Query lcl|Aclame:protein:vir:1543|NCBI_annot:tail tubular protein B|genbank:acc:NP_052111;swissprot:trembl:q9t105;genbank:gi:9634037;uniprot:Q9T105;genbank:GeneID:1262408 Match_columns 801 No_of_seqs 162 out of 259 Neff 8.3 Searched_HMMs 1612 Date Fri Nov 29 19:29:53 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_45 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_45_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:1543 Length: 801 # 100.0 4E-254 3E-257 1409.6 90.5 801 1-801 1-801 (801) 2 protein:vir:3366 Length: 801 # 100.0 6E-252 4E-255 1397.7 88.2 801 1-801 1-801 (801) 3 protein:vir:10452 Length: 794 100.0 1E-248 9E-252 1379.4 90.0 792 1-801 1-794 (794) 4 protein:vir:2203 Length: 794 # 100.0 4E-247 2E-250 1371.7 91.1 792 1-801 1-794 (794) 5 protein:vir:99677 Length: 794 100.0 1E-244 8E-248 1357.8 90.9 790 1-801 1-794 (794) 6 protein:vir:94583 Length: 792 100.0 5E-243 3E-246 1349.0 87.4 791 1-801 1-792 (792) 7 protein:vir:94713 Length: 785 100.0 2E-239 1E-242 1329.1 89.5 783 1-801 1-785 (785) 8 protein:vir:8887 Length: 808 # 100.0 1E-233 8E-237 1297.3 88.1 789 1-801 1-808 (808) 9 protein:vir:105647 Length: 800 100.0 2E-220 1E-223 1224.9 85.9 781 2-801 1-800 (800) 10 protein:vir:97014 Length: 800 100.0 3E-220 2E-223 1224.4 86.1 771 2-801 1-800 (800) 11 protein:vir:7021 Length: 803 # 100.0 5E-220 3E-223 1223.0 84.3 778 2-801 1-803 (803) 12 protein:vir:103341 Length: 806 100.0 1E-216 8E-220 1204.3 84.9 775 2-801 1-806 (806) 13 protein:vir:80253 Length: 777 100.0 2E-214 1E-217 1192.3 82.7 768 1-801 1-777 (777) 14 protein:vir:6326 Length: 826 # 100.0 4E-214 2E-217 1190.6 82.6 776 1-801 1-826 (826) 15 protein:vir:78957 Length: 826 100.0 5E-211 3E-214 1173.6 83.5 779 1-801 1-826 (826) 16 protein:vir:100022 Length: 976 100.0 2E-209 2E-212 1164.2 85.9 772 1-801 1-976 (976) 17 protein:vir:78703 Length: 905 100.0 4E-206 3E-209 1146.5 80.6 767 1-801 1-905 (905) 18 protein:vir:103790 Length: 768 100.0 7E-172 4E-175 959.0 73.7 734 1-798 1-768 (768) 19 protein:vir:95324 Length: 823 100.0 6E-160 3E-163 893.7 69.8 719 1-797 1-823 (823) 20 protein:vir:1778 Length: 680 # 100.0 1E-160 8E-164 897.2 57.4 538 1-557 1-680 (680) 21 protein:vir:98487 Length: 681 100.0 4E-157 3E-160 877.9 69.9 662 1-796 1-681 (681) 22 protein:vir:107802 Length: 681 100.0 4E-157 3E-160 877.9 69.9 662 1-796 1-681 (681) 23 protein:vir:107423 Length: 681 100.0 4E-157 3E-160 877.9 69.9 662 1-796 1-681 (681) 24 protein:vir:7329 Length: 825 # 100.0 2E-155 1E-158 868.6 68.1 714 1-797 1-825 (825) 25 protein:vir:102644 Length: 594 100.0 6E-135 4E-138 756.3 58.6 560 1-797 1-594 (594) 26 protein:vir:80177 Length: 1027 99.6 4.9E-14 3.1E-17 93.5 28.9 745 1-801 1-936 (1027) 27 protein:vir:94602 Length: 1012 99.6 1.3E-12 7.9E-16 85.8 36.4 771 1-800 1-1012(1012) 28 protein:vir:2625 Length: 715 # 98.9 2.5E-08 1.5E-11 62.3 45.8 632 1-798 1-715 (715) 29 protein:vir:8837 Length: 513 # 98.5 5E-07 3.1E-10 55.1 38.8 483 1-800 1-513 (513) 30 protein:vir:3133 Length: 911 # 98.1 5.8E-06 3.6E-09 49.3 33.8 661 1-801 1-839 (911) 31 protein:vir:95475 Length: 771 97.6 4.1E-05 2.6E-08 44.6 42.4 655 1-798 1-771 (771) 32 protein:vir:177 Length: 472 # 94.8 0.0036 2.2E-06 34.0 34.2 443 198-793 1-472 (472) 33 protein:vir:105428 Length: 472 94.0 0.0058 3.6E-06 32.9 29.6 419 198-718 1-472 (472) 34 protein:vir:105563 Length: 396 93.8 0.0062 3.9E-06 32.7 21.1 376 1-537 1-396 (396) 35 protein:vir:7329 Length: 825 # 92.9 0.0094 5.8E-06 31.7 32.8 613 64-801 1-743 (825) 36 protein:vir:108312 Length: 458 92.7 0.01 6.5E-06 31.4 32.6 415 198-793 1-458 (458) 37 protein:vir:95324 Length: 823 74.0 0.16 0.0001 24.9 34.9 654 64-801 1-741 (823) 38 protein:vir:2109 Length: 472 # 44.7 0.8 0.00049 21.1 34.8 425 198-718 1-472 (472) 39 protein:vir:93631 Length: 580 42.9 0.87 0.00054 20.9 30.6 507 86-730 1-580 (580) 40 protein:vir:3529 Length: 477 # 29.5 1.7 0.001 19.4 33.4 428 209-718 1-477 (477) 41 protein:vir:105525 Length: 472 27.2 1.9 0.0012 19.1 34.6 424 198-716 1-472 (472) 42 protein:vir:9268 Length: 472 # 23.8 2.3 0.0014 18.6 32.9 426 172-718 1-472 (472) No 1 >protein:vir:1543 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052111;swissprot:trembl:q9t105;genbank:gi:9634037;uniprot:Q9T105;genbank:GeneID:1262408 Probab=100.00 E-value=4.4e-254 Score=1409.57 Aligned_cols=801 Identities=100% Similarity=1.504 Sum_probs=782.5 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||+++++++....++++|+|+|+++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GvSqq~d~~r~~~q~~~~~N~~~~~~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~e~y~l~ 80 (801) T protein:vir:15 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) T ss_pred CceeeeecchhhcceecCcchHhhhhhHhhhhcceeccccCcccCCchheeeeecCCCCcccceeEEEEEeCCceEEEEE Confidence 99999999999999999999999999999999999999999999999999999998888888999999999999999999 Q ss_pred EeCCeEEEEeCCCeEEEEecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCCCcc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) |++++||||+++|.+++|++..+|+.++++.++|+++|+||+|||+|++++|+++.++.+...++...++++++++++|+ T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~y~~~~~~~~~l~~~~~aD~~fi~nr~~~~~~~~~~~~~~~~~~~~~alv~v~~~~yg 160 (801) T protein:vir:15 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) T ss_pred EcCCeEEEEccCCcEEEEecCCccccccCchhheeEEEEcCEEEEeeCCeeeecccCccccCccCCCCceEEEeeeccCc Confidence 99999999999999999999999999999999999999999999999999999999988888788888999999999999 Q ss_pred ceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCceeEEE Q lcl|Aclame:pro 161 RRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGL 240 (801) Q Consensus 161 ~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t~ 240 (801) ++|+|+++++..+.+++|+++.+....+++.+++++.|..++.+..+....+...+.|.+...++.+++.++++.+.+++ T Consensus 161 ~t~~I~i~gs~~~~~t~~~gs~~~~~~~~s~~~ia~~l~~~~~~~~p~~~~~~~~~~w~~~~~~g~~~i~a~~~~~~~~~ 240 (801) T protein:vir:15 161 RRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGL 240 (801) T ss_pred eeEEEEeCCcceEEEEeccCcccchhhhcceeechHHHhhhhhhccCccceeccCccEEEEecCcEEEEeCCCCccccee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEEE Q lcl|Aclame:pro 241 QTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALV 320 (801) Q Consensus 241 t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv 320 (801) +++++.+++++.++++.++++++||..|++|++|+|.++.+++.++|||+++...++|+||+++|..++++.++|||.|+ T Consensus 241 ~t~dg~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~E~a~~g~~~~~~~~tmp~~lv 320 (801) T protein:vir:15 241 QTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALV 320 (801) T ss_pred eeccccCceeeeEEeecccceeeeeeecCCCcEEEEEecCCCccceEEEEEEcCCeeEEeecccccceeeeccccceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCccEEE Q lcl|Aclame:pro 321 RASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDV 400 (801) Q Consensus 321 ~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~~ 400 (801) +.++++|+++.++|++|.+||+++||.|||+|++|++|+||||||+|++|++|||||+||||||+++|++++.|||||++ T Consensus 321 ~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i~~ 400 (801) T protein:vir:15 321 RASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDV 400 (801) T ss_pred eeccceEEEeccccccccCCccccCCcccccCCCceEEEEEcceEEEeeCCeEEEEecCCccccccccccCCCCCccEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEEE Q lcl|Aclame:pro 401 AVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRY 480 (801) Q Consensus 401 ~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~ 480 (801) ++++++++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|++++|+|++|+|++++|| T Consensus 401 ~~~~~~~~~i~~~v~~~~~L~i~t~~~q~~ls~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~r~ 480 (801) T protein:vir:15 401 AVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRY 480 (801) T ss_pred EecCCcceeeEEEeecCCcEEEEecCcEEEEcCCCcccceeEEEEEEEeeeccCCCCceEeCCeEEEEecCCCeeEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeEEEE Q lcl|Aclame:pro 481 YAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFA 560 (801) Q Consensus 481 ~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~~~~ 560 (801) +++++.+|+|++.|||+|++|||++++.+++++++++.+++|+++++|+|++|+|||+++||+|+|||||+|+|.++++| T Consensus 481 ~~~~~~~d~y~a~Dlt~~~~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g~~~~~~ 560 (801) T protein:vir:15 481 YAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFA 560 (801) T ss_pred EeecccccceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEecCCCceEEEeeEEEEcCCCEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccccceEEE Q lcl|Aclame:pro 561 AQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSV 640 (801) Q Consensus 561 ~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~ 640 (801) +...+|+||++|+|+++.+++||.+.+++.+.+...+.+||||+.++++++.++++++..++++++.++|++|++|+++. T Consensus 561 ~~~~~d~l~~~v~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~ 640 (801) T protein:vir:15 561 AQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSV 640 (801) T ss_pred EEecCCEEEEEEEecCcEEEEEEEEccccccCCCcceeeeeeeeeeEeeccceeccCceecccccccccccccccceEEE Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEeecc Q lcl|Aclame:pro 641 VFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDS 720 (801) Q Consensus 641 ~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~t 720 (801) +++||.+.+..++.+|+...++++|++++++++|+|||+|+++++++||+++.++++|+.+.+.++|+||||++|++.+| T Consensus 641 v~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~~~~~~~~~~rl~l~r~~~~~~~t 720 (801) T protein:vir:15 641 VFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDS 720 (801) T ss_pred EEeCCceeeeeeecCcccCcceEEEcCCCCCcEEEEeeeeeEEEEecceEEeccCCCCCceeeeeccEEEEEEEEEeccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEeccccC Q lcl|Aclame:pro 721 GAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRSSG 800 (801) Q Consensus 721 g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~rr 800 (801) |.|.+.|++.+|+..+...+.+++.+.+..+.|++++|.++||+.+|+++.+|+|++++|+||+|+||+|||+||+|+|| T Consensus 721 g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvlsi~~e~~y~~r~~~ 800 (801) T protein:vir:15 721 GAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRSSG 800 (801) T ss_pred cceEEEECCcccccceeecCcccccccccccccccccceEEEEEeecCceEEEEEEECCCCcEEEEEEEEEEEEeccccC Confidence 99999999999998899999999999999999999999999999999999999999999999999999999999999999 Q ss_pred C Q lcl|Aclame:pro 801 I 801 (801) Q Consensus 801 ~ 801 (801) | T Consensus 801 ~ 801 (801) T protein:vir:15 801 I 801 (801) T ss_pred C Confidence 9 No 2 >protein:vir:3366 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523337;swissprot:trembl:q8w5u3;genbank:gi:17570828;goa:Q8W5U3;uniprot:Q8W5U3;genbank:GeneID:927453 Probab=100.00 E-value=6.3e-252 Score=1397.74 Aligned_cols=801 Identities=97% Similarity=1.475 Sum_probs=780.4 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++.++..+.++++|+++|+++|+|+|+ T Consensus 1 M~~i~~~~~nl~~GvSqq~d~~r~~~q~~~~~N~~~~~~gG~~rRpGt~~va~~~~~~~~~~~~~~~~~~r~~~~~y~l~ 80 (801) T protein:vir:33 1 MALISQSIKNLKGGISQQPDILRFTEQGSVQINGWSSESEGIQKRPPMIHLKTLGTAGYVGAQPYVHLINRDEFEQYFVV 80 (801) T ss_pred CceeEeeccceecceeccchhHhhhhhHhhhhcceeecccCcccCchhHhhhhhcCCCccccceEEEEEEeCCceEEEEE Confidence 99999999999999999999999999999999999999999999999999999998888889999999999999999999 Q ss_pred EeCCeEEEEeCCCeEEEEecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCCCcc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) |++++||||+++|.+++|++..+|+.++++.++|+++|+||+|||+|++++|++..++.+...+++.++++++++.++|+ T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~y~~~~~~~~~l~~~t~aD~~fi~nr~~~p~~~~~~~~~~~~~~~~~~li~v~~~~yg 160 (801) T protein:vir:33 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) T ss_pred EcCCeEEEEccCCcEEEEecCCcceeecCcchheEEEEEcCEEEEeeCCeeecccCCcccccccCCCcceEEEEeecccc Confidence 99999999999999999999999999999999999999999999999999999999887777788888999999999999 Q ss_pred ceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCceeEEE Q lcl|Aclame:pro 161 RRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGL 240 (801) Q Consensus 161 ~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t~ 240 (801) ++|+|+++++..+.+++++++....+.+++.+++++.|..++.+..+....+...++|.+...++.+++.++++...+++ T Consensus 161 ~t~~I~i~gs~~~~~~~~~gs~~~~v~~~s~~~~A~~l~~~~~~~~~~~~~~~~~~~w~~~~~~g~~~i~~p~~~~~~~i 240 (801) T protein:vir:33 161 RRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGL 240 (801) T ss_pred eEEEEEECCcceEEEEeeccccccccccccchhhhhhhhhhhhccCccceeeecCceEEEEecCeEEEEecCCCcccccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999 Q ss_pred EeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEEE Q lcl|Aclame:pro 241 QTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALV 320 (801) Q Consensus 241 t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv 320 (801) ++.++.+++++.++++.++++++||..|++|++|+|.++.+.+.++|||+|+..+++|+||++||...+++.++|||.|+ T Consensus 241 tt~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~g~~~~~~~~tmp~~l~ 320 (801) T protein:vir:33 241 QTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALV 320 (801) T ss_pred cccCCccceeEEEEeecccceeeeeeecCCCcEEEEEecCCCcccceEEEEEcCCcEEEEeeccccceeeeecccceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCccEEE Q lcl|Aclame:pro 321 RASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDV 400 (801) Q Consensus 321 ~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~~ 400 (801) +.++++|+++.++|++|.+||+++||.|||+|++|++|+||||||+|++|++|||||+||||||+++|++++.|||||++ T Consensus 321 ~~~~~tf~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i~~ 400 (801) T protein:vir:33 321 RASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDV 400 (801) T ss_pred EccCceEEecccCccccccCCccccCcccccCCCceEEEEEcceEEEeeCCeEEEEecCCccccccccccCCCCCccEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEEE Q lcl|Aclame:pro 401 AVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRY 480 (801) Q Consensus 401 ~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~ 480 (801) ++++++++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|++++|+|++|+|++++|| T Consensus 401 ~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~r~ 480 (801) T protein:vir:33 401 AVSHDRVSTLKYAVPFSEELLLWSDQAQFVLTASDILSSRSVGLNLTTQFDVQDRARPHGVGRNVYFSSPRASFTSINRY 480 (801) T ss_pred EecCCcceeeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeecccCCCCceEecCeEEEEecCCCeeEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeEEEE Q lcl|Aclame:pro 481 YAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFA 560 (801) Q Consensus 481 ~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~~~~ 560 (801) +++++.+|+|++.|||+|++|||++++++++++++++++++|+++++++|++|+|||+++||+|+|||||+|+|+++++| T Consensus 481 ~~~~~~~d~y~~~Dlt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g~~~~~~ 560 (801) T protein:vir:33 481 YAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFVAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFA 560 (801) T ss_pred EeecccccceehhhHHHHHHHhcCCceEEEEEcCCCCeEEEEEecCCCEEEEEEEecCCCceEEEeeEEEEcCCCEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccccceEEE Q lcl|Aclame:pro 561 AQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSV 640 (801) Q Consensus 561 ~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~ 640 (801) +.+.+|+||++|+|+++.+++||.+..+..+....++.+||||+.++++++.+|+.++..+.+.++.++|+.|+||+++. T Consensus 561 ~~~~~d~l~~vv~r~~~~~le~~~~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~gl~~~eg~~v~ 640 (801) T protein:vir:33 561 AQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTKGRVSV 640 (801) T ss_pred EecCCCEEEEEEEcCCcEEEEEEEEeeccccCCCccceEEeecceEEEecccceecCccccccccccccCCccccceEEE Confidence 99999999999999999999999988888888889999999999999999999999999999999999999999999999 Q ss_pred EecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEeecc Q lcl|Aclame:pro 641 VFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDS 720 (801) Q Consensus 641 ~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~t 720 (801) +++||.++....+..++....++++++++++++|+|||+|+++++++||+++.++++|+.+.+.++|+||||++|++++| T Consensus 641 ~~~dG~v~~~~~~~~~~~~~~~l~i~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~~~~~~~t 720 (801) T protein:vir:33 641 VFPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDS 720 (801) T ss_pred EEeCCceEeeeeccccccCceeEEecCCCCCCEEEEeeeeeEEEEeCceEEeccCCCCceeeeeeccEEEEEEEEEeecC Confidence 99999999888888888899999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEeccccC Q lcl|Aclame:pro 721 GAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRSSG 800 (801) Q Consensus 721 g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~rr 800 (801) |+|.+.|++.+|+..+.+.+++++...+..+.|++++|.+++||.+|+++.+|+|++++|+||+|+||+|||+||+|+|| T Consensus 721 g~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvl~i~~eg~y~~r~~~ 800 (801) T protein:vir:33 721 GAFIIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNTVTIESDASTPLNIIGCGWEGNYLRRSSG 800 (801) T ss_pred cceEEEECCcccceeeeecccccccccccccccccccceEEEEeeccCceEEEEEEeCCCCCEEEEEEEEEEEEeccccC Confidence 99999999999998899999999999999999999999999999999999999999999999999999999999999999 Q ss_pred C Q lcl|Aclame:pro 801 I 801 (801) Q Consensus 801 ~ 801 (801) | T Consensus 801 ~ 801 (801) T protein:vir:33 801 I 801 (801) T ss_pred C Confidence 9 No 3 >protein:vir:10452 Length: 794 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848299;genbank:gi:30387490;genbank:GeneID:1733952 Probab=100.00 E-value=1.4e-248 Score=1379.40 Aligned_cols=792 Identities=69% Similarity=1.161 Sum_probs=761.2 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||+++++++.....+++++++||+.|+|+|+ T Consensus 1 M~~i~~s~~n~~~GvSqq~D~~Ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~rd~~e~~~v~ 80 (794) T protein:vir:10 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTLGDNGALGQAPYIHLINRDENEQYYAV 80 (794) T ss_pred CcceeeecchhhcccccCCchHHhhhhHhhhhcceeeeccCcccCcchhhheeccCCCccccceeeeEEecCCCceEEEE Confidence 99999999999999999999999999999999999999999999999999999998877777788999999999999999 Q ss_pred EeCCeEEEEeCCCeEEEEe--cCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCCC Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVR--GDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQ 158 (801) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~--~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~ 158 (801) |++++||||+++|.+++|. +..+|+.+++++++|+++|+||+|||+|++++|++..++.+...+++..++++++++++ T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~~~Y~~aa~~~~~l~~~q~aD~~fivn~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~ 160 (794) T protein:vir:10 81 FTGTGIRVFDLAGNEKQVRYPNGSNYIKTANPRSDLRMVTVADYTFIVNRNVVVQKDPNSVNLANYNPKQDGLINIRGGQ 160 (794) T ss_pred EeCCeEEEEEcCCcEEEEEcCCCCcceecCCCcceEEEEEEcCEEEEEcCCeeeeeeccccccCCCCCCccEEEEecccc Confidence 9999999999999887764 67789888999999999999999999999999999999888777888899999999999 Q ss_pred ccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCceeE Q lcl|Aclame:pro 159 YGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVW 238 (801) Q Consensus 159 y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 238 (801) |+++|++++++...+++++|+++.+..+.+.+..+++..|..++.+. ..+|.+...++.+++.++++..++ T Consensus 161 y~r~y~i~i~~~~~at~~tpdgt~~~~~~~~s~~~ia~~L~~~l~a~---------~~g~t~~~~g~~i~i~a~s~~~~~ 231 (794) T protein:vir:10 161 YGRELIVHINGKDVATYKIPDGSKPEHVNNTDAQWLAERLAKQMRIN---------LSGWTVNVGQGFIHVTAPSGQQID 231 (794) T ss_pred cceEEEeccCCcceeEEEecCCCCcccceecchhhhhhhhhhhhhcc---------cCCceEEeCCeEEEEEeccCceec Confidence 99999999999999999999999999999999999999988776553 346788888999999999988889 Q ss_pred EEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEE Q lcl|Aclame:pro 239 GLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWA 318 (801) Q Consensus 239 t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~ 318 (801) ++++.++..++++.+..+.++++++||+.|++|++|+|.++.++..++||++|+...++|+||++++...+++.++|||. T Consensus 232 t~s~~~~~~~~~~~~v~~~~~~~~~lp~~~~~G~~v~i~~~~~~~~~~yyv~~~~~~~~w~E~~~~g~~~~~~~~tmP~~ 311 (794) T protein:vir:10 232 SFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTENQVLLETMPHA 311 (794) T ss_pred cccccCCcCcceeEEEEeccCcceecccCCCCCcEEEEEeCCCCCcceeEEEEEcCCcEEEEecccceeEEEecccceeE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCccE Q lcl|Aclame:pro 319 LVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPI 398 (801) Q Consensus 319 lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~i 398 (801) |+++++++|+++.++|++|.+||+++||.|||+|++|++|+||||||+|++|++|||||+||||||+++|++++.||||| T Consensus 312 l~r~~~~t~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~I 391 (794) T protein:vir:10 312 LVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSNDDPI 391 (794) T ss_pred EEEeccceEEeeecccccccccccccCccCcccCCCccEEEEEcceEEEeeCCeEEEEecCCcccccccccccCCCCccE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEE Q lcl|Aclame:pro 399 DVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSIN 478 (801) Q Consensus 399 ~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~ 478 (801) ++++++++++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.|+|+.+|++++|+|++|+|++++ T Consensus 392 ~~~~ss~~~~~i~~~v~~~~~L~i~T~~~q~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~ 471 (794) T protein:vir:10 392 DVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSRSVELNLTTQFDVQDRARPYGIGRNVYFASPRSSYTSIH 471 (794) T ss_pred EEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCeeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeEE Q lcl|Aclame:pro 479 RYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTV 558 (801) Q Consensus 479 ~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~~ 558 (801) ||+++++.+|+|++.|||+|++|||++++..++++++++.+++|+++++|+|++|+|||+++||+|+|||||+|+|.+++ T Consensus 472 r~~~~~~~~d~y~a~Dlt~~~~hl~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g~~~~ 551 (794) T protein:vir:10 472 RYYAVQDVSSVKNSEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQV 551 (794) T ss_pred EEeeeccccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeEEEEEcCCcEEE Confidence 99988999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccccceE Q lcl|Aclame:pro 559 FAAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRV 638 (801) Q Consensus 559 ~~~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~ 638 (801) +|+...+|+||++|+|+++++++||.|++++.+..++++.+||||++++++.+++|++.++.+.+.++.++|+.|+||++ T Consensus 552 ~~~~~~~d~l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~g~~~~eg~~ 631 (794) T protein:vir:10 552 LACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKI 631 (794) T ss_pred EEEEecCCeEEEEEEeCCCEEEEEEEEeecCCCCCCccceeeeecceEEEecCcccccccccceEEcccccCcccccccE Confidence 99988899999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEee Q lcl|Aclame:pro 639 SVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYE 718 (801) Q Consensus 639 v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~ 718 (801) +.+.+||.......+..++.+.++++|++++++++|+|||+|+++++++||+++.+++++..+....+|+||||+++++. T Consensus 632 v~~~adg~~~~~~~~~~~~~g~~~l~i~~~~~a~~v~vGl~y~s~~~~~~~~i~~~~~~~~~~~~~~gr~~l~r~~~~~~ 711 (794) T protein:vir:10 632 TVLEPDGKITVFEQPTSGWQSDPWLRLSGNLEGREVFIGFNINFVYEFSKFLIKQTTDDGSTSTEDIGRLQLRRAWVNYE 711 (794) T ss_pred EEEecCCceeeeeeeeeeeecceEEEecCCCCCceEEEeeeeeEEEEecceEEEccCCCcceeeeccccEEEEEEEEEee Confidence 99999999888888888888889999999999999999999999999999999999888888888999999999999999 Q ss_pred ccccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 719 DSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) Q Consensus 719 ~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~ 798 (801) +||+|.++|++.+++..+.+.+.+++...+..+.+++.+|+++|||.+|+++.+|+|+|++|+||+|+||+|||+||+|+ T Consensus 712 ~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvlsi~~eg~y~~r~ 791 (794) T protein:vir:10 712 DSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRS 791 (794) T ss_pred ccccEEEEEcCCccccceeeccceeccccccccccccccceEEEEecccCceEEEEEEECCCCceEEEEEEEEEEEeccc Confidence 99999999999988877889999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCC Q lcl|Aclame:pro 799 SGI 801 (801) Q Consensus 799 rr~ 801 (801) ||| T Consensus 792 ~~v 794 (794) T protein:vir:10 792 SGI 794 (794) T ss_pred cCC Confidence 999 No 4 >protein:vir:2203 Length: 794 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_042000;swissprot:sw:p03747;genbank:gi:9627472;uniprot:P03747;genbank:GeneID:1261024 Probab=100.00 E-value=3.6e-247 Score=1371.66 Aligned_cols=792 Identities=69% Similarity=1.171 Sum_probs=763.1 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++++.......++++|+|+++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GvSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~~~y~l~ 80 (794) T protein:vir:22 1 MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLNTLGDNGALGQAPYIHLINRDEHEQYYAV 80 (794) T ss_pred CceeeeecchhhcccccCCchHHhhhHHhhhhcceeeccCCceeCCchHhhhhhcccCCCCCccEEEEEEeCCCcEEEEE Confidence 99999999999999999999999999999999999999999999999999999988776667789999999999999999 Q ss_pred EeCCeEEEEeCCCeEEEEe--cCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCCC Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVR--GDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQ 158 (801) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~--~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~ 158 (801) |++++||||+++|.++.|. +..+|+.++++..+|+++|+||+|||+|++++|+++.|+.+..|+++.+++++++++++ T Consensus 81 ~~~~~irv~~~~G~~~~v~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~~~~~~p~~~~~~~~~~~~~~~~~g~v~v~~g~ 160 (794) T protein:vir:22 81 FTGSGIRVFDLSGNEKQVRYPNGSNYIKTANPRNDLRMVTVADYTFIVNRNVVAQKNTKSVNLPNYNPNQDGLINVRGGQ 160 (794) T ss_pred EcCCeEEEEecCCcEEEeecCCCccceecCCCcccEEEEEEcCEEEEEcCCeeeeEeeccccCCCCCCCceEEEEccCCc Confidence 9999999999999888875 56678888889999999999999999999999999999999999999999999999999 Q ss_pred ccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCceeE Q lcl|Aclame:pro 159 YGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVW 238 (801) Q Consensus 159 y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 238 (801) |+++|+++|++...+++++|+++...++...+..+++..|..++.+ ...+|.+..+++.+++.+.++..++ T Consensus 161 y~~ty~v~I~~~~~a~~~~p~gt~~~~~~~~~~~~ia~~L~~~l~~---------~~~~~t~~~~~~~~~i~a~~~~~~~ 231 (794) T protein:vir:22 161 YGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRT---------NLSDWTVNVGQGFIHVTAPSGQQID 231 (794) T ss_pred cceeEEEEeccCcceEEEEcCCCccccceeechhhhhhhhhhhhee---------ccccceEEeCCceEEEEEcCCceEE Confidence 9999999999999999999999999999999999999999877654 2346778888888999999999999 Q ss_pred EEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEE Q lcl|Aclame:pro 239 GLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWA 318 (801) Q Consensus 239 t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~ 318 (801) .+++.++.+++++.+..+.++++++||+.|++|++++|.++.++..++||++|+..++.|+||++|+...+++.+||||. T Consensus 232 ~~t~~~g~~~t~~~~~~~~~~~~~~lp~~~~~G~~v~i~~~~~~~~~~Y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p~~ 311 (794) T protein:vir:22 232 SFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHA 311 (794) T ss_pred EEeeecccCcceeEEEEeccccceeccccCCCCeEEEEEeCCCCCcceeEEEEeccceEEEEeeeccceeeecccceeeE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCccE Q lcl|Aclame:pro 319 LVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPI 398 (801) Q Consensus 319 lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~i 398 (801) ++++++++|+++.++|++|.+||+++||.|||+|++|++|+||||||+|++|++|||||+||||||++++++++.||||| T Consensus 312 lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i 391 (794) T protein:vir:22 312 LVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPI 391 (794) T ss_pred eeeccCCcEEEeeccccccccCccccCCcceecCCCcceEEEEcceEEEecCCeEEEEccCCccccccccCcCCCCCccE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEE Q lcl|Aclame:pro 399 DVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSIN 478 (801) Q Consensus 399 ~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~ 478 (801) ++++++++++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|++++|+|++|+|++++ T Consensus 392 ~~~~ss~~~~~i~~~v~~~~~L~i~t~~~e~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~ 471 (794) T protein:vir:22 392 DVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIH 471 (794) T ss_pred EEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEeeccCCCCceEeCCeEEEEecCCCeeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeEE Q lcl|Aclame:pro 479 RYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTV 558 (801) Q Consensus 479 ~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~~ 558 (801) ||+++++.+|+|++.|||+|++|||+|++..++++++++.+++|+++++|+|++|+|||+++||+|+|||||+|+|.+++ T Consensus 472 r~~~~~~~~d~y~~~Dlt~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~~v~aW~~~~~~g~~~~ 551 (794) T protein:vir:22 472 RYYAVQDVSSVKNAEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQV 551 (794) T ss_pred EeEeeecccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceeEEeeEEEEcCCCEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccccceE Q lcl|Aclame:pro 559 FAAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRV 638 (801) Q Consensus 559 ~~~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~ 638 (801) +|+...+|+||++|+|+++++++||.|++++.+.+++.+.+||||+.++...+++++..++.+.+.++..+|+.|++|++ T Consensus 552 ~~~~~~~d~l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~g~~~~~~~~t~~~~~~~~g~~~~~g~~ 631 (794) T protein:vir:22 552 LACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKI 631 (794) T ss_pred EEEEecCCEEEEEEEeCCCEEEEEEEEeeccccCCCccceeeeeeeEEEeeccceeecCCcceEEEcccccCcccccceE Confidence 99988999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEee Q lcl|Aclame:pro 639 SVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYE 718 (801) Q Consensus 639 v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~ 718 (801) +.+.+||.......+..++.+.++++|++++++++|+|||+|+++++++||+++.++++++.+.+..+|+||||++|+|. T Consensus 632 v~~~~dg~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~~~~~~~~~~~grl~l~r~~~~~~ 711 (794) T protein:vir:22 632 TVLEPDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYE 711 (794) T ss_pred EEEEcCCceeeceeeeeeeeccceEEeCCCCCCcEEEEeeeeeEEEEecceEEEecCCCccceeeecceEEEEEEEEEec Confidence 99999999999999999988989999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 719 DSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) Q Consensus 719 ~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~ 798 (801) +||+|.++|++.+++..+.+.+.+++.+.+..+.+++.++.++|||.+|+++.+|+|+|+.|+||+|++|+|||+||+|+ T Consensus 712 ~tg~~~v~v~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~~~~~~~~~v~i~~d~p~P~tvlsi~~eg~y~~r~ 791 (794) T protein:vir:22 712 NSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRS 791 (794) T ss_pred cccceEEEEcCCCcccceeecCceecccccccCcccccCceEEEEecccCceEEEEEEECCCCCEEEEEEeEEEEEeccc Confidence 99999999999888877889999999999999999999999999999999999999999999999999999999999999 Q ss_pred cCC Q lcl|Aclame:pro 799 SGI 801 (801) Q Consensus 799 rr~ 801 (801) ||| T Consensus 792 ~~v 794 (794) T protein:vir:22 792 SGI 794 (794) T ss_pred cCC Confidence 999 No 5 >protein:vir:99677 Length: 794 # NCBI annotation: Tail tubular protein B # Family: family:all:825 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249591;genbank:gi:68299742;genbank:GeneID:3799992 Probab=100.00 E-value=1.2e-244 Score=1357.80 Aligned_cols=790 Identities=52% Similarity=0.901 Sum_probs=752.9 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++++..+..++++|+|+|+++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GvS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~f~~~~~~~y~l~ 80 (794) T protein:vir:99 1 MALISQSIKNLKGGISQQPDILRYSDQGSKQINGFSSEVEGLQKRPPSVHIKRLTDQFGLGQKPYCHIINRDEVERYAVF 80 (794) T ss_pred CceeeeecchhhcceecCCchHHhhhhHhhhhcceeeeccCcccCCccceeeeecCCCCCccccEEEEEEeCCCceEEEE Confidence 99999999999999999999999999999999999999999999999999999999888888899999999999999999 Q ss_pred EeCCeEEEEeC-CCeEEEEe--cCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCC Q lcl|Aclame:pro 81 FTGEDIKVFDL-DGKEYQVR--GDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGG 157 (801) Q Consensus 81 ~~~~~~rv~~~-~g~~~~v~--~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 157 (801) |++++||||++ +|.+++|. ...+|+++++++.+|+++|+||+|||+|+++||+++.+..+...+.+..+++++++++ T Consensus 81 f~~~~irv~~~~~g~~~~v~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~~~~v~~g 160 (794) T protein:vir:99 81 FTGSNIRVFDLFTGDEKTVNAPNGLSYVSSSNPRKDLRMVTVADYTFILNRNVATAQGTTNTPSGLAPFGHFGLVVIRGG 160 (794) T ss_pred EcCCeEEEEECCCCeEEEeeccccccccccCCccceeeEEEEccEEEEEcCCeeeeEeeeeccccCcCCCceEEEEeccC Confidence 99999999996 68888775 4577898999999999999999999999999999998777666777888999999999 Q ss_pred CccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCcee Q lcl|Aclame:pro 158 QYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNV 237 (801) Q Consensus 158 ~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 237 (801) +|+++|+|++++..+++++||+++......+.+..+++.++...+.. .+|.+...++.+++.++++..+ T Consensus 161 ~y~~~y~v~i~gs~ta~~~tp~~~~~~~~~~~s~~~ia~~l~~~l~~-----------~g~~v~~~~g~~~i~~~~~~~v 229 (794) T protein:vir:99 161 QYGRTYRIKVNGSVEASFETPLGDQVAHAKQIDIAYIIDQLAAGLIN-----------KGWAVTKGSGYFYFSKSGSVII 229 (794) T ss_pred CCCceEEEEecCCcccceeeccCcccccccccchhhhhhhhHhhhhc-----------ccceEEeCCeEEEEEecCCcee Confidence 99999999999999999999999999999999999999988765532 3577888889999999999989 Q ss_pred EEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceE Q lcl|Aclame:pro 238 WGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPW 317 (801) Q Consensus 238 ~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~ 317 (801) ++++++++.+++.+...++.++++++||+.|++|++|+|.++.+.+.++||++|+.+.++|+||++++...+++.+|||+ T Consensus 230 ~t~s~~~g~~~t~~~~~~~~v~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p~ 309 (794) T protein:vir:99 230 NSLEVEDGYNGQLAWGIINDVQKTTQLPVYAPNNYIIRVSGDPTLNQDDYYVRFDASRNVWTECPAPNIKADYNKATMPH 309 (794) T ss_pred EEEEeecCCCCceeeEEeeeccceeecccCCCCCeEEEEeccCCCCCCceEEEEEcCCceEEeeccceeecceeccceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCcc Q lcl|Aclame:pro 318 ALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDP 397 (801) Q Consensus 318 ~lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~ 397 (801) .++++++++|+++..+|++|.+||+++||.|||+|++|++|+||||||+|+++++|||||+||||||+++|+.++.|||| T Consensus 310 ~~v~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~is~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~ 389 (794) T protein:vir:99 310 VLIREADGTFTFKQADWTHRAAGDDETNPYPSFIGNSINDIFFFRNRLGFLSGENVILSGSGNYFNFFPESVAVLTDTDP 389 (794) T ss_pred EEeccCCCceeEeeccccccccCCcccCCCccccCcceeEEEEEeeeEEEecCCeEEEEecCCccccccccccCCCCCcc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEE Q lcl|Aclame:pro 398 IDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSI 477 (801) Q Consensus 398 i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v 477 (801) |++++++++++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|++++|+|++|+|+++ T Consensus 390 I~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v 469 (794) T protein:vir:99 390 IDVAVSTNRISILKYAVPFSEELILWSDQAQFVLSSDGGLTPTTIRLDLTTEFEVTEQARPYGIGRGVYFVSPRAKFSSV 469 (794) T ss_pred EEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEeeccCCCCceEeCCeEEEEecCCCeeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeE Q lcl|Aclame:pro 478 NRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVT 557 (801) Q Consensus 478 ~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~ 557 (801) +||+.+++.+|+|++.|||+|++|||+|+++++++++++|.+++|+++++|+|++|+|||+++||+|+|||||+|+|+++ T Consensus 470 ~r~~~~~~~~d~y~a~Dlt~~~~hl~~~~~~~~~a~~~~~~~~v~~~~~~g~l~~~~y~~~~~eq~v~aW~~~~~~g~~~ 549 (794) T protein:vir:99 470 RRFYAVQDVTQVKNAEDISAHVPYYVENGVFKMSGSSTENFLTILTEGNEQRVYFYKFLYLQEQLVQQSWSHWDFGVNCR 549 (794) T ss_pred EEeeeeccccCceehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeEEEEEcCCCeE Confidence 99988899999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEEcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccccce Q lcl|Aclame:pro 558 VFAAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGR 637 (801) Q Consensus 558 ~~~~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~ 637 (801) ++|+...+|+||++|+|+++++++||.+.+++.+...+++.+||||+..++....+++.+...+.+.++.++|+.|++|+ T Consensus 550 ~~~~~~~~d~l~~~v~r~~~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~g~ 629 (794) T protein:vir:99 550 VLCCDMIGAVMHLIIDSPSGVLMEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSYNDDDFKTRVKLKDIYGSTPANGQ 629 (794) T ss_pred EEEEEEcCCEEEEEEEeCCCEEEEEEEeeeCCCCCCCcccceeeeeeeeeeecccccccCcceeEEeccccccccccCCc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCccccceeecccc-ccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEE Q lcl|Aclame:pro 638 VSVVFPDGKIIEVDQPINGW-SSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVN 716 (801) Q Consensus 638 ~v~~~~dG~~~~~~~~~~g~-~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~ 716 (801) ++.+++||.+........++ .+..+++++|++++++|+|||+|+++++++||+++.+++.|+..+...+|+||||++|+ T Consensus 630 ~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~~~~~~~~~~~g~~~~~~~gr~~l~r~~~~ 709 (794) T protein:vir:99 630 YVFISLGGVTFTFDPPAGGWQANDGLIEFDGDLRGTKFFVGEAYTFLYEFSKFLIKTTDTADGVATEDIGRLQLRRAWVN 709 (794) T ss_pred eEEEEeCCceeeeecccceEecCccEEEecCCCCCcEEEEeeeeeEEEeecceEEeecCCCCceeeeccceEEEEEEEEE Confidence 99999999987765544333 35568899999999999999999999999999999888888888999999999999999 Q ss_pred eeccccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEec Q lcl|Aclame:pro 717 YEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLR 796 (801) Q Consensus 717 ~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~ 796 (801) +.+||+|.+.+++.+++..+.+.+.+++...+..+.+++++|+++||+.+|+++.+|+|+|+.|+||+|+||+|||+||+ T Consensus 710 ~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvlsi~~e~~y~~ 789 (794) T protein:vir:99 710 YDKSGNFRVEVNNQGRTFTYNMTGNRLSTNELILGDESLDTGQFRYAVSGNATQVTVSLISDTPNPLSIIGGGWEGYYVR 789 (794) T ss_pred eecccceEEEECCCccceeeeccccccccccccccccccccceEEEEecccccceEEEEEECCCCCEEEEEEEEEEEEec Confidence 99999999999999999888899999999999999999999999999999999999999999999999999999999999 Q ss_pred cccCC Q lcl|Aclame:pro 797 RSSGI 801 (801) Q Consensus 797 r~rr~ 801 (801) |+||| T Consensus 790 r~~~v 794 (794) T protein:vir:99 790 RSSGI 794 (794) T ss_pred cccCC Confidence 99999 No 6 >protein:vir:94583 Length: 792 # NCBI annotation: Tubular tail protein B # Family: family:all:825 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919014;genbank:gi:119637778;genbank:GeneID:5179343 Probab=100.00 E-value=4.8e-243 Score=1349.05 Aligned_cols=791 Identities=64% Similarity=1.077 Sum_probs=748.5 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||+.+++++.....+++++|+|+++|+|+|+ T Consensus 1 M~~i~~s~~n~~~GiSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~fv~~l~~~~~~~~~~~l~~~~~~~~q~y~l~ 80 (792) T protein:vir:94 1 MALISQSVKNLKGGISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSAEQYYVV 80 (792) T ss_pred CcceeeecchhhcceecCcchHHhhhhhhhhhcceeeeccccccCChhHHHHhhhcCCCCCcccEEEEEEeCCCceEEEE Confidence 99999999999999999999999999999999999999999999999999999998887888899999999999999999 Q ss_pred EeCCeEEEEeCCCeEEEEecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCCCcc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) |++++||||+.+|.++.+++..+|+.++++.++|+++|+||+|||+|+++||+++.|..+..| +.+++++++++++|+ T Consensus 81 f~~~~~rv~~~~g~~~~~~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~~--~~~~~~v~i~~g~y~ 158 (792) T protein:vir:94 81 FTGQGVRVFDLNGKEYDVKGDLSYVKVENPRDDLRMVTVADYTFIVNRNMVVRPDTTPLYTLK--ENGDCLINIRGGMYG 158 (792) T ss_pred EcCCeEEEEecCCceEEecccCceeeecCCcceeEEEEEcCEEEEEeCCccceeEecCcCCCC--CCceEEEEccCCCcc Confidence 999999999999999999999999999998899999999999999999999999999877654 466899999999999 Q ss_pred ceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCceeEEE Q lcl|Aclame:pro 161 RRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGL 240 (801) Q Consensus 161 ~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t~ 240 (801) ++|++++++.. .++++++++.+......+..+++..|...... .....+|.+...++.+++.++++..+.++ T Consensus 159 ~~y~i~i~~~~-~~~~~~~~t~~~~~~~~~~~~i~~~l~~~~~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 230 (792) T protein:vir:94 159 RTLAFTINNTK-IAYEIAHGDAPEHSKQTDAQWLVKKLAGLARL-------NVAFKGWTFTEGPGYIHVIAPSNSQINSL 230 (792) T ss_pred eeEEEEecCce-eeeeeecCcccceecccchhhhhhhhhhhccc-------cccccccEEEECCeEEEEEecCCceeeee Confidence 99999999864 56788999988888888888888887654322 22234688888999999999998888899 Q ss_pred EeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEEE Q lcl|Aclame:pro 241 QTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALV 320 (801) Q Consensus 241 t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv 320 (801) ++++|.+++++.+..+.++++++||+.|++|++|+|++..+.+.++||++|+..+++|+||++++...+++.++|||.++ T Consensus 231 ~~~~g~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~i~~~~~~~~d~y~v~~~~~~~~w~E~~~~~~~~~~~~~tmp~~lv 310 (792) T protein:vir:94 231 STEDGYADQLMNAVMHTSQSFSRLPVEAPNGYTVKIVGDTSKTSDMFYVQYDNMKKVWKEVAGWGVQKGLNGGTMPHALV 310 (792) T ss_pred ecccCcCcceeeeeeecccccccccccCCCCcEEEEEccCCCCccceEEEEEcCCceEEEecccceeeeecccccCeeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCccEEE Q lcl|Aclame:pro 321 RASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDV 400 (801) Q Consensus 321 ~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~~ 400 (801) ++++++|+++.++|++|.+||+++||.|||+|++|++|+||||||+|++|++|||||+||||||+++|++++.