Dock3DinDepth
docking isosurfaces into AFM|SAXS|cryoEM envelopes
1. Input
Please, fill-in the two lines below FIRST
AFM
SAXS
cryoEM
envelope
(
.pdb
) :
object
:
structure (.pdb)
isosurface (.grid)
Adepth
atomic
depth
in Å :
surface
density
:
docking
favorable
region in Å :
(
under
AFM surface)
forbidden
region in Å :
(
above
AFM surface)
grid size
:
16
32
64
128
256
resolution
(XY, Z) in Å :
rotation step
in deg :
06
08
10
12
20
72
90
3D
node radius
in Å :
2. Output
Enter a valid e-mail address where we can send a link to the results when the run is completed.
E-mail :
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Download:
user manual
example AFM
example SAXS
example cryoEM
tools
RC Chaves JL Pellequer (2013)
Comment and request:
Coordinator