEE Confidence 333221 11111 111111 11111100000000 0000121111111000000 Q ss_pred ------chhcCCCceEEEEEccceeeec----CCeEEEEccCC------cccccc-cccccCCCCCcEEEEEcCCcceee Q lcl|Aclame:pro 341 ------PSFVGSSINDVFFFRNRLGFLS----GENIILSRTAK------YFNFYP-ASIANLSDDDPIDVAVSTNRIAIL 403 (794) Q Consensus 341 ------psf~g~~p~~v~f~q~RL~~~~----~~~v~~S~~gd------~~nF~~-~s~~~~~d~D~i~~~~~s~~~~~i 403 (794) -.-.|.+|.-.+.||.||++.+ +..+.+|..|| ++||+. +..+.-.|.||+++.++|.-.+.| T Consensus 477 GiG~~~~Y~~~~F~~I~TiY~~RLiL~~~s~~~~~~~~S~~GD~~~~G~~Y~F~QiTD~L~G~~tDPF~L~VtSe~~e~i 556 (1012) T protein:vir:94 477 GIGKYVDYSKRSFHAIGTIYRDRLILVNPSTATDQLLISEIGDATVPGEFYQFMQITDMLQGVTTDPFTLNVTSEGRERI 556 (1012) T ss_pred EeeeeeecCCccccceeeeeeeeeEEeccCCCcceEEEeecCCcccCceeeeeeeeehhhccCcCCceeEEEccccccee Confidence 0112556999999999999987 67899999887 889886 555777899999999999888889 Q ss_pred eeeecCCCcEEEEecCcEEEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeccccce Q lcl|Aclame:pro 404 KYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVK 483 (794) Q Consensus 404 ~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~~~~~~~~~~~~~ 483 (794) ..++..++.|++||..+-|.+.|++.++|..-.++.+|+|+.-+.---|+..-.|+|..+.| ++.+..-- .+++| T Consensus 557 T~~~~WQ~~LFV~T~~~T~~~~GGe~~~~s~~~VN~vSt~G~~N~~~VV~T~~~V~Ym~~~G----~F~L~~k~-~~~~Y 631 (1012) T protein:vir:94 557 TAVTGWQKRLFVFTGSNTYSIEGGEQFGESSYAVNLVSTYGAFNQNCVVVTNLTVLYMNKFG----LFDLMNKP-NTDSY 631 (1012) T ss_pred eeeeeeceeEEEEeccceEeeccccccchhHHHHHhHHhhcccCcceEEEeeeEEEEeeccc----eeeccCCc-cCCcc Confidence 99999999999999999999999999999999999999997766666788889999998876 77776644 46789 Q ss_pred ehhHHHHHHHHhcCCC-------cEEEEEcCCCCeEEEEEEcC-----CCeEEEEEeEecCCceeEEeEEeeecCCCeEE Q lcl|Aclame:pro 484 NAEDITSHVPNYIPNG-------VFSICGSGTENFCSVLSHGD-----PSKIFMYKFLYLNEELRQQSWSHWDFGENVQV 551 (794) Q Consensus 484 ~~~dls~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~-----~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~ 551 (794) .+.+-|..+.++|..- ..+|.+.+..+-+.+...++ ...+|+|-+.| .+|+..+..|.++. T Consensus 632 ~A~ErSvKIR~~F~~~~~ss~~~~~Wl~~~e~~~~LYi~L~~~~dT~~~S~~~~~N~~~-------DSWs~~~s~~~Fq~ 704 (1012) T protein:vir:94 632 GAFERSVKIRGLFQNLAGSSGDNLHWLRYNESSNKLYIGLAAEGDTRTTSRNLMLNFTW-------DSWSTLSSAAPFQM 704 (1012) T ss_pred hhhhhhhhhhhhhhhhccccccceeeeeeccCCceEEEEecCCCcchhhhhhhhhhhhh-------cchhhhhccCCccc Confidence 9999999999988531 11222222222222211111 11123333321 26877777777753 Q ss_pred EEE--EEcCCEEEEEEEeCCCEEEEEEEE----eecccc--------------------CCCCc------cceeeeeeeE Q lcl|Aclame:pro 552 LAC--QSISSDMYVILRNEFNTFLARISF----TKNAID--------------------LQGEP------YRAFMDMKIR 599 (794) Q Consensus 552 ~~~--~~~~d~ly~vv~r~~~~~~~~~~~----~~~~~~--------------------~~~~~------~~~~lD~~~~ 599 (794) -.. .+..+...+.+.-....|+.+... .++.+. ..++. ...-+|--++ T Consensus 705 YP~V~~~~~~t~L~~i~~~~TV~ML~~~~~~YiDFatirthiypF~~CaG~~~~~Vms~~~GIY~~~~P~tP~I~~~tit 784 (1012) T protein:vir:94 705 YPAVQLFKYMTWLTNINAPLTVAMLATEMPFYIDFATIRTHIYPFTFCAGQRDVSVMSDSRGIYNLPLPVTPGILDYTIT 784 (1012) T ss_pred chhhhhhhhhhhhhhhcCchhhhhhhhccceeeeeehhcccccceeeeccceeeEEEecCCceEEecccccceeeeeEee Confidence 221 111222112222222222211000 000000 00000 0011222111 Q ss_pred EeecCc--cee-----ccceeeEEEcccc--------cCCcccceEEE-EEecCCceecce--------------eeecc Q lcl|Aclame:pro 600 YTIPSG--TYN-----DDTFTTSIHIPTI--------YGANFGRGKIT-VLEPDGKITVFE--------------QPTAG 649 (794) Q Consensus 600 ~~~~~~--t~~-----~~~~~t~~~~~~~--------~g~~~~~~~~v-~~~~~g~~~~~~--------------~~~~~ 649 (794) .+...+ +|. +++..-++-.|.. .+ +...++.+ .+..||-..... ++.+| T Consensus 785 ~ss~~~~k~Yq~~T~~~GT~tLt~~~~~~~~~~~l~LL~-~~~~~~~~a~V~~~~~~~~TT~~TV~~N~~~~lQ~T~~~G 863 (1012) T protein:vir:94 785 ASSKAGAKTYQRNTASAGTETLTLRNPMMDYADTLELLG-GNVNASQFAMVMSNGFEPYTTYPTVTYNGVAPLQWTVTGG 863 (1012) T ss_pred ccchhhhheeccccccccceeeeecChhhhcCcEEEEec-CCCCccEEEEEeecccccccccceEEecceeeeeEEEecC Confidence 111110 111 1111111111111 01 11122222 222222211100 11111 Q ss_pred ccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccE-EEEEEEEEeecc--ceEEEEEccCCCc Q lcl|Aclame:pro 650 WNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRL-QLRRAWVNYENS--GTFDIYVENQSSN 726 (794) Q Consensus 650 ~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~-~l~~~~~~~~~t--g~~~~~v~~~~~~ 726 (794) +.-.-+-.+. ....+++|.-|.|.++-|-+.+ ..- +|| +|.++++.|.-+ ..++.+++..... T Consensus 864 S~L~~~~~Ls---qN~~~~~G~~Y~S~Y~SP~F~L-~SL----------~~LKr~K~~~L~~Dttvtsqlkynltsgfsq 929 (1012) T protein:vir:94 864 SGLNNRPILS---QNNNCIMGMIYPSVYASPIFDL-ESL----------GRLKRLKKLHLQMDTTVTSQLKYNLTSGFSQ 929 (1012) T ss_pred Cccccccccc---cCceEEEeecchhhhcchhhhh-hhh----------hhhhheeeeeEEeeeeeeeeeeeehhcccce Confidence 1000000111 1357899999999998554433 211 222 455666555443 3333333322110 Q ss_pred -ceeeecCceecccccccCccccc----------c--ceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEeccccC Q lcl|Aclame:pro 727 -WKYTMAGARLGSNTLRAGRLNLG----------T--GQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRSSG 793 (794) Q Consensus 727 -~~~~~~~~~~~~~~~~~~~~~~~----------t--g~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r~rr 793 (794) ......=..+-++.+..-.|... . -...+|+.+..-+.++.|.+-..-.+.+-+.+++.+= +|-+| T Consensus 930 vsvlntawvavvsnynenivpavvsyqvgnsyeirrvvelsiplqgygcdyqfyiasvgaeafklaayefdiqp-qrdkr 1008 (1012) T protein:vir:94 930 VSVLNTAWVAVVSNYNENIVPAVVSYQVGNSYEIRRVVELSIPLQGYGCDYQFYIASVGAEAFKLAAYEFDIQP-QRDKR 1008 (1012) T ss_pred eeeecceeeeeeeccCccccceeeeeecCCceeeeEEEEEeecccccccceeEeeeeccccceeeeeeeecccc-chhhh Confidence 00000000000011000001111 1 1235688899999999999999999999999887753 22222 Q ss_pred C Q lcl|Aclame:pro 794 I 794 (794) Q Consensus 794 v 794 (794) - T Consensus 1009 y 1009 (1012) T protein:vir:94 1009 Y 1009 (1012) T ss_pred h Confidence 2 No 27 >protein:vir:80177 Length: 1027 # NCBI annotation: tail tubular protein B # Family: family:all:12083 # MgeID: mge:1878 # MgeName: Pf-WMP3 # Cross-refs: genbank:acc:YP_001285795;genbank:gi:148747829;genbank:GeneID:5220453 Probab=99.44 E-value=2.6e-12 Score=84.08 Aligned_cols=726 Identities=14% Similarity=0.149 Sum_probs=288.7 Q ss_pred Cce----ee------eechhhhcc--cccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEE Q lcl|Aclame:pro 1 MAL----IS------QSIKNLKGG--ISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHL 68 (794) Q Consensus 1 Ma~----v~------~~~~s~~~G--vS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~ 68 (794) |-. -+ +...+=.+| ++.-+=..-|. +---+.||=++..|-+.||.|++.+....++ ..++.+| T Consensus 1 mvnsferrtQQ~~dlG~~s~~F~GL~~t~S~~~IP~~-~SP~~~N~DV~~~G~V~kR~GT~i~~~Y~~t----~~~~t~~ 75 (1027) T protein:vir:80 1 MVNSFERRTQQGDDLGIRSSNFGGLNTTASPLNIPYE-DSPNLLNVDVDVSGNVSKRQGTEILLKYANT----TPVYTFP 75 (1027) T ss_pred CCcchhhhhcccccccccccccccccccccccccccc-CCCceEEeecccCcceeehhhhhhhhhhccC----Cceeeee Confidence 211 00 111122233 22221111111 2234679999999999999999999765432 2456666 Q ss_pred EEeCCCceEEEEEeCCceEEEEcCCeEEEEEcCccccee-e-cCCCcCceEEE---EEcCEEEEEeCCcceEEE---Eec Q lcl|Aclame:pro 69 INRDEHEQYYAVFTGSGIRVFDLSGNEKQVRYPNGSNYI-K-TANPRNDLRMV---TVADYTFIVNRNVVAQKN---TKS 140 (794) Q Consensus 69 f~~~~~~~y~l~~~~~~~rv~~~~g~~~~v~~~~~~~y~-~-a~~~~~~l~~~---q~aD~~~l~~~~~~p~~~---~~~ 140 (794) +.---.-.|+|--..|-+.+--..|. .|.++-..... . +.+...- -|. -.-|.+.|.-+.+||-.+ .+. T Consensus 76 vks~LG~dYvLt~~~GLL~~~~~~~~--AVG~~K~~s~V~~aa~~~V~P-~F~~~S~~~~R~LILT~~~~~VQ~~F~E~T 152 (1027) T protein:vir:80 76 VKSVLGYDYVLTKSGGLLEVAGVIGK--AVGAYKSFSNVFSAAAANVKP-YFTLLSDVEPRVLILTGTNTPVQVKFVEQT 152 (1027) T ss_pred ehhhccceeeEecCCceEEEeeeccc--ccccchhhhhhhhhhhcccCc-eeEEccCCCCcEEEEcCCCceEEEEEeeee Confidence 65555667755544444444332331 22222111110 0 0111000 111 233677788788877542 111 Q ss_pred ccCCCCCCCccce-------------Eeec--------CCcCCceeEEEecCceEEEEEeecccCCcc------c---cc Q lcl|Aclame:pro 141 VNLPNYNPNQDGL-------------INVR--------GGQYGRELIVHINGKDVAKYKIPDGSQPEH------V---NN 190 (794) Q Consensus 141 ~~~~~~~~~~~~~-------------~~v~--------~g~y~~~y~vti~~~~~~t~tt~~~s~~~~------~---~~ 190 (794) ...+.-.+...+. .|.. -.+-+.