|||||++ T Consensus 311 ~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~ 390 (792) T protein:vir:94 311 RQADGSFQMQVLPWTQRTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDV 390 (792) T ss_pred EcCCCcEEEEeccccccccCccccCccceeccCCcceEEEEcceEEEecCCeEEEEccCCcccCccccccCCCCCccEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEEE Q lcl|Aclame:pro 401 AVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRY 480 (801) Q Consensus 401 ~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~ 480 (801) ++++++++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|++++|+|++|+|++++|| T Consensus 391 ~~ss~~~~~i~~~v~~~~~L~l~T~~~q~~l~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~~v~r~ 470 (792) T protein:vir:94 391 AVSHNRISILKYAVPFSEELLLWSDQAQFVLSAQGILSPKSVELNLTTEFDVSDRARPFGVGRGVYFASPRASYTSLNRY 470 (792) T ss_pred EecCCcceeeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEeeccCCCCceEeCCeEEEeecCCCeeEEEee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeEEEE Q lcl|Aclame:pro 481 YAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFA 560 (801) Q Consensus 481 ~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~~~~ 560 (801) +++++.+|+|++.|||+|++|||+|++..+++++++|.+++|+++++|+|++|+|||+++||+|+|||||+++|+++++| T Consensus 471 ~~~~~~~d~y~a~DlT~~~~hl~~~~v~~~~a~~~~~~~vv~~~~~~g~l~~~ty~~~~~e~~v~aW~~~~~~g~~~~~~ 550 (792) T protein:vir:94 471 YAVQDVSSVKSAEDMSAHVPNYIPNGVFSIRGSSTENFISVLSSNAPSRIFLYKFLYLNEEIAQQSWSHWELGSNVTVLA 550 (792) T ss_pred eeeccccCceehhhHHHHHHHhcCCceEEEEEeCCCCcEEEEEEcCCCeEEEEEEeecCCceEEEeEEEEEcCCcEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccccceEEE Q lcl|Aclame:pro 561 AQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSV 640 (801) Q Consensus 561 ~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~ 640 (801) +.+.+|+||++|+|+++++++||.++++..+.+...+.+||||+.++....+++++.+..+.......+|+.|++|+++. T Consensus 551 ~~~~~D~l~~~v~r~~~~~~~r~~~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~T~~~~~~~~gl~~l~G~~v~ 630 (792) T protein:vir:94 551 CDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFPDEPYRLYIDNKVKYVIPEGSYNDDTYATTVKPVDVYGMKYWTGKFYI 630 (792) T ss_pred EeecCCEEEEEEEeCCCEEEEEEEEeecccccCCCcceeeeeeeeeEEecCcceecCceeeeeccccccCcccccCcEEE Confidence 98899999999999999999999999999999999999999999999999999999999998888889999999999999 Q ss_pred EecCCccccceeeccc-cccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEeec Q lcl|Aclame:pro 641 VFPDGKIIEVDQPING-WSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYED 719 (801) Q Consensus 641 ~~~dG~~~~~~~~~~g-~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~ 719 (801) +.+||........... ....++++++|++++++|+|||+|+++++++||+++.+.++++.+....+|+||||++++|.+ T Consensus 631 v~~dG~~~~~~~~~~~~~~~~~~i~~~g~~~a~~v~VGl~y~~~~~~~~~~~~~~~g~~~~~~~~~gr~rl~r~~~~~~~ 710 (792) T protein:vir:94 631 VASDGLVSWFEPPRGGWPNGVPMLTMSGNREGETIYVGLAISFRYVFSKFLIKKTADDGSIATEDIGRLQLRRAWVNYED 710 (792) T ss_pred EEecCceeEeecccceecCCccEEEecCCccCCeEEEeeeeeEEEEeccceeeccCCCcCccccceeeEEEEEEEEeeec Confidence 9999976543332222 235668999999999999999999999999999999999888889999999999999999999 Q ss_pred cccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEecccc Q lcl|Aclame:pro 720 SGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRSS 799 (801) Q Consensus 720 tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~r 799 (801) ||.|.+++++.+++.++++.+++++..++..+.|++.+++++||+.+|+++.+|+|++++|+||+|+||+|||+||+|+| T Consensus 711 tg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P~tvlai~~eg~y~~r~~ 790 (792) T protein:vir:94 711 SGAFTVEVENTSRLFSYDMAGARLGSNVLRAGGLNVGTGQFRFPVTGNAQLNEVRIISEHTTPLNVIGCGWEGNYLRRSS 790 (792) T ss_pred cceeEEEEcCCCcceeeeeccceeccccccccccccccceEEEEeeccCceEEEEEEECCCCCEEEEEEEEEEEEecccc Confidence 99999999999999889999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CC Q lcl|Aclame:pro 800 GI 801 (801) Q Consensus 800 r~ 801 (801) || T Consensus 791 ~v 792 (792) T protein:vir:94 791 GI 792 (792) T ss_pred CC Confidence 99 No 7 >protein:vir:94713 Length: 785 # NCBI annotation: tail tube # Family: family:all:825 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338122;genbank:gi:77118200;genbank:GeneID:3707736 Probab=100.00 E-value=2.1e-239 Score=1329.07 Aligned_cols=783 Identities=51% Similarity=0.899 Sum_probs=731.0 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++.+. ...+++|+|+|+++|+|+|+ T Consensus 1 M~~~~~s~~n~~~GvSqq~D~~ry~~q~~~~~N~~~~~~gG~~rRpG~~~v~~l~~~~--~~~~~~~~f~~~~~~~y~l~ 78 (785) T protein:vir:94 1 MPLITQSIKNLKGGISQQPDILRFSDQGEAQVNCWSSESDGLQKRPPTVFKRRLNIDV--GSNPKFHLINRDEQEQYYIV 78 (785) T ss_pred CcceeeecchhhcceecCCchHHhhhHHhhhhcceeeeccCcccCChhHhhhcccCCC--CcCcEEEEEEeCCCceEEEE Confidence 9999999999999999999999999999999999999999999999999999987543 45678999999999999999 Q ss_pred EeCCeEEEEeCCCeEEEEecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCCCcc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) |++++||||+++|.++.|++..+|+.++++.++|+++|+||+|||+|++++|+++.+.++.. +.+.+++++++++++|+ T Consensus 79 ~~~~~irv~~~~G~~~~v~~~~~y~~~~~~~~~l~~~q~aD~~fi~n~~~~~~~~~~~~~~~-~~~~~~~~~~i~~g~y~ 157 (785) T protein:vir:94 79 FNGSNIQIVDLSGNQYSVSGSVDYVKSSNPRDDIRVVTVADYTFVVNRKVVVKGGSEKSHSG-YNRKARALINLRGGQYG 157 (785) T ss_pred EcCCeEEEEecCCcEEEEecCCCceeecCchhheeeEeeCCEEEEEcCCcceeeeeccCCcC-CCCCCceEEEecccccc Confidence 99999999999999999999999999998889999999999999999999999998877643 55778999999999999 Q ss_pred ceEEEEeCCceeEeeeeeccccccc-ceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCceeEE Q lcl|Aclame:pro 161 RRLSIEFNGAERAAVQLPDGSQPAH-VNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWG 239 (801) Q Consensus 161 ~~y~vti~~~~ta~~~tp~~s~~~~-~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t 239 (801) ++|+|.+++..++++++++++.... +...+..+++.++..++.+. .++|.+...++.+++.++++..+++ T Consensus 158 ~~y~i~i~g~~~at~~t~~~s~a~~s~~~~s~~~i~~~l~~~l~a~---------~t~~t~~~~g~~i~i~a~s~t~~~~ 228 (785) T protein:vir:94 158 RTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVTA---------YPTFTFDLGSGFLLITAPSGTDINS 228 (785) T ss_pred eeEEEeeCCcceeEEEEccCccccccccccchHHHHHHHHHHhhcc---------ccceeEEecCcEEEEEecCCccccc Confidence 9999999999999999999886544 46677788888887765432 2457777888889999999888899 Q ss_pred EEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEE Q lcl|Aclame:pro 240 LQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWAL 319 (801) Q Consensus 240 ~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~l 319 (801) ++++++.+++++.++.+.++++++||+.|++|++|+|.++.+++.++||++|+..+++|+||+++|...+++.++||+.| T Consensus 229 ~s~~~~~~~t~~~~~~~~~~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~g~w~e~~~~g~~~~~~~~tmp~~l 308 (785) T protein:vir:94 229 VETEDGYANQLISPVLDTVQTISKLPLAAPNGYIIKIQGETNSSADEYYVMYDSNTKTWKETVEPGVVTGFDNTTMPHAL 308 (785) T ss_pred eeeecccCCeEEEEEEeeccceeccccccCCCCEEEEEccCCCCccceEEEEEcCCceEEEecccceeeeeeccccceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCccEE Q lcl|Aclame:pro 320 VRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPID 399 (801) Q Consensus 320 v~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~ 399 (801) ++.++++|+++..+|++|.+||+++||.|||+|++|++|+||||||+|++|++|||||+||||||+++|++++.|||||+ T Consensus 309 ~~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~i~ 388 (785) T protein:vir:94 309 VRQSDGSFEFKALDWSKRGAGNDDTNPMPSFVDATINDVFFYRNRLGFLSGENVIMSRSASYFAFFPKSVATLSDDDPID 388 (785) T ss_pred EeccCCceEEeccccccccCCCcccCCcceecccccceEEEEeceEEEecCCeEEEEccCCcccCccccccCCCCCccEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEE Q lcl|Aclame:pro 400 VAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINR 479 (801) Q Consensus 400 ~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~ 479 (801) ++++++++|.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++++|+.+|++++|+|++|+|++++| T Consensus 389 ~~~~~~~~~~i~~~v~~~~~L~l~T~~~e~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~v~r 468 (785) T protein:vir:94 389 VAVSHPRISILKYAVPFSEQLLLWSDEVQFVMTSSGVLTSKSIQLDVGSEFALGDNARPFAVGRSVFFSAPRGSFTSIKR 468 (785) T ss_pred EEecCCcceeeEEEeecCCcEEEEecCcEEEEcCCCcccceeEEEEEEEeeeccCCCCceEeCCeEEEEecCCCeeEEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeEEE Q lcl|Aclame:pro 480 YYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVF 559 (801) Q Consensus 480 ~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~~~ 559 (801) |+++++.+++|++.|||+|++|||+|+++++++++++|.+++|+++++|+|++|+|||+++||+|+|||||+|+|.++++ T Consensus 469 ~~~~~~~~d~y~~~dlt~~~~~~~~g~~~~~~a~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW~r~~~~~~~~~~ 548 (785) T protein:vir:94 469 YFAVADVSDVKDADDTTGHVLSYIPNGVFDIQGTGTENYICVNSTGAYNRIYIYKFLFKDSVQLQASWSHWEFPKDDKIL 548 (785) T ss_pred eeeecccccceehhhHHHHHHHhcCCCcEEEEEecCCCcEEEEEEcCCCEEEEEEEeecCCceEEEEEEEEEeCCCeEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888 Q ss_pred EEEEcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccc-cCcccccceE Q lcl|Aclame:pro 560 AAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATI-YGMNFTKGRV 638 (801) Q Consensus 560 ~~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~-~gl~~l~g~~ 638 (801) |+...+|++|++++|.++.+++++...++..+.+.+.+.+||||+.++...+++++.++..++..++.. .|+.|+||++ T Consensus 549 ~~~~~~d~~~~vv~r~~g~~~~~ie~~~~~~d~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~~g~~~leg~~ 628 (785) T protein:vir:94 549 ASASIGSTMFIVRQHQGGVDIEHLKFIKEATDFPSEPYRLHVDSKVSMVIPIGSFNADTYKTTVDIGAAYGGNAPSPGRY 628 (785) T ss_pred EEEEeCCEEEEEEEcCCCEEEEEEEeecccCCCCCcceeEEeeeeeEEEecCcceeccccccccccccccccCCccCCeE Confidence 888889999999999988888888777777888888999999999999999999999998888776653 4899999999 Q ss_pred EEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEee Q lcl|Aclame:pro 639 SVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYE 718 (801) Q Consensus 639 v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~ 718 (801) +.+.+||.+++...+.. ...+++++|++++++|+|||+|+++++++||+++.++ ++......++|+||||++++|. T Consensus 629 v~v~adG~~~~~~~v~~---~~~tl~~~g~~~~~~v~vGl~y~~~~~~~~~~~~~~~-~~~~~~~~~gr~~l~r~~~~~~ 704 (785) T protein:vir:94 629 YLIDSQGAYLDLGELTS---ISTVITLNGDWSGRTVFIGRSYLMSYKFSRFLIKIED-DSGTQSEDTGRLQLRRAWVNYR 704 (785) T ss_pred EEEeeCCcCccCceEcC---CCcEEEecCCCCCceEEEeeeeeEEEeecceeEEecC-CCcccccccccEEEEEEEEEee Confidence 99999999988776654 3468999999999999999999999999999998665 4556778889999999999999 Q ss_pred ccccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 719 DSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) Q Consensus 719 ~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~ 798 (801) +||+|.++|++..++..+.+.++++++. ..+.|++++|+++|||.+|+++.+|+|+|++|+||+|+||+|||+||+|+ T Consensus 705 ~sg~~~v~v~~~~~~~~~~~~~~~~g~~--~~~~~~~~tg~~~vp~~g~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~ 782 (785) T protein:vir:94 705 DTGALRLIVRNGEREFVNTFNGYTLGQQ--TIGTTNIGDGQYRFAMNGNALTTSLTLESDYPTPVSIVGCGWEASYAKKA 782 (785) T ss_pred cccceEEEecCCCccceeeecCcccCcc--cccccccccceEEEEeecccceEEEEEEECCCCceEEEEEEEEEEEeccc Confidence 9999999999888887788999999864 55778999999999999999999999999999999999999999999999 Q ss_pred cCC Q lcl|Aclame:pro 799 SGI 801 (801) Q Consensus 799 rr~ 801 (801) ||| T Consensus 783 ~~v 785 (785) T protein:vir:94 783 RSV 785 (785) T ss_pred cCC Confidence 999 No 8 >protein:vir:8887 Length: 808 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813776;genbank:gi:29366731;genbank:GeneID:1258831 Probab=100.00 E-value=1.3e-233 Score=1297.30 Aligned_cols=789 Identities=56% Similarity=0.944 Sum_probs=723.3 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||+++++++.....+++++|+|+++|+|+++ T Consensus 1 M~~v~~s~~n~~~GvSqq~d~~R~~~q~~~~~N~~~~~~gG~~rRpgt~~v~~l~~~~~~~~~~~~~~~~~~~~~~y~v~ 80 (808) T protein:vir:88 1 MGLVSQSVKNLKGGISQQPDILRFSNQGALQINGWSSETQGLQKRPPTTFTKRLQNKGFLGTKPLVHLINRDAQEQYFVG 80 (808) T ss_pred CcceeeecchhccceeccchhHhhhhhhhhhhcceeeeccccccCCchheeeeeeccCCCCCCcEEEEEEeCcCceEEEE Confidence 99999999999999999999999999999999999999999999999999999988877778889999999999999999 Q ss_pred EeCCeEEEEeCCCeEEEEecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCCCcc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) |++++||||+++|.+++|++..+|+.+++++++|+++|+||+|||+|++++|++..+..+...++...++++++++++|+ T Consensus 81 ~~~~~i~v~~~~G~~~~v~~~~~y~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~~~~~vr~g~y~ 160 (808) T protein:vir:88 81 FSGTGLAVWDLKGNNYTVRGYNGYANCANPRTDLRLITVADYTFVVNRNTVCQMGSTLTHAAYPRLDGRAIINVRGGQYG 160 (808) T ss_pred EeCCeEEEEEcCCceEEEeecCcceEecCChhheeEEEEcCEEEEEcCCcceeecccccccCCCCCCccEEEEEcccccC Confidence 99999999999999999999999999999999999999999999999999999888876666677788899999999999 Q ss_pred ceEEEEeCCc-----eeEeeeeeccccccc-----------ceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECC Q lcl|Aclame:pro 161 RRLSIEFNGA-----ERAAVQLPDGSQPAH-----------VNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGP 224 (801) Q Consensus 161 ~~y~vti~~~-----~ta~~~tp~~s~~~~-----------~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~ 224 (801) ++|+|+|++. .+.++.+++++.+.. .......+++..+...+ .......+|.+.... T Consensus 161 ~~y~i~i~g~~s~~~~t~t~~~~~~s~~~v~~~~~~~~~~~~~~~~~~~ia~~l~~~~-------~~~~~~~~~~~~~~~ 233 (808) T protein:vir:88 161 RTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAGMNQVDMTDASWIAAELARQL-------TVSLGGSGWSFQAGT 233 (808) T ss_pred ceEEEEEecCCcceeeeEeEEEccCcccceeeccceeecccCCccccccchhhheeee-------eecccccceEEEecc Confidence 9999999863 455666666553321 12233344444443332 222333468888888 Q ss_pred ceEEEEeCCCceeEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeecc Q lcl|Aclame:pro 225 GFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGW 304 (801) Q Consensus 225 ~~~~i~~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~ 304 (801) +.+++..+++.+++++++++|.+++.+.+..+.|+++++||+.+|+|++++|.++.++..++||++|+...++|+||+++ T Consensus 234 ~~~~i~~~a~~~~~~~~t~~g~~~~~~~~~~~~v~~~~~lp~~~p~g~~v~i~~~~~~~~~~~yv~~~~~~~~w~e~~~~ 313 (808) T protein:vir:88 234 GWILINAPANDNVRQIATKDGYADTLLSGFIYQVQTFTKLPANAPPGYLVEITGESARSGDNYWVQYDASGKVWKETAKP 313 (808) T ss_pred ceEEEEeccCceeEEEcccCCcCcceeeeeeeeccceeeccccCCCCcEEEEEecCCCCCceeEEEEEcCCeEEEEeeec Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ceeeEEecCcceEEEEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEecCCEEEEEecCCcccc Q lcl|Aclame:pro 305 NTRTHLYYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNF 384 (801) Q Consensus 305 ~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF 384 (801) +...+++.++|||.|++.++++|+|+.++|++|.+||+++||.|||+|++|++|+||||||+|++|++|||||+|||||| T Consensus 314 ~~~~~~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF 393 (808) T protein:vir:88 314 KIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPMPSFVGATINDVFFFRNRLGFLSGENVVMSRTSKYFNF 393 (808) T ss_pred cceeeecccceeEEEEecCCceEEEEecccccccccccccCccceecCCceeEEEEEcceEEEeeCCeEEEEeccCcccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCCe Q lcl|Aclame:pro 385 FPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRN 464 (801) Q Consensus 385 ~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~ 464 (801) +++++.++.|||||++++++++++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|++.|+|+.+|++ T Consensus 394 ~~~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~ 473 (808) T protein:vir:88 394 FPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSDQAQFVLSSKTILSSKTIELDLTTEFDVSDGARPYGIGRG 473 (808) T ss_pred cCCcccCCCCCccEEEEecCCccceeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEecccCCCCceEeCCe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeE Q lcl|Aclame:pro 465 VYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQ 544 (801) Q Consensus 465 v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v 544 (801) ++|++++|+|++++|++++++.+|+|++.|||+|++|||+++++++++++++|.+++|+++++|+|++|+|||+++||+| T Consensus 474 v~f~~~~g~~~~v~r~~~~~~~~d~y~~~dlt~~~~h~~~~~~~~~~~~~~~~~~~v~~~~~~g~l~~~~y~~~~~e~~v 553 (808) T protein:vir:88 474 VYFAAPRASFTSLKRYYAIQDVSDVKSAEDVSAHVPSYITNTVHAIHGSGTENFVSILSDGSPNKVFIYKFLYLDEILQQ 553 (808) T ss_pred EEEEecCCCeeEEEEEEEeeeccCceehhhHHHHHHHhcCCCeEEEEEeCCCCeEEEEEEcCCCEEEEEEEeccCCceeE Confidence 99999999999999998999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EeEEeeecCCCeEEEE--EEEcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeecccccccccccee Q lcl|Aclame:pro 545 QSWSHWDFGDNVTVFA--AQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTS 622 (801) Q Consensus 545 ~aW~~w~~~g~~~~~~--~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~ 622 (801) +|||||+|+|+++++| +...+|+||++|+|+++.+++||.+..+..+...+++.+||||+.++.. +.++.++..+. T Consensus 554 ~aW~r~~~~g~~~~~~~~~~~~~d~l~~vV~r~~~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~--g~~~~~~~~t~ 631 (808) T protein:vir:88 554 QSFSHWEFGDAATTRVLAASCIGSYCYLMIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKTIVL--GAYNIDTNLTS 631 (808) T ss_pred EeeEEEecCCCeeEEEEEEeccCCEEEEEEEcCCcEEEEEEeeccCCCCCccccceeeeeeeeeecc--ccccCccccce Confidence 9999999999988655 3556899999999999999999999888888888999999999988754 56777777777 Q ss_pred ecccc-ccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCcee Q lcl|Aclame:pro 623 ISLAT-IYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTA 701 (801) Q Consensus 623 ~~~~~-~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~ 701 (801) +.+.. ..++.|+++..+.+.+||.+... ...++...+++++++++++++|+|||+|+++++++||+++.+++++... T Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~dg~~~~~--~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~p~~~~~~~g~~~~~ 709 (808) T protein:vir:88 632 FDVRTAYGGTPGPESTFYTIDQQGVLIEH--EARDWATNPYISFVGNRAGEQMVIGKQYTFQYEFSKFLIKQTADDGSTS 709 (808) T ss_pred eecccccccccccceeEEEEcCCceEEee--ecccccCcceEEeCCCccCceEEEeeeeeEEEEecceEEecCCCCccee Confidence 66554 45788999999999999986533 3456678889999999999999999999999999999999988888888 Q ss_pred eeeeeeEEEEEEEEEeeccccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEeecCceEEEEEEECCcC Q lcl|Aclame:pro 702 TEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDAST 781 (801) Q Consensus 702 ~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~ 781 (801) ....+|+||||+++++.+||+|.+++++..++..+.+.+++++.. ...+.+++++|+++||+.+|+++.+|+|+|++|+ T Consensus 710 ~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~d~P~ 788 (808) T protein:vir:88 710 TEDIGRLQLRRAWLNYEESGAFEINVNNGSSEFVYVMTGGRLGIQ-RVLGELSVGTGQFKFPVTGNAVNQRVTITSSNPN 788 (808) T ss_pred ecccceEEEEEEEEEeecccceEEEeCCCcccceeeccCcccCcc-cccCccccccceEEEEecccCceeEEEEEECCCC Confidence 888999999999999999999999999888888888999999865 4578889999999999999999999999999999 Q ss_pred CEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 782 PLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 782 P~tvlsi~~eg~y~~r~rr~ 801 (801) ||+|+||+|||+||+|+||| T Consensus 789 P~tilsi~~eg~y~~r~~~v 808 (808) T protein:vir:88 789 PLNVIGCGWEGNYIRRSSGI 808 (808) T ss_pred ceEEEEEEEEEEEeccccCC Confidence 99999999999999999999 No 9 >protein:vir:105647 Length: 800 # NCBI annotation: putative tail tubular B protein # Family: family:all:825 # MgeID: mge:1674 # MgeName: K1E # Cross-refs: genbank:acc:YP_425011;genbank:gi:83571759;uniprot:Q2WC41;genbank:GeneID:3837288 Probab=100.00 E-value=2.2e-220 Score=1224.87 Aligned_cols=781 Identities=24% Similarity=0.371 Sum_probs=688.4 Q ss_pred cceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEEE Q lcl|Aclame:pro 2 ALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVVF 81 (801) Q Consensus 2 a~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~~ 81 (801) =.|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++++.......+.+..+.+++++|++++ T Consensus 1 ~~v~~s~~nl~~GvSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (800) T protein:vir:10 1 MEVQGSLGRQIQGISQQPPAVRLDGQCTTMVNMVPDVVNGTQSRMGTTHIAKLLDEGTDNMATHHYRRGEGDEEYFFTLK 80 (800) T ss_pred CeEEeecchhcccccccchhHhhhhhhhhhhcceeeeccCcccCCcceEEEeecCCCCCccEEEEEecCCccceEEEEEE Confidence 35899999999999999999999999999999999999999999999999999877655443333333335667788888 Q ss_pred eCCeEEEEeCCCeEEEEecCCcc---c-ccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCC Q lcl|Aclame:pro 82 TGEDIKVFDLDGKEYQVRGDRSY---V-RTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGG 157 (801) Q Consensus 82 ~~~~~rv~~~~g~~~~v~~~~~y---~-~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 157 (801) ..+++|||+++|++++|....++ + .++++.++|+++|+||+|||+|++++|+++.|..+.. ..+++++++++ T Consensus 81 ~g~~~rv~~~~G~~~~v~~~~~~~~~~~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~~----~~~~~~~vr~g 156 (800) T protein:vir:10 81 KGQVPEIFDKHGRKCNVISQDAPMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKVSNRKSPKV----GDKAIVFCAYG 156 (800) T ss_pred cCCeEEEEecCCcEEEeecCCcceeeeeccCCchhhEEEEEEcCEEEEecCcccccccccCCCCC----CceEEEEEecc Confidence 88999999999999998865543 3 3567788999999999999999999999988876543 35799999999 Q ss_pred CccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCcee Q lcl|Aclame:pro 158 QYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNV 237 (801) Q Consensus 158 ~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 237 (801) +|+++|+|++++..++.+++++++....+.+++.++++.+|..++.+. ...++|.+...++.+++.+.++. . T Consensus 157 ~y~~~y~i~i~g~~~~~~~t~~~~~~~~~~~~s~~~i~~~L~~~l~~~-------~~~~~~t~~~~g~~i~i~~~~~~-~ 228 (800) T protein:vir:10 157 QYGTSYSIIINGTTAASFKTPDGGSAEHVEQIRTERITSELYSKLQQW-------SGVNDYEIQRDGTSIFIERRDGK-S 228 (800) T ss_pred ccccceeEEeccceEEEEEecCCCcccccccccHHHHHHHHHhhhhhc-------CcccceEEEEcCcEEEEEEecCC-c Confidence 999999999999999999999999999999999999999998776542 22346788888888999888765 4 Q ss_pred EEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEcc---CceeEEEeeccceeeEEecCc Q lcl|Aclame:pro 238 WGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDL---NRKVWVETIGWNTRTHLYYHT 314 (801) Q Consensus 238 ~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~---~~~~W~e~~~~~~~~~~~~~t 314 (801) +++++.++..++.+..+++.++++++||..|++|+.++|.++.+.+.+.||++|+. +.++|+||++++...+++.++ T Consensus 229 ~~~~~~~~~~~~~~~~~~~~v~~~~~Lp~~~~~g~~~~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~~~~~t 308 (800) T protein:vir:10 229 FTVTTTDGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLLGFDKGT 308 (800) T ss_pred eEEEEeecCCcceEEEEEeeccceeeccccCCCCceEEEEcCCCCCCceeEEEEEeccccceEEEeecccCceeeeeccc Confidence 68999999999999999999999999999999999999999999999999999985 457899999999999999999 Q ss_pred ceEEEEEec----CCeEEeeccCcCccccCCcccccCccccC----CCceEEEEEcCeeEEecCCEEEEEecCCcccccc Q lcl|Aclame:pro 315 MPWALVRAS----DGNFDFKVLEWGARTVGDDTTNPYPSFTG----QTINDIFFFRNRLGFLSGENIILSRTSKYFNFFP 386 (801) Q Consensus 315 ~p~~lv~~~----~~t~~~~~~~w~~~~~gd~~s~p~psf~g----~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~ 386 (801) |||.+++.+ .++|++...+|++|.+|||++||.|||+| ++|++|+||||||+|++|++|||||+||||||++ T Consensus 309 mp~~lv~~~~~~~~~~~~~~~~~w~~r~~gd~~tnp~psf~~~~~~~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~ 388 (800) T protein:vir:10 309 MPYIIERTGIIDGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTAGEAVIASRTSYFFDFFR 388 (800) T ss_pred ccEEEEEeeeeecceeEEEEeccccccccCCCCCCCCchhcCCCCCCCceeEEEEeeeEEEeeCCeEEEEccCCcccccc Confidence 999999886 77999999999999999999999999998 5799999999999999999999999999999999 Q ss_pred ccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCCeEE Q lcl|Aclame:pro 387 ASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVY 466 (801) Q Consensus 387 ~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~ 466 (801) +|++++.|||||++++++++++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|++++ T Consensus 389 ~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~q~~l~g~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~ 468 (800) T protein:vir:10 389 YTVISALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPGDKPLEKSNALLKPVTTFEVNNKVKPVVTGESVM 468 (800) T ss_pred ccccCCCCCccEEEEEcCCcceeeeeEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeeeccCCCCceEeCCeEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEe Q lcl|Aclame:pro 467 FASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQS 546 (801) Q Consensus 467 fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~a 546 (801) |+|++|+|++|+||.| ++.+|+|++.|||+|++|||+|++.+++++++|++++||+++++++|++|+|||+++||+|+| T Consensus 469 Fv~~~g~~s~vre~~~-~~~~d~~~a~DlT~~~~hl~~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~yl~~~~e~~~~a 547 (800) T protein:vir:10 469 FATNDGSYSGVREFYT-DSYSDTKKAQAITSHVNKLIEGNITNMAASTNVNRLLVTTDKYRNIIYCYDWLWQGTDRVQSA 547 (800) T ss_pred EecCCCCeeEEEEEee-eecccceehhhHHhHHHHhcCCceEEEEEeCCCCeEEEEEEcCCCeEEEEEEeecCCceEEEE Confidence 9999999999999987 566789999999999999999999999999999999999999999999999999999999999 Q ss_pred EEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeecc- Q lcl|Aclame:pro 547 WSHWDFGDNVTVFAAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISL- 625 (801) Q Consensus 547 W~~w~~~g~~~~~~~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~- 625 (801) ||||++++...++|+...+|+||++|+|+++.++|||...... ....++++||||+..+.....+.+.........+ T Consensus 548 W~~w~~~~~~~~~~~~~~~d~l~~iv~r~~~~~ier~~~~~~~--~~~~~~~~~lD~~~~~~~~~~~~~~~~~~~~~~~~ 625 (800) T protein:vir:10 548 WHVWEWPMGTKVRGMFYSGELLYLLLERGDGVYLEKMDMGDAL--TYGLNDRIRMDRQAELIFKHFKAEDEWISEPLPWT 625 (800) T ss_pred EEEEEcCCCcEEEEEEEeCCeEEEEEECCCcEEEEEEecccCc--cccccceeeeecceeecccccccCcceEEEecccc Confidence 9999998777777877889999999999999999998664432 2456778999998876655444333322211111 Q ss_pred -ccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeee Q lcl|Aclame:pro 626 -ATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATED 704 (801) Q Consensus 626 -~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~ 704 (801) ....++.+++......+.+|.+.....+.++++..+....+|++++++|+|||+|+++++++||+++.++ .+... T Consensus 626 ~~~~~~~~~~~~~~~~~~~~g~v~~~~~~~~g~~~~~~~~~~g~~~~~~v~VGl~Y~s~~~~~~~~i~~~~----g~~~~ 701 (800) T protein:vir:10 626 PTNPELLDCILIEGWDSYIGGSFLFKYKPSDNTLSTTFDMHDDNHVKAKVIVGQIYPQEFEPTPVVIRDRQ----DRVSY 701 (800) T ss_pred ccCCcceEEeeeccceeecCceeEEEEEecCCceEeeeeecCCCcccceEEEeeeeeEEEeecceEEEcCC----Ccccc Confidence 1234556666666677777888777777777776665556889999999999999999999999998443 24566 Q ss_pred eeeEEEEEEEEEeeccccEEEEeCCCCcc--cccccccccccccccccccccccccEEEEEEeecCceEEEEEEECCcCC Q lcl|Aclame:pro 705 IGRLQLRRAWVNYEDSGAFTIRVNNLSRE--FIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTP 782 (801) Q Consensus 705 ~~r~~i~~~~v~~~~tg~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~P 782 (801) .+|+||+|++|+|.+||+|.+++++.+++ ..+...+++.+...+..+.+++++|+++||+.+|+++.+|+|++++|+| T Consensus 702 ~~r~~i~r~~~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~~g~~~~~~v~i~~d~P~P 781 (800) T protein:vir:10 702 IDVPVVGLVHLNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPLRAKSTDAVYRIIVESPHT 781 (800) T ss_pred cCCeEEEEEEEEeecCceEEEEeccCcccceeEEccCCeeccccccccCcccccCceEEEEEeccCceeEEEEEECCCCc Confidence 78999999999999999999999988774 4466777888888888999999999999999999999999999999999 Q ss_pred EEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 783 LNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 783 ~tvlsi~~eg~y~~r~rr~ 801 (801) |+|+||+|||+||+|+||| T Consensus 782 ~tvlai~~eg~y~~r~~rv 800 (800) T protein:vir:10 782 FQLRDIEWEGSYNPTKRRV 800 (800) T ss_pred EEEEEEEEEEEeecccccC Confidence 9999999999999999999 No 10 >protein:vir:97014 Length: 800 # NCBI annotation: 33 # Family: family:all:825 # MgeID: mge:1644 # MgeName: K1-5 # Cross-refs: genbank:acc:YP_654134;genbank:gi:108862018;genbank:GeneID:5075963 Probab=100.00 E-value=2.6e-220 Score=1224.42 Aligned_cols=771 Identities=25% Similarity=0.379 Sum_probs=682.5 Q ss_pred cceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCC-CcEEEEE Q lcl|Aclame:pro 2 ALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDE-FEQYFVV 80 (801) Q Consensus 2 a~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~-~~~y~l~ 80 (801) =.|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||+++++++.. .....|.+++|+ +|+|+++ T Consensus 1 ~~v~~s~~n~~~GvSqq~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~fva~l~~~~~~-~~~~~~~~~~d~~eq~~v~~ 79 (800) T protein:vir:97 1 MEVQGSLGRQIQGISQQPPAVRLDGQCTAMVNMIPDVVNGTQSRMGTTHIAKILDAGTD-DMATHHYRRGDGDEEYFFTL 79 (800) T ss_pred CeeEeechhhhcccccCchhHhhhhhhhhhhcceeccccccccCCchhhheeecCCCcc-cceeEEEEEcCCceEEEEEE Confidence 35899999999999999999999999999999999999999999999999999887643 344556666765 4567888 Q ss_pred EeCCeEEEEeCCCeEEEEecCCccc----ccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecC Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYV----RTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRG 156 (801) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~y~----~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 156 (801) |+++++|||+++|.++.|++..+|. .+++++++|+++|+||+|||+|++++|++..+..+ ....++++++++ T Consensus 80 ~~~~~~rv~~~~G~~~~v~~~~~~~~y~~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~----~~~~~~~~~v~~ 155 (800) T protein:vir:97 80 KKGQVPEIFDKYGRKCNVTSQDAPMTYLSEVVNPREDVQFMTIADVTFMLNRRKVVKASSRKSP----KVGNKAIVFCAY 155 (800) T ss_pred EcCCEEEEEecCCcEEEEecCCcceEEEeccCCCccceeEEEEcCEEEEeeCceeccccccccc----CCCcceEEEEee Confidence 9999999999999999999887653 45678899999999999999999999998766543 356789999999 Q ss_pred CCccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCce Q lcl|Aclame:pro 157 GQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDN 236 (801) Q Consensus 157 g~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 236 (801) ++|+++|+|+|++..++.+.+++++++.++...+..+|+.+|...+.+. ....+|.+...+..+++.++++.+ T Consensus 156 g~y~~~y~i~I~~~~~~~~~t~~~t~~~~~~~~~~~~ia~ql~~~~~~~-------~~~~~~t~~~~G~~~~i~~~~~~~ 228 (800) T protein:vir:97 156 GQYGTSYSIVINGANAASFKTPDGGSADHVEQIRTERITSELYSKLQQW-------SGVSDYEIQRDGTSIFIERRDGAS 228 (800) T ss_pred cccceeeeeccCCcceEEEEEcCCCCcccceeccHHHHHHHHHHhhhcc-------ccccceEEEeCCcEEEEEEcCCce Confidence 9999999999999999999999999999999999999999988776532 223567788888889998887754 Q ss_pred eEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccC---ceeEEEeeccceeeEEecC Q lcl|Aclame:pro 237 VWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLN---RKVWVETIGWNTRTHLYYH 313 (801) Q Consensus 237 ~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~---~~~W~e~~~~~~~~~~~~~ 313 (801) +++++++++.++.+..+++.++++++||+.|++|+.++|+++.+++.+.||++|+.. .++|+||++++...+|+.+ T Consensus 229 -~~v~t~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~~~~~ 307 (800) T protein:vir:97 229 -FTITTTDGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLLGFDKG 307 (800) T ss_pred -EEEEecCCcCceeeeEEeeeccchhhchhhCCCCcEEEEEccCCCCCceEEEEEEecccCcceEEEeeccccccceecc Confidence 689999999999999999999999999999999999999999999999999999854 5789999999999999999 Q ss_pred cceEEEEEe----cCCeEEeeccCcCccccCCcccccCccccC----CCceEEEEEcCeeEEecCCEEEEEecCCccccc Q lcl|Aclame:pro 314 TMPWALVRA----SDGNFDFKVLEWGARTVGDDTTNPYPSFTG----QTINDIFFFRNRLGFLSGENIILSRTSKYFNFF 385 (801) Q Consensus 314 t~p~~lv~~----~~~t~~~~~~~w~~~~~gd~~s~p~psf~g----~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~ 385 (801) +|||.+++. ..++|++++.+|++|.+||+++||.|+|++ ++|++|+||||||+|++|++|||||+||||||+ T Consensus 308 tmp~~~~~~~~~~~~g~~~~~~~~w~~r~~gd~~tnp~p~f~~~~~~~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~ 387 (800) T protein:vir:97 308 TMPYIIERTDIINGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTAGEAVIASRTSYFFDFF 387 (800) T ss_pred cceEEEEEeecccccceeEEEeccccccccCccccCccccccCCcCCCCceeEEEEeeeEEEecCCeEEEEecCCccccc Confidence 999999997 577999999999999999999999999998 799999999999999999999999999999999 Q ss_pred cccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCCeE Q lcl|Aclame:pro 386 PASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNV 465 (801) Q Consensus 386 ~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v 465 (801) ++|++++.|||||++++++++++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|+++ T Consensus 388 ~~t~~~~~DdD~I~~~~ss~~v~~i~~~v~~~~~L~i~T~~~q~~ls~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v 467 (800) T protein:vir:97 388 RYTVISALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQFILPGDKPLEKSNALLKPVTTFEVNNKVKPVVTGESV 467 (800) T ss_pred cccccCCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeeeccCCCCcEEeCCeE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEE Q lcl|Aclame:pro 466 YFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQ 545 (801) Q Consensus 466 ~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~ 545 (801) +|+|++|+|++++||.+ ++.+|+|++.|||+|++|||+|++++++++++++.++||+++++|+|++|+|||+++||+|+ T Consensus 468 ~fv~~~g~~s~vre~~~-~~~~d~~~a~DlT~~~~hl~~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~~~~ 546 (800) T protein:vir:97 468 MFATNDGSYSGVREFYT-DSYSDTKKAQAITSHVNKLIEGNITNMAASTNVNRLLVTTDKYRNIIYCYDWLWQGTDRVQS 546 (800) T ss_pred EEeeCCCCeeEEEEEee-eecccceehhhHHHHHHHhcCCceEEEEEeCCCCeEEEEEEcCCCEEEEEEEeecCCceEEE Confidence 99999999999999987 56679999999999999999999999999999999999999999999999999999999999 Q ss_pred eEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEe-----------eccccc Q lcl|Aclame:pro 546 SWSHWDFGDNVTVFAAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYT-----------IPAGTY 614 (801) Q Consensus 546 aW~~w~~~g~~~~~~~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~-----------~~~~t~ 614 (801) |||||++++...++|+...+|+||++|+|+++.++|||.+.... .....+.++||+..... .+...+ T Consensus 547 aW~~~~~~~~~~~~~~~~~~d~l~~vv~r~~~~~ler~~~~~~~--~~~~~~~~~lD~~~~~~~~~~~~~~~~v~~~~~~ 624 (800) T protein:vir:97 547 AWHVWKWPIGTKVRGMFYSGELLYLLLERGDGVYLEKMDMGDAL--TYGLNDRIRMDRQAELVFKHFKAEDEWVSEPLPW 624 (800) T ss_pred eEEEEecCCCeEEEEEEEcCCeEEEEEEcCCcEEEEEEecccCc--CcccccceeccccceeeeeeeecccceEeccccc Confidence 99999999988889988889999999999999999998754332 23455678888643321 122222 Q ss_pred cccccceeeccccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEec Q lcl|Aclame:pro 615 NDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKT 694 (801) Q Consensus 615 ~~~~~~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~ 694 (801) . .+.........++|++|++|+.+.... +... ++.......+++++++++|+|||+|+++++|+||+++.. T Consensus 625 ~-~~~~~~~~~~~v~g~~~~~G~~v~~~~-~~~~-------~~~~~~~~~~~~~~~~~~v~vGl~Y~~~~~~~p~~i~~~ 695 (800) T protein:vir:97 625 V-PTNPELLDCILIEGWDSYIGGSFLFKY-NPSD-------NTLSTTFDMYDDSHVKAKVIVGQIYPQEFEPTPVVIRDN 695 (800) T ss_pred c-CCCcceeEEEEecccccccCceEEEEe-cCcc-------CcccccceEEeCCCCCcEEEEeeeeeEEEEecceEEEec Confidence 2 112222233456899999999986553 3222 233444567889999999999999999999999999855 Q ss_pred CCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCccc--ccccccccccccccccccccccccEEEEEEeecCceEE Q lcl|Aclame:pro 695 AEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREF--IYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNL 772 (801) Q Consensus 695 ~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~ 772 (801) .+ .....+|+||+|++|+|.+||+|++.|++.+++. .+...+++++...+..+.|++++|+++|||.+|+++.+ T Consensus 696 ~g----~~~~~~r~~i~r~~~~~~~sg~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~tg~~~vp~~g~~~~~~ 771 (800) T protein:vir:97 696 QD----RVSYIDVPVVGLVHLNLDMYPDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVEPREGVFRFPLRAKSTDVV 771 (800) T ss_pred CC----CceeecceEEEEEEEeecccccEEEEEccccCCceeeeecCccccccccccCCccccccceEEEEeecccceeE Confidence 33 3456789999999999999999999999988763 44678899999999999999999999999999999999 Q ss_pred EEEEECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 773 VTIESDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 773 v~i~~~~P~P~tvlsi~~eg~y~~r~rr~ 801 (801) |+|+|++|+||+|+||+|||+||+|+||| T Consensus 772 v~i~~d~PlP~tvlsi~~eg~y~~r~~rv 800 (800) T protein:vir:97 772 YRIIVESPHTFQLRDIEWEGSYNPTKRRV 800 (800) T ss_pred EEEEECCCCcEEEEEEEEEEEeecccccC Confidence 99999999999999999999999999999 No 11 >protein:vir:7021 Length: 803 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:141 # MgeName: SP6 # Cross-refs: genbank:acc:NP_853594;genbank:gi:31711676;genbank:GeneID:1481802 Probab=100.00 E-value=4.7e-220 Score=1223.03 Aligned_cols=778 Identities=24% Similarity=0.370 Sum_probs=679.8 Q ss_pred cceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcC---CCcEEE Q lcl|Aclame:pro 2 ALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRD---EFEQYF 78 (801) Q Consensus 2 a~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~---~~~~y~ 78 (801) =+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++++... ..+++.++++ ++|+|+ T Consensus 1 ~~v~~s~~nl~~GvSqQ~d~~R~~~q~~~~~N~~~~~~gGl~rRpGt~~va~l~~~~~~--~~~~~~~~~~~~~~e~~~~ 78 (803) T protein:vir:70 1 MEVQGSLGRQIQGISQQPPAVRLDGQCSEMVNMVPDVVEGTKSRMGTTHIAKLLEYGED--DMAVHHYRRGGEGEEEYFF 78 (803) T ss_pred CeEEeecchhccccccCchHHhhhhhhhhhhcceeeeccccccCChhhhhhhhcCCCcc--cceeeEEEecCCCceEEEE Confidence 47999999999999999999999999999999999999999999999999999876533 3344555543 568999 Q ss_pred EEEeCCeEEEEeCCCeEEEEecCCccc----ccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEe Q lcl|Aclame:pro 79 VVFTGEDIKVFDLDGKEYQVRGDRSYV----RTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINV 154 (801) Q Consensus 79 l~~~~~~~rv~~~~g~~~~v~~~~~y~----~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 154 (801) ++|++++||||+++|.+++|++..+|. .+++++++|+++|+||+|||+|++++|++..+..+ .+..++++++ T Consensus 79 ~~~~~~~irv~~~~G~~~~v~~~~~~~~~l~~~~~~~~~l~~~tvaD~~fi~n~~~~~~~~~~~~~----~~~~~~~~~v 154 (803) T protein:vir:70 79 IMKKGQVPEIFDKQGRKCMVQSQDAPMTYLSEVTNPREDVQFMTIADVTFMLNRKKIVKARPERSP----QVGSTAIVFM 154 (803) T ss_pred EEecCCeEEEEEcCCcEEEEecCCceeEEEeecCCChhheeEEEEcCEEEEecCceeeeeccccCC----CCCCceEEEE Confidence 999999999999999999999887763 45678889999999999999999999998655432 3556899999 Q ss_pred cCCCccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCC Q lcl|Aclame:pro 155 RGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNN 234 (801) Q Consensus 155 ~~g~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 234 (801) ++++|+++|+|+|++..++.+++++++....+...+..+++.++...+.+ .....+|.+...+..+++.+.++ T Consensus 155 r~g~y~~~y~itIng~~~a~~~t~~~~~~~~~~~~~~~~ia~~l~~~~~~-------~~s~a~~~~~~~g~~~~i~~~~~ 227 (803) T protein:vir:70 155 AYGQYGTHYKIIIDGVVAAGYKTRDGAEAHHIEDIRTESIAYNLYQSLQS-------WDKIADYEIQLDGTSIYITRRDG 227 (803) T ss_pred eecCCcceEEEEeCCcceEEEEeCCCcccccccccchhhhhhhhhhheec-------cccccceEEEECCcEEEEEEcCC Confidence 99999999999999999999999999999999999999999988755432 12234688889999999999999 Q ss_pred ceeEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccC---ceeEEEeeccceeeEEe Q lcl|Aclame:pro 235 DNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLN---RKVWVETIGWNTRTHLY 311 (801) Q Consensus 235 ~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~---~~~W~e~~~~~~~~~~~ 311 (801) .+.++++++++.+++.+...++.++++++||+.|++|+.++|.++.+.+.|.|||+|+.. .++|+||++++...+++ T Consensus 228 ~~~~~~~t~~g~~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~g~~~~d~y~v~~~~~~~~~~~w~e~a~~g~~~~~~ 307 (803) T protein:vir:70 228 STTFDITTEDGAKGKDLVAIKYKVASTDLLPSRAPEGYKVQVWPTGSKPESRYWLQAEKQNGNIVSWKETLAADVLIGFD 307 (803) T ss_pred CCeeEEEeecCcCCcEEEEEEecccceeeccccCCCCceEEEEcCCCCCCceeeEEEEeccCCccceEeeeccceeeeee Confidence 999999999999999999999999999999999999999999999999999999999864 35899999999999999 Q ss_pred cCcceEEEEEecC----CeEEeeccCcCccccCCcccccCccccC----CCceEEEEEcCeeEEecCCEEEEEecCCccc Q lcl|Aclame:pro 312 YHTMPWALVRASD----GNFDFKVLEWGARTVGDDTTNPYPSFTG----QTINDIFFFRNRLGFLSGENIILSRTSKYFN 383 (801) Q Consensus 312 ~~t~p~~lv~~~~----~t~~~~~~~w~~~~~gd~~s~p~psf~g----~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~n 383 (801) .+||||.+++.+. ++|+++.++|+.|.+|||++||.|+|++ ++|++|+||||||+|++|++|||||+||||| T Consensus 308 ~~t~p~~~v~~~~~~~~~~~~~~~~~~~~r~~gdd~tnp~psf~~~~~~~~~~~v~f~q~RL~f~~~~~v~~Srtgd~~n 387 (803) T protein:vir:70 308 KSTMPYIIERTGFVNGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTLGGMFMVQNRLCVTAGEAVIATRTSYFFD 387 (803) T ss_pred cccccEEEEEEEEeecceeEEEEeeccccccccccccCccccccCccCCCCceeEEEEeceEEEeeCCeEEEEccCCccc Confidence 9999999998753 6799999999999999999999999997 6899999999999999999999999999999 Q ss_pred cccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCC Q lcl|Aclame:pro 384 FFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGR 463 (801) Q Consensus 384 F~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~ 463 (801) |+++|++++.|||||++++++++++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|+ T Consensus 388 F~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~i~T~~~q~~l~g~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~ 467 (803) T protein:vir:70 388 FFRYTAVSAVATDPFDVFSDASEVYQLKHAVTLDGSTVLFADKSQFILPGDKPLEKSNVLLKPVTTFEVNNNVKPVATGE 467 (803) T ss_pred cccccccCCCCCccEEEEecCCcceeeEEEeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEEeeccCCCccEEeCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eEEEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCcee Q lcl|Aclame:pro 464 NVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIR 543 (801) Q Consensus 464 ~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~ 543 (801) +++|++++|+|++++||.+ ++.+|+|++.|||+|++|||++++.+++++++|+.++||+++++++||+|+|||.++||+ T Consensus 468 ~v~fv~~~g~~s~vre~~~-~~~~d~y~a~Dlt~~a~hl~~~~v~~~~~~~~~~~~v~~~~~~~~~l~~~~yl~~~~e~~ 546 (803) T protein:vir:70 468 SVMFATSEGAYSGIREFYT-DSYSDTKKAQAITSHVNKLLEGNVIMMSASTNVNRLLVLTDKYRNIIYCYDWLWQGTERV 546 (803) T ss_pred eEEEeccCCCeeEEEEEec-cccccceehhhhhhhhHhhcCCceEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCcEE Confidence 9999999999999999987 566789999999999999999999999999999999999999999999999999999999 Q ss_pred EEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCE-EEEEEEEeecCCCCCcCcceeeeeeeeEEeecccccccccccee Q lcl|Aclame:pro 544 QQSWSHWDFGDNVTVFAAQVINSTMTVLMGNEHAV-WMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTS 622 (801) Q Consensus 544 v~aW~~w~~~g~~~~~~~~~~~d~l~~vv~r~~~~-~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~ 622 (801) |+|||||+|+|+++++|+...+|+||++|+|++++ ++|||..