1. Input

Please, fill-in the two lines below FIRST

number of subunits to combine : 2 3 4 5
number of distance constraints : 1 2 3 4 5 6 7 8 9 10
AFM image (.txt) :
Image is eroded :	tip (*.txt)

Enter subunit PDB files and their associated .e6d files :
structure (.pdb) : docking result (.e6d) :
number of docking solutions to consider :
constraints
bumps range in Å :      bumps number :
Enter distance constraints (values, fromXYZ, toXYZ) :
subunits    distance (Å) :    ref. point in a (Å) :    ref. point in b (Å) : a b    min ideal max    X Y Z    X Y Z 1 2 1 2
combine
score z threshold : (=T-L) in Å
coarse filter : (distance (Å), angle(°))
fine filter : (distance (Å), angle(°))

2. Output

Enter a valid e-mail address where we can send a link to the results when the run is completed.
E-mail :  Invalid email address email is mandatory



 

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Download:

user manual example

RC Chaves JL Pellequer (2013)

Comment and request:
Coordinator