+|+++++. .|+-+-.-. + |. T Consensus 153 ~t~T~~s~~~~~V~~~~s~~~~~~~~L~~~~N~tS~~~~~~~~T~~AlT~~N-------lP~~S~~mt~~~V~~~W~WWA 225 (1027) T protein:vir:80 153 FTTTSGSPTTTVVIPNASRFQYDTPILYMNRNFTSGATYSYNSTTRALTISN-------LPSWSGSMTFDLVLPVWSWWA 225 (1027) T ss_pred eeeeccCCccceEeecccceeecCeeEEecccccceeEeeccceEEEEEecc-------CCcceeEEEEeEEecchhhhh Confidence 1111111111110 1110 01112233333322 011110000 0 11 Q ss_pred ccchhhhhhhhhh---hcccccceeE---------------EECCceEEEEECC----C-----CccceeEeecccCcce Q lcl|Aclame:pro 191 TDAQWLAEELAKQ---MRTNLSDWTV---------------NVGQGFIHVTAPS----G-----QQIDSFTTKDGYADQL 243 (794) Q Consensus 191 s~~~~ia~~l~~~---~~~~~~~~tv---------------~~~~~~~~v~~~~----~-----~~~~~~~~~dg~~~t~ 243 (794) -+..|..++..+. +........+ +.++-.+.+...+ + +.......+-|+++.. T Consensus 226 ESl~~~G~~~~~~~SRFNV~~~DQ~V~IP~~L~sDlD~i~~~~~~~~m~~~~ta~F~~~~~~~~T~~P~~AD~YG~~~G~ 305 (1027) T protein:vir:80 226 ESLRWFGDRFYDAVSRFNVNKADQSVAIPAALRSDLDTIQGTYGRYPMLLYKTATFNDTYTFSNTGQPANADSYGWGDGS 305 (1027) T ss_pred hHHhhhhhHHHhhhhhcccccccccccchhHHhhhhhhhhhccCCccEEEEEeeeecCceeecCCCCCCCcccccccCCc Confidence 1223333333321 1111111100 0001011111110 0 0000000111222111 Q ss_pred eeeEEEEeeeeeeec------------------cccCC---CeEEEEEcCCCCCcceEEEEEeccCceE--EEee-cccc Q lcl|Aclame:pro 244 INPVTHYAQSFSKLP------------------PNAPN---GYMVKIVGDASKSADQYYVRYDAERKVW--TETL-GWNT 299 (794) Q Consensus 244 ~~~~~~~v~~~~~l~------------------~~~~~---g~~v~i~~~~~~~~~~yyv~~~~~~~~w--~e~~-~~~~ 299 (794) +.++-.-+.|- ....+ -...+.-...++..++..|.-+...-.| ..++ +-.+ T Consensus 306 ----~~~~~~~A~L~~sPFF~TFG~~~t~TP~P~~~V~lLR~RELRFN~G~GA~~~~L~V~~D~~~~s~N~ssT~~~T~R 381 (1027) T protein:vir:80 306 ----VYNVGASAYLNTSPFFATFGDTRTPTPQPPETVHLLRQRELRFNYGNGATGANLRVTVDGTALSANYSSTVAGTNR 381 (1027) T ss_pred ----eEeecccceeeccceEEEeccccCCCCCchhheeeeeeeeeeeccCCCCCCcceEEEEcceeeeeeeeeeeeecce Confidence 00111001110 00000 0011222223333333333322222222 2211 1111 Q ss_pred --------------------eeeEecCc----ceEEEEEecCCceEEeeccccccccCCcccccC------------chh Q lcl|Aclame:pro 300 --------------------EDQVLWET----MPHALVRAADGNFDFKWLEWSPKSCGDVDTNPW------------PSF 343 (794) Q Consensus 300 --------------------~~~~~~~t----~p~~lv~~~~~t~~~~~~~w~~r~~gd~~s~p~------------psf 343 (794) ...+.-+| +|.+-+....+.=+ .-|...+-.|.-.-.- -.- T Consensus 382 ~~~L~~A~G~~~~~A~dlayY~A~~GATPL~IS~~aA~t~~~~~R~---yi~~~~~~T~~~~~~G~Y~k~YGlG~~~~Y~ 458 (1027) T protein:vir:80 382 AYALYKADGTLCTSASDLAYYIAFTGATPLGISPTAAVTITNVDRT---YIGSAATQTDNAYVQGGYFKVYGLGLWANYG 458 (1027) T ss_pred eEEEeeeccccccccccceeeeeeeccccccccccceeeeecCcee---eeeeeccccCCceEeeeEEEEEEeeeeeecC Confidence 11111111 11111111111100 0121111111000000 011 Q ss_pred cCCCceEEEEEccceeeec----CCeEEEEccCC------cccccc-cccccCCCCCcEEEEEcCCcc-eeeeeeecCCC Q lcl|Aclame:pro 344 VGSSINDVFFFRNRLGFLS----GENIILSRTAK------YFNFYP-ASIANLSDDDPIDVAVSTNRI-AILKYAVPFSE 411 (794) Q Consensus 344 ~g~~p~~v~f~q~RL~~~~----~~~v~~S~~gd------~~nF~~-~s~~~~~d~D~i~~~~~s~~~-~~i~~~v~~~~ 411 (794) .|.+|+-.+.||.||++.+ |..+.+|.+|| ++||+. +..+.-.|.||+++.++|.|. +.|..++..++ T Consensus 459 ~~~F~~I~TvY~~RLvL~~~t~~~~~~~~S~~GD~~~~G~~Y~F~QvTD~L~G~~sDPF~L~VsSsq~~d~vT~~~~WQ~ 538 (1027) T protein:vir:80 459 TGQFPRIATVYQSRLVLGGFTNDPTRVVFSATGDTVEGGVKYNFFQVTDDLDGLDSDPFDLVVSSSQADDYVTGLVEWQS 538 (1027) T ss_pred CccccceeeeeeeeeEEeccCCCcceEEEeecCCcccCceeeeeeeeehhhccCcCCceeEEEecccccceeeeeeeece Confidence 3567999999999999987 67899999987 889886 555777899999999988554 55888999999 Q ss_pred cEEEEecCcEEEEeCCCc-ccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeccccceehhHHHH Q lcl|Aclame:pro 412 ELLIWSDEAQFVLTASGT-LTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITS 490 (794) Q Consensus 412 ~L~l~t~~~q~~l~~~~~-lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~~~~~~~~~~~~~~~~dls~ 490 (794) .|++||..+-|.+.|++. ++|..-.++.+|+|+.-+.---|+....|+|..+.| ++.+..-- .+++|.+.+-|+ T Consensus 539 ~LFV~T~~~T~~~~GGd~t~~~a~~~VN~iSs~G~~N~~~VV~T~~~V~Yl~~~G----~F~L~~r~-~~~~Y~A~EkSi 613 (1027) T protein:vir:80 539 SLFVLTRRATFRANGGDATISPARRFVNYISSLGLVNPFSVVRTDTAVFYLSDSG----VFNLTPRV-EDGEYQAIEKSI 613 (1027) T ss_pred eEEEEecceeEEeecCccccchhHHHHHHHHhhcccCcceEEEeeeEEEEeeccc----eeeccCCc-cCCcchhhhhhh Confidence 999999999999999875 999999999999997766666788899999998876 77776654 467899999999 Q ss_pred HHHHhcCCC-------cEEEEEcCCCCeEEEEEEcC-----CCeEEEEEeEecCCceeEEeEEeeecCCCeEEEE----E Q lcl|Aclame:pro 491 HVPNYIPNG-------VFSICGSGTENFCSVLSHGD-----PSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLA----C 554 (794) Q Consensus 491 ~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~-----~g~l~~~~y~~~~~e~~v~aW~~w~~~g~~~~~~----~ 554 (794) .+.++|..- ..+|.+.+..+-+.+...++ ...+|+|-++ -.+|+..+..|.++.-. + T Consensus 614 KIR~~F~~~~~ta~~~~~Wm~~~q~~~~LYv~L~~~~eT~~~S~~~~~N~~-------~DSWt~~~t~~~Fk~YtghP~V 686 (1027) T protein:vir:80 614 KIRKVFGKTTSTAVSSAAWMSFDQNRKVLYVALPRGSETTVASALYVYNTF-------RDSWTQYDTLGGFKTYTGHPYV 686 (1027) T ss_pred hhhhhhhhhccccccceeeeeeccCCceEEEEecCCCcchhhhhhhhhhhh-------hcchhhhhcccCcccccCCchh Confidence 999998531 11222222222222211111 1113333332 12688888878776431 1 Q ss_pred -EEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcccceEEEE Q lcl|Aclame:pro 555 -QSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKITV 633 (794) Q Consensus 555 -~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~~~~~~v~ 633 (794) .+..|...+.|.-....|+.+... + ..-.||--|+ +.++.-.+-+.+...+ ++|.+. ......-.+. T Consensus 687 ~~~~~~s~L~~v~~~~TV~ML~~~~---~-----~YvDFF~~CG-~~~~~Vlt~~~GIY~~--~~P~wn-sP~I~~~svs 754 (1027) T protein:vir:80 687 DTVLGDSFLLMVAYGGTVCMLKLYG---S-----RYVDFFNKCG-SFTGNVLTANSGIYTW--TAPFWN-SPVISNISVS 754 (1027) T ss_pred hhhhhhhhhhhhcCchhhhhhhhhc---c-----hhhhhhhhcc-cceeeEEecCCceeEe--eccccc-CCeeeEEEee Confidence 122344334445554444443211 0 1112233343 2222222222222222 333211 0000111111 Q ss_pred EecCCceecceeeeccccccceEEEccc-ccCCeEEE-EeeeeEEEecCc--------eeEeccCCccceeeeeeccEEE Q lcl|Aclame:pro 634 LEPDGKITVFEQPTAGWNSDPWLRLSGN-LEGRMVYI-GFNINFVYEFSK--------FLIKQTADDGSTSTEDIGRLQL 703 (794) Q Consensus 634 ~~~~g~~~~~~~~~~~~~~~~~~~i~~~-~~~~~v~v-Gl~y~s~~~~~~--------~~~~~~~g~~~~~~~~~~r~~l 703 (794) ....-.....+.++.. . .+|-| ...-.++| |- ++.+-+ +++-..++.+...++ + T Consensus 755 ~tt~~~~q~Ye~~T~~-----~-vvpydnvedlsiyvnGT----~Ls~~~~~~~~~~~i~LL~~~~~~~~~s~------V 818 (1027) T protein:vir:80 755 GTTTLAVQRYELPTDL-----Q-VVPYDNVEDLSIYVNGT----RLSFGTDWVKQGKAIYLLSDPGDGKTVSI------V 818 (1027) T ss_pred ccchhhhheecccccc-----c-cccccccccceeeecce----eEeecCchhhcCCEEEEecCCCCcceEEE------E Confidence 1111111111111110 0 01111 00111111 21 122222 233333333322211 2 Q ss_pred EE--EEEEee------ccceEEEEEccCCCcce--eeecCceecccccccCccccccceEEE----------Eec----- Q lcl|Aclame:pro 704 RR--AWVNYE------NSGTFDIYVENQSSNWK--YTMAGARLGSNTLRAGRLNLGTGQYRF----------PVV----- 758 (794) Q Consensus 704 ~~--~~~~~~------~tg~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~tg~~~v----------p~~----- 758 (794) -| +++++. .+-.-.+.++......+ +...|..|.-. +-+....+++ |+. T Consensus 819 prcpvnvsy~~~~~~~~TT~~TV~~N~~~~iQ~Tdy~~~GS~L~~~------~~LtN~~~~~G~~Y~S~Y~SP~F~L~SL 892 (1027) T protein:vir:80 819 PRCPVNVSYQGDVTFDETTAQTVWVNNLLQIQGTDYTLSGSTLTFT------DTLTNAVVEVGNAYISYYQSPMFLLGSL 892 (1027) T ss_pred ecccccccccccccccccccceEEecceeeeccceeeeccCccccc------cccccceEEEeecchhhhcchhhhhhhh Confidence 22 222222 12222333333222111 22223222211 1111111111 221 Q ss_pred ---cccceEEEEEEECCcCCEEEEEEEEEEEEecc-----ccCC Q lcl|Aclame:pro 759 ---GNAKFNTVYILSDETTPLNIIGCGWEGNYLRR-----SSGI 794 (794) Q Consensus 759 ---~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r-----~rrv 794 (794) ++-+..-+.+-.++-||..-++=--.|+=..- .