+.. ......+++||||+..+...... .....+. T Consensus 547 v~aW~r~~~~g~~~~~~~~~~~d~l~~vv~r~~~g~~ier~~~~~~--~~~~~~~~~~lD~~~~~~~~~~~--~~~~~~~ 622 (803) T protein:vir:70 547 QAAWHKWEWPLGTFIRGMFYSGEHLYLLIERGSTGVYLERMDMGDA--LVYNLNDRIRMDRQAELIFRHIK--AEDVWVS 622 (803) T ss_pred EEeEEEEEcCCCEEEEEEEecCCEEEEEEEECCCeEEEEEEecccc--cccCCcceeEeccceeEeecccc--CCceeee Confidence 99999999999999999988999999999999876 4677765443 23356788999998877653221 1111111 Q ss_pred ----eccccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCC Q lcl|Aclame:pro 623 ----ISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDG 698 (801) Q Consensus 623 ----~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g 698 (801) .....+.++.|.++.....+.+|.+..............-..+++++++++|+|||+|+++++++||+++.++ T Consensus 623 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~~~~~~~~a~~v~VGl~Y~~~~~~~~~~i~~~~--- 699 (803) T protein:vir:70 623 EPLPWQPTDVTLLDCVLIDGWDSYIGGSFLFSYNPGDNTLTTTFDMHDDDHVKAKVVVGQLYPQEFEPTQVVIRDNQ--- 699 (803) T ss_pred ecccccCcccceeeEEEeeeeeeecCCeEEEEEcCCCccceeeeeEECCCCcccEEEEeeeeeEEEeecceEEEcCC--- Confidence 1112345566666655555555554433222111122223467899999999999999999999999998443 Q ss_pred ceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCcc--cccccccccccccccccccccccccEEEEEEeecCceEEEEEE Q lcl|Aclame:pro 699 STATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSRE--FIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIE 776 (801) Q Consensus 699 ~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~ 776 (801) ......+|+||+|++|++++||+|.++|++..++ ..+...+++++...+..+.+++++|+++|||.+|+++.+|+|+ T Consensus 700 -~~~~~~~~~rl~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~s~~~~g~~~~~~g~~~~~tg~~~vP~~~~~~~~~v~i~ 778 (803) T protein:vir:70 700 -ERVSYIDVPTVGLVHLNLDKYPDFKVEVKNLKSGKVRNVLASNRVGGAINNIVGYVEPREGVFKFPLRSLSTDTVYRVM 778 (803) T ss_pred -CccccccccEEEEEEEEeecccceEEEEecCCccccceeeccchhccccccccCccccccceEEEEeeccCcceEEEEE Confidence 3456667889999999999999999999987775 3456889999999999999999999999999999999999999 Q ss_pred ECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 777 SDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 777 ~~~P~P~tvlsi~~eg~y~~r~rr~ 801 (801) +++|+||+|++|+|||+||+|+||| T Consensus 779 ~d~P~P~tvlsi~weg~y~~r~rrv 803 (803) T protein:vir:70 779 VESPHTFQLRDIEWEGSYNPTKRRV 803 (803) T ss_pred ECCCCCeEEEEEEEEEEEecccccC Confidence 9999999999999999999999999 No 12 >protein:vir:103341 Length: 806 # NCBI annotation: tail tubular protein B-like protein # Family: family:all:825 # MgeID: mge:1609 # MgeName: Era103 # Cross-refs: genbank:acc:YP_001039670;genbank:gi:125999999;genbank:GeneID:4818417 Probab=100.00 E-value=1.2e-216 Score=1204.27 Aligned_cols=775 Identities=24% Similarity=0.370 Sum_probs=680.1 Q ss_pred cceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEc-CCCcEEEEE Q lcl|Aclame:pro 2 ALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINR-DEFEQYFVV 80 (801) Q Consensus 2 a~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~-~~~~~y~l~ 80 (801) =+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||+.+.+.. ....++|.|+| ++.|+|+++ T Consensus 1 ~~v~~s~~nl~~GvSqQ~d~~R~~~q~~~~~N~~~~~~~Gl~rRPgt~~va~l~~~~--~~~~~~~~~~~~~~~~~y~v~ 78 (806) T protein:vir:10 1 MEVQGSYGRQLQGVSQQPIAVRLPGQVTSQLNAVPNVVDGLKTRMGSKHLARILNSL--DANSLIHHYKRGDDAEEYFVI 78 (806) T ss_pred CeeEeecchhccceeccChhHhhhhhhhhhhcceeccccccccCCchhhhhhhcCCC--CccceEEEEEecCCceEEEEE Confidence 489999999999999999999999999999999999999999999999999987643 34567888998 556799999 Q ss_pred EeCCeEEEEeC-CCeEEEEecCCc---cccc-CCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEec Q lcl|Aclame:pro 81 FTGEDIKVFDL-DGKEYQVRGDRS---YVRT-ANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVR 155 (801) Q Consensus 81 ~~~~~~rv~~~-~g~~~~v~~~~~---y~~t-~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 155 (801) |.++.+|||+. +|.++++.+.+. |+.+ .+++++|+++|+||+|||+|++++|+++.+.... ...+++++++ T Consensus 79 ~~~g~i~v~~~~~G~~~~v~~~~~~~~yl~~~~~~~~~l~~~tvaD~tfi~n~~~~~~~~~~~~~~----~~~~~~v~v~ 154 (806) T protein:vir:10 79 LQPGQVPVIFTVGGLACPVNTQGSAATYLSSSSLPRETTQLMTIGDYTFVLNRKMPVQARGDVTPS----LDNKGLVYVA 154 (806) T ss_pred EcCCcEEEEEcCCCcEEEecCCCceEEEeccCCCCcceeeEEEEcCEEEEecCcEeeeecccccCC----CCcceEEEEe Confidence 99999999995 898888776543 3332 3467899999999999999999999998876542 3457899999 Q ss_pred CCCccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCc Q lcl|Aclame:pro 156 GGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNND 235 (801) Q Consensus 156 ~g~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 235 (801) +++|+++|++++++..++.+++++++++........++++.++..++.+.. .....|.....+..++|.++.+ T Consensus 155 ~g~y~~~y~i~Ing~~~a~~~t~~~~~~~~~~~~~~~~~a~~l~~~l~~~~------~~~~~~~~~~~g~~~~i~~~~~- 227 (806) T protein:vir:10 155 YANFSFTYQILINGQVAAEHKTASSEDVKNEDLVRTDYVAGKLLENFNSRT------ASFPGFSMYQDGNVLVVDNSNG- 227 (806) T ss_pred ecccCceeeEEeccceEEEEEeccCCCcccccccchhHHHHHHHhhhcccc------cccceeEEEEcccEEEEecCCC- Confidence 999999999999999999999999999988889999999999988775432 2223466667777777777655 Q ss_pred eeEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEcc---CceeEEEeeccceeeEEec Q lcl|Aclame:pro 236 NVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDL---NRKVWVETIGWNTRTHLYY 312 (801) Q Consensus 236 ~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~---~~~~W~e~~~~~~~~~~~~ 312 (801) ..+.+++.+|..++.+.+++++++++++||..|++|+.++|+++.+...+.||++|+. +.++|+||++++...+++. T Consensus 228 ~~~~~~~~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~y~v~~~~~~~~~~~w~e~~~~~~~~~~~~ 307 (806) T protein:vir:10 228 ANYALTTVDGADGQDLVAIRHKVTNLDTLPNRAPVGYKVQVWPTGSKPESRYWLQAESQDGSKVTWVETIAPGVRKGWNA 307 (806) T ss_pred CccEEEEeeCCCCceeEEeecccCccccCccccCCCcEEEEeccCCCCCCceEEEEEeeccCceEEEeecccccccceec Confidence 4577889999999999999999999999999999999999999999999999999964 5678999999999999999 Q ss_pred CcceEEEEEec-----CCeEEeeccCcCccccCCcccccCccccC----CCceEEEEEcCeeEEecCCEEEEEecCCccc Q lcl|Aclame:pro 313 HTMPWALVRAS-----DGNFDFKVLEWGARTVGDDTTNPYPSFTG----QTINDIFFFRNRLGFLSGENIILSRTSKYFN 383 (801) Q Consensus 313 ~t~p~~lv~~~-----~~t~~~~~~~w~~~~~gd~~s~p~psf~g----~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~n 383 (801) ++||+.+++.+ +++|.++.++|++|.+|||++||.|||++ ++|++|+||||||+|++|++|||||+||||| T Consensus 308 ~t~p~~~v~~~~~~~~~~~~~~~~~~w~~r~~Gd~~tn~~psF~~~~~~~~it~v~f~q~RL~f~s~~~v~~Srsgd~~n 387 (806) T protein:vir:10 308 ATMPHVLVRESLNANGSANFTYRPGEWEDRDVGDDLTNDFPSLLNDSSPQPISSMLMVQNRLMLTSGEAVVASRTSRFFD 387 (806) T ss_pred cccceEEEeeeeeecccceeEEEecccccccccccccCccCcccCCCCCccceEEEEEeeeEEEecCCeEEEEccCCccc Confidence 99999999876 78999999999999999999999999997 6899999999999999999999999999999 Q ss_pred cccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCC Q lcl|Aclame:pro 384 FFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGR 463 (801) Q Consensus 384 F~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~ 463 (801) |+++|++++.|||||+++++++++|.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|+ T Consensus 388 F~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~t~~~q~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~ 467 (806) T protein:vir:10 388 FFRYTVLATVDTDPFDVFADIEEVYNIRWSAQMDGDVVLFTSDQQFTLPGDKPLTPTSAVIRPVTQFKMTPGVKPAPSGD 467 (806) T ss_pred CccccccCCCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCcEEEEeCCCcccceeEEEEEEEeecccCCCCceEeCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eEEEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCcee Q lcl|Aclame:pro 464 NVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIR 543 (801) Q Consensus 464 ~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~ 543 (801) +++|+|++|++++++||.+ ++.+|+|.+.|||+|++|||+|+++++++++++|.+++|++++||+|++|||||+++||+ T Consensus 468 ~v~Fv~~~g~~s~vre~~y-~~~~d~~~~~DlT~~~~hl~~g~~~~~~~~~~~~~~~~~~~~~dg~l~~~ty~~~~~e~~ 546 (806) T protein:vir:10 468 SILFAFDQGSYSGIREFFT-DSYSDTKKAQPATSHVDKYIRGKVLELSASSSFNRAFIITSPDRNILYVYDWLYEGTEKV 546 (806) T ss_pred eEEEeeCCCCeeEEEEEEe-eeeccceehhhHHHHHHHhcCCCeEEEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceE Confidence 9999999999999999985 556789999999999999999999999999999999999999999999999999999999 Q ss_pred EEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCC--CEEEEEEEEeecCCCC--CcCcceeeeeeeeEEeecccccccccc Q lcl|Aclame:pro 544 QQSWSHWDFGDNVTVFAAQVINSTMTVLMGNEH--AVWMGRLHFTKNSIDI--PGEPYRLYIDAKRKYTIPAGTYNDDTY 619 (801) Q Consensus 544 v~aW~~w~~~g~~~~~~~~~~~d~l~~vv~r~~--~~~~~r~~~~~~~~~~--~~~~~~~~lD~~~~~~~~~~t~~~~~~ 619 (801) |+|||||+|+|.+.+.|+...+|++|++|+|++ ++..++++|+++..+. .+..+.+||||+..+.+...+.... T Consensus 547 v~aW~rw~~~~~~~~~~~~~~~d~l~~vv~R~~~~~g~~~~~iE~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~-- 624 (806) T protein:vir:10 547 QNAWHKWSFPAGTVLHAVSYSNEKLYLVLTRTNTSGGVAGVYIEVMDMGDELEYGLQDRVRMDRRATLSMTYNATTRV-- 624 (806) T ss_pred EEeEEeeeeCCCeEEEEEEEecCeEEEEEEEcCCcccEEEEEEEeecCCCCCCcccceeeeccccceEEEeccccccc-- Confidence 999999999999888888888999999999987 6777888888876433 3456788999998887654332221 Q ss_pred ceeeccccccCcccccceEEEEecCCccccc----eeeccccccCcEEEEcC---cccCceEEEEEeeeEEEEeCCeeEE Q lcl|Aclame:pro 620 QTSISLATIYGMNFTKGRVSVVFPDGKIIEV----DQPINGWSSDPVLRLDG---NQEGQVVYIGFNIPFTYTFSKFLIK 692 (801) Q Consensus 620 ~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~----~~~~~g~~~~~~~~i~~---~~~~~~v~vGl~y~~~~~~~~~~~~ 692 (801) ++...+.++.|++++.+.+.+||..+.. ....++. ..++++.+ +..+.+|+|||+|+++++++||+++ T Consensus 625 ---~~~~~l~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~--~~~v~~~~~~~~~~~~~v~vGl~Y~s~~~~t~p~~~ 699 (806) T protein:vir:10 625 ---WTSSALPWLPQDLSSLDAVLVSGWAGYVGGAFQFSYNAS--NNTISTNFDLAEGNTATIVVGETYWYEVEPTPPLIK 699 (806) T ss_pred ---eeeeeeccccccccceeEEEEeeccccCCceEEEEEcCc--cceEeeeeeecCCCCcEEEEeeeeeEEEEECCeeEe Confidence 1223466889999999999998865422 1222222 12222222 4568899999999999999999997 Q ss_pred ecCCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCc--ccccccccccccccccccccccccccEEEEEEeecCce Q lcl|Aclame:pro 693 KTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSR--EFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQT 770 (801) Q Consensus 693 ~~~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~ 770 (801) .+. ......+|+||+|+.+++.+||+|.+.|.+.++ +..+.+.+++.+...+..+.|+.++|+++|||.+|+++ T Consensus 700 ~~~----~~~~~~~r~~l~r~~~~~~~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~~~~~~ 775 (806) T protein:vir:10 700 DSK----DRVSYLDTPTVGNVYLNLDMYPDFSVVVTDKETLQERTVYLANKTAGSITNVIGYIAPHEGTLRIPLRRKSTD 775 (806) T ss_pred ccC----CCccccccEEEEEEEEEeecceeeEEEEcccCCCcceeeeccCcccccccccccccccccceEEEEeeecCce Confidence 432 234556899999999999999999999987765 45677899999999999999999999999999999999 Q ss_pred EEEEEEECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 771 NLVTIESDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 771 ~~v~i~~~~P~P~tvlsi~~eg~y~~r~rr~ 801 (801) .+|+|+|++|+||+|+||+|||+||+|+||| T Consensus 776 ~~v~i~~d~P~P~tvlai~~eg~y~~r~~rv 806 (806) T protein:vir:10 776 VSFKIRSKSPATFQLRDIEWTGSYNPRKRRV 806 (806) T ss_pred eEEEEEECCCCceEEEEEEEEEEeecccccC Confidence 9999999999999999999999999999999 No 13 >protein:vir:80253 Length: 777 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1879 # MgeName: LKA1 # Cross-refs: genbank:acc:YP_001522886;genbank:gi:158345179;genbank:GeneID:5687516 Probab=100.00 E-value=1.9e-214 Score=1192.33 Aligned_cols=768 Identities=21% Similarity=0.308 Sum_probs=659.3 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~ 80 (801) ||+|+++||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++++......++++++.++++++|+|+ T Consensus 1 M~~i~~~~~nf~~GvS~q~D~~ry~~q~~~~~N~~~~~~gG~~rRpGt~fv~~l~~~~~~~~~~~~~~~~~~~e~~~~l~ 80 (777) T protein:vir:80 1 MSYFAGSYRQLLFGVSQQTAKDRLEGQVESQLNMQSDLVTGPRRRSPVHLIADAMAATDANRLAYSLATFSGREVLLLVD 80 (777) T ss_pred CceeeeecchhhcccccCCchHHhhhHHhhhhcceeeeccCceeCcchHhhhhhcCCCcccceeEEEEecCCCeeEEEEE Confidence 99999999999999999999999999999999999999999999999999999998877777778777777788899999 Q ss_pred EeCCeEEEEeCCCeEEEEecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCCCcc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) +++++||||++.|..+.+.+..+|+.+ .+.++|+|+|+||+|||+|++++|+++.+.++...+.+..++++++++++|+ T Consensus 81 ~g~g~irv~~~~~g~~~~~~~~~Yl~a-~~~~~l~~~q~aD~~fi~n~~~~p~~~~~~~~~~~~~~~~~~~~~v~~~~~g 159 (777) T protein:vir:80 81 TLDGTLTILDDATGEVLFTGTNSYLTA-GTGRSIRFAALDDSVFVANTEVIPQTQLWSGASAYPDPTRAGYLYVVAGAFS 159 (777) T ss_pred ecCCeEEEEECCCCeEEEecCCCceee-ccccceeEEEEcCEEEEEeCCccceeeecccCCCccCcccceEEEeeccCCC Confidence 999999999997777777888889754 4567899999999999999999999999998888788888999999999999 Q ss_pred ceEEEEeCCceeE-eeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCceeEE Q lcl|Aclame:pro 161 RRLSIEFNGAERA-AVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWG 239 (801) Q Consensus 161 ~~y~vti~~~~ta-~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t 239 (801) ++|+|.+++...+ .++.+..+........+..+++.+|...+.+ ........+|.+...+..+++.++++. . T Consensus 160 ~~y~i~i~~~~~~~~~t~~~~t~~~~~~~~~~~~ia~~L~~~~~~----~~~~~s~~~~~~~~~g~~~~i~~~~~~---~ 232 (777) T protein:vir:80 160 KQYRLSITNQVTGVTTSVDVTTSATEASQATGEYVITQLRTAAEA----DATIGTAAGFAYYQDGAYLYVTAPEAI---A 232 (777) T ss_pred ceeeEeecCCcCceeEEEecCCcccccccccchhhhhhhhhhhcc----ccceeecCceEEEeCCcEEEEEecCce---e Confidence 9999999875443 4444455556666777778888887655433 334455567899999999999877653 3 Q ss_pred EEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEE Q lcl|Aclame:pro 240 LQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWAL 319 (801) Q Consensus 240 ~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~l 319 (801) +++. ++.+..+......+.+.++||+.++.++.+++.++.++ .++||++|+..+++|+||++++...++ ++||+.| T Consensus 233 ~t~~-~g~~~~~~~~~~~v~~~~~lp~~~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~w~e~~~~~~~~~~--~t~p~~l 308 (777) T protein:vir:80 233 VSTD-SGSNFLRASNAASIRDAAELPAKLPADADGFIIATGAA-KNKTYFRWVDLERKWDEDASRGAQAEL--IDMPLRI 308 (777) T ss_pred EecC-CcCccceeeeeEEEeeccccccccccccceEEEeCCCC-CCceEEEEEccCcEEEEeecccccccc--cccceEE Confidence 4443 45566777888899999999999999998888876554 478999999999999999999988776 5999999 Q ss_pred EEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCccEE Q lcl|Aclame:pro 320 VRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPID 399 (801) Q Consensus 320 v~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~ 399 (801) ++.+ ++|+++.++|++|.+||+++||.|||+|++|++|+||||||+|++|++|||||+||||||++++++++.|||||+ T Consensus 309 ~~~~-~~~~~~~~~w~~r~~gd~~tn~~Psf~g~~i~~v~f~q~RL~f~~~~~v~~Srtgd~~nF~~~s~~~~~DdDpI~ 387 (777) T protein:vir:80 309 TYSA-PNFSLTALNYERRASGDATSNPALKFTEQGISGMTTMQGRLVLLAGEYVCMSASGNPLRWFRASVSTQSDDDPIE 387 (777) T ss_pred EecC-CceEeeccCCccccccccccCCCceecCCceeEEEEEcceeeeecCCeEEEEeccCccccccccccCCCCCccEE Confidence 9876 589999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCCeEEEEEc-CCCeEEEE Q lcl|Aclame:pro 400 VAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASP-RASFTSIN 478 (801) Q Consensus 400 ~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~-~g~~~~v~ 478 (801) +++++++++.|+|+++++++|+|||+++||+|+++++|||+|++++++|+|+|+++|+|+.+|++++|+++ .|++++++ T Consensus 388 ~~~ss~~~~~i~~~v~~~~~L~i~T~~~e~~l~~~~~lTP~~~~~~~~s~~~~~~~~~Pv~vG~~v~Fv~~r~g~~s~v~ 467 (777) T protein:vir:80 388 VAATAPVASPYEYAVAFNKDLVLFAKTHQGLVPGANLLTSRNATAAVVTEYSFQNSCSPVVAGRTVFFASPRSGPWSAVW 467 (777) T ss_pred EEEcCCcceeeeeeeecCCcEEEEecCceEEEeCCCcccceeEEEEEEEeeccCCCCCceEeCCeEEEEecCCCceeEEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999975 56789999 Q ss_pred EEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeEE Q lcl|Aclame:pro 479 RYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTV 558 (801) Q Consensus 479 ~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~~ 558 (801) ||++.++.+++|+++|||+|++|||++++.+++++++|+.++ |++++||+|++|||||+++||+|+|||||+|+|.+++ T Consensus 468 e~~~~~~~~d~y~a~Dlt~~~~hl~~~~v~~~a~s~~p~~v~-~~~~~dg~l~~~ty~~~~~e~~v~aW~r~~~~g~v~~ 546 (777) T protein:vir:80 468 EMLPSQYTDAQVEASDSTSHLPKYIAGPVRFLATSSTTSIVV-VGTSNLRELVVHEYLWQGGEKVHAAWHKWSFPQDITG 546 (777) T ss_pred eeeecccccCceehhHHHHHHHHhcCCceEEEEEcCCCceEE-EEEcCCCeEEEEEEeecCCceEEEeeEEeccCCcEEE Confidence 999888888999999999999999999999999888877765 6677889999999999999999999999999999998 Q ss_pred EEEEEcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccccc-e Q lcl|Aclame:pro 559 FAAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKG-R 637 (801) Q Consensus 559 ~~~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g-~ 637 (801) +|+ .+|+||++|+|++..++|||..+... +. ..+..+||||+.. ++.++++.+..+. .+++|+++ . T Consensus 547 v~~--i~d~l~~iv~r~~~~~le~~~~~~~~-d~-~~~~~~~~D~~~~---~~~~~~~~~~~~~------~~~~~~~~~~ 613 (777) T protein:vir:80 547 AYF--RGDRLILLFHVAGRVILGELFMQRLG-DA-QSIPGGFLDLYRV---GAANADEEVAIPA------FAADLYPEDS 613 (777) T ss_pred EEE--ECCEEEEEEEcCCeEEEEEEeeccCC-CC-cccceeeeeeeee---eeeeeCCccceeE------eeccccCCcc Confidence 887 48999999999999999998655443 22 2334689999643 2334444433332 34444443 3 Q ss_pred EEEEecCCccccc-----eeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEE Q lcl|Aclame:pro 638 VSVVFPDGKIIEV-----DQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRR 712 (801) Q Consensus 638 ~v~~~~dG~~~~~-----~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~ 712 (801) ...+..+|..... .+..++ ....+++++++++++|+|||+|+++++|+||+++.++ | .....+|+|||| T Consensus 614 ~~~v~~~~~~~~~~~~~~~v~~~~--~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~--g--~~~~~~r~~i~r 687 (777) T protein:vir:80 614 TFAYKLSGEFQSLGQRCGDRRVDG--ATVYIKVVGAQAGDQYRIGLRYLSKLGPTRPILRDPN--G--VPITTERTQLHR 687 (777) T ss_pred eeEEEecCcccccceeeeeEEeCC--ceeeEEEcCCCCCCEEEEeeeeEEEEEeCceEEeCCC--C--ceeeecCeEEEE Confidence 3334344432211 111222 2345789999999999999999999999999998543 3 345568999999 Q ss_pred EEEEeeccccEEEEeCCCCcc-cccccccccccccccccccccccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEE Q lcl|Aclame:pro 713 AWVNYEDSGAFTIRVNNLSRE-FIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWE 791 (801) Q Consensus 713 ~~v~~~~tg~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~e 791 (801) ++|+|++||+|.++|++.+++ .++.+.+.+++.+.+..+.|++++|+++||+.+|+++.+|+|++++|+||+|+||+|| T Consensus 688 ~~~~~~~sg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tg~~~vp~~~~~~~~~v~i~~d~P~P~tilsi~~e 767 (777) T protein:vir:80 688 LTWSLDSTGEVTFRVADQARGESAYTTTPLRLYSRDLGAGLPLAATATLDTPARVDMQTAQFSLETDDYYDMNITSLEYG 767 (777) T ss_pred EEEEeeccccEEEEEcCCCCcceeeeecCceecccccccccccccceEEEEEEeecCcceEEEEEECCCCceEEEEEEEE Confidence 999999999999999888774 6788899999999999999999999999999999999999999999999999999999 Q ss_pred EEEeccccCC Q lcl|Aclame:pro 792 GNYLRRSSGI 801 (801) Q Consensus 792 g~y~~r~rr~ 801 (801) |+||+|+||= T Consensus 768 ~~y~~r~~r~ 777 (777) T protein:vir:80 768 FRYNQRYRRQ 777 (777) T ss_pred EEeecccccC Confidence 9999996666 No 14 >protein:vir:6326 Length: 826 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:132 # MgeName: phiKMV # Cross-refs: genbank:acc:NP_877473;genbank:gi:33300845;uniprot:Q7Y2D1;genbank:GeneID:1482615 Probab=100.00 E-value=3.9e-214 Score=1190.57 Aligned_cols=776 Identities=21% Similarity=0.294 Sum_probs=639.2 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCc-EEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFE-QYFV 79 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~-~y~l 79 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||++++.++....++++|.++||+.+ +||+ T Consensus 1 M~~i~~s~~n~~~GvSqq~d~~r~~~q~~~~~N~~~~~~~G~~rRpg~~~v~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 80 (826) T protein:vir:63 1 MSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLV 80 (826) T ss_pred CceeeeecchhhcceeccCchHhhhhhhhhhhcceeeccCCcccCchhHhhhhhccCCccccccEEEEEecCCCceEEEE Confidence 999999999999999999999999999999999999999999999999999999988777889999999998666 6888 Q ss_pred EEeCCeEEEEeCC-CeEEEEecC-CcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCC Q lcl|Aclame:pro 80 VFTGEDIKVFDLD-GKEYQVRGD-RSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGG 157 (801) Q Consensus 80 ~~~~~~~rv~~~~-g~~~~v~~~-~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 157 (801) +|++|+||||+++ |..+.+.+. .+|+ ++++.++|+++|+||+|||+|++++|++..+... ...+..+++++++++ T Consensus 81 ~~~~g~irv~~~~~g~~~~~~~~~~~y~-~~~~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~~--~~~~~~~~~~~v~~g 157 (826) T protein:vir:63 81 AQHRGELYLFDERDGRLLMGQPLVHDYL-KANDYRQLRAATVADDLFIANLSVKPEADRTDIK--GVDPNKAGWLYIKAG 157 (826) T ss_pred EecCCcEEEEEcCCCeEEEcCCCCCcee-eecCccceEEEEeCCEEEEEeCCeeeeecccccc--ccCCCCcEEEEeecc Confidence 9999999999975 555555543 4454 5678899999999999999999999998665432 234567899999999 Q ss_pred CccceEEEEeCCc---------eeEeeeeeccccccc-----ceeechHHHHHHHHhhhhhcccc---------eeeeee Q lcl|Aclame:pro 158 QYGRRLSIEFNGA---------ERAAVQLPDGSQPAH-----VNEVDGQAIAEKLAAQLRNNLGN---------PNNDQD 214 (801) Q Consensus 158 ~y~~~y~vti~~~---------~ta~~~tp~~s~~~~-----~~~~~~~~ia~~l~~~~~a~~~~---------~~~~~~ 214 (801) +|+++|+|++++. .+++++++.+..... ....+..+++..+...+.+...- ...... T Consensus 158 ~Y~~~y~vti~~~~~~~gt~~s~t~t~~t~~~~~a~~~~~~~~~~~s~~yia~~l~~~~~a~~~~~~~~~t~~~~~~~~~ 237 (826) T protein:vir:63 158 QYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPD 237 (826) T ss_pred ccCceEEEEEEeccccCCccccceEEEEeccCCcccccccccceeeeeeeeeeeceeeeeeccccccCCCccccceecCC Confidence 9999999999752 345667766543221 12234445554443322111000 000000 Q ss_pred -----ccce--EEEECCceEEEEeCCCceeEEEEeecCCCccceeeeeeecccceeccceeeCC----eEE----Eeecc Q lcl|Aclame:pro 215 -----PNKW--RFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDG----YIV----KIVGD 279 (801) Q Consensus 215 -----~~~~--~~~~~~~~~~i~~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g----~~v----~i~~~ 279 (801) ..++ ......+.+++...+..+ ..+ +.++++...+......++++.+||+.++++ +.+ .+... T Consensus 238 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~ 315 (826) T protein:vir:63 238 ANAATIAGYLNQRGVQDGYIAFRGDADIH-VEV-STDMGNNYGIASGGMSLNATADLPALLPGVGAPGVGVQFMDGAVMA 315 (826) T ss_pred cccceeecceeEecccccEEEEeeCCccc-EEE-ccCCCCcceEEEEEeeccceeeccccCCCcccceEEEeeEEeEEec Confidence 0011 111122333333332211 122 233445556777888999999999887764 332 23445 Q ss_pred CCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEEE-EecCCeEEeeccCcCccccCCcccccCccccCCCceEE Q lcl|Aclame:pro 280 TSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALV-RASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDI 358 (801) Q Consensus 280 ~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv-~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v 358 (801) .+...++||++|+...++|+||++|+.. +..++|||.|+ +.++++|+++.++|++|.+||+++||.|||+|+||++| T Consensus 316 ~g~~~d~~y~~~~~~~~~w~e~~~~~~~--~~~~tmp~~l~~~~~~~~f~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v 393 (826) T protein:vir:63 316 TGSTKAPVYFEWDSANRRWAERAAYGTD--WVLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFVTRGITGM 393 (826) T ss_pred CCCcccceEEEEEcCCceEEEEeecCcc--cccccceEEEEEeccCCeEEEeccccccccccccccCCCccccCCCceEE Confidence 6677789999999999999999999975 45579999998 56889999999999999999999999999999999999 Q ss_pred EEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCcccc Q lcl|Aclame:pro 359 FFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILS 438 (801) Q Consensus 359 ~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lT 438 (801) +||||||+|++|++|||||+||||||+++++.++.|||||++++++++++.|+|+++++++|+|||+++||+|+++++|| T Consensus 394 ~f~q~RL~f~~~~~v~~Srtgd~~nF~~~s~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~~~q~~ls~~~~lT 473 (826) T protein:vir:63 394 TTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVT 473 (826) T ss_pred EEEeceEEEeeCCeEEEEccCCccccccccccCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCcEEEEeCCCccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceEEEEEeeeccccCCCcEEeCCeEEEEEcCC-CeEEEEEEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCC Q lcl|Aclame:pro 439 SRSVELNLTTQFDVQDRARPHGVGRNVYFASPRA-SFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAEN 517 (801) Q Consensus 439 P~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g-~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~ 517 (801) |+|++++++|+|+|+++|+|+.+|+.++|+|++| +|++++||+|..+.++.|+++|||+|++|||++++.+++++++|+ T Consensus 474 P~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~s~v~e~~~~~d~~~~y~~~dlt~~~~~l~~~~v~~~a~s~~~~ 553 (826) T protein:vir:63 474 PRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSG 553 (826) T ss_pred ceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeeccccceehhHHHHHHHHhcCCCeEEEEEcCCCC Confidence 9999999999999999999999999999999887 689999999888887789999999999999999999999988887 Q ss_pred eEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEE-EEeecC---CCCC Q lcl|Aclame:pro 518 FAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMGNEHAVWMGRL-HFTKNS---IDIP 593 (801) Q Consensus 518 ~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d~l~~vv~r~~~~~~~r~-~~~~~~---~~~~ 593 (801) .++ |++++||+|++|+|||+++||+|+|||||+|+|.|+++|+. +|+||++|+|+++++++|| .|++++ .+.+ T Consensus 554 ~v~-~~~~~dg~l~~~~y~~~~~e~~v~aW~~~~~~g~v~~~~~i--~d~l~~iv~r~~~~~~~r~~~e~~~~~~~~~~~ 630 (826) T protein:vir:63 554 YLV-FGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFT--GDNLMVLIQKGQEIALGRMHLNSLPAREGLQYP 630 (826) T ss_pred EEE-EEEcCCCEEEEEEEeeCCCcEEEEeEEEEecCCcEEEEEEE--CCeEEEEEEeCCCEEEEEEEEEecCCccccccC Confidence 765 67888999999999999999999999999999999888775 8999999999999999998 567654 3445 Q ss_pred cCcceeeeeeeeEEeeccccccccccceeeccccccCcccccceEEEEecCCccccceeecccc-ccCcEEEEcCcccCc Q lcl|Aclame:pro 594 GEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGW-SSDPVLRLDGNQEGQ 672 (801) Q Consensus 594 ~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~-~~~~~~~i~~~~~~~ 672 (801) ..++.+++||...+..... ... ...+++|+++..+.+.+||.+.......... .+..++++++++.+. T Consensus 631 ~~d~~~~~d~~~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~l~~~~~~~~~ 699 (826) T protein:vir:63 631 KYDYWRRIEATVAGELELT-------KQH----WDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGA 699 (826) T ss_pred CccceEEEEEeeeeeeccC-------cce----eecccCcccccEEEEeeCccccCCccceEEecCCEEEEecCCCcccc Confidence 5677888998765543211 111 1237899999999999999876543222111 122267889999999 Q ss_pred eEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCcc--ccccccccccccccccc Q lcl|Aclame:pro 673 VVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSRE--FIYTMAGARLGSDNLRV 750 (801) Q Consensus 673 ~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~ 750 (801) +|+|||+|+++++++||+++.+++++ ...+|+||||++|++.+||+|.++|++..++ ..+.+.+.+++...+.. T Consensus 700 ~v~VGl~y~s~~~~~~~~~~~~~g~~----~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (826) T protein:vir:63 700 VYVVGCEFWSKVEFTPPVLRDHNGLP----MTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNA 775 (826) T ss_pred EEEEeeeeeEEEEecceEEEccCCCc----ceeccEEEEEEEEEeeccccEEEEecCccccceeEeecCCceeccccccc Confidence 99999999999999999999766553 4458999999999999999999999988775 45678889999999999 Q ss_pred ccccccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 751 GRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 751 ~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~rr~ 801 (801) +.|+..++++++||.+++++.+|+|+|+.|+||+|++|+|||+||+|+||| T Consensus 776 g~p~~~t~~~~vP~~~~~~~~~i~i~~d~P~p~~il~i~~~~~yn~r~rrv 826 (826) T protein:vir:63 776 GEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV 826 (826) T ss_pred ccccccceEEEEEEeeccceEEEEEEeCCCCcEEEEEEEEEEEEeceeecC Confidence 999999999999999999999999999999999999999999999999999 No 15 >protein:vir:78957 Length: 826 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1860 # MgeName: LKD16 # Cross-refs: genbank:acc:YP_001522826;genbank:gi:158345061;genbank:GeneID:5687447 Probab=100.00 E-value=4.8e-211 Score=1173.65 Aligned_cols=779 Identities=22% Similarity=0.292 Sum_probs=627.6 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCc-EEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFE-QYFV 79 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~-~y~l 79 (801) ||+|+|+||||++|||||+|++||++||++|+||+|+|+|||+||||++||+++++++....++++|.++||++| +|+| T Consensus 1 M~~i~~~~~nl~gGvSqq~d~~r~~~q~~~~~N~~~~~~gG~~rRpgt~~va~~~~~~~~~~~~f~~~~~r~s~e~~~~l 80 (826) T protein:vir:78 1 MSYKQSAYPNLLMGVSQQVAFERLPGQLSEQINMVSDPVSGLRRRSGIELMASLLHTDQPWPRPYLYHTNLGGRSIAMLV 80 (826) T ss_pred CcceeeecchhccceecccchHhhhhhhhhhhcceeccccccccCCchHhhhhhccCCcCCceeEEEEeccCCcceEEEE Confidence 999999999999999999999999999999999999999999999999999999988877888899999998766 6888 Q ss_pred EEeCCeEEEEeC-CCeEEEEec-CCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCC Q lcl|Aclame:pro 80 VFTGEDIKVFDL-DGKEYQVRG-DRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGG 157 (801) Q Consensus 80 ~~~~~~~rv~~~-~g~~~~v~~-~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 157 (801) +|++|+||||++ +|..+.+.. ..+|+.++ +.++|+++|+||+|||+|++++|++..... ...++..+++++++++ T Consensus 81 ~~~~g~irv~~~~~g~~~~~~~~~~~y~~~~-~~~~l~~~t~aD~~fi~n~~~~p~~~~~~~--~~~~~~~~~~~~v~~g 157 (826) T protein:vir:78 81 AQHRGELYLFDEKDGRLLMGQPLVHDYLKAS-DYRQLRAATVADDLFIANLEVRPEADKADV--LGVDPSKTGWLYIKAG 157 (826) T ss_pred EEcCCcEEEEECCCCEEEEecCcccceeecC-CcceeEEEEEcCEEEEEcCcEeeeeccccc--cCCCCCceEEEEeccc Confidence 999999999986 555444433 34566554 567899999999999999999998754322 2345677899999999 Q ss_pred CccceEEEEeCCc---------eeEeeeeeccccc-----ccceeechHHHHHHHHhhhhhcccceeeee---------- Q lcl|Aclame:pro 158 QYGRRLSIEFNGA---------ERAAVQLPDGSQP-----AHVNEVDGQAIAEKLAAQLRNNLGNPNNDQ---------- 213 (801) Q Consensus 158 ~y~~~y~vti~~~---------~ta~~~tp~~s~~-----~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~---------- 213 (801) +|+++|+|++++. .++++.+++++.. ......+..+++..+.....+......... T Consensus 158 ~y~~~y~v~i~~~~~~~~~~~s~t~~y~t~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~t~~~~~~~~~ 237 (826) T protein:vir:78 158 QYSKAFSLTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLFGKFFGAPEYTLPNSTKKYPKVDPD 237 (826) T ss_pred ccCceeEEEeccceeecccccceeEEEEeccCCccccccccccceecchhhheecceeeccccceeeeccceeEeecccc Confidence 9999999999862 3466777766543 233344556666665543222111111000 Q ss_pred ----eccceEE--EECCceEEEEeCCCceeEEEEeecCCCccceeeeeeecccceeccceee----CCeEEE----eecc Q lcl|Aclame:pro 214 ----DPNKWRF--NVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAP----DGYIVK----IVGD 279 (801) Q Consensus 214 ----~~~~~~~--~~~~~~~~i~~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~----~g~~v~----i~~~ 279 (801) ...+... .....++++.+.++.. .. .+.+++++..+......++++.+||+..+ +|+++. +... T Consensus 238 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~g~~~~~~~~~~~v~~~~~l~a~~p~~~~~~~~~~~~~~~~~~ 315 (826) T protein:vir:78 238 PAAATVAGYLNQRGVQDGYIAFRGDGDIV-VE-VSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGTGVQFMDGAIMA 315 (826) T ss_pred ccceeeccceeecccccceEEEecCCCeE-EE-eccCCCccceEEEeeEEEecccceeeeecccccceEEEEEEeeeEec Confidence 0000000 1112334444433221 22 23345555566777778888888765554 555544 3444 Q ss_pred CCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEEEE-ecCCeEEeeccCcCccccCCcccccCccccCCCceEE Q lcl|Aclame:pro 280 TSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALVR-ASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDI 358 (801) Q Consensus 280 ~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv~-~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v 358 (801) .+...++||++|+..++.|+||++||.. ++.++|||.|++ .++++|+++..+|++|.+||+++||.|||+|++|++| T Consensus 316 ~g~~~~~~y~~~~~~~~~w~e~a~~g~~--~~~~tmp~~l~~~~~~~~f~~~~~~w~~r~~gd~~tnp~psf~g~~i~~v 393 (826) T protein:vir:78 316 TGSTKAPVYFAWDAANRRWAERAAYGTD--WVLKKMPLALRWDESTDTYSLNELEYDRRGSGDEETNPTFNFVKRGITGM 393 (826) T ss_pred CCCcccceeEEEEcCCceEEEeeccCcc--cccccccEEEEEecCCCeEEEeeccccccccCcccccCcccccCCCceEE Confidence 5677889999999999999999999964 677899999984 5789999999999999999999999999999999999 Q ss_pred EEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCcccc Q lcl|Aclame:pro 359 FFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILS 438 (801) Q Consensus 359 ~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~lT 438 (801) +||||||+|++|++|||||+||||||++++++++.|||||++++++++++.|+|+++++++|+|||+++||+|+++++|| T Consensus 394 ~f~q~RL~f~~~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~~s~~~~~i~~~v~~~~~L~l~T~~~e~~l~~~~~lT 473 (826) T protein:vir:78 394 TTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVT 473 (826) T ss_pred EEEeceEEEeeCCeEEEEeccCccccccccccCCCCCCcEEEEEccCcceeEEEEEecCCcEEEEecCcEEEEeCCCccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ccceEEEEEeeeccccCCCcEEeCCeEEEEEcCC-CeEEEEEEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCC Q lcl|Aclame:pro 439 SRSVELNLTTQFDVQDRARPHGVGRNVYFASPRA-SFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAEN 517 (801) Q Consensus 439 P~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g-~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~ 517 (801) |+|++++++|+|+|+++|+|+.+|++++|++++| .|++++||+|..+.++.|+++|||+|++|||++++.+++++++|+ T Consensus 474 P~~~~~~~~s~~~~~~~~~Pv~vG~~v~F~~~r~~~~s~v~e~~~~~~~~~~y~~~dlt~~~~~l~~~~v~~~a~s~~~~ 553 (826) T protein:vir:78 474 PRTAVISITTQYDVDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSG 553 (826) T ss_pred ceeEEEEEEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeecccCccchHHHHHHHHHhcCCCeEEEEEeCCCC Confidence 9999999999999999999999999999998887 589999999888887789999999999999999999999999888 Q ss_pred eEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEE-EeecCCCCCcC- Q lcl|Aclame:pro 518 FAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMGNEHAVWMGRLH-FTKNSIDIPGE- 595 (801) Q Consensus 518 ~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d~l~~vv~r~~~~~~~r~~-~~~~~~~~~~~- 595 (801) .++ |++++||+|++|||||+++||+|+|||||+|+|.|+++|+. +|+||++|+|+++++++||. ++++.....+. T Consensus 554 ~~v-~~~~~~g~l~~~ty~~~~~e~~v~aW~~~~~~g~v~~v~~i--~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~ 630 (826) T protein:vir:78 554 YLV-FGTSAADEMICHQYLWQGNEKVQNAYHRWTLRHQIIGAYFT--GDNLMVLIQKGQEIALGRMHLNSLPAREGLQYP 630 (826) T ss_pred eEE-EEEcCCCeEEEEEEEecCCcEEEEeEEEEccCCcEEEEEEE--CCeEEEEEEeCCCEEEEEEEEEecCCCcccccc Confidence 764 78889999999999999999999999999999999988764 89999999999999999995 44443221111 Q ss_pred cceeeeeeeeEEeeccccccccccceeeccccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEE Q lcl|Aclame:pro 596 PYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVY 675 (801) Q Consensus 596 ~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~ 675 (801) ...++.++...+... .+. +......+....++.|++|+.+.+.+++.+.... .+.+.+++++++++.+++|+ T Consensus 631 ~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~v~ 702 (826) T protein:vir:78 631 KYDYWRRIEATVDGE-LEL---TKQHWDLIKDGAAVYQLQPQVGAYMERYQLGVKR----ETSTKVFLDVPEAVVGSVYV 702 (826) T ss_pred ccceeEEEEEEEcce-ecc---ccceeEEecCCceeeeeccceeeeccccceeccc----cCCCceEEEeCCCccccEEE Confidence 222344443333211 011 1111112233456778999888877777654322 23344678999999999999 Q ss_pred EEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCccc--ccccccccccccccccccc Q lcl|Aclame:pro 676 IGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREF--IYTMAGARLGSDNLRVGRS 753 (801) Q Consensus 676 vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~ 753 (801) |||+|+++++++||+++.++++ ....+|+||||++|++.+||.|.+.|++..++. .++..+.++....+..+.| T Consensus 703 VGl~y~s~~~~~~~~~~~~~g~----~~~~~r~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 778 (826) T protein:vir:78 703 VGCEFWSKVEFTPPVLRDHNGL----PMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLSSRQLNAGEP 778 (826) T ss_pred EeeceeEEEEeCceEEecCCCc----ceeecceEEEEEEEEeeccccEEEEeCCCccCcceeeeecccccccccccCCcc Confidence 9999999999999999966543 456689999999999999999999999888764 3455566677777778888 Q ss_pred cccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 754 NIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 754 ~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~rr~ 801 (801) +..++++++|+.+++++.+|+|+++.|+||+|++|+|||+||+|+||| T Consensus 779 ~~~t~~v~vp~~~~~~~~~i~i~~d~P~P~tvlai~~~~~y~~r~rrv 826 (826) T protein:vir:78 779 LVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV 826 (826) T ss_pred cccceEEEEeeeccCceEEEEEEeCCCCcEEEEEEeEEEEecceeecC Confidence 889999999999999999999999999999999999999999999999 No 16 >protein:vir:100022 Length: 976 # NCBI annotation: T7-like tail tubular protein B # Family: family:all:825 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214208;genbank:gi:61806431;genbank:GeneID:3294702 Probab=100.00 E-value=2.5e-209 Score=1164.22 Aligned_cols=772 Identities=23% Similarity=0.374 Sum_probs=642.7 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCcccc----ccEEEEEEcCCCcE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGA----QPYVHLINRDEFEQ 76 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~----~~~~~~~~~~~~~~ 76 (801) ||+|+|+||||++|||||||.+|+|||+++|+||+|||+.||+||||++||+.|.++..... ..+||.++||++|+ T Consensus 1 M~~v~~si~nl~~GvSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRp~~~~v~~l~~~~~~~~~~~~~~~~~~~~r~~~e~ 80 (976) T protein:vir:10 1 MASVTQTIPTLTGGLSQQPDELKIPGQVSVANNVIPDVTHGLLKRPGGKLVASISDNGTAALNSQTNGKWFSYYRDETES 80 (976) T ss_pred CcceeecchhhhCcceecchhhcCCchhhhhhccccccccccccCCcceeeeeecCCCcccccccccceEEEEEcCCCcE Confidence 99999999999999999999999999999999999999999999999999999987654433 46789999999999 Q ss_pred EEEEEe-CCeEEEEeC-CCeEEEEecCCc-------ccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCC Q lcl|Aclame:pro 77 YFVVFT-GEDIKVFDL-DGKEYQVRGDRS-------YVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQ 147 (801) Q Consensus 77 y~l~~~-~~~~rv~~~-~g~~~~v~~~~~-------y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~ 147 (801) |++.+. +|.++|||+ +|++++|++... |+ ++++.++|++++++|++||+|+++.|++.....+ ... T Consensus 81 y~~~~~~~g~~~v~~~~~G~~~~v~~~~~~~~~~~~yl-~~~~~~~~~~~tv~d~tfi~N~~~~~~~~~~~~~----~~~ 155 (976) T protein:vir:10 81 YIGQVSRSGDINMWRCSDGQAMTVNYDSGTATALTTYL-THTNDEDIQTLTLNDYTFLTNRTKTVAMSSTVEP----VRP 155 (976) T ss_pred EEEEEecCCceEEEEccCCeEEEEEcCCCcccccchhh-ccCCcceeEEEEEccEEEEecCceEEeecccccC----CCC Confidence 999997 568999998 799999986543 33 4578899999999999999999999987655433 345 Q ss_pred ccEEEEecCCCccceEEEEeCCceeE---eeeeecccc----ccc----------------------------------- Q lcl|Aclame:pro 148 GDALINVRGGQYGRRLSIEFNGAERA---AVQLPDGSQ----PAH----------------------------------- 185 (801) Q Consensus 148 ~~~~~~v~~g~y~~~y~vti~~~~ta---~~~tp~~s~----~~~----------------------------------- 185 (801) +.+++++++++|+++|+|+|++..++ ++.++.... +.. T Consensus 156 ~~~~~~v~~~~y~~~y~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~s~~~G~~~~~~~ 235 (976) T protein:vir:10 156 PEVFIDLKATAYARQYAVNLFDNTTTTAVSTVTRIDVELIKSSNNYCDSNGAMVARTSRPSNSTRCDDSAGDGRDAYAPN 235 (976) T ss_pred ceEEEEeeeeccceEEEEEEcCCcccceeeeeeeeeeccccCCcccccccccchhhHhHhhhhhcccccccccccccCce Confidence 67999999999999999999764321 222210000 000 Q ss_pred c--eee-------------------------------------------------------------------------- Q lcl|Aclame:pro 186 V--NEV-------------------------------------------------------------------------- 189 (801) Q Consensus 186 ~--~~~-------------------------------------------------------------------------- 189 (801) + ..+ T Consensus 236 v~~~~f~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~Y~~~y~~~~~v~~ 315 (976) T protein:vir:10 236 VGTKVFNVTDGASLTDEANSGSYTYTIDVKDSSNNSVNRGVNLYFRIRTVGQSVPFTTGSGSSATTTYQARYTTTFDLLY 315 (976) T ss_pred eeeeEEEeccCccceEcCCcceEEEEeeccccceEEeecCCceEEEEccccceeecccccccceeeeeeEEEEeEEEEec Confidence 0 000 Q ss_pred ----------------------------------------------------chHHHHHHHHhhhhhcccceeeeeeccc Q lcl|Aclame:pro 190 ----------------------------------------------------DGQAIAEKLAAQLRNNLGNPNNDQDPNK 217 (801) Q Consensus 190 ----------------------------------------------------~~~~ia~~l~~~~~a~~~~~~~~~~~~~ 217 (801) .+++++.+|...+. ..+...+ T Consensus 316 ~~~g~~~~~~~~V~v~g~~Y~it~~~~~~~~~~a~~~~~~~~~t~~d~~~~~~~~~ia~~L~~~l~-------a~~~~~g 388 (976) T protein:vir:10 316 GGTGWQEGDYFYVWMKDGYYKITVEAISTANVQANLGLIRPNPTPFDTETAVTAESIIGDIRTAII-------ATGNFTS 388 (976) T ss_pred CCCCcccCceEEEEccccceeeEEEEeeceeEEeccccccCcCCcCcccccccHHHHHHHHHHhhc-------ccccccc Confidence 00000000000000 0011123 Q ss_pred eEEEECCceEEEEeCCCceeEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCc-- Q lcl|Aclame:pro 218 WRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNR-- 295 (801) Q Consensus 218 ~~~~~~~~~~~i~~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~-- 295 (801) +.+...+..+++.++++. ++++++ +++.+..+++.|+++++||..|++|++|+|.+ +++..|+||++|+..+ T Consensus 389 ~tv~~~g~~~~i~~~~~~--~~~s~~---~~~~~~~~~~~V~~~~~LP~~~~~g~~v~V~~-~~~~~d~yyv~~~~~~~~ 462 (976) T protein:vir:10 389 ANVQQIGTGLYVTRPSGT--FNVTAP---SSDLLRVMSGEVANVDDLPSQCKHGYVVKVAN-SEADADDYYVKFFGHNNR 462 (976) T ss_pred eEEEEcCcEEEEEecCcc--eEecCC---CceeEEEEEeeecchhhhhhhccCCcEEEEec-CCCCceeEEEEeeccccc Confidence 455566777888776652 444332 34578899999999999999999999999955 5567799999998644 Q ss_pred ---eeEEEeeccceeeEEecCcceEEEEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEecCCE Q lcl|Aclame:pro 296 ---KVWVETIGWNTRTHLYYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGEN 372 (801) Q Consensus 296 ---~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~ 372 (801) ++|+||++|+..++++.++|||.|+++++++|+++.++|+.|.+||+++||+|||+|++|++|+||||||+|++|++ T Consensus 463 ~~~~~w~E~~~~g~~~g~~~~tmP~~l~~~~~g~f~~~~~~w~~r~vGd~~tnp~psf~g~~is~v~f~q~RL~f~s~~~ 542 (976) T protein:vir:10 463 DGDGVWEECAKPSRNIEFDKGTMPIQLVRQANGTFTVSQATWQNAEVGDELTNPNPSFVGKTINQLVFFRNRLVFLSDEN 542 (976) T ss_pred cccceEEEeeccccccccccccccEEEEecccCeEEeeeccccccccCCcccCcCceecccccceEEEEcceEEEecCCe Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCCccccccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCC-ccccccceEEEEEeeec Q lcl|Aclame:pro 373 IILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTAS-GILSSRSVELNLTTQFD 451 (801) Q Consensus 373 v~~S~~gd~~nF~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~-~~lTP~~~~i~~~s~~~ 451 (801) |||||+||||||+++|+.