Query lcl|Aclame:protein:vir:3529|NCBI_annot:P28|genbank:acc:NP_050989;genbank:gi:9633575;genbank:GeneID:1262322 Match_columns 477 No_of_seqs 46 out of 57 Neff 5.0 Searched_HMMs 1612 Date Fri Nov 29 20:45:01 2013 Command /home/guerois/workspace/virfam/python/lib/hhsearch//hhsearch2 -i .//seq/seq_28 -d /home/guerois/workspace/virfam/python/profile_database/capsid_neck_tail.hhm -glob -cpu 7 -o .//seq/HHR/seq_28_vs_rec_db.hhr No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 protein:vir:3529 Length: 477 # 100.0 8E-232 5E-235 1287.5 52.1 477 1-477 1-477 (477) 2 protein:vir:100960 Length: 472 100.0 9E-223 6E-226 1237.9 50.1 471 7-477 1-472 (472) 3 protein:vir:9268 Length: 472 # 100.0 2E-220 1E-223 1225.4 50.4 471 7-477 1-472 (472) 4 protein:vir:2109 Length: 472 # 100.0 7E-220 4E-223 1222.0 50.6 471 7-477 1-472 (472) 5 protein:vir:105428 Length: 472 100.0 3E-217 2E-220 1207.7 48.7 470 7-477 1-472 (472) 6 protein:vir:177 Length: 472 # 100.0 1E-216 7E-220 1204.6 49.8 470 7-477 1-472 (472) 7 protein:vir:105525 Length: 472 100.0 9E-213 6E-216 1183.0 49.7 471 7-477 1-472 (472) 8 protein:vir:108312 Length: 458 100.0 2E-188 1E-191 1049.7 45.5 440 7-477 1-458 (458) 9 protein:vir:8837 Length: 513 # 99.9 6.2E-26 3.9E-29 158.8 37.0 438 7-477 1-507 (513) 10 protein:vir:3133 Length: 911 # 99.1 5.4E-10 3.3E-13 71.4 26.5 431 1-477 178-732 (911) 11 protein:vir:352 Length: 536 # 99.0 7E-09 4.3E-12 65.3 31.0 427 1-477 3-531 (536) 12 protein:vir:2625 Length: 715 # 98.7 8.3E-08 5.1E-11 59.4 27.7 425 1-477 168-710 (715) 13 protein:vir:95475 Length: 771 98.7 1.2E-07 7.7E-11 58.4 29.0 424 1-477 214-766 (771) 14 protein:vir:102644 Length: 594 96.4 0.00066 4.1E-07 38.0 37.6 445 7-477 1-590 (594) 15 protein:vir:107802 Length: 681 95.5 0.002 1.3E-06 35.4 32.8 434 1-477 96-678 (681) 16 protein:vir:98487 Length: 681 95.5 0.002 1.3E-06 35.4 32.8 434 1-477 96-678 (681) 17 protein:vir:107423 Length: 681 95.5 0.002 1.3E-06 35.4 32.8 434 1-477 96-678 (681) 18 protein:vir:95324 Length: 823 94.9 0.0032 2E-06 34.3 32.5 414 1-477 170-665 (823) 19 protein:vir:1778 Length: 680 # 94.9 0.0032 2E-06 34.2 23.0 296 1-343 318-680 (680) 20 protein:vir:99677 Length: 794 94.7 0.0037 2.3E-06 33.9 36.2 448 1-477 157-737 (794) 21 protein:vir:80253 Length: 777 94.5 0.0042 2.6E-06 33.6 35.1 438 1-477 133-727 (777) 22 protein:vir:94713 Length: 785 94.3 0.0047 2.9E-06 33.3 31.7 439 1-477 151-704 (785) 23 protein:vir:8887 Length: 808 # 93.8 0.0063 3.9E-06 32.6 41.3 450 1-477 119-798 (808) 24 protein:vir:1543 Length: 801 # 92.8 0.0098 6.1E-06 31.6 37.6 436 1-477 165-718 (801) 25 protein:vir:2203 Length: 794 # 92.4 0.012 7.2E-06 31.2 38.0 446 1-477 187-747 (794) 26 protein:vir:3366 Length: 801 # 79.5 0.1 6.4E-05 26.0 33.0 440 1-477 166-718 (801) 27 protein:vir:78957 Length: 826 78.5 0.11 7E-05 25.8 33.8 428 1-477 242-769 (826) 28 protein:vir:7329 Length: 825 # 71.8 0.19 0.00012 24.5 33.1 424 1-477 158-681 (825) 29 protein:vir:10452 Length: 794 69.5 0.22 0.00014 24.2 39.8 453 1-477 168-739 (794) 30 protein:vir:94583 Length: 792 64.5 0.3 0.00019 23.5 34.4 437 1-477 163-737 (792) 31 protein:vir:103790 Length: 768 48.5 0.67 0.00041 21.5 33.7 438 1-477 198-763 (768) 32 protein:vir:97014 Length: 800 40.6 0.96 0.0006 20.7 34.1 440 1-477 201-755 (800) 33 protein:vir:5977 Length: 109 # 39.0 0.49 0.0003 22.3 4.2 39 435-477 1-39 (109) 34 protein:vir:105035 Length: 112 31.9 0.67 0.00042 21.5 3.7 42 433-477 1-43 (112) 35 protein:vir:100244 Length: 109 28.0 0.9 0.00056 20.8 3.7 42 433-477 1-42 (109) 36 protein:vir:1272 Length: 119 # 27.4 1.1 0.00067 20.4 4.0 41 433-477 1-42 (119) 37 protein:vir:193 Length: 112 # 26.6 1.1 0.00065 20.5 3.8 40 433-477 1-40 (112) 38 protein:vir:10366 Length: 124 26.5 1 0.00063 20.5 3.7 41 433-477 1-42 (124) 39 protein:vir:105563 Length: 396 25.7 2 0.0013 18.9 15.1 255 1-312 100-396 (396) 40 protein:vir:100022 Length: 976 25.7 2 0.0013 18.9 33.2 444 1-477 343-931 (976) 41 protein:vir:105647 Length: 800 25.5 2.1 0.0013 18.9 37.1 446 1-477 165-753 (800) 42 protein:vir:6326 Length: 826 # 23.9 2.2 0.0014 18.7 33.0 442 1-477 225-816 (826) 43 protein:vir:1890 Length: 110 # 23.9 0.99 0.00061 20.6 3.1 40 433-477 1-41 (110) 44 protein:vir:100134 Length: 109 23.7 1.3 0.0008 20.0 3.7 42 433-477 1-42 (109) 45 protein:vir:81177 Length: 109 20.5 1.7 0.001 19.4 3.6 40 434-477 1-40 (109) No 1 >protein:vir:3529 Length: 477 # NCBI annotation: P28 # Family: family:all:1540 # MgeID: mge:72 # MgeName: APSE-1 # Cross-refs: genbank:acc:NP_050989;genbank:gi:9633575;genbank:GeneID:1262322 Probab=100.00 E-value=8.2e-232 Score=1287.48 Aligned_cols=477 Identities=100% Similarity=1.497 Sum_probs=472.6 Q ss_pred CchhhccceeceeecccccccccccceeeeeecccccccccccccccccccccCcceeeccchheeeEEEeecCCeEEEE Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVKDIKTADYIDALPVNMLATPKEVLNASGYLRSFPGIEKKQDAKGVSRGVHFNTKNNALYRV 80 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~~~~~~d~i~~~pvNl~~~~~e~~~s~~~L~~~PGl~~~~~~~g~~rG~~~~~~~g~ly~V 80 (477) ||+|+||++|||||++|++++++++|+++++||||||+|||+++|+++|++||||+|+++++||+||+||+++||.|||| T Consensus 1 ~~~~~~m~~~~ipl~~g~~~~~~~~d~~~~~PVN~~a~p~~~~~s~~~L~~~pG~~~~~~~~G~~RG~~~~~~~g~lY~V 80 (477) T protein:vir:35 1 MLSEVFMPKIQIPLAKGLVKDIKTADYIDALPVNMLATPKEVLNASGYLRSFPGIEKKQDAKGVSRGVHFNTKNNALYRV 80 (477) T ss_pred CcccceeeeeccccccccccccccccceeeeeeccceeeccccccccccccCCcceeeccCCccccceeEeecCCeEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred ECCeeEeeeeeEEeecccccEEEEeCCCeEEEEECCCcceEEEEcccceEeecCcccCCCCCCCceeEEEEecceEEEEe Q lcl|Aclame:pro 81 CGNTLYRNDKEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKALSNWPKDKYPQYDLGEVIDVCRNRGRYIWLQ 160 (477) Q Consensus 81 ~G~~Ly~v~~~iG~i~g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~~~~~~~~~p~~~~~~~~dv~~~dgyfV~~~ 160 (477) ||++||+|++++|+|+|+|||+|+||++++||+++|.+++|+||++++++++|++++||+++++++++|||+||||||++ T Consensus 81 ~G~~LY~v~~~vG~I~gsg~VsMa~n~~~~aIv~~g~~~gy~y~~t~~~~~~~~~~~~p~~~l~~~~~v~f~dGyfV~~~ 160 (477) T protein:vir:35 81 CGNTLYRNDKEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKALSNWPKDKYPQYDLGEVIDVCRNRGRYIWLQ 160 (477) T ss_pred ecCeeEeeeeeeeeecccccEEEeeCCcEEEEEECCcceeEEEecccceeeecCccccCCccccceeEEEeeCceEEEee Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eCCCeEEEecccCccCcCCCccceEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecc Q lcl|Aclame:pro 161 KGGERFGVTDLEDESKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIA 240 (477) Q Consensus 161 ~g~~~~~iS~L~d~s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gca 240 (477) ||+++||||+|+|+++++++..||+||++||+||+++++|++|||||++|||||+|||+++|+||+++.+|++|||+||| T Consensus 161 ~gt~~~~iS~L~d~s~~d~~~~FasAE~~pD~Ivgi~~~~~~i~lfG~~TiEvw~ntG~a~f~~p~~r~~~~~mIq~Gca 240 (477) T protein:vir:35 161 KGGERFGVTDLEDESKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIA 240 (477) T ss_pred cCCCeEEEeecCCccccccccccccccCCCCceEEEEeeccEEEEEeccceEEEEecCCCCCCcceeecCCceeeeeccc Confidence 99999999999999999876669999999999999999999999999999999999999999999899899999999999 Q ss_pred cchhheecCCeEEEEecccccCcEEEEccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCCeEEEE Q lcl|Aclame:pro 241 GRDCKCRYQDKYAILSHQSTGQPAVYLIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPKHTLCF 320 (477) Q Consensus 241 a~~s~~~~~~s~~wlg~d~~g~~~Vy~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~~Tw~y 320 (477) ||+|||+++|++||||||++|+++||+++||||||||||+||++|++|+++|||+|||||||||||+||+||||+||||| T Consensus 241 a~~sv~~~~~t~~~l~~d~~g~~~V~~~~g~q~~rIST~aIE~~i~ay~~~e~a~af~~t~~~eGH~fy~LtfP~~Tw~y 320 (477) T protein:vir:35 241 GRDCKCRYQDKYAILSHQSTGQPAVYLIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPKHTLCF 320 (477) T ss_pred CchhhhhhCceEEEEecCCCcccEEEEccCceeEEecCHHHHHHHHhcCCcchhceeEEEEEeCCeeEEEEEcCCceEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eccccCcceeeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEeeceeccCCceEEEEE Q lcl|Aclame:pro 321 DGSASHQYSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIKADNARLFDFE 400 (477) Q Consensus 321 D~~t~~Wher~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~tP~~~~~~~R~~~~e 400 (477) |++|++|||||++++++++++|||++|||+++|||+|||++||+||+||++.++|+|+|++|++++|+++++|+|+|++| T Consensus 321 D~at~~w~e~W~~~~~g~~~~~~Ra~~~~~~~g~~~vGD~~ng~l~~ld~~~~~d~g~~i~~~~~~p~~~~d~~Rv~~~e 400 (477) T protein:vir:35 321 DGSASHQYSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIKADNARLFDFE 400 (477) T ss_pred ecccccccceeeeeccCCccCceEEEEEEEeCCeEEEEEcCCCeEEEECCCCcccCCCccceEEecceeeCCCCeEEEEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred EEEEeCCCCCCceEEEEeeeCccccCcceEeccCCCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 401 LEASTGVAQIADKLFLSVTTDGINYSREQLIEQNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 401 le~~~Gvgq~~~~v~l~~SdDG~tws~~~~~~~g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) ||+++|+||.+++|||||||||+|||+|||+++|++|||+||++||||||+|+|||||||+++++||+|++|++||| T Consensus 401 l~~~tGvgq~~d~v~L~~sddG~~~~~~~~~~~g~~g~~~~r~~~~RlG~~r~~vgf~~r~~~~~pv~l~~~~~~~e 477 (477) T protein:vir:35 401 LEASTGVAQIADKLFLSVTTDGINYSREQLIEQNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) T ss_pred EEEecCcCccCceEEEEEeccccccccceeecCCCccccccceeeeeeeeceeccceEEEEEecCCceeccceeEeC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 No 2 >protein:vir:100960 Length: 472 # NCBI annotation: gp10 # Family: family:all:1540 # MgeID: mge:1509 # MgeName: ST104 # Cross-refs: genbank:acc:YP_006412;genbank:gi:46358704;genbank:GeneID:2777110 Probab=100.00 E-value=9.2e-223 Score=1237.87 Aligned_cols=471 Identities=60% Similarity=1.053 Sum_probs=464.4 Q ss_pred cceeceeecccccccccccceeeeeecccccccccccccccccccccCcceeeccchheeeEEEeecCCeEEEEECCeeE Q lcl|Aclame:pro 7 MPKIQIPLAKGLVKDIKTADYIDALPVNMLATPKEVLNASGYLRSFPGIEKKQDAKGVSRGVHFNTKNNALYRVCGNTLY 86 (477) Q Consensus 7 M~~~~iPl~~G~~~~~~~~d~i~~~pvNl~~~~~e~~~s~~~L~~~PGl~~~~~~~g~~rG~~~~~~~g~ly~V~G~~Ly 86 (477) |++|||||++|++|+++++|++|++|||+||+||+++|||++||+||||.++++++|++||++|++++|.||||||++|| T Consensus 1 m~~~~ipl~~g~~~~~~~a~~~~~~pvn~y~~~~~~~~ss~~Lr~~pG~~~~a~~~G~~RG~~~~~~~~~ly~V~G~~Ly 80 (472) T protein:vir:10 1 MPIQQLPMMKGMGKDFKNADYIDYLPINMLATPKEVLNSSGYLRSFPGIAKRNDVNGVSRGVEYNTAQNAVYRVCGGKLY 80 (472) T ss_pred CceeecccccccccCCCcCcceeeeeeccccccccccccccceeecccceeecCCCCcccceeeeeeCCeEEEEeCcceE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeeEEeecccccEEEEeCCCeEEEEECCCcceEEEEcccceEeecC-cccCCCCCCCceeEEEEecceEEEEeeCCCe Q lcl|Aclame:pro 87 RNDKEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKALSNWP-KDKYPQYDLGEVIDVCRNRGRYIWLQKGGER 165 (477) Q Consensus 87 ~v~~~iG~i~g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~~~~~-~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~ 165 (477) ++++++|+|+|+|||+|+||+++++|++++.+++|+||++++++..++ |+.|||+++++++||||+||||||++||+++ T Consensus 81 ~v~~~iG~i~gsgrVsMa~n~~~~~v~~~~~~~~Y~~~~~~~t~~~~~~d~~f~~~dl~~~~dv~f~dGyfV~~~~gt~~ 160 (472) T protein:vir:10 81 KGEAVVGDVAGSGRVSMAHGRTSQAVGVNGQLIEYRYDGAVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDS 160 (472) T ss_pred EEEeeEeeccCcccEEEeeCCeEEEEEECCceeEEEEecchhhhhcccCccccccccccceeEEEEecceEEEccCCCce Confidence 999999999999999999999999999999999999999999998755 7899999999999999999999999999999 Q ss_pred EEEecccCccCcCCCccceEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhh Q lcl|Aclame:pro 166 FGVTDLEDESKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCK 245 (477) Q Consensus 166 ~~iS~L~d~s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~ 245 (477) ||||+|+|+++++++.+||+||++||+||+++++|++|||||++|||||+|||++|+++++|+|+||+|||+|||||+|| T Consensus 161 ~~iS~l~d~~~~~~y~~fa~AE~~pD~Ivgi~~~~~~l~lfG~~TiEvw~ntG~ad~~~fpy~r~~g~~i~~Gcaa~~sv 240 (472) T protein:vir:10 161 WFITDLEDESHPDRYSAEYRAESQPDGIIGIGSWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCK 240 (472) T ss_pred EEEeccCCccccccccccccccCCCCceEEEEeeccEEEEEeccceEEEEecCCCCcCcCceEEcCcceeeecccCcchh Confidence 99999999999988777999999999999999999999999999999999999999777779999999999999999999 Q ss_pred eecCCeEEEEecccccCcEEEEccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCCeEEEEecccc Q lcl|Aclame:pro 246 CRYQDKYAILSHQSTGQPAVYLIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPKHTLCFDGSAS 325 (477) Q Consensus 246 ~~~~~s~~wlg~d~~g~~~Vy~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~~Tw~yD~~t~ 325 (477) |++++++||||||++|+++||+++||||||||||+||++|++|+++|++.|+|||||||||+||+||||+||||||++|+ T Consensus 241 ~~~~~s~~~l~~~~~g~~~V~~~~g~qa~rIST~aIE~~i~~y~~~e~~~A~~~t~~~~GH~fy~LtfP~~Tw~yD~at~ 320 (472) T protein:vir:10 241 TPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTAEELATGVMETLRFDSHELLIIHLPRHVLVYDASSS 320 (472) T ss_pred hecCceEEEEecCCCcccEEEEccCceeEEecCHHHHHHHHhcCCccccceEEEEEEeCCeEEEEEEcCCeeEEEEcccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CcceeeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEeeceeccCCceEEEEEEEEEe Q lcl|Aclame:pro 326 HQYSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIKADNARLFDFELEAST 405 (477) Q Consensus 326 ~Wher~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~tP~~~~~~~R~~~~ele~~~ 405 (477) +||||||+++++++|+|||++++|++||||+|||++||+||+||++++||+|+|++|++++|++|++|+|+|++|||+++ T Consensus 321 ~w~erw~~~~~g~~~~~~R~~~~~~~~g~~ivGD~~nG~ly~ld~~~~t~~g~~~~~~~~~p~l~~dn~R~~d~eve~~~ 400 (472) T protein:vir:10 321 QNGPQWCVLKTGLYDDVYRAVDFMYEGNQITCGDKSEALTGQLQFDISSQYGLQQEHLLFTPLFKADNARCFDLEVESST 400 (472) T ss_pred cccceeeeecCCCcccceeEEEEEeeCCeEEEEEcCCCeEEEEecccCCCCCCcccceEEcccccCCCCEEEEEeeeccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCCCceEEEEeeeCccccCcceEeccCCCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 406 GVAQIADKLFLSVTTDGINYSREQLIEQNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 406 Gvgq~~~~v~l~~SdDG~tws~~~~~~~g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |++|++|+|||||||||+|||+|||+++|++|||+||++||||||+|+||||||||++++||+|++|++||| T Consensus 401 Gv~~~~d~v~L~wSddG~~~~~~~~~~~g~~g~~~tr~~~~RlG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:10 401 GVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVIWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred CCCCcCcEEEEEeeccccccccceeeccCCccchhcceeeeeeeecccceeEEEEEEecCcceeeeeEEeeC Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 No 3 >protein:vir:9268 Length: 472 # NCBI annotation: 10 # Family: family:all:1540 # MgeID: mge:164 # MgeName: ST64T # Cross-refs: genbank:acc:NP_720332;genbank:gi:24371590;genbank:GeneID:955815 Probab=100.00 E-value=1.7e-220 Score=1225.38 Aligned_cols=471 Identities=61% Similarity=1.060 Sum_probs=464.0 Q ss_pred cceeceeecccccccccccceeeeeecccccccccccccccccccccCcceeeccchheeeEEEeecCCeEEEEECCeeE Q lcl|Aclame:pro 7 MPKIQIPLAKGLVKDIKTADYIDALPVNMLATPKEVLNASGYLRSFPGIEKKQDAKGVSRGVHFNTKNNALYRVCGNTLY 86 (477) Q Consensus 7 M~~~~iPl~~G~~~~~~~~d~i~~~pvNl~~~~~e~~~s~~~L~~~PGl~~~~~~~g~~rG~~~~~~~g~ly~V~G~~Ly 86 (477) |++|||||++|++|+++++|++|++|||+||+||++++||++||+||||.++++++|++||++|++++|.||||||++|| T Consensus 1 m~~~~ipl~~g~~~~~~~a~~~~~~pvn~y~~~~~~~~ss~~Lr~~pG~~~~a~~~G~~RG~~~~~~~~~ly~V~G~~Ly 80 (472) T protein:vir:92 1 MPIQQLPMMKGMGKDFKNADYIDYLPINMLATPKEVLDSSGYLRSFPGIAKRNDVNGVSRGVEYNTAQNAVYRVCGGKLY 80 (472) T ss_pred CceeeccccccccccCccCcceeeeecccccccccccccccceeecccceeecCCCCcccceeeeeeCCeEEEEeCcceE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeeEEeecccccEEEEeCCCeEEEEECCCcceEEEEcccceEeecC-cccCCCCCCCceeEEEEecceEEEEeeCCCe Q lcl|Aclame:pro 87 RNDKEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKALSNWP-KDKYPQYDLGEVIDVCRNRGRYIWLQKGGER 165 (477) Q Consensus 87 ~v~~~iG~i~g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~~~~~-~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~ 165 (477) ++++++|+|+|+|||+|+||+++++|++++.+++|+||++++++..++ |+.|||+++++++||||+||||||++||+++ T Consensus 81 ~v~~~iG~i~gsgrVsMa~n~~~~av~~~~~~~~Y~~~~~~~t~~~~~~d~~f~~~dl~~~~dv~f~dGyfV~~~~gt~~ 160 (472) T protein:vir:92 81 KGEAVVGDVAGSGRVSMAHGRTSQAVGVNGQLIEYRYDGAVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDS 160 (472) T ss_pred EEEeeEeeccCcccEEEecCCeEEEEEECCceeEEEEecchhhhhcccCccccccccccceeEEEEecceEEEccCCCce Confidence 999999999999999999999999999999999999999999998755 7899999999999999999999999999999 Q ss_pred EEEecccCccCcCCCccceEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhh Q lcl|Aclame:pro 166 FGVTDLEDESKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCK 245 (477) Q Consensus 166 ~~iS~L~d~s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~ 245 (477) ||||+|+|+++++++.+||+||++||+||+|+++|++|||||++|||||+|||++|+++++|+|+||+|||+|||||+|| T Consensus 161 ~~iS~l~d~~~~~~y~~fa~AE~~pD~Ivgi~~~~~~l~lfG~~TiEvw~ntG~ad~~~fpy~r~~g~~i~~Gcaa~~sv 240 (472) T protein:vir:92 161 WFITDLEDESHPDRYSAEYRAESQPDGIIGIGSWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCK 240 (472) T ss_pred EEEeccCCccccccccccccccCCCCceEEEEeeccEEEEEeccceEEEEecCCCCcCcCceEEcCcceeeecccCcchh Confidence 99999999999988777999999999999999999999999999999999999999777779999999999999999999 Q ss_pred eecCCeEEEEecccccCcEEEEccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCCeEEEEecccc Q lcl|Aclame:pro 246 CRYQDKYAILSHQSTGQPAVYLIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPKHTLCFDGSAS 325 (477) Q Consensus 246 ~~~~~s~~wlg~d~~g~~~Vy~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~~Tw~yD~~t~ 325 (477) |++++++||||||++|+++||+++||||||||||+||++|++|+.+|+..|++|+||||||+||+||||+||||||++|+ T Consensus 241 ~~~~~s~~~l~~~~~g~~~V~~~~g~qa~rIST~aIE~~i~~y~~~e~~~a~~~s~~~eGH~fy~LtfP~~Tw~yD~at~ 320 (472) T protein:vir:92 241 TPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTADELATGVMEALRFDSHELLIIHLPRHVLVYDASSS 320 (472) T ss_pred hecCceEEEEecCCCcccEEEEccCceeEEecCHHHHHHHHhcCcchhceeeEEEEEecCeeEEEEEcCCceEEEEcccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CcceeeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEeeceeccCCceEEEEEEEEEe Q lcl|Aclame:pro 326 HQYSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIKADNARLFDFELEAST 405 (477) Q Consensus 326 ~Wher~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~tP~~~~~~~R~~~~ele~~~ 405 (477) +|||||+.++++.+|+|||++++|++||||+|||++||+||+||++.++|+|+|++|++++|+++++|+|+|++|||+++ T Consensus 321 ~~~e~W~~~~sg~~~~~~R~~~~~~~~g~~ivGD~~nG~ly~l~~~~~t~~~~~~~~~~~~P~~~~dn~R~~d~eve~~~ 400 (472) T protein:vir:92 321 QNGPQWCVLKTGLYDDVYRAIDFMYEGNQITCGDKSEAVTGQLQFDISSQYDKQQEHLLFTPIFKADNARCFDLEVESST 400 (472) T ss_pred cCCceeeeecCCCcccceeEEEEEeeCCeEEEEEcCCCeEEEEeccccccCCCcceEEEEeceEecCCCEEEEEeeeccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCCCceEEEEeeeCccccCcceEeccCCCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 406 GVAQIADKLFLSVTTDGINYSREQLIEQNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 406 Gvgq~~~~v~l~~SdDG~tws~~~~~~~g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |++|++|+|||||||||+|||+|||+++|++|||+||++||||||+|+||||||||++++||+|++|++||| T Consensus 401 Gv~q~~d~v~L~wSddG~~~~~~~~~~~g~~g~~~tr~~~~RlG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:92 401 GVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred CCCCcCceEEEEeeccccccccceeeccCCccchhcceeeeeeeecccceeEEEEEEecCcceeeeeEEeeC Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 No 4 >protein:vir:2109 Length: 472 # NCBI annotation: head completion protein # Family: family:all:1540 # MgeID: mge:46 # MgeName: P22 # Cross-refs: genbank:acc:NP_059633;genbank:gi:9635541;genbank:GeneID:1262840 Probab=100.00 E-value=7.2e-220 Score=1222.00 Aligned_cols=471 Identities=60% Similarity=1.064 Sum_probs=463.6 Q ss_pred cceeceeecccccccccccceeeeeecccccccccccccccccccccCcceeeccchheeeEEEeecCCeEEEEECCeeE Q lcl|Aclame:pro 7 MPKIQIPLAKGLVKDIKTADYIDALPVNMLATPKEVLNASGYLRSFPGIEKKQDAKGVSRGVHFNTKNNALYRVCGNTLY 86 (477) Q Consensus 7 M~~~~iPl~~G~~~~~~~~d~i~~~pvNl~~~~~e~~~s~~~L~~~PGl~~~~~~~g~~rG~~~~~~~g~ly~V~G~~Ly 86 (477) |+||||||++|++|+.+++|++|++||||||+||+.++|+++||||||++|+++++||+||+||++.+|.||||||++|| T Consensus 1 m~~~q~Pl~~g~~~~~~~~d~~~~~pVN~~a~~~~~~~s~~~lr~tPG~~~~~~~~g~~RG~~~~t~~~~ly~V~G~~LY 80 (472) T protein:vir:21 1 MPIQQLPMMKGMGKDFKNADYIDYLPVNMLATPKEILNSSGYLRSFPGITKRYDMNGVSRGVEYNTAQNAVYRVCGGKLY 80 (472) T ss_pred CceEEeeccccccccccccceeeeeeeeeeeeccCCcccceeeeecCCcceeccCCCceeeeeecccCCeEEEEeCCceE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeeEEeecccccEEEEeCCCeEEEEECCCcceEEEEcccceEeecC-cccCCCCCCCceeEEEEecceEEEEeeCCCe Q lcl|Aclame:pro 87 RNDKEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKALSNWP-KDKYPQYDLGEVIDVCRNRGRYIWLQKGGER 165 (477) Q Consensus 87 ~v~~~iG~i~g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~~~~~-~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~ 165 (477) +|++++|+|+|+|||+|+||+++++|++++.+++|+||++++++..++ |+.|||+++++++||||+||||||++||+++ T Consensus 81 ~v~~~~G~i~gsgrVsMa~n~~~~~v~~~~~~~~Y~~~~~~~t~~~~~~d~~f~~~dl~~~~dv~f~dGyfV~~~~gt~~ 160 (472) T protein:vir:21 81 KGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDS 160 (472) T ss_pred EEeeeeeeecccccEEEeeCCeEEEEEECCceeEEEEecchhhhhcccCccccccccccceeEEEEecceEEEccCCcce Confidence 999999999999999999999999999999999999999999998755 7899999999999999999999999999999 Q ss_pred EEEecccCccCcCCCccceEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhh Q lcl|Aclame:pro 166 FGVTDLEDESKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCK 245 (477) Q Consensus 166 ~~iS~L~d~s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~ 245 (477) ||||+|+|+++++++.+|||||++||+||+|+++|++|||||++|||||+|||++|+++++|+|+||+|||+|||||+|| T Consensus 161 f~is~l~d~~~~~~y~~FatAE~~pD~Iv~i~~~~~~l~lfG~~TiEvw~ntG~ad~~~fpy~r~~g~~iq~Gcaa~~sv 240 (472) T protein:vir:21 161 WFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTAGAALYVAQPSLMVQKGIAGTYCK 240 (472) T ss_pred eEEecCCCCccccCCccceeeccCCCceEEEEeeccEEEEEeccceEEEEecCCCCcCcCceEEcCcceeeecccCcchh Confidence 99999999999988778999999999999999999999999999999999999999777779999999999999999999 Q ss_pred eecCCeEEEEecccccCcEEEEccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCCeEEEEecccc Q lcl|Aclame:pro 246 CRYQDKYAILSHQSTGQPAVYLIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPKHTLCFDGSAS 325 (477) Q Consensus 246 ~~~~~s~~wlg~d~~g~~~Vy~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~~Tw~yD~~t~ 325 (477) |++++++||||||++|+++||+++||||||||||+||++|++|+++|++.|+|||||||||+||+||||+||||||++|+ T Consensus 241 ~~~~~s~~~l~~~~~g~~~V~~~~g~qa~rIST~aIE~~i~~y~~~e~~~A~~~t~~~eGH~fy~LtfP~~Tw~yD~at~ 320 (472) T protein:vir:21 241 TPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTAEEMATGVMETLRFDSHELLIIHLPRHVLVYDASSS 320 (472) T ss_pred hecCceEEEEecCCCcccEEEEccCceeEEecCHHHHHHHHhcCCccccceEEEEEEeCCeEEEEEEcCCeeEEEEcccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CcceeeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEeeceeccCCceEEEEEEEEEe Q lcl|Aclame:pro 326 HQYSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIKADNARLFDFELEAST 405 (477) Q Consensus 326 ~Wher~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~tP~~~~~~~R~~~~ele~~~ 405 (477) +|||||++++++.+|+|||++++|+++|||+|||++||+||+|+++..++.++++++++++|+++++|+|+|++|||+++ T Consensus 321 ~~~e~W~~~~sg~~~~~~R~~~~~~~~g~~ivGD~~nG~ly~L~fd~~~~~d~~~~~~r~~p~~~~dn~R~fd~eve~~~ 400 (472) T protein:vir:21 321 QNGPQWCVLKTGLYDDVYRGVDFMYEGNQITCGDKSEAVVGQLQFDISSQYDKQQEHLLFTPLFKADNARCFDLEVESST 400 (472) T ss_pred ccCceeeeeccCCCcCceeEEEEEeeCCeEEEEEcCCCeEEEEEecccccCCCcCcEEEEccceeCCCCEEEEEeeeccC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCCCceEEEEeeeCccccCcceEeccCCCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 406 GVAQIADKLFLSVTTDGINYSREQLIEQNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 406 Gvgq~~~~v~l~~SdDG~tws~~~~~~~g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |++|++|+|||||||||+|||+|||+++|++|||+||++||||||+|+||||||||++++||+|++|++||| T Consensus 401 Gv~q~~d~v~L~wSddG~~~~~~~~~~~g~~g~~~tr~~~~RlG~~r~~v~f~~r~~~~~~~~l~g~~~~~E 472 (472) T protein:vir:21 401 GVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE 472 (472) T ss_pred CCCCcCcEEEEEeeccccccccceeeccCCccchhcceeeeeeeecccceeEEEEEEecCcceeeeeEEeeC Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 No 5 >protein:vir:105428 Length: 472 # NCBI annotation: gene 8 protein # Family: family:all:1540 # MgeID: mge:1556 # MgeName: Sf6 # Cross-refs: genbank:acc:NP_958184;genbank:gi:41057286;genbank:GeneID:2716675 Probab=100.00 E-value=2.9e-217 Score=1207.69 Aligned_cols=470 Identities=59% Similarity=1.041 Sum_probs=458.2 Q ss_pred cceeceeecccccccccccceeeeeecccccccccccccccccccccCcceeeccchheeeEEEeecCCeEEEEECCeeE Q lcl|Aclame:pro 7 MPKIQIPLAKGLVKDIKTADYIDALPVNMLATPKEVLNASGYLRSFPGIEKKQDAKGVSRGVHFNTKNNALYRVCGNTLY 86 (477) Q Consensus 7 M~~~~iPl~~G~~~~~~~~d~i~~~pvNl~~~~~e~~~s~~~L~~~PGl~~~~~~~g~~rG~~~~~~~g~ly~V~G~~Ly 86 (477) |+||||||++|++++.+++|+++++||||||+||+.++|+++|||||||+|+++++|++||++|+++||.||||||++|| T Consensus 1 m~~~~~pl~~G~~~~~~~~d~~~~~pVN~~a~~~~~~~s~~~l~~tPGl~~~a~v~G~~RG~~~~~~~g~lY~V~G~~LY 80 (472) T protein:vir:10 1 MPIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGIAKRSDVNGVSRGVEYNMAQNAVYRVCGGKLY 80 (472) T ss_pred CCeeeeeeccCceeeccccchhheeeeeeeeeccCCCcccceeecCCCceeeccCCccccceEEEeeCCeEEEEecceEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeeEEeecccccEEEEeCCCeEEEEECCCcceEEEEcccceEeecC-cccCCCCCCCceeEEEEecceEEEEeeCCCe Q lcl|Aclame:pro 87 RNDKEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKALSNWP-KDKYPQYDLGEVIDVCRNRGRYIWLQKGGER 165 (477) Q Consensus 87 ~v~~~iG~i~g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~~~~~-~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~ 165 (477) ++++++|+|+|+|||+|+||+++++|+++|.+++|+||+.++++.+++ ++.||++++++++||||+||||||++||+++ T Consensus 81 ~v~~~iGsiag~grVsMa~n~~~~av~~~g~~~~Y~yd~~v~t~~~~~~d~~~p~~dlg~~~dv~f~dGyfV~~~~Gt~~ 160 (472) T protein:vir:10 81 KGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPTDSGFTQYELGSVRDITRLRGRYAWSKDGTDS 160 (472) T ss_pred eeecceecccCcccEEEecCCcEEEEEECCceeEEEeeccchhhhccccccccccccccceeeeeeecceEEEeccCcce Confidence 999999999999999999999999999999999999999999887655 7899999999999999999999999999999 Q ss_pred EEEecccCccCcCCCccceEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhh Q lcl|Aclame:pro 166 FGVTDLEDESKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCK 245 (477) Q Consensus 166 ~~iS~L~d~s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~ 245 (477) ||||+|+|++++++++.||+||++||+||+++++|++|||||++|||||+|||+++...++|+|+||+|||+|||||+|| T Consensus 161 ~~is~l~d~~~~~~y~~fa~AE~~pD~Ivgi~~~~~~i~lfG~~TiEvw~ntG~a~~~~fpy~r~~g~~iq~Gcaa~~sv 240 (472) T protein:vir:10 161 WFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTAGAALYVAQPSLMVQKGIAGTYCK 240 (472) T ss_pred EEEeccCCccccccccccccccCCCCceEEEEeeccEEEEEeccceEEEEecCCCCcccCceeecccceeeecccCcchh Confidence 99999999999999999999999999999999999999999999999999999999433338999999999999999999 Q ss_pred eecCCeEEEEecccccCcEEEEccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCCeEEEEecccc Q lcl|Aclame:pro 246 CRYQDKYAILSHQSTGQPAVYLIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPKHTLCFDGSAS 325 (477) Q Consensus 246 ~~~~~s~~wlg~d~~g~~~Vy~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~~Tw~yD~~t~ 325 (477) |++++++||||||++|+++||+++||||||||||+||++|++|+..|++.|+|||||||||+||+||||+||||||++|+ T Consensus 241 ~~~~~t~~~l~~d~~g~~~V~~~~g~~~~rIST~aIE~~i~~y~~~e~~dA~~~t~~~~GH~fy~LtfP~~Tw~yD~~t~ 320 (472) T protein:vir:10 241 TPFADSYAFISNPATGAPSVYIIGSGQVSPIASASIEKILRSYTADELADGVMESLRFDAHELLIIHLPRHVLVYDASSS 320 (472) T ss_pred hecCceEEEEecCCccccEEEEccCceeEEecCHHHHHHHHhcCCccccceeEEEEEeCCeEEEEEEcCCceeEeecccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CcceeeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEeeceeccCCceEEEEEEEEEe Q lcl|Aclame:pro 326 HQYSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIKADNARLFDFELEAST 405 (477) Q Consensus 326 ~Wher~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~tP~~~~~~~R~~~~ele~~~ 405 (477) +||||||+++++++++|||++|||+++|||+|||++||+||+||+++++|+|+||+|++++|+++++|+|+|++|||+++ T Consensus 321 ~Wherw~~~~~g~~~~~~Ra~~~~~~~g~~~vGD~~ng~ly~l~~~~~td~G~~i~~~~~~p~~~~d~~Rv~d~~ve~~~ 400 (472) T protein:vir:10 321 ANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESVTGKLQFDISSQYGLQQEHLLFTPLFKADNARCFDLEVESST 400 (472) T ss_pred cCceeeeeecCCCccCceEEEEEEEeCCeEEEEEcCCCeEEEEcccCcCcCCCcceEEEeccceeCCCCeEEEEEEEeec Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCCCce-EEEEeeeCccccCcceEeccCCCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 406 GVAQIADK-LFLSVTTDGINYSREQLIEQNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 406 Gvgq~~~~-v~l~~SdDG~tws~~~~~~~g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |++|.