-|- T Consensus 893 ~~LKk~K~~~L~~Dnedvlpvytigdlasgqdvddlvgkwktra 936 (1027) T protein:vir:80 893 SNLKKVKHVYLYFDNEDVLPVYTIGDLASGQDVDDLVGKWKTRA 936 (1027) T ss_pred hhhhheeeeEEEEcCCcceeeeeeccccCCCchhHhhhhhcccc Confidence 11223334445555555543321111111000 0000 No 28 >protein:vir:2625 Length: 715 # NCBI annotation: gp27 # Family: family:all:5234 # MgeID: mge:55 # MgeName: SIO1 # Cross-refs: genbank:acc:NP_064766;genbank:gi:9964636;genbank:GeneID:1263056 Probab=99.04 E-value=4.4e-09 Score=66.39 Aligned_cols=634 Identities=12% Similarity=0.114 Sum_probs=273.4 Q ss_pred Cceee--eechhhhcccccCCchHhhh-hhhhhhhcceeeccCCceeCCchHhhhh--hccCCCCccCc--EEEEEEe-- Q lcl|Aclame:pro 1 MALIS--QSIKNLKGGISQQPDILRYP-DQGSRQVNGWSSETEGLQKRPPLVFLNT--LGDNGALGQAP--YIHLINR-- 71 (794) Q Consensus 1 Ma~v~--~~~~s~~~GvS~q~D~~ry~-~q~~~~~N~~~~p~gGl~rRpGt~fv~~--l~~~~~~~~~~--rl~~f~~-- 71 (794) |++-. -...-|++|+=--.-+.-|| +..-.-+||.....|--+||-|+-|-.. |.+-..+ +++ ..+.+.- T Consensus 1 m~~~~~~~~vNtFv~GliTEas~ltfpqnasiDe~N~~l~rdG~r~RR~g~~~E~~~vls~~~vp-~galv~~~~W~na~ 79 (715) T protein:vir:26 1 MPQSLTQRTVNTFIKGLITEASELTFPENASVDELNCSLGRDGTRRRRKAVTLEDNHVLSDVVVP-EGALVQTLDWYNVA 79 (715) T ss_pred CCcccchhHHhhhhhheeeccccccCCccceeeeeeeeecCCCcchhhccceeecceEEEEEeec-Cceeeeeechhhcc Confidence 99733 45678999943333333444 3444678999999998899988854321 0110111 111 1111111 Q ss_pred CCCceEEEEEeCCc-eEEEEcCCeEEE-EEcCcc--cceeecC---CCcC-ceEEEEEcCEEEEEeCCcceEEEEecccC Q lcl|Aclame:pro 72 DEHEQYYAVFTGSG-IRVFDLSGNEKQ-VRYPNG--SNYIKTA---NPRN-DLRMVTVADYTFIVNRNVVAQKNTKSVNL 143 (794) Q Consensus 72 ~~~~~y~l~~~~~~-~rv~~~~g~~~~-v~~~~~--~~y~~a~---~~~~-~l~~~q~aD~~~l~~~~~~p~~~~~~~~~ 143 (794) .+-..-||++--++ +.+|...+.... -...+. ..+-.+. -+.+ .++++.+..++.|+||..-|-.+.-.. T Consensus 80 G~v~~~~livqvg~~l~f~q~t~~pLs~~n~~~svdl~~~~~~vn~SPsh~~v~v~~~~G~livanp~i~~~~~~~d~-- 157 (715) T protein:vir:26 80 GQVNLEFLVVQVNNILYFYEKSTDPLSANKYSGSVDLNTHSASNNLSPSEERVQVTSLNGYLIVASPAINTFYLGFNT-- 157 (715) T ss_pred cccCcEEEEEEeccEEEEEeccCCccccCceeEEeeecceecccccccceeEEEEEEeeeEEEEecCCccEEEEEecC-- Confidence 11233444443333 444443331110 000000 0111111 1222 577788889999999988875432221 Q ss_pred CCCCCCccceEeecCCcC---CceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhccc-ccceeEEECCce Q lcl|Aclame:pro 144 PNYNPNQDGLINVRGGQY---GRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTN-LSDWTVNVGQGF 219 (794) Q Consensus 144 ~~~~~~~~~~~~v~~g~y---~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~-~~~~tv~~~~~~ 219 (794) +..+..+.- +-++.-.+ |..|....+ .....+..+.+- .-.|.+..-+. ...|..+..+.+ T Consensus 158 ~t~s~t~~~-ll~r~r~f~~qg~d~~~g~~-------------y~~~gt~~tn~~-iynlyN~gw~~p~gt~~~N~~~~y 222 (715) T protein:vir:26 158 STEAFTATS-ISFKERDFEWQGSDVDVTSL-------------YFGEGTSVSNQR-IYDTYNVGWVGPKGSAALNTYGSY 222 (715) T ss_pred CcceeEeeE-EEEEeeeheeeccccccccc-------------cccCCcccCchh-heecccceeecceeEEEEcCCCCc Confidence 101110000 11111111 111111000 000000000000 00011110000 011111111121 Q ss_pred EEEEECCCCccceeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccc Q lcl|Aclame:pro 220 IHVTAPSGQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNT 299 (794) Q Consensus 220 ~~v~~~~~~~~~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~ 299 (794) + |+.....-..+...++ .+++ .. .|.|.- T Consensus 223 i-Vypa~s~~~~S~kd~n----~afs-------------k~-----------------------------ad~ei~---- 251 (715) T protein:vir:26 223 I-VYPALTHPWYSGKDAN----GAFN-------------KA-----------------------------DWLEIY---- 251 (715) T ss_pred e-EecccccccCCCcccc----cccC-------------hh-----------------------------hccccc---- Confidence 1 1111111111000000 0000 00 011110 Q ss_pred eeeEecCcceEEEEEecCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeeec------CCeEEEEccCC Q lcl|Aclame:pro 300 EDQVLWETMPHALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLS------GENIILSRTAK 373 (794) Q Consensus 300 ~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~------~~~v~~S~~gd 373 (794) ++-.....-|.+ .++.-+.+ .....+. ..+.|+|+..|.+|.+|++ +..|.+||.=+ T Consensus 252 -tGt~~~~~G~yi---~D~~~~g~------~~leeev-------~k~R~rsv~~yaGrV~yagiD~dkng~rilfSqLv~ 314 (715) T protein:vir:26 252 -TGSSLASNGHYV---LDVFNKAR------TGLTTEV-------ETGRFRSVAAYAGRVFYAGIDSAKNGGKVYFSRLTE 314 (715) T ss_pred -cccccccCceEE---EeeeecCC------ccchhhh-------hcCCCcceeeecceEEEeecccccCCCeEEEehhhc Confidence 000000000000 01000000 0000000 0356778999999999995 44899998543 Q ss_pred --------ccccccccc--ccCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCC-CcccccceEEEEeee Q lcl|Aclame:pro 374 --------YFNFYPASI--ANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTAS-GTLTSKSVELNLTTQ 442 (794) Q Consensus 374 --------~~nF~~~s~--~~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~-~~lTP~~~~i~~~s~ 442 (794) |.+=++++- ..+.|+|...+.+-+. -.|.-|+.++..|+||...+.|.|.|. ...|.++..+.+++. T Consensus 315 s~~di~nCyQd~DPTsee~~dLidTDGg~iri~ga--h~ii~Lv~f~~sLlvf~~NGVWAi~G~d~g~tATdY~ltKIs~ 392 (715) T protein:vir:26 315 RMSDVGNCYQVNDPTSEVLSDLLDTDGGVVRIPDA--HNIRKLHVLGASLLVFAENGVWAVAGVDNVFRATEYAITRISD 392 (715) T ss_pred chhhcccccccCCCchhhhhhhhhcCCCEEEecCC--CCceeEEEecceEEEEEecceEEEeccCCceeeeeeEEEEeee Confidence 333333331 2356888888888654 346678999999999999999999775 479999999999999 Q ss_pred ecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeccccceehhHHH-HHHHHhcCC---CcEEE--EEcCCCCeEEEEE Q lcl|Aclame:pro 443 FDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDIT-SHVPNYIPN---GVFSI--CGSGTENFCSVLS 516 (794) Q Consensus 443 ~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~~~~~~~~~~~~~~~~dls-~~~~~~~~g---~~~~~--~~~~~~~~~~~~~ 516 (794) .+|++.=.-|++|+.++|-.+.| |+.....+ ..+-+.++.|| ..|.+|.+. ..+.- ..+-..+.-++|. T Consensus 393 vg~sspnSvVvv~~~i~~WsdtG----Iyal~~Nd-~fn~~tAqNLTekTIq~~~~~I~~dk~knVtg~fd~~e~rVyW~ 467 (715) T protein:vir:26 393 VGLSNENSFVVADGIPIWWGKTG----IYAVQQSE-NLNTPTAQNLSLSTIQTLWNNISNAKKAQVTVEYDKINQRVFWF 467 (715) T ss_pred eccCCCccEEEecceEEEeeCCc----EEEEEecc-ccCcchhhccchHHHHHHHhhcchhhhcceEEEEEccCCEEEEE Confidence 99998888899999999999887 67766544 34568999999 788887533 22221 2332333344455 Q ss_pred EcCCCeEEEEEeEecCC----ceeEEeEEeeecC---CCeE-EEEE----------------------EEcCCEEEEEEE Q lcl|Aclame:pro 517 HGDPSKIFMYKFLYLNE----ELRQQSWSHWDFG---ENVQ-VLAC----------------------QSISSDMYVILR 566 (794) Q Consensus 517 ~~~~g~l~~~~y~~~~~----e~~v~aW~~w~~~---g~~~-~~~~----------------------~~~~d~ly~vv~ 566 (794) .-+..++.-|+|- + +-...|+.+|... |..- +++. ...++.+..+.. T Consensus 468 yPn~dt~vdykyd---~vLV~dLalgaFYp~~v~~~a~~~~~~ig~~~~~~~~~~~t~~~vv~~~~v~~~g~~~~v~~~~ 544 (715) T protein:vir:26 468 YPDNDESVDYKYN---NILVMDLALQAFYPWRVEDEASSTSYIIGTSYYGGLGSTSTETQVVNGADVVVNGSDNVVATLY 544 (715) T ss_pred EcCCceeeceeec---CeEEEEecccccccccccccccccceeeeeeeeCCcccccchhheeccceEEEeccceEEEEee Confidence 5445556555551 1 1112356666543 2110 0110 001222222222 Q ss_pred eC-CCEEEE-EEEEeecc---ccCCCCccceeeeeeeEEeecCcceeccceeeEEEcccccCCcccceEEEEEecCCcee Q lcl|Aclame:pro 567 NE-FNTFLA-RISFTKNA---IDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKITVLEPDGKIT 641 (794) Q Consensus 567 r~-~~~~~~-~~~~~~~~---~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~~~~g~~~~~~~~v~~~~~g~~~ 641 (794) |. ..+-.+ ++.++..+ ..+......-|||++. .....| .....++.|... T Consensus 545 r~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~dw~s---~d~~~~----------------------~~~gy~~~gd~~ 599 (715) T protein:vir:26 545 RDYLEGDSEIKLLVRDGTTGKMTFATFRGDTYLDWGS---ADYKSF----------------------AEAGYDFMGDIT 599 (715) T ss_pred cccccccceEEEEEEcCCceeEEEecccCceeeeccc---cchhhH----------------------HHhhhhhcccce Confidence 32 001111 11111110 0111222233666652 111100 001111111110 Q ss_pred ccee-eeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEEeeccceEEEEE Q lcl|Aclame:pro 642 VFEQ-PTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGTFDIYV 720 (794) Q Consensus 642 ~~~~-~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~~tg~~~~~v 720 (794) .+-- +.. ...+++..| .-|.=|-.|+ .....+-|+ ...++..+++. T Consensus 600 ~~k~~pyv----t~~~~~ted---g~v~~~~g~~-------------------p~n~sSclm--~~sw~ws~s~s----- 646 (715) T protein:vir:26 600 TFKNAPYV----TTYMRVTED---GYVASGAGYE-------------------FINPSSCLM--SVSWNLSKSGS----- 646 (715) T ss_pred eeecCceE----EEEEEEecc---cceeccCCcc-------------------ccCCcceEE--EEEeeeccCCC----- Confidence 0000 000 000111110 0000011111 111111111 11122222211 Q ss_pred ccCCCcceeeecCceecccccccCcc-ccccceEEEEeccccceEEEEEEECCcCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 721 ENQSSNWKYTMAGARLGSNTLRAGRL-NLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRS 791 (794) Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~tg~~~vp~~~~~~~~~v~i~~~~p~P~tvlai~~eg~y~~r~ 791 (794) ...