++.|||||++++++++++.|+|+++++++|+|||+++||+|+++ ++|||+|++++++|+|+ T Consensus 543 v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~e~~lsg~~~~lTP~t~~i~~~s~~~ 622 (976) T protein:vir:10 543 VIMSRPGEFFNFWSKTATTFTPQDVIDLSCSSTYPAIVYDGIQVNAGLLLFTKNQQFMLTTDSDILSPETAKINAVSSYN 622 (976) T ss_pred EEEEecCCccccccccccCCCCCccEEEEecCCcceeeEEEEecCCcEEEEecCceEEEecCCceecceeEEEEEEEeee Confidence 99999999999999999999999999999999999999999999999999999999999985 59999999999999999 Q ss_pred cccCCCcEEeCCeEEEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEE Q lcl|Aclame:pro 452 VQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVY 531 (801) Q Consensus 452 ~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 531 (801) |++.|+|+.+|+.++|+|++|+++|++||.+..+ .++|++.|||+|++|||+|.+..+ +++++|.+++|+++++|+|+ T Consensus 623 ~~~~v~Pv~vG~~v~Fv~~~g~~~r~~~~~~~~~-~~~~~~~dlt~~~~~l~~g~~~~~-a~~~~~~~vv~~~~~~g~l~ 700 (976) T protein:vir:10 623 FNEKTHPVSLGTTVAFIDNANQFTRFFEMSNVVR-QGEPDVVDQSKVISRLLDKNISLV-SVSRENSVVFFSQKDTDKIY 700 (976) T ss_pred ccCCCccEEeCCeEEEEecCCCeEEEEEEeeccc-ccccchhHHHHHhhhhcCCceEEE-EEcCCCcEEEEEEcCCCEEE Confidence 9999999999999999999999999999987655 478999999999999999987654 55667778889999999999 Q ss_pred EEEEEecCCceeEEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeecCCCC------------CcCccee Q lcl|Aclame:pro 532 IYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDI------------PGEPYRL 599 (801) Q Consensus 532 ~~ty~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~------------~~~~~~~ 599 (801) +|+|||+++||+|+|||||+|+|+++++|+. +|+||++|+|+++++++||.|++++... ....+.+ T Consensus 701 ~~ty~~~~~eq~v~aWsr~~~~G~v~sv~~i--~D~ly~vV~r~~~g~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (976) T protein:vir:10 701 CFRYFTSGEKRLLQAWTTWTITGNIQYHCML--DDALYVVTRNNNKDQIVKYSLKLDDAGHFVTDTQGTTSTDDDSIYRV 778 (976) T ss_pred EEEEeecCCceeEEeeEEEecCCcEEEEEEe--CCeEEEEEEecCCeEEEEEEEEECCccceeeeccCccccccCCccee Confidence 9999999999999999999999999998874 8999999999999999999999876321 1334568 Q ss_pred eeeeeeEEeeccccccccccceeeccccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEe Q lcl|Aclame:pro 600 YIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFN 679 (801) Q Consensus 600 ~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~ 679 (801) |||++..+++.++++++.+..+.+..+... ++.++.+...+||.... ......++.+++++|++++++++|+|||+ T Consensus 779 ~lD~~~~~~~~~~t~~~~t~~t~~~~~~~~---~~~~~~~~~~~d~~~~~-~~~~~~~v~g~~i~l~g~~~~~~v~VGl~ 854 (976) T protein:vir:10 779 HLDHSSSVTAASNTYNTTTIKTTIPKPNGY---ESTKQLVAYDTDAGNDL-GRYALVTVSGSNLEIPGNWSNNSFIIGYL 854 (976) T ss_pred eeccceEEEeccccccCCceeEEeecCccc---cCceeEEEEecccCccc-ccceeeeecCCeeEecCCCCCCeEEEeee Confidence 999999999999999999998888777654 45677888888876533 22333456777899999999999999999 Q ss_pred eeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCccccc-cccccccccccccccccccccc Q lcl|Aclame:pro 680 IPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIY-TMAGARLGSDNLRVGRSNIGTG 758 (801) Q Consensus 680 y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~tg 758 (801) |+++++|+||+++.+++++ ......+||+|||+++++.+||.|.+.+++.+++... ....... .....+.+|+.++ T Consensus 855 Y~s~~~~~~~~i~~~~g~~-~~~~~~gRl~i~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~--~~~~~~~~pl~~~ 931 (976) T protein:vir:10 855 YEMDVQLPTLYVTQQVGDK-YRSDAKSSLIVHRIKFSFGPLGVYSTTIQRDGKPDFTETKELGLA--GVVGASRLPIVPE 931 (976) T ss_pred eEEEEeecceeEEeCCCCc-ccccceeeEEEEEEEEEeecccceEEEEcCCCCcccccccccccc--CcccccccceecC Confidence 9999999999999887765 5567789999999999999999999999987776432 2222222 2223345666654 Q ss_pred -EEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEecc-ccCC Q lcl|Aclame:pro 759 -QYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRR-SSGI 801 (801) Q Consensus 759 -~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r-~rr~ 801 (801) .++|||.+|+++.+|+|+|+.|+||+|++|+|||+||+| +||| T Consensus 932 ~~~~vP~~~~~~~~~v~i~~d~PlP~tilsi~~eg~yn~r~~r~~ 976 (976) T protein:vir:10 932 VIETVPCYERNTNLKVNVKSEHPAPATLYSLAWEGDFTNRFYKRV 976 (976) T ss_pred cEEEEEeccCCceeEEEEEECCCCceEEEEEEEEEEeccceeecC Confidence 478999999999999999999999999999999999999 6777 No 17 >protein:vir:78703 Length: 905 # NCBI annotation: tail tube B # Family: family:all:825 # MgeID: mge:1856 # MgeName: Syn5 # Cross-refs: genbank:acc:YP_001285450;genbank:gi:148724484;genbank:GeneID:5220174 Probab=100.00 E-value=4.2e-206 Score=1146.52 Aligned_cols=767 Identities=25% Similarity=0.393 Sum_probs=632.1 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||||.+|+|||+++|+||+|||+.||+||||++||+.|.++ ....+++|.++||+.|+|++. T Consensus 1 M~~v~~si~nl~~GvSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRp~~~~i~~l~~~--~~~~~~~~~~~r~~~e~y~~~ 78 (905) T protein:vir:78 1 MGAVLQKIPNLLGGVSQQPDPVKLPGQVREAENVYLDPTFGCRKRPATKFVGELATN--LPSDTRWFPIFRDAGERYAVA 78 (905) T ss_pred CccceecchhhhCceeecchhhcCCcchhhhhccccccccccccCchhhhhhhhcCC--CCCCceEEEEEeCCCceEEEE Confidence 999999999999999999999999999999999999999999999999999999765 345689999999999999999 Q ss_pred EeCC-----eEEEEeC-CCeEEEEecC---CcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEE Q lcl|Aclame:pro 81 FTGE-----DIKVFDL-DGKEYQVRGD---RSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDAL 151 (801) Q Consensus 81 ~~~~-----~~rv~~~-~g~~~~v~~~---~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (801) ++.. .|||||+ +|.+++|.+. ..|+.+ .+.++|++++++|++||+|++++|++..... +.+.++|+ T Consensus 79 ~~~~g~~~~~i~v~d~~~G~~~~V~~~~~~~~yl~~-~~~~~l~~~tv~d~tfi~N~~~~~~~~~~~~----~~~~~~~~ 153 (905) T protein:vir:78 79 LYKDGSGNTQVRVWDMQTGAERTVTPDATATAYLAT-TNLNNLNWLTVADYTLLSNKERIVTMSGASE----VDSNQRAL 153 (905) T ss_pred EeeCCCCCcceEEEEccCCcEEEEecCCCccceeec-CCCcceEEEEEcCEEEEEcCceeeeecCCCC----cCCCCeEE Confidence 9743 4999998 8999999864 467754 4688999999999999999999998754432 45677899 Q ss_pred EEecCCCccceEEEEeCCceeEee---eeecccccccc--e--------------------------------------- Q lcl|Aclame:pro 152 INVRGGQYGRRLSIEFNGAERAAV---QLPDGSQPAHV--N--------------------------------------- 187 (801) Q Consensus 152 ~~v~~g~y~~~y~vti~~~~ta~~---~tp~~s~~~~~--~--------------------------------------- 187 (801) +++++++|+++|+|+|++...... .++.+...... . T Consensus 154 ~~v~~g~y~r~y~v~I~~~~~~~~~t~~~~~a~~~s~~s~~~~~~g~~~~~~~~~~~~~t~~~~~~l~f~~~~~~~~~~~ 233 (905) T protein:vir:78 154 VEINAISYNTTYSIDLDRDGASQQVKVYRAKALEISPGSFEVEDGGVCTEHDVQNYTNQTIGSSTGLAFQVRVQCAAYLE 233 (905) T ss_pred EEEEeeccceeEEEEEeCCCCceeeeeeccccceeccccccccccccccccceeeeecceeeccCCceeEEeeccccccC Confidence 999999999999999977433221 11111100000 0 Q ss_pred -------------------------ee-----------------------------------------chHHHHHHHHhh Q lcl|Aclame:pro 188 -------------------------EV-----------------------------------------DGQAIAEKLAAQ 201 (801) Q Consensus 188 -------------------------~~-----------------------------------------~~~~ia~~l~~~ 201 (801) .+ ...+++..|..+ T Consensus 234 ~~~~~~~~~~~~~l~~g~~~~~~~~~~~v~~~g~~y~i~i~~~~~~~~~~~~~~~~~~t~~d~~a~~~~~~~i~~~l~~~ 313 (905) T protein:vir:78 234 NNEYRSRYNVSVVLQNGGTGFRKGDMITVNLNGRDYNIRVTQEEFVYTYASDGTAAHTTPQDSTAGTLDIGQITAGLVNS 313 (905) T ss_pred CCcccccccceeeeeccccccccCccEEEeeccceEEEEEecceeEEEecCCCcccccCccCccCccccHHHHHHHHHHh Confidence 00 000111111110 Q ss_pred hhhcccceeeeeeccceEEEECCceEEEEeCCCceeEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCC Q lcl|Aclame:pro 202 LRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTS 281 (801) Q Consensus 202 ~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~ 281 (801) ......|.+...++.++|.+.++.. +.+++++|..++.+.++++.|+++++||++|++|++|+|.++.+ T Consensus 314 ----------~~~~~~~~~~~~g~~i~v~~~~~~~-~~~~~~~g~~~~~~~~~~~~v~~~~~Lp~~~~~g~~v~v~~~~~ 382 (905) T protein:vir:78 314 ----------VNLISNYSAQAVGNVIEIERTDGRD-FNLGVRGGATNRAMTAIKGTANSIVDLPGQCFDGFELKVINTEN 382 (905) T ss_pred ----------hcccccEEEEecCcEEEEEecCCCc-cEEEEeccCCcceEEEEeccccccccCccccCCCcEEEEEeCCC Confidence 0123457788889999999887754 57899999999999999999999999999999999999999999 Q ss_pred CccceeEEEEcc------CceeEEEeeccceeeEEecCcceEEEEEecCCeEEeeccC-------cCccccCCcccccCc Q lcl|Aclame:pro 282 KTADQYYVRFDL------NRKVWVETIGWNTRTHLYYHTMPWALVRASDGNFDFKVLE-------WGARTVGDDTTNPYP 348 (801) Q Consensus 282 ~~~~~yyv~~~~------~~~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~-------w~~~~~gd~~s~p~p 348 (801) ...|+|||+|+. +++.|+||++|+...+++.+||||.|++.++|+|+|+..+ |.+|.+||+++||.| T Consensus 383 ~~~d~yyv~~~~~~~~~~~~~~W~E~~~~~~~~~~~~~tmp~~l~r~~~g~f~~~~~~~~~~~~~~~~r~~Gd~~Tnp~p 462 (905) T protein:vir:78 383 AESDDYYVVFRSAAEGIPGSGSWEETVAPGIERGFNTSTMPHALIRQADGNFTLEALNDEGTITGWAQREVGDDDTNPKP 462 (905) T ss_pred CCcceEEEEEEecccCCcCceeEEEecccccccccccccccEEEEEecCceEEEEEeccccccccccccccCCcccCCCC Confidence 999999999964 4679999999999999999999999999999999999886 999999999999999 Q ss_pred cccCCCceEEEEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcE Q lcl|Aclame:pro 349 SFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQ 428 (801) Q Consensus 349 sf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q 428 (801) ||+|++|++|+||||||+|++|++|||||+||||||+++|++++.|||||++++++++++.|+|+++++++|+|||+++| T Consensus 463 sf~g~~is~v~f~q~RL~f~s~~~v~~Srtgd~~nF~~~t~~~~~DdDpI~~~~ss~~~~~i~~~v~~~~~L~ifT~g~e 542 (905) T protein:vir:78 463 SFVGRGISDMFFYNNRLGFLSEDAVIMSQPGDYFNFFVTSAITISDSDPIDVTASSTKPAILRAAIGAPKGLILFAENSQ 542 (905) T ss_pred cccCCCcceEEEEcceEEEecCCeEEEEccCCccccccccccCCCCCccEEEEEcCCcceeeEEEeecCCcEEEEecCce Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEeCCc-cccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCCCc Q lcl|Aclame:pro 429 FVLTASG-ILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGV 507 (801) Q Consensus 429 ~~~~~~~-~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~~~ 507 (801) |+|++++ +|||+|++++++|+|+|+++|+|+.+|++++|++++|+|++|+||.+ ++.+|+|.+.|+|+|++|||++++ T Consensus 543 f~lsg~~~~lTP~s~~i~~~S~~~~~~~v~Pv~vG~~vlFv~~~g~~s~vre~~y-~~~~d~y~a~DlT~~a~hl~~g~v 621 (905) T protein:vir:78 543 FLLASQEVVFSTATIKLTEISDYFYRSLAKPVSTGVSIAFVSEADTYSKIFEMSI-DSVDNRPQVADITRIVPEYVPTGL 621 (905) T ss_pred EEEecCCccccceeEEEEeEEeecccCCCCcEEeCCeEEEeecCCCeeEEEEEEe-eecccceehhHHHHHHHHhcCCce Confidence 9999865 79999999999999999999999999999999999999999999976 456789999999999999999998 Q ss_pred EEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEEee Q lcl|Aclame:pro 508 FSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMGNEHAVWMGRLHFTK 587 (801) Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d~l~~vv~r~~~~~~~r~~~~~ 587 (801) ..++ ++.|+.+ +|+.+++|+|++|+|||+++||+|+|||||+|+|.++++|+. .|.+|++++|..++...++.|+| T Consensus 622 ~~~~-~s~~~~~-v~~~~~~~~l~~ytyl~~~~eq~v~AWsrw~~~G~~~~~a~i--~d~~~~vV~r~~~G~~~~~~~~l 697 (905) T protein:vir:78 622 TWSV-STPNNSM-MLFGDNSNTAYIFKFFNQGNERQVAGWSKWILPGEQRMCGFF--ADTGYFVLYDSTTGSYVLSAMEL 697 (905) T ss_pred EEEE-ecCCCcE-EEEEcCCCeEEEEEeecCCCceeEEeEEEEecCCCeEEEEEE--cCCEEEEEEEccCCeEEEEEEee Confidence 7654 4555554 456788999999999999999999999999999999987765 46688999998888877777776 Q ss_pred cCC---CCCcCcceeeeeeeeEEeeccc-cccccccceeeccccccCcccccceEEEEecCCccccceeeccccccCcEE Q lcl|Aclame:pro 588 NSI---DIPGEPYRLYIDAKRKYTIPAG-TYNDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVL 663 (801) Q Consensus 588 ~~~---~~~~~~~~~~lD~~~~~~~~~~-t~~~~~~~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~ 663 (801) ... ...+.....++|+...+..... ++.. ...........+++.|++++.+...+||..........+. +... T Consensus 698 ~~~~~~~~~d~~~~~~~~~~d~~~~~~~~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~~~~~~--~~~~ 774 (905) T protein:vir:78 698 LDDPDSASIDTAFSSFLPRLDNYVVKSDLTVVD-NGDGTLTVDLEAGQAMTGATPVIMFTDGPSEFAFSQPTIT--AGQF 774 (905) T ss_pred ccccCccccccceeeeeeccceeeecccceecc-cCcceEeeeccCccccccceeEEEeeCCceeeeEEEEEee--ceee Confidence 321 1112223334444333332221 2211 1122223334578889999999999999765432222211 1112 Q ss_pred EEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCcccccccccccc Q lcl|Aclame:pro 664 RLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARL 743 (801) Q Consensus 664 ~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~ 743 (801) ++ ..+++|+|||+|+++++++|++++.+++ +...+|++|+|+.|+|++||+|.+++++.+++.+......+. T Consensus 775 t~---~~a~~v~VGl~Y~s~v~~~p~~~~~~~~-----s~~~~~~rI~rv~lr~~~Sg~~~v~v~~~~~~~~~~~~~~~~ 846 (905) T protein:vir:78 775 TV---DTTDDFVVGFKYETKITLPGFFTSEENK-----ADRVYAPIVEFLYLDLYYSGRYQIEVDRIGYDTINIDAGSID 846 (905) T ss_pred cc---ccCCeEEEeeeeeEEEeecceEeccCCC-----cccccceEEEEEEEEeecceeEEEEEcCCCcceeccccccee Confidence 22 2567899999999999999998865433 345678899999999999999999999998887665556666 Q ss_pred cccccccccccccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEecc-ccCC Q lcl|Aclame:pro 744 GSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRR-SSGI 801 (801) Q Consensus 744 ~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r-~rr~ 801 (801) ....+..+.|+.++|.++|||.+|+++.+|+|+|++|+||+|+||+|||+||+| ++|| T Consensus 847 ~~~~~~~~~p~~~tg~~~vP~~g~~~~~~v~I~sd~PlP~tvlsi~weg~Yn~r~~~~~ 905 (905) T protein:vir:78 847 ANIYLADGAPLKEIATENVPLFTPGDQVTVTIKAPDPFPSAITGYSWQGHYNRRGIAFI 905 (905) T ss_pred cCcccCcccccccccEEEEEeeccCceeEEEEEECCCCcEEEEEEEEEEEeccceeecC Confidence 667777788888999999999999999999999999999999999999999999 7778 No 18 >protein:vir:103790 Length: 768 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024932;genbank:gi:48697202;genbank:GeneID:2846114 Probab=100.00 E-value=6.6e-172 Score=959.04 Aligned_cols=734 Identities=12% Similarity=0.080 Sum_probs=536.8 Q ss_pred Ccceeeechhhhcc-----cccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~ 75 (801) ||+++++++||.+| +++|+|++||++||++|+||+++|+|||+||||++||++++++. ...++++|.|+++| T Consensus 1 M~~~~~~~~~F~~GelsP~l~~r~Dl~ry~~~~~~~~N~~~~~~gGl~rRpGt~fv~~~~~~~---~~~~lipf~~~~~~ 77 (768) T protein:vir:10 1 MPKAAPQQVSFDAGELSPLLGARVDLAKYPNGCQVMENFIATVQGPAIRRGGKRFVAATKDST---KQSWLLPFIVADGI 77 (768) T ss_pred CCcceeeeeeccCceechhhcccchHHHHHHHHhhhhcceeeecCCceecCchhhhhhhcCCC---CCeeEEEEEecCcc Confidence 99999999999999 89999999999999999999999999999999999999987643 45688999999999 Q ss_pred EEEEEEeCCeEEEEeCCCeEEE--------EecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCC Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQ--------VRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQ 147 (801) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~~--------v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~ 147 (801) +|+|+|++++||||+.+|.++. ..+...++.+.+++.+|+++|+||+|||+|++|||+++.|.++..| ... T Consensus 78 ~y~l~fg~~~irv~~~~g~v~~~~~~~e~~tp~~~~~l~~~~~~~~L~~~q~aD~~~i~~~~~~p~~l~r~~~~~w-~l~ 156 (768) T protein:vir:10 78 AYMLEFGDHYIRFFVNRGQLVNAGAPVEIATPYALADLTTEDGTFAIRATQSADTMYLFHGGYPTQKLLRTSATTF-SLQ 156 (768) T ss_pred EEEEEEcCCEEEEEECCcEEEecCeeEEEEcCCCcceeecccccceeEEEeecCEEEEEcCCcceeEEEEecCCCc-eeE Confidence 9999999999999998876532 1233345566677789999999999999999999999999887554 333 Q ss_pred ccEEEEecCCCccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceE Q lcl|Aclame:pro 148 GDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFI 227 (801) Q Consensus 148 ~~~~~~v~~g~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 227 (801) +..+...+...++...++++....+....|..++. +.....++...+... ........+|......+.. T Consensus 157 ~~~~~~gp~~~~n~~~~vti~~s~~~~~~T~tasa----~~~~~~~v~~~~~l~-------~~~~~~~~~~~~~~~~g~~ 225 (768) T protein:vir:10 157 PVTFVGGPFAAVNSDNNVRVHASAGTGAVTLVASA----SVFRPSDVGTLFYLE-------QEDNSFVKPWVVHQKIGPS 225 (768) T ss_pred EeeecCccccccccceeEEEEecccceeEEEeecC----Cccchhhcceeeeee-------eeccccccccEEEEeeeeE Confidence 33333333334444444444322111111111111 111122221111111 0111122334433333333 Q ss_pred EEEeCCCceeEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEee---cc Q lcl|Aclame:pro 228 HILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETI---GW 304 (801) Q Consensus 228 ~i~~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~---~~ 304 (801) .+.+.++......++.++..+ ....+++.+..|+.+.+.+......+.+ ......|+... +. T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~-----------~~~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 290 (768) T protein:vir:10 226 ELRRVGDRVYLCTAVGTATPQ-----------VTGTETPTHTSGSRWDGTGQDESATDEY----GSIGAEWEYQHSGYGT 290 (768) T ss_pred EEEecCCceEEeeeecccccc-----------ccceeccccccCceEEEecCcccccccc----cccceEEEEEEcCCce Confidence 444444433332222211100 1112234444555544434333222211 00011122111 22 Q ss_pred ceeeEEecCcceEEEEEecCCeEEeeccCcCccccCC-cccccCccccCCCceEEEEEcCeeEEecCCEEEEEecCCccc Q lcl|Aclame:pro 305 NTRTHLYYHTMPWALVRASDGNFDFKVLEWGARTVGD-DTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFN 383 (801) Q Consensus 305 ~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd-~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~n 383 (801) +....+...+|++..++...+++.+..+++.....+. ++....++-..+||++|+||||||+|++|++|||||+||||| T Consensus 291 ~~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g~Ps~v~f~q~RL~f~~~~~v~~Srtgd~~n 370 (768) T protein:vir:10 291 VLITGYTNDQVVTGTVATNDPADPGMLPNTVVTLTGTYKWARSLFNSTDGFPQMGTFWRNRLCLMRDRWLAMSVSADFET 370 (768) T ss_pred EEEEEecCCeeEEeeeeeecCcccccccccccccCCCcccccCCCcCCCCCceEEEEEeeeEEEeeCCEEEEEccccccc Confidence 2334556667888877776666665555544433332 333444444556778899999999999999999999999999 Q ss_pred cccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCC---ccccccceEEEEEeeeccccCCCcEE Q lcl|Aclame:pro 384 FFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTAS---GILSSRSVELNLTTQFDVQDRARPHG 460 (801) Q Consensus 384 F~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~---~~lTP~~~~i~~~s~~~~~~~~~Pv~ 460 (801) |++++++++.|||||++++++++++.|+|++++ ++|+|||+++||+|+++ ++|||+|++++++|.|+|+ +|+|+. T Consensus 371 F~~~s~~~~~DdD~I~~~~ss~~~~~i~~~v~~-~~L~i~T~~~q~~l~~~~~~~~lTP~~~~i~~~s~~g~~-~~~Pv~ 448 (768) T protein:vir:10 371 FKTKDADQQTDDSAIVQQLNARQLNKLAWMVES-DSLLIGMTGDEWVIGPANASQPVSAANLNAARRTSYGSK-RIQPVQ 448 (768) T ss_pred ccccccccccCCccEEEEecCCcceeEEEEeec-CcEEEEecCceEEEecCCCCcccccceEEEEEeehhccc-ccccEE Confidence 999999999999999999999999999999998 58999999999999873 5899999999999999875 699999 Q ss_pred eCCeEEEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCCC------cEEEEEeCCCCeEEEEEEcCCCeEEEEE Q lcl|Aclame:pro 461 VGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNG------VFSISGTTAENFAAILTSGAPNRVYIYK 534 (801) Q Consensus 461 vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~g~l~~~t 534 (801) +|++++|+|++|+ ++|||.+ ++.+|+|+++|+|+|++||+++. +..++++++|+.+ +||+++||+|++|+ T Consensus 449 vG~~v~fv~~~g~--~vre~~y-~~~~d~y~a~DlT~~a~hl~~~~~~~~~~i~~~a~~~~p~~v-~~~v~~dg~l~~~t 524 (768) T protein:vir:10 449 VGGTIMFVQKAGR--KLRDFKY-DFSSDNYVSTDVTKIADHITRGRAGTNSGIMSLCFQQEPHSV-VWAARADGQLIGCT 524 (768) T ss_pred eCCeEEEEcCCCC--EEEEEEe-eeecCceecchhhhhhhhhccccCccccceeeEEEeecCCeE-EEEEecCCeEEEEE Confidence 9999999999994 6889876 46689999999999999999864 6677777766555 57778899999999 Q ss_pred EEecCCceeEEeEEeeec-CCCeEEEEEE----EcCCEEEEEEEeCCCEEEEEEEEeecC--CCCCcCcceeeeeeeeEE Q lcl|Aclame:pro 535 FLYIDEEIRQQSWSHWDF-GDNVTVFAAQ----VINSTMTVLMGNEHAVWMGRLHFTKNS--IDIPGEPYRLYIDAKRKY 607 (801) Q Consensus 535 y~~~~~e~~v~aW~~w~~-~g~~~~~~~~----~~~d~l~~vv~r~~~~~~~r~~~~~~~--~~~~~~~~~~~lD~~~~~ 607 (801) |++++++|+|+|||||++ +|.|+++|+. +.+|.||++|+|.++++.+||+|++++ .......+.+||||+..+ T Consensus 525 y~~e~~~q~v~aW~~~~~~~g~v~~v~~i~~~~g~~d~l~~~v~r~~~g~~~~~ie~l~~~~~~~~~~~~~~~~D~~~~~ 604 (768) T protein:vir:10 525 YDEEAGRSDVYGWHRHPDANGFVECVASMPAPDGASDDLWVIVRRQVNGQTVRYVEYLNPALQDDEPQSSAFYVDAGITY 604 (768) T ss_pred EecCCCceeEEeEEEEEcCCCEEEEEEEEecCCCCccEEEEEEEecCCCeEEEEEEecCcccccccccccceEecccccc Confidence 998888899999999985 6888888874 347999999999999999999999987 344456788999998765 Q ss_pred eeccccccccccceeeccccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeC Q lcl|Aclame:pro 608 TIPAGTYNDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFS 687 (801) Q Consensus 608 ~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~ 687 (801) .... ...++|+.|++|+++.+++||..++..++.+| +|.++.++++|+|||+|+++++++ T Consensus 605 ~~~~-------------~~~~~gl~~leg~~v~v~~dG~~~~~~~v~~g-------~itl~~~~~~v~vG~~y~s~~~~~ 664 (768) T protein:vir:10 605 NGVP-------------TSTIAGLGHLEGVTVAVLTDGAVHPSRTVTAG-------AITLDWSASIVHIGVPTTCRIQTM 664 (768) T ss_pred CCcc-------------eeeecCCCCcccceEEEEECCEeccCceecCC-------EEEeCCCCceEEEeEeeeEEEEec Confidence 4321 12478999999999999999999988877666 355568899999999999999999 Q ss_pred CeeEEecCCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEee- Q lcl|Aclame:pro 688 KFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVG- 766 (801) Q Consensus 688 ~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~- 766 (801) ||+++.++ | +...+|+||+|+.|+|++|+++.++++...+. ...+..+..++ .....++++||++++|+.+ T Consensus 665 p~~~~~~~--g---s~~~~~~ri~r~~v~~~~S~~~~~~~~~~~~~-~~~~~~r~~~~--~~~~~~~l~TG~~~v~~~~~ 736 (768) T protein:vir:10 665 QLNAGAAN--G---TAQGKTKRVTNIATRFSRSLGGVVGPTFDDND-LEQLSFRKPSN--AMDRAVPLFDGDMESDWRGG 736 (768) T ss_pred ceEeecCC--c---cccccceEEEEEEEEEecccceEEEecCCCCC-ceeeeeEecCc--ccCccCCcccCEEEEEecCC Confidence 99987443 3 23457899999999999999999987655432 11111122222 1223467899999999876 Q ss_pred cCceEEEEEEECCcCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 767 NAQTNLVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) Q Consensus 767 ~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~ 798 (801) |+++.+|+|+|++|+||+|+||+||+++|+|+ T Consensus 737 ~~~~~~i~i~~d~P~P~tvlsi~~~~~~nd~~ 768 (768) T protein:vir:10 737 YEGQSWICYQNDQPLPVTLLGFFPILDTQDDR 768 (768) T ss_pred CCcceEEEEEECCCCCEEEEEEEEEEEEeecC Confidence 57889999999999999999999999999999 No 19 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=100.00 E-value=5.5e-160 Score=893.70 Aligned_cols=719 Identities=12% Similarity=0.079 Sum_probs=522.0 Q ss_pred Ccceeeechhhhcc-----cccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~ 75 (801) |+ |+++++||.+| +++|+|++||++||++|+||+++|+|||+||||++||+++++++ ...++++|.|++.| T Consensus 1 m~-i~~~q~sF~~GElsP~l~gR~Dl~ry~~q~~~~~N~~~~~~GGl~rRpGt~fva~~~~~~---g~~rLipf~~s~~q 76 (823) T protein:vir:95 1 MA-ISWIQPSFAGGEIGPSLYGRIDMAKYQVALRKCDNFIVRQYGGVENRPGTRFVGAAKYPN---RKCRLIPFQFSTVQ 76 (823) T ss_pred Cc-ceeechhccCceechheeccchHHHHHHHHhhhhCcEeeecCCceecCchhhhhhhcCCC---CCeeEEEEEeCCCc Confidence 99 99999999999 89999999999999999999999999999999999999987653 45689999999999 Q ss_pred EEEEEEeCCeEEEEeCCCeEEEEecCCcc----cccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEE Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQVRGDRSY----VRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDAL 151 (801) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~~v~~~~~y----~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (801) +|+|+|++++||||+.+|.++ ..+..+| ++++.++.+|+|+|+||+|||+|++|||+++.|.++.. |...+..+ T Consensus 77 ~y~Lefg~~~irV~~~~g~vv-~~~~~~~ev~tPy~~~~l~~Lr~~qsaD~~fivh~~~~p~~L~r~~~~~-w~l~~~~~ 154 (823) T protein:vir:95 77 TYALEFGHQYMRVIKDGALVL-NSSNVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDN-WQLVDVVT 154 (823) T ss_pred EEEEEEcCCeEEEEeCCcEEE-ecCCceeEEecccccccccceeEEEeccEEEEEcCCccceEEEecCCCC-ceEEEEEE Confidence 999999999999998666432 2222221 23555788999999999999999999999999998754 33333333 Q ss_pred EEecCCCccceEEEEeCCcee-EeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEE Q lcl|Aclame:pro 152 INVRGGQYGRRLSIEFNGAER-AAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHIL 230 (801) Q Consensus 152 ~~v~~g~y~~~y~vti~~~~t-a~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~ 230 (801) ...+.++.+..+++++..... +.++.+ ++.+ .+..+... ............+... ...... T Consensus 155 ~~gp~~~~~~~~t~~v~~~~~~~~~t~t-a~~~----~~~~d~vg------------~~~~l~~~~~~~~~~~-~~~~~~ 216 (823) T protein:vir:95 155 KNGPFEDINIDESLTVYASASTGTITLT-ASAS----IFGAEQVG------------KLFYLEQPAVDSVPVW-ETSKST 216 (823) T ss_pred eccccccccccceeEEeccccCceeEEe-eccc----ccchhhcc------------ceEEEeccccceeeec-ceeeee Confidence 333334444444444432221 111111 1111 01111000 0000000000000000 000000 Q ss_pred eCCCceeEEEEeecCCCccceeeeeeecccceeccce-eeCCeEEEeeccCCCccceeEEEEccCceeEEEeecccee-e Q lcl|Aclame:pro 231 APNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPIN-APDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTR-T 308 (801) Q Consensus 231 ~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~-~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~-~ 308 (801) ..+. ..... .+... . ........+++. .+..+.+...++.......+|..+..+.|.|++++..+.. . T Consensus 217 ~~~~------~~~~~-~~~~~-~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~t~v~~~~~~ 286 (823) T protein:vir:95 217 SIGD------IRRAD-SNYYR-A--VTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLHSGFGIARITAVNGTTAT 286 (823) T ss_pred cccc------eEEec-cccee-e--eeccccceeecccCCcceEEeceecccccceeEEEEEeCCcceEEEEeecceeee Confidence 0000 00000 00000 0 001111122222 2233333333322222222333345677889887655533 3 Q ss_pred EEecCcceEEEEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEec----CCEEEEEecCCcccc Q lcl|Aclame:pro 309 HLYYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS----GENIILSRTSKYFNF 384 (801) Q Consensus 309 ~~~~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~----~~~v~~S~~gd~~nF 384 (801) .....+||+.+++.++++|.+....|.+ ..+||++|+||||||+|++ |++|||||+|||+|| T Consensus 287 ~~~~~~~~~~~~~~~~~t~~~~~~~~~~--------------~~g~Ps~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF 352 (823) T protein:vir:95 287 AEVISYIPSQVVGEDNASYKWAKYAWNS--------------VNGYPGTVVYYQQRLYFAASTAFPQTIWASRTGDYKDF 352 (823) T ss_pred ceEeeeeccccccCCcCCccccccccCc--------------CCCCccEEEEEeceEEEEEcCCCCcEEEEeccCCcccc Confidence 4445678999999999998887777764 3488999999999999995 799999999999999 Q ss_pred ccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeeccccCCCcEEeC Q lcl|Aclame:pro 385 FPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTAS--GILSSRSVELNLTTQFDVQDRARPHGVG 462 (801) Q Consensus 385 ~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg 462 (801) ++++++ +|||||++++++++++.|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|.|++ ++|+|+.+| T Consensus 353 ~~~~~~--~DdD~I~~~~s~~~~~~i~~~v~~~-~Lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~vg 428 (823) T protein:vir:95 353 GKSNPT--QDDDRIIYTYAGRQVNEIRHLIDVG-SLVALTSGGEYVITGDQNKVLTPSSFAFSSQGSNGS-SNVPPIAVA 428 (823) T ss_pred ccccCC--CCCCcEEEEEcCCcceEEEEEeecC-cEEEEecCcEEEEEcCCCcccceeeEEEEEeecccc-ccccceEeC Confidence 999875 6999999999999999999999995 7999999999999865 689999999999999976 579999999 Q ss_pred CeEEEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCC-CcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCc Q lcl|Aclame:pro 463 RNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-GVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEE 541 (801) Q Consensus 463 ~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e 541 (801) +.++|+|++|+ ++|||.|. +.+++|.+.|+|+|++||+++ ++.+++++++|+.++ |+.++||+|++|+|+ +| T Consensus 429 ~~~~Fv~~~g~--~vre~~~~-~~~d~~~~~dlT~~a~hl~~~~~i~~~a~~~~p~~~~-~~v~~dG~l~~~ty~---~~ 501 (823) T protein:vir:95 429 NIALFVQEKGS--VVRDLAYS-FDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSA-FCIRDDGKLLVMTYL---RD 501 (823) T ss_pred CeEEEEecCCC--EEEEEEEe-eecCceecchhhhhhhhhcCCCceEEEEEecCCCeEE-EEEecCCcEEEEEEe---cc Confidence 99999999884 78999765 567999999999999999987 577788777777665 667789999999997 78 Q ss_pred eeEEeEEeeecCCCeEEEEEE--EcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeecccc------ Q lcl|Aclame:pro 542 IRQQSWSHWDFGDNVTVFAAQ--VINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGT------ 613 (801) Q Consensus 542 ~~v~aW~~w~~~g~~~~~~~~--~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t------ 613 (801) |+|.|||||+++|+|+++|+. +.+|+||++|+|+++++.++|+|+|++......++.+||||+..|.+.... T Consensus 502 q~v~aW~~~~~~g~~~~~~~i~~~~~d~l~~~v~R~i~g~~~~yiE~~~~~~~~~~~~~~~lD~~~s~~g~~~~~~~~~l 581 (823) T protein:vir:95 502 QQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMTI 581 (823) T ss_pred cceeeeEEEecCCcEEEEEEecCCCCCEEEEEEEeccCCeEEEEEEeeccccCCCccceeEEEEEEEeecCcccceeeEe Confidence 889999999999999999985 457999999999999999999999999887888899999999877531110 Q ss_pred ---------------------c-cccccceee------------------------------------------------ Q lcl|Aclame:pro 614 ---------------------Y-NDDTYQTSI------------------------------------------------ 623 (801) Q Consensus 614 ---------------------~-~~~~~~~~~------------------------------------------------ 623 (801) . ........+ T Consensus 582 ~~g~~~l~~l~g~~v~~adg~~~~~~~v~g~i~l~~~~~~~~vGl~~~~~i~~~~~~v~~~~a~~~~~~r~v~a~l~~~~ 661 (823) T protein:vir:95 582 TGGSGEWDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNTAVVVRANRNVPPSLRNVA 661 (823) T ss_pred cCCCCcccccCceEEEecCcceECCccceeEEEeCcCCCccccccceEEEEEEeeceeeCCceEEEccCCcccceeeeee Confidence 0 000000000 Q ss_pred ------ccccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCC Q lcl|Aclame:pro 624 ------SLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAED 697 (801) Q Consensus 624 ------~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~ 697 (801) ....++||+||||++|.+++||.+++..+|.+|. |++..+++.|+|||+|+++++++|+++..+ T Consensus 662 t~~~~~~~~~~~gL~hleg~tv~v~~dg~~~~~~~v~~G~-------vtl~~~~~~v~vGl~~~~~~~~l~~~~~~~--- 731 (823) T protein:vir:95 662 TTNWQMARRTFGGLSHLEGQTVNILSDANVEPQKVVSGGA-------VTLESPGAVVHIGLPITAEFETLDININGQ--- 731 (823) T ss_pred ccccccccceeeeccccccceEEEEEcCeeeCCeEecCCE-------EEecCCCCEEEEeecceeeEEecchhcCCC--- Confidence 0113469999999999999999999999998883 344478999999999999999999997632 Q ss_pred CceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCcccccccccccccccccccccccccccEEEEEE-eecCceEEEEEE Q lcl|Aclame:pro 698 GSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPV-VGNAQTNLVTIE 776 (801) Q Consensus 698 g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~-~~~~~~~~v~i~ 776 (801) |.. ...++||+++.++|++|.++.+..+...-++.. .+. . ......|+++||++++++ .+|+++++|+|+ T Consensus 732 g~~---~g~~~ri~~~~~~~~~s~~~~~g~~~~~l~~~~---~r~-~--~~~~~~~~~~tG~~~~~~~~~~~~~~~~~i~ 802 (823) T protein:vir:95 732 ETL---LDKKQVIPSVTLVVNASRGIWATTPGGKWYEYP---QRE-F--EFYDDPVDDATGKVEVKLDSNWGKNGRVKIR 802 (823) T ss_pred ccc---CCceeEEeEEEEEEEeeeeEEEecCCCceeEee---ccC-C--CcccCCCCcccceEEEecCCCcCCccEEEEE Confidence 322 234568999999999999999875333212221 121 1 234455789999999987 579999999999 Q ss_pred ECCcCCEEEEEEEEEEEEecc Q lcl|Aclame:pro 777 SDASTPLNIIGCGWEGNYLRR 797 (801) Q Consensus 777 ~~~P~P~tvlsi~~eg~y~~r 797 (801) |++|||||||||..|...+-= T Consensus 803 q~~plp~tvl~v~~~~~~~g~ 823 (823) T protein:vir:95 803 QLDPLPLSVLAVIPRLTVGGF 823 (823) T ss_pred EcCCCceEEEEEEEEEEecCC Confidence 999999999999988775444 No 20 >protein:vir:1778 Length: 680 # NCBI annotation: tail protein A # Family: family:all:825 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570344;genbank:gi:18640503;genbank:GeneID:932716 Probab=100.00 E-value=1.3e-160 Score=897.15 Aligned_cols=538 Identities=27% Similarity=0.463 Sum_probs=469.3 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~ 80 (801) ||+|+|+||||++|||||||.+|+||||++|+||+|||+.||+||||++||+.|.+. ...+.||.++||++|+|++. T Consensus 1 M~~v~~si~nl~~GvSqQp~~~r~pgQ~~~q~N~~~d~v~Gl~kRpg~~~i~~l~~~---~~~~~~~~~~rd~~e~~~~~ 77 (680) T protein:vir:17 1 MAAVEQMVPNLLGGISQQPDPLKLPGQVKQARNVQLDPTFGALKRPGTELIMQVTGI---PKRAKWIPIMRDAREHYYVA 77 (680) T ss_pred CccceecchhhhCcceecchhhcCcchhhhhhccccCcCcccccCccceeeeeccCC---CCCceeEEEecCCCCeEEEE Confidence 999999999999999999999999999999999999999999999999999998654 45678899999999999999 Q ss_pred EeCCe--------EEEEeC-CCeEEEEecCCcccc-----cCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCC Q lcl|Aclame:pro 81 FTGED--------IKVFDL-DGKEYQVRGDRSYVR-----TANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKD 146 (801) Q Consensus 81 ~~~~~--------~rv~~~-~g~~~~v~~~~~y~~-----t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~ 146 (801) ++... |||||+ +|++++|.+...+++ ++++..+||+++++|++||+|+++.|++... +..+ T Consensus 78 ~~~~g~~~~~~~~i~v~d~~~G~~~~v~~~~~~~~~~~~~~~~~~~~lr~~tv~d~tfi~N~~v~~~~~~~-----~~~~ 152 (680) T protein:vir:17 78 IYREGANESGDLRIRVFDLKAGVERAVSFVGGEVEEYFPGDETDWEAIRSLTIGDYTFLSNPNVQPTTWSR-----SFSR 152 (680) T ss_pred EEcCCCcccccceeEEEEccCCeEEEEEcCCCceEEEeecCCCCccceEEEEEcCEEEEECCeEEEeccCC-----CCCC Confidence 97654 999997 799999998876553 3445679999999999999999999987654 2345 Q ss_pred CccEEEEecCCCccceEEEEeCCceeEee-----eeecccc----------ccc----cee------------------- Q lcl|Aclame:pro 147 QGDALINVRGGQYGRRLSIEFNGAERAAV-----QLPDGSQ----------PAH----VNE------------------- 188 (801) Q Consensus 147 ~~~~~~~v~~g~y~~~y~vti~~~~ta~~-----~tp~~s~----------~~~----~~~------------------- 188 (801) .+.++++++.++|+++|.|++++...... +...++. ... ... T Consensus 153 ~~~g~~~v~~~ayg~ty~v~ing~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~Ag~~t~~~~~~a~la~~l~~~~~~~~~ 232 (680) T protein:vir:17 153 RPEGLVTIGAAGYGTSYIVDFATEDSGQQRRWAVQEMQAPKTKRKKGDGSPDEAGETTVNNWNGTGLSFRVKVEARAFLV 232 (680) T ss_pred CCeeEEEEEEeeeeeEEEEEEeccccceeeeeeeeeeeccccccccccccCCCCcceeeeeeeeeeeeeeeeeccceeee Confidence 66799999999999999999976332110 0000000 000 000 Q ss_pred ----------------------------------------------------------------------echHHHHHHH Q lcl|Aclame:pro 189 ----------------------------------------------------------------------VDGQAIAEKL 198 (801) Q Consensus 189 ----------------------------------------------------------------------~~~~~ia~~l 198 (801) ++.++|+..| T Consensus 233 ~~g~~~~~~y~~~~~l~~tg~~~~~~~~t~~v~~~G~~y~IsI~~~~~~~~~~~~~s~~~~t~~~~~a~~at~~~Ia~~L 312 (680) T protein:vir:17 233 DDGEEYGHNYIPYVTLLTPGNNTSPFPDTIRVDVSGEGWDIKVTKQIQSKVYANLGTAQFTTPVDQSGGGASTSDIVTGL 312 (680) T ss_pred cCCCceEEEEeeEEEEecCCccccccCceEEEecccceeEEEEccceeeEeccCccceeeeeccCCcccceeHHHHHHHH Confidence 0111111111 Q ss_pred HhhhhhcccceeeeeeccceEEEECCceEEEEeC--CCceeEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEe Q lcl|Aclame:pro 199 AAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAP--NNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKI 276 (801) Q Consensus 199 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i 276 (801) ..++ ....++.+.+.++.+|+... .+.+.+.++++++.+++++.++++.++++++||++||+||+|+| T Consensus 313 ~~~i----------~~~~~~~~~~~g~~i~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~Lp~~a~~g~~v~v 382 (680) T protein:vir:17 313 SAAI----------NGLGTFTAESIGNVIRVRYSDPTRTDEFTMSARGGTSGTGLESIKYSVDTLAELPTKCWNDYQVAV 382 (680) T ss_pred HHhh----------cccCcEEEEECCCEEEEEeccCCCceEEEeeccCCCCceeeeeeeeeeccccccccccCCCcEEEE Confidence 1111 12235677788888888543 45667889999999999999999999999999999999999999 Q ss_pred eccCCCccceeEEEEcc--------CceeEEEeeccceeeEEecCcceEEEEEecCCeEEeeccC-------cCccccCC Q lcl|Aclame:pro 277 VGDTSKTADQYYVRFDL--------NRKVWVETIGWNTRTHLYYHTMPWALVRASDGNFDFKVLE-------WGARTVGD 341 (801) Q Consensus 277 ~~~~~~~~~~yyv~~~~--------~~~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~-------w~~~~~gd 341 (801) .++.++..++|||+|+. ..++|+||++|+...+++.+||||.|++.++|.|.++..+ |++|.+|| T Consensus 383 ~~~~~~~~~~Yyv~~~~~~~~~~~~~~~~W~E~~~~~~~~~~~~~tmp~~l~r~~~g~f~~~~~~~~~~~~~~~~r~~Gd 462 (680) T protein:vir:17 383 RNTQDTEVDDYYVKFETDVEDADVPGSGYWVETVKNGDDGGLVDDTMPHVLVRNALGDFTFSSLNNSSYGKTWADRSVGS 462 (680) T ss_pred EeCCCCcccceEEEEeccCcccCcccccceeecccCcccceeccCcceEEEEEccCceeEEEeeccccccccccccccCC Confidence 99999999999999986 4568999999999999999999999999999999999875 99999999 Q ss_pred cccccCcccc--CCCceEEEEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCccEEEEEcCCcceEEEEEeecCCc Q lcl|Aclame:pro 342 DTTNPYPSFT--GQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEE 419 (801) Q Consensus 342 ~~s~p~psf~--g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~ 419 (801) |++||.|||+ |+||++|+||||||+|++|++|||||+||||||++++++++.|||||++++++++++.|+|+++++++ T Consensus 463 d~tnp~psF~~~G~~p~~v~f~q~RL~f~s~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i~~~v~~~~~ 542 (680) T protein:vir:17 463 EDTNPHPTFTESGNGIYGMFMYKNRLGFLTQDAVIMSQVGDYFNFYATSGVTISDADPIDMATSDTKPVKLEAAISSTSG 542 (680) T ss_pred cccCCCcccccCCCCceEEEEEcceEEEeeCCeEEEEccCCcccccccccccCCCCccEEEEEcCCcceeeeEEeecCCc Confidence 9999999999 88999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEecCcEEEEeCC-ccccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEEEeeecccccceehhhHHHH Q lcl|Aclame:pro 420 LLLWSDQAQFVLTAS-GILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAH 498 (801) Q Consensus 420 L~~~t~~~q~~~~~~-~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~ 498 (801) |+|||+++||+|+++ ++|||+|++++++|+|+|++.|+|+.+|+.++|++++|+|++||||. +++.+|+|++.|||+| T Consensus 543 L~l~t~g~q~~ls~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~s~vre~~-y~~~~d~y~a~DlT~~ 621 (680) T protein:vir:17 543 AILFGNQAQFRLSSPDESFGPKTATLDKISNYTYESKADPVQTGVSMIFPTNMGTYSSVYELS-TESAKGTPVIEDSSRV 621 (680) T ss_pred EEEEecCeEEEEecCCceecceeEEEEEEEeecccCCCCceEeCCeEEEeecCCCcceEEEEe-eeeccCceehhhHHHH Confidence 999999999999884 69999999999999999999999999999999999999999999995 5777899999999999 Q ss_pred HHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeE Q lcl|Aclame:pro 499 VPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVT 557 (801) Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~ 557 (801) ++|||+|++..++++++++.+++|+++++|+|++|+|||+++||+|+|||||+|++.-. T Consensus 622 a~hl~~g~v~~~~~~~~~~~~~~~~~~~~~~l~~~~yl~~~~e~~v~aW~rw~~~~~d~ 680 (680) T protein:vir:17 622 IPRLIPSGLTWSTASMNNDTVFFGNAKKGRNVYVFRFFNEGQERKVAGWTTWYYEDQDH 680 (680) T ss_pred HHHhcCCceEEEEeeCCCCeEEEEEEcCCCEEEEEEEeeCCCceEEEEEEEEecCCCCC Confidence 99999999999999999999999999999999999999999999999999999987543 No 21 >protein:vir:98487 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1592 # MgeName: BMP-1 # Cross-refs: genbank:acc:NP_996575;genbank:gi:45569506;genbank:GeneID:2767815 Probab=100.00 E-value=4.2e-157 Score=877.91 Aligned_cols=662 Identities=11% Similarity=0.111 Sum_probs=492.0 Q ss_pred Ccceeeechhhhcc-----cccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~ 75 (801) |++++.+++||.+| +.+|.|++||+++|++|+||++.|+||++||||++||+++++++ ...|+++|.++++| T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~---~~~rlipf~~~~~~ 77 (681) T protein:vir:98 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSA---KKVRLIPFTYSVTQ 77 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCC---CcEEEEEEEeCCCc Confidence 99999999999999 67999999999999999999999999999999999999998763 35689999999999 Q ss_pred EEEEEEeCCeEEEEeCCCeEEE----EecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEE Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQ----VRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDAL 151 (801) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~~----v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (801) +|||||++++||||..+|.++. ++...| +++.++.+|+|+|+||+|||+|++|||+++.|.++..| ...++.+ T Consensus 78 ~~~l~~g~~~~r~~~~~~~~~~~~~~~~~~tp--y~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W-~l~~~~f 154 (681) T protein:vir:98 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANP--YAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNW-QLATIAF 154 (681) T ss_pred eEEEEEeCCeEEEEeCCcEEeeCcEeEEecCC--CChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCce-EEEEEEe Confidence 9999999999999987665532 222333 45667899999999999999999999999999887553 2222211 Q ss_pred EEecCCCccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEe Q lcl|Aclame:pro 152 INVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILA 231 (801) Q Consensus 152 ~~v~~g~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~ 231 (801) ..+.... .++ +++...++.. .+.. .++.+ T Consensus 155 --~~~p~~p--~~~-----------~at~~~~~~~----------------------~t~~--------------~~v~a 183 (681) T protein:vir:98 155 --TSPVATP--TSV-----------TATSNNKGTD----------------------YTYR--------------YVVTA 183 (681) T ss_pred --ccccccc--eee-----------eeeccCCccc----------------------eeEe--------------EEEEE Confidence 1111000 000 0000000000 0000 00000 Q ss_pred CCCceeEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEe Q lcl|Aclame:pro 232 PNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLY 311 (801) Q Consensus 232 ~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~ 311 (801) .+..... +.......+ .+. ..+ ..+....+.++...+...|.+. ....+.|.- ++......+. T Consensus 184 vda~t~~--~s~~~~~~t----vt~--~~~-------~~~~~~t~~w~a~~g~~~~~V~-~~~~gi~g~-ig~~~~~~~~ 246 (681) T protein:vir:98 184 LDAEGKT--ESAPSSAGT----CTN--NLF-------TNGGANTIAWSASSGASRYNVY-KEQGGLYGY-IGQTTGTSLV 246 (681) T ss_pred eecccce--eecCCcceE----Eee--eee-------cCCcceeEEEEecCCceeeeec-ccceeEEEE-eeccceeeee Confidence 0000000 000000000 000 000 0111111222222232233221 122233322 2222222221 Q ss_pred cCcceEEEEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEe----cCCEEEEEecCCccccccc Q lcl|Aclame:pro 312 YHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFL----SGENIILSRTSKYFNFFPA 387 (801) Q Consensus 312 ~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~----~~~~v~~S~~gd~~nF~~~ 387 (801) ...+ .+......+ +....++-.++||++|+||||||+|+ +||+|||||+|||+||+++ T Consensus 247 ~~~~-----------------~~~~~~t~~-~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~ 308 (681) T protein:vir:98 247 DDNI-----------------APDLSVTPP-IYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYS 308 (681) T ss_pred eccc-----------------ccCcccccc-ccccccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCccccccc Confidence 1111 111111111 11223444678999999999999999 4899999999999999999 Q ss_pred cCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeeccccCCCcEEeCCeE Q lcl|Aclame:pro 388 SVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTAS--GILSSRSVELNLTTQFDVQDRARPHGVGRNV 465 (801) Q Consensus 388 t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v 465 (801) +++ .|||||++++++.+++.|+|+++++ +|+|||+++||.