+++ +||+||| |++||+|+++++|++|||+||++||||||+|+|||||+||++|+||+|+||||||| T Consensus 401 G~~~~adp~~~~~~sD-g~~~g~~~~~~~~~~g~~~~R~~~~RlG~~r~~vgf~~r~~~~~~v~l~ga~~~~e 472 (472) T protein:vir:10 401 GVAQYADRLFLSATTD-GINYGREQMIEQNEPFVYDKRVLWKRVGRIRKNVGFKLRVITKSPVTLSGAQIRIE 472 (472) T ss_pred CCCcccCceEEEeccC-CcccchhhhhhhccCcccccceeeeeeeeccccceEEEEEEeccccceeeeeEEeC Confidence 99998766 5577777 99999999999999999999999999999999999999999999999999999999 No 6 >protein:vir:177 Length: 472 # NCBI annotation: DNA stabilization protein # Family: family:all:1540 # MgeID: mge:5 # MgeName: HK620 # Cross-refs: genbank:acc:NP_112082;genbank:gi:13559872;genbank:GeneID:920982 Probab=100.00 E-value=1.1e-216 Score=1204.60 Aligned_cols=470 Identities=60% Similarity=1.053 Sum_probs=460.5 Q ss_pred cceeceeecccccccccccceeeeeecccccccccccccccccccccCcceeeccchheeeEEEeecCCeEEEEECCeeE Q lcl|Aclame:pro 7 MPKIQIPLAKGLVKDIKTADYIDALPVNMLATPKEVLNASGYLRSFPGIEKKQDAKGVSRGVHFNTKNNALYRVCGNTLY 86 (477) Q Consensus 7 M~~~~iPl~~G~~~~~~~~d~i~~~pvNl~~~~~e~~~s~~~L~~~PGl~~~~~~~g~~rG~~~~~~~g~ly~V~G~~Ly 86 (477) |+||||||++|++++.+++|+++++||||||+||+.++|+++|||||||+|+++++|++||++|+++||.||||||++|| T Consensus 1 m~~~~~Pl~~G~~~~~~~~d~~~~~pVN~~a~~~~~~~s~~~l~~tPGl~~~a~v~G~~RG~~~~~~~g~lY~V~G~~LY 80 (472) T protein:vir:17 1 MPIQQLPLMKGVGKDFRNADYIDYLPVNMLATPKEILNSSGYLRSFPGIAKRSDVNGVSRGVEYNMAQNAVYRVCGGKLY 80 (472) T ss_pred CCeeeeeeccCceeeccccchhheeeeeeeeeccCCCcccceeecCCCceeeccCCccccceEEEeeCCeEEEEecceEe Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeeEEeecccccEEEEeCCCeEEEEECCCcceEEEEcccceEeecC-cccCCCCCCCceeEEEEecceEEEEeeCCCe Q lcl|Aclame:pro 87 RNDKEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKALSNWP-KDKYPQYDLGEVIDVCRNRGRYIWLQKGGER 165 (477) Q Consensus 87 ~v~~~iG~i~g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~~~~~-~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~ 165 (477) ++++++|+|+|+|||+|+||+++++|+++|.+++|+||+.++++.+++ ++.||++++++++||||+||||||++||+++ T Consensus 81 ~v~~~iGsiag~grVsMa~n~~~~av~~~g~~~~Y~y~~~v~t~~~~~~d~~~~~~dlg~~~dv~f~dGyfV~~~~Gt~~ 160 (472) T protein:vir:17 81 KGESEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPTDSGFTQYELGSVRDITRLRGRYAWSKDGTDS 160 (472) T ss_pred eeecceecccCcccEEEecCCcEEEEEECCceeEEEeeccchhhhccccccccccccccceeeeeeecceEEEeccCcce Confidence 999999999999999999999999999999999999999999887655 7899999999999999999999999999999 Q ss_pred EEEecccCccCcCCCccceEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhh Q lcl|Aclame:pro 166 FGVTDLEDESKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCK 245 (477) Q Consensus 166 ~~iS~L~d~s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~ 245 (477) ||||+|+|++++++++.||+||++||+||+++++|++|||||++|||||+|||++++++++|+|+||+|||+|||||+|| T Consensus 161 ~~is~l~d~~~~~~y~~fa~AE~~pD~Ivgi~~~~~~i~lfG~~TiEvw~ntG~a~~~~fpy~r~~g~~iq~Gcaa~~sv 240 (472) T protein:vir:17 161 WFITDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCK 240 (472) T ss_pred EEEeccCCccccccccccccccCCCCceEEEEeeccEEEEEeccceEEEEeeCCCCCCcCceeecCcceeeecccCcchh Confidence 99999999999999999999999999999999999999999999999999999999887779999999999999999999 Q ss_pred eecCCeEEEEecccccCcEEEEccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCCeEEEEecccc Q lcl|Aclame:pro 246 CRYQDKYAILSHQSTGQPAVYLIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPKHTLCFDGSAS 325 (477) Q Consensus 246 ~~~~~s~~wlg~d~~g~~~Vy~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~~Tw~yD~~t~ 325 (477) |++++++||||||++|+++||+++||||||||||+||++|++|+..|++.|+|||||||||+||+||||+||||||++|+ T Consensus 241 ~~~~~t~~~l~~d~~g~~~V~~~~g~~~~rIST~aIE~~i~~y~~~e~~dA~~~t~~~~GH~fy~LtfP~~Tw~yD~~t~ 320 (472) T protein:vir:17 241 TPFADSYAFISNPATGAPSVYIIGSGQVSPISSASIEKILRSYTADELADGVMESLRFDAHELLIIHLPRHVLVYDASSS 320 (472) T ss_pred hecCceEEEEecCCccccEEEEccCceeEEecCHHHHHHHHhcCCccccceeEEEEEeCCeEEEEEEcCCceeEeecccc Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CcceeeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEeeceeccCCceEEEEEEEEEe Q lcl|Aclame:pro 326 HQYSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIKADNARLFDFELEAST 405 (477) Q Consensus 326 ~Wher~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~tP~~~~~~~R~~~~ele~~~ 405 (477) +||||||+++++++++|||++|||+++|||+|||++||+||+||+++++|+|+|++|++++|+++++++|||++|||+.+ T Consensus 321 ~Wherw~~~~~g~~~~~~Ra~~~~~~~g~~~vGD~~ng~ly~ld~~~~td~g~pi~~~~~~p~~~~~~~RV~d~el~~~t 400 (472) T protein:vir:17 321 ANGPQWCVLKTGLYDDVYRAIDFIYEGNQITCGDKLESVTGKLQFDISSQYDKQQEHLLFTPLFKADNARVFDLEVESST 400 (472) T ss_pred cCceeeeeecCCCccCceEEEEEEEeCCeEEEEEcCCCeEEEEcccCcCCCCceeEEEEecceeeCCCceEEEEEEeeeC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCCCceEE-EEeeeCccccCcceEeccCCCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 406 GVAQIADKLF-LSVTTDGINYSREQLIEQNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 406 Gvgq~~~~v~-l~~SdDG~tws~~~~~~~g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |++|.+|++| |+||| |++||+|+++++|++|||+||++||||||+|+||||||||++|+||+|++||+||| T Consensus 401 G~~~~adp~~l~~~sD-g~~~g~~~~~~~~~~g~~~~R~~~~RlG~~r~~v~f~~~~~~~~~~~l~~a~~~~e 472 (472) T protein:vir:17 401 GVAQYADRLFLSATTD-GINYGREQMIEQNEPFVYDKRVLWKRVGRIRKNVGFKLRVITKSPVTLSGCQIRIE 472 (472) T ss_pred CcccCCCceEEEcccC-CcccchhhhhhhccCcccccceeeeeeeeccccceEEEEEeecccceeeeeEEEeC Confidence 9999877655 67877 99999999999999999999999999999999999999999999999999999999 No 7 >protein:vir:105525 Length: 472 # NCBI annotation: phage DNA stabilization protein # Family: family:all:1540 # MgeID: mge:1463 # MgeName: phiSG1 # Cross-refs: genbank:acc:YP_516194;genbank:gi:89885997;genbank:GeneID:3964385 Probab=100.00 E-value=9.4e-213 Score=1183.00 Aligned_cols=471 Identities=61% Similarity=1.078 Sum_probs=461.4 Q ss_pred cceeceeecccccccccccceeeeeecccccccccccccccccccccCcceeeccchheeeEEEeecCCeEEEEECCeeE Q lcl|Aclame:pro 7 MPKIQIPLAKGLVKDIKTADYIDALPVNMLATPKEVLNASGYLRSFPGIEKKQDAKGVSRGVHFNTKNNALYRVCGNTLY 86 (477) Q Consensus 7 M~~~~iPl~~G~~~~~~~~d~i~~~pvNl~~~~~e~~~s~~~L~~~PGl~~~~~~~g~~rG~~~~~~~g~ly~V~G~~Ly 86 (477) |+||||||++|++|+++++|+++.+||||||+||+.+||+++||++||++|+++++||+||+||+++||+||||||++|| T Consensus 1 m~~~q~pl~~g~~~~~~~~~~~~~lpvN~y~~p~~~~~ss~~lr~~PG~~~~~~~~g~~RG~~~~~~~~~lY~V~G~~Ly 80 (472) T protein:vir:10 1 MAIMQLPLLRGLGKARDDADYIDALPVNMLATPKPVLNASGYLRSFPGITHKAEVAGVSRGVQYNTHEKTVYRGLGNQLY 80 (472) T ss_pred CCceeeecccccccCccccCceeeeeeeeeeccccccccceeecccCCceeecCCCcccceeEeeeeCCeEEEEecceEE Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred eeeeeEEeecccccEEEEeCCCeEEEEECCCcceEEEEcccceEeecCccc-CCCCCCCceeEEEEecceEEEEeeCCCe Q lcl|Aclame:pro 87 RNDKEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKALSNWPKDK-YPQYDLGEVIDVCRNRGRYIWLQKGGER 165 (477) Q Consensus 87 ~v~~~iG~i~g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~~~~~~~~-~p~~~~~~~~dv~~~dgyfV~~~~g~~~ 165 (477) +|.+++|+|+|+|||+|+||+++++|+++|.+++|+||++++++++|+... +++++++++++|||+||||||++||+++ T Consensus 81 ~v~~~vG~iagsg~VsMa~~~~~q~v~v~g~~~~y~y~g~~~t~~~~~~~~~it~~dl~~~~~v~~~dGyfV~~~~gt~~ 160 (472) T protein:vir:10 81 KGHKPIADLAGKGRISMAFSRNSQAVVAAGKMTLYRYDGTVKTLENWPKEKKYTQYDIGNVRDMCHLRGRYVWCKDGSDI 160 (472) T ss_pred EEEeeeeeecccccEEEEecCCceEEEEecceeEEEeccchhhhhhccccccCCccccCCceeEEEeCceEEEeecCCce Confidence 999999999999999999999999999999999999999999999999655 9999999999999999999999999999 Q ss_pred EEEecccCccCcCCCccceEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhh Q lcl|Aclame:pro 166 FGVTDLEDESKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCK 245 (477) Q Consensus 166 ~~iS~L~d~s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~ 245 (477) ||||+|+|+++++....|||||++||+|||++++|++|||||++|||||+|||+++|||+.+..+||+|||+|||||+|| T Consensus 161 ~~iS~L~d~s~~~~~~~FatAE~~pD~Ivgi~~~~~~i~lfG~~TiEvw~ntG~a~fpf~r~~~~pg~~iq~Gcaa~~sv 240 (472) T protein:vir:10 161 FGVTDLEDESHPDRYRALYRAESQPDGIIGIDSWRDFIVCFGASTIEYFSLTGAADGQSAIYAAQPALMVEKGIAGTHCK 240 (472) T ss_pred EEEeecCCcccCCcccceeeecCCCCceEEEEeeccEEEEEeccceEEEEecCCCCcceeeeccCccceeeecccCchhh Confidence 99999999999876556999999999999999999999999999999999999999999988889999999999999999 Q ss_pred eecCCeEEEEecccccCcEEEEccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCCeEEEEecccc Q lcl|Aclame:pro 246 CRYQDKYAILSHQSTGQPAVYLIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPKHTLCFDGSAS 325 (477) Q Consensus 246 ~~~~~s~~wlg~d~~g~~~Vy~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~~Tw~yD~~t~ 325 (477) |++++++||||||++|+++||+++||||||||||+||++|++|+..|++.|+|||||||||+||+||||+||||||++|+ T Consensus 241 ~~~~~s~~~l~~d~~g~~~V~~~~g~q~~rIST~aIE~~i~~y~~~e~~dA~~~s~~~eGH~fy~LtfP~~Tw~yD~at~ 320 (472) T protein:vir:10 241 TRLGDAHVIISHQATGAPSVFLINQAQATSIATATIEKILRSYTHDELASAVMETVRFDSHELVLIHLSRQVLCYDAAAN 320 (472) T ss_pred hhhCceEEEEecCCCcceEEEEccCceEEEecCHHHHHHHHhCCcccccceeEEEEEeCCeEEEEEEcCCeeEEEeccCC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CcceeeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEeeceeccCCceEEEEEEEEEe Q lcl|Aclame:pro 326 HQYSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIKADNARLFDFELEAST 405 (477) Q Consensus 326 ~Wher~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~tP~~~~~~~R~~~~ele~~~ 405 (477) +|||||++++++++|||||++|||+++|||+|||++||.||+||++.++|+|+|++|++++|+++++|+|+|++|||+.| T Consensus 321 ~~~~~w~~~~~g~~~~~~Ra~~~~~~~g~~~vGD~~ng~l~~ld~~~~td~g~pi~~~~~tp~~~~~n~Rvfd~el~~~t 400 (472) T protein:vir:10 321 QNGLQWSLLKTGFYHAPYRGIDFMFADHHLTCGDKNDSLLGQLDFASSAQYEKPQEHVLYTPLFKADNARVFDFELEAST 400 (472) T ss_pred ccceeeeeeecCCccCceEEEEEEEeCCeEEEEEcCCCeEEEEcCcCcCCCCceeEEEeeccceecCCCeEEEEEEEeeC Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999 Q ss_pred CCCCCCceEEEEeeeCccccCcceEeccCCCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 406 GVAQIADKLFLSVTTDGINYSREQLIEQNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 406 Gvgq~~~~v~l~~SdDG~tws~~~~~~~g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |+++.+++|||||||||.+++++++++++.++.|++|++||||||+|+|||||||+++++||++++++|+|| T Consensus 401 Gvg~~~~~v~L~wSddg~~~~~~~~~~~~g~~~~~~r~~w~RlG~ar~~vgf~~rv~~s~pv~~~~~~a~~e 472 (472) T protein:vir:10 401 GVAHIADRLFLSATADGLHFGREQMINQNAPFAYDRRILWRRMGRVRKNLGFKVRVITSSPVTLSGCQIRME 472 (472) T ss_pred CcCccCceEEEEEeccccccchhHHHhhcCccchhheeeeheeeccccccceEEEEEEecccccccceeeeC Confidence 999999999999999988777778999999999999999999999999999999999999999999999999 No 8 >protein:vir:108312 Length: 458 # NCBI annotation: hypothetical protein # Family: family:all:1540 # MgeID: mge:2007 # MgeName: BA3 # Cross-refs: genbank:acc:YP_001552278;genbank:gi:160700603;genbank:GeneID:5758828 Probab=100.00 E-value=1.9e-188 Score=1049.72 Aligned_cols=440 Identities=21% Similarity=0.284 Sum_probs=409.3 Q ss_pred cceeceeeccccccccccccee-eeeecccccccccccccccccccccCcceeeccc-hheeeEEEeecCCeEEEEECCe Q lcl|Aclame:pro 7 MPKIQIPLAKGLVKDIKTADYI-DALPVNMLATPKEVLNASGYLRSFPGIEKKQDAK-GVSRGVHFNTKNNALYRVCGNT 84 (477) Q Consensus 7 M~~~~iPl~~G~~~~~~~~d~i-~~~pvNl~~~~~e~~~s~~~L~~~PGl~~~~~~~-g~~rG~~~~~~~g~ly~V~G~~ 84 (477) |++||||+ |+|.++ ...+ +++||||||+++|++||+++|++||||+++++++ +++||+| ..+|+||+|+|++ T Consensus 1 m~~~~ip~--gsy~a~--~~~~daq~~VN~yp~~~e~g~ss~~l~~tPGl~~f~~~~~~~~~g~~--~~~g~ly~v~g~~ 74 (458) T protein:vir:10 1 MVQRQIPL--VATTAE--GDVSGQEILVNVYPRKSDGGKYPFTLRHTPGLAFFCELPTFPVMAMH--QNGSRAFAVTPRD 74 (458) T ss_pred Cceeeece--eeeecc--cccccceeeeeeeeecccccccccceEecCCceeeecCCCCceeeEE--ecCCEEEEeeCce Confidence 99999997 556642 3344 5699999999999999999999999999999995 5678987 4689999999999 Q ss_pred eEeee-----eeEEeecccccEEEEeCCCeEEEEECCCcceEEEEcccceEeecCcccCCCCCCCceeEEEEecceEEEE Q lcl|Aclame:pro 85 LYRND-----KEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKALSNWPKDKYPQYDLGEVIDVCRNRGRYIWL 159 (477) Q Consensus 85 Ly~v~-----~~iG~i~g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~~~~~~~~~p~~~~~~~~dv~~~dgyfV~~ 159 (477) ||+|+ +++|+|+|+|||+|+||++ ++++++|. ++|+||++++++.+++++.+++ +++|||+||||||+ T Consensus 75 LY~V~~~~~~~~iG~i~gsg~VsMa~ng~-q~vi~~G~-~gY~yd~at~~~~~i~d~~~~~-----~~~v~~~dGy~V~~ 147 (458) T protein:vir:10 75 MYEISKDGTYKRLGSVDFKGRVVMEDNGK-QIVMVDGE-KGYYYDSETEIVQEIKAEGFYP-----ASTVTYQDGYFIFD 147 (458) T ss_pred EEEEeCCceEEEEecccCceeEEEeeCCc-EEEEEECC-eEEEEeecccEEEeccCccccC-----cceEEEeCcEEEEE Confidence 99975 6999999999999999997 56777887 8999999999999999887765 56999999999999 Q ss_pred eeCCCeEEEecccCccCcCCCccceEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeec Q lcl|Aclame:pro 160 QKGGERFGVTDLEDESKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGI 239 (477) Q Consensus 160 ~~g~~~~~iS~L~d~s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gc 239 (477) +||+++||||+|+|+++ ++|+|||||++||+|||++++|++|||||++|||||+|||+++|| |+|+||+|||+|| T Consensus 148 ~~g~~~~~is~L~d~s~--d~l~fa~Ae~~pD~iv~i~~~~~~i~~fG~~TiEvw~ntG~a~fp---y~r~~ga~i~~Gc 222 (458) T protein:vir:10 148 RKGTGQFFISELLDVAF--DPLDFATAEGQPDPLLAVLSDHREVFMFGQETIEVWYNSGAADFP---FERNQGAFIEKGI 222 (458) T ss_pred eeCCCEEEEEecCccee--CcceeeeecCCCCceEEEEeeccEEEEEeccceEEEEecCCCCcc---eeecccceeeecc Confidence 99999999999999864 479999999999999999999999999999999999999999999 7899999999999 Q ss_pred ccchhheecCCeEEEEecccccCcEEEEccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcC--CeE Q lcl|Aclame:pro 240 AGRDCKCRYQDKYAILSHQSTGQPAVYLIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLP--KHT 317 (477) Q Consensus 240 aa~~s~~~~~~s~~wlg~d~~g~~~Vy~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP--~~T 317 (477) |||+|||++++++|||||| ++||+++||||+|||||+||++|++| +.++ |+|+|||+|||+||+|||| ++| T Consensus 223 aa~~sv~~~~~t~~~l~~d----~~Vy~l~g~~~~rIST~aIE~~i~sy-~~~d--a~a~t~~~eGH~fy~LtfP~a~~T 295 (458) T protein:vir:10 223 GAPYSVAKTNNTVYFIGSD----LMIYQITGYTPVRISTHAVEQTLKGV-NLSD--AFAYTYQSEGHLFYVLTIPGKNLT 295 (458) T ss_pred cCcchhhhhCceEEEEcCC----eEEEEecCceeEEeeCHHHHHHHhcC-Chhh--eEEEEEEecCeEEEEEECCCCCce Confidence 9999999999999999998 78999999999999999999999999 4444 6778999999999999999 589 Q ss_pred EEEeccccCcceeeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEeeceeccCCceEE Q lcl|Aclame:pro 318 LCFDGSASHQYSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIKADNARLF 397 (477) Q Consensus 318 w~yD~~t~~Wher~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~tP~~~~~~~R~~ 397 (477) ||||++|++||||+++ .++|||++|||+++|||+|||++||+||+||+++++|+|+|++|++++|++|++++|++ T Consensus 296 w~yD~~t~~Wher~Sg-----~~~~~Ra~~~v~~~g~~~vGD~~ng~ly~ld~~~~td~g~~i~~~~~~p~~~~~~~rl~ 370 (458) T protein:vir:10 296 WCYDISSGSWHVRQSY-----QFDRHVSNNSIYFDQKTLVGDFQNGRIYIMADNYYTDDGDPVVREFILPVVNNGREFLT 370 (458) T ss_pred eEEecccccceeeccC-----CCCceEEEEEEEeCCeEEEEEcCCCeEEEEcccCcCCCCceeeeeeeccceeCCCCeEE Confidence 9999999999999865 57799999999999999999999999999999999999999999999999999999976 Q ss_pred --EEEEEEEeCCCCC-----CceEEEEeeeC-ccccCcceEe-ccCCCceeceeEEEEEeeeccceeeEEEEEEeeCCee Q lcl|Aclame:pro 398 --DFELEASTGVAQI-----ADKLFLSVTTD-GINYSREQLI-EQNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVT 468 (477) Q Consensus 398 --~~ele~~~Gvgq~-----~~~v~l~~SdD-G~tws~~~~~-~~g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~ 468 (477) ++|||++|||||+ +|.+||+|||| |.|||+++++ ++|++|||+||++||||||+|+|| ||+||++|+|+. T Consensus 371 ~~~~el~~~tGvg~~~~~~~~p~~~l~~S~d~g~~~s~~~~~~~lg~~gey~tr~~~~rlG~ar~rv-f~v~~s~p~~~~ 449 (458) T protein:vir:10 371 VDSLELDLSSGVGLTVGQGSDPELRVYFSKDNGNEYSQNFKVGKIGRKGEFLTRAKVNRFGCARQFT-FKVEISDPIPVD 449 (458) T ss_pred EEEEEEEEecceeeeeCCCCCceEEEEEeeCCCcccchhHHHhhcCCcchhhhhhhhhhhccCcceE-EEEEEecchhhc Confidence 8999999999864 57899999999 9999999999 789999999999999999999999 999999999999 Q ss_pred EEEEEEEeC Q lcl|Aclame:pro 469 LSDLSIRME 477 (477) Q Consensus 469 l~~~~~~~E 477 (477) |++||+||. T Consensus 450 l~ga~~~~r 458 (458) T protein:vir:10 450 IGGAWVEVR 458 (458) T ss_pred ceeeeEEeC Confidence 999999999 No 9 >protein:vir:8837 Length: 513 # NCBI annotation: constituent protein # Family: family:all:4957 # MgeID: mge:158 # MgeName: PaP3 # Cross-refs: genbank:acc:NP_775245;genbank:gi:27476043;genbank:GeneID:2700591 Probab=99.94 E-value=6.2e-26 Score=158.77 Aligned_cols=438 Identities=13% Similarity=0.109 Sum_probs=263.1 Q ss_pred cceeceeecccccccccccceee-eeecccccccccccccccccccccCcceee-ccchheeeEE-EeecCCeEEEEECC Q lcl|Aclame:pro 7 MPKIQIPLAKGLVKDIKTADYID-ALPVNMLATPKEVLNASGYLRSFPGIEKKQ-DAKGVSRGVH-FNTKNNALYRVCGN 83 (477) Q Consensus 7 M~~~~iPl~~G~~~~~~~~d~i~-~~pvNl~~~~~e~~~s~~~L~~~PGl~~~~-~~~g~~rG~~-~~~~~g~ly~V~G~ 83 (477) |+..+.=++. +.. --.|+.- -+|.|..-....+.-..+.+.+.||+.+++ +++.+++|+. |...++....++++ T Consensus 1 ~~~~~~~~~~-~~g--~~~d~~p~~lp~~a~s~~~N~~~~~~~~~~~~g~~pv~a~~~~~~~g~~~~~~~g~~~~~~~~~ 77 (513) T protein:vir:88 1 MALERQEVKN-PTG--IVTDIAPADLPLDKWSFGNNVRFKNGKAQKALGHSPIFDTAQAPILDMFPFIRNNIPYWLLCSE 77 (513) T ss_pred CCcCChhhcc-ccc--ceeccChhhcCCCcceeeeeeeEecceeeecCccceeeecCCCCceeeeeeecCCCeEEEEeec Confidence 5555544431 111 1112221 145555544455555567778999999994 5777888876 44455666677888 Q ss_pred eeEeeee--eEEeeccc-------ccEEEEeCCCeEEEEECCCcceEEEEcccceEeecCcccCCCCCCCceeEEEEecc Q lcl|Aclame:pro 84 TLYRNDK--EVADIAGM-------SRVSMSHSSHSQAICFEGKVKLYRYDGTEKALSNWPKDKYPQYDLGEVIDVCRNRG 154 (477) Q Consensus 84 ~Ly~v~~--~iG~i~g~-------g~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~~~~~~~~~p~~~~~~~~dv~~~dg 154 (477) |+|.... ...+|++. .+.+++-=+ ..+++++|.-+-.++|.++.++..++ +.|. ...++.+....+ T Consensus 78 ~~~~~~~~~t~~dvs~~~~~~~~~~~w~~~~f~-~~i~a~ng~~~~q~~~~~s~~f~dl~--g~p~--~~~a~~i~v~~~ 152 (513) T protein:vir:88 78 KRLYLADGTTIIDVSPGPYSASVTNRWSVGSFN-GVIFANDGVNPPHHLPPTESVFRVLP--NFPA--NTTFRRLKSFKN 152 (513) T ss_pred eEEEEecCceeeeccccceeecccCceeeeeec-CEEEEEcCCCcceEEcCCCceeeecc--CCCc--ccceEEEEEEee Confidence 8875432 34455442 244555433 35677788877788998877777665 2332 335666666777 Q ss_pred eEEEEeeC-------CCeEEEecccCc----cCcCCCccceEEe-------ecCCceEEEEeeCCEEEEEecceEEEEEe Q lcl|Aclame:pro 155 RYIWLQKG-------GERFGVTDLEDE----SKPDRYQPFYRAE-------SQPDGIVSVDAWRDLIVCFGSSSIEYFTL 216 (477) Q Consensus 155 yfV~~~~g-------~~~~~iS~L~d~----s~~~~~l~fatAE-------~~pD~iv~v~~~~~~l~lfG~~TtEvw~~ 216 (477) +. |.... -++.++|+++|+ ++|+.+. .|.+ ...+.||+.++.++.+++|-+++|=.+.- T Consensus 153 fl-v~~~~t~~~~~~PnrV~wS~~~D~~~~P~~W~~t~--~t~~a~~~~l~d~~g~~v~g~~~g~~liif~e~~i~~m~y 229 (513) T protein:vir:88 153 FL-IGLNVTSNSIEMPQMVWWSTSADAGGVPASWDPTD--PTKDAGQNTLADTNGAIVDGVKLRDSFIIYKEDSVYSMRY 229 (513) T ss_pred EE-EEeecccCcCCCCceEEEecccCCccccccccccc--ccCcccccccCCCccceeeeeecccceEEEecccEEEEEe Confidence 64 44322 257999999996 6675432 2222 23478999999999999999999966655 Q ss_pred cCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEEEEccCceeeecCCHHHHHHH-HhcCccccce Q lcl|Aclame:pro 217 TGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVYLIGAGEKNKISTATIDKII-RYYSADELAA 295 (477) Q Consensus 217 tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy~~~g~q~~rISt~~IE~~i-~~y~~~e~a~ 295 (477) +| .+..|.+.++. =..||.+|.|++++++.+||||++ + ||+.+|.++|+|+...|++.+ .+........ T Consensus 230 ~g-~~~if~~~~i~----~~~G~~~p~SI~~~~~~~ffls~~---G--f~~~~G~~~~~Ig~ekVdk~f~~~~n~~~~~~ 299 (513) T protein:vir:88 230 IG-GLYIFQFQQLF----NDVGILGPNCAIEFDGNHFVVGHG---D--VYVHNGVQKQSVIDAQVRKFFFSDINPDNYQR 299 (513) T ss_pred cC-CCceEEEEeec----ccccccCCceeEEECCeEEEEeCC---c--eEEecCceeeecccchhhhhhhccCCcccceE Confidence 54 46676655543 367999999999999999999986 2 688899999999998899977 3322222222 Q ss_pred eEEEEEEECCEEEEEEEcC----------CeEEEEeccccCcceee----EEecCC----Ccccce-------EEEEE-- Q lcl|Aclame:pro 296 SFMESIRFDNHELLLLHLP----------KHTLCFDGSASHQYSQW----SLLKSG----FYDEPY-------RAIDF-- 348 (477) Q Consensus 296 a~a~s~~~~GH~fyvitfP----------~~Tw~yD~~t~~Wher~----s~~~~~----~~~~r~-------Ra~~~-- 348 (477) .++ .+....|+ +++.+| ++.++||-.+++|.-+. .+...+ ....-| -.... T Consensus 300 ~~~-~~d~~~~~-v~~~y~s~~~~~~~~~~~~lVYd~~~~~Ws~~~~p~~~~g~~g~~~~~~~~~~~~~~~~~d~~~~~~ 377 (513) T protein:vir:88 300 TFV-LADHVNTE-MWVCYSSTRSEPGKHCDRAIIWNWKENTWSIRDLPNVLSGAYGIIDPKTSNLWDDDSNPWDTDTSVW 377 (513) T ss_pred EEE-EEcCcccE-EEEEecCCCCCCCcccceEEEEEccCCeEEEEeccchhhcccccccccccceecccccccccchhhh Confidence 222 23334444 566666 24599999999995332 000000 000001 00001 Q ss_pred -----EEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEeeceec-cCCceEEEEE--EEEEeCCCCCCceEEEEe-- Q lcl|Aclame:pro 349 -----MFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIK-ADNARLFDFE--LEASTGVAQIADKLFLSV-- 418 (477) Q Consensus 349 -----~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~tP~~~-~~~~R~~~~e--le~~~Gvgq~~~~v~l~~-- 418 (477) .......+.++++.|.++..+.+ .+-.|.+++-...+|-+. +++.++..+. +...++-+. -.+-|.. T Consensus 378 ~~~~~~~~~~sl~~~~~~~~~~~~fd~~-~~f~G~~lea~~~t~~~~~~~~~~~~~i~~v~~~~t~~g~--~t~~vg~~~ 454 (513) T protein:vir:88 378 GEGSYNPAKSSMIFTSFQDAKLFLFGET-STFSGQSFTSTLERSDIYLGDDRMMKTVSAVIPHITGNGV--CNIWVGNAQ 454 (513) T ss_pred hccccccccceeEeeeccCCceeeeccc-ccccCCceEEEEEecCccccCchhheeeeeeeeeeecceE--EEEEEeeec Confidence 11113456677788889888866 467999999877776544 5555542211 111222111 1112222 Q ss_pred eeC-ccccCcceEeccCCCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 419 TTD-GINYSREQLIEQNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 419 SdD-G~tws~~~~~~~g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) ..+ -.+|+.+.......-| .+..|+-||-- -||+|+....+-.++|..+++- T Consensus 455 ~~~~~~~~s~~~~~~~~~~~----~~~~r~~gRy~---~~ri~i~~~~~w~~~G~~ve~~ 507 (513) T protein:vir:88 455 VQGSGIRWKGPYPYRIGQDY----KIDTKHVGRYI---ALKFDFASAGDWYFNGYTLEMA 507 (513) T ss_pred cCccccccccceeeecccCc----eEEeccCCceE---EEEEEccCCCceEEeeEEEEEe Confidence 233 6688877555543333 34555555331 2677777777778888777776 No 10 >protein:vir:3133 Length: 911 # NCBI annotation: hypothetical protein # Family: family:all:5234 # MgeID: mge:64 # MgeName: VpV262 # Cross-refs: genbank:acc:NP_640315;genbank:gi:21234408;genbank:GeneID:956056 Probab=99.13 E-value=5.4e-10 Score=71.41 Aligned_cols=431 Identities=14% Similarity=0.135 Sum_probs=183.9 Q ss_pred Cchhhccceeceeeccc-------------------------ccccccccceeeeeecccccccccccccccccccc--- Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKG-------------------------LVKDIKTADYIDALPVNMLATPKEVLNASGYLRSF--- 52 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G-------------------------~~~~~~~~d~i~~~pvNl~~~~~e~~~s~~~L~~~--- 52 (477) --||.. -|-..| +.|+++-++.+-.-||..|=.++...-|-..|..- T Consensus 178 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (911) T protein:vir:31 178 RTRELL-----TPYTTGTNYGDTLTPEEEWNLYNSGWATITRATKDKSGSGTVYVNPVQYYFDKRGVYPSHSVLYNSMKQ 252 (911) T ss_pred eehhhc-----cccccccccCcccCchhhcccccccceeeeeecccCCccceEEEchhheeecccCcCcchhhhhhhhhh Confidence 111211 122222 22332222222111222222222221111111100 Q ss_pred ---------cCcceeec----c--chheee--E---EEeecCCeEEEEECCeeEeeeeeEEeecccccEEEEeCCCeEEE Q lcl|Aclame:pro 53 ---------PGIEKKQD----A--KGVSRG--V---HFNTKNNALYRVCGNTLYRNDKEVADIAGMSRVSMSHSSHSQAI 112 (477) Q Consensus 53 ---------PGl~~~~~----~--~g~~rG--~---~~~~~~g~ly~V~G~~Ly~v~~~iG~i~g~g~Vsma~N~~~~~I 112 (477) -=..+|++ . .-|-.| + +|-.+--.|---+|+- .-.+.-|+..|+||--=..+. -| T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~e~~n---p~ 327 (911) T protein:vir:31 253 ESAKEIVALNVFSPWADEKINFGTTTPPLGRYIHSAYYFDSAAILSLGIGNL--TPPTSDGTTEGSGPAEEEISN---PI 327 (911) T ss_pred hccceeEEEeeeccccccccccccCCCchhhhhhhheeeccceeeeeccccc--CCCCCCCccCCCCCchhhhcC---CC Confidence 00001111 0 011111 1 1111111010001110 000223444555553221111 01 Q ss_pred EECCCcceEEEEc-ccceEeecCcccCCCCCCCceeEEEEecceEEEEee----CCCeEEEecccCccCcCCCccc---- Q lcl|Aclame:pro 113 CFEGKVKLYRYDG-TEKALSNWPKDKYPQYDLGEVIDVCRNRGRYIWLQK----GGERFGVTDLEDESKPDRYQPF---- 183 (477) Q Consensus 113 v~~g~~~~y~yd~-~~~~~~~~~~~~~p~~~~~~~~dv~~~dgyfV~~~~----g~~~~~iS~L~d~s~~~~~l~f---- 183 (477) ..|+-.+.+-++. +.+++ .|+-.. ..+.+.+..|| ||--+ |..++..|.|.+-..... -.| T Consensus 328 gl~~igt~~n~k~~a~~~~-~~~~~~-------r~r~~~~yaGR-VfyaD~dkngk~rIlFSqLv~sl~di~-nCYQdaD 397 (911) T protein:vir:31 328 GLDNIGTVNNLKLIAEGTV-RWTVKD-------RPRCSGYHNGH-VYFGDRDKNGKTRILVSQLVNSLDNIP-KCFQDAD 397 (911) T ss_pred Ccccccchhceeeeeccce-eeeecc-------cccceeeeccE-EEEeeeccCcceeEEEEeecccccccc-ccccCCC Confidence 1122112121211 22222 222111 12456677777 34332 233677787776432211 111 Q ss_pred eEEeecCC---------------ceEEEEeeCCEEEEEecceEEEEEecCCCCCc-----eeeEEecccceEeeecccch Q lcl|Aclame:pro 184 YRAESQPD---------------GIVSVDAWRDLIVCFGSSSIEYFTLTGSADTS-----QPLYIHQAAYMIQAGIAGRD 243 (477) Q Consensus 184 atAE~~pD---------------~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~-----f~~~~~~~~~~i~~Gcaa~~ 243 (477) .|||..|| +|+.++.++.-|.+|++.++ |...|.++.- |.+-++. ++||++|. T Consensus 398 PTSeee~DLIdTDGg~vri~gah~Ii~LV~~G~sLlVFcaNGV--WAI~G~d~~g~TATdy~ItKIs-----dvGcsspN 470 (911) T protein:vir:31 398 PTAEEINDLIATDGFTMYPVGMGAPITMVEFNKRLLLLCTNGV--WAIRGTSGGGATATDFTLDKVA-----SVEFNSPQ 470 (911) T ss_pred ccccccchhhhcCCcEEecCCCCCceEEEEecCeEEEEEeCcE--EEEeccCCCceeeeeeEEEEEe-----eeeeCCCC Confidence 34555554 79999999999999999998 9997776543 4443432 46999999 Q ss_pred hheecCCeEEEEecccccCcEEEEccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCC-------- Q lcl|Aclame:pro 244 CKCRYQDKYAILSHQSTGQPAVYLIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPK-------- 315 (477) Q Consensus 244 s~~~~~~s~~wlg~d~~g~~~Vy~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~-------- 315 (477) |+..+|+.++|+|++---+..+.+++-+.+|-++...|++-+.+.++...+.+-++-...|+. |++.+|| T Consensus 471 SVVvVgn~i~fWSd~GIyaLganqfnD~tAnNLTesTIQ~y~d~I~~dkIkNVtgtyd~de~r--VyW~yPn~lDe~tey 548 (911) T protein:vir:31 471 SVVDIGTAIVFWSERGIIAIGVNDFGDLTSNNLTENTIDEYYDSLDRDIIKNVKGTFINDENR--VYWVVPNKQDSNGEY 548 (911) T ss_pred eEEEecCceEEeeCCcEEEEeecccCccccccccHHHHHHHHhhcChhhhceEEEEEEccCCE--EEEEecCccCCccce Confidence 999999999999999776667777778888888878899999999988877766644445666 7788884 Q ss_pred -----eEEEEeccccCcceeeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEeeceec Q lcl|Aclame:pro 316 -----HTLCFDGSASHQYSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIK 390 (477) Q Consensus 316 -----~Tw~yD~~t~~Wher~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~tP~~~ 390 (477) +.++||..++.|. -|+.-.+-..+-++|.-.-..+.-+. -|- .++|-.|.--...|+.. T Consensus 549 kt~~~~ILVfdLatgaFY-Pwtvs~gpLl~~p~y~Lv~TreEvtv--------Pi~-------~etgaiIve~gsdPV~~ 612 (911) T protein:vir:31 549 KTDGELVLVLNLDTGGFY-KHTVSGGPLLHAPFRRLVNTRAEVSI--------PIT-------ETDGTVITDTLGDPVTV 612 (911) T ss_pred eecCceEEEEEeccCccc-ceeeecceeeccccccccccccccee--------eEE-------eecceEEEecCCCCeEE Confidence 3599999999999 46553222222222211100000000 000 01111111111111110 Q ss_pred c---CCceEEEEEEEEE---eCCC-C------CCceEEEEeeeC----ccccCc---------ceEe-ccCCC---ceec Q lcl|Aclame:pro 391 A---DNARLFDFELEAS---TGVA-Q------IADKLFLSVTTD----GINYSR---------EQLI-EQNSP---FQYD 440 (477) Q Consensus 391 ~---~~~R~~~~ele~~---~Gvg-q------~~~~v~l~~SdD----G~tws~---------~~~~-~~g~~---g~~~ 440 (477) - +.-. .+-++.+. -|+. | ..|.-|++|-.= -.+|+. +.|+ ..+.| --|. T Consensus 613 tl~vdttG-vDg~ayLl~frdg~~g~~~f~a~~~~~~~~dw~~~~~~~~~~y~s~~~~~y~~~~~~~~~~~~pyi~sy~~ 691 (911) T protein:vir:31 613 TRTVTTTG-VDGLAYFASFDDGVNGQFNFIAEHQPWGFADWANVPNMTRVNYSSYVDFAYEYPEVMIGNISLPYIHSYYL 691 (911) T ss_pred EEeeeccc-ccceeEEEeeccCCcceEEEEEeecCCeeeccccCccccccchhHHHHhhhhhhhhhhhcccCceeeeeee Confidence 0 0000 01112222 1221 1 234455555430 112211 1111 11111 1233 Q ss_pred eeEEEEEeeeccceeeEEEE-EEeeCCee---EEEEEEEeC Q lcl|Aclame:pro 441 KRILWRRIGRVRKNIGFKIR-IITKSPVT---LSDLSIRME 477 (477) Q Consensus 441 ~r~~~~RlG~~~~~vgf~~r-~~~~~~v~---l~~~~~~~E 477 (477) +-++.+--|+..+-.|.+|. +..--.++ +.