+.+.+..+++..+.+.+.+- |-.+-+-...++|..+..+++|.+...-.++|++.+.-|--|+.+ T Consensus 647 ---t~~eaYk~~~~~~~~p~~~s~~~yp~~~VvTKsriRG~Gr~~~~rf~s~~gKdlhl~Gysilg~~~~~~ 715 (715) T protein:vir:26 647 ---TPREIYKLKDVPVVNPNDLSSINYPTDTVVTKSKVRGRGRSMKFRFESVAGKDFHLVGYEVIGAKNNSY 715 (715) T ss_pred ---ChhhhheecceeeeCCCccccccCCcceeEeeeeeeccceEEEEEEEecCCcceEEEeEEEEecccCCC Confidence 11122333333333332222210 111111234678999999999999999999999999999988888 No 29 >protein:vir:3133 Length: 911 # NCBI annotation: hypothetical protein # Family: family:all:5234 # MgeID: mge:64 # MgeName: VpV262 # Cross-refs: genbank:acc:NP_640315;genbank:gi:21234408;genbank:GeneID:956056 Probab=98.15 E-value=3.5e-06 Score=50.48 Aligned_cols=668 Identities=15% Similarity=0.164 Sum_probs=254.8 Q ss_pred Cceeeeechhhh--cccccCCchHhhhhhh-hhhhcceeeccCCceeCCch-------HhhhhhccCCCCccCcE-EEEE Q lcl|Aclame:pro 1 MALISQSIKNLK--GGISQQPDILRYPDQG-SRQVNGWSSETEGLQKRPPL-------VFLNTLGDNGALGQAPY-IHLI 69 (794) Q Consensus 1 Ma~v~~~~~s~~--~GvS~q~D~~ry~~q~-~~~~N~~~~p~gGl~rRpGt-------~fv~~l~~~~~~~~~~r-l~~f 69 (794) ||.-.+...-|+ +|--..-.+..|..-+ -..+||=....|=-.||-|. +|+...... ++.| |... T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 76 (911) T protein:vir:31 1 MAARKGAVNRFTPVRGWVTEGNLANYGQDVALDVENMDIEKTGLTQRRFGLFAETSSEQFLSTFTAT----ARARGLLAV 76 (911) T ss_pred CccccccccccccceeeeecCchhhcCceeEeeeccccchhcccchhheeeeeccchhhhhhhhhhh----hhhcceeeh Confidence 887666555553 3311122444454333 35789988888888888876 444332211 1111 1111 Q ss_pred -----EeCCCceEEEEEeCCceEEEEcCCeEEEEEcCccc-------ceeecCCCc-----CceEEEEEcCEEEEEeCCc Q lcl|Aclame:pro 70 -----NRDEHEQYYAVFTGSGIRVFDLSGNEKQVRYPNGS-------NYIKTANPR-----NDLRMVTVADYTFIVNRNV 132 (794) Q Consensus 70 -----~~~~~~~y~l~~~~~~~rv~~~~g~~~~v~~~~~~-------~y~~a~~~~-----~~l~~~q~aD~~~l~~~~~ 132 (794) .......-||+|-.++ +|..... ++|.-. .-+.+..+. +-.+..--.....|.||.. T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (911) T protein:vir:31 77 KEWREAWGDKDVNMLIFHAGY-KVHVVQD-----TAPLRDANILLTIDLLEAGIKLDGVIDSPVHISVGVGFAIITNPRI 150 (911) T ss_pred hhHHHhhCCCcceEEEEecCc-EEEEEec-----ccCccccceEEEeeeeccCceeeeeecCceeEEeeceEEEeecCcc Confidence 1123344566666665 3332110 111110 011111111 1123333345677889988 Q ss_pred ceEEEEecccCCCCCCCccceEeecCCcCCceeEEEecCce-EEEEEeecccCCcccccccchhhhhhhhhhhcccccce Q lcl|Aclame:pro 133 VAQKNTKSVNLPNYNPNQDGLINVRGGQYGRELIVHINGKD-VAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDW 211 (794) Q Consensus 133 ~p~~~~~~~~~~~~~~~~~~~~~v~~g~y~~~y~vti~~~~-~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~ 211 (794) .|- +.+..+..+- +...+ .|.. .++-+.... ..-|++.. .+++ ..+-..+|. |.+. .+... T Consensus 151 ~~~-~~~~~~~~~~-----~~~~~---~~~~-~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~---~~~~---~~~~~ 212 (911) T protein:vir:31 151 EPV-LIKLDDVDDE-----GVPTL---SYEP-LTLLIRTRELLTPYTTGT-NYGD-TLTPEEEWN---LYNS---GWATI 212 (911) T ss_pred ceE-EEEeeccCcc-----Ccccc---cccc-eeeEeeehhhcccccccc-ccCc-ccCchhhcc---cccc---cceee Confidence 884 3444332221 11000 0100 000000000 00010000 0000 001111111 0000 00000 Q ss_pred e---EE-ECCceEEEEEC------CCCccceeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCc---- Q lcl|Aclame:pro 212 T---VN-VGQGFIHVTAP------SGQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSA---- 277 (794) Q Consensus 212 t---v~-~~~~~~~v~~~------~~~~~~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~---- 277 (794) + .. .+.+.+|+... -+. ..+.++- ++.- ......++-...-.++.+ +-+ +.. ++..... T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~-~~~-~~~-~~~~~~~~~~~ 285 (911) T protein:vir:31 213 TRATKDKSGSGTVYVNPVQYYFDKRGV-YPSHSVL--YNSM-KQESAKEIVALNVFSPWA-DEK-INF-GTTTPPLGRYI 285 (911) T ss_pred eeecccCCccceEEEchhheeecccCc-Ccchhhh--hhhh-hhhccceeEEEeeecccc-ccc-ccc-ccCCCchhhhh Confidence 0 00 00111111000 000 0000000 0000 000000000000000000 000 000 0000000 Q ss_pred -ceEEEEEec-------------cCceEEEeeccc-----ceeeEecCcceEEEEEecCCceEEeeccccccccCCcccc Q lcl|Aclame:pro 278 -DQYYVRYDA-------------ERKVWTETLGWN-----TEDQVLWETMPHALVRAADGNFDFKWLEWSPKSCGDVDTN 338 (794) Q Consensus 278 -~~yyv~~~~-------------~~~~w~e~~~~~-----~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~r~~gd~~s~ 338 (794) ..||..-.. .+|. .|-.||. .+++++.--...-+...+.|+.+|. T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~e~~np~gl~~igt~~n~k~~a~~~~~~~--------------- 349 (911) T protein:vir:31 286 HSAYYFDSAAILSLGIGNLTPPTSDGT-TEGSGPAEEEISNPIGLDNIGTVNNLKLIAEGTVRWT--------------- 349 (911) T ss_pred hhheeeccceeeeecccccCCCCCCCc-cCCCCCchhhhcCCCCcccccchhceeeeeccceeee--------------- Confidence 112211000 0000 0111111 1112221111122223344544432 Q ss_pred cCchhcCCCceEEEEEccceeeec-----CCeEEEEccCC--------ccccccccc--ccCCCCCcEEEEEcCCcceee Q lcl|Aclame:pro 339 PWPSFVGSSINDVFFFRNRLGFLS-----GENIILSRTAK--------YFNFYPASI--ANLSDDDPIDVAVSTNRIAIL 403 (794) Q Consensus 339 p~psf~g~~p~~v~f~q~RL~~~~-----~~~v~~S~~gd--------~~nF~~~s~--~~~~d~D~i~~~~~s~~~~~i 403 (794) +...|+|++||.+|++|+. ...|.+|+.-+ |++=++++. ..+.|+|-..+.+.. ...| T Consensus 350 -----~~~r~r~~~~yaGRVfyaD~dkngk~rIlFSqLv~sl~di~nCYQdaDPTSeee~DLIdTDGg~vri~g--ah~I 422 (911) T protein:vir:31 350 -----VKDRPRCSGYHNGHVYFGDRDKNGKTRILVSQLVNSLDNIPKCFQDADPTAEEINDLIATDGFTMYPVG--MGAP 422 (911) T ss_pred -----ecccccceeeeccEEEEeeeccCcceeEEEEeeccccccccccccCCCccccccchhhhcCCcEEecCC--CCCc Confidence 2357899999999999995 45899998653 444444432 124467777777644 4668 Q ss_pred eeeecCCCcEEEEecCcEEEEeCCC--cccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeecccc Q lcl|Aclame:pro 404 KYAVPFSEELLIWSDEAQFVLTASG--TLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSS 481 (794) Q Consensus 404 ~~~v~~~~~L~l~t~~~q~~l~~~~--~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~~~~~~~~~~~ 481 (794) +-|+.+++.|+||..++.|.|.|.+ ..|.++..|.+++..+|++.=.-|++|+.++|-++.| |..+...+.+ T Consensus 423 i~LV~~G~sLlVFcaNGVWAI~G~d~~g~TATdy~ItKIsdvGcsspNSVVvVgn~i~fWSd~G----IyaLganqfn-- 496 (911) T protein:vir:31 423 ITMVEFNKRLLLLCTNGVWAIRGTSGGGATATDFTLDKVASVEFNSPQSVVDIGTAIVFWSERG----IIAIGVNDFG-- 496 (911) T ss_pred eEEEEecCeEEEEEeCcEEEEeccCCCceeeeeeEEEEEeeeeeCCCCeEEEecCceEEeeCCc----EEEEeecccC-- Confidence 8899999999999999999998754 6899999999999999998888899999999999987 6676665543 Q ss_pred ceehhHHH-HHHHHhcCC---CcEE-EE--EcCCCCeEEEEEE--cCCCeEEEEE----eEecCCceeEEeEEeeecCCC Q lcl|Aclame:pro 482 VKNAEDIT-SHVPNYIPN---GVFS-IC--GSGTENFCSVLSH--GDPSKIFMYK----FLYLNEELRQQSWSHWDFGEN 548 (794) Q Consensus 482 ~~~~~dls-~~~~~~~~g---~~~~-~~--~~~~~~~~~~~~~--~~~g~l~~~~----y~~~~~e~~v~aW~~w~~~g~ 548 (794) -+.++.+| ..|..|... ..+. .+ +-.-++.+.|... .|.++.|.+. +.. .-...+|.+|+..+. T Consensus 497 D~tAnNLTesTIQ~y~d~I~~dkIkNVtgtyd~de~rVyW~yPn~lDe~teykt~~~~ILVf---dLatgaFYPwtvs~g 573 (911) T protein:vir:31 497 DLTSNNLTENTIDEYYDSLDRDIIKNVKGTFINDENRVYWVVPNKQDSNGEYKTDGELVLVL---NLDTGGFYKHTVSGG 573 (911) T ss_pred ccccccccHHHHHHHHhhcChhhhceEEEEEEccCCEEEEEecCccCCccceeecCceEEEE---EeccCcccceeeecc Confidence 37888888 567666532 2221 11 2222333333332 3334444421 000 112348889976532 Q ss_pred eEEEEE--------------------------------------E--EcCCEEEEE-EEeCCCEEEEEEEEeeccccCCC Q lcl|Aclame:pro 549 VQVLAC--------------------------------------Q--SISSDMYVI-LRNEFNTFLARISFTKNAIDLQG 587 (794) Q Consensus 549 ~~~~~~--------------------------------------~--~~~d~ly~v-v~r~~~~~~~~~~~~~~~~~~~~ 587 (794) -. ++. . ..+...|++ ++-+.+|+.--+.+-+ T Consensus 574 pL-l~~p~y~Lv~TreEvtvPi~~etgaiIve~gsdPV~~tl~vdttGvDg~ayLl~frdg~~g~~~f~a~~~------- 645 (911) T protein:vir:31 574 PL-LHAPFRRLVNTRAEVSIPITETDGTVITDTLGDPVTVTRTVTTTGVDGLAYFASFDDGVNGQFNFIAEHQ------- 645 (911) T ss_pred ee-ecccccccccccccceeeEEeecceEEEecCCCCeEEEEeeecccccceeEEEeeccCCcceEEEEEeec------- Confidence 11 110 0 012233444 2222223222211111 Q ss_pred Cccceeeeeee-----------------EEeecCcceeccceeeEEEccccc-----CCcccceEEEEEecCCceeccee Q lcl|Aclame:pro 588 EPYRAFMDMKI-----------------RYTIPSGTYNDDTFTTSIHIPTIY-----GANFGRGKITVLEPDGKITVFEQ 645 (794) Q Consensus 588 ~~~~~~lD~~~-----------------~~~~~~~t~~~~~~~t~~~~~~~~-----g~~~~~~~~v~~~~~g~~~~~~~ 645 (794) ..