|+++ ++|||+|++++++|.|++ ++|+|+.+|+++ T Consensus 309 ~~~--~ddD~i~~~~~~~~~~~i~~~v~~~-~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~vg~~v 384 (681) T protein:vir:98 309 LPV--RDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTT 384 (681) T ss_pred CCC--CCCccEEEEEcCCcceeEEEEEecC-cEEEEEcCcEEEEecCCCccccceeEEEEEeeeecc-ccccceeeCCeE Confidence 864 6999999999999999999999985 7999999999999873 699999999999999987 579999999999 Q ss_pred EEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCC-CcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeE Q lcl|Aclame:pro 466 YFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-GVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQ 544 (801) Q Consensus 466 ~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v 544 (801) +|+|++|+ ++|||.|. +.+|+|+++|+|++++|++++ ++..++++++|+.++ |++++||+|++|+|+ +||+| T Consensus 385 ~fv~~~g~--~vre~~y~-~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p~~~~-~~v~~dg~l~~~ty~---~eq~v 457 (681) T protein:vir:98 385 IYGAARGG--HVRELAYN-WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIV-WFISSSGKLLGLTYV---PEQQI 457 (681) T ss_pred EEEecCCC--EEEEEEEe-eecCceeccchhhhhhhhcCCCCeEEEEEecCCCEEE-EEEecCCcEEEEEEe---cccce Confidence 99999995 58888764 567899999999999999987 788888888876665 667789999999996 78889 Q ss_pred EeEEeeecCCCeEEEEEE--EcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeecccccccccccee Q lcl|Aclame:pro 545 QSWSHWDFGDNVTVFAAQ--VINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTS 622 (801) Q Consensus 545 ~aW~~w~~~g~~~~~~~~--~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~ 622 (801) +|||||+++|.+++||+. ..+|.||++|+|++++..++|+|++++......+..+|+||+..+.+.. T Consensus 458 ~aW~~~~~~g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~----------- 526 (681) T protein:vir:98 458 GAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEP----------- 526 (681) T ss_pred eeEEEEecCCcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcc----------- Confidence 999999999999999975 3479999999999999999999999987766777889999987765321 Q ss_pred eccccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceee Q lcl|Aclame:pro 623 ISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTAT 702 (801) Q Consensus 623 ~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~ 702 (801) ...++||+|++|+++.+++||.+++..++.+|+ |.++.++++|+|||+|+++++++||+++.+++.+ T Consensus 527 --~~~~sgl~~leG~tv~i~aDG~~~~~~~V~~G~-------itl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~---- 593 (681) T protein:vir:98 527 --VSHISGLEHLEGKTVSILADGAVHPQRVVTDGA-------IDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFG---- 593 (681) T ss_pred --eeeeccccCCCCcEEEEEeCCeecCcEeecCcE-------EEeCcCCceEEEeeeceeEEEecceeeecCCccc---- Confidence 124789999999999999999999999888874 4556789999999999999999999998665432 Q ss_pred eeeeeEEEEEEEEEeeccccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEe-ecCceEEEEEEECCcC Q lcl|Aclame:pro 703 EDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVV-GNAQTNLVTIESDAST 781 (801) Q Consensus 703 ~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-~~~~~~~v~i~~~~P~ 781 (801) ..++++|+|+.|++++|+++.+.++....++...+.+.++ ...++++||++++|+. +|+++.+|+|+|++|+ T Consensus 594 -~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~~~~~~------g~~~~l~TG~~~v~v~~~~~~~~~v~I~qd~Pl 666 (681) T protein:vir:98 594 -QGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPY------GSPPALKSEEIPLVLSPKWGDSGQLFVRQADPL 666 (681) T ss_pred -CCceEEEEEEEEEEEcccceEEeeCCCceEEEEEeccccc------cccCCccCCeEEEEeCCCcCcceEEEEEECCCc Confidence 3456799999999999999999887655444433333322 3346889999999986 6899999999999999 Q ss_pred CEEEEEEEEEEEEec Q lcl|Aclame:pro 782 PLNIIGCGWEGNYLR 796 (801) Q Consensus 782 P~tvlsi~~eg~y~~ 796 (801) ||+|+||+||-...- T Consensus 667 P~tvlsi~~ev~vgg 681 (681) T protein:vir:98 667 PLMIVSMSAEIAIGA 681 (681) T ss_pred CEEEEEeeEEEEeeC Confidence 999999999999888 No 22 >protein:vir:107802 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1673 # MgeName: BIP-1 # Cross-refs: genbank:acc:NP_996623;genbank:gi:45580757;genbank:GeneID:2767878 Probab=100.00 E-value=4.2e-157 Score=877.91 Aligned_cols=662 Identities=11% Similarity=0.111 Sum_probs=492.0 Q ss_pred Ccceeeechhhhcc-----cccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~ 75 (801) |++++.+++||.+| +.+|.|++||+++|++|+||++.|+||++||||++||+++++++ ...|+++|.++++| T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~---~~~rlipf~~~~~~ 77 (681) T protein:vir:10 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSA---KKVRLIPFTYSVTQ 77 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCC---CcEEEEEEEeCCCc Confidence 99999999999999 67999999999999999999999999999999999999998763 35689999999999 Q ss_pred EEEEEEeCCeEEEEeCCCeEEE----EecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEE Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQ----VRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDAL 151 (801) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~~----v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (801) +|||||++++||||..+|.++. ++...| +++.++.+|+|+|+||+|||+|++|||+++.|.++..| ...++.+ T Consensus 78 ~~~l~~g~~~~r~~~~~~~~~~~~~~~~~~tp--y~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W-~l~~~~f 154 (681) T protein:vir:10 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANP--YAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNW-QLATIAF 154 (681) T ss_pred eEEEEEeCCeEEEEeCCcEEeeCcEeEEecCC--CChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCce-EEEEEEe Confidence 9999999999999987665532 222333 45667899999999999999999999999999887553 2222211 Q ss_pred EEecCCCccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEe Q lcl|Aclame:pro 152 INVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILA 231 (801) Q Consensus 152 ~~v~~g~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~ 231 (801) ..+.... .++ +++...++.. .+.. .++.+ T Consensus 155 --~~~p~~p--~~~-----------~at~~~~~~~----------------------~t~~--------------~~v~a 183 (681) T protein:vir:10 155 --TSPVATP--TSV-----------TATSNNKGTD----------------------YTYR--------------YVVTA 183 (681) T ss_pred --ccccccc--eee-----------eeeccCCccc----------------------eeEe--------------EEEEE Confidence 1111000 000 0000000000 0000 00000 Q ss_pred CCCceeEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEe Q lcl|Aclame:pro 232 PNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLY 311 (801) Q Consensus 232 ~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~ 311 (801) .+..... +.......+ .+. ..+ ..+....+.++...+...|.+. ....+.|.- ++......+. T Consensus 184 vda~t~~--~s~~~~~~t----vt~--~~~-------~~~~~~t~~w~a~~g~~~~~V~-~~~~gi~g~-ig~~~~~~~~ 246 (681) T protein:vir:10 184 LDAEGKT--ESAPSSAGT----CTN--NLF-------TNGGANTIAWSASSGASRYNVY-KEQGGLYGY-IGQTTGTSLV 246 (681) T ss_pred eecccce--eecCCcceE----Eee--eee-------cCCcceeEEEEecCCceeeeec-ccceeEEEE-eeccceeeee Confidence 0000000 000000000 000 000 0111111222222232233221 122233322 2222222221 Q ss_pred cCcceEEEEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEe----cCCEEEEEecCCccccccc Q lcl|Aclame:pro 312 YHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFL----SGENIILSRTSKYFNFFPA 387 (801) Q Consensus 312 ~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~----~~~~v~~S~~gd~~nF~~~ 387 (801) ...+ .+......+ +....++-.++||++|+||||||+|+ +||+|||||+|||+||+++ T Consensus 247 ~~~~-----------------~~~~~~t~~-~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~ 308 (681) T protein:vir:10 247 DDNI-----------------APDLSVTPP-IYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYS 308 (681) T ss_pred eccc-----------------ccCcccccc-ccccccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCccccccc Confidence 1111 111111111 11223444678999999999999999 4899999999999999999 Q ss_pred cCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeeccccCCCcEEeCCeE Q lcl|Aclame:pro 388 SVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTAS--GILSSRSVELNLTTQFDVQDRARPHGVGRNV 465 (801) Q Consensus 388 t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v 465 (801) +++ .|||||++++++.+++.|+|+++++ +|+|||+++||.|+++ ++|||+|++++++|.|++ ++|+|+.+|+++ T Consensus 309 ~~~--~ddD~i~~~~~~~~~~~i~~~v~~~-~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~vg~~v 384 (681) T protein:vir:10 309 LPV--RDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTT 384 (681) T ss_pred CCC--CCCccEEEEEcCCcceeEEEEEecC-cEEEEEcCcEEEEecCCCccccceeEEEEEeeeecc-ccccceeeCCeE Confidence 864 6999999999999999999999985 7999999999999873 699999999999999987 579999999999 Q ss_pred EEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCC-CcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeE Q lcl|Aclame:pro 466 YFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-GVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQ 544 (801) Q Consensus 466 ~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v 544 (801) +|+|++|+ ++|||.|. +.+|+|+++|+|++++|++++ ++..++++++|+.++ |++++||+|++|+|+ +||+| T Consensus 385 ~fv~~~g~--~vre~~y~-~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p~~~~-~~v~~dg~l~~~ty~---~eq~v 457 (681) T protein:vir:10 385 IYGAARGG--HVRELAYN-WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIV-WFISSSGKLLGLTYV---PEQQI 457 (681) T ss_pred EEEecCCC--EEEEEEEe-eecCceeccchhhhhhhhcCCCCeEEEEEecCCCEEE-EEEecCCcEEEEEEe---cccce Confidence 99999995 58888764 567899999999999999987 788888888876665 667789999999996 78889 Q ss_pred EeEEeeecCCCeEEEEEE--EcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeecccccccccccee Q lcl|Aclame:pro 545 QSWSHWDFGDNVTVFAAQ--VINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTS 622 (801) Q Consensus 545 ~aW~~w~~~g~~~~~~~~--~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~ 622 (801) +|||||+++|.+++||+. ..+|.||++|+|++++..++|+|++++......+..+|+||+..+.+.. T Consensus 458 ~aW~~~~~~g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~----------- 526 (681) T protein:vir:10 458 GAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEP----------- 526 (681) T ss_pred eeEEEEecCCcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcc----------- Confidence 999999999999999975 3479999999999999999999999987766777889999987765321 Q ss_pred eccccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceee Q lcl|Aclame:pro 623 ISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTAT 702 (801) Q Consensus 623 ~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~ 702 (801) ...++||+|++|+++.+++||.+++..++.+|+ |.++.++++|+|||+|+++++++||+++.+++.+ T Consensus 527 --~~~~sgl~~leG~tv~i~aDG~~~~~~~V~~G~-------itl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~---- 593 (681) T protein:vir:10 527 --VSHISGLEHLEGKTVSILADGAVHPQRVVTDGA-------IDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFG---- 593 (681) T ss_pred --eeeeccccCCCCcEEEEEeCCeecCcEeecCcE-------EEeCcCCceEEEeeeceeEEEecceeeecCCccc---- Confidence 124789999999999999999999999888874 4556789999999999999999999998665432 Q ss_pred eeeeeEEEEEEEEEeeccccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEe-ecCceEEEEEEECCcC Q lcl|Aclame:pro 703 EDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVV-GNAQTNLVTIESDAST 781 (801) Q Consensus 703 ~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-~~~~~~~v~i~~~~P~ 781 (801) ..++++|+|+.|++++|+++.+.++....++...+.+.++ ...++++||++++|+. +|+++.+|+|+|++|+ T Consensus 594 -~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~~~~~~------g~~~~l~TG~~~v~v~~~~~~~~~v~I~qd~Pl 666 (681) T protein:vir:10 594 -QGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPY------GSPPALKSEEIPLVLSPKWGDSGQLFVRQADPL 666 (681) T ss_pred -CCceEEEEEEEEEEEcccceEEeeCCCceEEEEEeccccc------cccCCccCCeEEEEeCCCcCcceEEEEEECCCc Confidence 3456799999999999999999887655444433333322 3346889999999986 6899999999999999 Q ss_pred CEEEEEEEEEEEEec Q lcl|Aclame:pro 782 PLNIIGCGWEGNYLR 796 (801) Q Consensus 782 P~tvlsi~~eg~y~~ 796 (801) ||+|+||+||-...- T Consensus 667 P~tvlsi~~ev~vgg 681 (681) T protein:vir:10 667 PLMIVSMSAEIAIGA 681 (681) T ss_pred CEEEEEeeEEEEeeC Confidence 999999999999888 No 23 >protein:vir:107423 Length: 681 # NCBI annotation: Bbp13 # Family: family:all:780 # MgeID: mge:1537 # MgeName: BPP-1 # Cross-refs: genbank:acc:NP_958682;genbank:gi:41179374;genbank:GeneID:2717217 Probab=100.00 E-value=4.2e-157 Score=877.91 Aligned_cols=662 Identities=11% Similarity=0.111 Sum_probs=492.0 Q ss_pred Ccceeeechhhhcc-----cccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~ 75 (801) |++++.+++||.+| +.+|.|++||+++|++|+||++.|+||++||||++||+++++++ ...|+++|.++++| T Consensus 1 m~~~~~~~~~f~~Ge~~p~l~~r~D~~~y~~~~~~~~N~~~~~~G~~~~R~g~~~~~~~~~~~---~~~rlipf~~~~~~ 77 (681) T protein:vir:10 1 MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSA---KKVRLIPFTYSVTQ 77 (681) T ss_pred CcceeEeeeecCCceeeeeeccchhHHHHHHHHHHhcCcEEEecCCceecChhHhhhhcCCCC---CcEEEEEEEeCCCc Confidence 99999999999999 67999999999999999999999999999999999999998763 35689999999999 Q ss_pred EEEEEEeCCeEEEEeCCCeEEE----EecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEE Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQ----VRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDAL 151 (801) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~~----v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (801) +|||||++++||||..+|.++. ++...| +++.++.+|+|+|+||+|||+|++|||+++.|.++..| ...++.+ T Consensus 78 ~~~l~~g~~~~r~~~~~~~~~~~~~~~~~~tp--y~~~~l~~l~~~q~aD~~~i~h~~~~p~~L~r~~~~~W-~l~~~~f 154 (681) T protein:vir:10 78 TMVIELGAGYFRFHTNGGTLLDGAVPYEIANP--YAEADLFNIHYVQSADVLTLVHPNYAPRELRRLGATNW-QLATIAF 154 (681) T ss_pred eEEEEEeCCeEEEEeCCcEEeeCcEeEEecCC--CChhhhcCceEEEEcCEEEEECCCCcceEEEEccCCce-EEEEEEe Confidence 9999999999999987665532 222333 45667899999999999999999999999999887553 2222211 Q ss_pred EEecCCCccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEe Q lcl|Aclame:pro 152 INVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILA 231 (801) Q Consensus 152 ~~v~~g~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~ 231 (801) ..+.... .++ +++...++.. .+.. .++.+ T Consensus 155 --~~~p~~p--~~~-----------~at~~~~~~~----------------------~t~~--------------~~v~a 183 (681) T protein:vir:10 155 --TSPVATP--TSV-----------TATSNNKGTD----------------------YTYR--------------YVVTA 183 (681) T ss_pred --ccccccc--eee-----------eeeccCCccc----------------------eeEe--------------EEEEE Confidence 1111000 000 0000000000 0000 00000 Q ss_pred CCCceeEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEe Q lcl|Aclame:pro 232 PNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLY 311 (801) Q Consensus 232 ~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~ 311 (801) .+..... +.......+ .+. ..+ ..+....+.++...+...|.+. ....+.|.- ++......+. T Consensus 184 vda~t~~--~s~~~~~~t----vt~--~~~-------~~~~~~t~~w~a~~g~~~~~V~-~~~~gi~g~-ig~~~~~~~~ 246 (681) T protein:vir:10 184 LDAEGKT--ESAPSSAGT----CTN--NLF-------TNGGANTIAWSASSGASRYNVY-KEQGGLYGY-IGQTTGTSLV 246 (681) T ss_pred eecccce--eecCCcceE----Eee--eee-------cCCcceeEEEEecCCceeeeec-ccceeEEEE-eeccceeeee Confidence 0000000 000000000 000 000 0111111222222232233221 122233322 2222222221 Q ss_pred cCcceEEEEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEe----cCCEEEEEecCCccccccc Q lcl|Aclame:pro 312 YHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFL----SGENIILSRTSKYFNFFPA 387 (801) Q Consensus 312 ~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~----~~~~v~~S~~gd~~nF~~~ 387 (801) ...+ .+......+ +....++-.++||++|+||||||+|+ +||+|||||+|||+||+++ T Consensus 247 ~~~~-----------------~~~~~~t~~-~~~~~~~~~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~ 308 (681) T protein:vir:10 247 DDNI-----------------APDLSVTPP-IYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYS 308 (681) T ss_pred eccc-----------------ccCcccccc-ccccccccCCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCccccccc Confidence 1111 111111111 11223444678999999999999999 4899999999999999999 Q ss_pred cCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeeccccCCCcEEeCCeE Q lcl|Aclame:pro 388 SVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTAS--GILSSRSVELNLTTQFDVQDRARPHGVGRNV 465 (801) Q Consensus 388 t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v 465 (801) +++ .|||||++++++.+++.|+|+++++ +|+|||+++||.|+++ ++|||+|++++++|.|++ ++|+|+.+|+++ T Consensus 309 ~~~--~ddD~i~~~~~~~~~~~i~~~v~~~-~lli~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~-~~~~Pv~vg~~v 384 (681) T protein:vir:10 309 LPV--RDDDRVAFRVAAREANAIRHIVPLT-ELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGA-TDVQPVVVNNTT 384 (681) T ss_pred CCC--CCCccEEEEEcCCcceeEEEEEecC-cEEEEEcCcEEEEecCCCccccceeEEEEEeeeecc-ccccceeeCCeE Confidence 864 6999999999999999999999985 7999999999999873 699999999999999987 579999999999 Q ss_pred EEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCC-CcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeE Q lcl|Aclame:pro 466 YFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-GVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQ 544 (801) Q Consensus 466 ~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v 544 (801) +|+|++|+ ++|||.|. +.+|+|+++|+|++++|++++ ++..++++++|+.++ |++++||+|++|+|+ +||+| T Consensus 385 ~fv~~~g~--~vre~~y~-~~~d~~~~~dlt~~a~Hl~~~~~i~~~a~~~~p~~~~-~~v~~dg~l~~~ty~---~eq~v 457 (681) T protein:vir:10 385 IYGAARGG--HVRELAYN-WQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIV-WFISSSGKLLGLTYV---PEQQI 457 (681) T ss_pred EEEecCCC--EEEEEEEe-eecCceeccchhhhhhhhcCCCCeEEEEEecCCCEEE-EEEecCCcEEEEEEe---cccce Confidence 99999995 58888764 567899999999999999987 788888888876665 667789999999996 78889 Q ss_pred EeEEeeecCCCeEEEEEE--EcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeecccccccccccee Q lcl|Aclame:pro 545 QSWSHWDFGDNVTVFAAQ--VINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTS 622 (801) Q Consensus 545 ~aW~~w~~~g~~~~~~~~--~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~ 622 (801) +|||||+++|.+++||+. ..+|.||++|+|++++..++|+|++++......+..+|+||+..+.+.. T Consensus 458 ~aW~~~~~~g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~----------- 526 (681) T protein:vir:10 458 GAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEP----------- 526 (681) T ss_pred eeEEEEecCCcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcc----------- Confidence 999999999999999975 3479999999999999999999999987766777889999987765321 Q ss_pred eccccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceee Q lcl|Aclame:pro 623 ISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTAT 702 (801) Q Consensus 623 ~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~ 702 (801) ...++||+|++|+++.+++||.+++..++.+|+ |.++.++++|+|||+|+++++++||+++.+++.+ T Consensus 527 --~~~~sgl~~leG~tv~i~aDG~~~~~~~V~~G~-------itl~~~~~~v~VGl~Y~s~i~~lp~~~~~~~g~~---- 593 (681) T protein:vir:10 527 --VSHISGLEHLEGKTVSILADGAVHPQRVVTDGA-------IDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFG---- 593 (681) T ss_pred --eeeeccccCCCCcEEEEEeCCeecCcEeecCcE-------EEeCcCCceEEEeeeceeEEEecceeeecCCccc---- Confidence 124789999999999999999999999888874 4556789999999999999999999998665432 Q ss_pred eeeeeEEEEEEEEEeeccccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEe-ecCceEEEEEEECCcC Q lcl|Aclame:pro 703 EDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVV-GNAQTNLVTIESDAST 781 (801) Q Consensus 703 ~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~-~~~~~~~v~i~~~~P~ 781 (801) ..++++|+|+.|++++|+++.+.++....++...+.+.++ ...++++||++++|+. +|+++.+|+|+|++|+ T Consensus 594 -~g~~~ri~rv~lr~~~S~g~~~~~~~~~l~~~~~~~~~~~------g~~~~l~TG~~~v~v~~~~~~~~~v~I~qd~Pl 666 (681) T protein:vir:10 594 -QGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPY------GSPPALKSEEIPLVLSPKWGDSGQLFVRQADPL 666 (681) T ss_pred -CCceEEEEEEEEEEEcccceEEeeCCCceEEEEEeccccc------cccCCccCCeEEEEeCCCcCcceEEEEEECCCc Confidence 3456799999999999999999887655444433333322 3346889999999986 6899999999999999 Q ss_pred CEEEEEEEEEEEEec Q lcl|Aclame:pro 782 PLNIIGCGWEGNYLR 796 (801) Q Consensus 782 P~tvlsi~~eg~y~~ 796 (801) ||+|+||+||-...- T Consensus 667 P~tvlsi~~ev~vgg 681 (681) T protein:vir:10 667 PLMIVSMSAEIAIGA 681 (681) T ss_pred CEEEEEeeEEEEeeC Confidence 999999999999888 No 24 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=100.00 E-value=2.1e-155 Score=868.59 Aligned_cols=714 Identities=11% Similarity=0.082 Sum_probs=499.6 Q ss_pred Ccceeeechhhhcc-----cccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~ 75 (801) |+ ++..++||.+| +.+|.|++||++||++|+||+++|+||++||||++||+.+++++ ...++++|.++++| T Consensus 1 m~-~~~~q~sF~~GElsP~l~gR~Dl~~y~~g~~~~~N~~~~p~Gg~~rRpGt~fva~~~~~~---~~~rLipF~fs~~q 76 (825) T protein:vir:73 1 MA-FSWIQPSFAGGEIGPSLYGRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYPD---RKCRLIPFQFSTVQ 76 (825) T ss_pred Cc-cceeccccccceechhhcccchHHHHHHHHHHhcCcEEEecCCceecCchHHhHhhcCCC---CCEEEEEEEeCCCc Confidence 76 55778999999 78999999999999999999999999999999999999987653 45689999999999 Q ss_pred EEEEEEeCCeEEEEeCCCeEEE-----EecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccE Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQ-----VRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDA 150 (801) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~~-----v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (801) +|+|+|++++||||..+|.++. ++...+| ++.++.+|+++|++|+|||+|+++||+++.|.++..| ...+.. T Consensus 77 ~y~Lefg~~~lrv~~~gg~v~~~~~~~~e~~TPy--~~~~l~~l~~~QsaD~~~i~h~~~pp~~L~r~~~~~W-~l~~~~ 153 (825) T protein:vir:73 77 TYALEFGHNYMRVIKDGAYVLTTSNVIYELAMPY--ADTDLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNW-QIVDVT 153 (825) T ss_pred EEEEEEeCCeEEEEeCCceEeccCCceEEEeccc--chhhhhhheeeeecCEEEEEcCCCceeEEEEecCCCc-EEEEEe Confidence 9999999999999998775431 2233343 5557899999999999999999999999999887543 222222 Q ss_pred EEEecCCCccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccc-----eEEEECCc Q lcl|Aclame:pro 151 LINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNK-----WRFNVGPG 225 (801) Q Consensus 151 ~~~v~~g~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~-----~~~~~~~~ 225 (801) +...+....+...++++. +++.......+.+.+.... ...+.......... |....... T Consensus 154 f~~gp~~~in~~~sv~v~---------asg~tg~~TiTaS~a~~~~-------~~vG~~i~~~~~~v~si~~~~~~~~~~ 217 (825) T protein:vir:73 154 TKNGPFEDINVDETVKVY---------ASASTGTITLTASSAIFGA-------EQVGKLFYLEQPAVDSVPVWETSKTTA 217 (825) T ss_pred ccCCccccccccccceee---------ecccCceeEEEeeccccCc-------hhcCeEEEEecccccccceeeeeeEEE Confidence 211111111111122211 1111111111111110000 00000000000000 00000000 Q ss_pred eEEEEeCCCceeEEEEeecCCCccceeeeeeecccceeccceeeCCeEE-EeeccCCCccceeEEEEccCceeEEEeecc Q lcl|Aclame:pro 226 FIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIV-KIVGDTSKTADQYYVRFDLNRKVWVETIGW 304 (801) Q Consensus 226 ~~~i~~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v-~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~ 304 (801) ...+... ++..+..... ....++++.+..|... .+.+........-|.....+.|.++....+ T Consensus 218 ~~~v~~~-~~~~~~~~~~---------------~~~~t~~~~a~~g~~~~~~~g~~~~~~~~~~~~~~~~~g~~~it~~~ 281 (825) T protein:vir:73 218 INDVRRA-DSNYYRANTS---------------GKTGTLRPSHTEGMSWDGWGGTGSDDTGIQWEYLHSGFGIAKITAVA 281 (825) T ss_pred eeeEEEC-CCceeeeecc---------------cccceeeccccCCceeEeeeeecccCCceEEEEEecCCceEEEeecc Confidence 0000000 0011111100 1111222233333221 111111111111111122334444433322 Q ss_pred ceeeEEe---cCcceEEEEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEe----cCCEEEEEe Q lcl|Aclame:pro 305 NTRTHLY---YHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFL----SGENIILSR 377 (801) Q Consensus 305 ~~~~~~~---~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~----~~~~v~~S~ 377 (801) +...... ...+|+.+++.+++++++....|.++ ++||++|+||||||+|+ +|++||||| T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~--------------~gyPs~v~f~q~RL~f~g~~~~p~~v~~Sr 347 (825) T protein:vir:73 282 GDGLTATADVVSFIPSQVVGSANASYKWAKYAWNSV--------------NGYPSTVVYYQQRLYFAASTAYPQTIWASR 347 (825) T ss_pred ccceeeccccceecccccccCCCCCcccccCCcccC--------------CCCccEEEEEcceEEEeecCCCCCEEEEEc Confidence 2111111 11245555666666666666666543 47899999999999999 589999999 Q ss_pred cCCccccccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeeccccC Q lcl|Aclame:pro 378 TSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTAS--GILSSRSVELNLTTQFDVQDR 455 (801) Q Consensus 378 ~gd~~nF~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~ 455 (801) +||||||++++++ .|||||+++++++++|.|+|+++++ +|+|||+++||+|+++ ++|||+|++++++|.|+++ + T Consensus 348 tgd~~nF~~~~~~--~DdD~I~~~~s~~~~~~i~~~~~~~-~L~~~t~~~e~~l~~~~~~~lTP~~~~~~~~s~~g~~-~ 423 (825) T protein:vir:73 348 TGDYKDFGKNNPI--QDDDRIIYTYAGRQVNEIRHLIDVG-NLVALTSGGEYTISGDQNKVLTPSAFSFSSQGNNGSS-N 423 (825) T ss_pred cCCccccccCCCC--CCCccEEEEEcCCcceeEEEEeecC-cEEEEecCceEEEecCCCcccceeeEEEEeeeeeccc-c Confidence 9999999999864 6999999999999999999999985 8999999999999875 6999999999999999875 6 Q ss_pred CCcEEeCCeEEEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCC-CcEEEEEeCCCCeEEEEEEcCCCeEEEEE Q lcl|Aclame:pro 456 ARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-GVFSISGTTAENFAAILTSGAPNRVYIYK 534 (801) Q Consensus 456 ~~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~~~t 534 (801) ++|+.+|++++|+|++|+ +++||.|. +.+++|.++|+|+|++||+++ .+.+++++++|+.++ |+.++||+|++|+ T Consensus 424 ~~Pv~vg~~~~Fv~~~g~--~vre~~~~-~~~d~~~~~dlt~~a~hl~~~~~~~~~a~~~~p~~~~-~~v~~dg~l~~~t 499 (825) T protein:vir:73 424 VPPIAVANIALFIQEKGS--VVRDLAYS-FDVDGYQGTDLTILANHLFQKHSIVDWSFCIVPYSSA-FCIRDDGKLLVLT 499 (825) T ss_pred ccceEeCCeEEEEeCCCC--eEEEEEEe-eecCceeccchhhhhHhhccCCceEEEEEcCCCceEE-EEEecCCeEEEEE Confidence 999999999999999884 68999765 567999999999999999997 677778888777665 6677899999999 Q ss_pred EEecCCceeEEeEEeeecCCCeEEEEEEE--cCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccc Q lcl|Aclame:pro 535 FLYIDEEIRQQSWSHWDFGDNVTVFAAQV--INSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAG 612 (801) Q Consensus 535 y~~~~~e~~v~aW~~w~~~g~~~~~~~~~--~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~ 612 (801) |+ +||+|.|||||+++|+|+++|+.. .+|+||++|+|+++++.+||+|+|++......++.+||||+..|++... T Consensus 500 y~---~~q~v~aW~~~~~~g~v~~~~~i~~~~~D~l~~iV~R~~~g~~~~yiE~~~~~~~~~~~~~~~vD~g~~~~g~~~ 576 (825) T protein:vir:73 500 YL---RDQQVFAWAPQSSAGKYESTCSISEGSEDAVYFVVNRTINGQTVRYIERLSSRLFTNDEDAFFVDCGLSYDGRNT 576 (825) T ss_pred Ee---ccccceeeEEEecCCcEEEEEEecCCCccEEEEEEEEeeCCceEEEEEEecccccCCCcceeEEEEEeeecccce Confidence 97 788899999999999999999854 3689999999999999999999999988888889999999887753110 Q ss_pred cc---------------------------ccc---cc------------------------------c------------ Q lcl|Aclame:pro 613 TY---------------------------NDD---TY------------------------------Q------------ 620 (801) Q Consensus 613 t~---------------------------~~~---~~------------------------------~------------ 620 (801) .. ... .. . T Consensus 577 ~~~l~~l~g~tv~~~~~g~~~~~v~~g~itl~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~v~~~~~~~ 656 (825) T protein:vir:73 577 SSRTMTISGGTGDWSYQVDYPVTVSGGAYFVNTDVGAQIQFPYTGTDPDTNEPVAKELRGDIISVTSNTAVVVRFNRNVP 656 (825) T ss_pred eeceeeeCCceEEEEeCCeEEEEEcCCeEEecccceEEEEecccCcccccccceeceeeEEEccccCceEEEEEeccccc Confidence 00 000 00 0 Q ss_pred --------eeec--cccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCee Q lcl|Aclame:pro 621 --------TSIS--LATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFL 690 (801) Q Consensus 621 --------~~~~--~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~ 690 (801) +.+. ...++||+||||++|.+++||.+++..+|.+|.+ .++.+++.|||||+|+++++++||+ T Consensus 657 a~~~~~~~t~~~~a~~~~~gL~hLeG~~v~v~~Dg~~~~~~~V~~G~v-------tl~~~~~~v~vGl~y~~~~~~l~~~ 729 (825) T protein:vir:73 657 PVLRNVATTNWQMARQTFSGLAHLEGQTVNILSDASVEPQKTVTGGAV-------TLESPGAVVHIGLPITAEFETLDIN 729 (825) T ss_pred ceeeeecccCCCcchheeccccccCCceEEEEECCeeeCCeEecCcEE-------EecCCceEEEEeeCccceEEecccc Confidence 0000 0134899999999999999999999999988843 3336899999999999999999998 Q ss_pred EEecCCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCcccccccccccccccccccccccccccEEEEEE-eecCc Q lcl|Aclame:pro 691 IKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPV-VGNAQ 769 (801) Q Consensus 691 ~~~~~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~-~~~~~ 769 (801) +.. .|. ....++||+++.++|++|.++.+..+...-++... +.. ..+...|+++||++++++ .+|++ T Consensus 730 ~~~---~g~---~~g~~~ri~~~~~~~~~s~~~~~g~~~~~l~~~~~---r~~---~~~~~~~~~~tG~~~~~~~~~~~~ 797 (825) T protein:vir:73 730 ING---QET---LLDKKQVIPTVTMVVNASRGIWATTPGGTWYEYPQ---REF---EFYDDPVDDATGKVEVKLDSNWDK 797 (825) T ss_pred cCC---Ccc---ccCccEEEEEEEEEEEeeeeEEEecCCCcceEeec---cCC---CcccCCCccccCcEEEecCCCCCC Confidence 742 222 22345789999999999999998754332222221 211 223445689999999987 68999 Q ss_pred eEEEEEEECCcCCEEEEEEEEEEEEecc Q lcl|Aclame:pro 770 TNLVTIESDASTPLNIIGCGWEGNYLRR 797 (801) Q Consensus 770 ~~~v~i~~~~P~P~tvlsi~~eg~y~~r 797 (801) +++|+|+|++|||||||||..|...+-= T Consensus 798 ~~~~~i~q~~PlP~tvlav~~~~~~~g~ 825 (825) T protein:vir:73 798 NGRVKVRQLDPLPLSVLAVLPRLTVGGF 825 (825) T ss_pred ccEEEEEEcCCCCEEEEEEEEEEEecCC Confidence 9999999999999999999988775544 No 25 >protein:vir:102644 Length: 594 # NCBI annotation: Hypothetical protein # Family: family:all:780 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024422;genbank:gi:48696643;genbank:GeneID:2948111 Probab=100.00 E-value=6.3e-135 Score=756.33 Aligned_cols=560 Identities=12% Similarity=0.062 Sum_probs=450.4 Q ss_pred Ccceeeechhhhcc-----cccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCc Q lcl|Aclame:pro 1 MALISQSIKNLKGG-----ISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFE 75 (801) Q Consensus 1 Ma~v~~~~~~~~~G-----vsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~ 75 (801) |+++. ++||++| +.+|.|++||+++|++|+||++.|+||++||||++|+++++++ ....|+++|.++++| T Consensus 1 m~~~~--~~~F~~GelsP~l~~r~Dl~~y~~~~~~~~n~~~~~~G~~~rR~G~~~~~~~~~~---~~~~~lipF~~s~~~ 75 (594) T protein:vir:10 1 MADFS--QTSFKGGVIAPRLQFNEYESAYHHSIEDAVNFVVTEQGSLITRCGSEEVGLCQDG---EVRLFRLPAVDAPSN 75 (594) T ss_pred Cceee--ccccCcceecceeccchhHHHHHHHHhhhhceEEEecCCeecCChhHhhhhccCC---CCCEEEEEEEeCCCC Confidence 99977 8999999 6799999999999999999999999999999999999998765 345799999999999 Q ss_pred EEEEEEeCCeEEEEeCCCeEEEEecCCcccc----c---CCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCc Q lcl|Aclame:pro 76 QYFVVFTGEDIKVFDLDGKEYQVRGDRSYVR----T---ANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQG 148 (801) Q Consensus 76 ~y~l~~~~~~~rv~~~~g~~~~v~~~~~y~~----t---~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~ 148 (801) +|+|||+++++|||..+|.+....+..++.. + ..++.+|+|+|++|++|++|++++|+++.|.++..|- T Consensus 76 ~~~le~g~~~~r~~~~~~~~v~~~~~~~~~~~tp~~~t~~~~l~~i~~tqsad~~~~~~~~~~p~~L~R~~~~~w~---- 151 (594) T protein:vir:10 76 DVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGRLIMVHPALQPKRLYRDNNNAWQ---- 151 (594) T ss_pred eEEEEEcCCeEEEEecCcEEEEccCCCcccccccceeeccCCccceEEEEEeeEEEEEcCCCCceEEEEccCCCce---- Confidence 9999999999999988776655444433321 1 2357789999999999999999999999986542210 Q ss_pred cEEEEecCCCccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEE Q lcl|Aclame:pro 149 DALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIH 228 (801) Q Consensus 149 ~~~~~v~~g~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 228 (801) + T Consensus 152 --~----------------------------------------------------------------------------- 152 (594) T protein:vir:10 152 --F----------------------------------------------------------------------------- 152 (594) T ss_pred --E----------------------------------------------------------------------------- Confidence 0 Q ss_pred EEeCCCceeEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceee Q lcl|Aclame:pro 229 ILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRT 308 (801) Q Consensus 229 i~~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~ 308 (801) ...+... .+ T Consensus 153 ------------~~~~~~~--------------------~p--------------------------------------- 161 (594) T protein:vir:10 153 ------------VNMHTGA--------------------VP--------------------------------------- 161 (594) T ss_pred ------------EecccCc--------------------cc--------------------------------------- Confidence 0000000 00 Q ss_pred EEecCcceEEEEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEec----CCEEEEEecCCcccc Q lcl|Aclame:pro 309 HLYYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS----GENIILSRTSKYFNF 384 (801) Q Consensus 309 ~~~~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~----~~~v~~S~~gd~~nF 384 (801) .+|. ..+||++|+||||||+|++ |++|||||+|||+|| T Consensus 162 -----------------------~~~~---------------~~~~p~~v~f~q~RL~f~~~~~~p~~v~~Srtgd~~nF 203 (594) T protein:vir:10 162 -----------------------AEWS---------------PSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDI 203 (594) T ss_pred -----------------------cccc---------------CCccceEEEEEeeeEEEEeCCCCCceEEEEeccccccc Confidence 0000 0268899999999999998 679999999999999 Q ss_pred ccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeeccccCCCcEEeC Q lcl|Aclame:pro 385 FPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTAS--GILSSRSVELNLTTQFDVQDRARPHGVG 462 (801) Q Consensus 385 ~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg 462 (801) ++++++ .|||||++.+ +++.+ +.|+++++++|+|||+++||+|+++ ++|||+|++++++|.+ +++.|+|+.+| T Consensus 204 ~~~~~~--~ddd~i~~~~-s~~~~-~~~~v~~~~~L~i~t~~~e~~l~~~~~~~lTp~~~~~~~~s~~-g~~~~~P~~vg 278 (594) T protein:vir:10 204 APSTAN--NPNDPISFVG-IMEGT-PCWIIASSDVLTIGTTINDYQLAASTGVSVTAATAILRRSSVQ-GTAAVQGIPAE 278 (594) T ss_pred ccCCCC--CCCccEEEEE-ecccc-eEEEEecCCceEEEecCceEEEecCCCcccccceEEEEEeeee-ccCCCcceeeC Confidence 999976 5999999954 45555 4556778889999999999999875 5899999999999976 56789999999 Q ss_pred CeEEEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcC-------CCcEEEEEeCCCCeEEEEEEcCCCeEEEEEE Q lcl|Aclame:pro 463 RNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIP-------NGVFSISGTTAENFAAILTSGAPNRVYIYKF 535 (801) Q Consensus 463 ~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty 535 (801) +.++|+|++|+ ++|||.|. +.+++|+++|||+|++|+++ +++.+++++++|+.++ |++++||.|.+++| T Consensus 279 ~~~~fv~~~g~--~vre~~y~-~~~d~y~~~dlt~~a~hl~~~~~~~~~~~i~~~a~~~~p~~~~-~~v~~dG~l~~~ty 354 (594) T protein:vir:10 279 EQVIFCSRNKS--KVYAMNYV-REQDNWIPDEMSSQAQHLFTPISSAKGASVRRVAYISDAAKSL-WVVLENGQINYCCF 354 (594) T ss_pred CeEEEEcCCCC--EEEEEEEe-eccCceeccchhhhhhhhcCccccccCceEEEEEEecCCceEE-EEEeCCCeEEEEEE Confidence 99999999985 68888765 56799999999999999974 5788889888887765 67778999999999 Q ss_pred EecCCceeEEeEEeeec-CCCeEEEEEEE--cCCEEEEEEEeC--CCEEEEEE--EEeecCCCCCcCcceeeeeeeeEEe Q lcl|Aclame:pro 536 LYIDEEIRQQSWSHWDF-GDNVTVFAAQV--INSTMTVLMGNE--HAVWMGRL--HFTKNSIDIPGEPYRLYIDAKRKYT 608 (801) Q Consensus 536 ~~~~~e~~v~aW~~w~~-~g~~~~~~~~~--~~d~l~~vv~r~--~~~~~~r~--~~~~~~~~~~~~~~~~~lD~~~~~~ 608 (801) + +||+|.|||||++ +|.|+++|+.. .+|++|++|+|. .++..+++ +|++++....+....+|+|+..++. T Consensus 355 ~---~eq~v~aWs~~~~t~G~v~~va~i~~~~~d~l~~~V~R~~ti~g~~~~y~~lE~~~~~~~~~~~~~~~~d~~~~~~ 431 (594) T protein:vir:10 355 D---RTTDTKAWTQLELSGGKVIDIAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQN 431 (594) T ss_pred e---cccceeeeEeeccCCCcEEEEEEeecCCCCEEEEEEEECCccccceeeEEEeecCCCccccccccceeeeeccccc Confidence 5 8899999999995 78999999853 579999999995 57777776 6788776656666678888865542 Q ss_pred eccccccccccceeeccccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCC Q lcl|Aclame:pro 609 IPAGTYNDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSK 688 (801) Q Consensus 609 ~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~ 688 (801) . .++||+||||+++.+++||..++..++.+|.+ ++...++.++++|+|||+|+++++++| T Consensus 432 ~-----------------~vsgl~hLeg~tv~v~aDG~~~~~~~V~~g~i---tL~~~~~~~~~~v~VGl~Y~s~i~~lp 491 (594) T protein:vir:10 432 G-----------------DVLNLDRYIGRTAVIFSKYGLEAEVEVNNIGL---THRINGYDPNTVYYVGYKMDSYFRTLT 491 (594) T ss_pred c-----------------eeecccccCCceEEEEeCCeecCCeEEcCCee---EeeccCCCCcceEEEeeeeeEEEEeec Confidence 1 25789999999999999999999888877643 344567889999999999999999999 Q ss_pred eeEEecCCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCcccccccccccccccccccccccccccEEE--EEEee Q lcl|Aclame:pro 689 FLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYR--FPVVG 766 (801) Q Consensus 689 ~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~--vp~~~ 766 (801) |++..+. | +...+|+||++++|+|.+|++++++.+.......... ......+..+.|++++|+.. +++.| T Consensus 492 ~~~~~~~--g---s~~g~r~ri~r~~v~~~~S~g~~vg~~~~~~r~~~~~---~~~~~~~~~g~~~~~tg~~~v~~~~~G 563 (594) T protein:vir:10 492 PSNGDMK--K---SMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTDDI---MDARLLDFSSNSGSSNGTRLVDYNPLG 563 (594) T ss_pred ccccCCc--c---cccCccEEEEEEEEEEEcceeeEECCcccccccchhh---ccccCCcccCcccccCCceEEEEccCC Confidence 9987443 2 3445589999999999999999987554322111111 11123345566777777654 45678 Q ss_pred cCceEEEEEEECCcCCEEEEEEEEEEEEecc Q lcl|Aclame:pro 767 NAQTNLVTIESDASTPLNIIGCGWEGNYLRR 797 (801) Q Consensus 767 ~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r 797 (801) |+++.+|+|+|++|||||||||.+|...++- T Consensus 564 ~~~~~~i~I~qd~PlPltvlai~~ev~~~~~ 594 (594) T protein:vir:10 564 WENDGKMVIAVEQPFLCEVVGVFSVVQSNKV 594 (594) T ss_pred cCcccEEEEEECCCcCEEEEEEEEEEEeccC Confidence 9999999999999999999999999999999 No 26 >protein:vir:80177 Length: 1027 # NCBI annotation: tail tubular protein B # Family: family:all:12083 # MgeID: mge:1878 # MgeName: Pf-WMP3 # Cross-refs: genbank:acc:YP_001285795;genbank:gi:148747829;genbank:GeneID:5220453 Probab=99.55 E-value=4.9e-14 Score=93.54 Aligned_cols=745 Identities=15% Similarity=0.110 Sum_probs=295.5 Q ss_pred Ccc----ee------eechhhhccc--ccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEE Q lcl|Aclame:pro 1 MAL----IS------QSIKNLKGGI--SQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHL 68 (801) Q Consensus 1 Ma~----v~------~~~~~~~~Gv--sqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~ 68 (801) |-. -+ +...+=.+|+ +..+=..-|. +--.+.|+=.+..|-+.||.|++.+..-..+. ..+.++ T Consensus 1 mvnsferrtQQ~~dlG~~s~~F~GL~~t~S~~~IP~~-~SP~~~N~DV~~~G~V~kR~GT~i~~~Y~~t~----~~~t~~ 75 (1027) T protein:vir:80 1 MVNSFERRTQQGDDLGIRSSNFGGLNTTASPLNIPYE-DSPNLLNVDVDVSGNVSKRQGTEILLKYANTT----PVYTFP 75 (1027) T ss_pred CCcchhhhhcccccccccccccccccccccccccccc-CCCceEEeecccCcceeehhhhhhhhhhccCC----ceeeee Confidence 210 00 2222233442 2221111111 22346789999999999999999996544322 223444 Q ss_pred EEcCCCcEEEEEEeCCeEEEEeCCCeE----EEEec--CCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccc-- Q lcl|Aclame:pro 69 INRDEFEQYFVVFTGEDIKVFDLDGKE----YQVRG--DRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVN-- 140 (801) Q Consensus 69 ~~~~~~~~y~l~~~~~~~rv~~~~g~~----~~v~~--~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~-- 140 (801) +.---.-.|+|--..|-+.+.-.+|+. +.+.. ....|. -.+-. +-.--.-|.+.|..+.+||-.+.-... T Consensus 76 vks~LG~dYvLt~~~GLL~~~~~~~~AVG~~K~~s~V~~aa~~~-V~P~F-~~~S~~~~R~LILT~~~~~VQ~~F~E~T~ 153 (1027) T protein:vir:80 76 VKSVLGYDYVLTKSGGLLEVAGVIGKAVGAYKSFSNVFSAAAAN-VKPYF-TLLSDVEPRVLILTGTNTPVQVKFVEQTF 153 (1027) T ss_pred ehhhccceeeEecCCceEEEeeecccccccchhhhhhhhhhhcc-cCcee-EEccCCCCcEEEEcCCCceEEEEEeeeee Confidence 332222235444333333333222221 11111 111110 00100 011123366777777777654322211 Q ss_pred -cCCCCCCccEE-EEecCCCc--------------------cceEEEEeCCceeEeeeeecccccccceee--chHHHHH Q lcl|Aclame:pro 141 -LPGFKDQGDAL-INVRGGQY--------------------GRRLSIEFNGAERAAVQLPDGSQPAHVNEV--DGQAIAE 196 (801) Q Consensus 141 -~~~~~~~~~~~-~~v~~g~y--------------------~~~y~vti~~~~ta~~~tp~~s~~~~~~~~--~~~~ia~ 196 (801) .+-..+...++ -+....+| ++.|.+++.. .|+-+-.-.-+-. .-.|.|+ T Consensus 154 t~T~~s~~~~~V~~~~s~~~~~~~~L~~~~N~tS~~~~~~~~T~~AlT~~N-------lP~~S~~mt~~~V~~~W~WWAE 226 (1027) T protein:vir:80 154 TTTSGSPTTTVVIPNASRFQYDTPILYMNRNFTSGATYSYNSTTRALTISN-------LPSWSGSMTFDLVLPVWSWWAE 226 (1027) T ss_pred eeeccCCccceEeecccceeecCeeEEecccccceeEeeccceEEEEEecc-------CCcceeEEEEeEEecchhhhhh Confidence 11111111111 11111122 2222222211 1221110000000 1122333 Q ss_pred HHHhhhh---hcccceeee------eecc-------ceE--EEECCceEEEEeCCCcee-EEEEeec------CC-Cccc Q lcl|Aclame:pro 197 KLAAQLR---NNLGNPNND------QDPN-------KWR--FNVGPGFIHILAPNNDNV-WGLQTKD------GY-ADQL 250 (801) Q Consensus 197 ~l~~~~~---a~~~~~~~~------~~~~-------~~~--~~~~~~~~~i~~~~~~~~-~t~t~~d------g~-~~t~ 250 (801) .|.=.-. .+.-.++.. .+.. ... ....+-.++..+.-+++. +.-+++. |. ++-. T Consensus 227 Sl~~~G~~~~~~~SRFNV~~~DQ~V~IP~~L~sDlD~i~~~~~~~~m~~~~ta~F~~~~~~~~T~~P~~AD~YG~~~G~~ 306 (1027) T protein:vir:80 227 SLRWFGDRFYDAVSRFNVNKADQSVAIPAALRSDLDTIQGTYGRYPMLLYKTATFNDTYTFSNTGQPANADSYGWGDGSV 306 (1027) T ss_pred HHhhhhhHHHhhhhhcccccccccccchhHHhhhhhhhhhccCCccEEEEEeeeecCceeecCCCCCCCcccccccCCce Confidence 2211000 000000000 0000 000 000001111111111110 0000000 00 0000 Q ss_pred eeeeeeecccceeccceeeCCe------------------EEEeeccCCCccceeEEEEccCceeEE--Ee-eccceeeE Q lcl|Aclame:pro 251 INPVTHYTQSFQKLPINAPDGY------------------IVKIVGDTSKTADQYYVRFDLNRKVWV--ET-IGWNTRTH 309 (801) Q Consensus 251 ~~~~~~~v~~~~~lp~~~~~g~------------------~v~i~~~~~~~~~~yyv~~~~~~~~W~--e~-~~~~~~~~ 309 (801) ..... .. -...-|.-..-|. .++-..-.++..++.-|.-+...-.|. .+ ++-.+... T Consensus 307 ~~~~~-~A-~L~~sPFF~TFG~~~t~TP~P~~~V~lLR~RELRFN~G~GA~~~~L~V~~D~~~~s~N~ssT~~~T~R~~~ 384 (1027) T protein:vir:80 307 YNVGA-SA-YLNTSPFFATFGDTRTPTPQPPETVHLLRQRELRFNYGNGATGANLRVTVDGTALSANYSSTVAGTNRAYA 384 (1027) T ss_pred Eeecc-cc-eeeccceEEEeccccCCCCCchhheeeeeeeeeeeccCCCCCCcceEEEEcceeeeeeeeeeeeecceeEE Confidence 00000 00 0000011111111 122223334444555554444444443 22 22223332 Q ss_pred Eec--------CcceEEEE---Ee--------cCCeEEeecc--CcCccccCCcccccCc------------cccCCCce Q lcl|Aclame:pro 310 LYY--------HTMPWALV---RA--------SDGNFDFKVL--EWGARTVGDDTTNPYP------------SFTGQTIN 356 (801) Q Consensus 310 ~~~--------~t~p~~lv---~~--------~~~t~~~~~~--~w~~~~~gd~~s~p~p------------sf~g~~p~ 356 (801) +.. ++....