--+++|- T Consensus 692 ~~~rv~~~~y~~~~a~~~f~~~~~~~~~~~~~~~~~~~~~~ 732 (911) T protein:vir:31 692 TGIRVQTEQYTTETAHLSFHRVQAHQTTALGTVTFHKVDMM 732 (911) T ss_pred eeeEEeccceeeecccceeEeeecccceeeeeeeeeeeeeh Confidence 33444444444444444432 11111111 111222222 No 11 >protein:vir:352 Length: 536 # NCBI annotation: hypothetical protein # Family: family:all:3197 # MgeID: mge:9 # MgeName: Mx8 # Cross-refs: genbank:acc:NP_203466;genbank:gi:15320622;genbank:GeneID:921729 Probab=98.99 E-value=7e-09 Score=65.31 Aligned_cols=427 Identities=13% Similarity=0.069 Sum_probs=222.6 Q ss_pred Cchhhccceec------e--eecccccccccccc---eeeeeecccccccccccccccccccccCcceeec-cchheeeE Q lcl|Aclame:pro 1 MLSEVFMPKIQ------I--PLAKGLVKDIKTAD---YIDALPVNMLATPKEVLNASGYLRSFPGIEKKQD-AKGVSRGV 68 (477) Q Consensus 1 ~~~~~~M~~~~------i--Pl~~G~~~~~~~~d---~i~~~pvNl~~~~~e~~~s~~~L~~~PGl~~~~~-~~g~~rG~ 68 (477) -||..-|+.++ | |+- |.-++...++ -.+...-|++|++.. +|-.-|-.++++ +++++|=+ T Consensus 3 ~~~a~r~~~~~~~~~~~~pAPv~-G~~t~~~~A~m~~~~A~vldN~fpt~~g-------~r~R~G~~~~at~~~~~v~s~ 74 (536) T protein:vir:35 3 PLRARRVPPPPSIQEAHLPAPVG-GLNTVSAGSAMPVSDCLQGFNLIASELG-------LRSRLGYREWCTGLGVPARST 74 (536) T ss_pred ccccccCCCCccceeeeeCcccc-ceeccchhhcCCCCceEEEeecCCChhh-------hhhhccchhHhcCCccceEEe Confidence 12333333222 1 111 1111111111 111123566665443 333467788888 46677655 Q ss_pred E-E-----eecCCeEEEEECCeeEeeeee-------EEeeccccc----EEEEeC--CCeEEEEECCCcceEEEEcccce Q lcl|Aclame:pro 69 H-F-----NTKNNALYRVCGNTLYRNDKE-------VADIAGMSR----VSMSHS--SHSQAICFEGKVKLYRYDGTEKA 129 (477) Q Consensus 69 ~-~-----~~~~g~ly~V~G~~Ly~v~~~-------iG~i~g~g~----Vsma~N--~~~~~Iv~~g~~~~y~yd~~~~~ 129 (477) . | +.-+..|+.+.++.+|.++++ +-.-..+|. +...|| ++.-++.+||.-...+||+++.+ T Consensus 75 ~~~~~~~~~Ga~~klf~at~~~i~dvT~pa~p~~~~~~~g~~~g~~~~w~~v~~~~~gG~~l~~~nG~~~~~~~~gt~~~ 154 (536) T protein:vir:35 75 LPFAGSAKSGAANRLFQTTSEGIWDVSASSQTPTQVLTFGDQTGDAGFGVSHAFVTQRGHFLFYADETNGLFRYSESTDT 154 (536) T ss_pred eeeeeccccCcceeEEEecccceeeeecCCCCcceEEEeccCCCceeeEEEEEecCCCceEEEEEEcCCCceEeecccCc Confidence 4 3 234558999999999998741 111122332 444555 45567888888888999988744 Q ss_pred EeecCccc---CC-CCCCCceeEEEEecceEEEEeeCCCeEEEe------cccCccCcC-------CCccc---eEE--- Q lcl|Aclame:pro 130 LSNWPKDK---YP-QYDLGEVIDVCRNRGRYIWLQKGGERFGVT------DLEDESKPD-------RYQPF---YRA--- 186 (477) Q Consensus 130 ~~~~~~~~---~p-~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS------~L~d~s~~~-------~~l~f---atA--- 186 (477) .+..+... +. |-+-....-+|-...|..|++.++-+-+-. +...+ ++- ..|-. .+- T Consensus 155 w~~v~~~t~~~~i~Gv~~~~l~~i~~~knRLffvq~~s~~awYLp~~av~G~A~~-f~lg~~~~~GGsL~~~~sWS~~~G 233 (536) T protein:vir:35 155 WTAVAQGTGVGEIDGVNPANIVFVAVFKQRVWLVERDTARAWYLPAGAIAGTAQP-FEMGAQFRAGGHLVGLWNWTYDGG 233 (536) T ss_pred hhhcccCCcccccCCCCcccceeeeeEeeeEEEEEeCCceEEEeecccccceeee-eeccCccccCceEccceeeccccC Confidence 43222111 10 112223344666666655555444332211 11110 000 00000 011 Q ss_pred eecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeee---cccchhheecCCeEEEEecccccCc Q lcl|Aclame:pro 187 ESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAG---IAGRDCKCRYQDKYAILSHQSTGQP 263 (477) Q Consensus 187 E~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~G---caa~~s~~~~~~s~~wlg~d~~g~~ 263 (477) .+-.|.+| .+..++|++++.-+ -+++...|.+.. .-.+| =+++.+.-+++.-+++++.+ | T Consensus 234 ~Gl~d~~V-fvSs~GeVaVyqGs-------dPs~s~~Wsl~g-----iy~IG~~pp~G~r~~i~~G~Dl~iit~d----G 296 (536) T protein:vir:35 234 AGMDDSLV-AISGGGDVAIWQGT-------DPASSATFGLRG-----VWSLGGSPPAGRRIATDYGGDVLVLSRL----G 296 (536) T ss_pred CCcceeEE-EEecCCcEEEEecC-------CCCcccceeEEE-----EEEeccCCCCCceEEEeecCeeEeeecC----C Confidence 12234444 44444555555411 122222343322 22457 47889999999999999887 5 Q ss_pred EEEEccCceeeecC----CHHHHHHHHh----cCccccceeEEEEEEECCEEEEEEEcC------CeEEEEeccccCcce Q lcl|Aclame:pro 264 AVYLIGAGEKNKIS----TATIDKIIRY----YSADELAASFMESIRFDNHELLLLHLP------KHTLCFDGSASHQYS 329 (477) Q Consensus 264 ~Vy~~~g~q~~rIS----t~~IE~~i~~----y~~~e~a~a~a~s~~~~GH~fyvitfP------~~Tw~yD~~t~~Whe 329 (477) .|-+..=-|..+.| |.+||..++. ++..-+.. +..|-.+.+ +++.+| .+|+|+++.|+.|- T Consensus 297 ivplsq~~q~d~~a~~~it~~I~~~~~~~v~~~a~~~gWq--~~~~P~~n~--liV~~P~~~g~~~~~fV~N~~tgaW~- 371 (536) T protein:vir:35 297 VRPLSRLVAGEVDKDTYVTAKVSNLFSALMLTRASLPGWS--MQLHPEDNA--LLVTVPTYPGQPTEQLVMALAGRAWF- 371 (536) T ss_pred ccchhhhhhhhhhcccCCCccchhhHHHHHhhccCCCccE--EEEccCCCe--EEEEccCCCCCCceEEEeecccCcee- Confidence 55544434444443 3446665543 22222222 222333444 777887 37899999999995 Q ss_pred eeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCC------cccCCCEeeEEEeeceeccCC----c----- Q lcl|Aclame:pro 330 QWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNA------SNQYEQQTEHLLYTPMIKADN----A----- 394 (477) Q Consensus 330 r~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~------~td~G~~i~~~~~tP~~~~~~----~----- 394 (477) |. ..|-+.|+..++++.+.|.- +|++|+.|-.. ....|+||.+...... +.-+ + T Consensus 372 ~f---------tgw~a~C~~v~~~~LyFG~~-dG~v~~~da~v~g~D~~~~~ag~~I~~~~~~af-~~~G~~~~K~~~~~ 440 (536) T protein:vir:35 372 RY---------RDLPIYSSAVWGGKLYFGTV-DGRVCVNDGYVDGVLLSEPSAFTPVQWSLLSAF-TNLGSARQKQVQLL 440 (536) T ss_pred ee---------cCCcceEEEEecCeEEEeec-CCEEEecccccCccccccCcCcceeeeccccch-hhcCchHHHHHHHh Confidence 33 24889999999999999987 99999977422 2335777765543332 1112 0 Q ss_pred e-------------E-EEEEEEEEeCCCCCCceEEEEeeeCccccCcceEe--ccCCCceeceeEEEEEeeeccceeeEE Q lcl|Aclame:pro 395 R-------------L-FDFELEASTGVAQIADKLFLSVTTDGINYSREQLI--EQNSPFQYDKRILWRRIGRVRKNIGFK 458 (477) Q Consensus 395 R-------------~-~~~ele~~~Gvgq~~~~v~l~~SdDG~tws~~~~~--~~g~~g~~~~r~~~~RlG~~~~~vgf~ 458 (477) | + .+++++.. .. .|-.-+ +..+.+|....+= ... ++|.-|=.|+-++..--.+..+ T Consensus 441 r~~~~s~~~~p~l~l~~~~d~D~~--~p--~~~~~~--~~~~~~Wd~s~Wd~~~Ws--~~~~v~~~~~s~~g~G~~is~~ 512 (536) T protein:vir:35 441 RPTLLSESATPSYEVQARYRYDFA--EL--APVSAM--GGGSGTWDGSTWDVDVWS--GEYQASQQVRGGTGVGVDLAIA 512 (536) T ss_pred hhhhhhccCCceEEEEEEEEeccC--CC--CCcCCC--CCCcccCCcccCCceecC--CcceeEeeeeEeccceEEEEEE Confidence 1 1 12222211 11 110001 1123345444321 122 4566677777777777778888 Q ss_pred EEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 459 IRIITKSPVTLSDLSIRME 477 (477) Q Consensus 459 ~r~~~~~~v~l~~~~~~~E 477 (477) +|.+...+..+-+..+-.| T Consensus 513 ~~g~a~~~~~~~~~d~~~e 531 (536) T protein:vir:35 513 IRGTAVARTVLVGIDILFT 531 (536) T ss_pred EeeccccceEEEEEEEEEe Confidence 9988888888888888888 No 12 >protein:vir:2625 Length: 715 # NCBI annotation: gp27 # Family: family:all:5234 # MgeID: mge:55 # MgeName: SIO1 # Cross-refs: genbank:acc:NP_064766;genbank:gi:9964636;genbank:GeneID:1263056 Probab=98.72 E-value=8.3e-08 Score=59.41 Aligned_cols=425 Identities=12% Similarity=0.108 Sum_probs=182.7 Q ss_pred Cchhhccceeceeecccccccccccc-eeeeeecccccccccccccccccccccCcceeeccchheeeEEEeecCCeEEE Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVKDIKTAD-YIDALPVNMLATPKEVLNASGYLRSFPGIEKKQDAKGVSRGVHFNTKNNALYR 79 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~~~~~~d-~i~~~pvNl~~~~~e~~~s~~~L~~~PGl~~~~~~~g~~rG~~~~~~~g~ly~ 79 (477) .+||.-.--+-.|+-.|.--. .+.+ .-|++--|+|-+---.++-+.++- +|+ -++ +|- T Consensus 168 l~r~r~f~~qg~d~~~g~~y~-~~gt~~tn~~iynlyN~gw~~p~gt~~~N-~~~--------~yi-----------Vyp 226 (715) T protein:vir:26 168 SFKERDFEWQGSDVDVTSLYF-GEGTSVSNQRIYDTYNVGWVGPKGSAALN-TYG--------SYI-----------VYP 226 (715) T ss_pred EEEeeeheeeccccccccccc-cCCcccCchhheecccceeecceeEEEEc-CCC--------Cce-----------Eec Confidence 223321111222332221110 1111 112222233311111110001110 011 000 000 Q ss_pred EECCeeE-eeeeeEEeecccccEEEEeC-CCeEEEEECCCcceEEEEcccceE----eecCcccCCCCCCCceeEEEEec Q lcl|Aclame:pro 80 VCGNTLY-RNDKEVADIAGMSRVSMSHS-SHSQAICFEGKVKLYRYDGTEKAL----SNWPKDKYPQYDLGEVIDVCRNR 153 (477) Q Consensus 80 V~G~~Ly-~v~~~iG~i~g~g~Vsma~N-~~~~~Iv~~g~~~~y~yd~~~~~~----~~~~~~~~p~~~~~~~~dv~~~d 153 (477) +.+-+| +.+.+-+..+--+-+ ..| ++. ....|. |..|..++.- +.+....|| +||... T Consensus 227 -a~s~~~~S~kd~n~afsk~ad~--ei~tGt~--~~~~G~---yi~D~~~~g~~~leeev~k~R~r--------sv~~ya 290 (715) T protein:vir:26 227 -ALTHPWYSGKDANGAFNKADWL--EIYTGSS--LASNGH---YVLDVFNKARTGLTTEVETGRFR--------SVAAYA 290 (715) T ss_pred -ccccccCCCcccccccChhhcc--ccccccc--cccCce---EEEeeeecCCccchhhhhcCCCc--------ceeeec Confidence 111111 111111100000000 000 000 001111 2223322211 122233444 699999 Q ss_pred ceEEEE----eeCCCeEEEecccCccCcCCCccc----eEEeecC---------------CceEEEEeeCCEEEEEecce Q lcl|Aclame:pro 154 GRYIWL----QKGGERFGVTDLEDESKPDRYQPF----YRAESQP---------------DGIVSVDAWRDLIVCFGSSS 210 (477) Q Consensus 154 gyfV~~----~~g~~~~~iS~L~d~s~~~~~l~f----atAE~~p---------------D~iv~v~~~~~~l~lfG~~T 210 (477) |+-.+- -+++.++..|.|.+-..... --| .|+|.-| -+|+.+..++..|++|+++. T Consensus 291 GrV~yagiD~dkng~rilfSqLv~s~~di~-nCyQd~DPTsee~~dLidTDGg~iri~gah~ii~Lv~f~~sLlvf~~NG 369 (715) T protein:vir:26 291 GRVFYAGIDSAKNGGKVYFSRLTERMSDVG-NCYQVNDPTSEVLSDLLDTDGGVVRIPDAHNIRKLHVLGASLLVFAENG 369 (715) T ss_pred ceEEEeecccccCCCeEEEehhhcchhhcc-cccccCCCchhhhhhhhhcCCCEEEecCCCCceeEEEecceEEEEEecc Confidence 994332 24566888898887432211 111 4556555 36899999999999999999 Q ss_pred EEEEEe----cCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEEEE-ccCceeeecCCHHHHHHH Q lcl|Aclame:pro 211 IEYFTL----TGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVYL-IGAGEKNKISTATIDKII 285 (477) Q Consensus 211 tEvw~~----tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy~-~~g~q~~rISt~~IE~~i 285 (477) + |.. .|.+...|++-++. ++||.+|.|+..+|+.++|.|.+.-.+..+.. ++-+.+|-|+...||+.+ T Consensus 370 V--WAi~G~d~g~tATdY~ltKIs-----~vg~sspnSvVvv~~~i~~WsdtGIyal~~Nd~fn~~tAqNLTekTIq~~~ 442 (715) T protein:vir:26 370 V--WAVAGVDNVFRATEYAITRIS-----DVGLSNENSFVVADGIPIWWGKTGIYAVQQSENLNTPTAQNLSLSTIQTLW 442 (715) T ss_pred e--EEEeccCCceeeeeeEEEEee-----eeccCCCccEEEecceEEEeeCCcEEEEEeccccCcchhhccchHHHHHHH Confidence 8 999 55555566655543 58999999999999999999999777777777 788899999999999999 Q ss_pred HhcCccccceeEEEEE-EECCEEEEEEEcCC-e---------EEEEeccccCcceeeEEecCCCcccc------------ Q lcl|Aclame:pro 286 RYYSADELAASFMESI-RFDNHELLLLHLPK-H---------TLCFDGSASHQYSQWSLLKSGFYDEP------------ 342 (477) Q Consensus 286 ~~y~~~e~a~a~a~s~-~~~GH~fyvitfP~-~---------Tw~yD~~t~~Wher~s~~~~~~~~~r------------ 342 (477) ++.++.-.+ .+.-.| ..|++ +++.+|| . .+|+|.+++..++ |.+-.+-+...- T Consensus 443 ~~I~~dk~k-nVtg~fd~~e~r--VyW~yPn~dt~vdykyd~vLV~dLalgaFYp-~~v~~~a~~~~~~ig~~~~~~~~~ 518 (715) T protein:vir:26 443 NNISNAKKA-QVTVEYDKINQR--VFWFYPDNDESVDYKYNNILVMDLALQAFYP-WRVEDEASSTSYIIGTSYYGGLGS 518 (715) T ss_pred hhcchhhhc-ceEEEEEccCCE--EEEEEcCCceeeceeecCeEEEEeccccccc-ccccccccccceeeeeeeeCCccc Confidence 999854444 343223 33677 6777884 2 3889999998875 544322111100 Q ss_pred ------eEEEEEEEeCCeE----------EEEEc------CCCeEEEEcCCCcccCCCEeeEE-Eeece-------eccC Q lcl|Aclame:pro 343 ------YRAIDFMFFDNQI----------TVGDK------KEGVLGHLIFNASNQYEQQTEHL-LYTPM-------IKAD 392 (477) Q Consensus 343 ------~Ra~~~~~~~g~~----------~vGD~------~~g~l~~Ld~~~~td~G~~i~~~-~~tP~-------~~~~ 392 (477) -.+...+..+|.. +.||. ..|.-+++++..++++- -+.|- ...|- +-.| T Consensus 519 ~~t~~~vv~~~~v~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~dw~s~d~~~~~~~gy~~~gd 597 (715) T protein:vir:26 519 TSTETQVVNGADVVVNGSDNVVATLYRDYLEGDSEIKLLVRDGTTGKMTFATFRGDT-YLDWGSADYKSFAEAGYDFMGD 597 (715) T ss_pred ccchhheeccceEEEeccceEEEEeecccccccceEEEEEEcCCceeEEEecccCce-eeeccccchhhHHHhhhhhccc Confidence 0111111111111 11121 11223334444333210 00010 00110 1111 Q ss_pred CceE-------EEEE------EEEEeCCCCCCce--EE-EEe--eeCccc------cCcceEeccCCCce--e--ceeEE Q lcl|Aclame:pro 393 NARL-------FDFE------LEASTGVAQIADK--LF-LSV--TTDGIN------YSREQLIEQNSPFQ--Y--DKRIL 444 (477) Q Consensus 393 ~~R~-------~~~e------le~~~Gvgq~~~~--v~-l~~--SdDG~t------ws~~~~~~~g~~g~--~--~~r~~ 444 (477) -+|. +++. ||-..|-.-+++- || .|| |.-+++ +.+-+.+--|..-- | +.-+. T Consensus 598 ~~~~k~~pyvt~~~~~tedg~v~~~~g~~p~n~sSclm~~sw~ws~s~st~~eaYk~~~~~~~~p~~~s~~~yp~~~VvT 677 (715) T protein:vir:26 598 ITTFKNAPYVTTYMRVTEDGYVASGAGYEFINPSSCLMSVSWNLSKSGSTPREIYKLKDVPVVNPNDLSSINYPTDTVVT 677 (715) T ss_pred ceeeecCceEEEEEEEecccceeccCCccccCCcceEEEEEeeeccCCCChhhhheecceeeeCCCccccccCCcceeEe Confidence 1121 1221 2222332122221 44 444 433332 11111111111111 1 11111 Q ss_pred EEEeeeccceeeEEEEEEeeCCee--EEEEEEEeC Q lcl|Aclame:pro 445 WRRIGRVRKNIGFKIRIITKSPVT--LSDLSIRME 477 (477) Q Consensus 445 ~~RlG~~~~~vgf~~r~~~~~~v~--l~~~~~~~E 477 (477) -.|+ |.+-|+ .|||+.+-..-. |.|-++--- T Consensus 678 Ksri-RG~Gr~-~~~rf~s~~gKdlhl~Gysilg~ 710 (715) T protein:vir:26 678 KSKV-RGRGRS-MKFRFESVAGKDFHLVGYEVIGA 710 (715) T ss_pred eeee-eccceE-EEEEEEecCCcceEEEeEEEEec Confidence 1111 122243 567776554433 333332222 No 13 >protein:vir:95475 Length: 771 # NCBI annotation: hypothetical protein ORF038 # Family: family:all:5234 # MgeID: mge:1570 # MgeName: PA11 # Cross-refs: genbank:acc:YP_001294631;genbank:gi:149408197;genbank:GeneID:5237042 Probab=98.67 E-value=1.2e-07 Score=58.44 Aligned_cols=424 Identities=14% Similarity=0.133 Sum_probs=197.8 Q ss_pred Cchhhccceece-eeccccccc--------ccccceeeeeecccc-c------------ccccccccccccccccCccee Q lcl|Aclame:pro 1 MLSEVFMPKIQI-PLAKGLVKD--------IKTADYIDALPVNML-A------------TPKEVLNASGYLRSFPGIEKK 58 (477) Q Consensus 1 ~~~~~~M~~~~i-Pl~~G~~~~--------~~~~d~i~~~pvNl~-~------------~~~e~~~s~~~L~~~PGl~~~ 58 (477) -+-+..-+++++ |-.+|.+-+ ..+.+...-...|.+ | .+..-..-+.|-+.--+|+.. T Consensus 214 ~snt~~~~iV~~y~a~~g~~pS~sd~~N~a~~k~~~~Ei~t~~~f~~~~~~~~~~Gt~~~~~G~yi~da~~~g~~~Lt~~ 293 (771) T protein:vir:95 214 HSNEPSDPIVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEI 293 (771) T ss_pred ccCCccccceEeeeccCCCCcCCceeeccccchhhccceeeecccchhhhhhcccCcccccCcceeeehhhhccccccee Confidence 555555555543 222233221 111111111111111 1 011111111232333344443 Q ss_pred eccchheeeEEEeecCCeEEEEECCeeEeeeee--EEee-cccccEEEEeCCCeEEEEECCCc-ceEEEEcccceEeecC Q lcl|Aclame:pro 59 QDAKGVSRGVHFNTKNNALYRVCGNTLYRNDKE--VADI-AGMSRVSMSHSSHSQAICFEGKV-KLYRYDGTEKALSNWP 134 (477) Q Consensus 59 ~~~~g~~rG~~~~~~~g~ly~V~G~~Ly~v~~~--iG~i-~g~g~Vsma~N~~~~~Iv~~g~~-~~y~yd~~~~~~~~~~ 134 (477) -++.|+-+-+.++. +| |=++.+. +-.| .+.|||- =+|+..+.|-.|-.. ++..| --++++. T Consensus 294 ve~~gr~~s~~~~~--------~~--l~~~~t~~~~~~vaeyagRvw-Yag~~~~~iD~dkng~~~~~~----ilfSqLv 358 (771) T protein:vir:95 294 VKLKQRYPSLSFGV--------SS--LPQDETPGGASVVCEYAGRVW-YAGFSGQIIDGDDQSPRLVSY----ILFSQLV 358 (771) T ss_pred eeccccchhhhccc--------cc--cccccCCCCceeEEeeeeeEE-EecceeEEeeccccCCceeee----Eeeehhh Confidence 33333333322111 10 1111110 0012 2455655 233333333221111 11111 1123333 Q ss_pred cccCCCCCCCceeEEEEecceEEEEeeCCCeEEEecccCccCcCCCccceEEeecCCceEEEEeeCCEEEEEecceEEEE Q lcl|Aclame:pro 135 KDKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVTDLEDESKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYF 214 (477) Q Consensus 135 ~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS~L~d~s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw 214 (477) +.- .+ .-.||+|+-= -+ =-+++|.| + |+. +-.-|+. -+|+.+..++..|++|+++.+ | T Consensus 359 ~s~------~d-i~nCyQd~DP-----Ts--ee~~dLid--T-DGg--~iri~ga-h~ii~Lv~f~~sLlvfc~NGV--W 416 (771) T protein:vir:95 359 DSP------AD-IVNCYQDGDP-----TS--TEEPELVD--T-DGG--FIRIEGA-HDIINLVNVGSAVMVVAANGI--W 416 (771) T ss_pred cch------hh-cccccccCCC-----ch--hhhhhhhh--c-CCC--EEEecCC-CCceeEEEecceEEEEEecce--E Confidence 310 01 1257776641 11 22456664 2 222 3444433 468999999999999999998 9 Q ss_pred EecCCCCC-----ceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEEEEccCceeeecCCHHHHHHHHhcC Q lcl|Aclame:pro 215 TLTGSADT-----SQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVYLIGAGEKNKISTATIDKIIRYYS 289 (477) Q Consensus 215 ~~tG~~~~-----~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy~~~g~q~~rISt~~IE~~i~~y~ 289 (477) ...|.++. .|++-++. ++||.+|.|+..+|+.++|.|.+.-.+..+..++-+.+|-|+...||+.+++.+ T Consensus 417 Ai~ggsd~g~tAtdY~ltKIs-----~vg~sspnSvVvvg~~i~ywsdtgIyal~~Ndfn~~tAqnLTekTIq~~~~~I~ 491 (771) T protein:vir:95 417 MIQGGSDYGFTATNYLVTKIS-----EHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVANNLTEKTIQKYYEKIP 491 (771) T ss_pred EEEeccCCceeeeeeEEEEee-----eeccCCCccEEEecceEEEeeCCceEEEeecccCcchhhccchHHHHHHHhhcc Confidence 99555554 44544433 589999999999999999999998888888889999999999999999999998 Q ss_pred ccccceeEEEEE-EECCEEEEEEEcCCe--------E-EEEeccccCcceeeEEec-CCCcc--------cc------eE Q lcl|Aclame:pro 290 ADELAASFMESI-RFDNHELLLLHLPKH--------T-LCFDGSASHQYSQWSLLK-SGFYD--------EP------YR 344 (477) Q Consensus 290 ~~e~a~a~a~s~-~~~GH~fyvitfP~~--------T-w~yD~~t~~Wher~s~~~-~~~~~--------~r------~R 344 (477) +.-.+ .+.-.| ..|++ |++.+|++ | +|+|.+++..++ |.+-. +++.. -+ -| T Consensus 492 ~dk~k-nVtg~fd~~e~r--vyw~yPn~~D~~~e~~t~LV~dLalgaFYp-~~i~~~~ag~l~~~vg~~~~p~~~lv~T~ 567 (771) T protein:vir:95 492 SDAIL-NATGFYDSYDKK--VKWLYNTVLDGRTEPVTELVFDLALGAFYP-SKIGSLTAGRLPIPVGSVKIPPYKLVETG 567 (771) T ss_pred hhhhc-ceEEEEEccCCE--EEEEecceecCCCcceeeeeeeeccccccc-ccccccccCccceeeeeeecCcccccccc Confidence 54444 343233 23666 77888842 2 999999998875 42221 11111 00 01 Q ss_pred EEE-----EEEeCCeE----------EEE------EcCCCeEEEEcCCCccc-------------------------CCC Q lcl|Aclame:pro 345 AID-----FMFFDNQI----------TVG------DKKEGVLGHLIFNASNQ-------------------------YEQ 378 (477) Q Consensus 345 a~~-----~~~~~g~~----------~vG------D~~~g~l~~Ld~~~~td-------------------------~G~ 378 (477) +.. .+-..|.. +++ -...|.-+++.+..+++ ++. T Consensus 568 ~eV~v~~~~v~~tG~~vtV~~~~r~~~~~~~~y~~~~~dg~~g~~~Fa~~~~~~f~DW~sv~~~~vdy~sy~~~gY~~~g 647 (771) T protein:vir:95 568 EEVTVASEQVTATGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDEEFVDWKSVDGIGVDAPAYLLTGYLAGG 647 (771) T ss_pred ceEEecceeeEecCCceEEEEEEeeccccceEEEEEEecCCCeeEEeccccCcceeecccCCCcccchHHHHHhhhhccc Confidence 111 00000100 000 01112222233322222 222 Q ss_pred EeeEEEeeceeccCCceEEEEEEEEEeCCCCCCc-----eEE---EEeeeCcc--ccCcceEe-c-------cC-----C Q lcl|Aclame:pro 379 QTEHLLYTPMIKADNARLFDFELEASTGVAQIAD-----KLF---LSVTTDGI--NYSREQLI-E-------QN-----S 435 (477) Q Consensus 379 ~i~~~~~tP~~~~~~~R~~~~ele~~~Gvgq~~~-----~v~---l~~SdDG~--tws~~~~~-~-------~g-----~ 435 (477) -+.+....|+++.--+.--+-=||- |-|.+.| -|| .+||-|++ .|++.+++ + .| - T Consensus 648 d~~~~k~~PYit~y~~~tedg~v~~--~~g~~~p~n~sSclm~~sw~ws~s~~t~k~~~~~eaYk~~~~~~p~~~~~~~y 725 (771) T protein:vir:95 648 DYQREKFVPYITFHFKKTEDGFVED--AEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRRHFFPDNIDNQFD 725 (771) T ss_pred hheeeeccceEEEEEEeecccceec--ccccccccCCcceEEEEEeeeecCCCCCccccchheeeecceeccCCcchhcC Confidence 2334444444432211111111222 2232222 144 67888865 57666543 1 11 1 Q ss_pred Cce--eceeEEEEEeeeccceeeEEEEEEeeCCe--eEEEEEEEeC Q lcl|Aclame:pro 436 PFQ--YDKRILWRRIGRVRKNIGFKIRIITKSPV--TLSDLSIRME 477 (477) Q Consensus 436 ~g~--~~~r~~~~RlG~~~~~vgf~~r~~~~~~v--~l~~~~~~~E 477 (477) +++ =++..+.| |+. |+ .|+|+.+-..- -|.|-++-+. T Consensus 726 p~~~VV~TKsriR--G~G--r~-~~~rf~s~~gKdlhl~Gysil~~ 766 (771) T protein:vir:95 726 DGNSVVETKSRLR--GSG--KV-LSLYITTEPKKNLHIYGWSMLVD 766 (771) T ss_pred Cccceeeeeheee--ecc--eE-EEEEEEecCCcceEEEeEEEEEe Confidence 111 11222333 433 43 67788765543 4667666666 No 14 >protein:vir:102644 Length: 594 # NCBI annotation: Hypothetical protein # Family: family:all:780 # MgeID: mge:1624 # MgeName: VP2 # Cross-refs: genbank:acc:YP_024422;genbank:gi:48696643;genbank:GeneID:2948111 Probab=96.40 E-value=0.00066 Score=38.03 Aligned_cols=445 Identities=14% Similarity=0.081 Sum_probs=186.3 Q ss_pred ccee-ceeeccccccccc---ccc---eee-e-eecccccccccccccccccccccCcceeeccchhe---eeEEEeecC Q lcl|Aclame:pro 7 MPKI-QIPLAKGLVKDIK---TAD---YID-A-LPVNMLATPKEVLNASGYLRSFPGIEKKQDAKGVS---RGVHFNTKN 74 (477) Q Consensus 7 M~~~-~iPl~~G~~~~~~---~~d---~i~-~-~pvNl~~~~~e~~~s~~~L~~~PGl~~~~~~~g~~---rG~~~~~~~ 74 (477) |+.+ |--+..|-=+ +. ..| |.+ | .+.|+++.|-. .++.-||+...+..+++. |=+-|.... T Consensus 1 m~~~~~~~F~~Gels-P~l~~r~Dl~~y~~~~~~~~n~~~~~~G------~~~rR~G~~~~~~~~~~~~~~~lipF~~s~ 73 (594) T protein:vir:10 1 MADFSQTSFKGGVIA-PRLQFNEYESAYHHSIEDAVNFVVTEQG------SLITRCGSEEVGLCQDGEVRLFRLPAVDAP 73 (594) T ss_pred CceeeccccCcceec-ceeccchhHHHHHHHHhhhhceEEEecC------CeecCChhHhhhhccCCCCCEEEEEEEeCC Confidence 5542 2222222111 11 112 333 2 46888876544 445678888888776543 222233333 Q ss_pred CeEEEE-ECCeeEee------------------eeeEE--eecccccEEEEeCCCeEEEEECCCc---ceEEEEcccceE Q lcl|Aclame:pro 75 NALYRV-CGNTLYRN------------------DKEVA--DIAGMSRVSMSHSSHSQAICFEGKV---KLYRYDGTEKAL 130 (477) Q Consensus 75 g~ly~V-~G~~Ly~v------------------~~~iG--~i~g~g~Vsma~N~~~~~Iv~~g~~---~~y~yd~~~~~~ 130 (477) .-=|.+ -|.+-+++ ++... ..+....+.++.+.+. +.++.... .+++.......+ T Consensus 74 ~~~~~le~g~~~~r~~~~~~~~v~~~~~~~~~~~tp~~~t~~~~l~~i~~tqsad~-~~~~~~~~~p~~L~R~~~~~w~~ 152 (594) T protein:vir:10 74 SNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTAYDTIGDDAGAANTGR-LIMVHPALQPKRLYRDNNNAWQF 152 (594) T ss_pred CCeEEEEEcCCeEEEEecCcEEEEccCCCcccccccceeeccCCccceEEEEEeeE-EEEEcCCCCceEEEEccCCCceE Confidence 333332 23322222 11100 0012233444444332 22222222 223332233333 Q ss_pred eecCcccCC--CCCCCceeEEEEecceEEEEeeCC--CeEEEe---cccC-----ccCcCCCccceEEeecCCceEEEEe Q lcl|Aclame:pro 131 SNWPKDKYP--QYDLGEVIDVCRNRGRYIWLQKGG--ERFGVT---DLED-----ESKPDRYQPFYRAESQPDGIVSVDA 198 (477) Q Consensus 131 ~~~~~~~~p--~~~~~~~~dv~~~dgyfV~~~~g~--~~~~iS---~L~d-----~s~~~~~l~fatAE~~pD~iv~v~~ 198 (477) ..++...-| -.+.+-+..|+|..+|.+|.-.-+ +.++.| ++.| +..++++.+++. ++-++++.++. T Consensus 153 ~~~~~~~~p~~~~~~~~p~~v~f~q~RL~f~~~~~~p~~v~~Srtgd~~nF~~~~~~~ddd~i~~~~--s~~~~~~~~v~ 230 (594) T protein:vir:10 153 VNMHTGAVPAEWSPSNYPQTVGIFQNRVWYVGSPVHRTYFWATRAGKLEDIAPSTANNPNDPISFVG--IMEGTPCWIIA 230 (594) T ss_pred EecccCcccccccCCccceEEEEEeeeEEEEeCCCCCceEEEEecccccccccCCCCCCCccEEEEE--ecccceEEEEe Confidence 333221111 011123357999999987744221 123333 1111 123555566643 44578889999 Q ss_pred eCCEEEEEecceEEEEEecCCCCCcee--eEEecccceEeeecccchhheecCCeEEEEecccccCcEEE------EccC Q lcl|Aclame:pro 199 WRDLIVCFGSSSIEYFTLTGSADTSQP--LYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVY------LIGA 270 (477) Q Consensus 199 ~~~~l~lfG~~TtEvw~~tG~~~~~f~--~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy------~~~g 270 (477) ..+.|++|.+..- |..+|+++-|+- .....+.. ..||.. ---..+++++++++... ..|+ ..++ T Consensus 231 ~~~~L~i~t~~~e--~~l~~~~~~~lTp~~~~~~~~s--~~g~~~-~~P~~vg~~~~fv~~~g---~~vre~~y~~~~d~ 302 (594) T protein:vir:10 231 SSDVLTIGTTIND--YQLAASTGVSVTAATAILRRSS--VQGTAA-VQGIPAEEQVIFCSRNK---SKVYAMNYVREQDN 302 (594) T ss_pred cCCceEEEecCce--EEEecCCCcccccceEEEEEee--eeccCC-CcceeeCCeEEEEcCCC---CEEEEEEEeeccCc Confidence 9898877755554 666665433321 11111111 257743 24467899999997642 2233 2457 Q ss_pred ceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCC---eEEEEecccc--CcceeeEEecCCCcccceEE Q lcl|Aclame:pro 271 GEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPK---HTLCFDGSAS--HQYSQWSLLKSGFYDEPYRA 345 (477) Q Consensus 271 ~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~---~Tw~yD~~t~--~Wher~s~~~~~~~~~r~Ra 345 (477) |+++.+|-+ ++.++..-.......-+.-+|+++-++++.+...| -.|.||...+ -|| ||-+. +...++ T Consensus 303 y~~~dlt~~-a~hl~~~~~~~~~~~i~~~a~~~~p~~~~~~v~~dG~l~~~ty~~eq~v~aWs-~~~~t-----~G~v~~ 375 (594) T protein:vir:10 303 WIPDEMSSQ-AQHLFTPISSAKGASVRRVAYISDAAKSLWVVLENGQINYCCFDRTTDTKAWT-QLELS-----GGKVID 375 (594) T ss_pred eeccchhhh-hhhhcCccccccCceEEEEEEecCCceEEEEEeCCCeEEEEEEecccceeeeE-eeccC-----CCcEEE Confidence 888888654 44443210011112122235788888877777775 3566765544 455 33331 112333 Q ss_pred EEEEEeC---Ce-EEE--EEcCCC--e----EEEEcCCCccc------------CCCEe---eEEE-eeceeccCCc--- Q lcl|Aclame:pro 346 IDFMFFD---NQ-ITV--GDKKEG--V----LGHLIFNASNQ------------YEQQT---EHLL-YTPMIKADNA--- 394 (477) Q Consensus 346 ~~~~~~~---g~-~~v--GD~~~g--~----l~~Ld~~~~td------------~G~~i---~~~~-~tP~~~~~~~--- 394 (477) .|.+... .- .+| .|..+| + |=.|+.....+ +..++ .|+. .+..+.+|++ T Consensus 376 va~i~~~~~d~l~~~V~R~~ti~g~~~~y~~lE~~~~~~~~~~~~~~~~d~~~~~~~~vsgl~hLeg~tv~v~aDG~~~~ 455 (594) T protein:vir:10 376 IAAAFNPDSDYAYVAVVRSKAINGVQKNYTVLEKISSPRTDWKRADGWVVAQVNQNGDVLNLDRYIGRTAVIFSKYGLEA 455 (594) T ss_pred EEEeecCCCCEEEEEEEECCccccceeeEEEeecCCCccccccccceeeeecccccceeecccccCCceEEEEeCCeecC Confidence 3333211 00 111 001111 0 11111110000 00000 0000 0000111111 Q ss_pred -------------------eEE------EEE-----EEEEeCCC--CCC----ceEEEEeeeC-ccccCcc-----eE-e Q lcl|Aclame:pro 395 -------------------RLF------DFE-----LEASTGVA--QIA----DKLFLSVTTD-GINYSRE-----QL-I 431 (477) Q Consensus 395 -------------------R~~------~~e-----le~~~Gvg--q~~----~~v~l~~SdD-G~tws~~-----~~-~ 431 (477) ..+ ..+ +|+..+-| +.. .++-++.-+- |..-+.. +. . T Consensus 456 ~~~V~~g~itL~~~~~~~~~~v~VGl~Y~s~i~~lp~~~~~~~gs~~g~r~ri~r~~v~~~~S~g~~vg~~~~~~r~~~~ 535 (594) T protein:vir:10 456 EVEVNNIGLTHRINGYDPNTVYYVGYKMDSYFRTLTPSNGDMKKSMFGSKIRISKVQLALFDSIEPTVNGEPADDRSTDD 535 (594) T ss_pred CeEEcCCeeEeeccCCCCcceEEEeeeeeEEEEeecccccCCcccccCccEEEEEEEEEEEcceeeEECCcccccccchh Confidence 000 011 11111111 111 1233332222 2111100 00 0 Q ss_pred c--------cCCC--ceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 432 E--------QNSP--FQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 432 ~--------~g~~--g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) . .|.+ .--++++++..+|..++.- +.||-+.|-|.+|.+.-.+|| T Consensus 536 ~~~~~~~~~~g~~~~~tg~~~v~~~~~G~~~~~~-i~I~qd~PlPltvlai~~ev~ 590 (594) T protein:vir:10 536 IMDARLLDFSSNSGSSNGTRLVDYNPLGWENDGK-MVIAVEQPFLCEVVGVFSVVQ 590 (594) T ss_pred hccccCCcccCcccccCCceEEEEccCCcCcccE-EEEEECCCcCEEEEEEEEEEE Confidence 0 0111 1234557777788776553 777777777888888888888 No 15 >protein:vir:107802 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1673 # MgeName: BIP-1 # Cross-refs: genbank:acc:NP_996623;genbank:gi:45580757;genbank:GeneID:2767878 Probab=95.46 E-value=0.002 Score=35.36 Aligned_cols=434 Identities=11% Similarity=0.042 Sum_probs=151.2 Q ss_pred Cchhhccceeceeecccccccc--------cccce--eeeeeccccccc-ccccccc-----cccccccCcceeeccchh Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVKDI--------KTADY--IDALPVNMLATP-KEVLNAS-----GYLRSFPGIEKKQDAKGV 64 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~~~--------~~~d~--i~~~pvNl~~~~-~e~~~s~-----~~L~~~PGl~~~~~~~g~ 64 (477) .+.+- .++.=|.+ +|... +.+|. +.+ =|.-|+. +...... -.+.+.|+...-...... T Consensus 96 ~~~~~---~~~~~~~t-py~~~~l~~l~~~q~aD~~~i~h--~~~~p~~L~r~~~~~W~l~~~~f~~~p~~p~~~~at~~ 169 (681) T protein:vir:10 96 TLLDG---AVPYEIAN-PYAEADLFNIHYVQSADVLTLVH--PNYAPRELRRLGATNWQLATIAFTSPVATPTSVTATSN 169 (681) T ss_pred EEeeC---cEeEEecC-CCChhhhcCceEEEEcCEEEEEC--CCCcceEEEEccCCceEEEEEEeccccccceeeeeecc Confidence 11110 01110111 12111 11121 100 0000000 0000000 000000110000000001 Q ss_pred eeeEEEeecCCeEEEEECCeeEee-eeeEEeec-----c--cc--cEEEEeCCCeEEEEECCCcceEEEEcccceE---- Q lcl|Aclame:pro 65 SRGVHFNTKNNALYRVCGNTLYRN-DKEVADIA-----G--MS--RVSMSHSSHSQAICFEGKVKLYRYDGTEKAL---- 130 (477) Q Consensus 65 ~rG~~~~~~~g~ly~V~G~~Ly~v-~~~iG~i~-----g--~g--~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~---- 130 (477) ..|..+.. .-.+..|........ .+.-+++. + .. ..+..+-....-|. .+....+.|-.++... T Consensus 170 ~~~~~~t~-~~~v~avda~t~~~s~~~~~~tvt~~~~~~~~~~t~~w~a~~g~~~~~V~-~~~~gi~g~ig~~~~~~~~~ 247 (681) T protein:vir:10 170 NKGTDYTY-RYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVY-KEQGGLYGYIGQTTGTSLVD 247 (681) T ss_pred CCccceeE-eEEEEEeecccceeecCCcceEEeeeeecCCcceeEEEEecCCceeeeec-ccceeEEEEeeccceeeeee Confidence 11111110 001111111111100 00000000 0 00 00000000000000 0000000010000000 Q ss_pred ----------eecCcccCCCCCCCceeEEEEecceEEEEee-CC-CeEEEe---cc-----cCccCcCCCccceEEeecC Q lcl|Aclame:pro 131 ----------SNWPKDKYPQYDLGEVIDVCRNRGRYIWLQK-GG-ERFGVT---DL-----EDESKPDRYQPFYRAESQP 190 (477) Q Consensus 131 ----------~~~~~~~~p~~~~~~~~dv~~~dgyfV~~~~-g~-~~~~iS---~L-----~d~s~~~~~l~fatAE~~p 190 (477) ..|.+..+.. ..+-+..|+|..+|++|.-. .. ..++.| ++ ..+..+|++.+++.+-.++ T Consensus 248 ~~~~~~~~~t~~~~~~~~~~-~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~~~ddD~i~~~~~~~~~ 326 (681) T protein:vir:10 248 DNIAPDLSVTPPIYDAVFNA-AGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFRVAAREA 326 (681) T ss_pred cccccCcccccccccccccc-CCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCCCCCCccEEEEEcCCcc Confidence 0111111111 11234579999999988521 11 122223 11 2233466777888888888 Q ss_pred CceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEEE---- Q lcl|Aclame:pro 191 DGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVY---- 266 (477) Q Consensus 191 D~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy---- 266 (477) +.|--+++++ .|++|.+. -|+ ..+|..