-|+|++. .|...- .+-..+|++- |.-..+.+.+ +.+.+..+.. T Consensus 646 --~~~~~dw~~~~~~~~~~y~s~~~~~y~~~~~~--------~~~~~~pyi~sy~~~~~rv~~~~y~---~~~a~~~f~~ 712 (911) T protein:vir:31 646 --PWGFADWANVPNMTRVNYSSYVDFAYEYPEVM--------IGNISLPYIHSYYLTGIRVQTEQYT---TETAHLSFHR 712 (911) T ss_pred --CCeeeccccCccccccchhHHHHhhhhhhhhh--------hhcccCceeeeeeeeeeEEecccee---eecccceeEe Confidence 112444432 111100 0111222211 1000111111 1111110100 Q ss_pred eeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeeccEEEEEEEEEeeccceEEEEEccCCC Q lcl|Aclame:pro 646 PTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGTFDIYVENQSS 725 (794) Q Consensus 646 ~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~r~~l~~~~~~~~~tg~~~~~v~~~~~ 725 (794) +... ++-.+|- +.+....|....| |. +|..-+=.+.++-.+.+ |+ ++ T Consensus 713 ~~~~---------------~~~~~~~-----~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~v-VN--GD 759 (911) T protein:vir:31 713 VQAH---------------QTTALGT-----VTFHKVDMMVSTG--MQ--------VISFHKDDLLRTEAVTL-VN--PD 759 (911) T ss_pred eecc---------------cceeeee-----eeeeeeeehhhcc--ce--------eeeeccccceeeeeeEE-Ec--CC Confidence 0000 0111111 1111111111110 00 01000001111111111 11 22 Q ss_pred cceeeecCceeccccc-ccCccccccceEEEEeccccceEEEEEEECC-----------cCCEEEEEEEEEEEEeccc-- Q lcl|Aclame:pro 726 NWKYTMAGARLGSNTL-RAGRLNLGTGQYRFPVVGNAKFNTVYILSDE-----------TTPLNIIGCGWEGNYLRRS-- 791 (794) Q Consensus 726 ~~~~~~~~~~~~~~~~-~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~-----------p~P~tvlai~~eg~y~~r~-- 791 (794) .+..+.+|..+..... ...+-|+..|+.=|- .+. +++-.+.|+- .++.++. .|-+-|-.+. T Consensus 760 AE~GtmTGWtvtaG~~d~~Ta~p~~rGSyfFa-~~n--n~n~aL~QDIDSagaaaIDAG~v~ynvS--awl~gyAaqnd~ 834 (911) T protein:vir:31 760 AETGDATGWTVTAGTLDVRTAAPLYQGSYYFW-SDS--NANFAAYQDIDPVGGGYITAGELANNVI--EAKLSWAARGNT 834 (911) T ss_pred CCCCCCCcceeeccchhhccCCchhcceEeEc-CCC--Ccchhhheeccccccceeeeccchhhhh--hhhhhhccCCCC Confidence 2344444444433221 112223455665432 111 2332333332 2233332 3666776663 Q ss_pred cC--C Q lcl|Aclame:pro 792 SG--I 794 (794) Q Consensus 792 rr--v 794 (794) -| | T Consensus 835 Dr~~l 839 (911) T protein:vir:31 835 DLGTV 839 (911) T ss_pred ccceE Confidence 34 3 No 30 >protein:vir:8837 Length: 513 # NCBI annotation: constituent protein # Family: family:all:4957 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775245;genbank:gi:27476043;genbank:GeneID:2700591 Probab=97.83 E-value=1.6e-05 Score=46.88 Aligned_cols=483 Identities=13% Similarity=0.089 Sum_probs=228.4 Q ss_pred CceeeeechhhhcccccCCchHhhhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCCceEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) Q Consensus 1 Ma~v~~~~~s~~~GvS~q~D~~ry~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~~~y~l~ 80 (794) ||...+..-.-.|.|--+.+.+-=.+.-..+.|+++. .|++.||||..=|.+--.... .-.++|. ..+..+++. T Consensus 1 ~~~~~~~~~~~~g~~~d~~p~~lp~~a~s~~~N~~~~-~~~~~~~~g~~pv~a~~~~~~----~g~~~~~-~~g~~~~~~ 74 (513) T protein:vir:88 1 MALERQEVKNPTGIVTDIAPADLPLDKWSFGNNVRFK-NGKAQKALGHSPIFDTAQAPI----LDMFPFI-RNNIPYWLL 74 (513) T ss_pred CCcCChhhcccccceeccChhhcCCCcceeeeeeeEe-cceeeecCccceeeecCCCCc----eeeeeee-cCCCeEEEE Confidence 8877777666666665555444433455778888875 588899999987743211111 1246664 567777777 Q ss_pred EeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceEeecCCc Q lcl|Aclame:pro 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) .+.+.++.++ +..- ...+. .+|. .......++++.+++++++|...+|+... .. T Consensus 75 ~~~~~~~~~~--~~t~-~dvs~-~~~~--~~~~~~w~~~~f~~~i~a~ng~~~~q~~~-~~------------------- 128 (513) T protein:vir:88 75 CSEKRLYLAD--GTTI-IDVSP-GPYS--ASVTNRWSVGSFNGVIFANDGVNPPHHLP-PT------------------- 128 (513) T ss_pred eeceEEEEec--Ccee-eeccc-ccee--ecccCceeeeeecCEEEEEcCCCcceEEc-CC------------------- Confidence 7776554443 3221 11121 2221 12223356666666666665544443210 00 Q ss_pred CCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcccccceeEEECCceEEEEECCCCccceeEeecccC Q lcl|Aclame:pro 161 YGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQIDSFTTKDGYA 240 (794) Q Consensus 161 y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~tv~~~~~~~~v~~~~~~~~~~~~~~dg~~ 240 (794) + T Consensus 129 -------------------------------------------------------------------------------s 129 (513) T protein:vir:88 129 -------------------------------------------------------------------------------E 129 (513) T ss_pred -------------------------------------------------------------------------------C Confidence 0 Q ss_pred cceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEEEEEecCCce Q lcl|Aclame:pro 241 DQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHALVRAADGNF 320 (794) Q Consensus 241 ~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~lv~~~~~t~ 320 (794) ..+++||.. | T Consensus 130 -----------~~f~dl~g~------------------------------------------------p----------- 139 (513) T protein:vir:88 130 -----------SVFRVLPNF------------------------------------------------P----------- 139 (513) T ss_pred -----------ceeeeccCC------------------------------------------------C----------- Confidence 000001000 0 Q ss_pred EEeeccccccccCCcccccCchhcCCCceEEEEEccceeeec--------CCeEEEEccCCcccc---cccccccCCCCC Q lcl|Aclame:pro 321 DFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLS--------GENIILSRTAKYFNF---YPASIANLSDDD 389 (794) Q Consensus 321 ~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~--------~~~v~~S~~gd~~nF---~~~s~~~~~d~D 389 (794) ..| .-..|.+|++||++++ |+.|+.|..+|...+ |..+.. ..+++ T Consensus 140 ----~~~-------------------~a~~i~v~~~flv~~~~t~~~~~~PnrV~wS~~~D~~~~P~~W~~t~~-t~~a~ 195 (513) T protein:vir:88 140 ----ANT-------------------TFRRLKSFKNFLIGLNVTSNSIEMPQMVWWSTSADAGGVPASWDPTDP-TKDAG 195 (513) T ss_pred ----ccc-------------------ceEEEEEEeeEEEEeecccCcCCCCceEEEecccCCcccccccccccc-cCccc Confidence 000 1134567899999864 788999999996433 222111 12222 Q ss_pred cEEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEe-CCCcccccceEEEEee-eecccCCCCcEEeCCeEEEEecCCCe Q lcl|Aclame:pro 390 PIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLT-ASGTLTSKSVELNLTT-QFDVQDRARPFGIGRNVYFASPRSSF 467 (794) Q Consensus 390 ~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~-~~~~lTP~~~~i~~~s-~~~~~~~~~Pv~vg~~v~fv~~~g~~ 467 (794) =.++ ++....|...++....|+||++.+-|.+. .++ |....+++.. .-+|.+.-.=+.+|+.++|+.+.| T Consensus 196 ~~~l---~d~~g~~v~g~~~g~~liif~e~~i~~m~y~g~---~~if~~~~i~~~~G~~~p~SI~~~~~~~ffls~~G-- 267 (513) T protein:vir:88 196 QNTL---ADTNGAIVDGVKLRDSFIIYKEDSVYSMRYIGG---LYIFQFQQLFNDVGILGPNCAIEFDGNHFVVGHGD-- 267 (513) T ss_pred cccc---CCCccceeeeeecccceEEEecccEEEEEecCC---CceEEEEeecccccccCCceeEEECCeEEEEeCCc-- Confidence 2222 33334455566777889999999999996 332 2234444443 333444444488999999999987 Q ss_pred EEEEEEeeeeccccceehhHHHHHHHHhcCC-----CcEEEEEcCCC-CeEEEEEEcC-C-------CeEEEEEeEecCC Q lcl|Aclame:pro 468 TSIHRYYAVQDVSSVKNAEDITSHVPNYIPN-----GVFSICGSGTE-NFCSVLSHGD-P-------SKIFMYKFLYLNE 533 (794) Q Consensus 468 ~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g-----~~~~~~~~~~~-~~~~~~~~~~-~-------g~l~~~~y~~~~~ 533 (794) ++.. +..+-+..+. ..+.+.|-. ....+...-.| +..++|+-.+ + .++++|-|. T Consensus 268 --f~~~---~G~~~~~Ig~---ekVdk~f~~~~n~~~~~~~~~~~d~~~~~v~~~y~s~~~~~~~~~~~~lVYd~~---- 335 (513) T protein:vir:88 268 --VYVH---NGVQKQSVID---AQVRKFFFSDINPDNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIWNWK---- 335 (513) T ss_pred --eEEe---cCceeeeccc---chhhhhhhccCCcccceEEEEEEcCcccEEEEEecCCCCCCCcccceEEEEEcc---- Confidence 3322 1111112221 233333322 22223222222 2334444111 0 345666662 Q ss_pred ceeEEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceecccee Q lcl|Aclame:pro 534 ELRQQSWSHWDFGENVQVLACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFT 613 (794) Q Consensus 534 e~~v~aW~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~ 613 (794) ++ .