++ +. +..++.-... -|.+.+-.|.-...-- .-.|+.|+ T Consensus 385 L~~A~G~~~~~A~dlayY~A~~GATPL~IS~~aA~t~~~~~R~yi~~~~~~T~~~~~~G~Y~k~YGlG~~~~Y~~~~F~~ 464 (1027) T protein:vir:80 385 LYKADGTLCTSASDLAYYIAFTGATPLGISPTAAVTITNVDRTYIGSAATQTDNAYVQGGYFKVYGLGLWANYGTGQFPR 464 (1027) T ss_pred EeeeccccccccccceeeeeeeccccccccccceeeeecCceeeeeeeccccCCceEeeeEEEEEEeeeeeecCCccccc Confidence 211 11111011 00 0001000000 0211111110000000 11245688 Q ss_pred EEEEEcCeeEEec----CCEEEEEecCC------cccccc-ccCCCCCCCccEEEEEcCCcc-eEEEEEeecCCcEEEEe Q lcl|Aclame:pro 357 DIFFFRNRLGFLS----GENIILSRTSK------YFNFFP-ASVSNYSDDDPIDVAVSHNRV-STLKYAVPFSEELLLWS 424 (801) Q Consensus 357 ~v~f~q~RL~~~~----~~~v~~S~~gd------~~nF~~-~t~~~~~d~d~i~~~~~~~~~-~~i~~~~~~~~~L~~~t 424 (801) -.+.||.||++.+ |..|.+|.+|| ++||+. +..+...|.||+++.++|.|. +.|.-++..++.|++|| T Consensus 465 I~TvY~~RLvL~~~t~~~~~~~~S~~GD~~~~G~~Y~F~QvTD~L~G~~sDPF~L~VsSsq~~d~vT~~~~WQ~~LFV~T 544 (1027) T protein:vir:80 465 IATVYQSRLVLGGFTNDPTRVVFSATGDTVEGGVKYNFFQVTDDLDGLDSDPFDLVVSSSQADDYVTGLVEWQSSLFVLT 544 (1027) T ss_pred eeeeeeeeeEEeccCCCcceEEEeecCCcccCceeeeeeeeehhhccCcCCceeEEEecccccceeeeeeeeceeEEEEe Confidence 8999999999997 66899999987 899984 455778899999999998664 45888999999999999 Q ss_pred cCcEEEEeCCcc-ccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhc Q lcl|Aclame:pro 425 DQAQFVLTASGI-LSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYI 503 (801) Q Consensus 425 ~~~q~~~~~~~~-lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~ 503 (801) .++-|.+.|++. ++|..-.++.+|+|+.-+.-.-|+....|+|.++.| ++.+.. .-..++|.+.+-|+.+.++| T Consensus 545 ~~~T~~~~GGd~t~~~a~~~VN~iSs~G~~N~~~VV~T~~~V~Yl~~~G----~F~L~~-r~~~~~Y~A~EkSiKIR~~F 619 (1027) T protein:vir:80 545 RRATFRANGGDATISPARRFVNYISSLGLVNPFSVVRTDTAVFYLSDSG----VFNLTP-RVEDGEYQAIEKSIKIRKVF 619 (1027) T ss_pred cceeEEeecCccccchhHHHHHHHHhhcccCcceEEEeeeEEEEeeccc----eeeccC-CccCCcchhhhhhhhhhhhh Confidence 999999998876 999999999999998777777788899999999977 677654 34568999999999999988 Q ss_pred CCCcEEEEEeCCCCeEEEEE-EcCCCeEEEEEEEecCCceeE-----------EeEEeeecCCCeEEEEE-----EEcCC Q lcl|Aclame:pro 504 PNGVFSISGTTAENFAAILT-SGAPNRVYIYKFLYIDEEIRQ-----------QSWSHWDFGDNVTVFAA-----QVINS 566 (801) Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~-~~~~g~l~~~ty~~~~~e~~v-----------~aW~~w~~~g~~~~~~~-----~~~~d 566 (801) ..-. .+.-+...|+. ..+.+.||+ -|..+.|..+ .+|+..+..|.|+.-.. .+..+ T Consensus 620 ~~~~-----~ta~~~~~Wm~~~q~~~~LYv--~L~~~~eT~~~S~~~~~N~~~DSWt~~~t~~~Fk~YtghP~V~~~~~~ 692 (1027) T protein:vir:80 620 GKTT-----STAVSSAAWMSFDQNRKVLYV--ALPRGSETTVASALYVYNTFRDSWTQYDTLGGFKTYTGHPYVDTVLGD 692 (1027) T ss_pred hhhc-----cccccceeeeeeccCCceEEE--EecCCCcchhhhhhhhhhhhhcchhhhhcccCcccccCCchhhhhhhh Confidence 5421 12222222221 112223322 2323322222 27888888887764321 11234 Q ss_pred EEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeE----Eeeccccccccccc---eeeccccccCcccccceEE Q lcl|Aclame:pro 567 TMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRK----YTIPAGTYNDDTYQ---TSISLATIYGMNFTKGRVS 639 (801) Q Consensus 567 ~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~----~~~~~~t~~~~~~~---~~~~~~~~~gl~~l~g~~v 639 (801) ...+.+..+...++.+... +. --++|--|+.. .+...+-|+..... +.+.--.++|...+.-+.. T Consensus 693 s~L~~v~~~~TV~ML~~~~---~~-----YvDFF~~CG~~~~~Vlt~~~GIY~~~~P~wnsP~I~~~svs~tt~~~~q~Y 764 (1027) T protein:vir:80 693 SFLLMVAYGGTVCMLKLYG---SR-----YVDFFNKCGSFTGNVLTANSGIYTWTAPFWNSPVISNISVSGTTTLAVQRY 764 (1027) T ss_pred hhhhhhcCchhhhhhhhhc---ch-----hhhhhhhcccceeeEEecCCceeEeecccccCCeeeEEEeeccchhhhhee Confidence 3334444444444432211 10 00112222210 11111222211100 0000002334444444555 Q ss_pred EEecCCccccceeecccc--ccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEe Q lcl|Aclame:pro 640 VVFPDGKIIEVDQPINGW--SSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNY 717 (801) Q Consensus 640 ~~~~dG~~~~~~~~~~g~--~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~ 717 (801) .--.|..+.+...+.+-. +.++. +..|-+..- +--.+++..+.++++..++. -|+-+++ T Consensus 765 e~~T~~~vvpydnvedlsiyvnGT~-----------Ls~~~~~~~--~~~~i~LL~~~~~~~~~s~V------prcpvnv 825 (1027) T protein:vir:80 765 ELPTDLQVVPYDNVEDLSIYVNGTR-----------LSFGTDWVK--QGKAIYLLSDPGDGKTVSIV------PRCPVNV 825 (1027) T ss_pred ccccccccccccccccceeeeccee-----------EeecCchhh--cCCEEEEecCCCCcceEEEE------ecccccc Confidence 545555555554443321 11222 222222111 11234556566666555543 3444443 Q ss_pred eccccEEEEeCCCCccccccccccccccccccccccc-----ccccEEEE----------EEe--------ecCceEEEE Q lcl|Aclame:pro 718 EDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSN-----IGTGQYRF----------PVV--------GNAQTNLVT 774 (801) Q Consensus 718 ~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~tg~~~v----------p~~--------~~~~~~~v~ 774 (801) ..-|..... .......++.-...+.+.++...|.-+ +....+.+ ||. ++-...-+. T Consensus 826 sy~~~~~~~-~TT~~TV~~N~~~~iQ~Tdy~~~GS~L~~~~~LtN~~~~~G~~Y~S~Y~SP~F~L~SL~~LKk~K~~~L~ 904 (1027) T protein:vir:80 826 SYQGDVTFD-ETTAQTVWVNNLLQIQGTDYTLSGSTLTFTDTLTNAVVEVGNAYISYYQSPMFLLGSLSNLKKVKHVYLY 904 (1027) T ss_pred ccccccccc-ccccceEEecceeeeccceeeeccCccccccccccceEEEeecchhhhcchhhhhhhhhhhhheeeeEEE Confidence 322221110 011111222211122222222111111 11122221 110 011222333 Q ss_pred EEECCcCCEEEEEEEEEEEEecc-----ccCC Q lcl|Aclame:pro 775 IESDASTPLNIIGCGWEGNYLRR-----SSGI 801 (801) Q Consensus 775 i~~~~P~P~tvlsi~~eg~y~~r-----~rr~ 801 (801) .-..+-||.--++=--.|+=..- --|- T Consensus 905 ~Dnedvlpvytigdlasgqdvddlvgkwktra 936 (1027) T protein:vir:80 905 FDNEDVLPVYTIGDLASGQDVDDLVGKWKTRA 936 (1027) T ss_pred EcCCcceeeeeeccccCCCchhHhhhhhcccc Confidence 33444444322221111110000 0000 No 27 >protein:vir:94602 Length: 1012 # NCBI annotation: PfWMP4_35 # Family: family:all:12083 # MgeID: mge:1525 # MgeName: Pf-WMP4 # Cross-refs: genbank:acc:YP_762665;genbank:gi:115304373;genbank:GeneID:5142302 Probab=99.55 E-value=1.3e-12 Score=85.79 Aligned_cols=771 Identities=13% Similarity=0.117 Sum_probs=319.9 Q ss_pred Ccc-----eeeechhhhccc--ccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcC- Q lcl|Aclame:pro 1 MAL-----ISQSIKNLKGGI--SQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRD- 72 (801) Q Consensus 1 Ma~-----v~~~~~~~~~Gv--sqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~- 72 (801) |-. +++...+=.+|+ |..+-..-|. +--...|+=.+..|-+.||.|+..+..-.- +......+.+++.-- T Consensus 1 mtqQQ~~eiqG~~t~~F~GL~~s~S~~~IP~~-~SP~~~N~DV~~~G~V~rR~GT~l~~~Y~i-nn~s~~~~s~~irt~L 78 (1012) T protein:vir:94 1 MTQQQATEIQGPFTREFSGLDISNSVGAIPVS-GSPVFHNCDVSDDGAVVRRRGTALVNTYNI-NNASGRAWSDTIRTKL 78 (1012) T ss_pred CCcccccccccccccccccccccccccccccc-CCCceEEeecccCcceeehhhhhhhhhhcc-cccCcceeeeeehhhc Confidence 432 333444444553 2222111121 233567999999999999999999865431 111223344444322 Q ss_pred CCcEEEEEEeCCeEEEEeCCCe----EEEEe--cCCcccccCCCccceeEEE---EcCEEEEecCceeeeEeeccccc-- Q lcl|Aclame:pro 73 EFEQYFVVFTGEDIKVFDLDGK----EYQVR--GDRSYVRTANPREDLRMIT---VADYTFVTNRKVVVQSNDQSVNL-- 141 (801) Q Consensus 73 ~~~~y~l~~~~~~~rv~~~~g~----~~~v~--~~~~y~~t~~~~~~l~~~q---~~d~~~l~~~~~~~~~~~~~~~~-- 141 (801) +-++++|--..|-+.+.-.+|. .+.+. .....|.- +-+.+-|.- .-|.+.|..+.+||-.+.-...+ T Consensus 79 G~eYfiLs~~~GLL~~~~~~~~AVG~~K~~a~V~~ss~~~V--~Pssm~F~~~S~~~~R~LILT~~~~~VQ~~F~E~T~s 156 (1012) T protein:vir:94 79 GSEYFILSNDVGLLISLMRDDEAVGMPKEVAVVSKSSIWTV--PPSSMCFIPVSAPYDRLLILTPEHPIVQLSFLERTLS 156 (1012) T ss_pred cceeEEEecCCceEEEeeecccccccchhhhhhhhhhcccc--CCcceEEEeccCCCCcEEEEcCCCceEEEEEeeeeee Confidence 2333344433333333322222 12222 11111111 112333333 23677788777777544322211 Q ss_pred -CCCCCCccEE-EEecCCC--------------------ccceEEEEeCCce-----eEeeeeecccccccceeechHHH Q lcl|Aclame:pro 142 -PGFKDQGDAL-INVRGGQ--------------------YGRRLSIEFNGAE-----RAAVQLPDGSQPAHVNEVDGQAI 194 (801) Q Consensus 142 -~~~~~~~~~~-~~v~~g~--------------------y~~~y~vti~~~~-----ta~~~tp~~s~~~~~~~~~~~~i 194 (801) +-..+...++ -+..... .++.|.+++.... +.++..|. +..-...++...|. T Consensus 157 ~T~~t~~~~~V~~~~a~~~~~~~~L~~~~N~sS~~~~~~~~T~~AmT~~NP~~S~~ls~~~V~~q-tytltirqi~W~WW 235 (1012) T protein:vir:94 157 FTCTTNHGGGVFSFTAPISVNDTTLWRDTNASSYIVTDAAGTVYAMTQKNPDFSFRLSGSFVVGQ-TYTLTIRQITWQWW 235 (1012) T ss_pred eeccCCccceEeecccceeecCeeEEecccccceeEeeccceEEEEEeeCCceeEEEEEEEecCc-ccceeehhhhhhhh Confidence 1111111111 1111111 1334444442210 11111111 01111122222333 Q ss_pred HHHHHhhhh---hcccceeee-ee-----ccc-------eEEE--ECCceEEEEeCCCceeE-EEEeec------CCC-c Q lcl|Aclame:pro 195 AEKLAAQLR---NNLGNPNND-QD-----PNK-------WRFN--VGPGFIHILAPNNDNVW-GLQTKD------GYA-D 248 (801) Q Consensus 195 a~~l~~~~~---a~~~~~~~~-~~-----~~~-------~~~~--~~~~~~~i~~~~~~~~~-t~t~~d------g~~-~ 248 (801) |+.|.=.-. .+.-.++.. .+ ... ..-+ ..+-.++..+.-+++.| .-+++. |.+ + T Consensus 236 AESm~~~G~~~~~~~SRFNV~~~DQ~V~IP~~L~tDiD~v~~~~~~~~l~~~~ss~F~~~~~~~~T~~P~~AD~YG~~~G 315 (1012) T protein:vir:94 236 AESMYYEGQDMMQNTSRFNVTSIDQNVKIPDRLITDIDPVYKNSQGLGLFVFWSSRFDSNGWAGPTTSPNTADEYGFSGG 315 (1012) T ss_pred hhhHhhhhhHHHhhhhhcccccccccccchhHHhhhhhhhhhccCCccEEEEEeeeecCceeecCCCCCCCcccccccCC Confidence 333211000 000000000 00 000 0000 00011111111111110 000000 000 0 Q ss_pred -cceeeeeeecccceeccceeeCCe------------------EEEeeccCCCccceeEEEEccCceeEE---------- Q lcl|Aclame:pro 249 -QLINPVTHYTQSFQKLPINAPDGY------------------IVKIVGDTSKTADQYYVRFDLNRKVWV---------- 299 (801) Q Consensus 249 -t~~~~~~~~v~~~~~lp~~~~~g~------------------~v~i~~~~~~~~~~yyv~~~~~~~~W~---------- 299 (801) -+....-........-|.-..-|. .++-..-.++..++.-|.-+...-.|. T Consensus 316 ~~~tpp~~~~~A~L~~aPFF~TFG~~~s~TP~P~~~V~iLR~RELRFN~G~GA~~~~L~V~~D~~~~t~Nnvpfspsnfq 395 (1012) T protein:vir:94 316 GRFTPPSLVPGATLQAAPFFITFGGIYSGTPTPINQVNILRLRELRFNGGTGAKPDDLQVYNDTVEHTWNNVPFSPSNFQ 395 (1012) T ss_pred ceeccccccccceeeccceEEEeccccCCCCCChhheeeeeeeeeeeccCCCCCCcceEEEEcceeeeccccccCccccc Confidence 000000000000000011111111 122223334444555554444444444 Q ss_pred ---Eee-ccceeeEEecCc-------ceEEEEEecCC---------------eEEe-eccCcCccccCCcccccCcc--- Q lcl|Aclame:pro 300 ---ETI-GWNTRTHLYYHT-------MPWALVRASDG---------------NFDF-KVLEWGARTVGDDTTNPYPS--- 349 (801) Q Consensus 300 ---e~~-~~~~~~~~~~~t-------~p~~lv~~~~~---------------t~~~-~~~~w~~~~~gd~~s~p~ps--- 349 (801) .+. +-.+.+.+..+. .-..+.+.+++ ++.- ...-|.+.+-.+.-...--. T Consensus 396 t~atT~~~T~R~~~L~~A~G~~~~~A~Y~A~~GATnnlpanaPL~IS~~sA~s~~~~~R~v~~~~~~T~~~~~~G~Y~r~ 475 (1012) T protein:vir:94 396 TWATTYTATDRVITLMSAVGDRFNNANYFAILGATNNLPANAPLHISCLSASSYLGGSRRVWYRNLPTTGGTLDGCYVRA 475 (1012) T ss_pred ceeeeeeecceeEEEeeeccccccCcceEEEeecccccccCCccccccccceeeeccceeeeeeccccCCceEeeeEEEE Confidence 222 222333322110 01111111100 0000 00012111111000000000 Q ss_pred ---------ccCCCceEEEEEcCeeEEec----CCEEEEEecCC------cccccc-ccCCCCCCCccEEEEEcCCcceE Q lcl|Aclame:pro 350 ---------FTGQTINDIFFFRNRLGFLS----GENIILSRTSK------YFNFFP-ASVSNYSDDDPIDVAVSHNRVST 409 (801) Q Consensus 350 ---------f~g~~p~~v~f~q~RL~~~~----~~~v~~S~~gd------~~nF~~-~t~~~~~d~d~i~~~~~~~~~~~ 409 (801) -.|..|+-.+.||.||++.+ +..+.+|.+|| |+||+. +..+...|.||+++.++|.-.+. T Consensus 476 YGiG~~~~Y~~~~F~~I~TiY~~RLiL~~~s~~~~~~~~S~~GD~~~~G~~Y~F~QiTD~L~G~~tDPF~L~VtSe~~e~ 555 (1012) T protein:vir:94 476 YGIGKYVDYSKRSFHAIGTIYRDRLILVNPSTATDQLLISEIGDATVPGEFYQFMQITDMLQGVTTDPFTLNVTSEGRER 555 (1012) T ss_pred EEeeeeeecCCccccceeeeeeeeeEEeccCCCcceEEEeecCCcccCceeeeeeeeehhhccCcCCceeEEEcccccce Confidence 12455888899999999997 56799999987 899984 45577889999999999977788 Q ss_pred EEEEeecCCcEEEEecCcEEEEeCCccccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEEEeeecccccc Q lcl|Aclame:pro 410 LKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSV 489 (801) Q Consensus 410 i~~~~~~~~~L~~~t~~~q~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~ 489 (801) |..++..++.|++||.++-|.+.|++.++|..-.++.+|+|+.-+.---|+..-.|+|..+.| ++.+.. .-..++ T Consensus 556 iT~~~~WQ~~LFV~T~~~T~~~~GGe~~~~s~~~VN~vSt~G~~N~~~VV~T~~~V~Ym~~~G----~F~L~~-k~~~~~ 630 (1012) T protein:vir:94 556 ITAVTGWQKRLFVFTGSNTYSIEGGEQFGESSYAVNLVSTYGAFNQNCVVVTNLTVLYMNKFG----LFDLMN-KPNTDS 630 (1012) T ss_pred eeeeeeeceeEEEEeccceEeeccccccchhHHHHHhHHhhcccCcceEEEeeeEEEEeeccc----eeeccC-CccCCc Confidence 999999999999999999999999999999999999999998777677788899999999977 677654 345689 Q ss_pred eehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEE-EcCCCeEEEEEEEecCCceeE-----------EeEEeeecCCCeE Q lcl|Aclame:pro 490 KNAEDMTAHVPNYIPNGVFSISGTTAENFAAILT-SGAPNRVYIYKFLYIDEEIRQ-----------QSWSHWDFGDNVT 557 (801) Q Consensus 490 ~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~l~~~ty~~~~~e~~v-----------~aW~~w~~~g~~~ 557 (801) |.+.+-|..+.++|..- +.+.-+...|+. ..+.+.||+ =|..+.|..+ .+|+..+..|.|+ T Consensus 631 Y~A~ErSvKIR~~F~~~-----~~ss~~~~~Wl~~~e~~~~LYi--~L~~~~dT~~~S~~~~~N~~~DSWs~~~s~~~Fq 703 (1012) T protein:vir:94 631 YGAFERSVKIRGLFQNL-----AGSSGDNLHWLRYNESSNKLYI--GLAAEGDTRTTSRNLMLNFTWDSWSTLSSAAPFQ 703 (1012) T ss_pred chhhhhhhhhhhhhhhh-----ccccccceeeeeeccCCceEEE--EecCCCcchhhhhhhhhhhhhcchhhhhccCCcc Confidence 99999999999988541 122222222221 222233332 1222222211 2788877777765 Q ss_pred EEEE-E-EcCCEEEEEEEeCCCEEEEE-----EEEeecCCCCCcCcc--------------------------eeeeeee Q lcl|Aclame:pro 558 VFAA-Q-VINSTMTVLMGNEHAVWMGR-----LHFTKNSIDIPGEPY--------------------------RLYIDAK 604 (801) Q Consensus 558 ~~~~-~-~~~d~l~~vv~r~~~~~~~r-----~~~~~~~~~~~~~~~--------------------------~~~lD~~ 604 (801) .--. . +..+...+.+..+...++.+ |+ .++.+..-.-.+ -..+|-. T Consensus 704 ~YP~V~~~~~~t~L~~i~~~~TV~ML~~~~~~Yi-DFatirthiypF~~CaG~~~~~Vms~~~GIY~~~~P~tP~I~~~t 782 (1012) T protein:vir:94 704 MYPAVQLFKYMTWLTNINAPLTVAMLATEMPFYI-DFATIRTHIYPFTFCAGQRDVSVMSDSRGIYNLPLPVTPGILDYT 782 (1012) T ss_pred cchhhhhhhhhhhhhhhcCchhhhhhhhccceee-eeehhcccccceeeeccceeeEEEecCCceEEecccccceeeeeE Confidence 3211 0 11222222222222222211 11 011100000000 0112211 Q ss_pred eEEeeccc--cccccc---cce--eeccccc---cCc----ccccceEEEE-ecCCccccceeeccccc----------- Q lcl|Aclame:pro 605 RKYTIPAG--TYNDDT---YQT--SISLATI---YGM----NFTKGRVSVV-FPDGKIIEVDQPINGWS----------- 658 (801) Q Consensus 605 ~~~~~~~~--t~~~~~---~~~--~~~~~~~---~gl----~~l~g~~v~~-~~dG~~~~~~~~~~g~~----------- 658 (801) +..+...+ +|.-.+ +.. ++.-+.. ..+ +...++.+.+ +.||. .+..+....+. T Consensus 783 it~ss~~~~k~Yq~~T~~~GT~tLt~~~~~~~~~~~l~LL~~~~~~~~~a~V~~~~~-~~~TT~~TV~~N~~~~lQ~T~~ 861 (1012) T protein:vir:94 783 ITASSKAGAKTYQRNTASAGTETLTLRNPMMDYADTLELLGGNVNASQFAMVMSNGF-EPYTTYPTVTYNGVAPLQWTVT 861 (1012) T ss_pred eeccchhhhheeccccccccceeeeecChhhhcCcEEEEecCCCCccEEEEEeeccc-ccccccceEEecceeeeeEEEe Confidence 11100000 011000 000 0000000 000 0111222222 22221 11111110000 Q ss_pred cCcEEEEcCccc-CceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEeecc--ccEEEEeCCCCcccc Q lcl|Aclame:pro 659 SDPVLRLDGNQE-GQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDS--GAFTIRVNNLSREFI 735 (801) Q Consensus 659 ~~~~~~i~~~~~-~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~t--g~~~~~v~~~~~~~~ 735 (801) ++..+...--.+ ...+.+|.-|.+.++- |.+..+. .+.. +++.++.+.+.-+ ..++.++.......- T Consensus 862 ~GS~L~~~~~LsqN~~~~~G~~Y~S~Y~S-P~F~L~S------L~~L---Kr~K~~~L~~Dttvtsqlkynltsgfsqvs 931 (1012) T protein:vir:94 862 GGSGLNNRPILSQNNNCIMGMIYPSVYAS-PIFDLES------LGRL---KRLKKLHLQMDTTVTSQLKYNLTSGFSQVS 931 (1012) T ss_pred cCCccccccccccCceEEEeecchhhhcc-hhhhhhh------hhhh---hheeeeeEEeeeeeeeeeeeehhcccceee Confidence 001111100011 3568899999998875 3433311 1111 1344555544332 223322222111100 Q ss_pred ccccc-ccccccccccccccccc------------cEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEe--cc-cc Q lcl|Aclame:pro 736 YTMAG-ARLGSDNLRVGRSNIGT------------GQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYL--RR-SS 799 (801) Q Consensus 736 ~~~~~-~~~~~~~~~~~~~~~~t------------g~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~--~r-~r 799 (801) +-... ..+-+.++..-.|..++ -...+|+.|..-+.++.|.+-..-.+.+-+.+.+.+=- +| .| T Consensus 932 vlntawvavvsnynenivpavvsyqvgnsyeirrvvelsiplqgygcdyqfyiasvgaeafklaayefdiqpqrdkryvr 1011 (1012) T protein:vir:94 932 VLNTAWVAVVSNYNENIVPAVVSYQVGNSYEIRRVVELSIPLQGYGCDYQFYIASVGAEAFKLAAYEFDIQPQRDKRYVR 1011 (1012) T ss_pred eecceeeeeeeccCccccceeeeeecCCceeeeEEEEEeecccccccceeEeeeeccccceeeeeeeeccccchhhhhcc Confidence 00000 00001111111111111 23456888888889999999999999999988776532 22 22 Q ss_pred C Q lcl|Aclame:pro 800 G 800 (801) Q Consensus 800 r 800 (801) | T Consensus 1012 r 1012 (1012) T protein:vir:94 1012 R 1012 (1012) T ss_pred C Confidence 2 No 28 >protein:vir:2625 Length: 715 # NCBI annotation: gp27 # Family: family:all:5234 # MgeID: mge:55 # MgeName: SIO1 # Cross-refs: genbank:acc:NP_064766;genbank:gi:9964636;genbank:GeneID:1263056 Probab=98.86 E-value=2.5e-08 Score=62.28 Aligned_cols=632 Identities=13% Similarity=0.144 Sum_probs=281.1 Q ss_pred Ccc--eeeechhhhcccccCcchHhhh-chhhhhhcceeeecCCceeCCcceE-----eeeecCCCccccccEEEEEE-- Q lcl|Aclame:pro 1 MAL--ISQSIKNLKGGISQQPDILRFA-EQGSVQINGWSSESEGLQKRPPMIH-----LKTLGPAGYVGAQPYVHLIN-- 70 (801) Q Consensus 1 Ma~--v~~~~~~~~~Gvsqq~d~~r~~-~q~~~~~N~~~~p~gGl~rRpGt~~-----va~~~~~~~~~~~~~~~~~~-- 70 (801) ||+ -+-....|++|+=--.-++-|| +..-.-+||.....|--+||-|.-+ +..+.-.+ .. -+...+ T Consensus 1 m~~~~~~~~vNtFv~GliTEas~ltfpqnasiDe~N~~l~rdG~r~RR~g~~~E~~~vls~~~vp~--ga--lv~~~~W~ 76 (715) T protein:vir:26 1 MPQSLTQRTVNTFIKGLITEASELTFPENASVDELNCSLGRDGTRRRRKAVTLEDNHVLSDVVVPE--GA--LVQTLDWY 76 (715) T ss_pred CCcccchhHHhhhhhheeeccccccCCccceeeeeeeeecCCCcchhhccceeecceEEEEEeecC--ce--eeeeechh Confidence 997 3345667999954333344444 3445678999999998889988754 33321111 11 111111 Q ss_pred --cCCCcEEEEEEeC-CeEEEEeCCCeE-------EEEecCCccc-ccCCCcc-ceeEEEEcCEEEEecCceeeeEeecc Q lcl|Aclame:pro 71 --RDEFEQYFVVFTG-EDIKVFDLDGKE-------YQVRGDRSYV-RTANPRE-DLRMITVADYTFVTNRKVVVQSNDQS 138 (801) Q Consensus 71 --~~~~~~y~l~~~~-~~~rv~~~~g~~-------~~v~~~~~y~-~t~~~~~-~l~~~q~~d~~~l~~~~~~~~~~~~~ 138 (801) -+.-...|+++.. ..+.+|...+.. .++....-+- .-.-|.. .++++.+..++.|+||..-+-.+.-- T Consensus 77 na~G~v~~~~livqvg~~l~f~q~t~~pLs~~n~~~svdl~~~~~~vn~SPsh~~v~v~~~~G~livanp~i~~~~~~~d 156 (715) T protein:vir:26 77 NVAGQVNLEFLVVQVNNILYFYEKSTDPLSANKYSGSVDLNTHSASNNLSPSEERVQVTSLNGYLIVASPAINTFYLGFN 156 (715) T ss_pred hcccccCcEEEEEEeccEEEEEeccCCccccCceeEEeeecceecccccccceeEEEEEEeeeEEEEecCCccEEEEEec Confidence 1223356666664 457777765522 1222211110 0011222 57788889999999999887655432 Q ss_pred cccCCCCCCccEEEEecCCCccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccce Q lcl|Aclame:pro 139 VNLPGFKDQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKW 218 (801) Q Consensus 139 ~~~~~~~~~~~~~~~v~~g~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~ 218 (801) +.+..+.+. . +-++--++. .+|+.. .+.+ -..+...... .++.-+..+. +| T Consensus 157 ~~t~s~t~~-~--ll~r~r~f~------~qg~d~---~~g~-~y~~~gt~~t---------n~~iynlyN~-------gw 207 (715) T protein:vir:26 157 TSTEAFTAT-S--ISFKERDFE------WQGSDV---DVTS-LYFGEGTSVS---------NQRIYDTYNV-------GW 207 (715) T ss_pred CCcceeEee-E--EEEEeeehe------eecccc---cccc-ccccCCcccC---------chhheecccc-------ee Confidence 211111100 0 111111111 011000 0000 0000000000 0111111111 11 Q ss_pred EEEECCceEEEEeCCCceeEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeE Q lcl|Aclame:pro 219 RFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVW 298 (801) Q Consensus 219 ~~~~~~~~~~i~~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W 298 (801) . .+.++++......--....-+.- .+ +++.++. ..+.-.| T Consensus 208 ~--~p~gt~~~N~~~~yiVypa~s~~-----------------------~~-------S~kd~n~--------afsk~ad 247 (715) T protein:vir:26 208 V--GPKGSAALNTYGSYIVYPALTHP-----------------------WY-------SGKDANG--------AFNKADW 247 (715) T ss_pred e--cceeEEEEcCCCCceEecccccc-----------------------cC-------CCccccc--------ccChhhc Confidence 1 11111211111000000000000 00 0000000 0000011 Q ss_pred EEeeccceeeEEecCcceEEEEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEec------CCE Q lcl|Aclame:pro 299 VETIGWNTRTHLYYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS------GEN 372 (801) Q Consensus 299 ~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~------~~~ 372 (801) .|-- -|. +. .+.|-|.+..-.=...-+-.+.+ .+.|+|++.|.+|.+|++ +.. T Consensus 248 ~ei~-tGt-------~~------~~~G~yi~D~~~~g~~~leeev~-------k~R~rsv~~yaGrV~yagiD~dkng~r 306 (715) T protein:vir:26 248 LEIY-TGS-------SL------ASNGHYVLDVFNKARTGLTTEVE-------TGRFRSVAAYAGRVFYAGIDSAKNGGK 306 (715) T ss_pred cccc-ccc-------cc------ccCceEEEeeeecCCccchhhhh-------cCCCcceeeecceEEEeecccccCCCe Confidence 1100 000 00 00000000000000000000000 356788999999999995 448 Q ss_pred EEEEecCC--------ccccccccC--CCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCC-ccccccc Q lcl|Aclame:pro 373 IILSRTSK--------YFNFFPASV--SNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTAS-GILSSRS 441 (801) Q Consensus 373 v~~S~~gd--------~~nF~~~t~--~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~-~~lTP~~ 441 (801) |.+||.=| |.+=++++. ..+.|.|...+.+-+.- .|.-|+.++..|+||...+.|+|.|. ..+|.++ T Consensus 307 ilfSqLv~s~~di~nCyQd~DPTsee~~dLidTDGg~iri~gah--~ii~Lv~f~~sLlvf~~NGVWAi~G~d~g~tATd 384 (715) T protein:vir:26 307 VYFSRLTERMSDVGNCYQVNDPTSEVLSDLLDTDGGVVRIPDAH--NIRKLHVLGASLLVFAENGVWAVAGVDNVFRATE 384 (715) T ss_pred EEEehhhcchhhcccccccCCCchhhhhhhhhcCCCEEEecCCC--CceeEEEecceEEEEEecceEEEeccCCceeeee Confidence 99998643 333333322 23567888888876543 36668999999999999999999764 4799999 Q ss_pred eEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEEEeeecccccceehhhHH-HHHHHhcCCC---cEEE---EEeC Q lcl|Aclame:pro 442 VELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMT-AHVPNYIPNG---VFSI---SGTT 514 (801) Q Consensus 442 ~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls-~~~~~~~~~~---~~~~---~~~~ 514 (801) ..+..+++.+|++.=.-|++|+.++|-.++| |+.+...+ ...-+.++.|| ..|..|...= .+.- .+-. T Consensus 385 Y~ltKIs~vg~sspnSvVvv~~~i~~WsdtG----Iyal~~Nd-~fn~~tAqNLTekTIq~~~~~I~~dk~knVtg~fd~ 459 (715) T protein:vir:26 385 YAITRISDVGLSNENSFVVADGIPIWWGKTG----IYAVQQSE-NLNTPTAQNLSLSTIQTLWNNISNAKKAQVTVEYDK 459 (715) T ss_pred eEEEEeeeeccCCCccEEEecceEEEeeCCc----EEEEEecc-ccCcchhhccchHHHHHHHhhcchhhhcceEEEEEc Confidence 9999999999999888899999999999987 67766554 23568999999 7788776441 1111 2334 Q ss_pred CCCeEEEEEEcCCCeEEEEEEEecCCcee-----EEeEEeeecC---CCeEE-EEE----------------------EE Q lcl|Aclame:pro 515 AENFAAILTSGAPNRVYIYKFLYIDEEIR-----QQSWSHWDFG---DNVTV-FAA----------------------QV 563 (801) Q Consensus 515 ~~~~~~~~~~~~~g~l~~~ty~~~~~e~~-----v~aW~~w~~~---g~~~~-~~~----------------------~~ 563 (801) -++.+.|+..+ ..++.=|+| .+-. ..|+.+|..+ |..-+ ++. .- T Consensus 460 ~e~rVyW~yPn-~dt~vdyky----d~vLV~dLalgaFYp~~v~~~a~~~~~~ig~~~~~~~~~~~t~~~vv~~~~v~~~ 534 (715) T protein:vir:26 460 INQRVFWFYPD-NDESVDYKY----NNILVMDLALQAFYPWRVEDEASSTSYIIGTSYYGGLGSTSTETQVVNGADVVVN 534 (715) T ss_pred cCCEEEEEEcC-Cceeeceee----cCeEEEEecccccccccccccccccceeeeeeeeCCcccccchhheeccceEEEe Confidence 44555554443 456655555 1111 1255555432 22111 110 00 Q ss_pred cCCEEEEEEEeCCC-EEEE-EEEEeecC---CCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccccceE Q lcl|Aclame:pro 564 INSTMTVLMGNEHA-VWMG-RLHFTKNS---IDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRV 638 (801) Q Consensus 564 ~~d~l~~vv~r~~~-~~~~-r~~~~~~~---~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~ 638 (801) +++.+..+..|.-- +-.+ .++++..+ ..+....++-|||.+. .. ..+|. ..| T Consensus 535 g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~dw~s-~d--~~~~~------------~~g-------- 591 (715) T protein:vir:26 535 GSDNVVATLYRDYLEGDSEIKLLVRDGTTGKMTFATFRGDTYLDWGS-AD--YKSFA------------EAG-------- 591 (715) T ss_pred ccceEEEEeecccccccceEEEEEEcCCceeEEEecccCceeeeccc-cc--hhhHH------------Hhh-------- Confidence 12222222222110 0000 11111111 1112223334555432 00 00000 001 Q ss_pred EEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEee Q lcl|Aclame:pro 639 SVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYE 718 (801) Q Consensus 639 v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~ 718 (801) +.+.|....+..+ +.-+.| ++++ -.=++. ++.|=......+-|+ ...++.. T Consensus 592 --y~~~gd~~~~k~~----------------pyvt~~------~~~t-edg~v~--~~~g~~p~n~sSclm--~~sw~ws 642 (715) T protein:vir:26 592 --YDFMGDITTFKNA----------------PYVTTY------MRVT-EDGYVA--SGAGYEFINPSSCLM--SVSWNLS 642 (715) T ss_pred --hhhcccceeeecC----------------ceEEEE------EEEe-ccccee--ccCCccccCCcceEE--EEEeeec Confidence 1111111111000 000000 0000 000111 011111111111111 1122222 Q ss_pred ccccEEEEeCCCCcccccccccccccccccccccc-cccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEEEecc Q lcl|Aclame:pro 719 DSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRS-NIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGNYLRR 797 (801) Q Consensus 719 ~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r 797 (801) +++ .-..+.|.+..+++..+.+....- |-.+-+-...++|..+..+++|++..--.++|++.++-|--|+. T Consensus 643 ~s~--------st~~eaYk~~~~~~~~p~~~s~~~yp~~~VvTKsriRG~Gr~~~~rf~s~~gKdlhl~Gysilg~~~~~ 714 (715) T protein:vir:26 643 KSG--------STPREIYKLKDVPVVNPNDLSSINYPTDTVVTKSKVRGRGRSMKFRFESVAGKDFHLVGYEVIGAKNNS 714 (715) T ss_pred cCC--------CChhhhheecceeeeCCCccccccCCcceeEeeeeeeccceEEEEEEEecCCcceEEEeEEEEecccCC Confidence 221 112244555444444444333211 11111123467888999999999999999999999999999988 Q ss_pred c Q lcl|Aclame:pro 798 S 798 (801) Q Consensus 798 ~ 798 (801) + T Consensus 715 ~ 715 (715) T protein:vir:26 715 Y 715 (715) T ss_pred C Confidence 8 No 29 >protein:vir:8837 Length: 513 # NCBI annotation: constituent protein # Family: family:all:4957 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775245;genbank:gi:27476043;genbank:GeneID:2700591 Probab=98.48 E-value=5e-07 Score=55.15 Aligned_cols=483 Identities=13% Similarity=0.076 Sum_probs=233.4 Q ss_pred CcceeeechhhhcccccCcchHhhhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCCcEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVV 80 (801) Q Consensus 1 Ma~v~~~~~~~~~Gvsqq~d~~r~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~~~y~l~ 80 (801) ||...+..-.-.|.|--+.+.+-=.+.-..+.|+++. .|++.||||-.-|++.-+... .-.+++. .....+++. T Consensus 1 ~~~~~~~~~~~~g~~~d~~p~~lp~~a~s~~~N~~~~-~~~~~~~~g~~pv~a~~~~~~----~g~~~~~-~~g~~~~~~ 74 (513) T protein:vir:88 1 MALERQEVKNPTGIVTDIAPADLPLDKWSFGNNVRFK-NGKAQKALGHSPIFDTAQAPI----LDMFPFI-RNNIPYWLL 74 (513) T ss_pred CCcCChhhcccccceeccChhhcCCCcceeeeeeeEe-cceeeecCccceeeecCCCCc----eeeeeee-cCCCeEEEE Confidence 8887777766666676555554434445777888775 688899999988854322211 2234553 456677777 Q ss_pred EeCCeEEEEeCCCeEEEEecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEEecCCCcc Q lcl|Aclame:pro 81 FTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYG 160 (801) Q Consensus 81 ~~~~~~rv~~~~g~~~~v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~y~ 160 (801) .+...++.++..+ ..-++. .+| ++......++++.+|+++++|...+|+...-++ T Consensus 75 ~~~~~~~~~~~~t-~~dvs~-~~~--~~~~~~~w~~~~f~~~i~a~ng~~~~q~~~~~s--------------------- 129 (513) T protein:vir:88 75 CSEKRLYLADGTT-IIDVSP-GPY--SASVTNRWSVGSFNGVIFANDGVNPPHHLPPTE--------------------- 129 (513) T ss_pred eeceEEEEecCce-eeeccc-cce--eecccCceeeeeecCEEEEEcCCCcceEEcCCC--------------------- Confidence 7777777766332 223333 223 222234467777777777766544443211000 Q ss_pred ceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCceeEEE Q lcl|Aclame:pro 161 RRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGL 240 (801) Q Consensus 161 ~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t~ 240 (801) T Consensus 130 -------------------------------------------------------------------------------- 129 (513) T protein:vir:88 130 -------------------------------------------------------------------------------- 129 (513) T ss_pred -------------------------------------------------------------------------------- Confidence Q ss_pred EeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEEE Q lcl|Aclame:pro 241 QTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALV 320 (801) Q Consensus 241 t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv 320 (801) ..+.+||.. + T Consensus 130 ------------------~~f~dl~g~-p--------------------------------------------------- 139 (513) T protein:vir:88 130 ------------------SVFRVLPNF-P--------------------------------------------------- 139 (513) T ss_pred ------------------ceeeeccCC-C--------------------------------------------------- Confidence 000011000 0 Q ss_pred EecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEec--------CCEEEEEecCCcccc---ccccC Q lcl|Aclame:pro 321 RASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS--------GENIILSRTSKYFNF---FPASV 389 (801) Q Consensus 321 ~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~--------~~~v~~S~~gd~~nF---~~~t~ 389 (801) +.| .-+.|.+|++||++++ |+.|+.|..+|...+ |-.+. T Consensus 140 -----------~~~-------------------~a~~i~v~~~flv~~~~t~~~~~~PnrV~wS~~~D~~~~P~~W~~t~ 189 (513) T protein:vir:88 140 -----------ANT-------------------TFRRLKSFKNFLIGLNVTSNSIEMPQMVWWSTSADAGGVPASWDPTD 189 (513) T ss_pred -----------ccc-------------------ceEEEEEEeeEEEEeecccCcCCCCceEEEecccCCccccccccccc Confidence 001 1133667888888864 788999999996443 22221 Q ss_pred CCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEe-CCccccccceEEEEEe-eeccccCCCcEEeCCeEEE Q lcl|Aclame:pro 390 SNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLT-ASGILSSRSVELNLTT-QFDVQDRARPHGVGRNVYF 467 (801) Q Consensus 390 ~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~-~~~~lTP~~~~i~~~s-~~~~~~~~~Pv~vg~~v~f 467 (801) .+ .+++=.++ ++....|...++....|+||++.+-|.++ .++ |....++... .-+|.+.-.=+.+|+.+|| T Consensus 190 ~t-~~a~~~~l---~d~~g~~v~g~~~g~~liif~e~~i~~m~y~g~---~~if~~~~i~~~~G~~~p~SI~~~~~~~ff 262 (513) T protein:vir:88 190 PT-KDAGQNTL---ADTNGAIVDGVKLRDSFIIYKEDSVYSMRYIGG---LYIFQFQQLFNDVGILGPNCAIEFDGNHFV 262 (513) T ss_pred cc-Cccccccc---CCCccceeeeeecccceEEEecccEEEEEecCC---CceEEEEeecccccccCCceeEEECCeEEE Confidence 11 22222222 33334455567777899999999999996 332 2234444433 3345444455889999999 Q ss_pred EEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCC-----CcEEEEEeC-CCCeEEEEE-Ec-----CC--CeEEEE Q lcl|Aclame:pro 468 ASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPN-----GVFSISGTT-AENFAAILT-SG-----AP--NRVYIY 533 (801) Q Consensus 468 v~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~-----~~~~~~~~~-~~~~~~~~~-~~-----~~--g~l~~~ 533 (801) +++.| ++. + +..+-...+. ..+++.|-. ....+...- ..+..++|+ .. .. ..+++| T Consensus 263 ls~~G----f~~-~--~G~~~~~Ig~---ekVdk~f~~~~n~~~~~~~~~~~d~~~~~v~~~y~s~~~~~~~~~~~~lVY 332 (513) T protein:vir:88 263 VGHGD----VYV-H--NGVQKQSVID---AQVRKFFFSDINPDNYQRTFVLADHVNTEMWVCYSSTRSEPGKHCDRAIIW 332 (513) T ss_pred EeCCc----eEE-e--cCceeeeccc---chhhhhhhccCCcccceEEEEEEcCcccEEEEEecCCCCCCCcccceEEEE Confidence 99987 332 2 1111112221 133333322 222222222 233334444 11 01 346666 Q ss_pred EEEecCCceeEEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeecccc Q lcl|Aclame:pro 534 KFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMGNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGT 613 (801) Q Consensus 534 ty~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t 613 (801) -|+ ++ .|+..+++..+- .+.+.-+.+... .++.... -.|... T Consensus 333 d~~----~~---~Ws~~~~p~~~~--g~~g~~~~~~~~--------------~~~~~~~-------~~d~~~-------- 374 (513) T protein:vir:88 333 NWK----EN---TWSIRDLPNVLS--GAYGIIDPKTSN--------------LWDDDSN-------PWDTDT-------- 374 (513) T ss_pred Ecc----CC---eEEEEeccchhh--cccccccccccc--------------eeccccc-------ccccch-------- Confidence 663 22 476555443210 000000000000 0000000 001000 Q ss_pred ccccccceeeccccccCcccc--cceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeE Q lcl|Aclame:pro 614 YNDDTYQTSISLATIYGMNFT--KGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLI 691 (801) Q Consensus 614 ~~~~~~~~~~~~~~~~gl~~l--~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~ 691 (801) .+...+.... .-..+.-.++|.++... .+ .-.-|-++++.++.+.+.+ T Consensus 375 -----------~~~~~~~~~~~~~sl~~~~~~~~~~~~fd--~~-----------------~~f~G~~lea~~~t~~~~~ 424 (513) T protein:vir:88 375 -----------SVWGEGSYNPAKSSMIFTSFQDAKLFLFG--ET-----------------STFSGQSFTSTLERSDIYL 424 (513) T ss_pred -----------hhhhccccccccceeEeeeccCCceeeec--cc-----------------ccccCCceEEEEEecCccc Confidence 0000000000 00111222333322110 00 1134778888888766544 Q ss_pred EecCCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCccc-ccccccccccccccccccccccccEEEEEEeecCce Q lcl|Aclame:pro 692 KKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREF-IYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQT 770 (801) Q Consensus 692 ~~~~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~ 770 (801) . ++... .+|+++...+...|.+.+.+....... ...... .. ..++ .++..++++...+- T Consensus 425 ~----~~~~~------~~i~~v~~~~t~~g~~t~~vg~~~~~~~~~~~s~-----~~----~~~~-~~~~~~~~r~~gRy 484 (513) T protein:vir:88 425 G----DDRMM------KTVSAVIPHITGNGVCNIWVGNAQVQGSGIRWKG-----PY----PYRI-GQDYKIDTKHVGRY 484 (513) T ss_pred c----Cchhh------eeeeeeeeeeecceEEEEEEeeeccCcccccccc-----ce----eeec-ccCceEEeccCCce Confidence 2 22211 245555556666777766653321111 111110 00 0111 22344666677788 Q ss_pred EEEEEEECCcCCEEEEEEEEEEEEeccccC Q lcl|Aclame:pro 771 NLVTIESDASTPLNIIGCGWEGNYLRRSSG 800 (801) Q Consensus 771 ~~v~i~~~~P~P~tvlsi~~eg~y~~r~rr 800 (801) .+++|+...--|+++.++++|..=-. .+| T Consensus 485 ~~~ri~i~~~~~w~~~G~~ve~~~~~-g~R 513 (513) T protein:vir:88 485 IALKFDFASAGDWYFNGYTLEMAPKA-GMR 513 (513) T ss_pred EEEEEEccCCCceEEeeEEEEEecCC-CCC Confidence 88888888889999999999876421 444 No 30 >protein:vir:3133 Length: 911 # NCBI annotation: hypothetical protein # Family: family:all:5234 # MgeID: mge:64 # MgeName: VpV262 # Cross-refs: genbank:acc:NP_640315;genbank:gi:21234408;genbank:GeneID:956056 Probab=98.05 E-value=5.8e-06 Score=49.30 Aligned_cols=661 Identities=14% Similarity=0.126 Sum_probs=254.7 Q ss_pred Ccceeeechhhh--cccccCcchHhhhch-hhhhhcceeeecCCceeCCcc-------eEeeeecCCCccccccEEEEEE Q lcl|Aclame:pro 1 MALISQSIKNLK--GGISQQPDILRFAEQ-GSVQINGWSSESEGLQKRPPM-------IHLKTLGPAGYVGAQPYVHLIN 70 (801) Q Consensus 1 Ma~v~~~~~~~~--~Gvsqq~d~~r~~~q-~~~~~N~~~~p~gGl~rRpGt-------~~va~~~~~~~~~~~~~~~~~~ 70 (801) ||.-.+....|+ +|--..-.+..|-.- +-..+||=....|=-.||-|. +|+....... +.+..+--.+ T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 78 (911) T protein:vir:31 1 MAARKGAVNRFTPVRGWVTEGNLANYGQDVALDVENMDIEKTGLTQRRFGLFAETSSEQFLSTFTATA--RARGLLAVKE 78 (911) T ss_pred CccccccccccccceeeeecCchhhcCceeEeeeccccchhcccchhheeeeeccchhhhhhhhhhhh--hhcceeehhh Confidence 887666665553 331111223333222 446789988888777788775 2222111111 1111110000 Q ss_pred ----cCCCcEEEEEEeCCe-EEEEeCCCe------EEEEecCCcccccCCCc-----cceeEEEEcCEEEEecCceeeeE Q lcl|Aclame:pro 71 ----RDEFEQYFVVFTGED-IKVFDLDGK------EYQVRGDRSYVRTANPR-----EDLRMITVADYTFVTNRKVVVQS 134 (801) Q Consensus 71 ----~~~~~~y~l~~~~~~-~rv~~~~g~------~~~v~~~~~y~~t~~~~-----~~l~~~q~~d~~~l~~~~~~~~~ 134 (801) -+..+--||+|+.|+ +.|...... ++++.. +.+.-.+ +-.+..---..-.|.||...|-- T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (911) T protein:vir:31 79 WREAWGDKDVNMLIFHAGYKVHVVQDTAPLRDANILLTIDL----LEAGIKLDGVIDSPVHISVGVGFAIITNPRIEPVL 154 (911) T ss_pred HHHhhCCCcceEEEEecCcEEEEEecccCccccceEEEeee----eccCceeeeeecCceeEEeeceEEEeecCccceEE Confidence 122334677887765 333332221 122111 1110000 11222223356667888877743 Q ss_pred e--ecccccCCCCC--Cc-cEEEEec--------CCCccceEE------EEeCCceeEeeeeecccccccceeechHH-H Q lcl|Aclame:pro 135 N--DQSVNLPGFKD--QG-DALINVR--------GGQYGRRLS------IEFNGAERAAVQLPDGSQPAHVNEVDGQA-I 194 (801) Q Consensus 135 ~--~~~~~~~~~~~--~~-~~~~~v~--------~g~y~~~y~------vti~~~~ta~~~tp~~s~~~~~~~~~~~~-i 194 (801) + .......-+.. .| ..++..+ +-+|+.+.+ +.-.|..+.+-.|.+.+..+.+- .+..+ - T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 233 (911) T protein:vir:31 155 IKLDDVDDEGVPTLSYEPLTLLIRTRELLTPYTTGTNYGDTLTPEEEWNLYNSGWATITRATKDKSGSGTVY-VNPVQYY 233 (911) T ss_pred EEeeccCccCcccccccceeeEeeehhhccccccccccCcccCchhhcccccccceeeeeecccCCccceEE-Echhhee Confidence 2 22221111110 01 1111111 112221111 00011112222222221111110 00000 0 Q ss_pred H---------HHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCceeEEEEeecCCCccceeeeeeecccceecc Q lcl|Aclame:pro 195 A---------EKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLP 265 (801) Q Consensus 195 a---------~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp 265 (801) - ..|.++.. ..+.-.| ..+.+ +..+.++.-.+.... T Consensus 234 ~~~~~~~~~~~~~~~~~~-------------------~~~~~~~--------~~~~~--------~~~~~~~~~~~~~~~ 278 (911) T protein:vir:31 234 FDKRGVYPSHSVLYNSMK-------------------QESAKEI--------VALNV--------FSPWADEKINFGTTT 278 (911) T ss_pred ecccCcCcchhhhhhhhh-------------------hhcccee--------EEEee--------eccccccccccccCC Confidence 0 00000000 0000000 00000 000000000000000 Q ss_pred ceeeCCeEEEeeccCCCccceeEEEEcc-------------CceeEEEeeccc-----eeeEEecCcceEEEEEecCCeE Q lcl|Aclame:pro 266 INAPDGYIVKIVGDTSKTADQYYVRFDL-------------NRKVWVETIGWN-----TRTHLYYHTMPWALVRASDGNF 327 (801) Q Consensus 266 ~~~~~g~~v~i~~~~~~~~~~yyv~~~~-------------~~~~W~e~~~~~-----~~~~~~~~t~p~~lv~~~~~t~ 327 (801) + |-|. --.+.||...-. ..|+ .|-.+|. .++++++=.....+--.+.|+. T Consensus 279 ~--~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~e~~np~gl~~igt~~n~k~~a~~~~ 346 (911) T protein:vir:31 279 P--PLGR---------YIHSAYYFDSAAILSLGIGNLTPPTSDGT-TEGSGPAEEEISNPIGLDNIGTVNNLKLIAEGTV 346 (911) T ss_pred C--chhh---------hhhhheeeccceeeeecccccCCCCCCCc-cCCCCCchhhhcCCCCcccccchhceeeeeccce Confidence 0 0000 000112211000 0000 0000111 1122222111111222333443 Q ss_pred EeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEec-----CCEEEEEecCC--------ccccccccCC--CC Q lcl|Aclame:pro 328 DFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS-----GENIILSRTSK--------YFNFFPASVS--NY 392 (801) Q Consensus 328 ~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~-----~~~v~~S~~gd--------~~nF~~~t~~--~~ 392 (801) . |. +...|+|++||.+|++|+. ...|.+|+.-+ |++=++++.. .. T Consensus 347 ~-----~~---------------~~~r~r~~~~yaGRVfyaD~dkngk~rIlFSqLv~sl~di~nCYQdaDPTSeee~DL 406 (911) T protein:vir:31 347 R-----WT---------------VKDRPRCSGYHNGHVYFGDRDKNGKTRILVSQLVNSLDNIPKCFQDADPTAEEINDL 406 (911) T ss_pred e-----ee---------------ecccccceeeeccEEEEeeeccCcceeEEEEeeccccccccccccCCCccccccchh Confidence 3 33 2347899999999999995 34899998754 4444444321 23 Q ss_pred CCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCC--ccccccceEEEEEeeeccccCCCcEEeCCeEEEEEc Q lcl|Aclame:pro 393 SDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTAS--GILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASP 470 (801) Q Consensus 393 ~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~--~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~ 470 (801) .|.|...+.+.. ...|+-|+.+++.|+||..++.|.|.|. ...|.++..|..++..+|++.=.-|++|+.++|-++ T Consensus 407 IdTDGg~vri~g--ah~Ii~LV~~G~sLlVFcaNGVWAI~G~d~~g~TATdy~ItKIsdvGcsspNSVVvVgn~i~fWSd 484 (911) T protein:vir:31 407 IATDGFTMYPVG--MGAPITMVEFNKRLLLLCTNGVWAIRGTSGGGATATDFTLDKVASVEFNSPQSVVDIGTAIVFWSE 484 (911) T ss_pred hhcCCcEEecCC--CCCceEEEEecCeEEEEEeCcEEEEeccCCCceeeeeeEEEEEeeeeeCCCCeEEEecCceEEeeC Confidence 346777676644 3458889999999999999999999764 379999999999999999998888999999999999 Q ss_pred CCCeEEEEEEeeecccccceehhhHH-HHHHHhcCC----CcEEEE--EeCCCCeEEEEEE--cCCCeEEEEEEEecCCc Q lcl|Aclame:pro 471 RASFTSINRYYAVQDVSSVKNAEDMT-AHVPNYIPN----GVFSIS--GTTAENFAAILTS--GAPNRVYIYKFLYIDEE 541 (801) Q Consensus 471 ~g~~~~v~~~~~~~~~~~~~~~~dls-~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~--~~~g~l~~~ty~~~~~e 541 (801) .| |..+...+. .-+.++.+| ..|..|... .+...+ +-..++.+.|... +|.++.|.+. .| T Consensus 485 ~G----IyaLganqf--nD~tAnNLTesTIQ~y~d~I~~dkIkNVtgtyd~de~rVyW~yPn~lDe~teykt~-----~~ 553 (911) T protein:vir:31 485 RG----IIAIGVNDF--GDLTSNNLTENTIDEYYDSLDRDIIKNVKGTFINDENRVYWVVPNKQDSNGEYKTD-----GE 553 (911) T ss_pred Cc----EEEEeeccc--CccccccccHHHHHHHHhhcChhhhceEEEEEEccCCEEEEEecCccCCccceeec-----Cc Confidence 87 666666554 357888888 556666543 122222 2233344444444 3444555422 11 Q ss_pred e------eEEeEEeeecCCCeEEEEE---------E-----EcCCEEEEEEEeC-CCEEEEEEEEeecCCCC-------- Q lcl|Aclame:pro 542 I------RQQSWSHWDFGDNVTVFAA---------Q-----VINSTMTVLMGNE-HAVWMGRLHFTKNSIDI-------- 592 (801) Q Consensus 542 ~------~v~aW~~w~~~g~~~~~~~---------~-----~~~d~l~~vv~r~-~~~~~~r~~~~~~~~~~-------- 592 (801) + ...+|.+|+..+.-..... + ..++. ++|++.. ......+.++....... T Consensus 554 ~ILVfdLatgaFYPwtvs~gpLl~~p~y~Lv~TreEvtvPi~~etg-aiIve~gsdPV~~tl~vdttGvDg~ayLl~frd 632 (911) T protein:vir:31 554 LVLVLNLDTGGFYKHTVSGGPLLHAPFRRLVNTRAEVSIPITETDG-TVITDTLGDPVTVTRTVTTTGVDGLAYFASFDD 632 (911) T ss_pred eEEEEEeccCcccceeeecceeecccccccccccccceeeEEeecc-eEEEecCCCCeEEEEeeecccccceeEEEeecc Confidence 1 1238999987543222110 0 00111 1222222 22233333322211000 Q ss_pred ---------CcCcceeeeeeeeEEeeccccccccccceeecccc--ccCcccccceEEEEecCCccccceeeccccccCc Q lcl|Aclame:pro 593 ---------PGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLAT--IYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDP 661 (801) Q Consensus 593 ---------~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~--~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~ 661 (801) .+....-|+|.+.- ++.+...+.. ..+.+..+ ++.+....| T Consensus 633 g~~g~~~f~a~~~~~~~~dw~~~-----------~~~~~~~y~s~~~~~y~~~~-----------------~~~~~~~~p 684 (911) T protein:vir:31 633 GVNGQFNFIAEHQPWGFADWANV-----------PNMTRVNYSSYVDFAYEYPE-----------------VMIGNISLP 684 (911) T ss_pred CCcceEEEEEeecCCeeeccccC-----------ccccccchhHHHHhhhhhhh-----------------hhhhcccCc Confidence 00111123332210 0001000000 00111100 011111111 Q ss_pred EEE--------EcCc-ccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEe--------------e Q lcl|Aclame:pro 662 VLR--------LDGN-QEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNY--------------E 718 (801) Q Consensus 662 ~~~--------i~~~-~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~--------------~ 718 (801) .++ +..+ +.++ ..||.|- +++- -+...-|.+..|++.+.+ . T Consensus 685 yi~sy~~~~~rv~~~~y~~~--~a~~~f~-~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (911) T protein:vir:31 685 YIHSYYLTGIRVQTEQYTTE--TAHLSFH-RVQA-------------HQTTALGTVTFHKVDMMVSTGMQVISFHKDDLL 748 (911) T ss_pred eeeeeeeeeeEEeccceeee--cccceeE-eeec-------------ccceeeeeeeeeeeeehhhccceeeeeccccce Confidence 110 0000 0000 0111110 0110 001111222333332211 1 Q ss_pred ccccEEEEeCCCCccccccccccccccccc-ccccccccccEEEEEEeecCceEEEEEEECC-----------cCCEEEE Q lcl|Aclame:pro 719 DSGAFTIRVNNLSREFIYTMAGARLGSDNL-RVGRSNIGTGQYRFPVVGNAQTNLVTIESDA-----------STPLNII 786 (801) Q Consensus 719 ~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~-----------P~P~tvl 786 (801) .