+-++-+--..-...=..||.. -.-..+++++++++... ..|+ T Consensus 327 ~~i~~~v~~~-~lli~t~~-~e~-~l~~~~~~~lTP~~~~~~~~s~~g~~~-~~Pv~vg~~v~fv~~~g---~~vre~~y 399 (681) T protein:vir:10 327 NAIRHIVPLT-ELLLLTSS-GEW-RVASVNSDAVTPTTISVRPQSYVGATD-VQPVVVNNTTIYGAARG---GHVRELAY 399 (681) T ss_pred eeEEEEEecC-cEEEEEcC-cEE-EEecCCCccccceeEEEEEeeeecccc-ccceeeCCeEEEEecCC---CEEEEEEE Confidence 9998888885 56555555 544 545532222211111111112368854 56678899999997663 2232 Q ss_pred --EccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCC---eEEEEecccc--CcceeeEEecCCCc Q lcl|Aclame:pro 267 --LIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPK---HTLCFDGSAS--HQYSQWSLLKSGFY 339 (477) Q Consensus 267 --~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~---~Tw~yD~~t~--~Wher~s~~~~~~~ 339 (477) ..++|+++.+| .-.+.+++.+ .+ +.-+|+++.++..++.+.+ ..+.|+-..+ -|| ||-.. T Consensus 400 ~~~~d~~~~~dlt-~~a~Hl~~~~-~i-----~~~a~~~~p~~~~~~v~~dg~l~~~ty~~eq~v~aW~-~~~~~----- 466 (681) T protein:vir:10 400 NWQANGFVTGDLS-LRAAHLFDNL-DI-----LDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWH-QHDTD----- 466 (681) T ss_pred eeecCceeccchh-hhhhhhcCCC-Ce-----EEEEEecCCCEEEEEEecCCcEEEEEEecccceeeEE-EEecC----- Confidence 45677888886 1222223221 11 1225888999988888885 5677776655 576 35331 Q ss_pred ccceEEEEEEEeCCe---EE----------------------------------------------EEEcCCCeEEEEcC Q lcl|Aclame:pro 340 DEPYRAIDFMFFDNQ---IT----------------------------------------------VGDKKEGVLGHLIF 370 (477) Q Consensus 340 ~~r~Ra~~~~~~~g~---~~----------------------------------------------vGD~~~g~l~~Ld~ 370 (477) ...+..|.+-.++. |+ .-|+.+|+...+-- T Consensus 467 -g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~~~~~sgl~~leG~tv~i~a 545 (681) T protein:vir:10 467 -GVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILA 545 (681) T ss_pred -CcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcceeeeccccCCCCcEEEEEe Confidence 12233222211100 00 01111221111100 Q ss_pred CCcc--------------------cCCCEeeEE-EeeceeccCCceEEEEEEEEEeCCCCCC----ceEEEEeeeC-ccc Q lcl|Aclame:pro 371 NASN--------------------QYEQQTEHL-LYTPMIKADNARLFDFELEASTGVAQIA----DKLFLSVTTD-GIN 424 (477) Q Consensus 371 ~~~t--------------------d~G~~i~~~-~~tP~~~~~~~R~~~~ele~~~Gvgq~~----~~v~l~~SdD-G~t 424 (477) +-.. .=|-++... ...|+ ++....|.++.. .++-|+.-+. |.. T Consensus 546 DG~~~~~~~V~~G~itl~~~~~~v~VGl~Y~s~i~~lp~-----------~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~ 614 (681) T protein:vir:10 546 DGAVHPQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPV-----------AMQLDGSFGQGRVKNINKLWLRVHRSSGIF 614 (681) T ss_pred CCeecCcEeecCcEEEeCcCCceEEEeeeceeEEEecce-----------eeecCCcccCCceEEEEEEEEEEEcccceE Confidence 0000 000011111 11111 111111111111 1233333333 221 Q ss_pred cC--cceEe--------ccCCC---ceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 425 YS--REQLI--------EQNSP---FQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 425 ws--~~~~~--------~~g~~---g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) .+ +.++. .+|.+ +--+.|+.+. .|.-+ +.-++||-+.|-|..|.++..+|| T Consensus 615 ~~~~~~~l~~~~~~~~~~~g~~~~l~TG~~~v~v~-~~~~~-~~~v~I~qd~PlP~tvlsi~~ev~ 678 (681) T protein:vir:10 615 AGPHADALTEVKQRTSEPYGSPPALKSEEIPLVLS-PKWGD-SGQLFVRQADPLPLMIVSMSAEIA 678 (681) T ss_pred EeeCCCceEEEEEeccccccccCCccCCeEEEEeC-CCcCc-ceEEEEEECCCcCEEEEEeeEEEE Confidence 11 11110 11221 1112333331 13233 334677878888888888888888 No 16 >protein:vir:98487 Length: 681 # NCBI annotation: hypothetical protein predicted by GeneMark # Family: family:all:780 # MgeID: mge:1592 # MgeName: BMP-1 # Cross-refs: genbank:acc:NP_996575;genbank:gi:45569506;genbank:GeneID:2767815 Probab=95.46 E-value=0.002 Score=35.36 Aligned_cols=434 Identities=11% Similarity=0.042 Sum_probs=151.2 Q ss_pred Cchhhccceeceeecccccccc--------cccce--eeeeeccccccc-ccccccc-----cccccccCcceeeccchh Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVKDI--------KTADY--IDALPVNMLATP-KEVLNAS-----GYLRSFPGIEKKQDAKGV 64 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~~~--------~~~d~--i~~~pvNl~~~~-~e~~~s~-----~~L~~~PGl~~~~~~~g~ 64 (477) .+.+- .++.=|.+ +|... +.+|. +.+ =|.-|+. +...... -.+.+.|+...-...... T Consensus 96 ~~~~~---~~~~~~~t-py~~~~l~~l~~~q~aD~~~i~h--~~~~p~~L~r~~~~~W~l~~~~f~~~p~~p~~~~at~~ 169 (681) T protein:vir:98 96 TLLDG---AVPYEIAN-PYAEADLFNIHYVQSADVLTLVH--PNYAPRELRRLGATNWQLATIAFTSPVATPTSVTATSN 169 (681) T ss_pred EEeeC---cEeEEecC-CCChhhhcCceEEEEcCEEEEEC--CCCcceEEEEccCCceEEEEEEeccccccceeeeeecc Confidence 11110 01110111 12111 11121 100 0000000 0000000 000000110000000001 Q ss_pred eeeEEEeecCCeEEEEECCeeEee-eeeEEeec-----c--cc--cEEEEeCCCeEEEEECCCcceEEEEcccceE---- Q lcl|Aclame:pro 65 SRGVHFNTKNNALYRVCGNTLYRN-DKEVADIA-----G--MS--RVSMSHSSHSQAICFEGKVKLYRYDGTEKAL---- 130 (477) Q Consensus 65 ~rG~~~~~~~g~ly~V~G~~Ly~v-~~~iG~i~-----g--~g--~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~---- 130 (477) ..|..+.. .-.+..|........ .+.-+++. + .. ..+..+-....-|. .+....+.|-.++... T Consensus 170 ~~~~~~t~-~~~v~avda~t~~~s~~~~~~tvt~~~~~~~~~~t~~w~a~~g~~~~~V~-~~~~gi~g~ig~~~~~~~~~ 247 (681) T protein:vir:98 170 NKGTDYTY-RYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVY-KEQGGLYGYIGQTTGTSLVD 247 (681) T ss_pred CCccceeE-eEEEEEeecccceeecCCcceEEeeeeecCCcceeEEEEecCCceeeeec-ccceeEEEEeeccceeeeee Confidence 11111110 001111111111100 00000000 0 00 00000000000000 0000000010000000 Q ss_pred ----------eecCcccCCCCCCCceeEEEEecceEEEEee-CC-CeEEEe---cc-----cCccCcCCCccceEEeecC Q lcl|Aclame:pro 131 ----------SNWPKDKYPQYDLGEVIDVCRNRGRYIWLQK-GG-ERFGVT---DL-----EDESKPDRYQPFYRAESQP 190 (477) Q Consensus 131 ----------~~~~~~~~p~~~~~~~~dv~~~dgyfV~~~~-g~-~~~~iS---~L-----~d~s~~~~~l~fatAE~~p 190 (477) ..|.+..+.. ..+-+..|+|..+|++|.-. .. ..++.| ++ ..+..+|++.+++.+-.++ T Consensus 248 ~~~~~~~~~t~~~~~~~~~~-~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~~~ddD~i~~~~~~~~~ 326 (681) T protein:vir:98 248 DNIAPDLSVTPPIYDAVFNA-AGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFRVAAREA 326 (681) T ss_pred cccccCcccccccccccccc-CCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCCCCCCccEEEEEcCCcc Confidence 0111111111 11234579999999988521 11 122223 11 2233466777888888888 Q ss_pred CceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEEE---- Q lcl|Aclame:pro 191 DGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVY---- 266 (477) Q Consensus 191 D~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy---- 266 (477) +.|--+++++ .|++|.+. -|+ ..+|..+-++-+--..-...=..||.. -.-..+++++++++... ..|+ T Consensus 327 ~~i~~~v~~~-~lli~t~~-~e~-~l~~~~~~~lTP~~~~~~~~s~~g~~~-~~Pv~vg~~v~fv~~~g---~~vre~~y 399 (681) T protein:vir:98 327 NAIRHIVPLT-ELLLLTSS-GEW-RVASVNSDAVTPTTISVRPQSYVGATD-VQPVVVNNTTIYGAARG---GHVRELAY 399 (681) T ss_pred eeEEEEEecC-cEEEEEcC-cEE-EEecCCCccccceeEEEEEeeeecccc-ccceeeCCeEEEEecCC---CEEEEEEE Confidence 9998888885 56555555 544 545532222211111111112368854 56678899999997663 2232 Q ss_pred --EccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCC---eEEEEecccc--CcceeeEEecCCCc Q lcl|Aclame:pro 267 --LIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPK---HTLCFDGSAS--HQYSQWSLLKSGFY 339 (477) Q Consensus 267 --~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~---~Tw~yD~~t~--~Wher~s~~~~~~~ 339 (477) ..++|+++.+| .-.+.+++.+ .+ +.-+|+++.++..++.+.+ ..+.|+-..+ -|| ||-.. T Consensus 400 ~~~~d~~~~~dlt-~~a~Hl~~~~-~i-----~~~a~~~~p~~~~~~v~~dg~l~~~ty~~eq~v~aW~-~~~~~----- 466 (681) T protein:vir:98 400 NWQANGFVTGDLS-LRAAHLFDNL-DI-----LDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWH-QHDTD----- 466 (681) T ss_pred eeecCceeccchh-hhhhhhcCCC-Ce-----EEEEEecCCCEEEEEEecCCcEEEEEEecccceeeEE-EEecC----- Confidence 45677888886 1222223221 11 1225888999988888885 5677776655 576 35331 Q ss_pred ccceEEEEEEEeCCe---EE----------------------------------------------EEEcCCCeEEEEcC Q lcl|Aclame:pro 340 DEPYRAIDFMFFDNQ---IT----------------------------------------------VGDKKEGVLGHLIF 370 (477) Q Consensus 340 ~~r~Ra~~~~~~~g~---~~----------------------------------------------vGD~~~g~l~~Ld~ 370 (477) ...+..|.+-.++. |+ .-|+.+|+...+-- T Consensus 467 -g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~~~~~sgl~~leG~tv~i~a 545 (681) T protein:vir:98 467 -GVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILA 545 (681) T ss_pred -CcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcceeeeccccCCCCcEEEEEe Confidence 12233222211100 00 01111221111100 Q ss_pred CCcc--------------------cCCCEeeEE-EeeceeccCCceEEEEEEEEEeCCCCCC----ceEEEEeeeC-ccc Q lcl|Aclame:pro 371 NASN--------------------QYEQQTEHL-LYTPMIKADNARLFDFELEASTGVAQIA----DKLFLSVTTD-GIN 424 (477) Q Consensus 371 ~~~t--------------------d~G~~i~~~-~~tP~~~~~~~R~~~~ele~~~Gvgq~~----~~v~l~~SdD-G~t 424 (477) +-.. .=|-++... ...|+ ++....|.++.. .++-|+.-+. |.. T Consensus 546 DG~~~~~~~V~~G~itl~~~~~~v~VGl~Y~s~i~~lp~-----------~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~ 614 (681) T protein:vir:98 546 DGAVHPQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPV-----------AMQLDGSFGQGRVKNINKLWLRVHRSSGIF 614 (681) T ss_pred CCeecCcEeecCcEEEeCcCCceEEEeeeceeEEEecce-----------eeecCCcccCCceEEEEEEEEEEEcccceE Confidence 0000 000011111 11111 111111111111 1233333333 221 Q ss_pred cC--cceEe--------ccCCC---ceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 425 YS--REQLI--------EQNSP---FQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 425 ws--~~~~~--------~~g~~---g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) .+ +.++. .+|.+ +--+.|+.+. .|.-+ +.-++||-+.|-|..|.++..+|| T Consensus 615 ~~~~~~~l~~~~~~~~~~~g~~~~l~TG~~~v~v~-~~~~~-~~~v~I~qd~PlP~tvlsi~~ev~ 678 (681) T protein:vir:98 615 AGPHADALTEVKQRTSEPYGSPPALKSEEIPLVLS-PKWGD-SGQLFVRQADPLPLMIVSMSAEIA 678 (681) T ss_pred EeeCCCceEEEEEeccccccccCCccCCeEEEEeC-CCcCc-ceEEEEEECCCcCEEEEEeeEEEE Confidence 11 11110 11221 1112333331 13233 334677878888888888888888 No 17 >protein:vir:107423 Length: 681 # NCBI annotation: Bbp13 # Family: family:all:780 # MgeID: mge:1537 # MgeName: BPP-1 # Cross-refs: genbank:acc:NP_958682;genbank:gi:41179374;genbank:GeneID:2717217 Probab=95.46 E-value=0.002 Score=35.36 Aligned_cols=434 Identities=11% Similarity=0.042 Sum_probs=151.2 Q ss_pred Cchhhccceeceeecccccccc--------cccce--eeeeeccccccc-ccccccc-----cccccccCcceeeccchh Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVKDI--------KTADY--IDALPVNMLATP-KEVLNAS-----GYLRSFPGIEKKQDAKGV 64 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~~~--------~~~d~--i~~~pvNl~~~~-~e~~~s~-----~~L~~~PGl~~~~~~~g~ 64 (477) .+.+- .++.=|.+ +|... +.+|. +.+ =|.-|+. +...... -.+.+.|+...-...... T Consensus 96 ~~~~~---~~~~~~~t-py~~~~l~~l~~~q~aD~~~i~h--~~~~p~~L~r~~~~~W~l~~~~f~~~p~~p~~~~at~~ 169 (681) T protein:vir:10 96 TLLDG---AVPYEIAN-PYAEADLFNIHYVQSADVLTLVH--PNYAPRELRRLGATNWQLATIAFTSPVATPTSVTATSN 169 (681) T ss_pred EEeeC---cEeEEecC-CCChhhhcCceEEEEcCEEEEEC--CCCcceEEEEccCCceEEEEEEeccccccceeeeeecc Confidence 11110 01110111 12111 11121 100 0000000 0000000 000000110000000001 Q ss_pred eeeEEEeecCCeEEEEECCeeEee-eeeEEeec-----c--cc--cEEEEeCCCeEEEEECCCcceEEEEcccceE---- Q lcl|Aclame:pro 65 SRGVHFNTKNNALYRVCGNTLYRN-DKEVADIA-----G--MS--RVSMSHSSHSQAICFEGKVKLYRYDGTEKAL---- 130 (477) Q Consensus 65 ~rG~~~~~~~g~ly~V~G~~Ly~v-~~~iG~i~-----g--~g--~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~---- 130 (477) ..|..+.. .-.+..|........ .+.-+++. + .. ..+..+-....-|. .+....+.|-.++... T Consensus 170 ~~~~~~t~-~~~v~avda~t~~~s~~~~~~tvt~~~~~~~~~~t~~w~a~~g~~~~~V~-~~~~gi~g~ig~~~~~~~~~ 247 (681) T protein:vir:10 170 NKGTDYTY-RYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVY-KEQGGLYGYIGQTTGTSLVD 247 (681) T ss_pred CCccceeE-eEEEEEeecccceeecCCcceEEeeeeecCCcceeEEEEecCCceeeeec-ccceeEEEEeeccceeeeee Confidence 11111110 001111111111100 00000000 0 00 00000000000000 0000000010000000 Q ss_pred ----------eecCcccCCCCCCCceeEEEEecceEEEEee-CC-CeEEEe---cc-----cCccCcCCCccceEEeecC Q lcl|Aclame:pro 131 ----------SNWPKDKYPQYDLGEVIDVCRNRGRYIWLQK-GG-ERFGVT---DL-----EDESKPDRYQPFYRAESQP 190 (477) Q Consensus 131 ----------~~~~~~~~p~~~~~~~~dv~~~dgyfV~~~~-g~-~~~~iS---~L-----~d~s~~~~~l~fatAE~~p 190 (477) ..|.+..+.. ..+-+..|+|..+|++|.-. .. ..++.| ++ ..+..+|++.+++.+-.++ T Consensus 248 ~~~~~~~~~t~~~~~~~~~~-~~gyP~~v~f~q~RL~f~~~~~~p~~v~~Srsgdy~nF~~~~~~~ddD~i~~~~~~~~~ 326 (681) T protein:vir:10 248 DNIAPDLSVTPPIYDAVFNA-AGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFRVAAREA 326 (681) T ss_pred cccccCcccccccccccccc-CCCceEEEEEEcceEEEeeCCCCCcEEEEEcccCcccccccCCCCCCccEEEEEcCCcc Confidence 0111111111 11234579999999988521 11 122223 11 2233466777888888888 Q ss_pred CceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEEE---- Q lcl|Aclame:pro 191 DGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVY---- 266 (477) Q Consensus 191 D~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy---- 266 (477) +.|--+++++ .|++|.+. -|+ ..+|..+-++-+--..-...=..||.. -.-..+++++++++... ..|+ T Consensus 327 ~~i~~~v~~~-~lli~t~~-~e~-~l~~~~~~~lTP~~~~~~~~s~~g~~~-~~Pv~vg~~v~fv~~~g---~~vre~~y 399 (681) T protein:vir:10 327 NAIRHIVPLT-ELLLLTSS-GEW-RVASVNSDAVTPTTISVRPQSYVGATD-VQPVVVNNTTIYGAARG---GHVRELAY 399 (681) T ss_pred eeEEEEEecC-cEEEEEcC-cEE-EEecCCCccccceeEEEEEeeeecccc-ccceeeCCeEEEEecCC---CEEEEEEE Confidence 9998888885 56555555 544 545532222211111111112368854 56678899999997663 2232 Q ss_pred --EccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCC---eEEEEecccc--CcceeeEEecCCCc Q lcl|Aclame:pro 267 --LIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPK---HTLCFDGSAS--HQYSQWSLLKSGFY 339 (477) Q Consensus 267 --~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~---~Tw~yD~~t~--~Wher~s~~~~~~~ 339 (477) ..++|+++.+| .-.+.+++.+ .+ +.-+|+++.++..++.+.+ ..+.|+-..+ -|| ||-.. T Consensus 400 ~~~~d~~~~~dlt-~~a~Hl~~~~-~i-----~~~a~~~~p~~~~~~v~~dg~l~~~ty~~eq~v~aW~-~~~~~----- 466 (681) T protein:vir:10 400 NWQANGFVTGDLS-LRAAHLFDNL-DI-----LDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWH-QHDTD----- 466 (681) T ss_pred eeecCceeccchh-hhhhhhcCCC-Ce-----EEEEEecCCCEEEEEEecCCcEEEEEEecccceeeEE-EEecC----- Confidence 45677888886 1222223221 11 1225888999988888885 5677776655 576 35331 Q ss_pred ccceEEEEEEEeCCe---EE----------------------------------------------EEEcCCCeEEEEcC Q lcl|Aclame:pro 340 DEPYRAIDFMFFDNQ---IT----------------------------------------------VGDKKEGVLGHLIF 370 (477) Q Consensus 340 ~~r~Ra~~~~~~~g~---~~----------------------------------------------vGD~~~g~l~~Ld~ 370 (477) ...+..|.+-.++. |+ .-|+.+|+...+-- T Consensus 467 -g~v~~v~~i~~~~~d~l~~vv~r~~~g~~~~yie~~~~~~~~~~~~~~~vD~~~t~~~~~~~~~sgl~~leG~tv~i~a 545 (681) T protein:vir:10 467 -GVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILA 545 (681) T ss_pred -CcEEEEEEecCCCCcEEEEEEEecCCCCeEEEEEecCCccccccccceEeeccccccCcceeeeccccCCCCcEEEEEe Confidence 12233222211100 00 01111221111100 Q ss_pred CCcc--------------------cCCCEeeEE-EeeceeccCCceEEEEEEEEEeCCCCCC----ceEEEEeeeC-ccc Q lcl|Aclame:pro 371 NASN--------------------QYEQQTEHL-LYTPMIKADNARLFDFELEASTGVAQIA----DKLFLSVTTD-GIN 424 (477) Q Consensus 371 ~~~t--------------------d~G~~i~~~-~~tP~~~~~~~R~~~~ele~~~Gvgq~~----~~v~l~~SdD-G~t 424 (477) +-.. .=|-++... ...|+ ++....|.++.. .++-|+.-+. |.. T Consensus 546 DG~~~~~~~V~~G~itl~~~~~~v~VGl~Y~s~i~~lp~-----------~~~~~~g~~~g~~~ri~rv~lr~~~S~g~~ 614 (681) T protein:vir:10 546 DGAVHPQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPV-----------AMQLDGSFGQGRVKNINKLWLRVHRSSGIF 614 (681) T ss_pred CCeecCcEeecCcEEEeCcCCceEEEeeeceeEEEecce-----------eeecCCcccCCceEEEEEEEEEEEcccceE Confidence 0000 000011111 11111 111111111111 1233333333 221 Q ss_pred cC--cceEe--------ccCCC---ceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 425 YS--REQLI--------EQNSP---FQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 425 ws--~~~~~--------~~g~~---g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) .+ +.++. .+|.+ +--+.|+.+. .|.-+ +.-++||-+.|-|..|.++..+|| T Consensus 615 ~~~~~~~l~~~~~~~~~~~g~~~~l~TG~~~v~v~-~~~~~-~~~v~I~qd~PlP~tvlsi~~ev~ 678 (681) T protein:vir:10 615 AGPHADALTEVKQRTSEPYGSPPALKSEEIPLVLS-PKWGD-SGQLFVRQADPLPLMIVSMSAEIA 678 (681) T ss_pred EeeCCCceEEEEEeccccccccCCccCCeEEEEeC-CCcCc-ceEEEEEECCCcCEEEEEeeEEEE Confidence 11 11110 11221 1112333331 13233 334677878888888888888888 No 18 >protein:vir:95324 Length: 823 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1564 # MgeName: phiV10 # Cross-refs: genbank:acc:YP_512269;genbank:gi:89152436;genbank:GeneID:3952993 Probab=94.91 E-value=0.0032 Score=34.26 Aligned_cols=414 Identities=12% Similarity=0.097 Sum_probs=152.5 Q ss_pred Cchhhccceeceeecccccccccccceee-----------e-----------------eecccccccccccccccccc-- Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVKDIKTADYID-----------A-----------------LPVNMLATPKEVLNASGYLR-- 50 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~~~~~~d~i~-----------~-----------------~pvNl~~~~~e~~~s~~~L~-- 50 (477) +-...-.....++-.. +....|.+. . -..|.+.... +++ ++.+. T Consensus 170 v~~~~~~~~~t~ta~~----~~~~~d~vg~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~g~~~~~ 243 (823) T protein:vir:95 170 VYASASTGTITLTASA----SIFGAEQVGKLFYLEQPAVDSVPVWETSKSTSIGDIRRADSNYYRAVT-AGK-TGTLRPS 243 (823) T ss_pred EeccccCceeEEeecc----cccchhhccceEEEeccccceeeecceeeeecccceEEecccceeeee-ccc-cceeecc Confidence 0011111111111110 000111000 0 0111111000 000 11111 Q ss_pred cccCcceeeccchheeeEEEeecCCeEEEE--ECCeeEeeeeeEEeecccccE-EEEeCCCeEEEEECCCcceEEEEccc Q lcl|Aclame:pro 51 SFPGIEKKQDAKGVSRGVHFNTKNNALYRV--CGNTLYRNDKEVADIAGMSRV-SMSHSSHSQAICFEGKVKLYRYDGTE 127 (477) Q Consensus 51 ~~PGl~~~~~~~g~~rG~~~~~~~g~ly~V--~G~~Ly~v~~~iG~i~g~g~V-sma~N~~~~~Iv~~g~~~~y~yd~~~ 127 (477) .+||... ....+. ...+. ...|++ .+.++.+++...+.+.-...+ .|.++ ++.+.. ..+.++. T Consensus 244 ~~~~~~~-~~~~~~---~~~~~--~~~~~~~~~~~g~~~~t~v~~~~~~~~~~~~~~~~-----~~~~~~-~t~~~~~-- 309 (823) T protein:vir:95 244 HTEGTSW-DGWGGS---GDDDT--GIEWEYLHSGFGIARITAVNGTTATAEVISYIPSQ-----VVGEDN-ASYKWAK-- 309 (823) T ss_pred cCCcceE-Eeceec---ccccc--eeEEEEEeCCcceEEEEeecceeeeceEeeeeccc-----cccCCc-CCccccc-- Confidence 1111110 000000 00000 112222 222333333322222211111 22221 111111 1122211 Q ss_pred ceEeecCc-ccCCCCCCCceeEEEEecceEEEEeeC--CCeEEEe--------cccCccCcCCCccceEEeecCCceEEE Q lcl|Aclame:pro 128 KALSNWPK-DKYPQYDLGEVIDVCRNRGRYIWLQKG--GERFGVT--------DLEDESKPDRYQPFYRAESQPDGIVSV 196 (477) Q Consensus 128 ~~~~~~~~-~~~p~~~~~~~~dv~~~dgyfV~~~~g--~~~~~iS--------~L~d~s~~~~~l~fatAE~~pD~iv~v 196 (477) ..|.+ .+|| +.|+|..+|.+|.-.. -..++.| ...++..++++-++.-+..+++.|.-+ T Consensus 310 ---~~~~~~~g~P-------s~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~s~~~~~~i~~~ 379 (823) T protein:vir:95 310 ---YAWNSVNGYP-------GTVVYYQQRLYFAASTAFPQTIWASRTGDYKDFGKSNPTQDDDRIIYTYAGRQVNEIRHL 379 (823) T ss_pred ---cccCcCCCCc-------cEEEEEeceEEEEEcCCCCcEEEEeccCCccccccccCCCCCCcEEEEEcCCcceEEEEE Confidence 12222 3455 4799999998875221 0122223 112223456667788888899999999 Q ss_pred EeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEE------EEccC Q lcl|Aclame:pro 197 DAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAV------YLIGA 270 (477) Q Consensus 197 ~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~V------y~~~g 270 (477) ++.+ .|++|.+..- |..+|++.-++-+--..-...=..||.. -.-..+++++++++.. | ..| +..++ T Consensus 380 v~~~-~Lli~t~~~e--~~l~~~~~~~lTP~~~~~~~~s~~g~~~-~~Pv~vg~~~~Fv~~~--g-~~vre~~~~~~~d~ 452 (823) T protein:vir:95 380 IDVG-SLVALTSGGE--YVITGDQNKVLTPSSFAFSSQGSNGSSN-VPPIAVANIALFVQEK--G-SVVRDLAYSFDVDG 452 (823) T ss_pred eecC-cEEEEecCcE--EEEEcCCCcccceeeEEEEEeecccccc-ccceEeCCeEEEEecC--C-CEEEEEEEeeecCc Confidence 9986 5766666643 6667664322211111111112468854 5667799999999764 2 223 23467 Q ss_pred ceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCC---eEEEEecccc--CcceeeEEecCCCcccceEE Q lcl|Aclame:pro 271 GEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPK---HTLCFDGSAS--HQYSQWSLLKSGFYDEPYRA 345 (477) Q Consensus 271 ~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~---~Tw~yD~~t~--~Wher~s~~~~~~~~~r~Ra 345 (477) |+++.+|- -++.+++. +.+ +..+|+.+.++..++.+.| .++.|+-..+ -|| ||-. ....+. T Consensus 453 ~~~~dlT~-~a~hl~~~-~~i-----~~~a~~~~p~~~~~~v~~dG~l~~~ty~~~q~v~aW~-~~~~------~g~~~~ 518 (823) T protein:vir:95 453 YQGNDLTI-LANHLFQK-HSI-----VDWCFSIVPYSSAFCIRDDGKLLVMTYLRDQQVFAWA-PQSS------TGKYES 518 (823) T ss_pred eecchhhh-hhhhhcCC-Cce-----EEEEEecCCCeEEEEEecCCcEEEEEEecccceeeeE-EEec------CCcEEE Confidence 78888862 12333322 111 1224777777777776664 4566765543 687 4644 234555 Q ss_pred EEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEE-Eeece-eccCCceEE-EEEEEEEeCCCCCCceEEEEeeeCc Q lcl|Aclame:pro 346 IDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHL-LYTPM-IKADNARLF-DFELEASTGVAQIADKLFLSVTTDG 422 (477) Q Consensus 346 ~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~-~~tP~-~~~~~~R~~-~~ele~~~Gvgq~~~~v~l~~SdDG 422 (477) .|.+... ....||-+-.. +-+|+....+ +..|. +..+..+++ +..+.. .|....+...-|++-.+. T Consensus 519 ~~~i~~~--------~~d~l~~~v~R--~i~g~~~~yiE~~~~~~~~~~~~~~~lD~~~s~-~g~~~~~~~~~l~~g~~~ 587 (823) T protein:vir:95 519 TCSISEG--------NEDAVYFVVNR--TVNGQTVRYIERLSSRLFTSDEDAFFVDSGLSY-DGRNTSDRTMTITGGSGE 587 (823) T ss_pred EEEecCC--------CCCEEEEEEEe--ccCCeEEEEEEeeccccCCCccceeEEEEEEEe-ecCcccceeeEecCCCCc Confidence 5555321 12344444433 2244443211 22232 222222222 221111 111111111112111111 Q ss_pred cccCcceEec-----------------cCCC-------ceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 423 INYSREQLIE-----------------QNSP-------FQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 423 ~tws~~~~~~-----------------~g~~-------g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) ..|-..+.+. ++.. -.|.++++......-+.. --++|.-...+..+..+..--. T Consensus 588 l~~l~g~~v~~adg~~~~~~~v~g~i~l~~~~~~~~vGl~~~~~i~~~~~~v~~~~-a~~~~~~r~v~a~l~~~~t~~~ 665 (823) T protein:vir:95 588 WDYLAEYTISVSGGAYFTSSDVGAQLQFPYTGADPDTGYEVSKELRCDIISVTSNT-AVVVRANRNVPPSLRNVATTNW 665 (823) T ss_pred ccccCceEEEecCcceECCccceeEEEeCcCCCccccccceEEEEEEeeceeeCCc-eEEEccCCcccceeeeeecccc Confidence 1222222221 1111 113344433333321111 1222222222222222221111 No 19 >protein:vir:1778 Length: 680 # NCBI annotation: tail protein A # Family: family:all:825 # MgeID: mge:38 # MgeName: P60 # Cross-refs: genbank:acc:NP_570344;genbank:gi:18640503;genbank:GeneID:932716 Probab=94.90 E-value=0.0032 Score=34.24 Aligned_cols=296 Identities=9% Similarity=0.093 Sum_probs=125.0 Q ss_pred Cch---------hhcccee------ceeec-ccccccc------cccceeeeeeccccc----cccccccc--ccccccc Q lcl|Aclame:pro 1 MLS---------EVFMPKI------QIPLA-KGLVKDI------KTADYIDALPVNMLA----TPKEVLNA--SGYLRSF 52 (477) Q Consensus 1 ~~~---------~~~M~~~------~iPl~-~G~~~~~------~~~d~i~~~pvNl~~----~~~e~~~s--~~~L~~~ 52 (477) -+. -|++... .+-+. .+.+... ...+...-+|.++-+ +.+..+.+ .-|+..+ T Consensus 318 ~~~~~~~~~~g~~i~i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~Lp~~a~~g~~v~v~~~~~~~~~~Yyv~~ 397 (680) T protein:vir:17 318 GLGTFTAESIGNVIRVRYSDPTRTDEFTMSARGGTSGTGLESIKYSVDTLAELPTKCWNDYQVAVRNTQDTEVDDYYVKF 397 (680) T ss_pred ccCcEEEEECCCEEEEEeccCCCceEEEeeccCCCCceeeeeeeeeeccccccccccCCCcEEEEEeCCCCcccceEEEE Confidence 111 1121100 00000 0111100 011111112222211 00000000 0111111 Q ss_pred cC---------cceeeccchheeeEEEeecCCeEEEEECCeeEeeeeeEEeecccccEEEEeCCCeE--EEEECCCcceE Q lcl|Aclame:pro 53 PG---------IEKKQDAKGVSRGVHFNTKNNALYRVCGNTLYRNDKEVADIAGMSRVSMSHSSHSQ--AICFEGKVKLY 121 (477) Q Consensus 53 PG---------l~~~~~~~g~~rG~~~~~~~g~ly~V~G~~Ly~v~~~iG~i~g~g~Vsma~N~~~~--~Iv~~g~~~~y 121 (477) -. -..|.|..++. ...+-..++=|..+.+++... ...+++..... T Consensus 398 ~~~~~~~~~~~~~~W~E~~~~~------------------------~~~~~~~~tmp~~l~r~~~g~f~~~~~~~~~~~~ 453 (680) T protein:vir:17 398 ETDVEDADVPGSGYWVETVKNG------------------------DDGGLVDDTMPHVLVRNALGDFTFSSLNNSSYGK 453 (680) T ss_pred eccCcccCcccccceeecccCc------------------------ccceeccCcceEEEEEccCceeEEEeeccccccc Confidence 00 00111110000 001111222233333332211 11112111111 Q ss_pred EEEcccceEeecCcccCCCCC-CC-ceeEEEEecceEEEEeeCCCeEEEe---cccCc-------cCcCCCccceEEeec Q lcl|Aclame:pro 122 RYDGTEKALSNWPKDKYPQYD-LG-EVIDVCRNRGRYIWLQKGGERFGVT---DLEDE-------SKPDRYQPFYRAESQ 189 (477) Q Consensus 122 ~yd~~~~~~~~~~~~~~p~~~-~~-~~~dv~~~dgyfV~~~~g~~~~~iS---~L~d~-------s~~~~~l~fatAE~~ 189 (477) .| +.......+.+..|.+- .+ .+.+|+|..+|++|.-| ..++.| ++.|. ..+|++.+++.+..+ T Consensus 454 ~~--~~r~~Gdd~tnp~psF~~~G~~p~~v~f~q~RL~f~s~--~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~ 529 (680) T protein:vir:17 454 TW--ADRSVGSEDTNPHPTFTESGNGIYGMFMYKNRLGFLTQ--DAVIMSQVGDYFNFYATSGVTISDADPIDMATSDTK 529 (680) T ss_pred cc--cccccCCcccCCCcccccCCCCceEEEEEcceEEEeeC--CeEEEEccCCcccccccccccCCCCccEEEEEcCCc Confidence 11 11111111112233321 12 37799999999988643 334434 22221 225666778888888 Q ss_pred CCceEEEEeeCCEEEEEecceEEEEEecCCC-CCceeeEEecccceEeeecccchhheecCCeEEEEecccccC-cEE-- Q lcl|Aclame:pro 190 PDGIVSVDAWRDLIVCFGSSSIEYFTLTGSA-DTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQ-PAV-- 265 (477) Q Consensus 190 pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~-~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~-~~V-- 265 (477) ++.|.-++++++.|+||... -| |..+|+. .....-.... ..=..+|...-.-..++++++++++. |. -.| T Consensus 530 ~~~i~~~v~~~~~L~l~t~g-~q-~~ls~~~~~lTP~~~~i~--~~s~~~~~~~~~Pv~vG~~v~Fv~~~--g~~s~vre 603 (680) T protein:vir:17 530 PVKLEAAISSTSGAILFGNQ-AQ-FRLSSPDESFGPKTATLD--KISNYTYESKADPVQTGVSMIFPTNM--GTYSSVYE 603 (680) T ss_pred ceeeeEEeecCCcEEEEecC-eE-EEEecCCceecceeEEEE--EEEeecccCCCCceEeCCeEEEeecC--CCcceEEE Confidence 89999999999999888775 33 6666642 2321111111 11135898877788899999999865 22 124 Q ss_pred ----EEccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcC-CeEEEEe-------ccccCcceeeEE Q lcl|Aclame:pro 266 ----YLIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLP-KHTLCFD-------GSASHQYSQWSL 333 (477) Q Consensus 266 ----y~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP-~~Tw~yD-------~~t~~Wher~s~ 333 (477) +..++|+++.+|- -++..|++ .+. .+.+++.+.+.++....- +.-++|- -.-.-|| ||-+ T Consensus 604 ~~y~~~~d~y~a~DlT~-~a~hl~~g--~v~----~~~~~~~~~~~~~~~~~~~~~l~~~~yl~~~~e~~v~aW~-rw~~ 675 (680) T protein:vir:17 604 LSTESAKGTPVIEDSSR-VIPRLIPS--GLT----WSTASMNNDTVFFGNAKKGRNVYVFRFFNEGQERKVAGWT-TWYY 675 (680) T ss_pred EeeeeccCceehhhHHH-HHHHhcCC--ceE----EEEeeCCCCeEEEEEEcCCCEEEEEEEeeCCCceEEEEEE-EEec Confidence 3445677777743 35555543 222 244677888876666544 3444542 1123576 5655 Q ss_pred ecCCCcccce Q lcl|Aclame:pro 334 LKSGFYDEPY 343 (477) Q Consensus 334 ~~~~~~~~r~ 343 (477) -.+ + | T Consensus 676 ~~~---d--~ 680 (680) T protein:vir:17 676 EDQ---D--H 680 (680) T ss_pred CCC---C--C Confidence 222 1 2 No 20 >protein:vir:99677 Length: 794 # NCBI annotation: Tail tubular protein B # Family: family:all:825 # MgeID: mge:1523 # MgeName: VP4 # Cross-refs: genbank:acc:YP_249591;genbank:gi:68299742;genbank:GeneID:3799992 Probab=94.71 E-value=0.0037 Score=33.92 Aligned_cols=448 Identities=12% Similarity=0.137 Sum_probs=157.6 Q ss_pred Cchhhcc------------ceeceeeccccccc-ccccceeee-eeccccccccccccccc--ccccccCcceeecc--- Q lcl|Aclame:pro 1 MLSEVFM------------PKIQIPLAKGLVKD-IKTADYIDA-LPVNMLATPKEVLNASG--YLRSFPGIEKKQDA--- 61 (477) Q Consensus 1 ~~~~~~M------------~~~~iPl~~G~~~~-~~~~d~i~~-~pvNl~~~~~e~~~s~~--~L~~~PGl~~~~~~--- 61 (477) +..--+= +.-..|........ ....++++. +..++-..--......+ +... |+-....+. T Consensus 157 v~~g~y~~~y~v~i~gs~ta~~~tp~~~~~~~~~~~s~~~ia~~l~~~l~~~g~~v~~~~g~~~i~~-~~~~~v~t~s~~ 235 (794) T protein:vir:99 157 IRGGQYGRTYRIKVNGSVEASFETPLGDQVAHAKQIDIAYIIDQLAAGLINKGWAVTKGSGYFYFSK-SGSVIINSLEVE 235 (794) T ss_pred eccCCCCceEEEEecCCcccceeeccCcccccccccchhhhhhhhHhhhhcccceEEeCCeEEEEEe-cCCceeEEEEee Confidence 1000000 01111221111110 001112221 11111000000000000 0000 010000000 Q ss_pred chh-eeeE---E----------EeecCCeEEEEECC----------------eeEeeeeeEEeecccccEEEEeCCCeEE Q lcl|Aclame:pro 62 KGV-SRGV---H----------FNTKNNALYRVCGN----------------TLYRNDKEVADIAGMSRVSMSHSSHSQA 111 (477) Q Consensus 62 ~g~-~rG~---~----------~~~~~g~ly~V~G~----------------~Ly~v~~~iG~i~g~g~Vsma~N~~~~~ 111 (477) .|- .+++ . -...+|....|.++ +.++-+...|.+.|...-.|.