|+..+++... ..+.+.-+.+........... .|... T Consensus 336 ~~---~Ws~~~~p~~~--~g~~g~~~~~~~~~~~~~~~~---------------------~d~~~--------------- 374 (513) T protein:vir:88 336 EN---TWSIRDLPNVL--SGAYGIIDPKTSNLWDDDSNP---------------------WDTDT--------------- 374 (513) T ss_pred CC---eEEEEeccchh--hcccccccccccceecccccc---------------------cccch--------------- Confidence 22 46655544321 111100011111000000000 00000 Q ss_pred eEEEcccccCCccc--ceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCcc Q lcl|Aclame:pro 614 TSIHIPTIYGANFG--RGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDG 691 (794) Q Consensus 614 t~~~~~~~~g~~~~--~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~ 691 (794) ++...++... +.......++|.+..+. ..+ -.-|-++++.++.+.+.+. ++. T Consensus 375 ----~~~~~~~~~~~~~sl~~~~~~~~~~~~fd-------------~~~------~f~G~~lea~~~t~~~~~~--~~~- 428 (513) T protein:vir:88 375 ----SVWGEGSYNPAKSSMIFTSFQDAKLFLFG-------------ETS------TFSGQSFTSTLERSDIYLG--DDR- 428 (513) T ss_pred ----hhhhccccccccceeEeeeccCCceeeec-------------ccc------cccCCceEEEEEecCcccc--Cch- Confidence 0000011000 00111223333322110 000 1347788888887766542 221 Q ss_pred ceeeeeeccEEEEEEEEEeeccceEEEEEccCCCcceeeecCceecccccccCccccccceEEEEeccccceEEEEEEEC Q lcl|Aclame:pro 692 STSTEDIGRLQLRRAWVNYENSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSD 771 (794) Q Consensus 692 ~~~~~~~~r~~l~~~~~~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~ 771 (794) +- .+|+++...+...|.+.+.+.......... ... .....+. .++..++++...+-.+++|+.. T Consensus 429 ~~-------~~i~~v~~~~t~~g~~t~~vg~~~~~~~~~----~~s----~~~~~~~-~~~~~~~~r~~gRy~~~ri~i~ 492 (513) T protein:vir:88 429 MM-------KTVSAVIPHITGNGVCNIWVGNAQVQGSGI----RWK----GPYPYRI-GQDYKIDTKHVGRYIALKFDFA 492 (513) T ss_pred hh-------eeeeeeeeeeecceEEEEEEeeeccCcccc----ccc----cceeeec-ccCceEEeccCCceEEEEEEcc Confidence 11 134444444555676666654432211100 000 0000111 2234577788889999999999 Q ss_pred CcCCEEEEEEEEEEEEecc-ccC Q lcl|Aclame:pro 772 ETTPLNIIGCGWEGNYLRR-SSG 793 (794) Q Consensus 772 ~p~P~tvlai~~eg~y~~r-~rr 793 (794) .--|+++.++++|.. .| +|| T Consensus 493 ~~~~w~~~G~~ve~~--~~~g~R 513 (513) T protein:vir:88 493 SAGDWYFNGYTLEMA--PKAGMR 513 (513) T ss_pred CCCceEEeeEEEEEe--cCCCCC Confidence 999999999988865 44 555 No 31 >protein:vir:105563 Length: 396 # NCBI annotation: hypothetical protein # Family: family:all:27455 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164316;genbank:gi:56692963;genbank:GeneID:3197174 Probab=96.95 E-value=0.00024 Score=40.43 Aligned_cols=375 Identities=8% Similarity=-0.026 Sum_probs=153.5 Q ss_pred Cceeeeechhhhcc--cccCCchHh----hhhhhhhhhcceeeccCCceeCCchHhhhhhccCCCCccCcEEEEEEeCCC Q lcl|Aclame:pro 1 MALISQSIKNLKGG--ISQQPDILR----YPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEH 74 (794) Q Consensus 1 Ma~v~~~~~s~~~G--vS~q~D~~r----y~~q~~~~~N~~~~p~gGl~rRpGt~fv~~l~~~~~~~~~~rl~~f~~~~~ 74 (794) |+.+. +--|+|= |+.-.+++| -..-+|++.|+=.++.|=.+||-|.+-+....... -.+.-++-+.|... T Consensus 1 ~~~~~--~~~~~ginnv~~e~~l~~~~~~~~~~~r~a~nvdi~~~G~~~~r~~~tr~~~g~l~~--~~~~~~~~~~~~~~ 76 (396) T protein:vir:10 1 MATTS--LVPLAGINNVAEDAALQRGGESPRLYVRDAVNIDLSPAGKAQLRASVRQVTDQPFRQ--LWQSPLHGDAFGAL 76 (396) T ss_pred Cccee--eeeeecccccccccccccCCCcccceeeeeeeecccCCCchhhhccCcccCCceecc--cccCccccceeeeC Confidence 98763 3333322 455444444 44579999999999999999999987775432211 11112223333333 Q ss_pred ceEEEEEeCCceEEEEcCCeEEEEEcCcccceeecCCCcCceEEEEEcCEEEEEeCCcceEEEEecccCCCCCCCccceE Q lcl|Aclame:pro 75 EQYYAVFTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLI 154 (794) Q Consensus 75 ~~y~l~~~~~~~rv~~~~g~~~~v~~~~~~~y~~a~~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~ 154 (794) +.-+..+-++.-++|- . .....+-+.+.+..|.+|..+...+ .+ . T Consensus 77 ~~tl~~~~~~~w~~~~---------~--------v~v~~~pva~d~~~~Rvy~t~~~~p-~~-~---------------- 121 (396) T protein:vir:10 77 GDQWGKVDPHSWTFEP---------L--------AQIGEGDLSHEVLNNRVCVAGTAGI-FT-Y---------------- 121 (396) T ss_pred CceEEEEeCCeEEEEe---------e--------eeeccCchhccccCCeEEEEcCCCc-ee-e---------------- Confidence 3333222222222221 0 0111223455667788888874443 22 1 Q ss_pred eecCCcCCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcccccceeEEECCceEEEEECCCCcc---c Q lcl|Aclame:pro 155 NVRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQI---D 231 (794) Q Consensus 155 ~v~~g~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~tv~~~~~~~~v~~~~~~~~---~ 231 (794) .+ +..|.+.+-....+. ..+..+.+ + ...+. --+.+|+...-... . T Consensus 122 -~~----~~~y~L~vp~P~~a~----~~a~~Gsl---~---------------~~~~~----Y~~t~V~~~gEEs~p~~~ 170 (396) T protein:vir:10 122 -DG----AQAERLTLDTPAPPL----LVAGAGSL---S---------------QGTYG----AAVAWLRGPQESAPSLIA 170 (396) T ss_pred -eC----CcceecCcCCCcccc----cccccCcc---C---------------CceEE----EEEEEEecCCCcCccccc Confidence 11 112333221111000 00000000 0 00000 00111211111000 0 Q ss_pred eeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeecccceeeEecCcceEE Q lcl|Aclame:pro 232 SFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHA 311 (794) Q Consensus 232 ~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~~~~~~t~p~~ 311 (794) +.....+.+. +++. +++...+....+|=-+..++. .||+-.+ .| T Consensus 171 S~~v~~~gg~--------~vtl---~~~~~~~i~~~RiYrS~~~G~-~~~l~aE----------------------~~-- 214 (396) T protein:vir:10 171 FAEVTDAGAL--------EVTF---PLCLDASVTGARLYLTRANGG-ELLLAGD----------------------YP-- 214 (396) T ss_pred ccccCCCCCc--------EEEE---EcccCCCcceEEEEEeCCChh-hhhheeh----------------------hc-- Confidence 0001111110 1110 011111111112211111111 1111111 11 Q ss_pred EEEecCCceEEeeccccccccCCcccccCchhcCCCceEEEEEccceeeecCCeEEEEccCCccccc-ccccccCCCCCc Q lcl|Aclame:pro 312 LVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFY-PASIANLSDDDP 390 (794) Q Consensus 312 lv~~~~~t~~~~~~~w~~r~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~-~~s~~~~~d~D~ 390 (794) ....+|..+..+|.....-..-=-|+|.. ..+++|.+||+++.++.||+|+..-++=+. +..-++ -+ T Consensus 215 ---a~~~s~vlPs~~w~gpP~~~~gL~pmP~G-----~~~A~faGRi~~A~Gn~V~FSEp~~Ph~~~~~~~~~~--~~-- 282 (396) T protein:vir:10 215 ---LGAATVILPTLPELGRPAQFRHLSPMPTG-----KHLAYWRGRLLIARANVLRFSEALAYHLHDERYGFVQ--MP-- 282 (396) T ss_pred ---cceeeeeeecCCCCCCCccccccccCchh-----HhhhhhcceEEEEeCCEEEEecCCCCceecchhccCC--CC-- Confidence 11223444555675432221111233321 258899999999999999999999874222 221111 11 Q ss_pred EEEEEcCCcceeeeeeecCCCcEEEEecCcEEEEeCCCc--ccccceEEEEeeeeccc---------CCCCcEEeCCeEE Q lcl|Aclame:pro 391 IDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGT--LTSKSVELNLTTQFDVQ---------DRARPFGIGRNVY 459 (794) Q Consensus 391 i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~--lTP~~~~i~~~s~~~~~---------~~~~Pv~vg~~v~ 459 (794) ..|.-+.+...+|+++|+++-|.+.|.++ ++.+.....+- .-|+ +.-..+..|..++ T Consensus 283 ----------~~Iv~lapv~~gL~Vgt~~~~y~~~G~dP~sms~~~l~~~~p--vp~S~v~~p~~~~s~rs~~~~~~~~l 350 (396) T protein:vir:10 283 ----------QRITFVQPVDGGIWVGQVDHVAFLDGADPASLSVSRRASRAP--VPGSAVLVPAEVVGTNASPDGSPVAV 350 (396) T ss_pred ----------CceEEEEEecCeEEEEEcCcEEEEEcCChhHcceeecccCCC--cccchhcccchhhhcccccccCcEEE Confidence 23455667788999999999999999653 44433321111 1122 2233345688999 Q ss_pred EEecCCCeEEEEEEeeeeccccceehhHHHHHHHHhcCCCcEEEEEcCCCCeEEEEEEcCCCeEEEEEeEe Q lcl|Aclame:pro 460 FASPRSSFTSIHRYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLY 530 (794) Q Consensus 460 fv~~~g~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~l~~~~y~~ 530 (794) |.++.|-. .-. .++ ....++ .+.+.+.. ..++. + ...|+..