+-.+.+ |++ ..+..+.+|..+..... ...+-|...|+.-+- .+ .+++-.+.|+- .+|.++. T Consensus 749 ~~~~~~v-VNG--DAE~GtmTGWtvtaG~~d~~Ta~p~~rGSyfFa-~~--nn~n~aL~QDIDSagaaaIDAG~v~ynvS 822 (911) T protein:vir:31 749 RTEAVTL-VNP--DAETGDATGWTVTAGTLDVRTAAPLYQGSYYFW-SD--SNANFAAYQDIDPVGGGYITAGELANNVI 822 (911) T ss_pred eeeeeEE-EcC--CCCCCCCCcceeeccchhhccCCchhcceEeEc-CC--CCcchhhheeccccccceeeeccchhhhh Confidence 2222221 121 12233344444322221 111224555665442 11 12333333332 2333332 Q ss_pred EEEEEEEEeccc--cC--C Q lcl|Aclame:pro 787 GCGWEGNYLRRS--SG--I 801 (801) Q Consensus 787 si~~eg~y~~r~--rr--~ 801 (801) .|-+-|-.+- -| | T Consensus 823 --awl~gyAaqnd~Dr~~l 839 (911) T protein:vir:31 823 --EAKLSWAARGNTDLGTV 839 (911) T ss_pred --hhhhhhccCCCCccceE Confidence 3666666652 33 3 No 31 >protein:vir:95475 Length: 771 # NCBI annotation: hypothetical protein ORF038 # Family: family:all:5234 # MgeID: mge:1570 # MgeName: PA11 # Cross-refs: genbank:acc:YP_001294631;genbank:gi:149408197;genbank:GeneID:5237042 Probab=97.58 E-value=4.1e-05 Score=44.61 Aligned_cols=655 Identities=12% Similarity=0.083 Sum_probs=271.6 Q ss_pred Ccce--eeechhhhcccccCcchHhhh-chhhhhhcceeeecCCceeCCcceEe-------eeecCCCccccccEEEEEE Q lcl|Aclame:pro 1 MALI--SQSIKNLKGGISQQPDILRFA-EQGSVQINGWSSESEGLQKRPPMIHL-------KTLGPAGYVGAQPYVHLIN 70 (801) Q Consensus 1 Ma~v--~~~~~~~~~Gvsqq~d~~r~~-~q~~~~~N~~~~p~gGl~rRpGt~~v-------a~~~~~~~~~~~~~~~~~~ 70 (801) ||+- +-....|++|+=--.-++-|| +..-.-+||.....|--+||-|.-|- ....-.+ .....+...+ T Consensus 1 m~~~~~~~~vNtFv~GliTEas~ltfpqnasiDe~N~~l~rdG~r~RR~g~~~E~~~~~vls~~~vpa--~g~~~v~~~~ 78 (771) T protein:vir:95 1 MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPA--DGTIAVTSHN 78 (771) T ss_pred CCcccchhHHhhhhhheeeccccccCCccceeeeeeeeecCCCcchhhceeeeecCCceEEEEEEecc--cceEEeeeec Confidence 9973 345667999953333334444 34556789999999988899887553 2221110 0001111111 Q ss_pred ----cCCCcEEEEEEeC-CeEEEEeCCCeEEEEecCCcccccCC---CccceeEEEEcCEEEEecCceeeeEeecccccC Q lcl|Aclame:pro 71 ----RDEFEQYFVVFTG-EDIKVFDLDGKEYQVRGDRSYVRTAN---PREDLRMITVADYTFVTNRKVVVQSNDQSVNLP 142 (801) Q Consensus 71 ----~~~~~~y~l~~~~-~~~rv~~~~g~~~~v~~~~~y~~t~~---~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~ 142 (801) -+.-...|+++.. ..+.+|...+..+. -..-+.++.. |...|++..+..++.|+||..-+..+.--+.+. T Consensus 79 W~na~G~v~~~~livqvg~~l~f~q~t~~pLs--~~n~~~~a~~nlSPsh~isv~v~~G~livanp~i~~~~~~~d~~t~ 156 (771) T protein:vir:95 79 WENAGGEVGRWISLVQVGTELKFFQTTGETLS--EGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSV 156 (771) T ss_pred hhhcccccCcEEEEEEeccEEEEEecCCCccc--ccceeeeecceeccceeEEEEEeeeEEEEecCCccEEEEEecCCcc Confidence 1233356677764 45777776663221 1111222222 344588888899999999998776554322111 Q ss_pred CCCCCccEEEEecCCCccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEE Q lcl|Aclame:pro 143 GFKDQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNV 222 (801) Q Consensus 143 ~~~~~~~~~~~v~~g~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~ 222 (801) .+.+ ...++..+.+ .+. -.+|+..... +-..+..... ..++.-+..+ .+|.... T Consensus 157 s~t~-~~ll~r~rf~---~q~--~~~G~d~~~~----~~~~~~gt~~---------tn~~iynlyN-------~gw~~pk 210 (771) T protein:vir:95 157 SVTT-KRLLVRDLFG---VQD--IVNGVDLRQG----NDIATRPTVQ---------TNAHIYNLRN-------QTFGVPR 210 (771) T ss_pred eeEe-eeeeeeehhh---ccc--cccccceecc----cccccCCccc---------Cchhheeccc-------cceeccc Confidence 1110 0011111100 000 0001000000 0000000000 0001000000 1111000 Q ss_pred CCceEEEEeCCCceeEEEEeecCCCccce-eeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEe Q lcl|Aclame:pro 223 GPGFIHILAPNNDNVWGLQTKDGYADQLI-NPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVET 301 (801) Q Consensus 223 ~~~~~~i~~~~~~~~~t~t~~dg~~~t~~-~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~ 301 (801) ....++|.- ..++..-. +....|.+. +.|.+- .+...|.|- T Consensus 211 --------------------~~~~snt~~~~iV~~y~a----~~g~~pS~s------------d~~N~a--~~k~~~~Ei 252 (771) T protein:vir:95 211 --------------------VTWHSNEPSDPIVTFRSA----ASGKFPSNS------------DSVNLA--LSKRADVEP 252 (771) T ss_pred --------------------cccccCCccccceEeeec----cCCCCcCCc------------eeeccc--cchhhccce Confidence 001111110 00111111 011111000 000000 000112221 Q ss_pred ec-----cceeeEEecCcceEEEEEecCCeEEeeccCcCccccC--CcccccCcccc-----------CCCceEEEEEcC Q lcl|Aclame:pro 302 IG-----WNTRTHLYYHTMPWALVRASDGNFDFKVLEWGARTVG--DDTTNPYPSFT-----------GQTINDIFFFRN 363 (801) Q Consensus 302 ~~-----~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~~~~g--d~~s~p~psf~-----------g~~p~~v~f~q~ 363 (801) .. +........+|. -.+.|-|....-.-.....- .+.+.|+||-. -+.-+.|+=|-. T Consensus 253 ~t~~~f~~~~~~~~~~Gt~-----~~~~G~yi~da~~~g~~~Lt~~ve~~gr~~s~~~~~~~l~~~~t~~~~~~vaeyag 327 (771) T protein:vir:95 253 STTDRFRAEDIVLNPIGTY-----ETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGASVVCEYAG 327 (771) T ss_pred eeecccchhhhhhcccCcc-----cccCcceeeehhhhcccccceeeeccccchhhhccccccccccCCCCceeEEeeee Confidence 11 000000000000 00001111110000000000 01122333211 134567899999 Q ss_pred eeEEec------------C---CEEEEEecCC--------ccccccccC--CCCCCCccEEEEEcCCcceEEEEEeecCC Q lcl|Aclame:pro 364 RLGFLS------------G---ENIILSRTSK--------YFNFFPASV--SNYSDDDPIDVAVSHNRVSTLKYAVPFSE 418 (801) Q Consensus 364 RL~~~~------------~---~~v~~S~~gd--------~~nF~~~t~--~~~~d~d~i~~~~~~~~~~~i~~~~~~~~ 418 (801) |.|+++ | .+|.+||.=| |.+=++++. ..+.|.|...+.+-+.- .|.-|+.++. T Consensus 328 RvwYag~~~~~iD~dkng~~~~~~ilfSqLv~s~~di~nCyQd~DPTsee~~dLidTDGg~iri~gah--~ii~Lv~f~~ 405 (771) T protein:vir:95 328 RVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAH--DIINLVNVGS 405 (771) T ss_pred eEEEecceeEEeeccccCCceeeeEeeehhhcchhhcccccccCCCchhhhhhhhhcCCCEEEecCCC--CceeEEEecc Confidence 998886 1 1499998643 333333322 23567888888876544 3666899999 Q ss_pred cEEEEecCcEEEEeC-C-ccccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEEEeeecccccceehhhHH Q lcl|Aclame:pro 419 ELLLWSDQAQFVLTA-S-GILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMT 496 (801) Q Consensus 419 ~L~~~t~~~q~~~~~-~-~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls 496 (801) .|+||...+.|+|.+ + ...|.++..+..+++.+|++.=.-|++|+.++|-.++| |+.+...++ .-+.++.|| T Consensus 406 sLlvfc~NGVWAi~ggsd~g~tAtdY~ltKIs~vg~sspnSvVvvg~~i~ywsdtg----Iyal~~Ndf--n~~tAqnLT 479 (771) T protein:vir:95 406 AVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDG----IYHLTRNQY--GDYVANNLT 479 (771) T ss_pred eEEEEEecceEEEEeccCCceeeeeeEEEEeeeeccCCCccEEEecceEEEeeCCc----eEEEeeccc--Ccchhhccc Confidence 999999999999954 3 47999999999999999999888899999999999987 777766654 568999999 Q ss_pred -HHHHHhcCCCc---EEE---EEeCCCCeEEEEEEc--CCCe--E--EEEEEEecCCceeEEeEEee---ec-CCCeE-- Q lcl|Aclame:pro 497 -AHVPNYIPNGV---FSI---SGTTAENFAAILTSG--APNR--V--YIYKFLYIDEEIRQQSWSHW---DF-GDNVT-- 557 (801) Q Consensus 497 -~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~--~~g~--l--~~~ty~~~~~e~~v~aW~~w---~~-~g~~~-- 557 (801) ..|.+|...=. +.- .+-.-++.+.|+..+ |.+. + ++|. -...|+.+| +. .|..- T Consensus 480 ekTIq~~~~~I~~dk~knVtg~fd~~e~rvyw~yPn~~D~~~e~~t~LV~d-------LalgaFYp~~i~~~~ag~l~~~ 552 (771) T protein:vir:95 480 EKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVFD-------LALGAFYPSKIGSLTAGRLPIP 552 (771) T ss_pred hHHHHHHHhhcchhhhcceEEEEEccCCEEEEEecceecCCCcceeeeeee-------ecccccccccccccccCcccee Confidence 78888764421 111 222334444433321 1111 1 1221 112367777 42 23221 Q ss_pred --EEEEEE-----cCCEE---------------EEEEEeC-CCEEEEEE-EEeecC---CCCCcCcceeeeeeeeEEeec Q lcl|Aclame:pro 558 --VFAAQV-----INSTM---------------TVLMGNE-HAVWMGRL-HFTKNS---IDIPGEPYRLYIDAKRKYTIP 610 (801) Q Consensus 558 --~~~~~~-----~~d~l---------------~~vv~r~-~~~~~~r~-~~~~~~---~~~~~~~~~~~lD~~~~~~~~ 610 (801) ++...+ .+.++ ....-|. ...-++.. .++... ..+.+....-|+|.+. T Consensus 553 vg~~~~p~~~lv~T~~eV~v~~~~v~~tG~~vtV~~~~r~~~~~~~~y~~~~~dg~~g~~~Fa~~~~~~f~DW~s----- 627 (771) T protein:vir:95 553 VGSVKIPPYKLVETGEEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKS----- 627 (771) T ss_pred eeeeecCccccccccceEEecceeeEecCCceEEEEEEeeccccceEEEEEEecCCCeeEEeccccCcceeeccc----- Confidence 011000 01111 1111111 00000000 010000 0011122222334321 Q ss_pred cccccccccceeeccccccCcccccceEEEEecC-CccccceeeccccccCcEEEEcCcccCceEEEEEeeeE-EEEe-C Q lcl|Aclame:pro 611 AGTYNDDTYQTSISLATIYGMNFTKGRVSVVFPD-GKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPF-TYTF-S 687 (801) Q Consensus 611 ~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~~~~d-G~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~-~~~~-~ 687 (801) +.|+.. ....+.+ |- ..+|+... .+-+||-. ++.- - T Consensus 628 -----------------v~~~~v----dy~sy~~~gY-----------------~~~gd~~~---~k~~PYit~y~~~te 666 (771) T protein:vir:95 628 -----------------VDGIGV----DAPAYLLTGY-----------------LAGGDYQR---EKFVPYITFHFKKTE 666 (771) T ss_pred -----------------CCCccc----chHHHHHhhh-----------------hccchhee---eeccceEEEEEEeec Confidence 000000 0000000 00 00000000 00111110 1110 0 Q ss_pred CeeEEecCCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCc-ccccccccccccccccccccccccccEE--EEEE Q lcl|Aclame:pro 688 KFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSR-EFIYTMAGARLGSDNLRVGRSNIGTGQY--RFPV 764 (801) Q Consensus 688 ~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~tg~~--~vp~ 764 (801) .=++....|+-. .....+-|+ ...++...++. -.+.++ ...|.+......+. .+++--.....+ ...+ T Consensus 667 dg~v~~~~g~~~-p~n~sSclm--~~sw~ws~s~~----t~k~~~~~eaYk~~~~~~p~~--~~~~~yp~~~VV~TKsri 737 (771) T protein:vir:95 667 DGFVEDAEGDWT-PTNQSSCMV--QSQWSWTNSPA----SNKWGRTWQAYRFRRHFFPDN--IDNQFDDGNSVVETKSRL 737 (771) T ss_pred ccceeccccccc-ccCCcceEE--EEEeeeecCCC----CCccccchheeeecceeccCC--cchhcCCccceeeeehee Confidence 111111111100 011111111 12222222221 011121 23444433333221 111111122222 2357 Q ss_pred eecCceEEEEEEECCcCCEEEEEEEEEEEEeccc Q lcl|Aclame:pro 765 VGNAQTNLVTIESDASTPLNIIGCGWEGNYLRRS 798 (801) Q Consensus 765 ~~~~~~~~v~i~~~~P~P~tvlsi~~eg~y~~r~ 798 (801) +|..+-.+++|++..--.++|++.++--..|-.. T Consensus 738 RG~Gr~~~~rf~s~~gKdlhl~Gysil~~~~~~~ 771 (771) T protein:vir:95 738 RGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV 771 (771) T ss_pred eecceEEEEEEEecCCcceEEEeEEEEEeecCcC Confidence 7889999999999999999999999888877766 No 32 >protein:vir:177 Length: 472 # NCBI annotation: DNA stabilization protein # Family: family:all:1540 # MgeID: mge:5 # MgeName: HK620 # Cross-refs: genbank:acc:NP_112082;genbank:gi:13559872;genbank:GeneID:920982 Probab=94.76 E-value=0.0036 Score=34.00 Aligned_cols=443 Identities=9% Similarity=0.021 Sum_probs=164.9 Q ss_pred HHhhhhhcccceeeeeeccceEEEECCceEEEEe-CCCceeEEEEeecCCCccceeeeeeecccceecccee-------e Q lcl|Aclame:pro 198 LAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILA-PNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINA-------P 269 (801) Q Consensus 198 l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~-------~ 269 (801) |..-......... ....++-.....+-..|-.. ..+.+...+.+..|- ....+++..+ + T Consensus 1 m~~~~~Pl~~G~~-~~~~~~d~~~~~pVN~~a~~~~~~~s~~~l~~tPGl------------~~~a~v~G~~RG~~~~~~ 67 (472) T protein:vir:17 1 MPIQQLPLMKGVG-KDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGI------------AKRSDVNGVSRGVEYNMA 67 (472) T ss_pred CCeeeeeeccCce-eeccccchhheeeeeeeeeccCCCcccceeecCCCc------------eeeccCCccccceEEEee Confidence 1110000000000 00000000011111111111 111112222222211 1112222222 2 Q ss_pred CCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEEEEecCCeEEeec-----cCcCccccCCccc Q lcl|Aclame:pro 270 DGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALVRASDGNFDFKV-----LEWGARTVGDDTT 344 (801) Q Consensus 270 ~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~-----~~w~~~~~gd~~s 344 (801) +|....|.+. .=|.+. ..|-+.++.|.+.--++.+....++....--+.... .+|.. |. T Consensus 68 ~g~lY~V~G~-----~LY~v~-----~~iGsiag~grVsMa~n~~~~av~~~g~~~~Y~y~~~v~t~~~~~~-----d~- 131 (472) T protein:vir:17 68 QNAVYRVCGG-----KLYKGE-----SEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPT-----DS- 131 (472) T ss_pred CCeEEEEecc-----eEeeee-----cceecccCcccEEEecCCcEEEEEECCceeEEEeeccchhhhcccc-----cc- Confidence 3334344332 112222 135556666665555555443333321111122111 11211 11 Q ss_pred ccCccccCCCceEEEEEcCeeEEecCC--EEEEEecCCccccccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEE Q lcl|Aclame:pro 345 NPYPSFTGQTINDIFFFRNRLGFLSGE--NIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLL 422 (801) Q Consensus 345 ~p~psf~g~~p~~v~f~q~RL~~~~~~--~v~~S~~gd~~nF~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~ 422 (801) .+|-...+....|+|+.+|++|.-|. .++.|...|-+.. ++.-.++.+..+++.|.-++...+.|++ T Consensus 132 -~~~~~dlg~~~dv~f~dGyfV~~~~Gt~~~~is~l~d~~~~----------~~y~~fa~AE~~pD~Ivgi~~~~~~i~l 200 (472) T protein:vir:17 132 -GFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHP----------DRYSAQYRAESQPDGIIGIGTWRDFIVC 200 (472) T ss_pred -ccccccccceeeeeeecceEEEeccCcceEEEeccCCcccc----------ccccccccccCCCCceEEEEeeccEEEE Confidence 12222235677899999999998743 3445655553221 2222345577888888888999999999 Q ss_pred EecCcE--EEEeCCccccccceEEEEEe----eeccccCCCcEEeCCeEEEEEcCCCeE-EEEEEeeecccccceehhhH Q lcl|Aclame:pro 423 WSDQAQ--FVLTASGILSSRSVELNLTT----QFDVQDRARPHGVGRNVYFASPRASFT-SINRYYAVQDVSSVKNAEDM 495 (801) Q Consensus 423 ~t~~~q--~~~~~~~~lTP~~~~i~~~s----~~~~~~~~~Pv~vg~~v~fv~~~g~~~-~v~~~~~~~~~~~~~~~~dl 495 (801) |.+..- |..+|+...+- +-..+++ ..+|++.=.=..+|++++|+......- .|+. .++|+++-| T Consensus 201 fG~~TiEvw~ntG~a~~~~--fpy~r~~g~~iq~Gcaa~~sv~~~~~t~~~l~~d~~g~~~V~~-------~~g~~~~rI 271 (472) T protein:vir:17 201 FGSSTIEYFSLTGATTVGA--ALYVAQPSLMVQKGIAGTYCKTPFADSYAFISNPATGAPSVYI-------IGSGQVSPI 271 (472) T ss_pred EeccceEEEEeeCCCCCCc--CceeecCcceeeecccCcchhhecCceEEEEecCCccccEEEE-------ccCceeEEe Confidence 988776 77777633221 1122221 357887767789999999998863211 2322 245677777 Q ss_pred HHH-HHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCCeEEEEEEEcCCEEEEEEEe Q lcl|Aclame:pro 496 TAH-VPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMGN 574 (801) Q Consensus 496 s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~~~~~~~~~~~d~l~~vv~r 574 (801) |-| +.+.|..-- .-.-.+.+.+-...+-..+|+++| +.+ -|-+|..-..-+ +=|.+-+ T Consensus 272 ST~aIE~~i~~y~----~~e~~dA~~~t~~~~GH~fy~Ltf----P~~------Tw~yD~~t~~Wh------erw~~~~- 330 (472) T protein:vir:17 272 SSASIEKILRSYT----ADELADGVMESLRFDAHELLIIHL----PRH------VLVYDASSSANG------PQWCVLK- 330 (472) T ss_pred cCHHHHHHHHhcC----CccccceeEEEEEeCCeEEEEEEc----CCc------eeEeecccccCc------eeeeeec- Confidence 544 333333321 000111222222233445566665 311 222322110000 0011100 Q ss_pred CCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccccceEEEEecCCccccceeec Q lcl|Aclame:pro 575 EHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPI 654 (801) Q Consensus 575 ~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~ 654 (801) .+...+++.-. ...+.|....+. ++++|... .+...... T Consensus 331 -~g~~~~~~Ra~----------~~~~~~g~~~vG-----------------------D~~ng~ly-~ld~~~~t------ 369 (472) T protein:vir:17 331 -TGLYDDVYRAI----------DFIYEGNQITCG-----------------------DKLESVTG-KLQFDISS------ 369 (472) T ss_pred -CCCccCceEEE----------EEEEeCCeEEEE-----------------------EcCCCeEE-EEcccCcC------ Confidence 00111111000 001122111110 01111110 00000000 Q ss_pred cccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCCCccc Q lcl|Aclame:pro 655 NGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREF 734 (801) Q Consensus 655 ~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~ 734 (801) .-|-+.+....+ |.+.. +++ ||..+.+.+.-- - . +...+.. T Consensus 370 --------------------d~g~pi~~~~~~--p~~~~---~~~---------RV~d~el~~~tG-~-~---~~adp~~ 410 (472) T protein:vir:17 370 --------------------QYDKQQEHLLFT--PLFKA---DNA---------RVFDLEVESSTG-V-A---QYADRLF 410 (472) T ss_pred --------------------CCCceeEEEEec--ceeeC---CCc---------eEEEEEEeeeCC-c-c---cCCCceE Confidence 002222222222 22221 000 122222211100 0 0 0000000 Q ss_pred ccc-----cccccccccccccccccccccEEEEEEeecCce-EEEEEEECCcCCEEEEEEEEEEE Q lcl|Aclame:pro 735 IYT-----MAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQT-NLVTIESDASTPLNIIGCGWEGN 793 (801) Q Consensus 735 ~~~-----~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~-~~v~i~~~~P~P~tvlsi~~eg~ 793 (801) ... ..++.... ..++|--.......--.|..++ +.++|+-..|.|.+|++...+.. T Consensus 411 l~~~sDg~~~g~~~~~---~~~~~g~~~~R~~~~RlG~~r~~v~f~~~~~~~~~~~l~~a~~~~e 472 (472) T protein:vir:17 411 LSATTDGINYGREQMI---EQNEPFVYDKRVLWKRVGRIRKNVGFKLRVITKSPVTLSGCQIRIE 472 (472) T ss_pred EEcccCCcccchhhhh---hhccCcccccceeeeeeeeccccceEEEEEeecccceeeeeEEEeC Confidence 000 00111111 1111211122222222344443 45888888999999999988877 No 33 >protein:vir:105428 Length: 472 # NCBI annotation: gene 8 protein # Family: family:all:1540 # MgeID: mge:1556 # MgeName: Sf6 # Cross-refs: genbank:acc:NP_958184;genbank:gi:41057286;genbank:GeneID:2716675 Probab=93.98 E-value=0.0058 Score=32.86 Aligned_cols=419 Identities=11% Similarity=0.041 Sum_probs=155.9 Q ss_pred HHhhhhhcccceeeeeeccceEEEECCceEEEEe-CCCceeEEEEeecCCCccceeeeeeecccceecccee-------e Q lcl|Aclame:pro 198 LAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILA-PNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINA-------P 269 (801) Q Consensus 198 l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~-------~ 269 (801) |..-......... ....++-.....+-..|-.. ..+.+...+.+..|- ....+++..+ + T Consensus 1 m~~~~~pl~~G~~-~~~~~~d~~~~~pVN~~a~~~~~~~s~~~l~~tPGl------------~~~a~v~G~~RG~~~~~~ 67 (472) T protein:vir:10 1 MPIQQLPLMKGVG-KDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGI------------AKRSDVNGVSRGVEYNMA 67 (472) T ss_pred CCeeeeeeccCce-eeccccchhheeeeeeeeeccCCCcccceeecCCCc------------eeeccCCccccceEEEee Confidence 1110000000000 00000000011111111111 111112222222211 1112222222 2 Q ss_pred CCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEEEEecCCeEEeec-----cCcCccccCCccc Q lcl|Aclame:pro 270 DGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALVRASDGNFDFKV-----LEWGARTVGDDTT 344 (801) Q Consensus 270 ~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~-----~~w~~~~~gd~~s 344 (801) +|....|.+. .=|.+. ..|-+.++.|.+.--++.+....+.....--+.... .+|.. |. T Consensus 68 ~g~lY~V~G~-----~LY~v~-----~~iGsiag~grVsMa~n~~~~av~~~g~~~~Y~yd~~v~t~~~~~~-----d~- 131 (472) T protein:vir:10 68 QNAVYRVCGG-----KLYKGE-----SEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPT-----DS- 131 (472) T ss_pred CCeEEEEecc-----eEeeee-----cceecccCcccEEEecCCcEEEEEECCceeEEEeeccchhhhcccc-----cc- Confidence 3333344332 112222 124555566654444444333222211110122111 11211 11 Q ss_pred ccCccccCCCceEEEEEcCeeEEecCC--EEEEEecCCccccccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEE Q lcl|Aclame:pro 345 NPYPSFTGQTINDIFFFRNRLGFLSGE--NIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLL 422 (801) Q Consensus 345 ~p~psf~g~~p~~v~f~q~RL~~~~~~--~v~~S~~gd~~nF~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~ 422 (801) .+|-...+....|+|+.+|++|.-|. .++.|...|-+.. ++.-.++.+..+++.|.-++...+.|++ T Consensus 132 -~~p~~dlg~~~dv~f~dGyfV~~~~Gt~~~~is~l~d~~~~----------~~y~~fa~AE~~pD~Ivgi~~~~~~i~l 200 (472) T protein:vir:10 132 -GFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHP----------DRYSAQYRAESQPDGIIGIGTWRDFIVC 200 (472) T ss_pred -ccccccccceeeeeeecceEEEeccCcceEEEeccCCcccc----------ccccccccccCCCCceEEEEeeccEEEE Confidence 12222235677899999999998643 3445655553221 2222345577888888888999999999 Q ss_pred EecCcE--EEEeCCccccccceEEEEEe----eeccccCCCcEEeCCeEEEEEcCCCeE-EEEEEeeecccccceehhhH Q lcl|Aclame:pro 423 WSDQAQ--FVLTASGILSSRSVELNLTT----QFDVQDRARPHGVGRNVYFASPRASFT-SINRYYAVQDVSSVKNAEDM 495 (801) Q Consensus 423 ~t~~~q--~~~~~~~~lTP~~~~i~~~s----~~~~~~~~~Pv~vg~~v~fv~~~g~~~-~v~~~~~~~~~~~~~~~~dl 495 (801) |.+..- |..+|+. +|+-+-..+++ ..+|++.=.=..+|++++|+......- .|+. .++|+++-| T Consensus 201 fG~~TiEvw~ntG~a--~~~~fpy~r~~g~~iq~Gcaa~~sv~~~~~t~~~l~~d~~g~~~V~~-------~~g~~~~rI 271 (472) T protein:vir:10 201 FGSSTIEYFSLTGAT--TAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISNPATGAPSVYI-------IGSGQVSPI 271 (472) T ss_pred EeccceEEEEecCCC--CcccCceeecccceeeecccCcchhhecCceEEEEecCCccccEEEE-------ccCceeEEe Confidence 988776 7777752 22222223322 357887766789999999998863211 2332 245566666 Q ss_pred HHH-HHHhcCCC----cEE--EEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEe-eecC--C----CeEEEE- Q lcl|Aclame:pro 496 TAH-VPNYIPNG----VFS--ISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSH-WDFG--D----NVTVFA- 560 (801) Q Consensus 496 s~~-~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~-w~~~--g----~~~~~~- 560 (801) |-| +.+.|..- +.+ +.+++.+...++.-..-+ .-+||.-- .+ -||. |-.. | ..+..| T Consensus 272 ST~aIE~~i~~y~~~e~~dA~~~t~~~~GH~fy~LtfP~-~Tw~yD~~-t~------~Wherw~~~~~g~~~~~~Ra~~~ 343 (472) T protein:vir:10 272 ASASIEKILRSYTADELADGVMESLRFDAHELLIIHLPR-HVLVYDAS-SS------ANGPQWCVLKTGLYDDVYRAIDF 343 (472) T ss_pred cCHHHHHHHHhcCCccccceeEEEEEeCCeEEEEEEcCC-ceeEeecc-cc------cCceeeeeecCCCccCceEEEEE Confidence 433 34444332 222 334444455433323333 33333311 11 3444 3221 1 122222 Q ss_pred ---------EEEcCCEEEEEEEe---CCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccc Q lcl|Aclame:pro 561 ---------AQVINSTMTVLMGN---EHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATI 628 (801) Q Consensus 561 ---------~~~~~d~l~~vv~r---~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~ 628 (801) .+..+..||.+--. ..+-.++++....-- .....++ +|..+......+. .. T Consensus 344 ~~~~g~~~vGD~~ng~ly~l~~~~~td~G~~i~~~~~~p~~---~~d~~Rv-~d~~ve~~~G~~~----~a--------- 406 (472) T protein:vir:10 344 IYEGNQITCGDKLESVTGKLQFDISSQYGLQQEHLLFTPLF---KADNARC-FDLEVESSTGVAQ----YA--------- 406 (472) T ss_pred EEeCCeEEEEEcCCCeEEEEcccCcCcCCCcceEEEeccce---eCCCCeE-EEEEEEeecCCCc----cc--------- Confidence 22234556665443 223334443332110 0111122 3433322211111 00 Q ss_pred cCcccccceEEEEecCCccccceeeccccccCc---EEEEc-CcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeee Q lcl|Aclame:pro 629 YGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDP---VLRLD-GNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATED 704 (801) Q Consensus 629 ~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~---~~~i~-~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~ 704 (801) .-.....+.||..........-...+. ++... ..+. .=-||+.+ ++. .|. T Consensus 407 ------dp~~~~~~sDg~~~g~~~~~~~~~~g~~~~R~~~~RlG~~--r~~vgf~~--r~~--~~~-------------- 460 (472) T protein:vir:10 407 ------DRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRI--RKNVGFKL--RVI--TKS-------------- 460 (472) T ss_pred ------CceEEEeccCCcccchhhhhhhccCcccccceeeeeeeec--cccceEEE--EEE--ecc-------------- Confidence 001122233332221111110000000 00000 0000 00123322 222 111 Q ss_pred eeeEEEEEEEEEee Q lcl|Aclame:pro 705 IGRLQLRRAWVNYE 718 (801) Q Consensus 705 ~~r~~i~~~~v~~~ 718 (801) ++.|..+++++. T Consensus 461 --~v~l~ga~~~~e 472 (472) T protein:vir:10 461 --PVTLSGAQIRIE 472 (472) T ss_pred --ccceeeeeEEeC Confidence 122444444444 No 34 >protein:vir:105563 Length: 396 # NCBI annotation: hypothetical protein # Family: family:all:27455 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164316;genbank:gi:56692963;genbank:GeneID:3197174 Probab=93.83 E-value=0.0062 Score=32.68 Aligned_cols=376 Identities=12% Similarity=0.042 Sum_probs=149.8 Q ss_pred Ccceeeechhhhcc--cccCcchHh----hhchhhhhhcceeeecCCceeCCcceEeeeecCCCccccccEEEEEEcCCC Q lcl|Aclame:pro 1 MALISQSIKNLKGG--ISQQPDILR----FAEQGSVQINGWSSESEGLQKRPPMIHLKTLGPAGYVGAQPYVHLINRDEF 74 (801) Q Consensus 1 Ma~v~~~~~~~~~G--vsqq~d~~r----~~~q~~~~~N~~~~p~gGl~rRpGt~~va~~~~~~~~~~~~~~~~~~~~~~ 74 (801) ||.+. +--|+|= |+.-.++.| -..-+++.+|+=.++.|=.+||-|.+-+....-.. .. ...++-+.+... T Consensus 1 ~~~~~--~~~~~ginnv~~e~~l~~~~~~~~~~~r~a~nvdi~~~G~~~~r~~~tr~~~g~l~~-~~-~~~~~~~~~~~~ 76 (396) T protein:vir:10 1 MATTS--LVPLAGINNVAEDAALQRGGESPRLYVRDAVNIDLSPAGKAQLRASVRQVTDQPFRQ-LW-QSPLHGDAFGAL 76 (396) T ss_pred Cccee--eeeeecccccccccccccCCCcccceeeeeeeecccCCCchhhhccCcccCCceecc-cc-cCccccceeeeC Confidence 88765 3333322 444444443 33459999999999999999999988874322110 00 001111111122 Q ss_pred cEEEEEEeCCeEEEEeCCCeEEEEe-cCCcccccCCCccceeEEEEcCEEEEecCceeeeEeecccccCCCCCCccEEEE Q lcl|Aclame:pro 75 EQYFVVFTGEDIKVFDLDGKEYQVR-GDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALIN 153 (801) Q Consensus 75 ~~y~l~~~~~~~rv~~~~g~~~~v~-~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (801) +.-++.+.++..++|-. +. +.. -+.+.+.+|.+|.++...|--+.. T Consensus 77 ~~tl~~~~~~~w~~~~~------v~v~~~----------pva~d~~~~Rvy~t~~~~p~~~~~----------------- 123 (396) T protein:vir:10 77 GDQWGKVDPHSWTFEPL------AQIGEG----------DLSHEVLNNRVCVAGTAGIFTYDG----------------- 123 (396) T ss_pred CceEEEEeCCeEEEEee------eeeccC----------chhccccCCeEEEEcCCCceeeeC----------------- Confidence 33444444444444311 11 111 233345667778776443322110 Q ss_pred ecCCCccceEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCC Q lcl|Aclame:pro 154 VRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPN 233 (801) Q Consensus 154 v~~g~y~~~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 233 (801) ...|.+.+.. | +.+...... ..+.. +... +.++ ++...+ T Consensus 124 ------~~~y~L~vp~--------P--~~a~~~a~~----------Gsl~~--~~~~-------Y~~t------~V~~~g 162 (396) T protein:vir:10 124 ------AQAERLTLDT--------P--APPLLVAGA----------GSLSQ--GTYG-------AAVA------WLRGPQ 162 (396) T ss_pred ------CcceecCcCC--------C--ccccccccc----------CccCC--ceEE-------EEEE------EEecCC Confidence 1112222211 0 000000000 00000 0000 0000 000000 Q ss_pred Cce---eEEEEeecCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEE Q lcl|Aclame:pro 234 NDN---VWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHL 310 (801) Q Consensus 234 ~~~---~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~ 310 (801) -.+ ..+.....+++ ..|.+....+.......+.....+|. | .-....+ T Consensus 163 EEs~p~~~S~~v~~~gg------------------------~~vtl~~~~~~~i~~~RiYrS~~~G~--~---~~l~aE~ 213 (396) T protein:vir:10 163 ESAPSLIAFAEVTDAGA------------------------LEVTFPLCLDASVTGARLYLTRANGG--E---LLLAGDY 213 (396) T ss_pred CcCcccccccccCCCCC------------------------cEEEEEcccCCCcceEEEEEeCCChh--h---hhheehh Confidence 000 00000001111 11111111111111111111111111 0 0000011 Q ss_pred ecCcceEEEEEecCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEecCCEEEEEecCCccccc-cccC Q lcl|Aclame:pro 311 YYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFF-PASV 389 (801) Q Consensus 311 ~~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~-~~t~ 389 (801) . ....+|.+...+|...-....-=-|.|.. .-+.||.+||+++.++.||+|...-++=++ +..- T Consensus 214 ~----------a~~~s~vlPs~~w~gpP~~~~gL~pmP~G-----~~~A~faGRi~~A~Gn~V~FSEp~~Ph~~~~~~~~ 278 (396) T protein:vir:10 214 P----------LGAATVILPTLPELGRPAQFRHLSPMPTG-----KHLAYWRGRLLIARANVLRFSEALAYHLHDERYGF 278 (396) T ss_pred c----------cceeeeeeecCCCCCCCccccccccCchh-----HhhhhhcceEEEEeCCEEEEecCCCCceecchhcc Confidence 1 11234445555675432111111123321 148899999999999999999999763221 1111 Q ss_pred CCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCcc--ccccceEEE---EEeee----ccccCCCcEE Q lcl|Aclame:pro 390 SNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGI--LSSRSVELN---LTTQF----DVQDRARPHG 460 (801) Q Consensus 390 ~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~~--lTP~~~~i~---~~s~~----~~~~~~~Pv~ 460 (801) .+ . ...|.-+.+.+.+|+++|+++-|.+.|.++ ++.+..... ..|.. .|.+.-..+. T Consensus 279 ~~------------~--~~~Iv~lapv~~gL~Vgt~~~~y~~~G~dP~sms~~~l~~~~pvp~S~v~~p~~~~s~rs~~~ 344 (396) T protein:vir:10 279 VQ------------M--PQRITFVQPVDGGIWVGQVDHVAFLDGADPASLSVSRRASRAPVPGSAVLVPAEVVGTNASPD 344 (396) T ss_pred CC------------C--CCceEEEEEecCeEEEEEcCcEEEEEcCChhHcceeecccCCCcccchhcccchhhhcccccc Confidence 11 1 123555677788999999999999998653 444333211 11110 0012233355 Q ss_pred eCCeEEEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEe Q lcl|Aclame:pro 461 VGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLY 537 (801) Q Consensus 461 vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~ 537 (801) .|..++|.++.|- .-- ..+. ....++. ..+.+.. ..++ . +.. .|+..++ ++. T Consensus 345 ~~~~~lwas~dGl----~~g--~~~G----~v~~l~~---~~i~p~~-~~A~-----~---~~~-~drRy~~--~~~ 396 (396) T protein:vir:10 345 GSPVAVWLAENGY----VMG--TSSG----AIAEVHA---GVLAGIT-GRAG-----T---SVV-FDRRLLT--AVS 396 (396) T ss_pred cCcEEEEccCCcE----EEE--cCCc----eeeeecc---cccCCCc-ccce-----E---EEe-ecCeEEE--EeC Confidence 6889999999983 211 1111 1111221 1122211 1111 0 001 1222221 110 No 35 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=92.93 E-value=0.0094 Score=31.69 Aligned_cols=613 Identities=10% Similarity=0.064 Sum_probs=182.5 Q ss_pred cEEEEE--EcCCCcEEEEEEeCCeEEEEeCCCeEEEEecCCcccccCCCccceeEEEEcCEEEEecCceeeeEee----- Q lcl|Aclame:pro 64 PYVHLI--NRDEFEQYFVVFTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSND----- 136 (801) Q Consensus 64 ~~~~~~--~~~~~~~y~l~~~~~~~rv~~~~g~~~~v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~----- 136 (801) +++..+ +|...|=-=...+...+.-|. +| .+. .-.++-+.|....=+--+ T Consensus 1 m~~~~~q~sF~~GElsP~l~gR~Dl~~y~-~g-----------------~~~-----~~N~~~~p~Gg~~rRpGt~fva~ 57 (825) T protein:vir:73 1 MAFSWIQPSFAGGEIGPSLYGRIDMSKYQ-VA-----------------LRK-----CDNFIVRQYGGVENRPGTRFVGP 57 (825) T ss_pred CccceeccccccceechhhcccchHHHHH-HH-----------------HHH-----hcCcEEEecCCceecCchHHhHh Confidence 111111 111111000001111100000 00 000 000111111110000000 Q ss_pred --------cccccCCCCCCccEEEEecCCCccceEE----EEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhh Q lcl|Aclame:pro 137 --------QSVNLPGFKDQGDALINVRGGQYGRRLS----IEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRN 204 (801) Q Consensus 137 --------~~~~~~~~~~~~~~~~~v~~g~y~~~y~----vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a 204 (801) |.-... ++.. ..++-.-+..|=+-|+ |.-++ ...+...+.........+...++++.+...|.. T Consensus 58 ~~~~~~~~rLipF~-fs~~-q~y~Lefg~~~lrv~~~gg~v~~~~--~~~~e~~TPy~~~~l~~l~~~QsaD~~~i~h~~ 133 (825) T protein:vir:73 58 AKYPDRKCRLIPFQ-FSTV-QTYALEFGHNYMRVIKDGAYVLTTS--NVIYELAMPYADTDLFRIKFTQSADVLTLVHPA 133 (825) T ss_pred hcCCCCCEEEEEEE-eCCC-cEEEEEEeCCeEEEEeCCceEeccC--CceEEEecccchhhhhhheeeeecCEEEEEcCC Confidence 000000 0000 0010000111100000 11011 122333333444556666677788887777777 Q ss_pred cccceeeeeeccceEEEECCce------------EEEEeCCCceeEEEEeecCCCccceeeeeeecccceeccceeeCCe Q lcl|Aclame:pro 205 NLGNPNNDQDPNKWRFNVGPGF------------IHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAPDGY 272 (801) Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~------------~~i~~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~~g~ 272 (801) ..+....+...+.|.+...... ..+.+.+.....+++.+....+. .-.|. T Consensus 134 ~pp~~L~r~~~~~W~l~~~~f~~gp~~~in~~~sv~v~asg~tg~~TiTaS~a~~~~------------------~~vG~ 195 (825) T protein:vir:73 134 YPPKELRRYAHDNWQIVDVTTKNGPFEDINVDETVKVYASASTGTITLTASSAIFGA------------------EQVGK 195 (825) T ss_pred CceeEEEEecCCCcEEEEEeccCCccccccccccceeeecccCceeEEEeeccccCc------------------hhcCe Confidence 7777777777777776543211 11111111111111111100000 00122 Q ss_pred EEEeeccCCCccc-------------------eeEEEEccC----------ceeEEEeeccceeeEEecCcceEEEEEec Q lcl|Aclame:pro 273 IVKIVGDTSKTAD-------------------QYYVRFDLN----------RKVWVETIGWNTRTHLYYHTMPWALVRAS 323 (801) Q Consensus 273 ~v~i~~~~~~~~~-------------------~yyv~~~~~----------~~~W~e~~~~~~~~~~~~~t~p~~lv~~~ 323 (801) .+.+......... .|......+ ...|....+.+. +.......+++.. T Consensus 196 ~i~~~~~~v~si~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~t~~~~a~~g~~~~~~~g~~~----~~~~~~~~~~~~~ 271 (825) T protein:vir:73 196 LFYLEQPAVDSVPVWETSKTTAINDVRRADSNYYRANTSGKTGTLRPSHTEGMSWDGWGGTGS----DDTGIQWEYLHSG 271 (825) T ss_pred EEEEecccccccceeeeeeEEEeeeEEECCCceeeeecccccceeeccccCCceeEeeeeecc----cCCceEEEEEecC Confidence 2222111110000 000000000 001111100000 0000011111111 Q ss_pred CCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEecCCEEEEEecCCccccccccCCCCCCCccEEEEE- Q lcl|Aclame:pro 324 DGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAV- 402 (801) Q Consensus 324 ~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~~~~- 402 (801) .+.+.+.... + +. ...+++=.+|....... ..+...+... T Consensus 272 ~g~~~it~~~-----------------------------------~-~~--~~~~~~~~~~~~~~~~~-~~~~t~~~~~~ 312 (825) T protein:vir:73 272 FGIAKITAVA-----------------------------------G-DG--LTATADVVSFIPSQVVG-SANASYKWAKY 312 (825) T ss_pred CceEEEeecc-----------------------------------c-cc--eeeccccceeccccccc-CCCCCcccccC Confidence 1111111100 0 00 01222222222211100 0000011111 Q ss_pred ----cCCcceEEEEEeecCCcEEEEec--CcEEEE-e--CC-ccccccce-----EEEEEeeeccccCCCcEEeCCeEEE Q lcl|Aclame:pro 403 ----SHNRVSTLKYAVPFSEELLLWSD--QAQFVL-T--AS-GILSSRSV-----ELNLTTQFDVQDRARPHGVGRNVYF 467 (801) Q Consensus 403 ----~~~~~~~i~~~~~~~~~L~~~t~--~~q~~~-~--~~-~~lTP~~~-----~i~~~s~~~~~~~~~Pv~vg~~v~f 467 (801) ....+..+ .-++.-|+++.. ..|.+. | |+ .-+.|+++ .|....+-.-.+.++=+.-.+.+++ T Consensus 313 ~~~~~~gyPs~v---~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~s~~~~~~i~~~~~~~~L~~ 389 (825) T protein:vir:73 313 AWNSVNGYPSTV---VYYQQRLYFAASTAYPQTIWASRTGDYKDFGKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGNLVA 389 (825) T ss_pred CcccCCCCccEE---EEEcceEEEeecCCCCCEEEEEccCCccccccCCCCCCCccEEEEEcCCcceeEEEEeecCcEEE Confidence 11112222 223334555533 334443 2 21 12333331 1222211111222333333445555 Q ss_pred EEcCCCeEEEEEEeeeccccc--ceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCC---ce Q lcl|Aclame:pro 468 ASPRASFTSINRYYAVQDVSS--VKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDE---EI 542 (801) Q Consensus 468 v~~~g~~~~v~~~~~~~~~~~--~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~---e~ 542 (801) -..++++ .+ .....+ ++....+..+-.. | +..+.-..-.+.+ +++.+....+.-|.|-.... -+ T Consensus 390 ~t~~~e~----~l--~~~~~~~lTP~~~~~~~~s~~---g-~~~~~Pv~vg~~~-~Fv~~~g~~vre~~~~~~~d~~~~~ 458 (825) T protein:vir:73 390 LTSGGEY----TI--SGDQNKVLTPSAFSFSSQGNN---G-SSNVPPIAVANIA-LFIQEKGSVVRDLAYSFDVDGYQGT 458 (825) T ss_pred EecCceE----EE--ecCCCcccceeeEEEEeeeee---c-cccccceEeCCeE-EEEeCCCCeEEEEEEeeecCceecc Confidence 5665543 11 111111 2222222221110 1 1111111122333 34444545666665532221 11 Q ss_pred eEEeEEeeecCCC-eEEEEEEEcCCEEEEEEEeCCCEEEEEEEEeec--------------------------------- Q lcl|Aclame:pro 543 RQQSWSHWDFGDN-VTVFAAQVINSTMTVLMGNEHAVWMGRLHFTKN--------------------------------- 588 (801) Q Consensus 543 ~v~aW~~w~~~g~-~~~~~~~~~~d~l~~vv~r~~~~~~~r~~~~~~--------------------------------- 588 (801) +++.=+.|-+.|. +..++.....+.+.++++-++....-.|.-..+ T Consensus 459 dlt~~a~hl~~~~~~~~~a~~~~p~~~~~~v~~dg~l~~~ty~~~q~v~aW~~~~~~g~v~~~~~i~~~~~D~l~~iV~R 538 (825) T protein:vir:73 459 DLTILANHLFQKHSIVDWSFCIVPYSSAFCIRDDGKLLVLTYLRDQQVFAWAPQSSAGKYESTCSISEGSEDAVYFVVNR 538 (825) T ss_pred chhhhhHhhccCCceEEEEEcCCCceEEEEEecCCeEEEEEEeccccceeeEEEecCCcEEEEEEecCCCccEEEEEEEE Confidence 2222335556542 222222122222322232222222111110000 Q ss_pred CCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccccceEEEEecCCccccceeeccccccCcEEEEcCc Q lcl|Aclame:pro 589 SIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGN 668 (801) Q Consensus 589 ~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~ 668 (801) ..+.....+..+|+.... ......+..++..+....+..+||.||+|++|.+.+||.+ ...+.+| .++++- T Consensus 539 ~~~g~~~~yiE~~~~~~~-~~~~~~~~vD~g~~~~g~~~~~~l~~l~g~tv~~~~~g~~--~~~v~~g-----~itl~~- 609 (825) T protein:vir:73 539 TINGQTVRYIERLSSRLF-TNDEDAFFVDCGLSYDGRNTSSRTMTISGGTGDWSYQVDY--PVTVSGG-----AYFVNT- 609 (825) T ss_pred eeCCceEEEEEEeccccc-CCCcceeEEEEEeeecccceeeceeeeCCceEEEEeCCeE--EEEEcCC-----eEEecc- Confidence 000001111111111110 0011111222222223334568999999999999999976 2344444 344442 Q ss_pred ccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEE-EEEEEEEeecc--ccEE-EEeCCCCc--cc---ccccc Q lcl|Aclame:pro 669 QEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQ-LRRAWVNYEDS--GAFT-IRVNNLSR--EF---IYTMA 739 (801) Q Consensus 669 ~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~-i~~~~v~~~~t--g~~~-~~v~~~~~--~~---~~~~~ 739 (801) +. .++|||+|......+++.... + ......+.+ -..+.++.... ..|. +.....+. .. +-.+. T Consensus 610 -~~-~~~i~l~~~~~~~~~~~~~~~----~--~~~~i~~~~~~~~v~v~~~~~~~a~~~~~~~t~~~~a~~~~~gL~hLe 681 (825) T protein:vir:73 610 -DV-GAQIQFPYTGTDPDTNEPVAK----E--LRGDIISVTSNTAVVVRFNRNVPPVLRNVATTNWQMARQTFSGLAHLE 681 (825) T ss_pred -cc-eEEEEecccCcccccccceec----e--eeEEEccccCceEEEEEecccccceeeeecccCCCcchheeccccccC Confidence 22 578999999887666554321 1 111111111 01111111111 0000 00011110 00 01122 Q ss_pred cccc---cccccccccccccccEEEEEEeecCceEEEEE---EECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 740 GARL---GSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTI---ESDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 740 ~~~~---~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i---~~~~P~P~tvlsi~~eg~y~~r~rr~ 801 (801) |+.+ .+.....+. ....|.+++|-. ...+.+-+ .--.|||..+.+ .|.--.|.||| T Consensus 682 G~~v~v~~Dg~~~~~~-~V~~G~vtl~~~--~~~v~vGl~y~~~~~~l~~~~~~---~g~~~g~~~ri 743 (825) T protein:vir:73 682 GQTVNILSDASVEPQK-TVTGGAVTLESP--GAVVHIGLPITAEFETLDINING---QETLLDKKQVI 743 (825) T ss_pred CceEEEEECCeeeCCe-EecCcEEEecCC--ceEEEEeeCccceEEecccccCC---CccccCccEEE Confidence 2222 111111111 123466666532 11121111 122566666543 36666788888 No 36 >protein:vir:108312 Length: 458 # NCBI annotation: hypothetical protein # Family: family:all:1540 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552278;genbank:gi:160700603;genbank:GeneID:5758828 Probab=92.67 E-value=0.01 Score=31.44 Aligned_cols=415 Identities=11% Similarity=0.110 Sum_probs=165.3 Q ss_pred HHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCceeEEEEeecCCCccceeeeeeecccceeccceee------CC Q lcl|Aclame:pro 198 LAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYTQSFQKLPINAP------DG 271 (801) Q Consensus 198 l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~~~------~g 271 (801) |.....- .+. +......+.... .+..++. ..+++.+...++... ....+.++|.... +| T Consensus 1 m~~~~ip-~gs--y~a~~~~~daq~---~VN~yp~--------~~e~g~ss~~l~~tP-Gl~~f~~~~~~~~~g~~~~~g 65 (458) T protein:vir:10 1 MVQRQIP-LVA--TTAEGDVSGQEI---LVNVYPR--------KSDGGKYPFTLRHTP-GLAFFCELPTFPVMAMHQNGS 65 (458) T ss_pred Cceeeec-eee--eeccccccccee---eeeeeee--------cccccccccceEecC-CceeeecCCCCceeeEEecCC Confidence 1100000 000 000000010000 0000000 001111111111111 1111223333222 22 Q ss_pred eEEEeeccCCCccceeEEEEccCceeEEEe---eccceeeEEecCcceEEEEEecCCeEEeeccCcCccccCCc-ccccC Q lcl|Aclame:pro 272 YIVKIVGDTSKTADQYYVRFDLNRKVWVET---IGWNTRTHLYYHTMPWALVRASDGNFDFKVLEWGARTVGDD-TTNPY 347 (801) Q Consensus 272 ~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~---~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~-~s~p~ 347 (801) ....+++. ..| -..++++-.|. ++.|.+.-.++++. .++.....-+.. ..+++. ..+.+ T Consensus 66 ~ly~v~g~------~LY--~V~~~~~~~~iG~i~gsg~VsMa~ng~q--~vi~~G~~gY~y-------d~at~~~~~i~d 128 (458) T protein:vir:10 66 RAFAVTPR------DMY--EISKDGTYKRLGSVDFKGRVVMEDNGKQ--IVMVDGEKGYYY-------DSETEIVQEIKA 128 (458) T ss_pred EEEEeeCc------eEE--EEeCCceEEEEecccCceeEEEeeCCcE--EEEEECCeEEEE-------eecccEEEeccC Confidence 22333331 111 12222222222 23444444444431 111111111111 111111 11223 Q ss_pred ccccCCCceEEEEEcCeeEEec--CCEEEEEecCCccccccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEec Q lcl|Aclame:pro 348 PSFTGQTINDIFFFRNRLGFLS--GENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSD 425 (801) Q Consensus 348 psf~g~~p~~v~f~q~RL~~~~--~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~ 425 (801) +.| ..+..|.|..+|++|.. ...++.|...| . --||++++-+..+++.|.-++...+.|++|.+ T Consensus 129 ~~~--~~~~~v~~~dGy~V~~~~g~~~~~is~L~d------~------s~d~l~fa~Ae~~pD~iv~i~~~~~~i~~fG~ 194 (458) T protein:vir:10 129 EGF--YPASTVTYQDGYFIFDRKGTGQFFISELLD------V------AFDPLDFATAEGQPDPLLAVLSDHREVFMFGQ 194 (458) T ss_pred ccc--cCcceEEEeCcEEEEEeeCCCEEEEEecCc------c------eeCcceeeeecCCCCceEEEEeeccEEEEEec Confidence 334 34789999999999884 45677775444 1 15699999999999999999999999999988 Q ss_pred CcE--EEEeCCccccccceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEEEeeecccccceehhhHHHHH-HHh Q lcl|Aclame:pro 426 QAQ--FVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHV-PNY 502 (801) Q Consensus 426 ~~q--~~~~~~~~lTP~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~-~~~ 502 (801) ..- |..+|+..+.=.......+ ..+|++.=.=..+|++++|+...+ .|+.. ++|+++-+|-|+ .+. T Consensus 195 ~TiEvw~ntG~a~fpy~r~~ga~i-~~Gcaa~~sv~~~~~t~~~l~~d~---~Vy~l-------~g~~~~rIST~aIE~~ 263 (458) T protein:vir:10 195 ETIEVWYNSGAADFPFERNQGAFI-EKGIGAPYSVAKTNNTVYFIGSDL---MIYQI-------TGYTPVRISTHAVEQT 263 (458) T ss_pred cceEEEEecCCCCcceeeccccee-eecccCcchhhhhCceEEEEcCCe---EEEEe-------cCceeEEeeCHHHHHH Confidence 776 7777763222111110111 347877766689999999999875 34433 355666555443 222 Q ss_pred cCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEec------CCceeEEeEEeeecCC--CeEEEEEEEcCCEEEEEEEe Q lcl|Aclame:pro 503 IPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYI------DEEIRQQSWSHWDFGD--NVTVFAAQVINSTMTVLMGN 574 (801) Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~------~~e~~v~aW~~w~~~g--~~~~~~~~~~~d~l~~vv~r 574 (801) |.. +.-.+...+-...+-..+|+++|-.. |-.. ..||.-+..+ ..+..|+ T Consensus 264 i~s-------y~~~da~a~t~~~eGH~fy~LtfP~a~~Tw~yD~~t--~~Wher~Sg~~~~~Ra~~~------------- 321 (458) T protein:vir:10 264 LKG-------VNLSDAFAYTYQSEGHLFYVLTIPGKNLTWCYDISS--GSWHVRQSYQFDRHVSNNS------------- 321 (458) T ss_pred Hhc-------CChhheEEEEEEecCeEEEEEECCCCCceeEEeccc--ccceeeccCCCCceEEEEE------------- Confidence 222 22222222222334455666665200 0011 1244422211 0111111 Q ss_pred CCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccccceEEEEecCCccccceeec Q lcl|Aclame:pro 575 EHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPI 654 (801) Q Consensus 575 ~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~ 654 (801) .+.|....+ + ++++|.... +.