+. T Consensus 236 ~g~~~t~~~~~~~~v~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p~~----- 310 (794) T protein:vir:99 236 DGYNGQLAWGIINDVQKTTQLPVYAPNNYIIRVSGDPTLNQDDYYVRFDASRNVWTECPAPNIKADYNKATMPHV----- 310 (794) T ss_pred cCCCCceeeEEeeeccceeecccCCCCCeEEEEeccCCCCCCceEEEEEcCCceEEeeccceeecceeccceEEE----- Confidence 000 0000 0 00113333333321 11111111122222222222222 Q ss_pred EEECCCcceEEEEc---ccceEeecCcccCCCCCCCceeEEEEecceEEEEeeCCCeEEEec---ccCc-------cCcC Q lcl|Aclame:pro 112 ICFEGKVKLYRYDG---TEKALSNWPKDKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVTD---LEDE-------SKPD 178 (477) Q Consensus 112 Iv~~g~~~~y~yd~---~~~~~~~~~~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS~---L~d~-------s~~~ 178 (477) .+......|.+.- +.......+.+.+|.+..-.+.+|+|..+|++|.-+ ..++.|. +.|. ..+| T Consensus 311 -~v~~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~is~v~f~q~RL~f~~~--~~v~~Srtgd~~nF~~~t~~~~~Dd 387 (794) T protein:vir:99 311 -LIREADGTFTFKQADWTHRAAGDDETNPYPSFIGNSINDIFFFRNRLGFLSG--ENVILSGSGNYFNFFPESVAVLTDT 387 (794) T ss_pred -EeccCCCceeEeeccccccccCCcccCCCccccCcceeEEEEEeeeEEEecC--CeEEEEecCCccccccccccCCCCC Confidence 1111111122111 111111112234555444456789999999988643 3344342 2221 2356 Q ss_pred CCccceEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecc Q lcl|Aclame:pro 179 RYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQ 258 (477) Q Consensus 179 ~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d 258 (477) ++-+++.+..+++.|.-++++++.|+||....- |..+|+......-....+ .=..+|...-.-..+++++++++.. T Consensus 388 D~I~~~~~~~~~~~i~~~v~~~~~L~l~t~~~q--~~l~~~~~lTP~~~~~~~--~s~~~~~~~~~Pv~vg~~v~f~~~~ 463 (794) T protein:vir:99 388 DPIDVAVSTNRISILKYAVPFSEELILWSDQAQ--FVLSSDGGLTPTTIRLDL--TTEFEVTEQARPYGIGRGVYFVSPR 463 (794) T ss_pred ccEEEEecCCcceeeEEEeecCCcEEEEecCcE--EEEeCCCcccceeEEEEE--EEEeeccCCCCceEeCCeEEEEecC Confidence 677788888888888889999999988866654 777776533321111111 1135898888889999999999876 Q ss_pred cccCcEEE------EccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCC-eE--EEEec--cc--- Q lcl|Aclame:pro 259 STGQPAVY------LIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPK-HT--LCFDG--SA--- 324 (477) Q Consensus 259 ~~g~~~Vy------~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~-~T--w~yD~--~t--- 324 (477) ...-..+. ..++|+++.+|- -++..|++.. .+ +.+++.+.+.+.....-+ .- +.|.- .. T Consensus 464 g~~~~v~r~~~~~~~~d~y~a~Dlt~-~~~hl~~~~~-~~-----~~a~~~~~~~~v~~~~~~g~l~~~~y~~~~~eq~v 536 (794) T protein:vir:99 464 AKFSSVRRFYAVQDVTQVKNAEDISA-HVPYYVENGV-FK-----MSGSSTENFLTILTEGNEQRVYFYKFLYLQEQLVQ 536 (794) T ss_pred CCeeEEEEeeeeccccCceehhhHHH-HHHHhcCCCe-EE-----EEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEE Confidence 32111222 235677777743 3455554311 11 235778887766655553 33 34432 11 Q ss_pred cCcceeeEEecCCCcccceEEEEEEE-eCCeEEEEEcCCC-eEEEEc--CCCcccCCCEe-eEE----Eee-c--eeccC Q lcl|Aclame:pro 325 SHQYSQWSLLKSGFYDEPYRAIDFMF-FDNQITVGDKKEG-VLGHLI--FNASNQYEQQT-EHL----LYT-P--MIKAD 392 (477) Q Consensus 325 ~~Wher~s~~~~~~~~~r~Ra~~~~~-~~g~~~vGD~~~g-~l~~Ld--~~~~td~G~~i-~~~----~~t-P--~~~~~ 392 (477) .-|| ||-+ ..+++..|+++ .+.-|++-+..++ .|-+++ .+..+..+++. .++ ..+ | ..+++ T Consensus 537 ~aW~-~~~~------~g~~~~~~~~~~~d~l~~~v~r~~~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~ 609 (794) T protein:vir:99 537 QSWS-HWDF------GVNCRVLCCDMIGAVMHLIIDSPSGVLMEKIEFTQNTKDYPDEPYRLYVDRKIEYTFPEGSYNDD 609 (794) T ss_pred EeEE-EEEc------CCCeEEEEEEEcCCEEEEEEEeCCCEEEEEEEeeeCCCCCCCcccceeeeeeeeeeecccccccC Confidence 2677 4655 23466666655 3444556555553 333333 11111111111 000 000 0 00000 Q ss_pred CceEEEEEEEEEeCCCCCCceEEEEeeeCccc---------cC-cc--eEeccCCC-------ceeceeEEEEEe----- Q lcl|Aclame:pro 393 NARLFDFELEASTGVAQIADKLFLSVTTDGIN---------YS-RE--QLIEQNSP-------FQYDKRILWRRI----- 448 (477) Q Consensus 393 ~~R~~~~ele~~~Gvgq~~~~v~l~~SdDG~t---------ws-~~--~~~~~g~~-------g~~~~r~~~~Rl----- 448 (477) . -...+.+....|...-+-+ .+.+-.||.. |- .. ..++...+ -.|..++..-++ T Consensus 610 ~-~~~~~~~~~~~g~~~l~g~-~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~~~~~~~~ 687 (794) T protein:vir:99 610 D-FKTRVKLKDIYGSTPANGQ-YVFISLGGVTFTFDPPAGGWQANDGLIEFDGDLRGTKFFVGEAYTFLYEFSKFLIKTT 687 (794) T ss_pred c-ceeEEeccccccccccCCc-eEEEEeCCceeeeecccceEecCccEEEecCCCCCcEEEEeeeeeEEEeecceEEeec Confidence 0 0000011111111100000 0111222221 00 00 00111111 011222211111 Q ss_pred ---e--------e---------ccceeeEEEEEEeeCCee-EEEEEEEeC Q lcl|Aclame:pro 449 ---G--------R---------VRKNIGFKIRIITKSPVT-LSDLSIRME 477 (477) Q Consensus 449 ---G--------~---------~~~~vgf~~r~~~~~~v~-l~~~~~~~E 477 (477) | + ..+=.+|++++....+-. ......++- T Consensus 688 ~~~g~~~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~ 737 (794) T protein:vir:99 688 DTADGVATEDIGRLQLRRAWVNYDKSGNFRVEVNNQGRTFTYNMTGNRLS 737 (794) T ss_pred CCCCceeeeccceEEEEEEEEEeecccceEEEECCCccceeeeccccccc Confidence 0 0 001112333333221110 000000000 No 21 >protein:vir:80253 Length: 777 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1879 # MgeName: LKA1 # Cross-refs: genbank:acc:YP_001522886;genbank:gi:158345179;genbank:GeneID:5687516 Probab=94.50 E-value=0.0042 Score=33.59 Aligned_cols=438 Identities=11% Similarity=0.029 Sum_probs=153.1 Q ss_pred Cchhh--------------cccee------ceeecccccc-------------ccc-ccceeeeeecccccccccccccc Q lcl|Aclame:pro 1 MLSEV--------------FMPKI------QIPLAKGLVK-------------DIK-TADYIDALPVNMLATPKEVLNAS 46 (477) Q Consensus 1 ~~~~~--------------~M~~~------~iPl~~G~~~-------------~~~-~~d~i~~~pvNl~~~~~e~~~s~ 46 (477) |+++. ++... +|++...... ..+ ...++... -+....++ T Consensus 133 ~~~~~~~~~~~~~~~~~~~~v~~~~~g~~y~i~i~~~~~~~~~t~~~~t~~~~~~~~~~~~ia~~-------L~~~~~~~ 205 (777) T protein:vir:80 133 TQLWSGASAYPDPTRAGYLYVVAGAFSKQYRLSITNQVTGVTTSVDVTTSATEASQATGEYVITQ-------LRTAAEAD 205 (777) T ss_pred eeecccCCCccCcccceEEEeeccCCCceeeEeecCCcCceeEEEecCCcccccccccchhhhhh-------hhhhhccc Confidence 33221 11111 1222210000 000 00011000 00000111 Q ss_pred cccccccCcceeec----------------cchhee----eEEEee----------cCCeEEEE----ECCeeE-eee-- Q lcl|Aclame:pro 47 GYLRSFPGIEKKQD----------------AKGVSR----GVHFNT----------KNNALYRV----CGNTLY-RND-- 89 (477) Q Consensus 47 ~~L~~~PGl~~~~~----------------~~g~~r----G~~~~~----------~~g~ly~V----~G~~Ly-~v~-- 89 (477) .-+-+.||.+.... .+|... ..+.+. .+...+++ .+..-| +-+ T Consensus 206 ~~~~s~~~~~~~~~g~~~~i~~~~~~~~t~~~g~~~~~~~~~~~v~~~~~lp~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 285 (777) T protein:vir:80 206 ATIGTAAGFAYYQDGAYLYVTAPEAIAVSTDSGSNFLRASNAASIRDAAELPAKLPADADGFIIATGAAKNKTYFRWVDL 285 (777) T ss_pred cceeecCceEEEeCCcEEEEEecCceeEecCCcCccceeeeeEEEeeccccccccccccceEEEeCCCCCCceEEEEEcc Confidence 11111111111000 000000 000000 00000000 000000 000 Q ss_pred -------eeEEeecccccEEEEeCCCeEEEEECCCcceEEEEcccceEe---ecCcccCCCCCCCceeEEEEecceEEEE Q lcl|Aclame:pro 90 -------KEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKALS---NWPKDKYPQYDLGEVIDVCRNRGRYIWL 159 (477) Q Consensus 90 -------~~iG~i~g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~~---~~~~~~~p~~~~~~~~dv~~~dgyfV~~ 159 (477) ...|.+.+ ...| .. .++..+ ..|.+......-. ..+...+|.+..-.+.+|+|..+|++|. T Consensus 286 ~~~w~e~~~~~~~~~--~~t~----p~-~l~~~~--~~~~~~~~~w~~r~~gd~~tn~~Psf~g~~i~~v~f~q~RL~f~ 356 (777) T protein:vir:80 286 ERKWDEDASRGAQAE--LIDM----PL-RITYSA--PNFSLTALNYERRASGDATSNPALKFTEQGISGMTTMQGRLVLL 356 (777) T ss_pred CcEEEEeeccccccc--cccc----ce-EEEecC--CceEeeccCCccccccccccCCCceecCCceeEEEEEcceeeee Confidence 00000000 0000 00 011111 1122211111111 1122456655555677899999999886 Q ss_pred eeCCCeEEEe---cccCc-------cCcCCCccceEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEe Q lcl|Aclame:pro 160 QKGGERFGVT---DLEDE-------SKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIH 229 (477) Q Consensus 160 ~~g~~~~~iS---~L~d~-------s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~ 229 (477) -| ..++.| ++.|. ..+|++-+++.+..+++.|.-++++++.|+||....- |..+|+........+. T Consensus 357 ~~--~~v~~Srtgd~~nF~~~s~~~~~DdDpI~~~~ss~~~~~i~~~v~~~~~L~i~T~~~e--~~l~~~~~lTP~~~~~ 432 (777) T protein:vir:80 357 AG--EYVCMSASGNPLRWFRASVSTQSDDDPIEVAATAPVASPYEYAVAFNKDLVLFAKTHQ--GLVPGANLLTSRNATA 432 (777) T ss_pred cC--CeEEEEeccCccccccccccCCCCCccEEEEEcCCcceeeeeeeecCCcEEEEecCce--EEEeCCCcccceeEEE Confidence 43 334434 22221 2356667778888888888889999999988876665 7778865443221111 Q ss_pred cccceEeeecccchhheecCCeEEEEecccccCcEEE-------EccCceeeecCCHHHHHHHHhcCccccceeEEEEEE Q lcl|Aclame:pro 230 QAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVY-------LIGAGEKNKISTATIDKIIRYYSADELAASFMESIR 302 (477) Q Consensus 230 ~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy-------~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~ 302 (477) .+ .=..+|.+.-.-..++++++++++..-.--.|+ ..++|+++.+|-| ++..|++ .+. .-+++ T Consensus 433 ~~--~s~~~~~~~~~Pv~vG~~v~Fv~~r~g~~s~v~e~~~~~~~~d~y~a~Dlt~~-~~hl~~~--~v~-----~~a~s 502 (777) T protein:vir:80 433 AV--VTEYSFQNSCSPVVAGRTVFFASPRSGPWSAVWEMLPSQYTDAQVEASDSTSH-LPKYIAG--PVR-----FLATS 502 (777) T ss_pred EE--EEeeccCCCCCceEeCCeEEEEecCCCceeEEeeeeecccccCceehhHHHHH-HHHhcCC--ceE-----EEEEc Confidence 11 113588887777899999999985321101233 3356788888544 4555643 222 22577 Q ss_pred ECCEEEEEEEcCC-eEEE--Eecc-----ccCcceeeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcc Q lcl|Aclame:pro 303 FDNHELLLLHLPK-HTLC--FDGS-----ASHQYSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASN 374 (477) Q Consensus 303 ~~GH~fyvitfP~-~Tw~--yD~~-----t~~Wher~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~t 374 (477) .+-+....+..-+ .-+| |.-. -.-|| ||-+ ..+.++.|++ .+.-|++=.++ +.+|.-..+... T Consensus 503 ~~p~~v~~~~~~dg~l~~~ty~~~~~e~~v~aW~-r~~~------~g~v~~v~~i-~d~l~~iv~r~-~~~~le~~~~~~ 573 (777) T protein:vir:80 503 STTSIVVVGTSNLRELVVHEYLWQGGEKVHAAWH-KWSF------PQDITGAYFR-GDRLILLFHVA-GRVILGELFMQR 573 (777) T ss_pred CCCceEEEEEcCCCeEEEEEEeecCCceEEEeeE-Eecc------CCcEEEEEEE-CCEEEEEEEcC-CeEEEEEEeecc Confidence 7777777777664 3344 4211 12677 4544 2345654443 44555554443 333332222222 Q ss_pred cCCCE---eeEEEe---ece-eccCCce-EE--------EEEEEEEeCCCCCCceEEEEeeeCccccC-----c--ceEe Q lcl|Aclame:pro 375 QYEQQ---TEHLLY---TPM-IKADNAR-LF--------DFELEASTGVAQIADKLFLSVTTDGINYS-----R--EQLI 431 (477) Q Consensus 375 d~G~~---i~~~~~---tP~-~~~~~~R-~~--------~~ele~~~Gvgq~~~~v~l~~SdDG~tws-----~--~~~~ 431 (477) +.+.+ ..++.. ... .+..... .+ ...+.+..|....-..-...-..||.++. + ...+ T Consensus 574 ~~d~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~v 653 (777) T protein:vir:80 574 LGDAQSIPGGFLDLYRVGAANADEEVAIPAFAADLYPEDSTFAYKLSGEFQSLGQRCGDRRVDGATVYIKVVGAQAGDQY 653 (777) T ss_pred CCCCcccceeeeeeeeeeeeeeCCccceeEeeccccCCcceeEEEecCcccccceeeeeEEeCCceeeEEEcCCCCCCEE Confidence 22222 111111 000 0000000 00 00011111111000000000011111110 0 0011 Q ss_pred ccCCCce------------------eceeEEEEEe-eeccceeeEEEEEEeeCCe----eEEEEEEE-----eC Q lcl|Aclame:pro 432 EQNSPFQ------------------YDKRILWRRI-GRVRKNIGFKIRIITKSPV----TLSDLSIR-----ME 477 (477) Q Consensus 432 ~~g~~g~------------------~~~r~~~~Rl-G~~~~~vgf~~r~~~~~~v----~l~~~~~~-----~E 477 (477) -+|.+.+ ...|++.+|+ =+..+-.+|++++....+- .+.+..+. +. T Consensus 654 ~VGl~y~s~~~~~~~~~~~~~g~~~~~~r~~i~r~~~~~~~sg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~g 727 (777) T protein:vir:80 654 RIGLRYLSKLGPTRPILRDPNGVPITTERTQLHRLTWSLDSTGEVTFRVADQARGESAYTTTPLRLYSRDLGAG 727 (777) T ss_pred EEeeeeEEEEEeCceEEeCCCCceeeecCeEEEEEEEEeeccccEEEEEcCCCCcceeeeecCceecccccccc Confidence 1111110 1112222210 0000111334443332221 11111110 10 No 22 >protein:vir:94713 Length: 785 # NCBI annotation: tail tube # Family: family:all:825 # MgeID: mge:1528 # MgeName: K1F # Cross-refs: genbank:acc:YP_338122;genbank:gi:77118200;genbank:GeneID:3707736 Probab=94.32 E-value=0.0047 Score=33.33 Aligned_cols=439 Identities=12% Similarity=0.060 Sum_probs=174.9 Q ss_pred Cchhhccceeceeec----------cccccc--cc--ccceeeeee----cccccccccccccccccccccCcceeecc- Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLA----------KGLVKD--IK--TADYIDALP----VNMLATPKEVLNASGYLRSFPGIEKKQDA- 61 (477) Q Consensus 1 ~~~~~~M~~~~iPl~----------~G~~~~--~~--~~d~i~~~p----vNl~~~~~e~~~s~~~L~~~PGl~~~~~~- 61 (477) +-..-|....+|=+- .+.... .. ..+++...+ ++..+.-.-...+.......|.-....+. T Consensus 151 i~~g~y~~~y~i~i~g~~~at~~t~~~s~a~~s~~~~s~~~i~~~l~~~l~a~~t~~t~~~~g~~i~i~a~s~t~~~~~s 230 (785) T protein:vir:94 151 LRGGQYGRTLKVGINGGVKVSHKLPAGNDAENDPPKVDAQAIGAALRDLLVTAYPTFTFDLGSGFLLITAPSGTDINSVE 230 (785) T ss_pred ecccccceeEEEeeCCcceeEEEEccCccccccccccchHHHHHHHHHHhhccccceeEEecCcEEEEEecCCcccccee Confidence 222222222222110 011100 00 000110000 00000000000000001011110100000 Q ss_pred --c---hh-eeeEE----------EeecCCeEEEEECCe-----eEeee--eeEE---eecccccEEEEeCCCeEEEEEC Q lcl|Aclame:pro 62 --K---GV-SRGVH----------FNTKNNALYRVCGNT-----LYRND--KEVA---DIAGMSRVSMSHSSHSQAICFE 115 (477) Q Consensus 62 --~---g~-~rG~~----------~~~~~g~ly~V~G~~-----Ly~v~--~~iG---~i~g~g~Vsma~N~~~~~Iv~~ 115 (477) . +. ...+. -...+|.+..|.|.. =|.+. +.-| +..+-|.+.--++.+-...++. T Consensus 231 ~~~~~~~t~~~~~~~~~~~~~~Lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~g~w~e~~~~g~~~~~~~~tmp~~l~~ 310 (785) T protein:vir:94 231 TEDGYANQLISPVLDTVQTISKLPLAAPNGYIIKIQGETNSSADEYYVMYDSNTKTWKETVEPGVVTGFDNTTMPHALVR 310 (785) T ss_pred eecccCCeEEEEEEeeccceeccccccCCCCEEEEEccCCCCccceEEEEEcCCceEEEecccceeeeeeccccceEEEe Confidence 0 00 00000 012344444444421 01111 1111 1223333333333322222221 Q ss_pred CCcceEEEEcccceEe---ecCcccCCCCCCCceeEEEEecceEEEEeeCCCeEEEe---cccCc-------cCcCCCcc Q lcl|Aclame:pro 116 GKVKLYRYDGTEKALS---NWPKDKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVT---DLEDE-------SKPDRYQP 182 (477) Q Consensus 116 g~~~~y~yd~~~~~~~---~~~~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS---~L~d~-------s~~~~~l~ 182 (477) ....-|.+.-....-. ..+.+.+|.+..-.+.+|+|..+|++|.-|. .++.| ++.|. ..+|++-+ T Consensus 311 ~~~~~~~~~~~~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~~--~v~~Srtgd~~nF~~~t~~~~~DdD~i~ 388 (785) T protein:vir:94 311 QSDGSFEFKALDWSKRGAGNDDTNPMPSFVDATINDVFFYRNRLGFLSGE--NVIMSRSASYFAFFPKSVATLSDDDPID 388 (785) T ss_pred ccCCceEEeccccccccCCCcccCCcceecccccceEEEEeceEEEecCC--eEEEEccCCcccCccccccCCCCCccEE Confidence 1111122221111111 1222445554444567899999999886432 33334 22221 22556677 Q ss_pred ceEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccC Q lcl|Aclame:pro 183 FYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQ 262 (477) Q Consensus 183 fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~ 262 (477) ++.+..+++.|.-++++++.|+||....- |..+|+......-....+ .=..+|.+.-.-..+++++++++.... - T Consensus 389 ~~~~~~~~~~i~~~v~~~~~L~l~T~~~e--~~l~~~~~lTP~~~~~~~--~s~~~~~~~~~Pv~vg~~v~f~~~~g~-~ 463 (785) T protein:vir:94 389 VAVSHPRISILKYAVPFSEQLLLWSDEVQ--FVMTSSGVLTSKSIQLDV--GSEFALGDNARPFAVGRSVFFSAPRGS-F 463 (785) T ss_pred EEecCCcceeeEEEeecCCcEEEEecCcE--EEEcCCCcccceeEEEEE--EEeeeccCCCCceEeCCeEEEEecCCC-e Confidence 78888888899989999999988866554 777887544322111111 113589888888899999999986421 1 Q ss_pred cEEEE-------ccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCC-eEEE--Ee-----ccccCc Q lcl|Aclame:pro 263 PAVYL-------IGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPK-HTLC--FD-----GSASHQ 327 (477) Q Consensus 263 ~~Vy~-------~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~-~Tw~--yD-----~~t~~W 327 (477) -.|++ .++|+++.+ |.-+++.|.+.. .+ +.+++.+.+.++....-+ .-++ |. -.-.-| T Consensus 464 ~~v~r~~~~~~~~d~y~~~dl-t~~~~~~~~g~~-~~-----~~a~~~~~~~~~~~~~~~g~l~~~~y~~~~~e~~v~aW 536 (785) T protein:vir:94 464 TSIKRYFAVADVSDVKDADDT-TGHVLSYIPNGV-FD-----IQGTGTENYICVNSTGAYNRIYIYKFLFKDSVQLQASW 536 (785) T ss_pred eEEEeeeeecccccceehhhH-HHHHHHhcCCCc-EE-----EEEecCCCcEEEEEEcCCCEEEEEEEeecCCceEEEEE Confidence 12322 345777777 334555564322 11 225777887766555543 4334 32 112356 Q ss_pred ceeeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEe-eceecc--CCceEE-EEEEEE Q lcl|Aclame:pro 328 YSQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLY-TPMIKA--DNARLF-DFELEA 403 (477) Q Consensus 328 her~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~-tP~~~~--~~~R~~-~~ele~ 403 (477) | ||-+ ...+...+++.. +..+|.+-.. .+|..++++.. .+.+.. ...|++ +..++. T Consensus 537 ~-r~~~------~~~~~~~~~~~~----------~d~~~~vv~r---~~g~~~~~ie~~~~~~d~~~~~~~~~lD~~~~~ 596 (785) T protein:vir:94 537 S-HWEF------PKDDKILASASI----------GSTMFIVRQH---QGGVDIEHLKFIKEATDFPSEPYRLHVDSKVSM 596 (785) T ss_pred E-EEEe------CCCeEEEEEEEe----------CCEEEEEEEc---CCCEEEEEEEeecccCCCCCcceeEEeeeeeEE Confidence 6 4533 122344444443 3556666554 46777776643 333322 222332 222222 Q ss_pred E--eC-------------------CCCCCceEEEEeeeCccccCcceEeccCCC-----ceeceeEEEEEeeecccee-- Q lcl|Aclame:pro 404 S--TG-------------------VAQIADKLFLSVTTDGINYSREQLIEQNSP-----FQYDKRILWRRIGRVRKNI-- 455 (477) Q Consensus 404 ~--~G-------------------vgq~~~~v~l~~SdDG~tws~~~~~~~g~~-----g~~~~r~~~~RlG~~~~~v-- 455 (477) . .| ....+-+.++- --||.... +..+.-+.. |-+....+ .+|.--.-- T Consensus 597 ~~~~~~~~~~~~~t~~~~~~~~~g~~~leg~~v~v-~adG~~~~-~~~v~~~~~tl~~~g~~~~~~v--~vGl~y~~~~~ 672 (785) T protein:vir:94 597 VIPIGSFNADTYKTTVDIGAAYGGNAPSPGRYYLI-DSQGAYLD-LGELTSISTVITLNGDWSGRTV--FIGRSYLMSYK 672 (785) T ss_pred EecCcceeccccccccccccccccCCccCCeEEEE-eeCCcCcc-CceEcCCCcEEEecCCCCCceE--EEeeeeeEEEe Confidence 1 11 11111122211 23443322 111222211 00111111 123111000 Q ss_pred --eEEEEEEe--------eCCeeEEEEEEEeC Q lcl|Aclame:pro 456 --GFKIRIIT--------KSPVTLSDLSIRME 477 (477) Q Consensus 456 --gf~~r~~~--------~~~v~l~~~~~~~E 477 (477) -+.+|... ..|+-|..++++++ T Consensus 673 ~~~~~~~~~~~~~~~~~~~gr~~l~r~~~~~~ 704 (785) T protein:vir:94 673 FSRFLIKIEDDSGTQSEDTGRLQLRRAWVNYR 704 (785) T ss_pred ecceeEEecCCCcccccccccEEEEEEEEEee Confidence 00111111 14566778888887 No 23 >protein:vir:8887 Length: 808 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:161 # MgeName: gh-1 # Cross-refs: genbank:acc:NP_813776;genbank:gi:29366731;genbank:GeneID:1258831 Probab=93.81 E-value=0.0063 Score=32.64 Aligned_cols=450 Identities=10% Similarity=0.063 Sum_probs=167.9 Q ss_pred Cchhhccceeceeecccccc------cccccceeeee----------ecccccc----------cccc------------ Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVK------DIKTADYIDAL----------PVNMLAT----------PKEV------------ 42 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~------~~~~~d~i~~~----------pvNl~~~----------~~e~------------ 42 (477) +---+|+...+.|+..+... +.....++..+ .||-.+. +..+ T Consensus 119 vaD~~fi~n~~~~~~~~~~~~~~~~~~~~~~~~~~vr~g~y~~~y~i~i~g~~s~~~~t~t~~~~~~s~~~v~~~~~~~~ 198 (808) T protein:vir:88 119 VADYTFVVNRNTVCQMGSTLTHAAYPRLDGRAIINVRGGQYGRTLSITINGDGTGSSPQASIKMPNGSAEKVPAGDPYAG 198 (808) T ss_pred EcCEEEEEcCCcceeecccccccCCCCCCccEEEEEcccccCceEEEEEecCCcceeeeEeEEEccCcccceeeccceee Confidence 22233444444444322221 11111122211 1221100 0000 Q ss_pred ---cc-cccccccccCcceeeccchheeeEEEeecCCeEEEEE--CCeeEeeeeeEEeecccccEE-------------E Q lcl|Aclame:pro 43 ---LN-ASGYLRSFPGIEKKQDAKGVSRGVHFNTKNNALYRVC--GNTLYRNDKEVADIAGMSRVS-------------M 103 (477) Q Consensus 43 ---~~-s~~~L~~~PGl~~~~~~~g~~rG~~~~~~~g~ly~V~--G~~Ly~v~~~iG~i~g~g~Vs-------------m 103 (477) .+ +...+.. ..|.......+...|..+....+.+|.+. +.+...++++-|. ++..... . T Consensus 199 ~~~~~~~~~~~ia-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~a~~~~~~~~t~~g~-~~~~~~~~~~~v~~~~~lp~~ 276 (808) T protein:vir:88 199 MNQVDMTDASWIA-AELARQLTVSLGGSGWSFQAGTGWILINAPANDNVRQIATKDGY-ADTLLSGFIYQVQTFTKLPAN 276 (808) T ss_pred cccCCccccccch-hhheeeeeecccccceEEEeccceEEEEeccCceeEEEcccCCc-Ccceeeeeeeeccceeecccc Confidence 00 0000000 00000000111111221121222222221 1111111110000 0000000 0 Q ss_pred EeCCCeEEEEECCCc--c--eEEEEcc-----------------------------cceEe----ecC--------cccC Q lcl|Aclame:pro 104 SHSSHSQAICFEGKV--K--LYRYDGT-----------------------------EKALS----NWP--------KDKY 138 (477) Q Consensus 104 a~N~~~~~Iv~~g~~--~--~y~yd~~-----------------------------~~~~~----~~~--------~~~~ 138 (477) +.++....|...++. + .++|+.. ..+++ .|. .+.+ T Consensus 277 ~p~g~~v~i~~~~~~~~~~~yv~~~~~~~~w~e~~~~~~~~~~~~~tmp~~lv~~~~~~~~~~~~~w~~r~~Gd~~tnp~ 356 (808) T protein:vir:88 277 APPGYLVEITGESARSGDNYWVQYDASGKVWKETAKPKIIAGFNNATLPHALVRAADGQFDWTPLTWDGRNAGDDDTNPM 356 (808) T ss_pred CCCCcEEEEEecCCCCCceeEEEEEcCCeEEEEeeeccceeeecccceeEEEEecCCceEEEEecccccccccccccCcc Confidence 001111111111000 0 0111111 11111 122 1346 Q ss_pred CCCCCCceeEEEEecceEEEEeeCCCeEEEe---cccCc-------cCcCCCccceEEeecCCceEEEEeeCCEEEEEec Q lcl|Aclame:pro 139 PQYDLGEVIDVCRNRGRYIWLQKGGERFGVT---DLEDE-------SKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGS 208 (477) Q Consensus 139 p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS---~L~d~-------s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~ 208 (477) |.+....+.+|+|..+|++|.-| ..++.| ++.|. ..+|++-+++.+..+++.|.-++++++.|+||.. T Consensus 357 psf~g~~~~~v~f~q~RL~f~~~--~~v~~Srtgd~~nF~~~t~~~~~DdD~i~~~~~~~~~~~i~~~v~~~~~L~i~T~ 434 (808) T protein:vir:88 357 PSFVGATINDVFFFRNRLGFLSG--ENVVMSRTSKYFNFFPSSVATLSDDDPIDVAISHNRISILKYAVPFSEQLLLWSD 434 (808) T ss_pred ceecCCceeEEEEEcceEEEeeC--CeEEEEeccCcccccCCcccCCCCCccEEEEecCCccceeeEEeecCCcEEEEec Confidence 66555678899999999988653 334334 22222 1245667777777788888889999999988866 Q ss_pred ceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEEEE-------ccCceeeecCCHHH Q lcl|Aclame:pro 209 SSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVYL-------IGAGEKNKISTATI 281 (477) Q Consensus 209 ~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy~-------~~g~q~~rISt~~I 281 (477) ..- |..+|+......-.... ..=..||.+.-.-..+++++++++..... -.|++ .++|+++.+|- -+ T Consensus 435 ~~e--~~l~~~~~lTP~~~~~~--~~s~~~~~~~~~Pv~vG~~v~f~~~~g~~-~~v~r~~~~~~~~d~y~~~dlt~-~~ 508 (808) T protein:vir:88 435 QAQ--FVLSSKTILSSKTIELD--LTTEFDVSDGARPYGIGRGVYFAAPRASF-TSLKRYYAIQDVSDVKSAEDVSA-HV 508 (808) T ss_pred CcE--EEEeCCCcccceeEEEE--EEEEecccCCCCceEeCCeEEEEecCCCe-eEEEEEEEeeeccCceehhhHHH-HH Confidence 655 77788654332111111 11136999888889999999999876311 12322 45677777744 34 Q ss_pred HHHHHhcCccccceeEEEEEEECCEEEEEEEcCC-eEEE--Eeccc-----cCcceeeEEec---------CCCcccce- Q lcl|Aclame:pro 282 DKIIRYYSADELAASFMESIRFDNHELLLLHLPK-HTLC--FDGSA-----SHQYSQWSLLK---------SGFYDEPY- 343 (477) Q Consensus 282 E~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~-~Tw~--yD~~t-----~~Wher~s~~~---------~~~~~~r~- 343 (477) +..|++.. . .+.+++.+.+.++....-+ .-+| |.-.. .-|| ||-+.. ...+++-| T Consensus 509 ~h~~~~~~-~-----~~~~~~~~~~~~v~~~~~~g~l~~~~y~~~~~e~~v~aW~-r~~~~g~~~~~~~~~~~~~d~l~~ 581 (808) T protein:vir:88 509 PSYITNTV-H-----AIHGSGTENFVSILSDGSPNKVFIYKFLYLDEILQQQSFS-HWEFGDAATTRVLAASCIGSYCYL 581 (808) T ss_pred HHhcCCCe-E-----EEEEeCCCCeEEEEEEcCCCEEEEEEEeccCCceeEEeeE-EEecCCCeeEEEEEEeccCCEEEE Confidence 55554311 1 1223445555443333332 2222 22111 1344 222110 00000001 Q ss_pred -----------------------------EEEE-----------------------------------EEEeCCeEEEEE Q lcl|Aclame:pro 344 -----------------------------RAID-----------------------------------FMFFDNQITVGD 359 (477) Q Consensus 344 -----------------------------Ra~~-----------------------------------~~~~~g~~~vGD 359 (477) +..+ .+-.+|..+.+| T Consensus 582 vV~r~~~~~ler~~~~~~~~~~~~~~~~~~lD~~~~~~~g~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~ 661 (808) T protein:vir:88 582 MIDRPEGLCLERMEFTQHTIDYSIEPYRTYMDMKKTIVLGAYNIDTNLTSFDVRTAYGGTPGPESTFYTIDQQGVLIEHE 661 (808) T ss_pred EEEcCCcEEEEEEeeccCCCCCccccceeeeeeeeeeccccccCccccceeecccccccccccceeEEEEcCCceEEeee Confidence 0000 000111112121 Q ss_pred cCCCe---EEEEcCCCcc---cCCCEeeEE-Eeece-ec-cCC-----------ceEEEEEEEEE-eC-----CCC-CCc Q lcl|Aclame:pro 360 KKEGV---LGHLIFNASN---QYEQQTEHL-LYTPM-IK-ADN-----------ARLFDFELEAS-TG-----VAQ-IAD 412 (477) Q Consensus 360 ~~~g~---l~~Ld~~~~t---d~G~~i~~~-~~tP~-~~-~~~-----------~R~~~~ele~~-~G-----vgq-~~~ 412 (477) ..+.. -..+..+... .=|-+..+. ..+|. +. .++ .|+.+..+.+. +| +.. ..+ T Consensus 662 ~~~~~~~~~~~~~~~~~~~~v~vGl~y~s~~~~~p~~~~~~~g~~~~~~~~~gr~~l~r~~~~~~~tg~~~v~v~~~~~~ 741 (808) T protein:vir:88 662 ARDWATNPYISFVGNRAGEQMVIGKQYTFQYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWLNYEESGAFEINVNNGSSE 741 (808) T ss_pred cccccCcceEEeCCCccCceEEEeeeeeEEEEecceEEecCCCCcceeecccceEEEEEEEEEeecccceEEEeCCCccc Confidence 11110 0111111000 013333333 22332 22 111 12322222221 11 111 111 Q ss_pred eEEEEeeeCccccCcceEeccCCC--ceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 413 KLFLSVTTDGINYSREQLIEQNSP--FQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 413 ~v~l~~SdDG~tws~~~~~~~g~~--g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) .+ ...+|..|+.+.+ .|.+ +.-..++-+ .|...+ .++++....|.++....+..| T Consensus 742 ~~---~~~~~~~~~~~~~--~~~~~~~tg~~~vp~--~~~~~~---~~v~i~~d~P~P~tilsi~~e 798 (808) T protein:vir:88 742 FV---YVMTGGRLGIQRV--LGELSVGTGQFKFPV--TGNAVN---QRVTITSSNPNPLNVIGCGWE 798 (808) T ss_pred ce---eeccCcccCcccc--cCccccccceEEEEe--cccCce---eEEEEEECCCCceEEEEEEEE Confidence 11 1234777775543 2222 222233433 355543 356666667776666667777 No 24 >protein:vir:1543 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:31 # MgeName: phiYeO3-12 # Cross-refs: genbank:acc:NP_052111;swissprot:trembl:q9t105;genbank:gi:9634037;uniprot:Q9T105;genbank:GeneID:1262408 Probab=92.82 E-value=0.0098 Score=31.59 Aligned_cols=436 Identities=12% Similarity=0.103 Sum_probs=152.8 Q ss_pred Cchhhccceeceeeccccccc---ccccceee-ee---ecccccccccccccccccc----------cccCcce---eec Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVKD---IKTADYID-AL---PVNMLATPKEVLNASGYLR----------SFPGIEK---KQD 60 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~~---~~~~d~i~-~~---pvNl~~~~~e~~~s~~~L~----------~~PGl~~---~~~ 60 (477) +...--. ..-.-+..|.... .-+.+.+. .+ +.+..|..... .+...++ ..|+-.- ..+ T Consensus 165 I~i~gs~-~~~~t~~~gs~~~~~~~~s~~~ia~~l~~~~~~~~p~~~~~-~~~~~w~~~~~~g~~~i~a~~~~~~~~~~t 242 (801) T protein:vir:15 165 IEFNGAE-RAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNND-QDPNKWRFNVGPGFIHILAPNNDNVWGLQT 242 (801) T ss_pred EEeCCcc-eEEEEeccCcccchhhhcceeechHHHhhhhhhccCcccee-ccCccEEEEecCcEEEEeCCCCcccceeee Confidence 0000000 0000111111100 00001110 00 00000000000 0000000 0000000 000 Q ss_pred cchhe-ee-------------EEEeecCCeEEEEECC--e-----eEeeeeeEE---eecccccEEEEeCCCeEEEEECC Q lcl|Aclame:pro 61 AKGVS-RG-------------VHFNTKNNALYRVCGN--T-----LYRNDKEVA---DIAGMSRVSMSHSSHSQAICFEG 116 (477) Q Consensus 61 ~~g~~-rG-------------~~~~~~~g~ly~V~G~--~-----Ly~v~~~iG---~i~g~g~Vsma~N~~~~~Iv~~g 116 (477) ..|.. .. +-....||.+..|.|. + .++.....| +..+-|.+.--++.+-+.+++.- T Consensus 243 ~dg~~~~~~~~~~~~v~~~~~lp~~~~~G~~v~v~~~~~~~~~~y~v~~~~~~~~w~E~a~~g~~~~~~~~tmp~~lv~~ 322 (801) T protein:vir:15 243 KDGYADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLYYHTMPWALVRA 322 (801) T ss_pred ccccCceeeeEEeecccceeeeeeecCCCcEEEEEecCCCccceEEEEEEcCCeeEEeecccccceeeeccccceEEEee Confidence 00000 00 0012344544444432 1 111111100 11223333333333222222211 Q ss_pred CcceEEEEcccceE---eecCcccCCCCCCCceeEEEEecceEEEEeeCCCeEEEe---cccCc-------cCcCCCccc Q lcl|Aclame:pro 117 KVKLYRYDGTEKAL---SNWPKDKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVT---DLEDE-------SKPDRYQPF 183 (477) Q Consensus 117 ~~~~y~yd~~~~~~---~~~~~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS---~L~d~-------s~~~~~l~f 183 (477) ...-|.++.....- .....+.+|.+....+.+|+|..+|++|.- ...++.| ++.|. ..+|++-++ T Consensus 323 ~~~~~~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~--~~~v~~Srtgd~~nF~~~t~~~~~DdD~i~~ 400 (801) T protein:vir:15 323 SDGNFDFKVLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS--GENIILSRTSKYFNFFPASVSNYSDDDPIDV 400 (801) T ss_pred ccceEEEeccccccccCCccccCCcccccCCCceEEEEEcceEEEee--CCeEEEEecCCccccccccccCCCCCccEEE Confidence 11224333222111 111224466655567889999999998864 3334434 22221 225566778 Q ss_pred eEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCc Q lcl|Aclame:pro 184 YRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQP 263 (477) Q Consensus 184 atAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~ 263 (477) +.+..+++.|.-++++++.|+||....- |..+|+......-....+ .=..+|.+.-.-..