++ ++. T Consensus 351 was~dGl~----~g~--~~G----~v~~l~---~~~i~p~~-~~A~~--------~-~~~drRy~~--~~~ 396 (396) T protein:vir:10 351 WLAENGYV----MGT--SSG----AIAEVH---AGVLAGIT-GRAGT--------S-VVFDRRLLT--AVS 396 (396) T ss_pred EccCCcEE----EEc--CCc----eeeeec---ccccCCCc-ccceE--------E-EeecCeEEE--EeC Confidence 99998832 111 111 111121 12222211 11110 0 111222211 110 No 32 >protein:vir:95475 Length: 771 # NCBI annotation: hypothetical protein ORF038 # Family: family:all:5234 # MgeID: mge:1570 # MgeName: PA11 # Cross-refs: genbank:acc:YP_001294631;genbank:gi:149408197;genbank:GeneID:5237042 Probab=96.04 E-value=0.0011 Score=36.83 Aligned_cols=661 Identities=12% Similarity=0.104 Sum_probs=262.5 Q ss_pred Cceee--eechhhhcccccCCchHhhh-hhhhhhhcceeeccCCceeCCchHhhhh----hccCCCCccCcEE----EEE Q lcl|Aclame:pro 1 MALIS--QSIKNLKGGISQQPDILRYP-DQGSRQVNGWSSETEGLQKRPPLVFLNT----LGDNGALGQAPYI----HLI 69 (794) Q Consensus 1 Ma~v~--~~~~s~~~GvS~q~D~~ry~-~q~~~~~N~~~~p~gGl~rRpGt~fv~~----l~~~~~~~~~~rl----~~f 69 (794) ||+-+ -...-|++|+=--.-+.-|| +..-.-+||.....|--+||-|+-|-.. |.+-.. ++++++ +.+ T Consensus 1 m~~~~~~~~vNtFv~GliTEas~ltfpqnasiDe~N~~l~rdG~r~RR~g~~~E~~~~~vls~~~v-pa~g~~~v~~~~W 79 (771) T protein:vir:95 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLV-PADGTIAVTSHNW 79 (771) T ss_pred CCcccchhHHhhhhhheeeccccccCCccceeeeeeeeecCCCcchhhceeeeecCCceEEEEEEe-cccceEEeeeech Confidence 99743 45678999943333333443 3445678999999999999998855321 011001 111221 111 Q ss_pred Ee--CCCceEEEEEeCCc-eEEEEcCCeEEEEEcCcccceee-cC---CCcCceEEEEEcCEEEEEeCCcceEEEEeccc Q lcl|Aclame:pro 70 NR--DEHEQYYAVFTGSG-IRVFDLSGNEKQVRYPNGSNYIK-TA---NPRNDLRMVTVADYTFIVNRNVVAQKNTKSVN 142 (794) Q Consensus 70 ~~--~~~~~y~l~~~~~~-~rv~~~~g~~~~v~~~~~~~y~~-a~---~~~~~l~~~q~aD~~~l~~~~~~p~~~~~~~~ 142 (794) .- .+-..-|+++--++ +.+|...+.... ...++. +. -+.+.|++..+..++.|+||..-|..+.-.. T Consensus 80 ~na~G~v~~~~livqvg~~l~f~q~t~~pLs-----~~n~~~~a~~nlSPsh~isv~v~~G~livanp~i~~~~~~~d~- 153 (771) T protein:vir:95 80 ENAGGEVGRWISLVQVGTELKFFQTTGETLS-----EGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDS- 153 (771) T ss_pred hhcccccCcEEEEEEeccEEEEEecCCCccc-----ccceeeeecceeccceeEEEEEeeeEEEEecCCccEEEEEecC- Confidence 11 11233444443333 444433321110 111221 21 1345588888889999999988875432211 Q ss_pred CCCCCCCccce-EeecCCcCCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcccccceeEEECCceEE Q lcl|Aclame:pro 143 LPNYNPNQDGL-INVRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIH 221 (794) Q Consensus 143 ~~~~~~~~~~~-~~v~~g~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~tv~~~~~~~~ 221 (794) +..+..+.-+ +.-+ ++.+ -.+++.+.-.. .+ .+...+..+. .++.+.. -.+|.+.. T Consensus 154 -~t~s~t~~~ll~r~r---f~~q--~~~~G~d~~~~--~~--~~~~gt~~tn----~~iynly---N~gw~~pk------ 210 (771) T protein:vir:95 154 -GSVSVTTKRLLVRDL---FGVQ--DIVNGVDLRQG--ND--IATRPTVQTN----AHIYNLR---NQTFGVPR------ 210 (771) T ss_pred -CcceeEeeeeeeeeh---hhcc--ccccccceecc--cc--cccCCcccCc----hhheecc---ccceeccc------ Confidence 1001000000 0000 0000 00111110000 00 0000000000 0000000 01111000 Q ss_pred EEECCCCccceeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeeccccee Q lcl|Aclame:pro 222 VTAPSGQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTED 301 (794) Q Consensus 222 v~~~~~~~~~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~~~~~~ 301 (794) .+...++. ....+...- .+....+ +..|.|..-+.. ..|+|...-...- T Consensus 211 ~~~~snt~-------------~~~iV~~y~----a~~g~~p------------S~sd~~N~a~~k--~~~~Ei~t~~~f~ 259 (771) T protein:vir:95 211 VTWHSNEP-------------SDPIVTFRS----AASGKFP------------SNSDSVNLALSK--RADVEPSTTDRFR 259 (771) T ss_pred cccccCCc-------------cccceEeee----ccCCCCc------------CCceeeccccch--hhccceeeecccc Confidence 00000000 000000000 0000000 000111100000 1133322211000 Q ss_pred eEecCcceEEEEEecCCceEEeeccccc-cc-cCCcccccCchhc-----------CCCceEEEEEccceeeec------ Q lcl|Aclame:pro 302 QVLWETMPHALVRAADGNFDFKWLEWSP-KS-CGDVDTNPWPSFV-----------GSSINDVFFFRNRLGFLS------ 362 (794) Q Consensus 302 ~~~~~t~p~~lv~~~~~t~~~~~~~w~~-r~-~gd~~s~p~psf~-----------g~~p~~v~f~q~RL~~~~------ 362 (794) ..+..-.|..-...+.|-|-..+..-.. +. --.+.+.|+||-. -+.-+.|+=|-.|.|+++ T Consensus 260 ~~~~~~~~~Gt~~~~~G~yi~da~~~g~~~Lt~~ve~~gr~~s~~~~~~~l~~~~t~~~~~~vaeyagRvwYag~~~~~i 339 (771) T protein:vir:95 260 AEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGASVVCEYAGRVWYAGFSGQII 339 (771) T ss_pred hhhhhhcccCcccccCcceeeehhhhcccccceeeeccccchhhhccccccccccCCCCceeEEeeeeeEEEecceeEEe Confidence 0000000000000001111000000000 00 0001123333311 134567899999999886 Q ss_pred ------C---CeEEEEccCC--------ccccccccc--ccCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcEEE Q lcl|Aclame:pro 363 ------G---ENIILSRTAK--------YFNFYPASI--ANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFV 423 (794) Q Consensus 363 ------~---~~v~~S~~gd--------~~nF~~~s~--~~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q~~ 423 (794) | ..|.+||.=| |.+=++++- ..+.|+|...+.+.+. -.|.-|+.+++.|+||...+.|. T Consensus 340 D~dkng~~~~~~ilfSqLv~s~~di~nCyQd~DPTsee~~dLidTDGg~iri~ga--h~ii~Lv~f~~sLlvfc~NGVWA 417 (771) T protein:vir:95 340 DGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGA--HDIINLVNVGSAVMVVAANGIWM 417 (771) T ss_pred eccccCCceeeeEeeehhhcchhhcccccccCCCchhhhhhhhhcCCCEEEecCC--CCceeEEEecceEEEEEecceEE Confidence 1 2489998543 333333331 2356888888888654 34667899999999999999999 Q ss_pred EeC-C-CcccccceEEEEeeeecccCCCCcEEeCCeEEEEecCCCeEEEEEEeeeeccccceehhHHH-HHHHHhcCC-- Q lcl|Aclame:pro 424 LTA-S-GTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDIT-SHVPNYIPN-- 498 (794) Q Consensus 424 l~~-~-~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~~~~~~~~~~~~~~~~~~dls-~~~~~~~~g-- 498 (794) |.| + ...|.++..+.+++..+|++.=.-|++|+.++|-.+.| |+.....++ +-+.++.|| ..|.+|.+. T Consensus 418 i~ggsd~g~tAtdY~ltKIs~vg~sspnSvVvvg~~i~ywsdtg----Iyal~~Ndf--n~~tAqnLTekTIq~~~~~I~ 491 (771) T protein:vir:95 418 IQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTRNQY--GDYVANNLTEKTIQKYYEKIP 491 (771) T ss_pred EEeccCCceeeeeeEEEEeeeeccCCCccEEEecceEEEeeCCc----eEEEeeccc--CcchhhccchHHHHHHHhhcc Confidence 954 3 47999999999999999998888899999999999887 777766654 458999999 788888643 Q ss_pred -CcEEE--EEcCCCCeEEEEEEcC---CCe--E--EEEEeEecCCceeEEeEEee---ec-CCCeEE-EE---EE----- Q lcl|Aclame:pro 499 -GVFSI--CGSGTENFCSVLSHGD---PSK--I--FMYKFLYLNEELRQQSWSHW---DF-GENVQV-LA---CQ----- 555 (794) Q Consensus 499 -~~~~~--~~~~~~~~~~~~~~~~---~g~--l--~~~~y~~~~~e~~v~aW~~w---~~-~g~~~~-~~---~~----- 555 (794) ..+.- ..+-..+.-++|...+ .+. + ++|. -...|+.+| +. .|..-+ ++ .. T Consensus 492 ~dk~knVtg~fd~~e~rvyw~yPn~~D~~~e~~t~LV~d-------LalgaFYp~~i~~~~ag~l~~~vg~~~~p~~~lv 564 (771) T protein:vir:95 492 SDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVFD-------LALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLV 564 (771) T ss_pred hhhhcceEEEEEccCCEEEEEecceecCCCcceeeeeee-------ecccccccccccccccCccceeeeeeecCccccc Confidence 22221 1222223333343211 100 1 1211 123477777 32 222200 00 00 Q ss_pred EcCCEE---------------EEEEEeC-CCEEEEEEEEeeccc----cCCCCccceeeeeeeEEeecCcceeccceeeE Q lcl|Aclame:pro 556 SISSDM---------------YVILRNE-FNTFLARISFTKNAI----DLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTS 615 (794) Q Consensus 556 ~~~d~l---------------y~vv~r~-~~~~~~~~~~~~~~~----~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~ 615 (794) ..+.++ -....|+ .-+-++.+....+.. .+....+.-|+|++. +++.+.+ T Consensus 565 ~T~~eV~v~~~~v~~tG~~vtV~~~~r~~~~~~~~y~~~~~dg~~g~~~Fa~~~~~~f~DW~s---v~~~~vd------- 634 (771) T protein:vir:95 565 ETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKS---VDGIGVD------- 634 (771) T ss_pred cccceEEecceeeEecCCceEEEEEEeeccccceEEEEEEecCCCeeEEeccccCcceeeccc---CCCcccc------- Confidence 001111 1111111 001111111100000 011111112344331 0000000 Q ss_pred EEcccccCCcccceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeE-EEe-cCceeEeccCCccce Q lcl|Aclame:pro 616 IHIPTIYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINF-VYE-FSKFLIKQTADDGST 693 (794) Q Consensus 616 ~~~~~~~g~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s-~~~-~~~~~~~~~~g~~~~ 693 (794) .+ ..+..+ ...+|+... .+-+||-. .++ +-.=++.+..