+.... T Consensus 322 ------------------------v~~~g~~~v---G--------------------D~~ng~ly~-ld~~~~t------ 347 (458) T protein:vir:10 322 ------------------------IYFDQKTLV---G--------------------DFQNGRIYI-MADNYYT------ 347 (458) T ss_pred ------------------------EEeCCeEEE---E--------------------EcCCCeEEE-EcccCcC------ Confidence 111111100 0 011111100 0000000 Q ss_pred cccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEE------------------ Q lcl|Aclame:pro 655 NGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVN------------------ 716 (801) Q Consensus 655 ~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~------------------ 716 (801) . -|-+.+..+.+ |.+. ....|++++++.|. T Consensus 348 ---------------d-----~g~~i~~~~~~--p~~~----------~~~~rl~~~~~el~~~tGvg~~~~~~~~p~~~ 395 (458) T protein:vir:10 348 ---------------D-----DGDPVVREFIL--PVVN----------NGREFLTVDSLELDLSSGVGLTVGQGSDPELR 395 (458) T ss_pred ---------------C-----CCceeeeeeec--ccee----------CCCCeEEEEEEEEEEecceeeeeCCCCCceEE Confidence 0 01111121111 1110 00112333333332 Q ss_pred --eeccccEEEEeCCCCcccccccccccccccccccccccccccEEEEEEeecCceEEEEEEECCcCCEEEEEEEEEEE Q lcl|Aclame:pro 717 --YEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGRSNIGTGQYRFPVVGNAQTNLVTIESDASTPLNIIGCGWEGN 793 (801) Q Consensus 717 --~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~~vp~~~~~~~~~v~i~~~~P~P~tvlsi~~eg~ 793 (801) +.++++.... ++.... ..|++--....+..-=.|..++--++|+-.+|.|.+|+++..+-+ T Consensus 396 l~~S~d~g~~~s-----~~~~~~-----------~lg~~gey~tr~~~~rlG~ar~rvf~v~~s~p~~~~l~ga~~~~r 458 (458) T protein:vir:10 396 VYFSKDNGNEYS-----QNFKVG-----------KIGRKGEFLTRAKVNRFGCARQFTFKVEISDPIPVDIGGAWVEVR 458 (458) T ss_pred EEEeeCCCcccc-----hhHHHh-----------hcCCcchhhhhhhhhhhccCcceEEEEEEecchhhcceeeeEEeC Confidence 2233332221 000000 112222222222222235555555999999999999999999988 No 37 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=74.04 E-value=0.16 Score=24.90 Aligned_cols=654 Identities=8% Similarity=0.033 Sum_probs=186.4 Q ss_pred cEEEE--EEcCCCcEEEEEEeCCeEEEEeCCCeEEEEecCCcccccCCCccceeEEEEcCEEEEecCceeeeEeeccccc Q lcl|Aclame:pro 64 PYVHL--INRDEFEQYFVVFTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSNDQSVNL 141 (801) Q Consensus 64 ~~~~~--~~~~~~~~y~l~~~~~~~rv~~~~g~~~~v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~~~~~~ 141 (801) +++.. -+|.+.|=-=...+...+.-|. +|.....++-...-.-...+.-.+++-. +.+++-+.+-+.- T Consensus 1 m~i~~~q~sF~~GElsP~l~gR~Dl~ry~-~q~~~~~N~~~~~~GGl~rRpGt~fva~-----~~~~~g~~rLipf---- 70 (823) T protein:vir:95 1 MAISWIQPSFAGGEIGPSLYGRIDMAKYQ-VALRKCDNFIVRQYGGVENRPGTRFVGA-----AKYPNRKCRLIPF---- 70 (823) T ss_pred CcceeechhccCceechheeccchHHHHH-HHHhhhhCcEeeecCCceecCchhhhhh-----hcCCCCCeeEEEE---- Confidence 11111 1111111000001111110000 1100001100000000000000111100 0001100000000 Q ss_pred CCCCCCccEEEEecCCCccceEE----EEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccc Q lcl|Aclame:pro 142 PGFKDQGDALINVRGGQYGRRLS----IEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNK 217 (801) Q Consensus 142 ~~~~~~~~~~~~v~~g~y~~~y~----vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~ 217 (801) .++. ...++-.-+..|=+-|+ |...+ ...+.+++.........+...++|+.+..-+....+....+...+. T Consensus 71 -~~s~-~q~y~Lefg~~~irV~~~~g~vv~~~--~~~~ev~tPy~~~~l~~Lr~~qsaD~~fivh~~~~p~~L~r~~~~~ 146 (823) T protein:vir:95 71 -QFST-VQTYALEFGHQYMRVIKDGALVLNSS--NVIYEIATPYTEADLFRIKFTQSADVLTLVHPAYPPKELRRYAHDN 146 (823) T ss_pred -EeCC-CcEEEEEEcCCeEEEEeCCcEEEecC--CceeEEecccccccccceeEEEeccEEEEEcCCccceEEEecCCCC Confidence 0000 01111111111111110 10011 1122233333444455666677777777777766666666666666 Q ss_pred eEEEECCceEEEEeCCCceeEEEEee-cCCCccceeeeeeecccceeccceeeCCeEEEeeccCCCccceeEEEEccCce Q lcl|Aclame:pro 218 WRFNVGPGFIHILAPNNDNVWGLQTK-DGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRK 296 (801) Q Consensus 218 ~~~~~~~~~~~i~~~~~~~~~t~t~~-dg~~~t~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~ 296 (801) |.+........-... -....+.... ++...... .++..+.......|....+....... -. T Consensus 147 w~l~~~~~~~gp~~~-~~~~~t~~v~~~~~~~~~t------~ta~~~~~~~d~vg~~~~l~~~~~~~-----------~~ 208 (823) T protein:vir:95 147 WQLVDVVTKNGPFED-INIDESLTVYASASTGTIT------LTASASIFGAEQVGKLFYLEQPAVDS-----------VP 208 (823) T ss_pred ceEEEEEEecccccc-ccccceeEEeccccCceeE------EeecccccchhhccceEEEeccccce-----------ee Confidence 665432110000000 0000011110 00000000 00000000000001111110000000 00 Q ss_pred eEEE--eeccceeeEEecCcceEEEEEecCCeEEeecc---CcCcc-ccCCcccccCccccCCCceEEEEEcCeeEEecC Q lcl|Aclame:pro 297 VWVE--TIGWNTRTHLYYHTMPWALVRASDGNFDFKVL---EWGAR-TVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSG 370 (801) Q Consensus 297 ~W~e--~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~---~w~~~-~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~~ 370 (801) .|.. ....+....... ..+..+.....++...... -|... .+++++..-.+.+.+ ..=+.. . T Consensus 209 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~g~~-~ 276 (823) T protein:vir:95 209 VWETSKSTSIGDIRRADS-NYYRAVTAGKTGTLRPSHTEGTSWDGWGGSGDDDTGIEWEYLH----------SGFGIA-R 276 (823) T ss_pred ecceeeeecccceEEecc-cceeeeeccccceeecccCCcceEEeceecccccceeEEEEEe----------CCcceE-E Confidence 0100 000000000000 0000000000011000000 00000 000000000001100 000000 0 Q ss_pred CEEEEEecCCcc--ccccccCCCCCCCccEE-----EEEcCCcceEEEEEeecCCcEEEEecC--cEEEEeC--Cc--cc Q lcl|Aclame:pro 371 ENIILSRTSKYF--NFFPASVSNYSDDDPID-----VAVSHNRVSTLKYAVPFSEELLLWSDQ--AQFVLTA--SG--IL 437 (801) Q Consensus 371 ~~v~~S~~gd~~--nF~~~t~~~~~d~d~i~-----~~~~~~~~~~i~~~~~~~~~L~~~t~~--~q~~~~~--~~--~l 437 (801) .+..-+.+++-. -|.++.... ..+...+ +......+.. +.-++.-|+++... -|++.-+ ++ -+ T Consensus 277 ~t~v~~~~~~~~~~~~~~~~~~~-~~~~t~~~~~~~~~~~~g~Ps~---v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF 352 (823) T protein:vir:95 277 ITAVNGTTATAEVISYIPSQVVG-EDNASYKWAKYAWNSVNGYPGT---VVYYQQRLYFAASTAFPQTIWASRTGDYKDF 352 (823) T ss_pred EEeecceeeeceEeeeecccccc-CCcCCccccccccCcCCCCccE---EEEEeceEEEEEcCCCCcEEEEeccCCcccc Confidence 000001111100 111110000 0111111 1101111211 22333345555442 2444422 11 12 Q ss_pred cccce-----EEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEEEeeeccccc--ceehhhHHHHHHHhcCCCcEEE Q lcl|Aclame:pro 438 SSRSV-----ELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSS--VKNAEDMTAHVPNYIPNGVFSI 510 (801) Q Consensus 438 TP~~~-----~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~--~~~~~dls~~~~~~~~~~~~~~ 510 (801) .|+++ .|....+-.-.+.++=+.-.+.++....++.+ .+ ..+..+ ++....+..+ ..+ | +..+ T Consensus 353 ~~~~~~~DdD~I~~~~s~~~~~~i~~~v~~~~Lli~t~~~e~----~l--~~~~~~~lTP~~~~~~~~-s~~--g-~~~~ 422 (823) T protein:vir:95 353 GKSNPTQDDDRIIYTYAGRQVNEIRHLIDVGSLVALTSGGEY----VI--TGDQNKVLTPSSFAFSSQ-GSN--G-SSNV 422 (823) T ss_pred ccccCCCCCCcEEEEEcCCcceEEEEEeecCcEEEEecCcEE----EE--EcCCCcccceeeEEEEEe-ecc--c-cccc Confidence 22221 12222211112234333444556666665543 21 111111 2222222222 111 1 1111 Q ss_pred EEeCCCCeEEEEEEcCCCeEEEEEEEecCCc---eeEEeEEeeecCCC-eEEEEEEEcCCE-EEEEEEeCCCEEEEEEEE Q lcl|Aclame:pro 511 SGTTAENFAAILTSGAPNRVYIYKFLYIDEE---IRQQSWSHWDFGDN-VTVFAAQVINST-MTVLMGNEHAVWMGRLHF 585 (801) Q Consensus 511 ~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e---~~v~aW~~w~~~g~-~~~~~~~~~~d~-l~~vv~r~~~~~~~r~~~ 585 (801) ....--+.+ +++.+....+.-|.|-..... ++++-=+.|-+.+. +..+|.....+. +|+ ++-++....-.|.. T Consensus 423 ~Pv~vg~~~-~Fv~~~g~~vre~~~~~~~d~~~~~dlT~~a~hl~~~~~i~~~a~~~~p~~~~~~-v~~dG~l~~~ty~~ 500 (823) T protein:vir:95 423 PPIAVANIA-LFVQEKGSVVRDLAYSFDVDGYQGNDLTILANHLFQKHSIVDWCFSIVPYSSAFC-IRDDGKLLVMTYLR 500 (823) T ss_pred cceEeCCeE-EEEecCCCEEEEEEEeeecCceecchhhhhhhhhcCCCceEEEEEecCCCeEEEE-EecCCcEEEEEEec Confidence 111122333 344444455655555332211 12222235555442 222222222222 333 22222221111110 Q ss_pred eec---------------------------------CCCCCcCcceeeeeee-------eEEeeccccccccccce-eec Q lcl|Aclame:pro 586 TKN---------------------------------SIDIPGEPYRLYIDAK-------RKYTIPAGTYNDDTYQT-SIS 624 (801) Q Consensus 586 ~~~---------------------------------~~~~~~~~~~~~lD~~-------~~~~~~~~t~~~~~~~~-~~~ 624 (801) ..+ ..+.....+..+++.. ..+-.|+.+|.+.+... ... T Consensus 501 ~q~v~aW~~~~~~g~~~~~~~i~~~~~d~l~~~v~R~i~g~~~~yiE~~~~~~~~~~~~~~~lD~~~s~~g~~~~~~~~~ 580 (823) T protein:vir:95 501 DQQVFAWAPQSSTGKYESTCSISEGNEDAVYFVVNRTVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSYDGRNTSDRTMT 580 (823) T ss_pred ccceeeeEEEecCCcEEEEEEecCCCCCEEEEEEEeccCCeEEEEEEeeccccCCCccceeEEEEEEEeecCcccceeeE Confidence 000 0000111111111111 11122333343322111 111 Q ss_pred cc-cccCcccccceEEEEecCCccccceeeccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeee Q lcl|Aclame:pro 625 LA-TIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATE 703 (801) Q Consensus 625 ~~-~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~ 703 (801) +. ....+.|++++++.+ +||.+.+...+ ++ .++ ..++++.+++|++|+++++++++.++.. ..... T Consensus 581 l~~g~~~l~~l~g~~v~~-adg~~~~~~~v-~g-----~i~--l~~~~~~~~vGl~~~~~i~~~~~~v~~~----~a~~~ 647 (823) T protein:vir:95 581 ITGGSGEWDYLAEYTISV-SGGAYFTSSDV-GA-----QLQ--FPYTGADPDTGYEVSKELRCDIISVTSN----TAVVV 647 (823) T ss_pred ecCCCCcccccCceEEEe-cCcceECCccc-ee-----EEE--eCcCCCccccccceEEEEEEeeceeeCC----ceEEE Confidence 11 123488999999876 88887766554 23 333 3578889999999999999998877522 11111 Q ss_pred eeeeEEEEEEEEEeeccccEEEEeCCCCccccccccccccccccccccc--cc--ccccEEEEEEeecCceEEEEE--E- Q lcl|Aclame:pro 704 DIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGR--SN--IGTGQYRFPVVGNAQTNLVTI--E- 776 (801) Q Consensus 704 ~~~r~~i~~~~v~~~~tg~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~tg~~~vp~~~~~~~~~v~i--~- 776 (801) ... ++....++...+.. ..+....-.-+-...++.+.- +.+|. |+ ...|.+++|.. ...+.+-| + T Consensus 648 ~~~--r~v~a~l~~~~t~~--~~~~~~~~~gL~hleg~tv~v--~~dg~~~~~~~v~~G~vtl~~~--~~~v~vGl~~~~ 719 (823) T protein:vir:95 648 RAN--RNVPPSLRNVATTN--WQMARRTFGGLSHLEGQTVNI--LSDANVEPQKVVSGGAVTLESP--GAVVHIGLPITA 719 (823) T ss_pred ccC--Ccccceeeeeeccc--cccccceeeeccccccceEEE--EEcCeeeCCeEecCCEEEecCC--CCEEEEeeccee Confidence 111 12122222222211 111000000011222332211 11122 22 23566666543 33333332 1 Q ss_pred ECCcCCEEEEEEEEEEEEeccccCC Q lcl|Aclame:pro 777 SDASTPLNIIGCGWEGNYLRRSSGI 801 (801) Q Consensus 777 ~~~P~P~tvlsi~~eg~y~~r~rr~ 801 (801) --.|||..+. +.|..--|.||| T Consensus 720 ~~~~l~~~~~---~~g~~~g~~~ri 741 (823) T protein:vir:95 720 EFETLDININ---GQETLLDKKQVI 741 (823) T ss_pred eEEecchhcC---CCcccCCceeEE Confidence 2256776644 357777888888 No 38 >protein:vir:2109 Length: 472 # NCBI annotation: head completion protein # Family: family:all:1540 # MgeID: mge:46 # MgeName: P22 # Cross-refs: genbank:acc:NP_059633;genbank:gi:9635541;genbank:GeneID:1262840 Probab=44.71 E-value=0.8 Score=21.13 Aligned_cols=425 Identities=10% Similarity=0.035 Sum_probs=152.1 Q ss_pred HHhh---hhhcccceeeeeeccceEEEECCceEEEEeCCCceeEEEEeecCCCccce-eeeeeecccceeccce----e- Q lcl|Aclame:pro 198 LAAQ---LRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLI-NPVTHYTQSFQKLPIN----A- 268 (801) Q Consensus 198 l~~~---~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t~t~~dg~~~t~~-~~~~~~v~~~~~lp~~----~- 268 (801) |... +......... .+-.....+-..|-. .++++....+ +...+ .....++|.. + T Consensus 1 m~~~q~Pl~~g~~~~~~----~~d~~~~~pVN~~a~-----------~~~~~~s~~~lr~tPG-~~~~~~~~g~~RG~~~ 64 (472) T protein:vir:21 1 MPIQQLPMMKGMGKDFK----NADYIDYLPVNMLAT-----------PKEILNSSGYLRSFPG-ITKRYDMNGVSRGVEY 64 (472) T ss_pred CceEEeecccccccccc----ccceeeeeeeeeeee-----------ccCCcccceeeeecCC-cceeccCCCceeeeee Confidence 1110 0000000000 001111111111111 1111111111 11111 1111112211 1 Q ss_pred --eCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEEEEecCCeEEeeccCcCccccCCccccc Q lcl|Aclame:pro 269 --PDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNP 346 (801) Q Consensus 269 --~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~~s~p 346 (801) .+|....|.+. .=|.+..+. -+.++.|.+.--++.+.+...+....--|......++..+.-+|.. T Consensus 65 ~t~~~~ly~V~G~-----~LY~v~~~~-----G~i~gsgrVsMa~n~~~~~v~~~~~~~~Y~~~~~~~t~~~~~~d~~-- 132 (472) T protein:vir:21 65 NTAQNAVYRVCGG-----KLYKGESEV-----GDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPADSG-- 132 (472) T ss_pred cccCCeEEEEeCC-----ceEEEeeee-----eeecccccEEEeeCCeEEEEEECCceeEEEEecchhhhhcccCccc-- Confidence 12333333221 113332211 1123444433333333222211111101222111111111001111 Q ss_pred CccccCCCceEEEEEcCeeEEecC--CEEEEEecCCccccccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEe Q lcl|Aclame:pro 347 YPSFTGQTINDIFFFRNRLGFLSG--ENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWS 424 (801) Q Consensus 347 ~psf~g~~p~~v~f~q~RL~~~~~--~~v~~S~~gd~~nF~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t 424 (801) +|-+.-..+..|+|+.+|++|.-+ +..+.|..-|-+..+ +=++ ++-+..+++.|.-++...+.|++|. T Consensus 133 f~~~dl~~~~dv~f~dGyfV~~~~gt~~f~is~l~d~~~~~--------~y~~--FatAE~~pD~Iv~i~~~~~~l~lfG 202 (472) T protein:vir:21 133 FTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPD--------RYSA--QYRAESQPDGIIGIGTWRDFIVCFG 202 (472) T ss_pred cccccccceeEEEEecceEEEccCCcceeEEecCCCCcccc--------CCcc--ceeeccCCCceEEEEeeccEEEEEe Confidence 111111345579999999998863 334445444432211 1112 5667788888888999999999998 Q ss_pred cCcE--EEEeCCccccccceEEEEEe----eeccccCCCcEEeCCeEEEEEcCCCeE-EEEEEeeecccccceehhhHHH Q lcl|Aclame:pro 425 DQAQ--FVLTASGILSSRSVELNLTT----QFDVQDRARPHGVGRNVYFASPRASFT-SINRYYAVQDVSSVKNAEDMTA 497 (801) Q Consensus 425 ~~~q--~~~~~~~~lTP~~~~i~~~s----~~~~~~~~~Pv~vg~~v~fv~~~g~~~-~v~~~~~~~~~~~~~~~~dls~ 497 (801) +..- |..+|+. ++..+-..+++ ..+|++.=.=..+|++++|+...+..- .|+. .++|+++-||- T Consensus 203 ~~TiEvw~ntG~a--d~~~fpy~r~~g~~iq~Gcaa~~sv~~~~~s~~~l~~~~~g~~~V~~-------~~g~qa~rIST 273 (472) T protein:vir:21 203 SSTIEYFSLTGAT--TAGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYI-------IGSGQASPIAT 273 (472) T ss_pred ccceEEEEecCCC--CcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCCcccEEEE-------ccCceeEEecC Confidence 8776 7777652 22233344433 357887767789999999999987421 1222 24566666643 Q ss_pred H-HHHhcCCC----cEE--EEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecCCC---eEEEEEE----- Q lcl|Aclame:pro 498 H-VPNYIPNG----VFS--ISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDN---VTVFAAQ----- 562 (801) Q Consensus 498 ~-~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~g~---~~~~~~~----- 562 (801) | +.+.|... ..+ +.+++.+...++.-..-+. -+||.- -.+.... -||.-+.++. .+..++. T Consensus 274 ~aIE~~i~~y~~~e~~~A~~~t~~~eGH~fy~LtfP~~-Tw~yD~-at~~~~e--~W~~~~sg~~~~~~R~~~~~~~~g~ 349 (472) T protein:vir:21 274 ASIEKIIRSYTAEEMATGVMETLRFDSHELLIIHLPRH-VLVYDA-SSSQNGP--QWCVLKTGLYDDVYRGVDFMYEGNQ 349 (472) T ss_pred HHHHHHHHhcCCccccceEEEEEEeCCeEEEEEEcCCe-eEEEEc-ccCccCc--eeeeeccCCCcCceeEEEEEeeCCe Confidence 3 34444332 111 3344455554433333333 334331 1112222 2777666432 3333322 Q ss_pred -----EcCCEEEEEEEeC---CCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccc Q lcl|Aclame:pro 563 -----VINSTMTVLMGNE---HAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFT 634 (801) Q Consensus 563 -----~~~d~l~~vv~r~---~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l 634 (801) ..+..||.+--.. .+-..+++....- -.....-++|..... ..++.... .. T Consensus 350 ~ivGD~~nG~ly~L~fd~~~~~d~~~~~~r~~p~----~~~dn~R~fd~eve~--~~Gv~q~~-d~-------------- 408 (472) T protein:vir:21 350 ITCGDKSEAVVGQLQFDISSQYDKQQEHLLFTPL----FKADNARCFDLEVES--STGVAQYA-DR-------------- 408 (472) T ss_pred EEEEEcCCCeEEEEEecccccCCCcCcEEEEccc----eeCCCCEEEEEeeec--cCCCCCcC-cE-------------- Confidence 2244556552111 1111122211110 000111122322111 11110000 01 Q ss_pred cceEEEEecCCccccceeeccccccCcE---EEEc-CcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEE Q lcl|Aclame:pro 635 KGRVSVVFPDGKIIEVDQPINGWSSDPV---LRLD-GNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQL 710 (801) Q Consensus 635 ~g~~v~~~~dG~~~~~~~~~~g~~~~~~---~~i~-~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i 710 (801) ....+-.||..........-...+.. +... ..+.-.. ||+++ ++.. ..++.| T Consensus 409 --v~L~wSddG~~~~~~~~~~~g~~g~~~tr~~~~RlG~~r~~--v~f~~--r~~~------------------~~~~~l 464 (472) T protein:vir:21 409 --LFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRRL--IGFKL--RVIT------------------KSPVTL 464 (472) T ss_pred --EEEEeeccccccccceeeccCCccchhcceeeeeeeecccc--eeEEE--EEEe------------------cCccee Confidence 12222233332211111110000000 0000 0000011 23322 2111 122345 Q ss_pred EEEEEEee Q lcl|Aclame:pro 711 RRAWVNYE 718 (801) Q Consensus 711 ~~~~v~~~ 718 (801) ..+++++. T Consensus 465 ~g~~~~~E 472 (472) T protein:vir:21 465 SGCQIRLE 472 (472) T ss_pred eeeEEeeC Confidence 55555555 No 39 >protein:vir:93631 Length: 580 # NCBI annotation: Bcep22gp67 # Family: family:all:1544 # MgeID: mge:1470 # MgeName: Bcep22 # Cross-refs: genbank:acc:NP_944296;genbank:gi:38640373;genbank:GeneID:2658280 Probab=42.91 E-value=0.87 Score=20.93 Aligned_cols=507 Identities=12% Similarity=0.126 Sum_probs=157.4 Q ss_pred EEEEeCCCeEEEEecCCcccccCCCccceeEEEEcCEEEEecCceeeeEee----cccccCCCCCCccEEEEecCCCccc Q lcl|Aclame:pro 86 IKVFDLDGKEYQVRGDRSYVRTANPREDLRMITVADYTFVTNRKVVVQSND----QSVNLPGFKDQGDALINVRGGQYGR 161 (801) Q Consensus 86 ~rv~~~~g~~~~v~~~~~y~~t~~~~~~l~~~q~~d~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~~g~y~~ 161 (801) |-+.+..+ ..|..|-+. .--+. -..+|.+--+-+-+....|.+.. .....+. . ....+ +- .. T Consensus 1 M~~i~i~~----f~Ge~Prl~-p~lLP-~~~a~~a~n~~~~~G~i~P~~~~~~~~~~~~i~~-~-~~~t~-~~-----~~ 66 (580) T protein:vir:93 1 MTIIKITG----FSGEIPRLV-PRLLP-DTAAQNATNARLESGGLTPYRKPKFITRISTIPA-G-QIETI-YR-----NG 66 (580) T ss_pred CeeEeecc----cccccccch-hhhcc-ccccceEEeeeccCCeeeeeeCchhhccccccCc-C-cceEE-Ee-----cC Confidence 33333211 011111000 00000 01223333333334444443221 1111000 0 00000 00 01 Q ss_pred eEEEEeCCceeEeeeeecccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEE--EEeCCCceeEE Q lcl|Aclame:pro 162 RLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIH--ILAPNNDNVWG 239 (801) Q Consensus 162 ~y~vti~~~~ta~~~tp~~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~t 239 (801) .|-+.-.+..-+ .++.-....+...+.. .-+ ++..+.... +.+++.+ .+ T Consensus 67 ~~W~~w~~~V~~---i~~PvA~DRvy~Td~g--~Pk----------------------vt~~g~sy~lgVpaPs~A--pt 117 (580) T protein:vir:93 67 ETWMAWDKPVYA---APGPVAADRLYVMGDG--APK----------------------MIVGGTTYPLAVPMPSAA--LT 117 (580) T ss_pred ceeEEeCCceee---ecCccccceeEEcCCc--ccc----------------------eecCCccccccCCCcccC--ce Confidence 122222211100 0000000000000000 000 000000000 0111110 01 Q ss_pred EEeecCCC---ccceeeeeeecccceecc--------ceeeCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceee Q lcl|Aclame:pro 240 LQTKDGYA---DQLINPVTHYTQSFQKLP--------INAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRT 308 (801) Q Consensus 240 ~t~~dg~~---~t~~~~~~~~v~~~~~lp--------~~~~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~ 308 (801) +...+++. +++...++ -|+...+.. -..+.|..|.+++........-+-+ ....+-..+.+ T Consensus 118 ~~~~g~g~l~~~~y~Yv~T-fVt~~GeES~PS~~S~~vtv~~g~tVtLs~~p~p~~~~~i~~----~RIYRS~tG~~--- 189 (580) T protein:vir:93 118 AATSGTGTGDVFSRVYVYT-FVTGFGEESEPSAISNEVNWQAGQTVTLSGFQAAPAGRNITK----QRIYRSQTSLS--- 189 (580) T ss_pred eeecCCCCcCccceEEEEE-EEcCCCCcCCCcccccceeeCCCCeEEEEecCCCCCCCccce----EEEEEeccCCC--- Confidence 11100000 01111110 111111100 0012233344433322221110000 00001000000 Q ss_pred EEecCcceEEEEEe---cCCeEEeeccCcCccccCCcccccCcccc-CCC----ceEEEEEcCeeEEecCCEEEEEecCC Q lcl|Aclame:pro 309 HLYYHTMPWALVRA---SDGNFDFKVLEWGARTVGDDTTNPYPSFT-GQT----INDIFFFRNRLGFLSGENIILSRTSK 380 (801) Q Consensus 309 ~~~~~t~p~~lv~~---~~~t~~~~~~~w~~~~~gd~~s~p~psf~-g~~----p~~v~f~q~RL~~~~~~~v~~S~~gd 380 (801) ++. ..++.+ ...+|. +...-.....+.|++. +.. -.-+.|..+++.=..++.||+|+.=- T Consensus 190 ----gtd-y~lVAel~Ag~~sF~-------Dd~s~a~Lge~Lps~~~~~PP~~m~gL~~m~nGi~agF~Gnev~fsEpy~ 257 (580) T protein:vir:93 190 ----GTD-LYFIAERDASAANFV-------DNVPLSDQNEPLPSLEWNAPPDDLTGLISLPNGMMAAFRGKELWLCEPWR 257 (580) T ss_pred ----cee-EEEEeeeccceeeee-------ecccccccccccchhhccCcCCCcceEEeeccceEEEEeCCEEEEecCCC Confidence 000 011111 111222 1111111222223221 111 12346777766555699999999965 Q ss_pred ccccccccCCCCCCCccEEEEEcCCcceEEEEEeecCCcEEEEecCcEEEEeCCc--cccccceEEEEEeeeccccCCCc Q lcl|Aclame:pro 381 YFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASG--ILSSRSVELNLTTQFDVQDRARP 458 (801) Q Consensus 381 ~~nF~~~t~~~~~d~d~i~~~~~~~~~~~i~~~~~~~~~L~~~t~~~q~~~~~~~--~lTP~~~~i~~~s~~~~~~~~~P 458 (801) .+-| +..=....|. .|--+.+++..|+++|.+.-|+++|.. .|+.....+ . --|-++=.. T Consensus 258 P~AW-P~~yr~t~~~-------------~Ivaia~~g~~LvV~T~g~pyl~~G~~P~~ms~~kL~~--~--q~CvS~rsi 319 (580) T protein:vir:93 258 PHAW-PQKYVLTMDY-------------NIVALGAYGTTIVVATDGQPYIVSGASPDAMSQEKLEL--N--LPCINARGL 319 (580) T ss_pred Cccc-hhhcCCCCCC-------------CceeEeeeCceEEEEEcCceEEEEccChhhcccccccc--c--cccccccce Confidence 5554 2211110122 233455677899999999999999864 355433322 2 258888888 Q ss_pred EEeCCeEEEEEcCCCeEEEEEEeeecccccceehhhHHHHHHHhcCCCcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEec Q lcl|Aclame:pro 459 HGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYI 538 (801) Q Consensus 459 v~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~ 538 (801) |.+|..++|.+..| +-++ + . ++ +.-+|. .||.- +-|-.-+|.+++-|-- +..-+..|+.... T Consensus 320 V~~~~~v~Yas~dG-----Lv~i--~-~-~g--a~vvT~---~l~t~---~qW~~~~P~ti~a~~~-eG~Y~a~Y~~~~~ 381 (580) T protein:vir:93 320 VDLGYAIAYPSHDG-----LVVA--S-S-SG--ARVVTD---QLMTR---NDWLKTAPGRFVSGQF-FGRYLASYEYIDP 381 (580) T ss_pred eecCceEEeecCCc-----EEEE--e-C-Ch--HHHHHh---hccCh---hHHHhcCCceEEEEee-cCeEEEEEccccc Confidence 99999999999998 2221 1 1 11 333332 12211 1121223333332211 1112222221100 Q ss_pred -----------C-CceeEEeEEeeecCCCeEEEEEEEcCCEEEEEEEeCCCEE----EEEEEEeecCCCCC---cCcc-e Q lcl|Aclame:pro 539 -----------D-EEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMGNEHAVW----MGRLHFTKNSIDIP---GEPY-R 598 (801) Q Consensus 539 -----------~-~e~~v~aW~~w~~~g~~~~~~~~~~~d~l~~vv~r~~~~~----~~r~~~~~~~~~~~---~~~~-~ 598 (801) + .-++ ..|.+-++. +.+...+...|.||++-.+.+--+ ......++.+..+. ...+ + T Consensus 382 ~~~~~~g~fi~d~~~~~-~~~~~~~~~--~d~~~~d~~~d~Ly~~~~~~i~~~~~~~~~~~~~~WrSK~f~~~~~~sf~~ 458 (580) T protein:vir:93 382 AGTARRGSFIIDLTGQE-AFLHRTNYK--ADATFYDITEGKLYLCIGQDIYEWDALDSENEILVWRSKQYVVQKPTNFGV 458 (580) T ss_pred ccccccceEEEecCCCc-ceeEEeccc--cceeeeeccCCeEEEEeCCEEEEEcCCCCCcceEEEecceEEecCCcCceE Confidence 0 1111 136555442 232223345788998875432211 01111222221110 0011 1 Q ss_pred eeeeeeeEE-----ee--------------------ccccccccc-cceeeccccccCcccccceEEEEecCCcccccee Q lcl|Aclame:pro 599 LYIDAKRKY-----TI--------------------PAGTYNDDT-YQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQ 652 (801) Q Consensus 599 ~~lD~~~~~-----~~--------------------~~~t~~~~~-~~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~ 652 (801) +.+++.... .. .....++.+ +.-++.-+...-+....-..+.+++||....... T Consensus 459 ~rV~s~~~~~~~~~~a~~~~~~~~~a~n~~~~~~~~~~~~~~~~~v~~~~i~gd~~~~~~~~~~~~~~~~adG~~~~t~~ 538 (580) T protein:vir:93 459 ILIEGSVLMTPEEEAAEQAAIDAAKAHNDSIFGDASIGGELNGAALNVYPIDGDALVRIESSRFVAATVYADGKAVATVS 538 (580) T ss_pred EEEeeccccchhhhhhhhhhhhhhhhhhhhcccccccccccccccceeeeeccccccccccccceEEEEeeCCeEEEEEe Confidence 112211000 00 000000000 0000000001111112245567778887664433 Q ss_pred eccccccCcEEEEcCcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEeeccccEEEEeCCC Q lcl|Aclame:pro 653 PINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNL 730 (801) Q Consensus 653 ~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~~tg~~~~~v~~~ 730 (801) ..+ .-+++|+...+.++.|=+.=.. +|.++.+.=.-. ++ +.. T Consensus 539 ~~~-----~~~RLPag~~a~~Wev~vsg~~--------------------------~V~~v~la~s~~-EL----~~~ 580 (580) T protein:vir:93 539 KLN-----RMCRLPSGFLAQTWEVEVSANA--------------------------DIAQVTLAGTGA-EL----AGV 580 (580) T ss_pred cCC-----ceEEccCCccccEEEEEEEecc--------------------------ceeEEEEecChH-HH----hcC Confidence 222 3456665545555544221111 233333221100 00 000 No 40 >protein:vir:3529 Length: 477 # NCBI annotation: P28 # Family: family:all:1540 # MgeID: mge:72 # MgeName: APSE-1 # Cross-refs: genbank:acc:NP_050989;genbank:gi:9633575;genbank:GeneID:1262322 Probab=29.48 E-value=1.7 Score=19.38 Aligned_cols=428 Identities=12% Similarity=0.053 Sum_probs=155.6 Q ss_pred eeeeeeccceEEEECCc--eEEEEeCCCceeEEEEeecCCCccceeeeee-ecccceeccceeeCCeEEEeeccC---C- Q lcl|Aclame:pro 209 PNNDQDPNKWRFNVGPG--FIHILAPNNDNVWGLQTKDGYADQLINPVTH-YTQSFQKLPINAPDGYIVKIVGDT---S- 281 (801) Q Consensus 209 ~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~t~t~~dg~~~t~~~~~~~-~v~~~~~lp~~~~~g~~v~i~~~~---~- 281 (801) ... ..-..+...+- ..+-....++.+..+- -.+.+... ...+...|+. ..|...+..+.. + T Consensus 1 ~~~---~~~m~~~~ipl~~g~~~~~~~~d~~~~~P-------VN~~a~p~~~~~s~~~L~~--~pG~~~~~~~~G~~RG~ 68 (477) T protein:vir:35 1 MLS---EVFMPKIQIPLAKGLVKDIKTADYIDALP-------VNMLATPKEVLNASGYLRS--FPGIEKKQDAKGVSRGV 68 (477) T ss_pred Ccc---cceeeeeccccccccccccccccceeeee-------eccceeecccccccccccc--CCcceeeccCCccccce Confidence 000 00001111110 0000001111000000 00000000 0011111111 011111111000 0 Q ss_pred ---CccceeEEEEccCceeEE------EeeccceeeEEecCcceEEEEEecCCeEEeeccCcCccccCCcccccCccccC Q lcl|Aclame:pro 282 ---KTADQYYVRFDLNRKVWV------ETIGWNTRTHLYYHTMPWALVRASDGNFDFKVLEWGARTVGDDTTNPYPSFTG 352 (801) Q Consensus 282 ---~~~~~yyv~~~~~~~~W~------e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~~~~w~~~~~gd~~s~p~psf~g 352 (801) ......|+ ..++..|+ +.++.|.+.--++.+.......-+..-|....-.++.+ ....+..|+|.. T Consensus 69 ~~~~~~g~lY~--V~G~~LY~v~~~vG~I~gsg~VsMa~n~~~~aIv~~g~~~gy~y~~t~~~~~---~~~~~~~p~~~l 143 (477) T protein:vir:35 69 HFNTKNNALYR--VCGNTLYRNDKEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKALS---NWPKDKYPQYDL 143 (477) T ss_pred eEeecCCeEEE--EecCeeEeeeeeeeeecccccEEEeeCCcEEEEEECCcceeEEEecccceee---ecCccccCCccc Confidence 00011111 11111222 12233333222232222111111111122222122221 122334778878 Q ss_pred CCceEEEEEcCeeEEec--CCEEEEEecCCccccccccCCCCCCCccEE-EEEcCCcceEEEEEeecCCcEEEEecCcE- Q lcl|Aclame:pro 353 QTINDIFFFRNRLGFLS--GENIILSRTSKYFNFFPASVSNYSDDDPID-VAVSHNRVSTLKYAVPFSEELLLWSDQAQ- 428 (801) Q Consensus 353 ~~p~~v~f~q~RL~~~~--~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~-~~~~~~~~~~i~~~~~~~~~L~~~t~~~q- 428 (801) ..+..|+|..+|++|.- .+.+..|..-|-. --|+++ ++.+..+++.|.-++...+.|++|.+..- T Consensus 144 ~~~~~v~f~dGyfV~~~~gt~~~~iS~L~d~s-----------~~d~~~~FasAE~~pD~Ivgi~~~~~~i~lfG~~TiE 212 (477) T protein:vir:35 144 GEVIDVCRNRGRYIWLQKGGERFGVTDLEDES-----------KPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIE 212 (477) T ss_pred cceeEEEeeCceEEEeecCCCeEEEeecCCcc-----------ccccccccccccCCCCceEEEEeeccEEEEEeccceE Confidence 88889999999998875 3445556433322 135565 66678888889989999999999988776 Q ss_pred -EEEeCCcccc-c-cceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeE-EEEEEeeecccccceehhhHHHH-HHHhc Q lcl|Aclame:pro 429 -FVLTASGILS-S-RSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFT-SINRYYAVQDVSSVKNAEDMTAH-VPNYI 503 (801) Q Consensus 429 -~~~~~~~~lT-P-~~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~-~v~~~~~~~~~~~~~~~~dls~~-~~~~~ 503 (801) |..+|+..++ | ....-..+-..+|++.=.=..+|++++|+......- .|+. .++|+++-||-| +.+.| T Consensus 213 vw~ntG~a~f~~p~~r~~~~~mIq~Gcaa~~sv~~~~~t~~~l~~d~~g~~~V~~-------~~g~q~~rIST~aIE~~i 285 (477) T protein:vir:35 213 YFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVYL-------IGAGEKNKISTATIDKII 285 (477) T ss_pred EEEecCCCCCCcceeecCCceeeeecccCchhhhhhCceEEEEecCCCcccEEEE-------ccCceeEEecCHHHHHHH Confidence 7878765444 2 111101111357887767789999999999874311 2322 245566666433 34444 Q ss_pred CC------CcEEEEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecC---CCeEEEEE----------EEc Q lcl|Aclame:pro 504 PN------GVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFG---DNVTVFAA----------QVI 564 (801) Q Consensus 504 ~~------~~~~~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~---g~~~~~~~----------~~~ 564 (801) .. ....+.+++.+...++.-..-+.+ +||.- .-++..-.|+--... ...+..|+ +.. T Consensus 286 ~ay~~~e~a~af~~t~~~eGH~fy~LtfP~~T-w~yD~---at~~w~e~W~~~~~g~~~~~~Ra~~~~~~~g~~~vGD~~ 361 (477) T protein:vir:35 286 RYYSADELAASFMESIRFDNHELLLLHLPKHT-LCFDG---SASHQYSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKK 361 (477) T ss_pred HhcCCcchhceeEEEEEeCCeeEEEEEcCCce-EEEec---ccccccceeeeeccCCccCceEEEEEEEeCCeEEEEEcC Confidence 33 111234555555544333333332 23321 111111124332222 23332232 222 Q ss_pred CCEEEEEE---EeCCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccccceEEEE Q lcl|Aclame:pro 565 NSTMTVLM---GNEHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFTKGRVSVV 641 (801) Q Consensus 565 ~d~l~~vv---~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~~ 641 (801) +..||.+. .+..+-.++++.+..- ......++ +|-.+.....-++... + ..... T Consensus 362 ng~l~~ld~~~~~d~g~~i~~~~~~p~---~~~d~~Rv-~~~el~~~tGvgq~~d-~------------------v~L~~ 418 (477) T protein:vir:35 362 EGVLGHLIFNASNQYEQQTEHLLYTPM---IKADNARL-FDFELEASTGVAQIAD-K------------------LFLSV 418 (477) T ss_pred CCeEEEECCCCcccCCCccceEEecce---eeCCCCeE-EEEEEEEecCcCccCc-e------------------EEEEE Confidence 45666654 3333334444432110 00111122 2322222111111100 0 12222 Q ss_pred ecCCccccceeeccccccCcEEE-EcCcccC-ceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEEEEEEEEEee Q lcl|Aclame:pro 642 FPDGKIIEVDQPINGWSSDPVLR-LDGNQEG-QVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYE 718 (801) Q Consensus 642 ~~dG~~~~~~~~~~g~~~~~~~~-i~~~~~~-~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~ 718 (801) -.||..........-...+...+ +.=.+-+ .+=-||+.| ++..+-|..+ +-+..++. T Consensus 419 sddG~~~~~~~~~~~g~~g~~~~r~~~~RlG~~r~~vgf~~--r~~~~~pv~l------------------~~~~~~~e 477 (477) T protein:vir:35 419 TTDGINYSREQLIEQNSPFQYDKRILWRRIGRVRKNIGFKI--RIITKSPVTL------------------SDLSIRME 477 (477) T ss_pred eccccccccceeecCCCccccccceeeeeeeeceeccceEE--EEEecCCcee------------------ccceeEeC Confidence 23333222111111000011000 0000000 001234433 4444434332 11111111 No 41 >protein:vir:105525 Length: 472 # NCBI annotation: phage DNA stabilization protein # Family: family:all:1540 # MgeID: mge:1463 # MgeName: phiSG1 # Cross-refs: genbank:acc:YP_516194;genbank:gi:89885997;genbank:GeneID:3964385 Probab=27.15 E-value=1.9 Score=19.09 Aligned_cols=424 Identities=10% Similarity=0.021 Sum_probs=162.9 Q ss_pred HHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCce-eEEEEeecCCCccceeeeeeecccceeccce-------ee Q lcl|Aclame:pro 198 LAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDN-VWGLQTKDGYADQLINPVTHYTQSFQKLPIN-------AP 269 (801) Q Consensus 198 l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~t~t~~dg~~~t~~~~~~~~v~~~~~lp~~-------~~ 269 (801) |............. ...+......-+-..|-+.....+ ....- ...+ ...+.+++.. .. T Consensus 1 m~~~q~pl~~g~~~-~~~~~~~~~~lpvN~y~~p~~~~~ss~~lr-----------~~PG-~~~~~~~~g~~RG~~~~~~ 67 (472) T protein:vir:10 1 MAIMQLPLLRGLGK-ARDDADYIDALPVNMLATPKPVLNASGYLR-----------SFPG-ITHKAEVAGVSRGVQYNTH 67 (472) T ss_pred CCceeeeccccccc-CccccCceeeeeeeeeeccccccccceeec-----------ccCC-ceeecCCCcccceeEeeee Confidence 11110000000000 000001111111111111111111 00000 0000 1111222111 11 Q ss_pred CCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEEEEecCCeEEee-----ccCcCccccCCccc Q lcl|Aclame:pro 270 DGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALVRASDGNFDFK-----VLEWGARTVGDDTT 344 (801) Q Consensus 270 ~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv~~~~~t~~~~-----~~~w~~~~~gd~~s 344 (801) +|....|.+.. =|.+ .-.|-+.++.|.+.--+..+.+..+++....-|... ..+|... .- T Consensus 68 ~~~lY~V~G~~-----Ly~v-----~~~vG~iagsg~VsMa~~~~~q~v~v~g~~~~y~y~g~~~t~~~~~~~-----~~ 132 (472) T protein:vir:10 68 EKTVYRGLGNQ-----LYKG-----HKPIADLAGKGRISMAFSRNSQAVVAAGKMTLYRYDGTVKTLENWPKE-----KK 132 (472) T ss_pred CCeEEEEecce-----EEEE-----EeeeeeecccccEEEEecCCceEEEEecceeEEEeccchhhhhhcccc-----cc Confidence 33333333321 1222 123555556665554444444444443321112211 1122211 11 Q ss_pred ccCccccCCCceEEEEEcCeeEEecC--CEEEEEecCCccccccccCCCCCCCccEE-EEEcCCcceEEEEEeecCCcEE Q lcl|Aclame:pro 345 NPYPSFTGQTINDIFFFRNRLGFLSG--ENIILSRTSKYFNFFPASVSNYSDDDPID-VAVSHNRVSTLKYAVPFSEELL 421 (801) Q Consensus 345 ~p~psf~g~~p~~v~f~q~RL~~~~~--~~v~~S~~gd~~nF~~~t~~~~~d~d~i~-~~~~~~~~~~i~~~~~~~~~L~ 421 (801) ...+.| ..+..|.|..+|++|.-| +.++.|...|-.- .|+++ ++.+..+++.|.-++...+.|+ T Consensus 133 it~~dl--~~~~~v~~~dGyfV~~~~gt~~~~iS~L~d~s~-----------~~~~~~FatAE~~pD~Ivgi~~~~~~i~ 199 (472) T protein:vir:10 133 YTQYDI--GNVRDMCHLRGRYVWCKDGSDIFGVTDLEDESH-----------PDRYRALYRAESQPDGIIGIDSWRDFIV 199 (472) T ss_pred CCcccc--CCceeEEEeCceEEEeecCCceEEEeecCCccc-----------CCcccceeeecCCCCceEEEEeeccEEE Confidence 122223 367889999999998863 3444676554321 23454 5677888888988999999999 Q ss_pred EEecCcE--EEEeCCcccccc----ceEEEEEeeeccccCCCcEEeCCeEEEEEcCCCeEEEEEEeeecccccceehhhH Q lcl|Aclame:pro 422 LWSDQAQ--FVLTASGILSSR----SVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDM 495 (801) Q Consensus 422 ~~t~~~q--~~~~~~~~lTP~----~~~i~~~s~~~~~~~~~Pv~vg~~v~fv~~~g~~~~v~~~~~~~~~~~~~~~~dl 495 (801) +|.+..- |..+|+..++=. ....-.+ .+|++.=.=..+|++++|+......-.+..+ .++|+++-+ T Consensus 200 lfG~~TiEvw~ntG~a~fpf~r~~~~pg~~iq--~Gcaa~~sv~~~~~s~~~l~~d~~g~~~V~~------~~g~q~~rI 271 (472) T protein:vir:10 200 CFGASTIEYFSLTGAADGQSAIYAAQPALMVE--KGIAGTHCKTRLGDAHVIISHQATGAPSVFL------INQAQATSI 271 (472) T ss_pred EEeccceEEEEecCCCCcceeeeccCccceee--ecccCchhhhhhCceEEEEecCCCcceEEEE------ccCceEEEe Confidence 9988776 777776322211 1122233 4788776678999999999987532222221 245566666 Q ss_pred HH-HHHHhcCCC----cEE--EEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEEeEEeeecC-CCeEEEEE------ Q lcl|Aclame:pro 496 TA-HVPNYIPNG----VFS--ISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFG-DNVTVFAA------ 561 (801) Q Consensus 496 s~-~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~aW~~w~~~-g~~~~~~~------ 561 (801) |- -+.+.|..- +.+ +.+++.+...++.-..-+. -+||. +-.+.++.++.|.+-.+. ...+..|+ T Consensus 272 ST~aIE~~i~~y~~~e~~dA~~~s~~~eGH~fy~LtfP~~-Tw~yD-~at~~~~~~w~~~~~g~~~~~~Ra~~~~~~~g~ 349 (472) T protein:vir:10 272 ATATIEKILRSYTHDELASAVMETVRFDSHELVLIHLSRQ-VLCYD-AAANQNGLQWSLLKTGFYHAPYRGIDFMFADHH 349 (472) T ss_pred cCHHHHHHHHhCCcccccceeEEEEEeCCeEEEEEEcCCe-eEEEe-ccCCccceeeeeeecCCccCceEEEEEEEeCCe Confidence 43 334444432 222 3455555664443333443 33433 122233444333333322 23333332 Q ss_pred ----EEcCCEEEEEEEe---CCCEEEEEEEEeecCCCCCcCcceeeeeeeeEEeeccccccccccceeeccccccCcccc Q lcl|Aclame:pro 562 ----QVINSTMTVLMGN---EHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLATIYGMNFT 634 (801) Q Consensus 562 ----~~~~d~l~~vv~r---~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~t~~~~~~~~~~~~~~~~gl~~l 634 (801) +..+..||.+.-. ..+-.++++....--.+ ...+ ..|..+.. ..|.... T Consensus 350 ~~vGD~~ng~l~~ld~~~~td~g~pi~~~~~tp~~~~---~n~R-vfd~el~~--------------------~tGvg~~ 405 (472) T protein:vir:10 350 LTCGDKNDSLLGQLDFASSAQYEKPQEHVLYTPLFKA---DNAR-VFDFELEA--------------------STGVAHI 405 (472) T ss_pred EEEEEcCCCeEEEEcCcCcCCCCceeEEEeeccceec---CCCe-EEEEEEEe--------------------eCCcCcc Confidence 2224455554221 22233444332211110 0011 12321111 1122222 Q ss_pred cce-EEEEecCCccccc-eee-cccccc-CcEEEEc-CcccCceEEEEEeeeEEEEeCCeeEEecCCCCceeeeeeeeEE Q lcl|Aclame:pro 635 KGR-VSVVFPDGKIIEV-DQP-INGWSS-DPVLRLD-GNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQ 709 (801) Q Consensus 635 ~g~-~v~~~~dG~~~~~-~~~-~~g~~~-~~~~~i~-~~~~~~~v~vGl~y~~~~~~~~~~~~~~~~~g~~~~~~~~r~~ 709 (801) .++ ....-.||...-. ..+ ..|... ..++... ... + +=-||+.| ++...-|..+. .. T Consensus 406 ~~~v~L~wSddg~~~~~~~~~~~~g~~~~~~r~~w~RlG~-a-r~~vgf~~--rv~~s~pv~~~---------~~----- 467 (472) T protein:vir:10 406 ADRLFLSATADGLHFGREQMINQNAPFAYDRRILWRRMGR-V-RKNLGFKV--RVITSSPVTLS---------GC----- 467 (472) T ss_pred CceEEEEEeccccccchhHHHhhcCccchhheeeeheeec-c-ccccceEE--EEEEecccccc---------cc----- Confidence 221 2222334322211 111 011000 0000000 000 0 01135444 55555554431 11 Q ss_pred EEEEEEE Q lcl|Aclame:pro 710 LRRAWVN 716 (801) Q Consensus 710 i~~~~v~ 716 (801) .+.|. T Consensus 468 --~a~~e 472 (472) T protein:vir:10 468 --QIRME 472 (472) T ss_pred --eeeeC Confidence 11111 No 42 >protein:vir:9268 Length: 472 # NCBI annotation: 10 # Family: family:all:1540 # MgeID: mge:164 # MgeName: ST64T # Cross-refs: genbank:acc:NP_720332;genbank:gi:24371590;genbank:GeneID:955815 Probab=23.81 E-value=2.3 Score=18.65 Aligned_cols=426 Identities=12% Similarity=0.053 Sum_probs=151.3 Q ss_pred eEeeeeec--ccccccceeechHHHHHHHHhhhhhcccceeeeeeccceEEEECCceEEEEeCCCceeEEEEeecCCCcc Q lcl|Aclame:pro 172 RAAVQLPD--GSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQ 249 (801) Q Consensus 172 ta~~~tp~--~s~~~~~~~~~~~~ia~~l~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t~t~~dg~~~t 249 (801) -+.-..|- +... +..+...+ +++ .++..+. ...++.+...+ T Consensus 1 m~~~~ipl~~g~~~---~~~~a~~~-~~~--------------------pvn~y~~----~~~~~~ss~~L--------- 43 (472) T protein:vir:92 1 MPIQQLPMMKGMGK---DFKNADYI-DYL--------------------PINMLAT----PKEVLDSSGYL--------- 43 (472) T ss_pred Cceeeccccccccc---cCccCcce-eee--------------------ecccccc----cccccccccce--------- Confidence 00000110 0000 00000000 000 0000000 00000000000 Q ss_pred ceeeeeeecccceecccee-------eCCeEEEeeccCCCccceeEEEEccCceeEEEeeccceeeEEecCcceEEEEEe Q lcl|Aclame:pro 250 LINPVTHYTQSFQKLPINA-------PDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALVRA 322 (801) Q Consensus 250 ~~~~~~~~v~~~~~lp~~~-------~~g~~v~i~~~~~~~~~~yyv~~~~~~~~W~e~~~~~~~~~~~~~t~p~~lv~~ 322 (801) +...+- ..+.+++..+ .+|....|.+.. =|.+... --+.++.|.+.--++.+.+....+. T Consensus 44 --r~~pG~-~~~a~~~G~~RG~~~~~~~~~ly~V~G~~-----Ly~v~~~-----iG~i~gsgrVsMa~n~~~~av~~~~ 110 (472) T protein:vir:92 44 --RSFPGI-AKRNDVNGVSRGVEYNTAQNAVYRVCGGK-----LYKGEAV-----VGDVAGSGRVSMAHGRTSQAVGVNG 110 (472) T ss_pred --eecccc-eeecCCCCcccceeeeeeCCeEEEEeCcc-----eEEEEee-----EeeccCcccEEEecCCeEEEEEECC Confidence 000000 0001111110 122223332211 1222111 0112233333322333222221111 Q ss_pred cCCeEEeeccCcCccccCCcccccCccccCCCceEEEEEcCeeEEec--CCEEEEEecCCccccccccCCCCCCCccEE- Q lcl|Aclame:pro 323 SDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS--GENIILSRTSKYFNFFPASVSNYSDDDPID- 399 (801) Q Consensus 323 ~~~t~~~~~~~w~~~~~gd~~s~p~psf~g~~p~~v~f~q~RL~~~~--~~~v~~S~~gd~~nF~~~t~~~~~d~d~i~- 399 (801) ..--|......++..+.-+|.. +|-+.-..+..|+|+.+|++|.- ++.++.|...|-+.. |..+ T Consensus 111 ~~~~Y~~~~~~~t~~~~~~d~~--f~~~dl~~~~dv~f~dGyfV~~~~gt~~~~iS~l~d~~~~-----------~~y~~ 177 (472) T protein:vir:92 111 QLIEYRYDGAVKTVSNWPADSG--FTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHP-----------DRYSA 177 (472) T ss_pred ceeEEEEecchhhhhcccCccc--cccccccceeEEEEecceEEEccCCCceEEEeccCCcccc-----------ccccc Confidence 1001221111111100001111 11111134568999999999985 445666666653322 1111 Q ss_pred EEEcCCcceEEEEEeecCCcEEEEecCcE--EEEeCCccccccceEEEEEe----eeccccCCCcEEeCCeEEEEEcCCC Q lcl|Aclame:pro 400 VAVSHNRVSTLKYAVPFSEELLLWSDQAQ--FVLTASGILSSRSVELNLTT----QFDVQDRARPHGVGRNVYFASPRAS 473 (801) Q Consensus 400 ~~~~~~~~~~i~~~~~~~~~L~~~t~~~q--~~~~~~~~lTP~~~~i~~~s----~~~~~~~~~Pv~vg~~v~fv~~~g~ 473 (801) ++.+..+++.|.-++...+.|++|.+..- |..+|+. ++..+-..+++ ..+|++.=.=..+|++++|+...+. T Consensus 178 fa~AE~~pD~Ivgi~~~~~~l~lfG~~TiEvw~ntG~a--d~~~fpy~r~~g~~i~~Gcaa~~sv~~~~~s~~~l~~~~~ 255 (472) T protein:vir:92 178 EYRAESQPDGIIGIGSWRDFIVCFGSSTIEYFSLTGAT--TVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPAT 255 (472) T ss_pred cccccCCCCceEEEEeeccEEEEEeccceEEEEecCCC--CcCcCceEEcCcceeeecccCcchhhecCceEEEEecCCC Confidence 45577788888888999999999988776 7777652 22233344433 3578877677899999999999874 Q ss_pred eE-EEEEEeeecccccceehhhHHHH-HHHhcCCC----cEE--EEEeCCCCeEEEEEEcCCCeEEEEEEEecCCceeEE Q lcl|Aclame:pro 474 FT-SINRYYAVQDVSSVKNAEDMTAH-VPNYIPNG----VFS--ISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQ 545 (801) Q Consensus 474 ~~-~v~~~~~~~~~~~~~~~~dls~~-~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~g~l~~~ty~~~~~e~~v~ 545 (801) .- .|+. .++|+++-||-| +.+.|..- +.. +.+++.+...++.-..-+ .-+||.- -.+.... T Consensus 256 g~~~V~~-------~~g~qa~rIST~aIE~~i~~y~~~e~~~a~~~s~~~eGH~fy~LtfP~-~Tw~yD~-at~~~~e-- 324 (472) T protein:vir:92 256 GAPSVYI-------IGSGQASPIATASIEKIIRSYTADELATGVMEALRFDSHELLIIHLPR-HVLVYDA-SSSQNGP-- 324 (472) T ss_pred cccEEEE-------ccCceeEEecCHHHHHHHHhcCcchhceeeEEEEEecCeeEEEEEcCC-ceEEEEc-ccCcCCc-- Confidence 21 1222 245666666433 33444332 222 344445555443333333 3334331 1112122 Q ss_pred eEEeeecCCC---eEEEEE----------EEcCCEEEEEEEe--C-CCEEEEEEEEeecCCCCCcCcceeeeeeeeEEee Q lcl|Aclame:pro 546 SWSHWDFGDN---VTVFAA----------QVINSTMTVLMGN--E-HAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYTI 609 (801) Q Consensus 546 aW~~w~~~g~---~~~~~~----------~~~~d~l~~vv~r--~-~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~ 609 (801) -||.-..+.. .+..++ +..+..||.+.-. + .+-.++++...+-- ..+..+ ++|..... T Consensus 325 ~W~~~~sg~~~~~~R~~~~~~~~g~~ivGD~~nG~ly~l~~~~~t~~~~~~~~~~~~P~~---~~dn~R-~~d~eve~-- 398 (472) T protein:vir:92 325 QWCVLKTGLYDDVYRAIDFMYEGNQITCGDKSEAVTGQLQFDISSQYDKQQEHLLFTPIF---KADNAR-CFDLEVES-- 398 (472) T ss_pred eeeeecCCCcccceeEEEEEeeCCeEEEEEcCCCeEEEEeccccccCCCcceEEEEeceE---ecCCCE-EEEEeeec-- Confidence 3777666422 333332 2234566666222 1 12223332211100 001111 23322111 Q ss_pred ccccccccccceeeccccccCcccccceEEEEecCCccccceeeccccccCcE---EEEc-CcccCceEEEEEeeeEEEE Q lcl|Aclame:pro 610 PAGTYNDDTYQTSISLATIYGMNFTKGRVSVVFPDGKIIEVDQPINGWSSDPV---LRLD-GNQEGQVVYIGFNIPFTYT 685 (801) Q Consensus 610 ~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~~~~dG~~~~~~~~~~g~~~~~~---~~i~-~~~~~~~v~vGl~y~~~~~ 685 (801) ..++.... .. ....+-.||..........-...+.. +... ..+.-.. ||+++ ++. T Consensus 399 ~~Gv~q~~-d~----------------v~L~wSddG~~~~~~~~~~~g~~g~~~tr~~~~RlG~~r~~--v~f~~--r~~ 457 (472) T protein:vir:92 399 STGVAQYA-DR----------------LFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRRL--IGFKL--RVI 457 (472) T ss_pred cCCCCCcC-ce----------------EEEEeeccccccccceeeccCCccchhcceeeeeeeecccc--eeEEE--EEE Confidence 11110000 01 12222223332211111110000000 0000 0000011 33322 211 Q ss_pred eCCeeEEecCCCCceeeeeeeeEEEEEEEEEee Q lcl|Aclame:pro 686 FSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYE 718 (801) Q Consensus 686 ~~~~~~~~~~~~g~~~~~~~~r~~i~~~~v~~~ 718 (801) . ..++.|..+++++. T Consensus 458 ~------------------~~~~~l~g~~~~~E 472 (472) T protein:vir:92 458 T------------------KSPVTLSGCQIRLE 472 (472) T ss_pred e------------------cCcceeeeeEEeeC Confidence 1 12234555555555 Done!