+++++++++..... - T Consensus 401 ~~~~~~~~~i~~~v~~~~~L~i~t~~~q--~~ls~~~~lTP~~~~~~~--~s~~~~~~~~~Pv~vg~~v~f~~~~g~~-~ 475 (801) T protein:vir:15 401 AVSHNRVSTLKYAVPFSEELLLWSDQAQ--FVLTASGILSSRSVELNL--TTQFDVQDRARPHGVGRNVYFASPRASF-T 475 (801) T ss_pred EecCCcceeeEEEeecCCcEEEEecCcE--EEEcCCCcccceeEEEEE--EEeeeccCCCCceEeCCeEEEEecCCCe-e Confidence 8888888888889999999988876643 777887544322111111 1135888877778999999999875321 1 Q ss_pred EEEE-------ccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcC-CeEEEEe----cc---ccCcc Q lcl|Aclame:pro 264 AVYL-------IGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLP-KHTLCFD----GS---ASHQY 328 (477) Q Consensus 264 ~Vy~-------~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP-~~Tw~yD----~~---t~~Wh 328 (477) .|++ .++|+++.+|- -++..|++ .... +.+.+.+++.++.-..- +.-++|- .. -.-|| T Consensus 476 ~~~r~~~~~~~~d~y~a~Dlt~-~~~hl~~~-~v~~-----~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~ 548 (801) T protein:vir:15 476 SINRYYAVQDVSSVKNAEDMTA-HVPNYIPN-GVFS-----ISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWS 548 (801) T ss_pred EEEEEEeecccccceehhhHHH-HHHHhcCC-ceEE-----EEEeCCCCcEEEEEEcCCCEEEEEEEecCCCceEEEeeE Confidence 2322 45678888854 34555643 1111 11233455543322222 3334442 11 22677 Q ss_pred eeeEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEeece-e--ccCCceEE-EEEEEEE Q lcl|Aclame:pro 329 SQWSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLYTPM-I--KADNARLF-DFELEAS 404 (477) Q Consensus 329 er~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~tP~-~--~~~~~R~~-~~ele~~ 404 (477) ||-+ ....+..|+..-+ ..||.+-.. .+|..++++....- . .....|++ +...+.. T Consensus 549 -~~~~------~g~~~~~~~~~~~----------d~l~~~v~r---~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~ 608 (801) T protein:vir:15 549 -HWDF------GDNVTVFAAQVIN----------STMTVLMGN---EHAVWMGRLHFTKNSIDIPGEPYRLYIDAKRKYT 608 (801) T ss_pred -EEEc------CCCEEEEEEEecC----------CEEEEEEEe---cCcEEEEEEEEccccccCCCcceeeeeeeeeeEe Confidence 4655 2234555543322 234433332 22333333321110 1 11111221 1111110 Q ss_pred --------------------eCCCCCCceEEEEeeeCccccC-----------cceEeccCCCc-------eeceeEEEE Q lcl|Aclame:pro 405 --------------------TGVAQIADKLFLSVTTDGINYS-----------REQLIEQNSPF-------QYDKRILWR 446 (477) Q Consensus 405 --------------------~Gvgq~~~~v~l~~SdDG~tws-----------~~~~~~~g~~g-------~~~~r~~~~ 446 (477) .|...-+-+...-.. ||..-. ....++.+..+ .|..++..- T Consensus 609 ~~~~t~~~~~~~~~~~~~~~~gl~~l~g~~v~v~~-dG~~~~~~~~~~g~~~~~~~~i~~~~~~~~v~vGl~y~~~~~~~ 687 (801) T protein:vir:15 609 IPAGTYNDDTYQTSISLATIYGMNFTKGRVSVVFP-DGKIIEVDQPINGWSSDPVLRLDGNQEGQVVYIGFNIPFTYTFS 687 (801) T ss_pred eccceeccCceecccccccccccccccceEEEEEe-CCceeeeeeecCcccCcceEEEcCCCCCcEEEEeeeeeEEEEec Confidence 011100011111111 111000 00011111110 111112111 Q ss_pred Eeee----ccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 447 RIGR----VRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 447 RlG~----~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) ..-. ...+ -.-....|+-|..++++++ T Consensus 688 ~~~~~~~~~~~~----~~~~~~~rl~l~r~~~~~~ 718 (801) T protein:vir:15 688 KFLIKKTAEDGS----TATEDIGRLQLRRAWVNYE 718 (801) T ss_pred ceEEeccCCCCC----ceeeeeccEEEEEEEEEec Confidence 1100 0000 0000011222222222222 No 25 >protein:vir:2203 Length: 794 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:49 # MgeName: T7 # Cross-refs: genbank:acc:NP_042000;swissprot:sw:p03747;genbank:gi:9627472;uniprot:P03747;genbank:GeneID:1261024 Probab=92.39 E-value=0.012 Score=31.19 Aligned_cols=446 Identities=12% Similarity=0.112 Sum_probs=156.0 Q ss_pred Cchhh---cc-ceeceeecc-cccccccccc-eeeee-e----ccccccccccccccccc--ccccCcceeeccchhe-e Q lcl|Aclame:pro 1 MLSEV---FM-PKIQIPLAK-GLVKDIKTAD-YIDAL-P----VNMLATPKEVLNASGYL--RSFPGIEKKQDAKGVS-R 66 (477) Q Consensus 1 ~~~~~---~M-~~~~iPl~~-G~~~~~~~~d-~i~~~-p----vNl~~~~~e~~~s~~~L--~~~PGl~~~~~~~g~~-r 66 (477) -...+ ++ .++.-.+.. ++.-.....+ ++-.. + ++-. +.+......... .... ....+++... - T Consensus 187 ~~~~~~~~~ia~~L~~~l~~~~~~~t~~~~~~~~~i~a~~~~~~~~~-t~~~g~~~t~~~~~~~~~--~~~~~lp~~~~~ 263 (794) T protein:vir:22 187 HVNNTDAQWLAEELAKQMRTNLSDWTVNVGQGFIHVTAPSGQQIDSF-TTKDGYADQLINPVTHYA--QSFSKLPPNAPN 263 (794) T ss_pred cceeechhhhhhhhhhhheeccccceEEeCCceEEEEEcCCceEEEE-eeecccCcceeEEEEecc--ccceeccccCCC Confidence 00000 00 000000100 0000000000 00000 0 0000 000000000000 0000 0001111110 0 Q ss_pred eEEEeec-----CCeEEEEE---CCeeEeeeeeEEeecccccEEEEeCCCeEEEEECCCcceEEEEcccceEeec---Cc Q lcl|Aclame:pro 67 GVHFNTK-----NNALYRVC---GNTLYRNDKEVADIAGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKALSNW---PK 135 (477) Q Consensus 67 G~~~~~~-----~g~ly~V~---G~~Ly~v~~~iG~i~g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~~~~~---~~ 135 (477) |.+...+ +-.-|.|. .++.|+-+..-|...+...-.|.+. ..-..+|. |.+.-.......+ +. T Consensus 264 G~~v~i~~~~~~~~~~Y~v~~~~~~~~w~e~~~~~~~~~~~~~t~p~~---lv~~~~~~---~~~~~~~w~~r~~Gd~~t 337 (794) T protein:vir:22 264 GYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTEDQVLWETMPHA---LVRAADGN---FDFKWLEWSPKSCGDVDT 337 (794) T ss_pred CeEEEEEeCCCCCcceeEEEEeccceEEEEeeeccceeeecccceeeE---eeeccCCc---EEEeeccccccccCcccc Confidence 1110000 00112221 1122221111222223323333321 00012333 3222222222222 22 Q ss_pred ccCCCCCCCceeEEEEecceEEEEeeCCCeEEEec---ccCc-------cCcCCCccceEEeecCCceEEEEeeCCEEEE Q lcl|Aclame:pro 136 DKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVTD---LEDE-------SKPDRYQPFYRAESQPDGIVSVDAWRDLIVC 205 (477) Q Consensus 136 ~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS~---L~d~-------s~~~~~l~fatAE~~pD~iv~v~~~~~~l~l 205 (477) +.+|.+-.-.+.+|+|..+|++|.-| ..++.|. +.|. ..+|++-+++.+..+++.|.-++++++.|+| T Consensus 338 np~psf~g~~i~~v~f~q~RL~f~~~--~~v~~Srtgd~~nF~~~t~~~~~DdD~i~~~~ss~~~~~i~~~v~~~~~L~i 415 (794) T protein:vir:22 338 NPWPSFVGSSINDVFFFRNRLGFLSG--ENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLI 415 (794) T ss_pred CCcceecCCCcceEEEEcceEEEecC--CeEEEEccCCccccccccCcCCCCCccEEEEecCCcceeeEEEeecCCcEEE Confidence 34555444567889999999988642 3333342 2221 2345666777777788888889999999988 Q ss_pred EecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEEEE-------ccCceeeecCC Q lcl|Aclame:pro 206 FGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVYL-------IGAGEKNKIST 278 (477) Q Consensus 206 fG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy~-------~~g~q~~rISt 278 (477) |....- |..+|+......-....+ .=..+|.+.-.-..+++++++++.... --.|++ .++|+++.+|- T Consensus 416 ~t~~~e--~~l~~~~~lTP~~~~~~~--~s~~~~~~~~~Pv~vg~~v~f~~~~g~-~~~~~r~~~~~~~~d~y~~~Dlt~ 490 (794) T protein:vir:22 416 WSDEAQ--FVLTASGTLTSKSVELNL--TTQFDVQDRARPFGIGRNVYFASPRSS-FTSIHRYYAVQDVSSVKNAEDITS 490 (794) T ss_pred EecCcE--EEEeCCCcccceeEEEEE--EEEeeccCCCCceEeCCeEEEEecCCC-eeEEEEeEeeecccCceehhhHHH Confidence 866655 777886544322111111 113589888888899999999987532 112332 45678877744 Q ss_pred HHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCC-eEEEEe---cc----ccCcceeeEEecCCCcccceEEEEEEE Q lcl|Aclame:pro 279 ATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPK-HTLCFD---GS----ASHQYSQWSLLKSGFYDEPYRAIDFMF 350 (477) Q Consensus 279 ~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~-~Tw~yD---~~----t~~Wher~s~~~~~~~~~r~Ra~~~~~ 350 (477) -++..|++. .. .+.+++.+.+.++....-+ .-++|- .. -.-|| ||-+ ....+..|+.. T Consensus 491 -~~~~~~~~~--~~----~~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~~v~aW~-~~~~------~g~~~~~~~~~ 556 (794) T protein:vir:22 491 -HVPNYIPNG--VF----SICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWS-HWDF------GENVQVLACQS 556 (794) T ss_pred -HHHHhcCCc--eE----EEEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceeEEeeE-EEEc------CCCEEEEEEEe Confidence 455556431 11 1224566777655555553 444432 11 23576 4544 22344444433 Q ss_pred -eCCeEEEEEcCC-CeEEEEcC--CCcccCCCEee-EE---E-e-ec-eeccCCceEEEEEEEEEeCCCCCCceEEEEee Q lcl|Aclame:pro 351 -FDNQITVGDKKE-GVLGHLIF--NASNQYEQQTE-HL---L-Y-TP-MIKADNARLFDFELEASTGVAQIADKLFLSVT 419 (477) Q Consensus 351 -~~g~~~vGD~~~-g~l~~Ld~--~~~td~G~~i~-~~---~-~-tP-~~~~~~~R~~~~ele~~~Gvgq~~~~v~l~~S 419 (477) .+.-|++-..+. +.+-+++. +..+-.+++.. ++ . . .| ....++..+..+.+....|....+-++. ..- T Consensus 557 ~~d~l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~g~~~~~~~~t~~~~~~~~g~~~~~g~~v-~~~ 635 (794) T protein:vir:22 557 ISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKIT-VLE 635 (794) T ss_pred cCCEEEEEEEeCCCEEEEEEEEeeccccCCCccceeeeeeeEEEeeccceeecCCcceEEEcccccCcccccceEE-EEE Confidence 344455544444 33333321 11111222211 00 0 0 00 0000011111111111112111111111 111 Q ss_pred eCcccc-Ccce----------EeccCCC-------ceeceeEEEEEee----------------e---------ccceee Q lcl|Aclame:pro 420 TDGINY-SREQ----------LIEQNSP-------FQYDKRILWRRIG----------------R---------VRKNIG 456 (477) Q Consensus 420 dDG~tw-s~~~----------~~~~g~~-------g~~~~r~~~~RlG----------------~---------~~~~vg 456 (477) .||... .... .++.+.+ -.|..++.+-+.- + ..+=.+ T Consensus 636 ~dg~~~~~~~~~~~~~~~~~~~v~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~~~~~~~~~~~grl~l~r~~~~~~~tg~ 715 (794) T protein:vir:22 636 PDGKITVFEQPTAGWNSDPWLRLSGNLEGRMVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGT 715 (794) T ss_pred cCCceeeceeeeeeeeccceEEeCCCCCCcEEEEeeeeeEEEEecceEEEecCCCccceeeecceEEEEEEEEEeccccc Confidence 222211 1000 1111111 1222333322210 0 000012 Q ss_pred EEEEEEeeCCe---eEEEEEEE--------eC Q lcl|Aclame:pro 457 FKIRIITKSPV---TLSDLSIR--------ME 477 (477) Q Consensus 457 f~~r~~~~~~v---~l~~~~~~--------~E 477 (477) |++++....+- ...+..+- ++ T Consensus 716 ~~v~v~~~~~~~~~~~~~~~~g~~~~~~g~~~ 747 (794) T protein:vir:22 716 FDIYVENQSSNWKYTMAGARLGSNTLRAGRLN 747 (794) T ss_pred eEEEEcCCCcccceeecCceecccccccCccc Confidence 33333221110 11111110 00 No 26 >protein:vir:3366 Length: 801 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:67 # MgeName: T3 # Cross-refs: genbank:acc:NP_523337;swissprot:trembl:q8w5u3;genbank:gi:17570828;goa:Q8W5U3;uniprot:Q8W5U3;genbank:GeneID:927453 Probab=79.54 E-value=0.1 Score=25.99 Aligned_cols=440 Identities=13% Similarity=0.111 Sum_probs=159.6 Q ss_pred Cchhhccceeceeeccccccc-cccccee-eee---ecccccccccccc--------cccc-cccccCcceee---ccch Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVKD-IKTADYI-DAL---PVNMLATPKEVLN--------ASGY-LRSFPGIEKKQ---DAKG 63 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~~-~~~~d~i-~~~---pvNl~~~~~e~~~--------s~~~-L~~~PGl~~~~---~~~g 63 (477) -+....=..-.+|-...+.+. .-+.+.+ +.+ +.+-.|....... .++. ....|+-.... +..| T Consensus 166 ~i~gs~~~~~~~~~gs~~~~v~~~s~~~~A~~l~~~~~~~~~~~~~~~~~~~w~~~~~~g~~~i~~p~~~~~~~itt~~g 245 (801) T protein:vir:33 166 EFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAAQLRNNLGNPNNDQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDG 245 (801) T ss_pred EECCcceEEEEeeccccccccccccchhhhhhhhhhhhccCccceeeecCceEEEEecCeEEEEecCCCcccccccccCC Confidence 000000000111111111110 0000100 000 0000000000000 0000 00011100000 0000 Q ss_pred he-eeE-------------EEeecCCeEEEEECCe-----eEeee--eeEE---eecccccEEEEeCCCeEEEEECCCcc Q lcl|Aclame:pro 64 VS-RGV-------------HFNTKNNALYRVCGNT-----LYRND--KEVA---DIAGMSRVSMSHSSHSQAICFEGKVK 119 (477) Q Consensus 64 ~~-rG~-------------~~~~~~g~ly~V~G~~-----Ly~v~--~~iG---~i~g~g~Vsma~N~~~~~Iv~~g~~~ 119 (477) .. ..+ -....+|.+..|.+.. -|.+. ..-| +..+-|.+.--++.+-..+++..... T Consensus 246 ~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~v~~~~~~~~~~y~v~~~~~~~~w~e~~~~g~~~~~~~~tmp~~l~~~~~~ 325 (801) T protein:vir:33 246 YADQLINPVTHYTQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALVRASDG 325 (801) T ss_pred ccceeEEEEeecccceeeeeeecCCCcEEEEEecCCCcccceEEEEEcCCcEEEEeeccccceeeeecccceEEEEccCc Confidence 00 000 0112234343333210 01111 0000 11111222222222212222111111 Q ss_pred eEEEEcccce---EeecCcccCCCCCCCceeEEEEecceEEEEeeCCCeEEEe---cccCc-------cCcCCCccceEE Q lcl|Aclame:pro 120 LYRYDGTEKA---LSNWPKDKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVT---DLEDE-------SKPDRYQPFYRA 186 (477) Q Consensus 120 ~y~yd~~~~~---~~~~~~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS---~L~d~-------s~~~~~l~fatA 186 (477) -|.+.-.... .-..+.+.+|.+....+.+|+|..+|++|.- ...++.| ++.|. ..+|++-+++.+ T Consensus 326 tf~~~~~~w~~r~~gd~~tnp~psf~g~~~~~v~f~q~RL~f~~--~~~v~~Srtgd~~nF~~~t~~~~~DdD~i~~~~~ 403 (801) T protein:vir:33 326 NFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLS--GENIILSRTSKYFNFFPASVSNYSDDDPIDVAVS 403 (801) T ss_pred eEEecccCccccccCCccccCcccccCCCceEEEEEcceEEEee--CCeEEEEecCCccccccccccCCCCCccEEEEec Confidence 1222211111 1111224466665567789999999998864 3334434 22222 235666778888 Q ss_pred eecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEEE Q lcl|Aclame:pro 187 ESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVY 266 (477) Q Consensus 187 E~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy 266 (477) ..+++.|.-++++++.|+||....- |..+|+......-....+ .=..||.+.-.-..+++++++++.... --.|+ T Consensus 404 ~~~~~~i~~~v~~~~~L~l~t~~~q--~~l~~~~~lTP~~~~~~~--~s~~~~~~~~~Pv~vg~~v~f~~~~g~-~~~v~ 478 (801) T protein:vir:33 404 HDRVSTLKYAVPFSEELLLWSDQAQ--FVLTASDILSSRSVGLNL--TTQFDVQDRARPHGVGRNVYFSSPRAS-FTSIN 478 (801) T ss_pred CCcceeeeEEeecCCcEEEEecCcE--EEEeCCCcccceeEEEEE--EEeecccCCCCceEecCeEEEEecCCC-eeEEE Confidence 8888888889999999988866655 777887544322122111 113589887778899999999987531 11233 Q ss_pred E-------ccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcC--CeEEEE--ecccc-----Cccee Q lcl|Aclame:pro 267 L-------IGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLP--KHTLCF--DGSAS-----HQYSQ 330 (477) Q Consensus 267 ~-------~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP--~~Tw~y--D~~t~-----~Wher 330 (477) + .++|+++.+|- -++..|++ ... ..+ +.+...+. .++.-- +.-++| .-..+ -|| | T Consensus 479 r~~~~~~~~d~y~~~Dlt~-~~~~~~~~-~~~----~~~-~~~~~~~~-~~~~~~~~~~l~~~~y~~~~~e~~v~aW~-~ 549 (801) T protein:vir:33 479 RYYAVQDVSSVKNAEDMTA-HVPNYIPN-GVF----SIS-GTTAENFV-AILTSGAPNRVYIYKFLYIDEEIRQQSWS-H 549 (801) T ss_pred EEEeecccccceehhhHHH-HHHHhcCC-ceE----EEE-EcCCCCeE-EEEEecCCCEEEEEEEecCCCceEEEeeE-E Confidence 3 45677777743 45555543 111 111 22334443 334433 333443 22212 677 4 Q ss_pred eEEecCCCcccceEEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEeeEEEe-eceeccCC--ceEE-EEEEEE--- Q lcl|Aclame:pro 331 WSLLKSGFYDEPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTEHLLY-TPMIKADN--ARLF-DFELEA--- 403 (477) Q Consensus 331 ~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~~~~~-tP~~~~~~--~R~~-~~ele~--- 403 (477) |-+. ...+..|+ +..+..||.+-.. +++-.++++.. ...+.... .+++ +...+. T Consensus 550 ~~~~------g~~~~~~~----------~~~~d~l~~vv~r---~~~~~le~~~~~~~~~d~~~~~~~~~lD~~~~~~~~ 610 (801) T protein:vir:33 550 WDFG------DNVTVFAA----------QVINSTMTVLMSN---EHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIP 610 (801) T ss_pred EEcC------CCEEEEEE----------ecCCCEEEEEEEc---CCcEEEEEEEEeeccccCCCccceEEeecceEEEec Confidence 6552 22333332 2234455555444 34445555532 22221111 1221 111110 Q ss_pred -----------------EeCCCCCCceEEEEeeeCcc---------ccCcceE--eccCCCce-------eceeEEEEEe Q lcl|Aclame:pro 404 -----------------STGVAQIADKLFLSVTTDGI---------NYSREQL--IEQNSPFQ-------YDKRILWRRI 448 (477) Q Consensus 404 -----------------~~Gvgq~~~~v~l~~SdDG~---------tws~~~~--~~~g~~g~-------~~~r~~~~Rl 448 (477) +-|....+-+...- -.||. .|..... ++.+..+. |..++..-.+ T Consensus 611 ~~~~~~~~~~t~~~~~~~~gl~~~eg~~v~~-~~dG~v~~~~~~~~~~~~~~~l~i~~~~~~~~v~vGl~y~s~~~~~~~ 689 (801) T protein:vir:33 611 AGTYNDDTYQTSISLSTIYGMNFTKGRVSVV-FPDGKIVEIDQPINGWSSDPMLRLDGNQEGQVVYIGFNIPFTYTFSKF 689 (801) T ss_pred ccceecCccccccccccccCCccccceEEEE-EeCCceEeeeeccccccCceeEEecCCCCCCEEEEeeeeeEEEEeCce Confidence 00111111111111 11221 2222211 11111111 2222222111 Q ss_pred eecccee-eEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 449 GRVRKNI-GFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 449 G~~~~~v-gf~~r~~~~~~v~l~~~~~~~E 477 (477) =. ++.- .-+-.-....|+-|..+++++. T Consensus 690 ~~-~~~~~~~~~~~~~~~r~~l~r~~~~~~ 718 (801) T protein:vir:33 690 LI-KKTAEDGSTATEDIGRLQLRRAWVNYE 718 (801) T ss_pred EE-eccCCCCceeeeeeccEEEEEEEEEee Confidence 00 0000 0000111234556777777777 No 27 >protein:vir:78957 Length: 826 # NCBI annotation: putative tail tubular protein B # Family: family:all:825 # MgeID: mge:1860 # MgeName: LKD16 # Cross-refs: genbank:acc:YP_001522826;genbank:gi:158345061;genbank:GeneID:5687447 Probab=78.51 E-value=0.11 Score=25.76 Aligned_cols=428 Identities=11% Similarity=0.107 Sum_probs=159.0 Q ss_pred Cc------hh---hccc-----eeceeecccccccccccceeeeeecccccccccccccccccccccCcceee----cc- Q lcl|Aclame:pro 1 ML------SE---VFMP-----KIQIPLAKGLVKDIKTADYIDALPVNMLATPKEVLNASGYLRSFPGIEKKQ----DA- 61 (477) Q Consensus 1 ~~------~~---~~M~-----~~~iPl~~G~~~~~~~~d~i~~~pvNl~~~~~e~~~s~~~L~~~PGl~~~~----~~- 61 (477) -. .+ -... -+.+-+....+... ....+...|+..++ -..+.+ -.+.+|-.... .. T Consensus 242 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~v~~~~~--l~a~~p--~~~~~~~~~~~~~~~~~~ 315 (826) T protein:vir:78 242 TVAGYLNQRGVQDGYIAFRGDGDIVVEVSTDMGNNY--GIASGGMSLNATAD--LPALLP--GAGTPGTGVQFMDGAIMA 315 (826) T ss_pred eeccceeecccccceEEEecCCCeEEEeccCCCccc--eEEEeeEEEecccc--eeeeec--ccccceEEEEEEeeeEec Confidence 00 00 0000 01111110111000 00111112222211 000000 00112211110 00 Q ss_pred chheeeEEEeecCCeEEEE--ECCeeEeeeeeEEeeccc--ccEEEEeCCCeEEEEECCCcceEEEEc---ccceEeecC Q lcl|Aclame:pro 62 KGVSRGVHFNTKNNALYRV--CGNTLYRNDKEVADIAGM--SRVSMSHSSHSQAICFEGKVKLYRYDG---TEKALSNWP 134 (477) Q Consensus 62 ~g~~rG~~~~~~~g~ly~V--~G~~Ly~v~~~iG~i~g~--g~Vsma~N~~~~~Iv~~g~~~~y~yd~---~~~~~~~~~ 134 (477) +|... ..-|+. ..++.|+-+ .-+|+ +.-.|- ..++.+....-|.+.- +..+....+ T Consensus 316 ~g~~~--------~~~y~~~~~~~~~w~e~----a~~g~~~~~~tmp-----~~l~~~~~~~~f~~~~~~w~~r~~gd~~ 378 (826) T protein:vir:78 316 TGSTK--------APVYFAWDAANRRWAER----AAYGTDWVLKKMP-----LALRWDESTDTYSLNELEYDRRGSGDEE 378 (826) T ss_pred CCCcc--------cceeEEEEcCCceEEEe----eccCccccccccc-----EEEEEecCCCeEEEeeccccccccCccc Confidence 01100 111111 111222211 11221 111111 1122111112233222 222222233 Q ss_pred cccCCCCCCCceeEEEEecceEEEEeeCCCeEEEe---cccCc-------cCcCCCccceEEeecCCceEEEEeeCCEEE Q lcl|Aclame:pro 135 KDKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVT---DLEDE-------SKPDRYQPFYRAESQPDGIVSVDAWRDLIV 204 (477) Q Consensus 135 ~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS---~L~d~-------s~~~~~l~fatAE~~pD~iv~v~~~~~~l~ 204 (477) ...+|.+..-.+.+|+|..+|++|.-| ..++.| ++.|. ..+|++-+++.+..+++.|.-++++++.|+ T Consensus 379 tnp~psf~g~~i~~v~f~q~RL~f~~~--~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~~s~~~~~i~~~v~~~~~L~ 456 (826) T protein:vir:78 379 TNPTFNFVKRGITGMTTFQGRLVLLSQ--EYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLI 456 (826) T ss_pred ccCcccccCCCceEEEEEeceEEEeeC--CeEEEEeccCccccccccccCCCCCCcEEEEEccCcceeEEEEEecCCcEE Confidence 355666666678899999999988643 333334 22222 235667778888888889988999999998 Q ss_pred EEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEEEE-------ccCceeeecC Q lcl|Aclame:pro 205 CFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVYL-------IGAGEKNKIS 277 (477) Q Consensus 205 lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy~-------~~g~q~~rIS 277 (477) ||....- |..+|+........+.. ..=..||.+.-.-..++++++++++....--.|+. -+.|+++.+| T Consensus 457 l~T~~~e--~~l~~~~~lTP~~~~~~--~~s~~~~~~~~~Pv~vG~~v~F~~~r~~~~s~v~e~~~~~~~~~~y~~~dlt 532 (826) T protein:vir:78 457 VFAKKYQ--AVVPGGGIVTPRTAVIS--ITTQYDVDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVT 532 (826) T ss_pred EEecCcE--EEEeCCCcccceeEEEE--EEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeecccCccchHHHH Confidence 8866655 77788654422111111 11135888877778999999999764211012322 2236677775 Q ss_pred CHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcC-CeEEEEe--ccc-----cCcceeeEEecCCCcccceEEEEEE Q lcl|Aclame:pro 278 TATIDKIIRYYSADELAASFMESIRFDNHELLLLHLP-KHTLCFD--GSA-----SHQYSQWSLLKSGFYDEPYRAIDFM 349 (477) Q Consensus 278 t~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP-~~Tw~yD--~~t-----~~Wher~s~~~~~~~~~r~Ra~~~~ 349 (477) -|. .+.|++ .+ ... +++.+-+..+....- +.-+||- -.. .-|| ||-+ ....++.|++ T Consensus 533 ~~~-~~l~~~--~v---~~~--a~s~~~~~~v~~~~~~g~l~~~ty~~~~~e~~v~aW~-~~~~------~g~v~~v~~i 597 (826) T protein:vir:78 533 SHI-PSYMPG--PA---EYI--QAAASSGYLVFGTSAADEMICHQYLWQGNEKVQNAYH-RWTL------RHQIIGAYFT 597 (826) T ss_pred HHH-HHhcCC--Ce---EEE--EEeCCCCeEEEEEcCCCeEEEEEEEecCCcEEEEeEE-EEcc------CCcEEEEEEE Confidence 554 555542 11 112 466766765544444 3444442 112 2577 4544 2345654444 Q ss_pred EeCCeEEEEEcCC-CeEEEEc-----CCCcccCCCEeeEEE----eeceeccCCc---------eEEEEEEEEEeCCCC- Q lcl|Aclame:pro 350 FFDNQITVGDKKE-GVLGHLI-----FNASNQYEQQTEHLL----YTPMIKADNA---------RLFDFELEASTGVAQ- 409 (477) Q Consensus 350 ~~~g~~~vGD~~~-g~l~~Ld-----~~~~td~G~~i~~~~----~tP~~~~~~~---------R~~~~ele~~~Gvgq- 409 (477) .+.-|++=.+.+ +.+-+++ .+...+....-.+.. ....++..+. -+..++-+....... T Consensus 598 -~d~l~~vv~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 676 (826) T protein:vir:78 598 -GDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDGAAVYQLQPQVGAYMERY 676 (826) T ss_pred -CCeEEEEEEeCCCEEEEEEEEEecCCCccccccccceeEEEEEEEcceeccccceeEEecCCceeeeeccceeeecccc Confidence 555666655554 3344442 121122222111111 1111111111 111222221111100 Q ss_pred -------CCceEEEEeeeCccccCcceEeccCCCc------------------eeceeEEEEEee-eccceeeEEEEEEe Q lcl|Aclame:pro 410 -------IADKLFLSVTTDGINYSREQLIEQNSPF------------------QYDKRILWRRIG-RVRKNIGFKIRIIT 463 (477) Q Consensus 410 -------~~~~v~l~~SdDG~tws~~~~~~~g~~g------------------~~~~r~~~~RlG-~~~~~vgf~~r~~~ 463 (477) ....+.|+-..+ |+. ..+-.|.+. .-..|++.||.- ..++--.|++++.. T Consensus 677 ~~~~~~~~~~~~~l~~~~~---~~~-~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~~r~~l~r~~~~~~~tg~~~v~v~~ 752 (826) T protein:vir:78 677 QLGVKRETSTKVFLDVPEA---VVG-SVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISD 752 (826) T ss_pred ceeccccCCCceEEEeCCC---ccc-cEEEEeeceeEEEEeCceEEecCCCcceeecceEEEEEEEEeeccccEEEEeCC Confidence 011122221111 111 112222211 111222222211 00011123333332 Q ss_pred eCCe---eEEEEEEEeC Q lcl|Aclame:pro 464 KSPV---TLSDLSIRME 477 (477) Q Consensus 464 ~~~v---~l~~~~~~~E 477 (477) ..+- ......+++. T Consensus 753 ~~~~~~~~~~~~~~~~~ 769 (826) T protein:vir:78 753 TARPNQPWYDTTPLRLS 769 (826) T ss_pred CccCcceeeeecccccc Confidence 2221 1111111111 No 28 >protein:vir:7329 Length: 825 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:143 # MgeName: epsilon15 # Cross-refs: genbank:acc:NP_848220;genbank:gi:30387391;genbank:GeneID:2641863 Probab=71.79 E-value=0.19 Score=24.53 Aligned_cols=424 Identities=11% Similarity=0.065 Sum_probs=145.0 Q ss_pred Cchhhccceeceeeccccccc---ccccceeee----eecccccccccccc--------cccccccccCcceee------ Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVKD---IKTADYIDA----LPVNMLATPKEVLN--------ASGYLRSFPGIEKKQ------ 59 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~~---~~~~d~i~~----~pvNl~~~~~e~~~--------s~~~L~~~PGl~~~~------ 59 (477) -..++-|..=..+-..|.... ..+.+..+. ..+.+.....++.. ..+..+.+.+..-.+ T Consensus 158 p~~~in~~~sv~v~asg~tg~~TiTaS~a~~~~~~vG~~i~~~~~~v~si~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 237 (825) T protein:vir:73 158 PFEDINVDETVKVYASASTGTITLTASSAIFGAEQVGKLFYLEQPAVDSVPVWETSKTTAINDVRRADSNYYRANTSGKT 237 (825) T ss_pred ccccccccccceeeecccCceeEEEeeccccCchhcCeEEEEecccccccceeeeeeEEEeeeEEECCCceeeeeccccc Confidence 001111111011111111000 000000000 00000000000000 000000111111110 Q ss_pred -cc-chheeeEEEee-------cCCeEEEE--ECCeeEeeeeeEEe---ecccccEEEEeCCCeEEEEECCCcceEEEEc Q lcl|Aclame:pro 60 -DA-KGVSRGVHFNT-------KNNALYRV--CGNTLYRNDKEVAD---IAGMSRVSMSHSSHSQAICFEGKVKLYRYDG 125 (477) Q Consensus 60 -~~-~g~~rG~~~~~-------~~g~ly~V--~G~~Ly~v~~~iG~---i~g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~ 125 (477) +. +..+.|..+.. .++..+++ .|....+++...++ ..+.+...|.++ ++.+... .++. T Consensus 238 ~t~~~~a~~g~~~~~~~g~~~~~~~~~~~~~~~~~g~~~it~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---t~~~ 309 (825) T protein:vir:73 238 GTLRPSHTEGMSWDGWGGTGSDDTGIQWEYLHSGFGIAKITAVAGDGLTATADVVSFIPSQ-----VVGSANA---SYKW 309 (825) T ss_pred ceeeccccCCceeEeeeeecccCCceEEEEEecCCceEEEeeccccceeeccccceecccc-----cccCCCC---Cccc Confidence 00 01111111111 11122211 22222222211110 011111111111 1111110 0111 Q ss_pred ccceEeecC-cccCCCCCCCceeEEEEecceEEEEee-CC-CeEEEe--------cccCccCcCCCccceEEeecCCceE Q lcl|Aclame:pro 126 TEKALSNWP-KDKYPQYDLGEVIDVCRNRGRYIWLQK-GG-ERFGVT--------DLEDESKPDRYQPFYRAESQPDGIV 194 (477) Q Consensus 126 ~~~~~~~~~-~~~~p~~~~~~~~dv~~~dgyfV~~~~-g~-~~~~iS--------~L~d~s~~~~~l~fatAE~~pD~iv 194 (477) . ..-|. ..+||. .|+|..+|.+|.-. .. ..+..| ....+..+|++-++.-+..+++.|. T Consensus 310 ~---~~~~~~~~gyPs-------~v~f~q~RL~f~g~~~~p~~v~~Srtgd~~nF~~~~~~~DdD~I~~~~s~~~~~~i~ 379 (825) T protein:vir:73 310 A---KYAWNSVNGYPS-------TVVYYQQRLYFAASTAYPQTIWASRTGDYKDFGKNNPIQDDDRIIYTYAGRQVNEIR 379 (825) T ss_pred c---cCCcccCCCCcc-------EEEEEcceEEEeecCCCCCEEEEEccCCccccccCCCCCCCccEEEEEcCCcceeEE Confidence 1 11222 234653 69999999988511 11 112222 1222223556677788888888888 Q ss_pred EEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEE------EEc Q lcl|Aclame:pro 195 SVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAV------YLI 268 (477) Q Consensus 195 ~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~V------y~~ 268 (477) -++..+ .|++|.+. -| |..+|+.+-++-+--..-...=..||.. -.-..+++++++++.. | ..| +.. T Consensus 380 ~~~~~~-~L~~~t~~-~e-~~l~~~~~~~lTP~~~~~~~~s~~g~~~-~~Pv~vg~~~~Fv~~~--g-~~vre~~~~~~~ 452 (825) T protein:vir:73 380 HLIDVG-NLVALTSG-GE-YTISGDQNKVLTPSAFSFSSQGNNGSSN-VPPIAVANIALFIQEK--G-SVVRDLAYSFDV 452 (825) T ss_pred EEeecC-cEEEEecC-ce-EEEecCCCcccceeeEEEEeeeeecccc-ccceEeCCeEEEEeCC--C-CeEEEEEEeeec Confidence 888885 67666655 44 5667764333221111111122468864 4667889999999754 2 233 334 Q ss_pred cCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCC---eEEEEecccc--CcceeeEEecCCCcccce Q lcl|Aclame:pro 269 GAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPK---HTLCFDGSAS--HQYSQWSLLKSGFYDEPY 343 (477) Q Consensus 269 ~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~---~Tw~yD~~t~--~Wher~s~~~~~~~~~r~ 343 (477) ++|+++.+|-++ +.+++...-. ..+|+++.++++.+...| -.+.|+-..+ -|| ||-. .... T Consensus 453 d~~~~~dlt~~a-~hl~~~~~~~------~~a~~~~p~~~~~~v~~dg~l~~~ty~~~q~v~aW~-~~~~------~g~v 518 (825) T protein:vir:73 453 DGYQGTDLTILA-NHLFQKHSIV------DWSFCIVPYSSAFCIRDDGKLLVLTYLRDQQVFAWA-PQSS------AGKY 518 (825) T ss_pred Cceeccchhhhh-HhhccCCceE------EEEEcCCCceEEEEEecCCeEEEEEEeccccceeeE-EEec------CCcE Confidence 677888886333 4444332112 225888888888888886 4567776555 687 4644 2356 Q ss_pred EEEEEEEeCCeEEEEEcCCCeEEEEcCCCcccCCCEee-EEEeeceeccCCc-eEE-EEEEEE-----EeCCCCCCceEE Q lcl|Aclame:pro 344 RAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYEQQTE-HLLYTPMIKADNA-RLF-DFELEA-----STGVAQIADKLF 415 (477) Q Consensus 344 Ra~~~~~~~g~~~vGD~~~g~l~~Ld~~~~td~G~~i~-~~~~tP~~~~~~~-R~~-~~ele~-----~~Gvgq~~~~v~ 415 (477) +..|.+...+. -.||.+=.. +.+|+... -++..|..+.+.. .++ +.-+.. ..|...-+-+ - T Consensus 519 ~~~~~i~~~~~--------D~l~~iV~R--~~~g~~~~yiE~~~~~~~~~~~~~~~vD~g~~~~g~~~~~~l~~l~g~-t 587 (825) T protein:vir:73 519 ESTCSISEGSE--------DAVYFVVNR--TINGQTVRYIERLSSRLFTNDEDAFFVDCGLSYDGRNTSSRTMTISGG-T 587 (825) T ss_pred EEEEEecCCCc--------cEEEEEEEE--eeCCceEEEEEEecccccCCCcceeEEEEEeeecccceeeceeeeCCc-e Confidence 77776654321 122222211 12233321 1111222111111 111 110000 0011000000 0 Q ss_pred EEeeeC---------cc-ccCcceEeccCCCceeceeEE----------EEEeeec-cceeeEEEEEEeeCCeeEEEEEE Q lcl|Aclame:pro 416 LSVTTD---------GI-NYSREQLIEQNSPFQYDKRIL----------WRRIGRV-RKNIGFKIRIITKSPVTLSDLSI 474 (477) Q Consensus 416 l~~SdD---------G~-tws~~~~~~~g~~g~~~~r~~----------~~RlG~~-~~~vgf~~r~~~~~~v~l~~~~~ 474 (477) ++|..| |. +...+....+|-+ |..+.. ..|.+++ +.++ .+++.-...+..+-+|.+ T Consensus 588 v~~~~~g~~~~~v~~g~itl~~~~~~~i~l~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~-v~v~~~~~~~a~~~~~~~ 664 (825) T protein:vir:73 588 GDWSYQVDYPVTVSGGAYFVNTDVGAQIQFP--YTGTDPDTNEPVAKELRGDIISVTSNTA-VVVRFNRNVPPVLRNVAT 664 (825) T ss_pred EEEEeCCeEEEEEcCCeEEecccceEEEEec--ccCcccccccceeceeeEEEccccCceE-EEEEecccccceeeeecc Confidence 122222 21 2222221111111 111111 0111111 1111 111111111111111111 Q ss_pred E--------------eC Q lcl|Aclame:pro 475 R--------------ME 477 (477) Q Consensus 475 ~--------------~E 477 (477) - +| T Consensus 665 t~~~~a~~~~~gL~hLe 681 (825) T protein:vir:73 665 TNWQMARQTFSGLAHLE 681 (825) T ss_pred cCCCcchheeccccccC Confidence 1 00 No 29 >protein:vir:10452 Length: 794 # NCBI annotation: tail protein # Family: family:all:825 # MgeID: mge:184 # MgeName: phiA1122 # Cross-refs: genbank:acc:NP_848299;genbank:gi:30387490;genbank:GeneID:1733952 Probab=69.45 E-value=0.22 Score=24.16 Aligned_cols=453 Identities=12% Similarity=0.084 Sum_probs=163.0 Q ss_pred Cchhhccceeceeecccccccccccc--eeee-eecccccc----cccccccccccccccCcceeeccc---h-heeeEE Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVKDIKTAD--YIDA-LPVNMLAT----PKEVLNASGYLRSFPGIEKKQDAK---G-VSRGVH 69 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~~~~~~d--~i~~-~pvNl~~~----~~e~~~s~~~L~~~PGl~~~~~~~---g-~~rG~~ 69 (477) -+...