|.... T Consensus 635 ----------------------y~----sy~~~g------Y~~~gd~~~---~k~~PYit~y~~~tedg~v~~~~g~~~p 679 (771) T protein:vir:95 635 ----------------------AP----AYLLTG------YLAGGDYQR---EKFVPYITFHFKKTEDGFVEDAEGDWTP 679 (771) T ss_pred ----------------------hH----HHHHhh------hhccchhee---eeccceEEEEEEeecccceecccccccc Confidence 00 000000 001111100 00011110 000 001112122221111 Q ss_pred eeeeeccEEEEEEEEEeeccceEEEEEccCCCc-ceeeecCceecccccccCccccccceE--EEEeccccceEEEEEEE Q lcl|Aclame:pro 694 STEDIGRLQLRRAWVNYENSGTFDIYVENQSSN-WKYTMAGARLGSNTLRAGRLNLGTGQY--RFPVVGNAKFNTVYILS 770 (794) Q Consensus 694 ~~~~~~r~~l~~~~~~~~~tg~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~tg~~--~vp~~~~~~~~~v~i~~ 770 (794) ....+-|+ ...++...++.- ..-++. +.+.+...++.. ..+.+.-..+..+ ...++|..+..+++|.+ T Consensus 680 -~n~sSclm--~~sw~ws~s~~t----~k~~~~~eaYk~~~~~~p~--~~~~~~yp~~~VV~TKsriRG~Gr~~~~rf~s 750 (771) T protein:vir:95 680 -TNQSSCMV--QSQWSWTNSPAS----NKWGRTWQAYRFRRHFFPD--NIDNQFDDGNSVVETKSRLRGSGKVLSLYITT 750 (771) T ss_pred -cCCcceEE--EEEeeeecCCCC----CccccchheeeecceeccC--CcchhcCCccceeeeeheeeecceEEEEEEEe Confidence 11111111 122222222110 001111 122222222111 1111111111122 23578999999999999 Q ss_pred CCcCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 771 DETTPLNIIGCGWEGNYLRRS 791 (794) Q Consensus 771 ~~p~P~tvlai~~eg~y~~r~ 791 (794) ...-.++|++.+.--..|-.- T Consensus 751 ~~gKdlhl~Gysil~~~~~~~ 771 (771) T protein:vir:95 751 EPKKNLHIYGWSMLVDVNGTV 771 (771) T ss_pred cCCcceEEEeEEEEEeecCcC Confidence 999999999999877776655 No 33 >protein:vir:108312 Length: 458 # NCBI annotation: hypothetical protein # Family: family:all:1540 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552278;genbank:gi:160700603;genbank:GeneID:5758828 Probab=88.53 E-value=0.032 Score=28.80 Aligned_cols=440 Identities=10% Similarity=0.046 Sum_probs=169.3 Q ss_pred cceEeecCCcCCceeEEEecCceEEEEEeecccCCcccccccchhhhhhhhhhhcccccceeE-EECCceEEEEECCCCc Q lcl|Aclame:pro 151 DGLINVRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSDWTV-NVGQGFIHVTAPSGQQ 229 (794) Q Consensus 151 ~~~~~v~~g~y~~~y~vti~~~~~~t~tt~~~s~~~~~~~s~~~~ia~~l~~~~~~~~~~~tv-~~~~~~~~v~~~~~~~ 229 (794) ++...|+.++|...--+ .+..-..-. .|...... ..+..-+-.-.+............. ...+..++ +..+.. T Consensus 1 m~~~~ip~gsy~a~~~~-~daq~~VN~-yp~~~e~g--~ss~~l~~tPGl~~f~~~~~~~~~g~~~~~g~ly--~v~g~~ 74 (458) T protein:vir:10 1 MVQRQIPLVATTAEGDV-SGQEILVNV-YPRKSDGG--KYPFTLRHTPGLAFFCELPTFPVMAMHQNGSRAF--AVTPRD 74 (458) T ss_pred Cceeeeceeeeeccccc-ccceeeeee-eeeccccc--ccccceEecCCceeeecCCCCceeeEEecCCEEE--EeeCce Confidence 44445555444221100 000000000 00000000 0000000000000000000000000 00001001 001111 Q ss_pred cceeEeecccCcceeeeEEEEeeeeeeeccccCCCeEEEEEcCCCCCcceEEEEEeccCceEEEeec---ccceeeEecC Q lcl|Aclame:pro 230 IDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLG---WNTEDQVLWE 306 (794) Q Consensus 230 ~~~~~~~dg~~~t~~~~~~~~v~~~~~l~~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~w~e~~~---~~~~~~~~~~ 306 (794) ..- | ..+++.+|.+. .|...-.++. T Consensus 75 LY~-------------------------------------------------V---~~~~~~~~iG~i~gsg~VsMa~ng 102 (458) T protein:vir:10 75 MYE-------------------------------------------------I---SKDGTYKRLGSVDFKGRVVMEDNG 102 (458) T ss_pred EEE-------------------------------------------------E---eCCceEEEEecccCceeEEEeeCC Confidence 000 0 11111111111 0111111111 Q ss_pred cceEEEEEecCCceEEeeccccccccCCc-ccccCchhcCCCceEEEEEccceeeec--CCeEEEEccCCcccccccccc Q lcl|Aclame:pro 307 TMPHALVRAADGNFDFKWLEWSPKSCGDV-DTNPWPSFVGSSINDVFFFRNRLGFLS--GENIILSRTAKYFNFYPASIA 383 (794) Q Consensus 307 t~p~~lv~~~~~t~~~~~~~w~~r~~gd~-~s~p~psf~g~~p~~v~f~q~RL~~~~--~~~v~~S~~gd~~nF~~~s~~ 383 (794) + ..++.....-+... .+++. ..+..+.| ..+..|.|..+|++|.. ...++.|..+| . T Consensus 103 ~--q~vi~~G~~gY~yd-------~at~~~~~i~d~~~--~~~~~v~~~dGy~V~~~~g~~~~~is~L~d------~--- 162 (458) T protein:vir:10 103 K--QIVMVDGEKGYYYD-------SETEIVQEIKAEGF--YPASTVTYQDGYFIFDRKGTGQFFISELLD------V--- 162 (458) T ss_pred c--EEEEEECCeEEEEe-------ecccEEEeccCccc--cCcceEEEeCcEEEEEeeCCCEEEEEecCc------c--- Confidence 1 00000000000000 00000 00111222 34789999999999874 45677775444 1 Q ss_pred cCCCCCcEEEEEcCCcceeeeeeecCCCcEEEEecCcE--EEEeCCCcccccceEEEEeeeecccCCCCcEEeCCeEEEE Q lcl|Aclame:pro 384 NLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQ--FVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFA 461 (794) Q Consensus 384 ~~~d~D~i~~~~~s~~~~~i~~~v~~~~~L~l~t~~~q--~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv 461 (794) --||+++.-+..+++.|.-++...+.|++|.+..- |..+|...+.=.......+ .++|++.=.=..+|++++|+ T Consensus 163 ---s~d~l~fa~Ae~~pD~iv~i~~~~~~i~~fG~~TiEvw~ntG~a~fpy~r~~ga~i-~~Gcaa~~sv~~~~~t~~~l 238 (458) T protein:vir:10 163 ---AFDPLDFATAEGQPDPLLAVLSDHREVFMFGQETIEVWYNSGAADFPFERNQGAFI-EKGIGAPYSVAKTNNTVYFI 238 (458) T ss_pred ---eeCcceeeeecCCCCceEEEEeeccEEEEEeccceEEEEecCCCCcceeeccccee-eecccCcchhhhhCceEEEE Confidence 15799998899999999999999999999977765 7878763222111111111 35788777778999999999 Q ss_pred ecCCCeEEEEEEeeeeccccceehhHHHHHH-HHhcCCCcEEEEEcCCCCeEEEEEEc-CCCeEEEEEeEecCCceeEEe Q lcl|Aclame:pro 462 SPRSSFTSIHRYYAVQDVSSVKNAEDITSHV-PNYIPNGVFSICGSGTENFCSVLSHG-DPSKIFMYKFLYLNEELRQQS 539 (794) Q Consensus 462 ~~~g~~~~~~~~~~~~~~~~~~~~~dls~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~-~~g~l~~~~y~~~~~e~~v~a 539 (794) ...+ .++.. +.|+.+-||-|. .+.| .++. ..-.+.++-. +...+|+++| +... T Consensus 239 ~~d~---~Vy~l-------~g~~~~rIST~aIE~~i-------~sy~-~~da~a~t~~~eGH~fy~Ltf----P~a~--- 293 (458) T protein:vir:10 239 GSDL---MIYQI-------TGYTPVRISTHAVEQTL-------KGVN-LSDAFAYTYQSEGHLFYVLTI----PGKN--- 293 (458) T ss_pred cCCe---EEEEe-------cCceeEEeeCHHHHHHH-------hcCC-hhheEEEEEEecCeEEEEEEC----CCCC--- Confidence 8865 33332 235555555443 2223 2222 2223333333 3444666666 2211 Q ss_pred EEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeeccccCCCCccceeeeeeeEEeecCcceeccceeeEEEcc Q lcl|Aclame:pro 540 WSHWDFGENVQVLACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIP 619 (794) Q Consensus 540 W~~w~~~g~~~~~~~~~~~d~ly~vv~r~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~t~~~~~ 619 (794) | -|-++..- .+|-+-+- +..+ .....|...+.+ T Consensus 294 ~-Tw~yD~~t----------~~Wher~S---g~~~----------------~~Ra~~~v~~~g----------------- 326 (458) T protein:vir:10 294 L-TWCYDISS----------GSWHVRQS---YQFD----------------RHVSNNSIYFDQ----------------- 326 (458) T ss_pred c-eeEEeccc----------ccceeecc---CCCC----------------ceEEEEEEEeCC----------------- Confidence 1 22233211 12222110 0000 112222221110 Q ss_pred cccCCcccceEEEEEecCCceecceeeeccccccceEEEcccccCCeEEEEeeeeEEEecCceeEeccCCccceeeeeec Q lcl|Aclame:pro 620 TIYGANFGRGKITVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIG 699 (794) Q Consensus 620 ~~~g~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~g~~~~~~~~~~ 699 (794) ..+|....+|.+..+....- -| -|-+.+..+.++++ . +. .. T Consensus 327 ---------~~~vGD~~ng~ly~ld~~~~-----------td-------~g~~i~~~~~~p~~--~---~~-------~~ 367 (458) T protein:vir:10 327 ---------KTLVGDFQNGRIYIMADNYY-----------TD-------DGDPVVREFILPVV--N---NG-------RE 367 (458) T ss_pred ---------eEEEEEcCCCeEEEEcccCc-----------CC-------CCceeeeeeeccce--e---CC-------CC Confidence 11233334443322211000 00 13333444443332 1 11 11 Q ss_pred cEEEEEEEEEeeccceEEEEEccCCCcce-----eeecCceeccccc--ccCccccccceEEEEeccccceEEEEEEECC Q lcl|Aclame:pro 700 RLQLRRAWVNYENSGTFDIYVENQSSNWK-----YTMAGARLGSNTL--RAGRLNLGTGQYRFPVVGNAKFNTVYILSDE 772 (794) Q Consensus 700 r~~l~~~~~~~~~tg~~~~~v~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~ 772 (794) |++++.+.+.+.--=+.. .+++.++. -+..|...+.... +.|.+--......+--.|..++--++|+-.+ T Consensus 368 rl~~~~~el~~~tGvg~~---~~~~~~p~~~l~~S~d~g~~~s~~~~~~~lg~~gey~tr~~~~rlG~ar~rvf~v~~s~ 444 (458) T protein:vir:10 368 FLTVDSLELDLSSGVGLT---VGQGSDPELRVYFSKDNGNEYSQNFKVGKIGRKGEFLTRAKVNRFGCARQFTFKVEISD 444 (458) T ss_pred eEEEEEEEEEEecceeee---eCCCCCceEEEEEeeCCCcccchhHHHhhcCCcchhhhhhhhhhhccCcceEEEEEEec Confidence 455566655433210000 11111111 1111111111101 1233322222333333455566558999999 Q ss_pred cCCEEEEEEEEEEE Q lcl|Aclame:pro 773 TTPLNIIGCGWEGN 786 (794) Q Consensus 773 p~P~tvlai~~eg~ 786 (794) |.|.+|+++..+-+ T Consensus 445 p~~~~l~ga~~~~r 458 (458) T protein:vir:10 445 PIPVDIGGAWVEVR 458 (458) T ss_pred chhhcceeeeEEeC Confidence 99999999999988 Done!