-++..+.|...-.. ...+++ ++.. +.-.+-+. ......+--++.+.-| ....+.. + ....+. T Consensus 168 ~i~~~~~at~~tpdgt~~~-~~~~~s~~~ia~~L~~~l~a~~~g~t~~~~g~~i~i~a~s~-~~~~t~s~~~~~~~~~~~ 245 (794) T protein:vir:10 168 HINGKDVATYKIPDGSKPE-HVNNTDAQWLAERLAKQMRINLSGWTVNVGQGFIHVTAPSG-QQIDSFTTKDGYADQLIN 245 (794) T ss_pred ccCCcceeEEEecCCCCcc-cceecchhhhhhhhhhhhhcccCCceEEeCCeEEEEEeccC-ceeccccccCCcCcceeE Confidence 2333345555555432111 111111 2211 00000000 0000000001111000 0000000 0 000000 Q ss_pred -------------EeecCCeEEEEECC--e-e--Eeee--e---eEEeecccccEEEEeCCCeEEEEE---CCCcceEEE Q lcl|Aclame:pro 70 -------------FNTKNNALYRVCGN--T-L--YRND--K---EVADIAGMSRVSMSHSSHSQAICF---EGKVKLYRY 123 (477) Q Consensus 70 -------------~~~~~g~ly~V~G~--~-L--y~v~--~---~iG~i~g~g~Vsma~N~~~~~Iv~---~g~~~~y~y 123 (477) -...+|.+..|.|. + . |.+. + .-.+..+-|...=-++.+.+..++ +|..+.... T Consensus 246 ~v~~~~~~~~~lp~~~~~G~~v~i~~~~~~~~~~yyv~~~~~~~~w~E~~~~g~~~~~~~~tmP~~l~r~~~~t~~~~~~ 325 (794) T protein:vir:10 246 PVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDAERKVWTETLGWNTENQVLLETMPHALVRAADGNFDFKWL 325 (794) T ss_pred EEEeccCcceecccCCCCCcEEEEEeCCCCCcceeEEEEEcCCcEEEEecccceeEEEecccceeEEEEeccceEEeeec Confidence 01123444444432 1 0 2121 1 111222333222222222222222 222111111 Q ss_pred EcccceEeecCcccCCCCCCCceeEEEEecceEEEEeeCCCeEEEec---ccCc-------cCcCCCccceEEeecCCce Q lcl|Aclame:pro 124 DGTEKALSNWPKDKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVTD---LEDE-------SKPDRYQPFYRAESQPDGI 193 (477) Q Consensus 124 d~~~~~~~~~~~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS~---L~d~-------s~~~~~l~fatAE~~pD~i 193 (477) +-+....-..+.+.+|.+..-.+.+|+|..+|++|.-| ..++.|. +.|. ..+|++-+++.+..+++.| T Consensus 326 ~w~~r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~--~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~~~~i 403 (794) T protein:vir:10 326 EWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSG--ENIILSRTAKYFNFYPASIANLSNDDPIDVAVSTNRIAIL 403 (794) T ss_pred ccccccccccccCccCcccCCCccEEEEEcceEEEeeC--CeEEEEecCCcccccccccccCCCCccEEEEecCCcceee Confidence 21222222222344666555567899999999998652 3333352 2221 2245566677777777888 Q ss_pred EEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEE------EE Q lcl|Aclame:pro 194 VSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAV------YL 267 (477) Q Consensus 194 v~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~V------y~ 267 (477) .-++++++.|+||....- |..+|+......-....+ .=..||.+.-.-..+++++++++.....-..+ +. T Consensus 404 ~~~v~~~~~L~i~T~~~q--~~l~~~~~lTP~~~~~~~--~s~~~~~~~~~Pv~vg~~v~f~~~~g~~~~~~r~~~~~~~ 479 (794) T protein:vir:10 404 KYAVPFSEELLIWSDEAQ--FVLTASGTLTSRSVELNL--TTQFDVQDRARPYGIGRNVYFASPRSSYTSIHRYYAVQDV 479 (794) T ss_pred EEEeecCCcEEEEecCcE--EEEeCCCcccceeEEEEE--EEeecccCCCCceEeCCeEEEEecCCCeeEEEEEeeeccc Confidence 889999999988866554 777887544322112111 11358988777788999999998753211112 23 Q ss_pred ccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcC-CeEEE--Eecc-----ccCcceeeEEecCCCc Q lcl|Aclame:pro 268 IGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLP-KHTLC--FDGS-----ASHQYSQWSLLKSGFY 339 (477) Q Consensus 268 ~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP-~~Tw~--yD~~-----t~~Wher~s~~~~~~~ 339 (477) .++|+++.+|- -++..|++.. .+ +.+++.+.+.++....- +.-++ |... -.-|| ||-+ T Consensus 480 ~d~y~a~Dlt~-~~~hl~~~~v-~~-----~~~~~~~~~~~~~~~~~~~~l~~~~y~~~~~e~~v~aW~-~~~~------ 545 (794) T protein:vir:10 480 SSVKNSEDITS-HVPNYIPNGV-FS-----ICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWS-HWDF------ 545 (794) T ss_pred cCceehhhHHH-HHHHhcCCce-EE-----EEEeCCCCcEEEEEEcCCCEEEEEEEeecCCceEEEeEE-EEEc------ Confidence 45577777743 3455554311 11 22466667665554444 34334 3211 12576 4554 Q ss_pred ccceEEEEEEE-eCCeEEEEEcCC-CeEEEEcCC--CcccCCCEeeEEEeec--eeccCC-----ceEEEEEEEEEeCCC Q lcl|Aclame:pro 340 DEPYRAIDFMF-FDNQITVGDKKE-GVLGHLIFN--ASNQYEQQTEHLLYTP--MIKADN-----ARLFDFELEASTGVA 408 (477) Q Consensus 340 ~~r~Ra~~~~~-~~g~~~vGD~~~-g~l~~Ld~~--~~td~G~~i~~~~~tP--~~~~~~-----~R~~~~ele~~~Gvg 408 (477) ....+..|+.. .+.-|++-..+. +.+-+++.. ..+..+++...-+... +..+.+ .-+-.+.+.-..|.. T Consensus 546 ~g~~~~~~~~~~~d~l~~iv~r~~~~~~~r~~~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~t~~~~~~~~g~~ 625 (794) T protein:vir:10 546 GENVQVLACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGAN 625 (794) T ss_pred CCcEEEEEEEecCCeEEEEEEeCCCEEEEEEEEeecCCCCCCccceeeeecceEEEecCcccccccccceEEcccccCcc Confidence 22345455443 334455554443 344443321 1111122211000000 000000 000000000111111 Q ss_pred CCCce-EEEEeeeCcc---------ccCc--ceEeccCCC-------ceeceeE------------------------EE Q lcl|Aclame:pro 409 QIADK-LFLSVTTDGI---------NYSR--EQLIEQNSP-------FQYDKRI------------------------LW 445 (477) Q Consensus 409 q~~~~-v~l~~SdDG~---------tws~--~~~~~~g~~-------g~~~~r~------------------------~~ 445 (477) .-+-+ +.+ ..||. .|.. ...++.+.+ -.|..++ +. T Consensus 626 ~~eg~~v~~--~adg~~~~~~~~~~~~~g~~~l~i~~~~~a~~v~vGl~y~s~~~~~~~~i~~~~~~~~~~~~~~gr~~l 703 (794) T protein:vir:10 626 FGRGKITVL--EPDGKITVFEQPTSGWQSDPWLRLSGNLEGREVFIGFNINFVYEFSKFLIKQTTDDGSTSTEDIGRLQL 703 (794) T ss_pred cccccEEEE--ecCCceeeeeeeeeeeecceEEEecCCCCCceEEEeeeeeEEEEecceEEEccCCCcceeeeccccEEE Confidence 10111 111 11111 0000 001111111 1122222 22 Q ss_pred EEeeec-cceeeEEEEEEeeCCee---EEEEEEEeC Q lcl|Aclame:pro 446 RRIGRV-RKNIGFKIRIITKSPVT---LSDLSIRME 477 (477) Q Consensus 446 ~RlG~~-~~~vgf~~r~~~~~~v~---l~~~~~~~E 477 (477) ||+=.. .+=-+|++++....+-. +.++...-. T Consensus 704 ~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~ 739 (794) T protein:vir:10 704 RRAWVNYEDSGTFDIYVENQSSNWKYTMAGARLGSN 739 (794) T ss_pred EEEEEEeeccccEEEEEcCCccccceeeccceeccc Confidence 221000 00012333332221110 111110000 No 30 >protein:vir:94583 Length: 792 # NCBI annotation: Tubular tail protein B # Family: family:all:825 # MgeID: mge:1516 # MgeName: Berlin # Cross-refs: genbank:acc:YP_919014;genbank:gi:119637778;genbank:GeneID:5179343 Probab=64.45 E-value=0.3 Score=23.45 Aligned_cols=437 Identities=10% Similarity=0.090 Sum_probs=153.9 Q ss_pred Cchhhccceeceeeccccccc-ccccceeeeee-----cccccccccccccccc-------------cccccCcceee-- Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVKD-IKTADYIDALP-----VNMLATPKEVLNASGY-------------LRSFPGIEKKQ-- 59 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~~-~~~~d~i~~~p-----vNl~~~~~e~~~s~~~-------------L~~~PGl~~~~-- 59 (477) ...+-.+..-.+|....+... ....+++.... .|.--..-+.....++ +...+|...-. T Consensus 163 i~i~~~~~~~~~~~~t~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~ 242 (792) T protein:vir:94 163 FTINNTKIAYEIAHGDAPEHSKQTDAQWLVKKLAGLARLNVAFKGWTFTEGPGYIHVIAPSNSQINSLSTEDGYADQLMN 242 (792) T ss_pred EEecCceeeeeeecCcccceecccchhhhhhhhhhhccccccccccEEEECCeEEEEEecCCceeeeeecccCcCcceee Confidence 111122333334433222211 01111221100 0000000000000001 11111111000 Q ss_pred ----cc--chheeeEEEeecCCeEEEEECC-----eeEeeee-----eEEeecccccEEEEeCCCeEEEEECCCcceEEE Q lcl|Aclame:pro 60 ----DA--KGVSRGVHFNTKNNALYRVCGN-----TLYRNDK-----EVADIAGMSRVSMSHSSHSQAICFEGKVKLYRY 123 (477) Q Consensus 60 ----~~--~g~~rG~~~~~~~g~ly~V~G~-----~Ly~v~~-----~iG~i~g~g~Vsma~N~~~~~Iv~~g~~~~y~y 123 (477) .+ .+--... .++|..-.|.+. ..|.+.. .--+..+-|.+..-++.+..-.++.....-|.+ T Consensus 243 ~~~~~v~~~~~lp~~---~~~G~~v~i~~~~~~~~d~y~v~~~~~~~~w~E~~~~~~~~~~~~~tmp~~lv~~~~~~~~~ 319 (792) T protein:vir:94 243 AVMHTSQSFSRLPVE---APNGYTVKIVGDTSKTSDMFYVQYDNMKKVWKEVAGWGVQKGLNGGTMPHALVRQADGSFQM 319 (792) T ss_pred eeeeccccccccccc---CCCCcEEEEEccCCCCccceEEEEEcCCceEEEecccceeeeecccccCeeEEEcCCCcEEE Confidence 00 0000000 123333333221 2232211 111223334333333322221111111112332 Q ss_pred EcccceEe---ecCcccCCCCCCCceeEEEEecceEEEEeeCCCeEEEec---ccCc-------cCcCCCccceEEeecC Q lcl|Aclame:pro 124 DGTEKALS---NWPKDKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVTD---LEDE-------SKPDRYQPFYRAESQP 190 (477) Q Consensus 124 d~~~~~~~---~~~~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS~---L~d~-------s~~~~~l~fatAE~~p 190 (477) .-....-. ..+...+|.+..-.+.+|+|..+|++|.- ...++.|. +.|. ..+|++-+++.+..++ T Consensus 320 ~~~~w~~r~~gd~~tnp~psf~g~~i~~v~f~q~RL~f~~--~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~~ 397 (792) T protein:vir:94 320 QVLPWTQRTCGDMDTNPTPSIVDQKINDVFFFRNRLGFLA--GENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRI 397 (792) T ss_pred EeccccccccCccccCccceeccCCcceEEEEcceEEEec--CCeEEEEccCCcccCccccccCCCCCccEEEEecCCcc Confidence 22111111 11123344443334578999999999864 33344342 2221 2255667778888888 Q ss_pred CceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEEEE--- Q lcl|Aclame:pro 191 DGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVYL--- 267 (477) Q Consensus 191 D~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy~--- 267 (477) +.|.-++++++.|+||....- |..+|+......-....+ .=..+|...-.-..+++++++++.... --.|++ T Consensus 398 ~~i~~~v~~~~~L~l~T~~~q--~~l~~~~~lTP~~~~i~~--~s~~~~~~~~~Pv~vG~~v~Fv~~~g~-~~~v~r~~~ 472 (792) T protein:vir:94 398 SILKYAVPFSEELLLWSDQAQ--FVLSAQGILSPKSVELNL--TTEFDVSDRARPFGVGRGVYFASPRAS-YTSLNRYYA 472 (792) T ss_pred eeeeEEeecCCcEEEEecCcE--EEEeCCCcccceeEEEEE--EEEeeccCCCCceEeCCeEEEeecCCC-eeEEEeeee Confidence 888889999999988866655 777886544321111111 113578877777889999999987521 112333 Q ss_pred ----ccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCC-eEEEEe----cc---ccCcceeeEEec Q lcl|Aclame:pro 268 ----IGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPK-HTLCFD----GS---ASHQYSQWSLLK 335 (477) Q Consensus 268 ----~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~-~Tw~yD----~~---t~~Wher~s~~~ 335 (477) .++|+++.+|-| ++..|++.. .. +.+++.+.+.+.....-+ .-++|- .. -.-|| ||-+. T Consensus 473 ~~~~~d~y~a~DlT~~-~~hl~~~~v-~~-----~~a~~~~~~~vv~~~~~~g~l~~~ty~~~~~e~~v~aW~-~~~~~- 543 (792) T protein:vir:94 473 VQDVSSVKSAEDMSAH-VPNYIPNGV-FS-----IRGSSTENFISVLSSNAPSRIFLYKFLYLNEEIAQQSWS-HWELG- 543 (792) T ss_pred eccccCceehhhHHHH-HHHhcCCce-EE-----EEEeCCCCcEEEEEEcCCCeEEEEEEeecCCceEEEeEE-EEEcC- Confidence 356777777433 455554311 11 235777777655555443 434432 11 12576 46542 Q ss_pred CCCcccceEEEEEEEeCCe-EE-EEEcCCCeEEEEcCCCcccCCCEeeEEEeeceeccCCceEE-EEEEEE--------- Q lcl|Aclame:pro 336 SGFYDEPYRAIDFMFFDNQ-IT-VGDKKEGVLGHLIFNASNQYEQQTEHLLYTPMIKADNARLF-DFELEA--------- 403 (477) Q Consensus 336 ~~~~~~r~Ra~~~~~~~g~-~~-vGD~~~g~l~~Ld~~~~td~G~~i~~~~~tP~~~~~~~R~~-~~ele~--------- 403 (477) ...+..|+.+.+.+ |+ |=..-++.+-+++....+ --+.....|++ +..++. T Consensus 544 -----g~~~~~~~~~~~D~l~~~v~r~~~~~~~r~~~~~~~------------~d~~~~~~~~~lD~~~~~~~~~~~~~~ 606 (792) T protein:vir:94 544 -----SNVTVLACDSIGSTMYLVLRNQSHTWMCRAHFTKNS------------IDFPDEPYRLYIDNKVKYVIPEGSYND 606 (792) T ss_pred -----CcEEEEEEeecCCEEEEEEEeCCCEEEEEEEEeecc------------cccCCCcceeeeeeeeeEEecCcceec Confidence 23454444333322 32 222222333333221100 00001111111 111111 Q ss_pred -----------EeCCCCCCce-EEEEeeeCcc---------ccC-c--c---------eEeccCCCceeceeEEEEEe-- Q lcl|Aclame:pro 404 -----------STGVAQIADK-LFLSVTTDGI---------NYS-R--E---------QLIEQNSPFQYDKRILWRRI-- 448 (477) Q Consensus 404 -----------~~Gvgq~~~~-v~l~~SdDG~---------tws-~--~---------~~~~~g~~g~~~~r~~~~Rl-- 448 (477) ..|....+-+ +.+- -||. .|- . . ..+-+|- .|..++.+-.. T Consensus 607 ~~~~T~~~~~~~~gl~~l~G~~v~v~--~dG~~~~~~~~~~~~~~~~~~i~~~g~~~a~~v~VGl--~y~~~~~~~~~~~ 682 (792) T protein:vir:94 607 DTYATTVKPVDVYGMKYWTGKFYIVA--SDGLVSWFEPPRGGWPNGVPMLTMSGNREGETIYVGL--AISFRYVFSKFLI 682 (792) T ss_pred CceeeeeccccccCcccccCcEEEEE--ecCceeEeecccceecCCccEEEecCCccCCeEEEee--eeeEEEEecccee Confidence 1111111111 1110 1111 000 0 0 0011111 12222222111 Q ss_pred --------------eecc---------ceeeEEEEEEeeCCee---EEEEEEEeC Q lcl|Aclame:pro 449 --------------GRVR---------KNIGFKIRIITKSPVT---LSDLSIRME 477 (477) Q Consensus 449 --------------G~~~---------~~vgf~~r~~~~~~v~---l~~~~~~~E 477 (477) |++| +=-.|++++....+.. +.+..+.-. T Consensus 683 ~~~~g~~~~~~~~~gr~rl~r~~~~~~~tg~~~v~~~~~~~~~~~~~~~~~~~~~ 737 (792) T protein:vir:94 683 KKTADDGSIATEDIGRLQLRRAWVNYEDSGAFTVEVENTSRLFSYDMAGARLGSN 737 (792) T ss_pred eccCCCcCccccceeeEEEEEEEEeeeccceeEEEEcCCCcceeeeeccceeccc Confidence 0000 0001222221111110 000000000 No 31 >protein:vir:103790 Length: 768 # NCBI annotation: hypothetical protein # Family: family:all:780 # MgeID: mge:1645 # MgeName: BcepC6B # Cross-refs: genbank:acc:YP_024932;genbank:gi:48697202;genbank:GeneID:2846114 Probab=48.54 E-value=0.67 Score=21.55 Aligned_cols=438 Identities=10% Similarity=-0.009 Sum_probs=155.7 Q ss_pred Cch-hhccceeceeecccccccccccceeee-ee----ccccccccccccccccccc--ccCcceeeccchheeeE-EEe Q lcl|Aclame:pro 1 MLS-EVFMPKIQIPLAKGLVKDIKTADYIDA-LP----VNMLATPKEVLNASGYLRS--FPGIEKKQDAKGVSRGV-HFN 71 (477) Q Consensus 1 ~~~-~~~M~~~~iPl~~G~~~~~~~~d~i~~-~p----vNl~~~~~e~~~s~~~L~~--~PGl~~~~~~~g~~rG~-~~~ 71 (477) +.. ++.-.....++..+-..+.. .+..-+ ++ .+....-+......+.+.+ ++|.. +....+..... .+ T Consensus 198 ~v~~~~~l~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~-~~~~~~~~~~~~~~- 274 (768) T protein:vir:10 198 DVGTLFYLEQEDNSFVKPWVVHQK-IGPSELRRVGDRVYLCTAVGTATPQVTGTETPTHTSGSR-WDGTGQDESATDEY- 274 (768) T ss_pred hcceeeeeeeeccccccccEEEEe-eeeEEEEecCCceEEeeeeccccccccceeccccccCce-EEEecCcccccccc- Confidence 000 00000000111100000000 000000 00 0000000000000000000 11100 00000000000 00 Q ss_pred ecCCeEEEEECCeeEeeeeeEEeecccccEEEEeCCCeEEEEECCCcc-----eEEEEccc--ceEeecC-cccCCCCCC Q lcl|Aclame:pro 72 TKNNALYRVCGNTLYRNDKEVADIAGMSRVSMSHSSHSQAICFEGKVK-----LYRYDGTE--KALSNWP-KDKYPQYDL 143 (477) Q Consensus 72 ~~~g~ly~V~G~~Ly~v~~~iG~i~g~g~Vsma~N~~~~~Iv~~g~~~-----~y~yd~~~--~~~~~~~-~~~~p~~~~ 143 (477) ..-+..++ .++.+...+.|.+...-+|+++.... .++... ......++ ....-|. ..+|| T Consensus 275 ~~~~~~~~-----~~~~~~~~~~i~~~~~~t~~~~~~~~---~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~g~P---- 342 (768) T protein:vir:10 275 GSIGAEWE-----YQHSGYGTVLITGYTNDQVVTGTVAT---NDPADPGMLPNTVVTLTGTYKWARSLFNSTDGFP---- 342 (768) T ss_pred cccceEEE-----EEEcCCceEEEEEecCCeeEEeeeee---ecCcccccccccccccCCCcccccCCCcCCCCCc---- Confidence 00011111 11222233344444444444442211 111100 00010011 1111222 23465 Q ss_pred CceeEEEEecceEEEEeeCCCeEEEecc---cCc-------cCcCCCccceEEeecCCceEEEEeeCCEEEEEecceEEE Q lcl|Aclame:pro 144 GEVIDVCRNRGRYIWLQKGGERFGVTDL---EDE-------SKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEY 213 (477) Q Consensus 144 ~~~~dv~~~dgyfV~~~~g~~~~~iS~L---~d~-------s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEv 213 (477) +.|+|..+|++|.- ...++.|.- .|. ..+|++-+++.+..+++.|--+++++ .|+||....- T Consensus 343 ---s~v~f~q~RL~f~~--~~~v~~Srtgd~~nF~~~s~~~~~DdD~I~~~~ss~~~~~i~~~v~~~-~L~i~T~~~q-- 414 (768) T protein:vir:10 343 ---QMGTFWRNRLCLMR--DRWLAMSVSADFETFKTKDADQQTDDSAIVQQLNARQLNKLAWMVESD-SLLIGMTGDE-- 414 (768) T ss_pred ---eEEEEEeeeEEEee--CCEEEEEcccccccccccccccccCCccEEEEecCCcceeEEEEeecC-cEEEEecCce-- Confidence 46899999998864 222333422 221 12455677788888888999999985 6877777755 Q ss_pred EEecCCC-C--CceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEE------EEccCceeeecCCHHHHHH Q lcl|Aclame:pro 214 FTLTGSA-D--TSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAV------YLIGAGEKNKISTATIDKI 284 (477) Q Consensus 214 w~~tG~~-~--~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~V------y~~~g~q~~rISt~~IE~~ 284 (477) |..+|+. + ....-.+..+ .=..||.. -.-..+++++++++... ..| +..++|+++.+|-+ ++.+ T Consensus 415 ~~l~~~~~~~~lTP~~~~i~~--~s~~g~~~-~~Pv~vG~~v~fv~~~g---~~vre~~y~~~~d~y~a~DlT~~-a~hl 487 (768) T protein:vir:10 415 WVIGPANASQPVSAANLNAAR--RTSYGSKR-IQPVQVGGTIMFVQKAG---RKLRDFKYDFSSDNYVSTDVTKI-ADHI 487 (768) T ss_pred EEEecCCCCcccccceEEEEE--eehhcccc-cccEEeCCeEEEEcCCC---CEEEEEEeeeecCceecchhhhh-hhhh Confidence 7777642 2 2211111111 12368853 34568999999998662 223 23577888888732 2333 Q ss_pred HHhcCc-cccceeEEEEEEECCEEEEEEEcCC---eEEEEecc--cc---CcceeeEEecCCCcccceEEEEEEEe---- Q lcl|Aclame:pro 285 IRYYSA-DELAASFMESIRFDNHELLLLHLPK---HTLCFDGS--AS---HQYSQWSLLKSGFYDEPYRAIDFMFF---- 351 (477) Q Consensus 285 i~~y~~-~e~a~a~a~s~~~~GH~fyvitfP~---~Tw~yD~~--t~---~Wher~s~~~~~~~~~r~Ra~~~~~~---- 351 (477) ++.... ......+ +|+.+.++.+.+-..+ ..+.|+-. ++ -|| ||.+... ..++-|.+.- T Consensus 488 ~~~~~~~~~~i~~~--a~~~~p~~v~~~v~~dg~l~~~ty~~e~~~q~v~aW~-~~~~~~g-----~v~~v~~i~~~~g~ 559 (768) T protein:vir:10 488 TRGRAGTNSGIMSL--CFQQEPHSVVWAARADGQLIGCTYDEEAGRSDVYGWH-RHPDANG-----FVECVASMPAPDGA 559 (768) T ss_pred ccccCccccceeeE--EEeecCCeEEEEEecCCeEEEEEEecCCCceeEEeEE-EEEcCCC-----EEEEEEEEecCCCC Confidence 332111 1112223 5788888877776665 34666654 23 577 4544211 1111111110 Q ss_pred -CCeEEEEEcC-CCe----E----------------EEEcCCCcccCCCEeeEEEeece-------eccCCc-------- Q lcl|Aclame:pro 352 -DNQITVGDKK-EGV----L----------------GHLIFNASNQYEQQTEHLLYTPM-------IKADNA-------- 394 (477) Q Consensus 352 -~g~~~vGD~~-~g~----l----------------~~Ld~~~~td~G~~i~~~~~tP~-------~~~~~~-------- 394 (477) +--|++=.+. +|. + +.||.... .+|.+..-+--.+. +..|++ T Consensus 560 ~d~l~~~v~r~~~g~~~~~ie~l~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~gl~~leg~~v~v~~dG~~~~~~~v~ 638 (768) T protein:vir:10 560 SDDLWVIVRRQVNGQTVRYVEYLNPALQDDEPQSSAFYVDAGIT-YNGVPTSTIAGLGHLEGVTVAVLTDGAVHPSRTVT 638 (768) T ss_pred ccEEEEEEEecCCCeEEEEEEecCcccccccccccceEeccccc-cCCcceeeecCCCCcccceEEEEECCEeccCceec Confidence 0011110000 110 1 11211110 01111100000000 001110 Q ss_pred -----------eE-----EEEEEEE-------EeCCCCCC----ceEEEEeeeC-ccccCc-----------ceEe--cc Q lcl|Aclame:pro 395 -----------RL-----FDFELEA-------STGVAQIA----DKLFLSVTTD-GINYSR-----------EQLI--EQ 433 (477) Q Consensus 395 -----------R~-----~~~ele~-------~~Gvgq~~----~~v~l~~SdD-G~tws~-----------~~~~--~~ 433 (477) .+ +..+++. ..|..+.. .++-++.-+. |-.++. .+.. .+ T Consensus 639 ~g~itl~~~~~~v~vG~~y~s~~~~~p~~~~~~~gs~~~~~~ri~r~~v~~~~S~~~~~~~~~~~~~~~~~~~r~~~~~~ 718 (768) T protein:vir:10 639 AGAITLDWSASIVHIGVPTTCRIQTMQLNAGAANGTAQGKTKRVTNIATRFSRSLGGVVGPTFDDNDLEQLSFRKPSNAM 718 (768) T ss_pred CCEEEeCCCCceEEEeEeeeEEEEecceEeecCCccccccceEEEEEEEEEecccceEEEecCCCCCceeeeeEecCccc Confidence 00 0011111 11111111 1122222222 212210 0111 12 Q ss_pred CCC-ceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 434 NSP-FQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 434 g~~-g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |++ --+.-.+.+.-.|...+..-++|+-..|-|..|.++..+++ T Consensus 719 ~~~~~l~TG~~~v~~~~~~~~~~~i~i~~d~P~P~tvlsi~~~~~ 763 (768) T protein:vir:10 719 DRAVPLFDGDMESDWRGGYEGQSWICYQNDQPLPVTLLGFFPILD 763 (768) T ss_pred CccCCcccCEEEEEecCCCCcceEEEEEECCCCCEEEEEEEEEEE Confidence 221 00111222222344434444677777777777888877777 No 32 >protein:vir:97014 Length: 800 # NCBI annotation: 33 # Family: family:all:825 # MgeID: mge:1644 # MgeName: K1-5 # Cross-refs: genbank:acc:YP_654134;genbank:gi:108862018;genbank:GeneID:5075963 Probab=40.63 E-value=0.96 Score=20.67 Aligned_cols=440 Identities=10% Similarity=0.078 Sum_probs=154.8 Q ss_pred Cchhhccceeceeecccccc--cc-cccce-eeee---ecccccccccccccc--cccccccCcceeeccchheeeEEEe Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVK--DI-KTADY-IDAL---PVNMLATPKEVLNAS--GYLRSFPGIEKKQDAKGVSRGVHFN 71 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~--~~-~~~d~-i~~~---pvNl~~~~~e~~~s~--~~L~~~PGl~~~~~~~g~~rG~~~~ 71 (477) ...---++...+-.. |.+- .. ...++ +++. .=.++..-+...++. ...++++|-...-...|. T Consensus 201 ~~~~~~~~~~t~~~~-G~~~~i~~~~~~~~~v~t~~g~~~~~~~~~~~~v~~~~~lp~~~~~g~~v~i~~~~~------- 272 (800) T protein:vir:97 201 LQQWSGVSDYEIQRD-GTSIFIERRDGASFTITTTDGAKGKDLVAIKNKVSSTDLLPSRAPAGYKVQVWPTGS------- 272 (800) T ss_pred hhccccccceEEEeC-CcEEEEEEcCCceEEEEecCCcCceeeeEEeeeccchhhchhhCCCCcEEEEEccCC------- Confidence 110001111111000 1110 00 00000 0000 000000000000000 011122332211111110 Q ss_pred ecCCeEEEE-----ECCeeEeeeeeEEeecccccEEEEeCCCeEE-EEECCCcceEEEEcccceEe---ecCcccCCCCC Q lcl|Aclame:pro 72 TKNNALYRV-----CGNTLYRNDKEVADIAGMSRVSMSHSSHSQA-ICFEGKVKLYRYDGTEKALS---NWPKDKYPQYD 142 (477) Q Consensus 72 ~~~g~ly~V-----~G~~Ly~v~~~iG~i~g~g~Vsma~N~~~~~-Iv~~g~~~~y~yd~~~~~~~---~~~~~~~p~~~ 142 (477) ..+...|+. .+...|+-+...|...|...-.|.|--...- ...+|..+....|-.....- +.|...|-+.. T Consensus 273 ~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~~~~~tmp~~~~~~~~~~~~g~~~~~~~~w~~r~~gd~~tnp~p~f~~~~ 352 (800) T protein:vir:97 273 KPESRYWLQAEPKEGNLVSWKETIAADVLLGFDKGTMPYIIERTDIINGIAQFKIRQGDWEDRKVGDDLTNPMPSFIDEE 352 (800) T ss_pred CCCceEEEEEEecccCcceEEEeeccccccceecccceEEEEEeecccccceeEEEeccccccccCccccCccccccCCc Confidence 111111111 0122232222222222222212222100000 00122211111221111111 11222222111 Q ss_pred C-CceeEEEEecceEEEEeeCCCeEEEe---cccCc-------cCcCCCccceEEeecCCceEEEEeeCCEEEEEecceE Q lcl|Aclame:pro 143 L-GEVIDVCRNRGRYIWLQKGGERFGVT---DLEDE-------SKPDRYQPFYRAESQPDGIVSVDAWRDLIVCFGSSSI 211 (477) Q Consensus 143 ~-~~~~dv~~~dgyfV~~~~g~~~~~iS---~L~d~-------s~~~~~l~fatAE~~pD~iv~v~~~~~~l~lfG~~Tt 211 (477) - ..+.+|+|..+|++|.- ...++.| ++.|. ..+|++-+++.+..+++.|.-++++++.|+||....- T Consensus 353 ~~~~~~~v~f~q~RL~f~~--~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ss~~v~~i~~~v~~~~~L~i~T~~~q 430 (800) T protein:vir:97 353 VPQTIGGMFMVQNRLCFTA--GEAVIASRTSYFFDFFRYTVISALATDPFDIFSDASEVYQLKHAVTLDGATVLFSDKSQ 430 (800) T ss_pred CCCCceeEEEEeeeEEEec--CCeEEEEecCCccccccccccCCCCCccEEEEecCCcceeeeEEeecCCcEEEEecCcE Confidence 1 23678999999998864 3334434 22222 1255667778888888899989999999988866654 Q ss_pred EEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCc-EEE------EccCceeeecCCHHHHHH Q lcl|Aclame:pro 212 EYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQP-AVY------LIGAGEKNKISTATIDKI 284 (477) Q Consensus 212 Evw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~-~Vy------~~~g~q~~rISt~~IE~~ 284 (477) |..+|+......-....+ .=..+|...-.-..++++++++++. |.- .|+ ..++|+++.+|- -++.. T Consensus 431 --~~ls~~~~lTP~~~~~~~--~s~~~~~~~~~Pv~vG~~v~fv~~~--g~~s~vre~~~~~~~d~~~a~DlT~-~~~hl 503 (800) T protein:vir:97 431 --FILPGDKPLEKSNALLKP--VTTFEVNNKVKPVVTGESVMFATND--GSYSGVREFYTDSYSDTKKAQAITS-HVNKL 503 (800) T ss_pred --EEEeCCCcccceeEEEEE--EEeeeccCCCCcEEeCCeEEEeeCC--CCeeEEEEEeeeecccceehhhHHH-HHHHh Confidence 777886533321111111 1135898888888999999999865 221 243 336677777744 45555 Q ss_pred HHhcCccccceeEEEEEEECCEEEEEEEcCC-eEEE--Eecc-----ccCcceeeEEecCCCcccceEEEEEEE-eCCeE Q lcl|Aclame:pro 285 IRYYSADELAASFMESIRFDNHELLLLHLPK-HTLC--FDGS-----ASHQYSQWSLLKSGFYDEPYRAIDFMF-FDNQI 355 (477) Q Consensus 285 i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~-~Tw~--yD~~-----t~~Wher~s~~~~~~~~~r~Ra~~~~~-~~g~~ 355 (477) |++ ...+ +.+.+.+.+.++....-+ .-++ |.-. -.-|| ||-+. ...+..|+++ .+.-| T Consensus 504 ~~~-~v~~-----~~~~~~~~~~v~~~~~~~~~l~~~~y~~~~~e~~~~aW~-~~~~~------~~~~~~~~~~~~d~l~ 570 (800) T protein:vir:97 504 IEG-NITN-----MAASTNVNRLLVTTDKYRNIIYCYDWLWQGTDRVQSAWH-VWKWP------IGTKVRGMFYSGELLY 570 (800) T ss_pred cCC-ceEE-----EEEeCCCCeEEEEEEcCCCEEEEEEEeecCCceEEEeEE-EEecC------CCeEEEEEEEcCCeEE Confidence 643 1111 223445666554444443 3333 4321 23676 45441 1235555554 45566 Q ss_pred EEEEcCCCe-EEEEcCCCcccCCCEee-EE--Eeeceecc-CCceEE-------------EEEEEEEeCCCCCCc-eEEE Q lcl|Aclame:pro 356 TVGDKKEGV-LGHLIFNASNQYEQQTE-HL--LYTPMIKA-DNARLF-------------DFELEASTGVAQIAD-KLFL 416 (477) Q Consensus 356 ~vGD~~~g~-l~~Ld~~~~td~G~~i~-~~--~~tP~~~~-~~~R~~-------------~~ele~~~Gvgq~~~-~v~l 416 (477) ++=+..++. |-+|+.....+.+.+.. ++ ..++.+.. +....+ .+..-...|...-+. .|.+ T Consensus 571 ~vv~r~~~~~ler~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~g~~~~~G~~v~~ 650 (800) T protein:vir:97 571 LLLERGDGVYLEKMDMGDALTYGLNDRIRMDRQAELVFKHFKAEDEWVSEPLPWVPTNPELLDCILIEGWDSYIGGSFLF 650 (800) T ss_pred EEEEcCCcEEEEEEecccCcCcccccceeccccceeeeeeeecccceEeccccccCCCcceeEEEEecccccccCceEEE Confidence 666666653 33444332222222211 00 01111000 000000 000111111111110 1111 Q ss_pred EeeeCcc--ccCcc----------eEeccCCCceeceeEE------------------------EEEeeeccceeeEEEE Q lcl|Aclame:pro 417 SVTTDGI--NYSRE----------QLIEQNSPFQYDKRIL------------------------WRRIGRVRKNIGFKIR 460 (477) Q Consensus 417 ~~SdDG~--tws~~----------~~~~~g~~g~~~~r~~------------------------~~RlG~~~~~vgf~~r 460 (477) .+|.. +|.-. ..+-+| -.|..++. |-++++. -+|+++ T Consensus 651 --~~~~~~~~~~~~~~~~~~~~~~~~v~vG--l~Y~~~~~~~p~~i~~~~g~~~~~~r~~i~r~~~~~~~s---g~~~~~ 723 (800) T protein:vir:97 651 --KYNPSDNTLSTTFDMYDDSHVKAKVIVG--QIYPQEFEPTPVVIRDNQDRVSYIDVPVVGLVHLNLDMY---PDFSVE 723 (800) T ss_pred --EecCccCcccccceEEeCCCCCcEEEEe--eeeeEEEEecceEEEecCCCceeecceEEEEEEEeeccc---ccEEEE Confidence 11100 00000 001111 01111111 2222211 134444 Q ss_pred EEeeCCee---EEEEEEEe------------C Q lcl|Aclame:pro 461 IITKSPVT---LSDLSIRM------------E 477 (477) Q Consensus 461 ~~~~~~v~---l~~~~~~~------------E 477 (477) +....+-. +.....++ + T Consensus 724 v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~ 755 (800) T protein:vir:97 724 VKNVKSGKVRRVLASNRIGGALNNTVGYVEPR 755 (800) T ss_pred EccccCCceeeeecCccccccccccCCccccc Confidence 44322210 00000000 0 No 33 >protein:vir:5977 Length: 109 # NCBI annotation: hypothetical protein # Family: family:all:788 # MgeID: mge:125 # MgeName: SPP1 # Cross-refs: genbank:acc:NP_690677;genbank:geneid:6329133;genbank:gi:22855071;interpro:IPR013045;uniprot:O48446;genbank:GeneID:955315 Probab=39.03 E-value=0.49 Score=22.29 Aligned_cols=39 Identities=10% Similarity=-0.058 Sum_probs=32.8 Q ss_pred CCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 435 SPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 435 ~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) +..++++|+.+++.-..++-.|....- =+++.-+||.|| T Consensus 1 ~~~~L~~RI~i~~~~~~~D~~G~~~~~----w~~~~~~WA~v~ 39 (109) T protein:vir:59 1 MYEEFPDVITFQSYVEQSNGEGGKTYK----WVDEFTAAAHVQ 39 (109) T ss_pred CccccCccEEEEeeeeeeCCCCCeeee----eEeeEEEEEEEe Confidence 889999999999999999999887752 235567999999 No 34 >protein:vir:105035 Length: 112 # NCBI annotation: Gp9 # Family: family:all:11389 # MgeID: mge:1465 # MgeName: phiKO2 # Cross-refs: genbank:acc:YP_006589;genbank:gi:46402095;genbank:GeneID:2777900 Probab=31.89 E-value=0.67 Score=21.53 Aligned_cols=42 Identities=17% Similarity=0.052 Sum_probs=32.7 Q ss_pred cCC-CceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 433 QNS-PFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 433 ~g~-~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |+. +|+.++|+.+++....++-.|+.+.-.| ..+.-+||.|| T Consensus 1 m~M~aG~L~~RItiq~~~~~~D~~G~~~~~~W---~~~~tvWA~v~ 43 (112) T protein:vir:10 1 MSLKPGDMNCRITIGYLQSGRGPLGEPLPEKL---VESGKAWAKRE 43 (112) T ss_pred CCCCccccCCcEEEEeeeeccCCCCCEeccce---eeeEEEEEEEE Confidence 554 4999999999999999998888653222 35778899998 No 35 >protein:vir:100244 Length: 109 # NCBI annotation: gp73 # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1619 # MgeName: Bcep176 # Cross-refs: genbank:acc:YP_355409;genbank:gi:77864699;genbank:GeneID:3725966 Probab=28.05 E-value=0.9 Score=20.84 Aligned_cols=42 Identities=14% Similarity=0.076 Sum_probs=32.7 Q ss_pred cCCCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 433 QNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 433 ~g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |=++|+.++|+.+++....++-.|..+ ...-+.+.-|||.++ T Consensus 1 mm~~g~L~~rI~i~~~~~~~d~~G~~~---~~~w~~~~~~wA~i~ 42 (109) T protein:vir:10 1 MLRSSDLTEFIVIERKGGRTNENGEPL---PDDWVTHDEVWASVR 42 (109) T ss_pred CCCccccCccEEEEeeeeccCCCCCee---ccceeeEEEEEEEEE Confidence 446799999999999999988777653 223456778999998 No 36 >protein:vir:1272 Length: 119 # NCBI annotation: hypothetical protein # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:329 # MgeName: phi-105 # Cross-refs: genbank:acc:NP_690764;genbank:gi:22855004;genbank:GeneID:955243 Probab=27.45 E-value=1.1 Score=20.41 Aligned_cols=41 Identities=15% Similarity=0.068 Sum_probs=32.0 Q ss_pred cC-CCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 433 QN-SPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 433 ~g-~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |. ++|+.++|+.+++.-..++-.|.... .-+.+.-|||.|| T Consensus 1 M~m~aG~L~~rI~i~~~~~~~D~~G~~~~----~w~~~~~~wA~v~ 42 (119) T protein:vir:12 1 MRKKISQLRHRLTFQKKNETQDEEGNWNA----TYVDLFTVWGAVE 42 (119) T ss_pred CCCCccccCceEEEEeeeeccCCCCCeec----ceEeEEEEEEEEe Confidence 44 57999999999999888887766653 3455677888887 No 37 >protein:vir:193 Length: 112 # NCBI annotation: putative head-tail adaptor # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:6 # MgeName: HK97 # Cross-refs: genbank:acc:NP_037703;genbank:gi:9634168;genbank:GeneID:1262533 Probab=26.62 E-value=1.1 Score=20.46 Aligned_cols=40 Identities=13% Similarity=0.131 Sum_probs=32.6 Q ss_pred cCCCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 433 QNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 433 ~g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |. +|+.++|+.++|....++-.|.... .-..+.-|||.++ T Consensus 1 M~-~G~L~~rI~i~~~~~~~d~~G~~~~----~w~~~~~~wA~v~ 40 (112) T protein:vir:19 1 ME-PGRFRNRVKILTFTTSRDPSGQPVE----SWTGGNPVPAEVK 40 (112) T ss_pred CC-ccccCccEEEEeeeeeeCCCCCeec----ceEeEEEEEEEEE Confidence 33 7999999999999999888776653 4567788999998 No 38 >protein:vir:10366 Length: 124 # NCBI annotation: conserved phage protein; annotated as head-tail joining in some phages # Family: family:all:7034 # MgeID: mge:183 # MgeName: Xp10 # Cross-refs: genbank:acc:NP_858958;genbank:gi:32128423;genbank:GeneID:2648383 Probab=26.48 E-value=1 Score=20.54 Aligned_cols=41 Identities=10% Similarity=0.012 Sum_probs=33.0 Q ss_pred cC-CCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 433 QN-SPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 433 ~g-~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |. ++|+.++|+.+++....++-.|.... .-+.+.-+||.++ T Consensus 1 m~M~aG~L~~RI~iq~~~~~~D~~G~~~~----~W~~~~~vWA~v~ 42 (124) T protein:vir:10 1 MPISAGKLNTRAVLQRRQDGTDEWGAPKH----VWLEVGAFYTNPK 42 (124) T ss_pred CCCCccccCccEEEEecccccCCCCCeec----ceEeEEEEEEEEe Confidence 55 67999999999999998988888754 3456677888887 No 39 >protein:vir:105563 Length: 396 # NCBI annotation: hypothetical protein # Family: family:all:27455 # MgeID: mge:1540 # MgeName: F116 # Cross-refs: genbank:acc:YP_164316;genbank:gi:56692963;genbank:GeneID:3197174 Probab=25.74 E-value=2 Score=18.91 Aligned_cols=255 Identities=17% Similarity=0.094 Sum_probs=112.2 Q ss_pred Cch------hhcc-----ceec---------ee------ecccccccccccc-e-eeeeecccccccccccccccccccc Q lcl|Aclame:pro 1 MLS------EVFM-----PKIQ---------IP------LAKGLVKDIKTAD-Y-IDALPVNMLATPKEVLNASGYLRSF 52 (477) Q Consensus 1 ~~~------~~~M-----~~~~---------iP------l~~G~~~~~~~~d-~-i~~~pvNl~~~~~e~~~s~~~L~~~ 52 (477) .+. .++- +++. +| ++...++ -+.+ + -..--|+.+.+..+..-.|..+-.- T Consensus 100 pva~d~~~~Rvy~t~~~~p~~~~~~~~y~L~vp~P~~a~~~a~~Gs--l~~~~~~Y~~t~V~~~gEEs~p~~~S~~v~~~ 177 (396) T protein:vir:10 100 DLSHEVLNNRVCVAGTAGIFTYDGAQAERLTLDTPAPPLLVAGAGS--LSQGTYGAAVAWLRGPQESAPSLIAFAEVTDA 177 (396) T ss_pred chhccccCCeEEEEcCCCceeeeCCcceecCcCCCcccccccccCc--cCCceEEEEEEEEecCCCcCcccccccccCCC Confidence 000 0000 0001 11 1111111 0111 1 1111255554444333333333333 Q ss_pred cCcceeeccchheeeEEEeecCCeEEEEECCeeEeeee------eEEeec-ccccEEEEeCCCeEEEEECCCcceEEEEc Q lcl|Aclame:pro 53 PGIEKKQDAKGVSRGVHFNTKNNALYRVCGNTLYRNDK------EVADIA-GMSRVSMSHSSHSQAICFEGKVKLYRYDG 125 (477) Q Consensus 53 PGl~~~~~~~g~~rG~~~~~~~g~ly~V~G~~Ly~v~~------~iG~i~-g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~ 125 (477) +|++.-...+. ++- +....||+-.+ .+++.+ |.+.. +. .-+-|++ T Consensus 178 gg~~vtl~~~~----------~~~---i~~~RiYrS~~~G~~~~l~aE~~a~~~s~----------vl-----Ps~~w~g 229 (396) T protein:vir:10 178 GALEVTFPLCL----------DAS---VTGARLYLTRANGGELLLAGDYPLGAATV----------IL-----PTLPELG 229 (396) T ss_pred CCcEEEEEccc----------CCC---cceEEEEEeCCChhhhhheehhccceeee----------ee-----ecCCCCC Confidence 44332222110 000 11223332100 122222 11111 00 0001111 Q ss_pred ccceEeecCcccCCCCCCCceeEEEEecceEEEEeeCCCeEEEecccCccCcCCCccceEEeecCCceEEEEeeCCEEEE Q lcl|Aclame:pro 126 TEKALSNWPKDKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVTDLEDESKPDRYQPFYRAESQPDGIVSVDAWRDLIVC 205 (477) Q Consensus 126 ~~~~~~~~~~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS~L~d~s~~~~~l~fatAE~~pD~iv~v~~~~~~l~l 205 (477) .-... ..-.|-++.. =+++..|| ||.-.|+..+| |.-.-+-.++....|-+ .+..|++|.+..+-||+ T Consensus 230 pP~~~----~gL~pmP~G~---~~A~faGR-i~~A~Gn~V~F-SEp~~Ph~~~~~~~~~~---~~~~Iv~lapv~~gL~V 297 (396) T protein:vir:10 230 RPAQF----RHLSPMPTGK---HLAYWRGR-LLIARANVLRF-SEALAYHLHDERYGFVQ---MPQRITFVQPVDGGIWV 297 (396) T ss_pred CCccc----cccccCchhH---hhhhhcce-EEEEeCCEEEE-ecCCCCceecchhccCC---CCCceEEEEEecCeEEE Confidence 11111 1123322211 25688899 56677888888 64443311121112221 45689999999999876 Q ss_pred EecceEEEEEecCCCCCceeeEEe-------cccceEeeecccchhheecCCeEEEEecccccCcEEEEccCceeeecCC Q lcl|Aclame:pro 206 FGSSSIEYFTLTGSADTSQPLYIH-------QAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVYLIGAGEKNKIST 278 (477) Q Consensus 206 fG~~TtEvw~~tG~~~~~f~~~~~-------~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy~~~g~q~~rISt 278 (477) .-+.- +|..+|..+-....-+. .++..+|-+|++..|+...+..+.|.|.+ |.+.-+.+++.... + T Consensus 298 gt~~~--~y~~~G~dP~sms~~~l~~~~pvp~S~v~~p~~~~s~rs~~~~~~~~lwas~d----Gl~~g~~~G~v~~l-~ 370 (396) T protein:vir:10 298 GQVDH--VAFLDGADPASLSVSRRASRAPVPGSAVLVPAEVVGTNASPDGSPVAVWLAEN----GYVMGTSSGAIAEV-H 370 (396) T ss_pred EEcCc--EEEEEcCChhHcceeecccCCCcccchhcccchhhhcccccccCcEEEEccCC----cEEEEcCCceeeee-c Confidence 55443 57888887654332222 23445566678999999999999999988 77876677776664 3 Q ss_pred HHHHHHHHhcCccccceeEEEEEEECCEEEEEEE Q lcl|Aclame:pro 279 ATIDKIIRYYSADELAASFMESIRFDNHELLLLH 312 (477) Q Consensus 279 ~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvit 312 (477) . ++|+- ....| +-+.-++..-+..++ T Consensus 371 ~---~~i~p--~~~~A---~~~~~~drRy~~~~~ 396 (396) T protein:vir:10 371 A---GVLAG--ITGRA---GTSVVFDRRLLTAVS 396 (396) T ss_pred c---cccCC--Ccccc---eEEEeecCeEEEEeC Confidence 3 33431 11111 112345666544455 No 40 >protein:vir:100022 Length: 976 # NCBI annotation: T7-like tail tubular protein B # Family: family:all:825 # MgeID: mge:1604 # MgeName: P-SSP7 # Cross-refs: genbank:acc:YP_214208;genbank:gi:61806431;genbank:GeneID:3294702 Probab=25.70 E-value=2 Score=18.90 Aligned_cols=444 Identities=12% Similarity=0.092 Sum_probs=148.4 Q ss_pred Cchhhccceece---eecccccccccccce-eee------------------eeccccccccccc--cc---cccccccc Q lcl|Aclame:pro 1 MLSEVFMPKIQI---PLAKGLVKDIKTADY-IDA------------------LPVNMLATPKEVL--NA---SGYLRSFP 53 (477) Q Consensus 1 ~~~~~~M~~~~i---Pl~~G~~~~~~~~d~-i~~------------------~pvNl~~~~~e~~--~s---~~~L~~~P 53 (477) ...+++-..-.+ +.... ....-..+. ++. .+-.++.+..+.. .+ +..+++.- T Consensus 343 ~~~~~~a~~~~~~~~~t~~d-~~~~~~~~~ia~~L~~~l~a~~~~~g~tv~~~g~~~~i~~~~~~~~~s~~~~~~~~~~~ 421 (976) T protein:vir:10 343 STANVQANLGLIRPNPTPFD-TETAVTAESIIGDIRTAIIATGNFTSANVQQIGTGLYVTRPSGTFNVTAPSSDLLRVMS 421 (976) T ss_pred eceeEEeccccccCcCCcCc-ccccccHHHHHHHHHHhhcccccccceEEEEcCcEEEEEecCcceEecCCCceeEEEEE Confidence 111111100000 00000 000000000 000 0001111000000 00 00111110 Q ss_pred C-cceeeccchheeeEEEeecCCeEEEEECC--ee--Eeeeee-----EE-----eecccccEEEEeCCCeEEEEECCCc Q lcl|Aclame:pro 54 G-IEKKQDAKGVSRGVHFNTKNNALYRVCGN--TL--YRNDKE-----VA-----DIAGMSRVSMSHSSHSQAICFEGKV 118 (477) Q Consensus 54 G-l~~~~~~~g~~rG~~~~~~~g~ly~V~G~--~L--y~v~~~-----iG-----~i~g~g~Vsma~N~~~~~Iv~~g~~ 118 (477) + .....++|.. ..||.+..|..+ +. |.+.+. .| +..+-|.....++.+-+..+..... T Consensus 422 ~~V~~~~~LP~~-------~~~g~~v~V~~~~~~~d~yyv~~~~~~~~~~~~~w~E~~~~g~~~g~~~~tmP~~l~~~~~ 494 (976) T protein:vir:10 422 GEVANVDDLPSQ-------CKHGYVVKVANSEADADDYYVKFFGHNNRDGDGVWEECAKPSRNIEFDKGTMPIQLVRQAN 494 (976) T ss_pred eeecchhhhhhh-------ccCCcEEEEecCCCCceeEEEEeeccccccccceEEEeeccccccccccccccEEEEeccc Confidence 0 0001111111 134445444222 11 111110 00 0111111111122222211111111 Q ss_pred ceEEEEcccceEeecC---cccCCCCCCCceeEEEEecceEEEEeeCCCeEEEe---cccCc-------cCcCCCccceE Q lcl|Aclame:pro 119 KLYRYDGTEKALSNWP---KDKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVT---DLEDE-------SKPDRYQPFYR 185 (477) Q Consensus 119 ~~y~yd~~~~~~~~~~---~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS---~L~d~-------s~~~~~l~fat 185 (477) .-|.+.-....-.... ...+|.+..-.+.+|+|..+|++|.- ...++.| ++.|. ..+|++.+++. T Consensus 495 g~f~~~~~~w~~r~vGd~~tnp~psf~g~~is~v~f~q~RL~f~s--~~~v~~Srtgd~~nF~~~t~~~~~DdD~I~~~~ 572 (976) T protein:vir:10 495 GTFTVSQATWQNAEVGDELTNPNPSFVGKTINQLVFFRNRLVFLS--DENVIMSRPGEFFNFWSKTATTFTPQDVIDLSC 572 (976) T ss_pred CeEEeeeccccccccCCcccCcCceecccccceEEEEcceEEEec--CCeEEEEecCCccccccccccCCCCCccEEEEe Confidence 1111211111111111 12234333334678999999998864 3334445 22222 12566777888 Q ss_pred EeecCCceEEEEeeCCEEEEEecceEEEEEecCCC-CCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcE Q lcl|Aclame:pro 186 AESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSA-DTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPA 264 (477) Q Consensus 186 AE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~-~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~ 264 (477) +..+++.|.-++++++.|+||....- |..+|+. .....-.+.. ..=..+|...-.-..+++++++++... +--. T Consensus 573 ss~~~~~i~~~v~~~~~L~l~T~g~e--~~lsg~~~~lTP~t~~i~--~~s~~~~~~~v~Pv~vG~~v~Fv~~~g-~~~r 647 (976) T protein:vir:10 573 SSTYPAIVYDGIQVNAGLLLFTKNQQ--FMLTTDSDILSPETAKIN--AVSSYNFNEKTHPVSLGTTVAFIDNAN-QFTR 647 (976) T ss_pred cCCcceeeEEEEecCCcEEEEecCce--EEEecCCceecceeEEEE--EEEeeeccCCCccEEeCCeEEEEecCC-CeEE Confidence 88889999999999999977776655 6667754 2321111111 111358988888899999999997652 1123 Q ss_pred EEEc------cCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcC-CeEEE--Ee-----ccccCccee Q lcl|Aclame:pro 265 VYLI------GAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLP-KHTLC--FD-----GSASHQYSQ 330 (477) Q Consensus 265 Vy~~------~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP-~~Tw~--yD-----~~t~~Wher 330 (477) ++.. .++.++.+ |.-+++.|. -.. .++ +++.+.+.+.....- +.-+| |- -.-.-|| | T Consensus 648 ~~~~~~~~~~~~~~~~dl-t~~~~~l~~----g~~--~~~-a~~~~~~~vv~~~~~~g~l~~~ty~~~~~eq~v~aWs-r 718 (976) T protein:vir:10 648 FFEMSNVVRQGEPDVVDQ-SKVISRLLD----KNI--SLV-SVSRENSVVFFSQKDTDKIYCFRYFTSGEKRLLQAWT-T 718 (976) T ss_pred EEEEeecccccccchhHH-HHHhhhhcC----Cce--EEE-EEcCCCcEEEEEEcCCCEEEEEEEeecCCceeEEeeE-E Confidence 3333 23333344 233344343 221 222 577888876555543 44444 31 1223677 4 Q ss_pred eEEecCCCcccceEEEEEEEeCCeEEEEEcC-CCeEEEEcCCCcccCCCEeeEEEeeceec-cCCceEE---EEEEEEEe Q lcl|Aclame:pro 331 WSLLKSGFYDEPYRAIDFMFFDNQITVGDKK-EGVLGHLIFNASNQYEQQTEHLLYTPMIK-ADNARLF---DFELEAST 405 (477) Q Consensus 331 ~s~~~~~~~~~r~Ra~~~~~~~g~~~vGD~~-~g~l~~Ld~~~~td~G~~i~~~~~tP~~~-~~~~R~~---~~ele~~~ 405 (477) |-+ ....+..|++ .+.-|++=.+. +|.+.++... ..+.+...+....++-.. ....|++ ..++.+.. T Consensus 719 ~~~------~G~v~sv~~i-~D~ly~vV~r~~~g~~~r~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~~~~~~~~ 790 (976) T protein:vir:10 719 WTI------TGNIQYHCML-DDALYVVTRNNNKDQIVKYSLK-LDDAGHFVTDTQGTTSTDDDSIYRVHLDHSSSVTAAS 790 (976) T ss_pred Eec------CCcEEEEEEe-CCeEEEEEEecCCeEEEEEEEE-ECCccceeeeccCccccccCCcceeeeccceEEEecc Confidence 644 2345665544 34444443332 3444433222 111222222111111100 0011111 01111111 Q ss_pred CCCC---------------CCceEEE-------------EeeeCc-c-----ccCcceEeccCCCc-------------- Q lcl|Aclame:pro 406 GVAQ---------------IADKLFL-------------SVTTDG-I-----NYSREQLIEQNSPF-------------- 437 (477) Q Consensus 406 Gvgq---------------~~~~v~l-------------~~SdDG-~-----tws~~~~~~~g~~g-------------- 437 (477) |+-. ...++-+ +.+-+| . +|+.. .+-+|-+. T Consensus 791 ~t~~~~t~~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~g~~i~l~g~~~~~-~v~VGl~Y~s~~~~~~~~i~~~ 869 (976) T protein:vir:10 791 NTYNTTTIKTTIPKPNGYESTKQLVAYDTDAGNDLGRYALVTVSGSNLEIPGNWSNN-SFIIGYLYEMDVQLPTLYVTQQ 869 (976) T ss_pred ccccCCceeEEeecCccccCceeEEEEecccCcccccceeeeecCCeeEecCCCCCC-eEEEeeeeEEEEeecceeEEeC Confidence 1100 0001111 001111 0 11111 11122221 Q ss_pred -------eeceeEEEEEeee-ccceeeEEEEEEeeCCee-EE-----------EEEEEe--C Q lcl|Aclame:pro 438 -------QYDKRILWRRIGR-VRKNIGFKIRIITKSPVT-LS-----------DLSIRM--E 477 (477) Q Consensus 438 -------~~~~r~~~~RlG~-~~~~vgf~~r~~~~~~v~-l~-----------~~~~~~--E 477 (477) +..-|++.||+=- ..+-.+|++.+....+.. .. +..+.+ + T Consensus 870 ~g~~~~~~~~gRl~i~r~~~~~~~tg~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~ 931 (976) T protein:vir:10 870 VGDKYRSDAKSSLIVHRIKFSFGPLGVYSTTIQRDGKPDFTETKELGLAGVVGASRLPIVPE 931 (976) T ss_pred CCCcccccceeeEEEEEEEEEeecccceEEEEcCCCCccccccccccccCcccccccceecC Confidence 1111222111000 000001222221111100 00 000000 0 No 41 >protein:vir:105647 Length: 800 # NCBI annotation: putative tail tubular B protein # Family: family:all:825 # MgeID: mge:1674 # MgeName: K1E # Cross-refs: genbank:acc:YP_425011;genbank:gi:83571759;uniprot:Q2WC41;genbank:GeneID:3837288 Probab=25.46 E-value=2.1 Score=18.87 Aligned_cols=446 Identities=10% Similarity=0.084 Sum_probs=149.6 Q ss_pred Cchhhccceeceeecccccccccccc--eee-ee--------ecccccccccccccccccccccCcc------------- Q lcl|Aclame:pro 1 MLSEVFMPKIQIPLAKGLVKDIKTAD--YID-AL--------PVNMLATPKEVLNASGYLRSFPGIE------------- 56 (477) Q Consensus 1 ~~~~~~M~~~~iPl~~G~~~~~~~~d--~i~-~~--------pvNl~~~~~e~~~s~~~L~~~PGl~------------- 56 (477) .+....=+.-..|-.. ......+.+ ++. ++ .+|-+ ..+...+.-++.+..|.. T Consensus 165 ~i~g~~~~~~~t~~~~-~~~~~~~~s~~~i~~~L~~~l~~~~~~~~~--t~~~~g~~i~i~~~~~~~~~~~~~~~~~~~~ 241 (800) T protein:vir:10 165 IINGTTAASFKTPDGG-SAEHVEQIRTERITSELYSKLQQWSGVNDY--EIQRDGTSIFIERRDGKSFTVTTTDGAKGKD 241 (800) T ss_pred EeccceEEEEEecCCC-cccccccccHHHHHHHHHhhhhhcCcccce--EEEEcCcEEEEEEecCCceEEEEeecCCcce Confidence 0000000000000000 000000000 000 00 00000 000000000111101100 Q ss_pred --ee-------eccchhe-eeEE------EeecCCeEEEEE-----CCeeEeeeeeEEeecccccEEEEeCCCeEEEE-E Q lcl|Aclame:pro 57 --KK-------QDAKGVS-RGVH------FNTKNNALYRVC-----GNTLYRNDKEVADIAGMSRVSMSHSSHSQAIC-F 114 (477) Q Consensus 57 --~~-------~~~~g~~-rG~~------~~~~~g~ly~V~-----G~~Ly~v~~~iG~i~g~g~Vsma~N~~~~~Iv-~ 114 (477) .+ .+++... .|.. -...+..-|+.- +.+.+.-+..-|.+.+...=.|.+--....+. . T Consensus 242 ~~~~~~~v~~~~~Lp~~~~~g~~~~i~~~~~~~~~~y~~~~~~~~~~~~~w~e~~~~~~~~~~~~~tmp~~lv~~~~~~~ 321 (800) T protein:vir:10 242 LVAIKNKVSSTDLLPSRAPAGYKVQVWPTGSKPESRYWLQAEPKEGNLVSWKETIAADVLLGFDKGTMPYIIERTGIIDG 321 (800) T ss_pred EEEEEeeccceeeccccCCCCceEEEEcCCCCCCceeEEEEEeccccceEEEeecccCceeeeecccccEEEEEeeeeec Confidence 00 0011000 0000 000111111110 00111111111111111111111100000010 0 Q ss_pred CCCcceEEEEcccceEeecCcccCCCCCC----CceeEEEEecceEEEEeeCCCeEEEe---cccCc-------cCcCCC Q lcl|Aclame:pro 115 EGKVKLYRYDGTEKALSNWPKDKYPQYDL----GEVIDVCRNRGRYIWLQKGGERFGVT---DLEDE-------SKPDRY 180 (477) Q Consensus 115 ~g~~~~y~yd~~~~~~~~~~~~~~p~~~~----~~~~dv~~~dgyfV~~~~g~~~~~iS---~L~d~-------s~~~~~ 180 (477) ++..+.+..|-+.......+....|.+-. ..+.+|+|..+|++|.-| ..++.| ++.|. ..+|++ T Consensus 322 ~~~~~~~~~~w~~r~~gd~~tnp~psf~~~~~~~~i~~v~f~q~RL~f~~~--~~v~~Srtgd~~nF~~~t~~~~~DdD~ 399 (800) T protein:vir:10 322 IAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTIGGMFMVQNRLCFTAG--EAVIASRTSYFFDFFRYTVISALATDP 399 (800) T ss_pred ceeEEEEeccccccccCCCCCCCCchhcCCCCCCCceeEEEEeeeEEEeeC--CeEEEEccCCccccccccccCCCCCcc Confidence 11211111122221111111122222111 136789999999988642 333334 22222 235667 Q ss_pred ccceEEeecCCceEEEEeeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccc Q lcl|Aclame:pro 181 QPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQST 260 (477) Q Consensus 181 l~fatAE~~pD~iv~v~~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~ 260 (477) -+++.+..+++.|.-++++++.|+||....- |..+|+......-.+.. ..=..+|...-.-..+++++++++.. T Consensus 400 I~~~~ss~~~~~i~~~v~~~~~L~l~T~g~q--~~l~g~~~lTP~~~~i~--~~s~~~~~~~~~Pv~vG~~v~Fv~~~-- 473 (800) T protein:vir:10 400 FDIFSDASEVYQLKHAVTLDGATVLFSDKSQ--FILPGDKPLEKSNALLK--PVTTFEVNNKVKPVVTGESVMFATND-- 473 (800) T ss_pred EEEEEcCCcceeeeeEeecCCcEEEEecCcE--EEEeCCCcccceeEEEE--EEEeeeccCCCCceEeCCeEEEecCC-- Confidence 7788888888999989999999988876655 77788653332111111 11134898888888999999999865 Q ss_pred cCc-EEE------EccCceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcC-CeEEEEe-------cccc Q lcl|Aclame:pro 261 GQP-AVY------LIGAGEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLP-KHTLCFD-------GSAS 325 (477) Q Consensus 261 g~~-~Vy------~~~g~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP-~~Tw~yD-------~~t~ 325 (477) |.- .|+ ..++|+++.+|-| ++..|++ .-.+ +.+.+.+.+.++....- +.-++|- -.-. T Consensus 474 g~~s~vre~~~~~~~d~~~a~DlT~~-~~hl~~~-~v~~-----~~~~~~~~~~v~~~~~~~~~l~~~~yl~~~~e~~~~ 546 (800) T protein:vir:10 474 GSYSGVREFYTDSYSDTKKAQAITSH-VNKLIEG-NITN-----MAASTNVNRLLVTTDKYRNIIYCYDWLWQGTDRVQS 546 (800) T ss_pred CCeeEEEEEeeeecccceehhhHHhH-HHHhcCC-ceEE-----EEEeCCCCeEEEEEEcCCCeEEEEEEeecCCceEEE Confidence 321 243 3466788887544 4555643 1111 21233455544433333 3433432 1123 Q ss_pred CcceeeEEecCCCcccceEEEEEEE-eCCeEEEEEcCCCeEE-EEcCCCcccCCCEee-EEE--eece------------ Q lcl|Aclame:pro 326 HQYSQWSLLKSGFYDEPYRAIDFMF-FDNQITVGDKKEGVLG-HLIFNASNQYEQQTE-HLL--YTPM------------ 388 (477) Q Consensus 326 ~Wher~s~~~~~~~~~r~Ra~~~~~-~~g~~~vGD~~~g~l~-~Ld~~~~td~G~~i~-~~~--~tP~------------ 388 (477) -|| ||-+.. .....++++ .+.-|++=+..++... +|+.....+.+.+.. ++- .++. T Consensus 547 aW~-~w~~~~------~~~~~~~~~~~d~l~~iv~r~~~~~ier~~~~~~~~~~~~~~~~lD~~~~~~~~~~~~~~~~~~ 619 (800) T protein:vir:10 547 AWH-VWEWPM------GTKVRGMFYSGELLYLLLERGDGVYLEKMDMGDALTYGLNDRIRMDRQAELIFKHFKAEDEWIS 619 (800) T ss_pred EEE-EEEcCC------CcEEEEEEEeCCeEEEEEECCCcEEEEEEecccCccccccceeeeecceeecccccccCcceEE Confidence 566 354311 112233333 4555666666554332 244433333333321 110 0111 Q ss_pred -----eccCCceEEEEEEEEEeCCCCC-CceEE--EEeeeCccccCcc--------eEeccCCCce-------------- Q lcl|Aclame:pro 389 -----IKADNARLFDFELEASTGVAQI-ADKLF--LSVTTDGINYSRE--------QLIEQNSPFQ-------------- 438 (477) Q Consensus 389 -----~~~~~~R~~~~ele~~~Gvgq~-~~~v~--l~~SdDG~tws~~--------~~~~~g~~g~-------------- 438 (477) .+.++..+..+++ .|..+. +..++ ..+.++++++-.+ ..+-+|.+-+ T Consensus 620 ~~~~~~~~~~~~~~~~~~---~~~~~~~~g~v~~~~~~~~g~~~~~~~~~~g~~~~~~v~VGl~Y~s~~~~~~~~i~~~~ 696 (800) T protein:vir:10 620 EPLPWTPTNPELLDCILI---EGWDSYIGGSFLFKYKPSDNTLSTTFDMHDDNHVKAKVIVGQIYPQEFEPTPVVIRDRQ 696 (800) T ss_pred EeccccccCCcceEEeee---ccceeecCceeEEEEEecCCceEeeeeecCCCcccceEEEeeeeeEEEeecceEEEcCC Confidence 1111111111111 111110 11111 2223333333211 0122222100 Q ss_pred ----eceeEEEEE----eeeccceeeEEEEEEeeCC--ee-------EEEEEEE-e---C Q lcl|Aclame:pro 439 ----YDKRILWRR----IGRVRKNIGFKIRIITKSP--VT-------LSDLSIR-M---E 477 (477) Q Consensus 439 ----~~~r~~~~R----lG~~~~~vgf~~r~~~~~~--v~-------l~~~~~~-~---E 477 (477) ...|.+.+| +.+. -+|++++....+ +. +.+.... + + T Consensus 697 g~~~~~~r~~i~r~~~~~~~s---g~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 753 (800) T protein:vir:10 697 DRVSYIDVPVVGLVHLNLDMY---PDFSVEVKNVKSGKVRRVLASNRIGGALNNTVGYVE 753 (800) T ss_pred CcccccCCeEEEEEEEEeecC---ceEEEEeccCcccceeEEccCCeeccccccccCccc Confidence 011111111 1111 123333322211 10 0000000 0 0 No 42 >protein:vir:6326 Length: 826 # NCBI annotation: tail tubular protein B # Family: family:all:825 # MgeID: mge:132 # MgeName: phiKMV # Cross-refs: genbank:acc:NP_877473;genbank:gi:33300845;uniprot:Q7Y2D1;genbank:GeneID:1482615 Probab=23.94 E-value=2.2 Score=18.66 Aligned_cols=442 Identities=13% Similarity=0.073 Sum_probs=161.0 Q ss_pred Cchhhccceeceee-----cccccccccccceeeee---eccccccccc-----------cccccccccc-ccCcceeec Q lcl|Aclame:pro 1 MLSEVFMPKIQIPL-----AKGLVKDIKTADYIDAL---PVNMLATPKE-----------VLNASGYLRS-FPGIEKKQD 60 (477) Q Consensus 1 ~~~~~~M~~~~iPl-----~~G~~~~~~~~d~i~~~---pvNl~~~~~e-----------~~~s~~~L~~-~PGl~~~~~ 60 (477) ...-.+...++-+. ...........+++-.. .+...++... ...+..-|-. .|... T Consensus 225 ~~~t~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~p~~~---- 300 (826) T protein:vir:63 225 PNSTKKYPKVDPDANAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATADLPALLPGVG---- 300 (826) T ss_pred CCCccccceecCCcccceeecceeEecccccEEEEeeCCcccEEEccCCCCcceEEEEEeeccceeeccccCCCcc---- Confidence 11111111111111 11000000011111100 0000000000 0000000100 01100 Q ss_pred cchhe-eeEEEe-----ecCCeEEEE--ECCeeEeeeeeEEee--cccccEEEEeCCCeEEEEECCCcceEEEEcccce- Q lcl|Aclame:pro 61 AKGVS-RGVHFN-----TKNNALYRV--CGNTLYRNDKEVADI--AGMSRVSMSHSSHSQAICFEGKVKLYRYDGTEKA- 129 (477) Q Consensus 61 ~~g~~-rG~~~~-----~~~g~ly~V--~G~~Ly~v~~~iG~i--~g~g~Vsma~N~~~~~Iv~~g~~~~y~yd~~~~~- 129 (477) .+|.+ .+.+.. ..+...|+. ..++.|+-+..-|.. ..+.|+-+++| .....|.+...... T Consensus 301 ~~~~~~~~~~~~~~~~g~~~d~~y~~~~~~~~~w~e~~~~~~~~~~~tmp~~l~~~---------~~~~~f~~~~~~w~~ 371 (826) T protein:vir:63 301 APGVGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWD---------EATDTYSLNELEYDR 371 (826) T ss_pred cceEEEeeEEeEEecCCCcccceEEEEEcCCceEEEEeecCcccccccceEEEEEe---------ccCCeEEEecccccc Confidence 00000 000000 011112211 122222211111111 11222222222 11122333222111 Q ss_pred --EeecCcccCCCCCCCceeEEEEecceEEEEeeCCCeEEEe---cccCc-------cCcCCCccceEEeecCCceEEEE Q lcl|Aclame:pro 130 --LSNWPKDKYPQYDLGEVIDVCRNRGRYIWLQKGGERFGVT---DLEDE-------SKPDRYQPFYRAESQPDGIVSVD 197 (477) Q Consensus 130 --~~~~~~~~~p~~~~~~~~dv~~~dgyfV~~~~g~~~~~iS---~L~d~-------s~~~~~l~fatAE~~pD~iv~v~ 197 (477) .-..+.+.+|.+-...+.+|+|..+|++|.-| ..++.| ++.|. ..+|++-+++.+..+++.|.-++ T Consensus 372 r~~Gd~~tnp~psf~g~~~~~v~f~q~RL~f~~~--~~v~~Srtgd~~nF~~~s~~~~~DdD~I~~~~ss~~~~~i~~~v 449 (826) T protein:vir:63 372 RGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQ--EYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAV 449 (826) T ss_pred ccccccccCCCccccCCCceEEEEEeceEEEeeC--CeEEEEccCCccccccccccCCCCCccEEEEEcCCcceeeEEEe Confidence 11222344555544567899999999988643 333334 22221 23566777888888888998999 Q ss_pred eeCCEEEEEecceEEEEEecCCCCCceeeEEecccceEeeecccchhheecCCeEEEEecccccCcEEEE-------ccC Q lcl|Aclame:pro 198 AWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCRYQDKYAILSHQSTGQPAVYL-------IGA 270 (477) Q Consensus 198 ~~~~~l~lfG~~TtEvw~~tG~~~~~f~~~~~~~~~~i~~Gcaa~~s~~~~~~s~~wlg~d~~g~~~Vy~-------~~g 270 (477) ++++.|+||....- |..+|+......-.+.. ..=..+|.+.-.-..+++++++++.....--.|+. -+. T Consensus 450 ~~~~~L~l~T~~~q--~~ls~~~~lTP~~~~i~--~~s~~~~~~~~~Pv~vG~~v~Fv~~~g~~~s~v~e~~~~~d~~~~ 525 (826) T protein:vir:63 450 TFNKDLIVFAKKYQ--AVVPGGGIVTPRTAVIS--ITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSH 525 (826) T ss_pred ecCCcEEEEecCcE--EEEeCCCcccceeEEEE--EEEeecccCCCCceEeCCeEEEEecCCCceeEEEEEEeeeccccc Confidence 99999988866655 77788654432111111 11135788877778999999999853110012322 223 Q ss_pred ceeeecCCHHHHHHHHhcCccccceeEEEEEEECCEEEEEEEcCC-eEEEEe-------ccccCcceeeEEecCCCcccc Q lcl|Aclame:pro 271 GEKNKISTATIDKIIRYYSADELAASFMESIRFDNHELLLLHLPK-HTLCFD-------GSASHQYSQWSLLKSGFYDEP 342 (477) Q Consensus 271 ~q~~rISt~~IE~~i~~y~~~e~a~a~a~s~~~~GH~fyvitfP~-~Tw~yD-------~~t~~Wher~s~~~~~~~~~r 342 (477) |+++.+|-| +.+.|.+ .+. .. +++.+-+..+....-+ .-+||- -.-.-|| ||-+. .+ T Consensus 526 y~~~dlt~~-~~~l~~~--~v~---~~--a~s~~~~~v~~~~~~dg~l~~~~y~~~~~e~~v~aW~-~~~~~------g~ 590 (826) T protein:vir:63 526 YVAEDVTSH-IPSYMPG--PAE---YI--QAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFH-RWTLR------HQ 590 (826) T ss_pred eehhHHHHH-HHHhcCC--CeE---EE--EEcCCCCEEEEEEcCCCEEEEEEEeeCCCcEEEEeEE-EEecC------Cc Confidence 566666444 3444542 121 11 4566666555555443 333332 1123576 45442 24 Q ss_pred eEEEEEEEeCCeEEEEEcC-CCeEEEEcCCC-----cccCC-CEeeE---------------EEeeceeccCCceE---- Q lcl|Aclame:pro 343 YRAIDFMFFDNQITVGDKK-EGVLGHLIFNA-----SNQYE-QQTEH---------------LLYTPMIKADNARL---- 396 (477) Q Consensus 343 ~Ra~~~~~~~g~~~vGD~~-~g~l~~Ld~~~-----~td~G-~~i~~---------------~~~tP~~~~~~~R~---- 396 (477) ..+.|++ .+.-|++=.+. ++.+-+++.+. ..+++ ++..+ ....++=+.+..-+ T Consensus 591 v~~~~~i-~d~l~~iv~r~~~~~~~r~~~e~~~~~~~~~~~~~d~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (826) T protein:vir:63 591 IIGAYFT-GDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVAGELELTKQHWDLIKDASAVYQLQPVA 669 (826) T ss_pred EEEEEEE-CCeEEEEEEeCCCEEEEEEEEEecCCccccccCCccceEEEEEeeeeeeccCcceeecccCcccccEEEEee Confidence 4544444 34443432222 23333332110 00000 00000 00000000111000 Q ss_pred -------------E---EEEEEE---------EeCCCCC----CceEEEEeeeC-ccccCcce----EeccCCCceece- Q lcl|Aclame:pro 397 -------------F---DFELEA---------STGVAQI----ADKLFLSVTTD-GINYSREQ----LIEQNSPFQYDK- 441 (477) Q Consensus 397 -------------~---~~ele~---------~~Gvgq~----~~~v~l~~SdD-G~tws~~~----~~~~g~~g~~~~- 441 (477) . ..+|++ ..|..-. -++.+++...+ +.+=++-| .+++++.|.+.- T Consensus 670 ~~~~~~~~~~~~~~~~g~v~l~~~~~~~~~~v~VGl~y~s~~~~~~~~~~~~~g~~~~~gr~~l~r~~~~~~~tg~~~v~ 749 (826) T protein:vir:63 670 GAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWR 749 (826) T ss_pred CccccCCccceEEecCCEEEEecCCCccccEEEEeeeeeEEEEecceEEEccCCCcceeccEEEEEEEEEeeccccEEEE Confidence 0 011211 1122110 12233332222 32222211 122222222211 Q ss_pred ------------eEEEEEeeecc-------------------ceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 442 ------------RILWRRIGRVR-------------------KNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 442 ------------r~~~~RlG~~~-------------------~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) +..=+|+|-.. ++...++++....|.+++...+..| T Consensus 750 v~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~~t~~~~vP~~~~~~~~~i~i~~d~P~p~~il~i~~~ 816 (826) T protein:vir:63 750 ISDTARPNQPWYDTTPLRLFSRQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYN 816 (826) T ss_pred ecCccccceeEeecCCceecccccccccccccceEEEEEEeeccceEEEEEEeCCCCcEEEEEEEEE Confidence 11111222110 1112345666666666666666666 No 43 >protein:vir:1890 Length: 110 # NCBI annotation: gp9 # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:41 # MgeName: HK022 # Cross-refs: genbank:acc:NP_037670;genbank:gi:9634128;genbank:GeneID:1262503 Probab=23.90 E-value=0.99 Score=20.61 Aligned_cols=40 Identities=13% Similarity=0.119 Sum_probs=29.9 Q ss_pred cCCCceeceeEEEEEeeecccee-eEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 433 QNSPFQYDKRILWRRIGRVRKNI-GFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 433 ~g~~g~~~~r~~~~RlG~~~~~v-gf~~r~~~~~~v~l~~~~~~~E 477 (477) |. +|+.++|+.++|....++-. |... ..-+.+.-|||.++ T Consensus 1 M~-~G~L~~rI~i~~~~~~~d~~~G~~~----~~~~~~~~~wA~v~ 41 (110) T protein:vir:18 1 MQ-AGKLRHRITLQEPVKVQNPTTGAVI----NTWRDVATVRAEVS 41 (110) T ss_pred CC-ccccCccEEEEeeeeeecCCCCccc----cceeeeEEEEEEEE Confidence 43 79999999999999887753 4332 34567788899988 No 44 >protein:vir:100134 Length: 109 # NCBI annotation: gp8 # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1639 # MgeName: phi1026b # Cross-refs: genbank:acc:NP_945038;genbank:gi:38707898;genbank:GeneID:2744181 Probab=23.74 E-value=1.3 Score=19.98 Aligned_cols=42 Identities=12% Similarity=0.010 Sum_probs=32.4 Q ss_pred cCCCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 433 QNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 433 ~g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) |=++|+.++|+.++|.-..++-.|..+. ..-+.+.-|||.++ T Consensus 1 mm~~G~L~~rI~i~~~~~~~d~~G~~~~---~~w~~~~~~wA~v~ 42 (109) T protein:vir:10 1 MLKAGELTERITIEKRGGGVNENGEPLP---GDWVEHASVWANVR 42 (109) T ss_pred CCCccccCccEEEEeeeeeeCCCCCeec---cceEEEEEEEEEEE Confidence 5566889999999999998887775332 23467788999999 No 45 >protein:vir:81177 Length: 109 # NCBI annotation: putative head-tail adaptor # Family: family:all:116 # ACLAME annotation(s): phi:0000012 - phage head tail joining # MgeID: mge:1892 # MgeName: Geobacillus virus E2 # Cross-refs: genbank:acc:YP_001285814;genbank:gi:148747735;genbank:GeneID:5247220 Probab=20.49 E-value=1.7 Score=19.37 Aligned_cols=40 Identities=15% Similarity=0.192 Sum_probs=30.9 Q ss_pred CCCceeceeEEEEEeeeccceeeEEEEEEeeCCeeEEEEEEEeC Q lcl|Aclame:pro 434 NSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRME 477 (477) Q Consensus 434 g~~g~~~~r~~~~RlG~~~~~vgf~~r~~~~~~v~l~~~~~~~E 477 (477) =++|+.++|+.++|.-..++-.|... .....+.-|||.++ T Consensus 1 M~~g~L~~rI~i~~~~~~~d~~G~~~----~~w~~~~~~wA~v~ 40 (109) T protein:vir:81 1 MNPGQFRHKITLMKLVTTQDEIGNTI----EEWQPVRTCWAAIK 40 (109) T ss_pred CCccccCccEEEEeeeeeeCCCCCee----cceeeEEEEEEEEE Confidence 23799999999999988887766543 35667778999998 Done!